Amniota	ANCESTRAL SPECIES	1	ENSGT00940000157136 #19	ENSGT00950000183021.b	ENSGT00500000044959	ENSGT00390000016702	ENSGT00940000156549.a.a	ENSGT00940000157133	ENSGT00390000002143.b	ENSGT00390000016811	ENSGT00940000164041	ENSGT01030000234597.a.b.a #37	ENSGT00940000160868 #35	ENSGT00940000157269.a.a #34	ENSGT00940000158299 #33	ENSGT00940000158614 #31	ENSGT00510000049722 #29	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00950000185082	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00390000017237	ENSGT00940000158248.b	ENSGT00940000161840	ENSGT00390000018634	ENSGT00940000155086.C	ENSGT00940000153804.A	ENSGT00940000161541	ENSGT01030000234626.A.b
Mammalia	ANCESTRAL SPECIES	142																ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00950000185082	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28
Theria	ANCESTRAL SPECIES	75																ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00950000185082	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37
Eutheria	ANCESTRAL SPECIES																	ENSGT00390000007091 #22
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00950000185466	ENSGT00940000158598 #25	ENSGT00950000185082	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105
Euarchontoglires	ANCESTRAL SPECIES	24	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00950000185466	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Euarchontoglires_A	ANCESTRAL SPECIES	25	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00950000185466	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Glires	ANCESTRAL SPECIES	26	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00950000185466	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b
Rodentia	ANCESTRAL SPECIES	21	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00950000185466	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105
Rodentia_B	ANCESTRAL SPECIES	24	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Myomorpha	ANCESTRAL SPECIES	29	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Muroidea	ANCESTRAL SPECIES	26	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Muroidea_A	ANCESTRAL SPECIES	10	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Cricetidae	ANCESTRAL SPECIES	15	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Cricetinae	ANCESTRAL SPECIES	18	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Chinese hamster chok1gshd	MODERN SPECIES	3	4930578I06Rik (ENSCGRG00001002855) #7	Rp1l1 (ENSCGRG00001000883) #8	Prss55 (ENSCGRG00001012725) #9	Prss51 (ENSCGRG00001017289) #10	Prss52 (ENSCGRG00001022178) #11	Msra (ENSCGRG00001014400) #12	Kif13b (ENSCGRG00001002755) #13	Hmbox1 (ENSCGRG00001006124) #14	Ints9 (ENSCGRG00001024549) #15	Extl3 (ENSCGRG00001009621) #16	Fzd3 (ENSCGRG00001017329) #17	Fbxo16 (ENSCGRG00001016357) #18	Zfp395 (ENSCGRG00001018152) #19	Pnoc (ENSCGRG00001020999) #20	Elp3 (ENSCGRG00001002047) #21	Nuggc (ENSCGRG00001024841) #22	Scara5 (ENSCGRG00001004427) #23	Pbk (ENSCGRG00001007773) #24	Esco2 (ENSCGRG00001016894) #25	Ccdc25 (ENSCGRG00001014249) #26	Scara3 (ENSCGRG00001018699) #27	Clu (ENSCGRG00001021841) #28	Gulo (ENSCGRG00001019987) #29	Adam2 (ENSCGRG00001012300) #30	Ephx2 (ENSCGRG00001003555) #31	ENSCGRG00001003198 #32	Chrna2 (ENSCGRG00001025060) #33	Ptk2b (ENSCGRG00001013042) #34	Trim35 (ENSCGRG00001019610) #35	ENSCGRG00001009280 #36	Stmn4 (ENSCGRG00001008937) #37
Golden Hamster	MODERN SPECIES	670	4930578I06Rik (ENSMAUG00000015281) #7	Rp1l1 (ENSMAUG00000006210) #8	Prss55 (ENSMAUG00000003349) #9	Prss51 (ENSMAUG00000019793) #10	Prss52 (ENSMAUG00000020307) #11	Msra (ENSMAUG00000002110) #12	Kif13b (ENSMAUG00000016652) #13	Hmbox1 (ENSMAUG00000017893) #14	Ints9 (ENSMAUG00000016286) #15	Extl3 (ENSMAUG00000013025) #16	Fzd3 (ENSMAUG00000020808) #17	Fbxo16 (ENSMAUG00000014801) #18	ENSMAUG00000019639 #19	Pnoc (ENSMAUG00000005940) #20	Elp3 (ENSMAUG00000013672) #21	Nuggc (ENSMAUG00000014486) #22	Scara5 (ENSMAUG00000012698) #23	Pbk (ENSMAUG00000000786) #24	Esco2 (ENSMAUG00000018840) #25	Ccdc25 (ENSMAUG00000018478) #26	Scara3 (ENSMAUG00000008370) #27	Clu (ENSMAUG00000001027) #28	Gulo (ENSMAUG00000013257) #29	Adam2 (ENSMAUG00000021964) #30	Ephx2 (ENSMAUG00000010745) #31	Chrna2 (ENSMAUG00000009044) #33	Ptk2b (ENSMAUG00000018808) #34	Trim35 (ENSMAUG00000010808) #35	Stmn4 (ENSMAUG00000012567) #37	Adra1a (ENSMAUG00000019248)	Dpysl2 (ENSMAUG00000006007)
Murinae	ANCESTRAL SPECIES	16	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Mus	ANCESTRAL SPECIES	8	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT01030000234551.k.d.a.c	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Mus_A	ANCESTRAL SPECIES	12	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT00860000136174
Mus_B	ANCESTRAL SPECIES	11	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT00860000136174
Mouse	MODERN SPECIES	5	4930578I06Rik (ENSMUSG00000021961) #7	Rp1l1 (ENSMUSG00000046049) #8	Prss55 (ENSMUSG00000034623) #9	Prss51 (ENSMUSG00000052099) #10	Prss52 (ENSMUSG00000021966) #11	Msra (ENSMUSG00000054733) #12	Kif13b (ENSMUSG00000060012) #13	Hmbox1 (ENSMUSG00000021972) #14	Ints9 (ENSMUSG00000021975) #15	Extl3 (ENSMUSG00000021978) #16	Fzd3 (ENSMUSG00000007989) #17	Fbxo16 (ENSMUSG00000034532) #18	Zfp395 (ENSMUSG00000034522) #19	Pnoc (ENSMUSG00000045731) #20	Elp3 (ENSMUSG00000022031) #21	Nuggc (ENSMUSG00000061356) #22	Scara5 (ENSMUSG00000022032) #23	Pbk (ENSMUSG00000022033) #24	Esco2 (ENSMUSG00000022034) #25	Ccdc25 (ENSMUSG00000022035) #26	Scara3 (ENSMUSG00000034463) #27	Clu (ENSMUSG00000022037) #28	Gulo (ENSMUSG00000034450) #29	Adam2 (ENSMUSG00000022039) #30	Ephx2 (ENSMUSG00000022040) #31	Chrna2 (ENSMUSG00000022041) #33	Ptk2b (ENSMUSG00000059456) #34	Trim35 (ENSMUSG00000022043) #35	Stmn4 (ENSMUSG00000022044) #37	Adra1a (ENSMUSG00000045875)	Dpysl2 (ENSMUSG00000022048)
Ryukyu mouse	MODERN SPECIES	5	4930578I06Rik (MGP_CAROLIEiJ_G0019411) #7	Rp1l1 (MGP_CAROLIEiJ_G0019412) #8	Prss55 (MGP_CAROLIEiJ_G0019413) #9	MGP_CAROLIEiJ_G0019414	Prss52 (MGP_CAROLIEiJ_G0019415) #11	Msra (MGP_CAROLIEiJ_G0019416) #12	Kif13b (MGP_CAROLIEiJ_G0019417) #13	Hmbox1 (MGP_CAROLIEiJ_G0019418) #14	Ints9 (MGP_CAROLIEiJ_G0019419) #15	Extl3 (MGP_CAROLIEiJ_G0019420) #16	Fzd3 (MGP_CAROLIEiJ_G0019421) #17	Fbxo16 (MGP_CAROLIEiJ_G0019422) #18	Zfp395 (MGP_CAROLIEiJ_G0019423) #19	Pnoc (MGP_CAROLIEiJ_G0019424) #20	Elp3 (MGP_CAROLIEiJ_G0019425) #21	Nuggc (MGP_CAROLIEiJ_G0019426) #22	Scara5 (MGP_CAROLIEiJ_G0019427) #23	Pbk (MGP_CAROLIEiJ_G0019428) #24	Esco2 (MGP_CAROLIEiJ_G0019429) #25	Ccdc25 (MGP_CAROLIEiJ_G0019430) #26	Scara3 (MGP_CAROLIEiJ_G0019431) #27	Clu (MGP_CAROLIEiJ_G0019432) #28	Gulo (MGP_CAROLIEiJ_G0019433) #29	Adam2 (MGP_CAROLIEiJ_G0019434) #30	Ephx2 (MGP_CAROLIEiJ_G0019435) #31	Chrna2 (MGP_CAROLIEiJ_G0019436) #33	Ptk2b (MGP_CAROLIEiJ_G0019437) #34	Trim35 (MGP_CAROLIEiJ_G0019438) #35	Stmn4 (MGP_CAROLIEiJ_G0019439) #37	Adra1a (MGP_CAROLIEiJ_G0019440)	MGP_CAROLIEiJ_G0019441
Upper Galilee mountains blind mole rat	MODERN SPECIES	589	4930578I06Rik (ENSNGAG00000009966) #7	Prss55 (ENSNGAG00000011795) #9	ENSNGAG00000021775	Prss52 (ENSNGAG00000023654) #11	Msra (ENSNGAG00000017348) #12	ENSNGAG00000010801	Kif13b (ENSNGAG00000018729) #13	Hmbox1 (ENSNGAG00000022905) #14	Ints9 (ENSNGAG00000024198) #15	Extl3 (ENSNGAG00000020413) #16	Fzd3 (ENSNGAG00000018670) #17	Fbxo16 (ENSNGAG00000012031) #18	Zfp395 (ENSNGAG00000004006) #19	Pnoc (ENSNGAG00000013397) #20	Elp3 (ENSNGAG00000004373) #21	Nuggc (ENSNGAG00000022052) #22	Scara5 (ENSNGAG00000006829) #23	Pbk (ENSNGAG00000023879) #24	Esco2 (ENSNGAG00000013208) #25	Ccdc25 (ENSNGAG00000018920) #26	Scara3 (ENSNGAG00000023203) #27	Clu (ENSNGAG00000013029) #28	Gulo (ENSNGAG00000024191) #29	Adam2 (ENSNGAG00000005586) #30	Ephx2 (ENSNGAG00000022968) #31	Chrna2 (ENSNGAG00000023099) #33	Ptk2b (ENSNGAG00000023988) #34	Trim35 (ENSNGAG00000023890) #35	Stmn4 (ENSNGAG00000019172) #37
Lesser Egyptian jerboa	MODERN SPECIES	125										ENSJJAG00000010971	ENSJJAG00000003893	Syt4 (ENSJJAG00000022564)	Rit2 (ENSJJAG00000021302)	ENSJJAG00000018157	Pik3c3 (ENSJJAG00000000136)	Nuggc (ENSJJAG00000020439) #22	Scara5 (ENSJJAG00000015781) #23	ENSJJAG00000013978 #24	Esco2 (ENSJJAG00000016831) #25	ENSJJAG00000016351 #26	Scara3 (ENSJJAG00000015535) #27	Clu (ENSJJAG00000011133) #28	Gulo (ENSJJAG00000008997) #29	Adam2 (ENSJJAG00000021729) #30	Ephx2 (ENSJJAG00000021412) #31	Chrna2 (ENSJJAG00000018111) #33	Ptk2b (ENSJJAG00000013115) #34	Trim35 (ENSJJAG00000011832) #35	ENSJJAG00000011170	Stmn4 (ENSJJAG00000010283) #37	Adra1a (ENSJJAG00000008597)
Kangaroo rat	MODERN SPECIES	393	Pinx1 (ENSDORG00000004065)	4930578I06Rik (ENSDORG00000011613) #7	Prss55 (ENSDORG00000000666) #9	ENSDORG00000028826	ENSDORG00000030167 ##10	Msra (ENSDORG00000004084) #12	Kif13b (ENSDORG00000015972) #13	Hmbox1 (ENSDORG00000015971) #14	Ints9 (ENSDORG00000008604) #15	Extl3 (ENSDORG00000011937) #16	Fzd3 (ENSDORG00000026500) #17	Fbxo16 (ENSDORG00000009764) #18	Zfp395 (ENSDORG00000005052) #19	Pnoc (ENSDORG00000005053) #20	Elp3 (ENSDORG00000012451) #21	Nuggc (ENSDORG00000012444) #22	Scara5 (ENSDORG00000010511) #23	Esco2 (ENSDORG00000014897) #25	Ccdc25 (ENSDORG00000006595) #26	Scara3 (ENSDORG00000015368) #27	Clu (ENSDORG00000010249) #28	Gulo (ENSDORG00000024023) #29	Adam2 (ENSDORG00000002055) #30	Ephx2 (ENSDORG00000010204) #31	Chrna2 (ENSDORG00000010203) #33	Ptk2b (ENSDORG00000010200) #34	Trim35 (ENSDORG00000010264) #35	Stmn4 (ENSDORG00000010266) #37
Rodentia_A	ANCESTRAL SPECIES	21	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00950000185466	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105
Sciuridae	ANCESTRAL SPECIES	29	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00950000185466	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105
Marmotini	ANCESTRAL SPECIES	30	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839.c #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Marmotini_b	ANCESTRAL SPECIES	138	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839.c #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37
Squirrel	MODERN SPECIES	275	ENSSTOG00000021185 #8	PRSS55 (ENSSTOG00000011728) #9	ENSSTOG00000034166	ENSSTOG00000025120 #11	MSRA (ENSSTOG00000024714) #12	ENSSTOG00000033697	KIF13B (ENSSTOG00000004778) #13	HMBOX1 (ENSSTOG00000004762) #14	INTS9 (ENSSTOG00000011703) #15	EXTL3 (ENSSTOG00000019391) #16	FZD3 (ENSSTOG00000011064) #17	FBXO16 (ENSSTOG00000029192) #18	ZNF395 (ENSSTOG00000001396) #19	PNOC (ENSSTOG00000001392) #20	ELP3 (ENSSTOG00000000508) #21	NUGGC (ENSSTOG00000000498) #22	SCARA5 (ENSSTOG00000000496) #23	PBK (ENSSTOG00000028798) #24	ESCO2 (ENSSTOG00000000493) #25	CCDC25 (ENSSTOG00000000490) #26	SCARA3 (ENSSTOG00000023922) #27	CLU (ENSSTOG00000026703) #28	ENSSTOG00000026329 #29	ADAM2 (ENSSTOG00000011994) #30	ENSSTOG00000004408	EPHX2 (ENSSTOG00000010872) #31	CHRNA2 (ENSSTOG00000016060) #33	PTK2B (ENSSTOG00000009205) #34	TRIM35 (ENSSTOG00000020486) #35	STMN4 (ENSSTOG00000007200) #37
Arctic ground squirrel	MODERN SPECIES	203	ENSUPAG00010003314 #8	ENSUPAG00010003330 #9	PRSS51 (ENSUPAG00010003337) #10	ENSUPAG00010003355 #11	MSRA (ENSUPAG00010003365) #12	KIF13B (ENSUPAG00010003395) #13	HMBOX1 (ENSUPAG00010003528) #14	INTS9 (ENSUPAG00010003602) #15	EXTL3 (ENSUPAG00010003630) #16	FZD3 (ENSUPAG00010003648) #17	FBXO16 (ENSUPAG00010003660) #18	ENSUPAG00010003704	ZNF395 (ENSUPAG00010003708) #19	PNOC (ENSUPAG00010003731) #20	ELP3 (ENSUPAG00010003737) #21	NUGGC (ENSUPAG00010003759) #22	SCARA5 (ENSUPAG00010003795) #23	PBK (ENSUPAG00010003803) #24	ESCO2 (ENSUPAG00010003820) #25	CCDC25 (ENSUPAG00010003839) #26	SCARA3 (ENSUPAG00010003867) #27	CLU (ENSUPAG00010003882) #28	ENSUPAG00010003895 #29	ADAM2 (ENSUPAG00010003911) #30	EPHX2 (ENSUPAG00010003940) #31	ENSUPAG00010004106 #34	TRIM35 (ENSUPAG00010004126) #35	STMN4 (ENSUPAG00010004143) #37
Alpin marmot	MODERN SPECIES	61	ENSMMMG00000012429 #9	PRSS51 (ENSMMMG00000012438) #10	ENSMMMG00000012451 #11	MSRA (ENSMMMG00000012458) #12	ENSMMMG00000012470	KIF13B (ENSMMMG00000012474) #13	HMBOX1 (ENSMMMG00000012513) #14	INTS9 (ENSMMMG00000012520) #15	EXTL3 (ENSMMMG00000012868) #16	FZD3 (ENSMMMG00000012893) #17	ENSMMMG00000012897	FBXO16 (ENSMMMG00000012903) #18	ZNF395 (ENSMMMG00000012939) #19	PNOC (ENSMMMG00000012949) #20	ELP3 (ENSMMMG00000012964) #21	NUGGC (ENSMMMG00000012992) #22	SCARA5 (ENSMMMG00000013022) #23	ENSMMMG00000013030 #24	ESCO2 (ENSMMMG00000013045) #25	CCDC25 (ENSMMMG00000013061) #26	SCARA3 (ENSMMMG00000013090) #27	CLU (ENSMMMG00000013091) #28	ENSMMMG00000013102 #29	ADAM2 (ENSMMMG00000013126) #30	EPHX2 (ENSMMMG00000013154) #31	ENSMMMG00000013222 #33	PTK2B (ENSMMMG00000013250) #34	ENSMMMG00000013471 #35	STMN4 (ENSMMMG00000013482) #37	ADRA1A (ENSMMMG00000013560)	DPYSL2 (ENSMMMG00000013573)
Eurasian red squirrel	MODERN SPECIES	14	C8orf74 (ENSSVLG00005006760) #7	ENSSVLG00005006804 #8	PRSS55 (ENSSVLG00005000180) #9	PRSS51 (ENSSVLG00005000208) #10	ENSSVLG00005000266 ##10	MSRA (ENSSVLG00005000328) #12	KIF13B (ENSSVLG00005000912) #13	HMBOX1 (ENSSVLG00005001517) #14	INTS9 (ENSSVLG00005001565) #15	EXTL3 (ENSSVLG00005001634) #16	FZD3 (ENSSVLG00005001660) #17	FBXO16 (ENSSVLG00005001709) #18	ZNF395 (ENSSVLG00005001763) #19	PNOC (ENSSVLG00005001784) #20	ELP3 (ENSSVLG00005001840) #21	NUGGC (ENSSVLG00005001962) #22	SCARA5 (ENSSVLG00005002024) #23	PBK (ENSSVLG00005002075) #24	ENSSVLG00005002097	ESCO2 (ENSSVLG00005002121) #25	CCDC25 (ENSSVLG00005002167) #26	SCARA3 (ENSSVLG00005002219) #27	CLU (ENSSVLG00005002257) #28	ENSSVLG00005002289 #29	ADAM2 (ENSSVLG00005002341) #30	EPHX2 (ENSSVLG00005002467) #31	CHRNA2 (ENSSVLG00005002577) #33	PTK2B (ENSSVLG00005002627) #34	ENSSVLG00005002776	TRIM35 (ENSSVLG00005002788) #35	STMN4 (ENSSVLG00005002831) #37
Hystricomorpha	ANCESTRAL SPECIES	21	ENSGT00940000161092	ENSGT00940000154323.b #7	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.p #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	20	ENSGT00940000161092	ENSGT00940000154323.b #7	ENSGT00940000156020.b.a #9	ENSGT01030000234551.k.d.a.c	ENSGT00940000156020.a ##10	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.p #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Guinea pig	MODERN SPECIES	1	ENSCPOG00000006054	NEIL2 (ENSCPOG00000006058)	FDFT1 (ENSCPOG00000007700)	CTSB (ENSCPOG00000009125)	DEFB136 (ENSCPOG00000000541)	ENSCPOG00000005487	ENSCPOG00000020935	ENSCPOG00000026053	ENSCPOG00000039861	ENSCPOG00000030429	ENSCPOG00000000422	ENSCPOG00000014840	ZNF395 (ENSCPOG00000003689) #19	PNOC (ENSCPOG00000006646) #20	ELP3 (ENSCPOG00000003742) #21	NUGGC (ENSCPOG00000003741) #22	SCARA5 (ENSCPOG00000023428) #23	PBK (ENSCPOG00000010826) #24	ESCO2 (ENSCPOG00000024189) #25	CCDC25 (ENSCPOG00000038303) #26	SCARA3 (ENSCPOG00000034540) #27	CLU (ENSCPOG00000019546) #28	ADAM2 (ENSCPOG00000022133) #30	EPHX2 (ENSCPOG00000037609) #31	CHRNA2 (ENSCPOG00000038123) #33	PTK2B (ENSCPOG00000004602) #34	TRIM35 (ENSCPOG00000032287) #35	STMN4 (ENSCPOG00000005528) #37	ADRA1A (ENSCPOG00000038399)	DPYSL2 (ENSCPOG00000025679)	BNIP3L (ENSCPOG00000034680)
Hystricomorpha_b	ANCESTRAL SPECIES	30	ENSGT00940000161092	ENSGT00940000154323.b #7	ENSGT00940000156020.b.a #9	ENSGT01030000234551.k.d.a.c	ENSGT00940000156020.a ##10	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.p #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000161961 #30	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Degu	MODERN SPECIES	77	ENSODEG00000008517 ##10	MSRA (ENSODEG00000008050) #12	ENSODEG00000019405	KIF13B (ENSODEG00000009358) #13	HMBOX1 (ENSODEG00000009907) #14	ENSODEG00000019625	INTS9 (ENSODEG00000007631) #15	EXTL3 (ENSODEG00000008663) #16	ENSODEG00000008198	ENSODEG00000019437	FZD3 (ENSODEG00000008946) #17	FBXO16 (ENSODEG00000008057) #18	ZNF395 (ENSODEG00000007787) #19	PNOC (ENSODEG00000007324) #20	ELP3 (ENSODEG00000008983) #21	NUGGC (ENSODEG00000007232) #22	SCARA5 (ENSODEG00000007378) #23	PBK (ENSODEG00000009607) #24	ESCO2 (ENSODEG00000010631) #25	CCDC25 (ENSODEG00000007236) #26	SCARA3 (ENSODEG00000007451) #27	CLU (ENSODEG00000007758) #28	ENSODEG00000012794 #29	ADAM2 (ENSODEG00000008302) #30	EPHX2 (ENSODEG00000007405) #31	CHRNA2 (ENSODEG00000008004) #33	PTK2B (ENSODEG00000009950) #34	TRIM35 (ENSODEG00000008434) #35	STMN4 (ENSODEG00000006658) #37	ENSODEG00000010902	ADRA1A (ENSODEG00000007554)
Long-tailed chinchilla	MODERN SPECIES	110	SOX7 (ENSCLAG00000014320)	C8orf74 (ENSCLAG00000016673) #7	PRSS55 (ENSCLAG00000015325) #9	ENSCLAG00000016541	ENSCLAG00000015445 ##10	MSRA (ENSCLAG00000016097) #12	KIF13B (ENSCLAG00000014088) #13	ENSCLAG00000014654 #14	INTS9 (ENSCLAG00000015789) #15	EXTL3 (ENSCLAG00000016016) #16	FZD3 (ENSCLAG00000015263) #17	FBXO16 (ENSCLAG00000017107) #18	ZNF395 (ENSCLAG00000015098) #19	PNOC (ENSCLAG00000013995) #20	ELP3 (ENSCLAG00000016550) #21	NUGGC (ENSCLAG00000014640) #22	SCARA5 (ENSCLAG00000015896) #23	PBK (ENSCLAG00000014953) #24	ESCO2 (ENSCLAG00000017015) #25	CCDC25 (ENSCLAG00000013927) #26	SCARA3 (ENSCLAG00000016246) #27	CLU (ENSCLAG00000014457) #28	ENSCLAG00000014336 #29	ADAM2 (ENSCLAG00000014916) #30	EPHX2 (ENSCLAG00000014569) #31	CHRNA2 (ENSCLAG00000016813) #33	PTK2B (ENSCLAG00000015285) #34	TRIM35 (ENSCLAG00000014327) #35	STMN4 (ENSCLAG00000014584) #37	ADRA1A (ENSCLAG00000014689)	DPYSL2 (ENSCLAG00000015960)
Naked mole-rat female	MODERN SPECIES	25	SOX7 (ENSHGLG00000007410)	ENSHGLG00000006715 #7	PRSS55 (ENSHGLG00000005245) #9	PRSS51 (ENSHGLG00000005119) #10	ENSHGLG00000008586 #11	ENSHGLG00000006978 #12	ENSHGLG00000004739 #13	HMBOX1 (ENSHGLG00000008466) #14	INTS9 (ENSHGLG00000005379) #15	EXTL3 (ENSHGLG00000004822) #16	FZD3 (ENSHGLG00000015551) #17	FBXO16 (ENSHGLG00000014834) #18	ZNF395 (ENSHGLG00000017520) #19	PNOC (ENSHGLG00000043429) #20	ELP3 (ENSHGLG00000004990) #21	NUGGC (ENSHGLG00000015007) #22	SCARA5 (ENSHGLG00000013223) #23	PBK (ENSHGLG00000018426) #24	ESCO2 (ENSHGLG00000008587) #25	CCDC25 (ENSHGLG00000007627) #26	SCARA3 (ENSHGLG00000006976) #27	Clu (ENSHGLG00000033946) #28	ENSHGLG00000004501 #29	ENSHGLG00000045036	ADAM2 (ENSHGLG00000007670) #30	EPHX2 (ENSHGLG00000005581) #31	CHRNA2 (ENSHGLG00000004833) #33	PTK2B (ENSHGLG00000015272) #34	TRIM35 (ENSHGLG00000034100) #35	STMN4 (ENSHGLG00000016773) #37	ENSHGLG00000045878
Lagomorpha	ANCESTRAL SPECIES	60	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000156020.a ##10	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a
Rabbit	MODERN SPECIES	11	C8orf74 (ENSOCUG00000015568) #7	ENSOCUG00000010566 #8	PRSS55 (ENSOCUG00000012405) #9	ENSOCUG00000035787 #10	ENSOCUG00000023048 ##10	MSRA (ENSOCUG00000003370) #12	KIF13B (ENSOCUG00000005942) #13	HMBOX1 (ENSOCUG00000017211) #14	INTS9 (ENSOCUG00000015356) #15	EXTL3 (ENSOCUG00000015351) #16	FZD3 (ENSOCUG00000025264) #17	FBXO16 (ENSOCUG00000022817) #18	ZNF395 (ENSOCUG00000014174) #19	PNOC (ENSOCUG00000014172) #20	ELP3 (ENSOCUG00000000034) #21	NUGGC (ENSOCUG00000000032) #22	SCARA5 (ENSOCUG00000026532) #23	PBK (ENSOCUG00000000031) #24	ESCO2 (ENSOCUG00000009932) #25	CCDC25 (ENSOCUG00000009924) #26	SCARA3 (ENSOCUG00000009918) #27	CLU (ENSOCUG00000005985) #28	ENSOCUG00000024474 #29	ADAM2 (ENSOCUG00000006251) #30	CHRNA2 (ENSOCUG00000007679) #33	PTK2B (ENSOCUG00000007668) #34	TRIM35 (ENSOCUG00000007658) #35	STMN4 (ENSOCUG00000007652) #37	ENSOCUG00000038802	ADRA1A (ENSOCUG00000000775)	ENSOCUG00000033215
Primates	ANCESTRAL SPECIES	25	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00940000164622	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b
Haplorrhini	ANCESTRAL SPECIES	27	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000164622	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00950000182859.A.a.a.b
Simiiformes	ANCESTRAL SPECIES	25	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000164622	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00910000147307	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.a #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b
Catarrhini	ANCESTRAL SPECIES	15	ENSGT00390000006503.b	ENSGT00390000013419	ENSGT00940000153487.b.b.i.b	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00910000147307	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00950000183210.d.a.c.b.b.a.b.b ##32	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.a.b #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00960000186788
Hominoidea	ANCESTRAL SPECIES	14	ENSGT00390000006503.b	ENSGT00390000013419	ENSGT00940000153487.b.b.i.b	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00910000147307	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00950000183210.d.a.c.b.b.a.b.b ##32	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.b.a #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00960000186788
Hominidae	ANCESTRAL SPECIES	15	ENSGT00390000006503.b	ENSGT00390000013419	ENSGT00940000153487.b.b.i.b	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00910000147307	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00950000183210.d.a.c.b.b.a.b.b ##32	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.b.a #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00960000186788
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00390000013419	ENSGT00940000153487.b.b.i.b	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00910000147585	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00910000147307	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00950000183210.d.a.c.b.b.a.b.b ##32	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.b.a #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00960000186788
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00390000013419	ENSGT00940000153487.b.b.i.b	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00910000147585	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00910000147307	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00950000183210.d.a.c.b.b.a.b.b ##32	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.b.a #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00960000186788
Pan	ANCESTRAL SPECIES	30	ENSGT00390000013419	ENSGT00940000153487.b.b.i.b	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00910000147585	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00910000147307	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00950000183210.d.a.c.b.b.a.b.b ##32	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.b.a #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00960000186788
Bonobo	MODERN SPECIES	21	SARAF (ENSPPAG00000032572)	ENSPPAG00000043687	DUSP4 (ENSPPAG00000036541)	KIF13B (ENSPPAG00000042259) #13	ENSPPAG00000036843	HMBOX1 (ENSPPAG00000026235) #14	INTS9 (ENSPPAG00000041473) #15	ENSPPAG00000027198	EXTL3 (ENSPPAG00000033582) #16	FZD3 (ENSPPAG00000032462) #17	FBXO16 (ENSPPAG00000030694) #18	ZNF395 (ENSPPAG00000029300) #19	PNOC (ENSPPAG00000031795) #20	ENSPPAG00000042684 ##32	ELP3 (ENSPPAG00000003473) #21	NUGGC (ENSPPAG00000033912) #22	SCARA5 (ENSPPAG00000032372) #23	PBK (ENSPPAG00000036956) #24	ESCO2 (ENSPPAG00000037825) #25	CCDC25 (ENSPPAG00000035057) #26	SCARA3 (ENSPPAG00000031092) #27	CLU (ENSPPAG00000030389) #28	EPHX2 (ENSPPAG00000034443) #31	CHRNA2 (ENSPPAG00000042024) #33	PTK2B (ENSPPAG00000037974) #34	TRIM35 (ENSPPAG00000038841) #35	ENSPPAG00000043385 #37	ADRA1A (ENSPPAG00000043804)	DPYSL2 (ENSPPAG00000035831)	PNMA2 (ENSPPAG00000033170)	ENSPPAG00000040176
Chimpanzee	MODERN SPECIES	21	LEPROTL1 (ENSPTRG00000039951)	SARAF (ENSPTRG00000020131)	ENSPTRG00000043672	DUSP4 (ENSPTRG00000020129)	ENSPTRG00000051054	KIF13B (ENSPTRG00000023437) #13	HMBOX1 (ENSPTRG00000020127) #14	INTS9 (ENSPTRG00000020125) #15	EXTL3 (ENSPTRG00000020124) #16	FZD3 (ENSPTRG00000020122) #17	FBXO16 (ENSPTRG00000034416) #18	ZNF395 (ENSPTRG00000020119) #19	PNOC (ENSPTRG00000020116) #20	ENSPTRG00000043531 ##32	ELP3 (ENSPTRG00000020115) #21	NUGGC (ENSPTRG00000020114) #22	SCARA5 (ENSPTRG00000020113) #23	PBK (ENSPTRG00000020112) #24	ESCO2 (ENSPTRG00000020110) #25	CCDC25 (ENSPTRG00000020109) #26	SCARA3 (ENSPTRG00000020108) #27	CLU (ENSPTRG00000020107) #28	EPHX2 (ENSPTRG00000020106) #31	CHRNA2 (ENSPTRG00000020105) #33	PTK2B (ENSPTRG00000020104) #34	TRIM35 (ENSPTRG00000020103) #35	STMN4 (ENSPTRG00000020102) #37	ENSPTRG00000045362	ADRA1A (ENSPTRG00000020100)	DPYSL2 (ENSPTRG00000020099)	PNMA2 (ENSPTRG00000051035)
Human	MODERN SPECIES	20	RBPMS (ENSG00000157110)	DCTN6 (ENSG00000104671)	MBOAT4 (ENSG00000177669)	LEPROTL1 (ENSG00000104660)	SARAF (ENSG00000133872)	DUSP4 (ENSG00000120875)	KIF13B (ENSG00000197892) #13	HMBOX1 (ENSG00000147421) #14	INTS9 (ENSG00000104299) #15	EXTL3 (ENSG00000012232) #16	FZD3 (ENSG00000104290) #17	FBXO16 (ENSG00000214050) #18	ZNF395 (ENSG00000186918) #19	PNOC (ENSG00000168081) #20	ELP3 (ENSG00000134014) #21	NUGGC (ENSG00000189233) #22	SCARA5 (ENSG00000168079) #23	PBK (ENSG00000168078) #24	ESCO2 (ENSG00000171320) #25	CCDC25 (ENSG00000147419) #26	SCARA3 (ENSG00000168077) #27	CLU (ENSG00000120885) #28	EPHX2 (ENSG00000120915) #31	CHRNA2 (ENSG00000120903) #33	PTK2B (ENSG00000120899) #34	TRIM35 (ENSG00000104228) #35	STMN4 (ENSG00000015592) #37	ADRA1A (ENSG00000120907)	DPYSL2 (ENSG00000092964)	PNMA2 (ENSG00000240694)	BNIP3L (ENSG00000104765)
Gorilla	MODERN SPECIES	21	ENSGGOG00000039626	ENSGGOG00000036670	ENSGGOG00000038643	ENSGGOG00000022968	DUSP4 (ENSGGOG00000005916)	ENSGGOG00000037881	KIF13B (ENSGGOG00000000863) #13	HMBOX1 (ENSGGOG00000000860) #14	INTS9 (ENSGGOG00000017009) #15	EXTL3 (ENSGGOG00000008655) #16	FZD3 (ENSGGOG00000024822) #17	FBXO16 (ENSGGOG00000016343) #18	ZNF395 (ENSGGOG00000015725) #19	PNOC (ENSGGOG00000015723) #20	ELP3 (ENSGGOG00000004808) #21	NUGGC (ENSGGOG00000011097) #22	SCARA5 (ENSGGOG00000001855) #23	PBK (ENSGGOG00000006648) #24	ESCO2 (ENSGGOG00000009689) #25	CCDC25 (ENSGGOG00000009685) #26	ENSGGOG00000004099 #27	CLU (ENSGGOG00000016926) #28	EPHX2 (ENSGGOG00000016993) #31	CHRNA2 (ENSGGOG00000015596) #33	PTK2B (ENSGGOG00000015589) #34	ENSGGOG00000010652 #35	ENSGGOG00000003341 #37	ADRA1A (ENSGGOG00000000511)	DPYSL2 (ENSGGOG00000000194)	PNMA2 (ENSGGOG00000043329)	ENSGGOG00000038243
Orangutan	MODERN SPECIES	21	MBOAT4 (ENSPPYG00000018485)	ENSPPYG00000032388	LEPROTL1 (ENSPPYG00000018484)	SARAF (ENSPPYG00000018483)	ENSPPYG00000038802	DUSP4 (ENSPPYG00000018482)	KIF13B (ENSPPYG00000018481) #13	HMBOX1 (ENSPPYG00000018480) #14	INTS9 (ENSPPYG00000018479) #15	EXTL3 (ENSPPYG00000018478) #16	FZD3 (ENSPPYG00000018477) #17	FBXO16 (ENSPPYG00000029855) #18	ZNF395 (ENSPPYG00000018476) #19	PNOC (ENSPPYG00000018475) #20	ELP3 (ENSPPYG00000018473) #21	NUGGC (ENSPPYG00000018472) #22	SCARA5 (ENSPPYG00000018471) #23	PBK (ENSPPYG00000018470) #24	ESCO2 (ENSPPYG00000018469) #25	CCDC25 (ENSPPYG00000018468)	SCARA3 (ENSPPYG00000018467) #27	CLU (ENSPPYG00000018466) #28	EPHX2 (ENSPPYG00000018465) #31	CHRNA2 (ENSPPYG00000018464) #33	PTK2B (ENSPPYG00000018462) #34	TRIM35 (ENSPPYG00000018461) #35	STMN4 (ENSPPYG00000018460) #37	ADRA1A (ENSPPYG00000018459)	DPYSL2 (ENSPPYG00000018458)	PNMA2 (ENSPPYG00000018457)	ENSPPYG00000033464
Gibbon	MODERN SPECIES	23	MBOAT4 (ENSNLEG00000011902)	ENSNLEG00000019089	ENSNLEG00000011892	SARAF (ENSNLEG00000011880)	DUSP4 (ENSNLEG00000016740)	KIF13B (ENSNLEG00000016716) #13	HMBOX1 (ENSNLEG00000016701) #14	INTS9 (ENSNLEG00000016658) #15	ENSNLEG00000035669	EXTL3 (ENSNLEG00000016652) #16	FZD3 (ENSNLEG00000016642) #17	ENSNLEG00000016633 #18	ZNF395 (ENSNLEG00000016613) #19	ENSNLEG00000016608 #20	ELP3 (ENSNLEG00000016577) #21	NUGGC (ENSNLEG00000016569) #22	SCARA5 (ENSNLEG00000016553) #23	PBK (ENSNLEG00000016542) #24	ESCO2 (ENSNLEG00000016527) #25	ENSNLEG00000016507 #26	SCARA3 (ENSNLEG00000016505) #27	CLU (ENSNLEG00000016366) #28	EPHX2 (ENSNLEG00000016316) #31	CHRNA2 (ENSNLEG00000016309) #33	PTK2B (ENSNLEG00000016291) #34	TRIM35 (ENSNLEG00000016281) #35	STMN4 (ENSNLEG00000031885) #37	ADRA1A (ENSNLEG00000016272)	DPYSL2 (ENSNLEG00000016244)	PNMA2 (ENSNLEG00000019079)	BNIP3L (ENSNLEG00000016221)
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT01030000234564.a.a.b.b	ENSGT00390000006503.b	ENSGT00390000013419	ENSGT00940000153487.b.b.i.b	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00950000183210.d.a.c.b.b.a.b.b ##32	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.a.b #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00960000186788
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT01030000234564.a.a.b.b	ENSGT00390000006503.b	ENSGT00390000013419	ENSGT00940000153487.b.b.i.b	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00950000183210.d.a.c.b.b.a.b.b ##32	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.a.b #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT01030000234564.a.a.b.b	ENSGT00390000006503.b	ENSGT00390000013419	ENSGT00940000153487.b.b.i.b	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00950000183210.d.a.c.b.b.a.b.b.c ##32	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.a.b #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT01030000234564.a.a.b.b	ENSGT00390000006503.b	ENSGT00390000013419	ENSGT00940000153487.b.b.i.b	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00950000183210.d.a.c.b.b.a.b.b.c ##32	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.a.b #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b
Olive baboon	MODERN SPECIES	18	MBOAT4 (ENSPANG00000020593)	LEPROTL1 (ENSPANG00000018510)	SARAF (ENSPANG00000005235)	ENSPANG00000044385	ENSPANG00000037472	DUSP4 (ENSPANG00000016692)	KIF13B (ENSPANG00000020594) #13	HMBOX1 (ENSPANG00000014537) #14	INTS9 (ENSPANG00000016305) #15	EXTL3 (ENSPANG00000016340) #16	FZD3 (ENSPANG00000010199) #17	FBXO16 (ENSPANG00000019570) #18	ZNF395 (ENSPANG00000017244) #19	PNOC (ENSPANG00000022004) #20	ELP3 (ENSPANG00000019350) #21	NUGGC (ENSPANG00000010200) #22	SCARA5 (ENSPANG00000021266) #23	PBK (ENSPANG00000024523) #24	ESCO2 (ENSPANG00000008112) #25	ENSPANG00000012552 #26	SCARA3 (ENSPANG00000016907) #27	CLU (ENSPANG00000024524) #28	EPHX2 (ENSPANG00000001096) #31	CHRNA2 (ENSPANG00000015733) #33	PTK2B (ENSPANG00000019189) #34	TRIM35 (ENSPANG00000017759) #35	STMN4 (ENSPANG00000007322) #37	ADRA1A (ENSPANG00000024527)	DPYSL2 (ENSPANG00000024528)	PNMA2 (ENSPANG00000007854)	ENSPANG00000048024
Cercopithecinae_d	ANCESTRAL SPECIES	50	ENSGT01030000234564.a.a.b.b	ENSGT00390000006503.b	ENSGT00390000013419	ENSGT00940000153487.b.b.i.b	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00950000183210.d.a.c.b.b.a.b.b.c ##32	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.a.b #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b
Sooty mangabey	MODERN SPECIES	555	MBOAT4 (ENSCATG00000029389)	LEPROTL1 (ENSCATG00000037168)	SARAF (ENSCATG00000044043)	ENSCATG00000041532	DUSP4 (ENSCATG00000031537)	KIF13B (ENSCATG00000008274) #13	HMBOX1 (ENSCATG00000037589) #14	INTS9 (ENSCATG00000042463) #15	EXTL3 (ENSCATG00000029453) #16	FZD3 (ENSCATG00000044589) #17	FBXO16 (ENSCATG00000040856) #18	ZNF395 (ENSCATG00000032647) #19	PNOC (ENSCATG00000034393) #20	ENSCATG00000035437 ##32	ELP3 (ENSCATG00000034665) #21	NUGGC (ENSCATG00000011556) #22	SCARA5 (ENSCATG00000032773) #23	PBK (ENSCATG00000023001) #24	ESCO2 (ENSCATG00000032436) #25	ENSCATG00000033671 #26	SCARA3 (ENSCATG00000037167) #27	CLU (ENSCATG00000009271) #28	EPHX2 (ENSCATG00000029846) #31	CHRNA2 (ENSCATG00000031746) #33	PTK2B (ENSCATG00000032885) #34	TRIM35 (ENSCATG00000032262) #35	STMN4 (ENSCATG00000022939) #37	ADRA1A (ENSCATG00000045125)	DPYSL2 (ENSCATG00000034654)	PNMA2 (ENSCATG00000017448)	BNIP3L (ENSCATG00000036601)
Drill	MODERN SPECIES	879							ENSMLEG00000043883 #14	INTS9 (ENSMLEG00000027845) #15	EXTL3 (ENSMLEG00000040065) #16	FZD3 (ENSMLEG00000040352) #17	FBXO16 (ENSMLEG00000007596) #18	ZNF395 (ENSMLEG00000005455) #19	PNOC (ENSMLEG00000031812) #20	ENSMLEG00000015003 ##32	ELP3 (ENSMLEG00000040984) #21	NUGGC (ENSMLEG00000042548) #22	SCARA5 (ENSMLEG00000041455) #23	PBK (ENSMLEG00000031460) #24	ESCO2 (ENSMLEG00000033287) #25	ENSMLEG00000029491 #26	SCARA3 (ENSMLEG00000035030) #27	CLU (ENSMLEG00000035141) #28	EPHX2 (ENSMLEG00000029411) #31	CHRNA2 (ENSMLEG00000029000) #33	PTK2B (ENSMLEG00000030832) #34	TRIM35 (ENSMLEG00000030731) #35	STMN4 (ENSMLEG00000037742) #37	ADRA1A (ENSMLEG00000043053)	DPYSL2 (ENSMLEG00000042022)	PNMA2 (ENSMLEG00000010554)	BNIP3L (ENSMLEG00000041439)
Macaca	ANCESTRAL SPECIES	14	ENSGT01030000234564.a.a.b.b	ENSGT00390000006503.b	ENSGT00390000013419	ENSGT00940000153487.b.b.i.b	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00950000183210.d.a.c.b.b.a.b.b.c ##32	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.a.b #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b
Pig-tailed macaque	MODERN SPECIES	579	MBOAT4 (ENSMNEG00000029602)	LEPROTL1 (ENSMNEG00000045245)	SARAF (ENSMNEG00000010730)	ENSMNEG00000037297	DUSP4 (ENSMNEG00000039817)	KIF13B (ENSMNEG00000002442) #13	HMBOX1 (ENSMNEG00000036228) #14	INTS9 (ENSMNEG00000035204) #15	EXTL3 (ENSMNEG00000038935) #16	FZD3 (ENSMNEG00000040320) #17	FBXO16 (ENSMNEG00000045209) #18	ZNF395 (ENSMNEG00000011767) #19	PNOC (ENSMNEG00000032474) #20	ENSMNEG00000021099 ##32	ELP3 (ENSMNEG00000024316) #21	NUGGC (ENSMNEG00000045452) #22	SCARA5 (ENSMNEG00000043810) #23	PBK (ENSMNEG00000043731) #24	ENSMNEG00000007575	ESCO2 (ENSMNEG00000038253) #25	ENSMNEG00000036331 #26	SCARA3 (ENSMNEG00000037952) #27	CLU (ENSMNEG00000043022) #28	EPHX2 (ENSMNEG00000031898) #31	CHRNA2 (ENSMNEG00000036009) #33	PTK2B (ENSMNEG00000032809) #34	TRIM35 (ENSMNEG00000033062) #35	STMN4 (ENSMNEG00000042099) #37	ADRA1A (ENSMNEG00000032467)	DPYSL2 (ENSMNEG00000031797)	ENSMNEG00000040560
Macaca_a	ANCESTRAL SPECIES	16	ENSGT00940000165777	ENSGT00390000017890	ENSGT01030000234564.a.a.b.b	ENSGT00390000006503.b	ENSGT00390000013419	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.a.b #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00390000013415.a.b
Crab-eating macaque	MODERN SPECIES	18	MBOAT4 (ENSMFAG00000039870)	ENSMFAG00000032781	SARAF (ENSMFAG00000046215)	DUSP4 (ENSMFAG00000003869)	KIF13B (ENSMFAG00000038520) #13	HMBOX1 (ENSMFAG00000035548) #14	ENSMFAG00000060486	INTS9 (ENSMFAG00000043511) #15	EXTL3 (ENSMFAG00000045572) #16	FZD3 (ENSMFAG00000044555) #17	FBXO16 (ENSMFAG00000043613) #18	ENSMFAG00000049652	ZNF395 (ENSMFAG00000036920) #19	PNOC (ENSMFAG00000044801) #20	ELP3 (ENSMFAG00000000785) #21	NUGGC (ENSMFAG00000043857) #22	SCARA5 (ENSMFAG00000019218) #23	PBK (ENSMFAG00000001680) #24	ESCO2 (ENSMFAG00000044655) #25	ENSMFAG00000035835 #26	SCARA3 (ENSMFAG00000026741) #27	CLU (ENSMFAG00000041649) #28	EPHX2 (ENSMFAG00000036427) #31	CHRNA2 (ENSMFAG00000003637) #33	PTK2B (ENSMFAG00000003719) #34	TRIM35 (ENSMFAG00000035683) #35	ENSMFAG00000054931	STMN4 (ENSMFAG00000032113) #37	ADRA1A (ENSMFAG00000030813)	DPYSL2 (ENSMFAG00000005287)	PNMA2 (ENSMFAG00000000029)
Rhesus	MODERN SPECIES	18	DCTN6 (ENSMMUG00000013735)	MBOAT4 (ENSMMUG00000052895)	LEPROTL1 (ENSMMUG00000014144)	SARAF (ENSMMUG00000014143)	DUSP4 (ENSMMUG00000049727)	KIF13B (ENSMMUG00000039515) #13	HMBOX1 (ENSMMUG00000014981) #14	INTS9 (ENSMMUG00000019723) #15	EXTL3 (ENSMMUG00000017700) #16	FZD3 (ENSMMUG00000007486) #17	FBXO16 (ENSMMUG00000007480) #18	ZNF395 (ENSMMUG00000060762) #19	PNOC (ENSMMUG00000007479) #20	ENSMMUG00000064490	ELP3 (ENSMMUG00000005067) #21	NUGGC (ENSMMUG00000001040) #22	SCARA5 (ENSMMUG00000022044) #23	PBK (ENSMMUG00000016019) #24	ESCO2 (ENSMMUG00000016018) #25	CCDC25 (ENSMMUG00000016016) #26	ENSMMUG00000056404	SCARA3 (ENSMMUG00000021517) #27	CLU (ENSMMUG00000021516) #28	EPHX2 (ENSMMUG00000021515) #31	CHRNA2 (ENSMMUG00000021514) #33	PTK2B (ENSMMUG00000019159) #34	TRIM35 (ENSMMUG00000010092) #35	STMN4 (ENSMMUG00000018670) #37	ADRA1A (ENSMMUG00000023112)	ENSMMUG00000055650	DPYSL2 (ENSMMUG00000012718)
Rhinopithecus	ANCESTRAL SPECIES	55	ENSGT00390000017890	ENSGT01030000234564.a.a.b.b	ENSGT00390000006503.b	ENSGT00390000013419	ENSGT00940000153487.b.b.i.b	ENSGT00940000159066	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839.a #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.a.b #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b	ENSGT00960000186788
Golden snub-nosed monkey	MODERN SPECIES	1551	MBOAT4 (ENSRROG00000034165)	LEPROTL1 (ENSRROG00000029326)	SARAF (ENSRROG00000027882)	ENSRROG00000037428	ENSRROG00000023257	DUSP4 (ENSRROG00000022122)	KIF13B (ENSRROG00000043696) #13	HMBOX1 (ENSRROG00000031895) #14	INTS9 (ENSRROG00000040531) #15	EXTL3 (ENSRROG00000037901) #16	FZD3 (ENSRROG00000042665) #17	FBXO16 (ENSRROG00000031695) #18	ZNF395 (ENSRROG00000039052) #19	PNOC (ENSRROG00000034843) #20	ELP3 (ENSRROG00000035502) #21	NUGGC (ENSRROG00000035584) #22	SCARA5 (ENSRROG00000038278) #23
Black snub-nosed monkey	MODERN SPECIES	98				YIPF5 (ENSRBIG00000014169)	KCTD16 (ENSRBIG00000034847)	ENSRBIG00000044873	KIF13B (ENSRBIG00000043742) #13	HMBOX1 (ENSRBIG00000034543) #14	INTS9 (ENSRBIG00000038084) #15	EXTL3 (ENSRBIG00000028228) #16	FZD3 (ENSRBIG00000040353) #17	FBXO16 (ENSRBIG00000037905) #18	ZNF395 (ENSRBIG00000012476) #19	PNOC (ENSRBIG00000034240) #20	ELP3 (ENSRBIG00000029829) #21	NUGGC (ENSRBIG00000043902) #22	SCARA5 (ENSRBIG00000035322) #23	ENSRBIG00000030020	ENSRBIG00000039243 #24	ESCO2 (ENSRBIG00000012033) #25	ENSRBIG00000043704 #26	SCARA3 (ENSRBIG00000043052) #27	CLU (ENSRBIG00000030449) #28	EPHX2 (ENSRBIG00000044411) #31	CHRNA2 (ENSRBIG00000030777) #33	PTK2B (ENSRBIG00000030703) #34	TRIM35 (ENSRBIG00000038938) #35	STMN4 (ENSRBIG00000039520) #37	ADRA1A (ENSRBIG00000043723)	DPYSL2 (ENSRBIG00000038509)	PNMA2 (ENSRBIG00000016543)
Platyrrhini	ANCESTRAL SPECIES	29	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00910000147307	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.a #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a
Cebidae	ANCESTRAL SPECIES	30	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00910000147307	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.a #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a
Cebidae_a	ANCESTRAL SPECIES	44	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00910000147307	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380.m.a #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.a
Capuchin	MODERN SPECIES	125	RP1L1 (ENSCCAG00000024515) #8	PRSS55 (ENSCCAG00000031198) #9	PRSS51 (ENSCCAG00000034610) #10	MSRA (ENSCCAG00000027909) #12	ENSCCAG00000021568	KIF13B (ENSCCAG00000032396) #13	HMBOX1 (ENSCCAG00000025637) #14	INTS9 (ENSCCAG00000005937) #15	ENSCCAG00000030684	EXTL3 (ENSCCAG00000029340) #16	FZD3 (ENSCCAG00000030357) #17	ENSCCAG00000035625	ZNF395 (ENSCCAG00000010590) #19	PNOC (ENSCCAG00000033157) #20	ELP3 (ENSCCAG00000026958) #21	NUGGC (ENSCCAG00000024929) #22	SCARA5 (ENSCCAG00000020556) #23	PBK (ENSCCAG00000026612) #24	ESCO2 (ENSCCAG00000020110) #25	CCDC25 (ENSCCAG00000037254) #26	SCARA3 (ENSCCAG00000036648) #27	CLU (ENSCCAG00000019707) #28	EPHX2 (ENSCCAG00000028330) #31	CHRNA2 (ENSCCAG00000025139) #33	PTK2B (ENSCCAG00000027006) #34	TRIM35 (ENSCCAG00000036836) #35	STMN4 (ENSCCAG00000024945) #37	ENSCCAG00000021336	ADRA1A (ENSCCAG00000017294)	DPYSL2 (ENSCCAG00000034157)	BNIP3L (ENSCCAG00000037644)
Bolivian squirrel monkey	MODERN SPECIES	132					MSRA (ENSSBOG00000026473) #12	KIF13B (ENSSBOG00000011883) #13	HMBOX1 (ENSSBOG00000022462) #14	INTS9 (ENSSBOG00000034897) #15	EXTL3 (ENSSBOG00000029919) #16	FZD3 (ENSSBOG00000030894) #17	ENSSBOG00000012318	FBXO16 (ENSSBOG00000031835) #18	ZNF395 (ENSSBOG00000030199) #19	PNOC (ENSSBOG00000021496) #20	ELP3 (ENSSBOG00000025739) #21	NUGGC (ENSSBOG00000028930) #22	SCARA5 (ENSSBOG00000028648) #23	ESCO2 (ENSSBOG00000023036) #25	ENSSBOG00000032304 #26	SCARA3 (ENSSBOG00000021459) #27	CLU (ENSSBOG00000030641) #28	EPHX2 (ENSSBOG00000034083) #31	CHRNA2 (ENSSBOG00000032890) #33	PTK2B (ENSSBOG00000020869) #34	TRIM35 (ENSSBOG00000023023) #35	STMN4 (ENSSBOG00000027671) #37	ADRA1A (ENSSBOG00000019482)	DPYSL2 (ENSSBOG00000022904)	BNIP3L (ENSSBOG00000001484)	PPP2R2A (ENSSBOG00000022095)	EBF2 (ENSSBOG00000029332)
Marmoset	MODERN SPECIES	4	ENSCJAG00000084199	ENSCJAG00000073616	KIF13B (ENSCJAG00000015694) #13	ENSCJAG00000014551	HMBOX1 (ENSCJAG00000015654) #14	INTS9 (ENSCJAG00000015614) #15	ENSCJAG00000083098	EXTL3 (ENSCJAG00000015598) #16	ENSCJAG00000079344	ENSCJAG00000085398	FZD3 (ENSCJAG00000015561) #17	FBXO16 (ENSCJAG00000015578) #18	ZNF395 (ENSCJAG00000015540) #19	PNOC (ENSCJAG00000015535) #20	ELP3 (ENSCJAG00000015478) #21	NUGGC (ENSCJAG00000015456) #22	SCARA5 (ENSCJAG00000015467) #23	PBK (ENSCJAG00000015448) #24	ESCO2 (ENSCJAG00000015416) #25	ENSCJAG00000052322 #26	SCARA3 (ENSCJAG00000019539) #27	CLU (ENSCJAG00000019662) #28	EPHX2 (ENSCJAG00000019677) #31	CHRNA2 (ENSCJAG00000019690) #33	PTK2B (ENSCJAG00000019574) #34	TRIM35 (ENSCJAG00000019863) #35	STMN4 (ENSCJAG00000019866) #37	ADRA1A (ENSCJAG00000080222)	ENSCJAG00000084865	DPYSL2 (ENSCJAG00000042451)	BNIP3L (ENSCJAG00000075722)
Mas night monkey	MODERN SPECIES	974		MSRA (ENSANAG00000017040) #12	KIF13B (ENSANAG00000030480) #13	HMBOX1 (ENSANAG00000023362) #14	INTS9 (ENSANAG00000031763) #15	ENSANAG00000031622	EXTL3 (ENSANAG00000034591) #16	ENSANAG00000018007	FZD3 (ENSANAG00000034098) #17	ENSANAG00000035511	FBXO16 (ENSANAG00000010190) #18	ZNF395 (ENSANAG00000035574) #19	PNOC (ENSANAG00000005124) #20	ELP3 (ENSANAG00000037178) #21	ENSANAG00000026004	NUGGC (ENSANAG00000022394) #22	SCARA5 (ENSANAG00000022183) #23	PBK (ENSANAG00000031844) #24	ESCO2 (ENSANAG00000021740) #25	ENSANAG00000027853 #26	SCARA3 (ENSANAG00000032323) #27	CLU (ENSANAG00000032018) #28	EPHX2 (ENSANAG00000006028) #31	CHRNA2 (ENSANAG00000023714) #33	PTK2B (ENSANAG00000034147) #34	TRIM35 (ENSANAG00000034109) #35	STMN4 (ENSANAG00000021238) #37	ENSANAG00000032951	ADRA1A (ENSANAG00000022712)	ENSANAG00000034640	DPYSL2 (ENSANAG00000034307)
Tarsier	MODERN SPECIES	5918													ZNF395 (ENSTSYG00000031984) #19	PNOC (ENSTSYG00000000621) #20	ELP3 (ENSTSYG00000007851) #21	NUGGC (ENSTSYG00000011832) #22	SCARA5 (ENSTSYG00000031613) #23	PBK (ENSTSYG00000003556) #24	ESCO2 (ENSTSYG00000009947) #25	ENSTSYG00000000732 #26	ENSTSYG00000037574	SCARA3 (ENSTSYG00000008415) #27	CLU (ENSTSYG00000001328) #28
Strepsirrhini	ANCESTRAL SPECIES	25	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b
Lemuriformes	ANCESTRAL SPECIES	32	ENSGT00940000171197	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b
Mouse lemur	MODERN SPECIES	12	PINX1 (ENSMICG00000044679)	SOX7 (ENSMICG00000009404)	ENSMICG00000015858	PRSS55 (ENSMICG00000009385) #9	ENSMICG00000044327	MSRA (ENSMICG00000043288) #12	KIF13B (ENSMICG00000010427) #13	HMBOX1 (ENSMICG00000010422) #14	INTS9 (ENSMICG00000010411) #15	EXTL3 (ENSMICG00000027437) #16	FZD3 (ENSMICG00000002985) #17	FBXO16 (ENSMICG00000036274) #18	ZNF395 (ENSMICG00000011993) #19	PNOC (ENSMICG00000043478) #20	ELP3 (ENSMICG00000011977) #21	NUGGC (ENSMICG00000030884) #22	SCARA5 (ENSMICG00000038705) #23	PBK (ENSMICG00000001285) #24	ESCO2 (ENSMICG00000029625) #25	CCDC25 (ENSMICG00000042632) #26	SCARA3 (ENSMICG00000035553) #27	CLU (ENSMICG00000007720) #28	ENSMICG00000028711 #29	ENSMICG00000007709 #31	CHRNA2 (ENSMICG00000007702) #33	PTK2B (ENSMICG00000007677) #34	TRIM35 (ENSMICG00000038500) #35	STMN4 (ENSMICG00000012281) #37	ENSMICG00000026774	ADRA1A (ENSMICG00000015812)	DPYSL2 (ENSMICG00000015794)
Lemuriformes_a	ANCESTRAL SPECIES	34	ENSGT00940000171197	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b
Coquerels sifaka	MODERN SPECIES	604		ENSPCOG00000028161	ENSPCOG00000019612	PRSS55 (ENSPCOG00000024420) #9	ENSPCOG00000017078	MSRA (ENSPCOG00000025498) #12	KIF13B (ENSPCOG00000024630) #13	HMBOX1 (ENSPCOG00000018119) #14	INTS9 (ENSPCOG00000026338) #15	EXTL3 (ENSPCOG00000008934) #16	FZD3 (ENSPCOG00000016331) #17	FBXO16 (ENSPCOG00000019089) #18	ZNF395 (ENSPCOG00000020739) #19	PNOC (ENSPCOG00000022608) #20	ELP3 (ENSPCOG00000014687) #21	NUGGC (ENSPCOG00000018815) #22	SCARA5 (ENSPCOG00000020054) #23
Greater bamboo lemur	MODERN SPECIES	236	ENSPSMG00000011750	ENSPSMG00000011741 #8	PRSS55 (ENSPSMG00000011735) #9	PRSS51 (ENSPSMG00000011719) #10	ENSPSMG00000011711 #11	MSRA (ENSPSMG00000011658) #12	KIF13B (ENSPSMG00000011561) #13	HMBOX1 (ENSPSMG00000011458) #14	INTS9 (ENSPSMG00000011383) #15	EXTL3 (ENSPSMG00000011315) #16	FZD3 (ENSPSMG00000011295) #17	FBXO16 (ENSPSMG00000011278) #18	ZNF395 (ENSPSMG00000011230) #19	PNOC (ENSPSMG00000011213) #20	ELP3 (ENSPSMG00000011191) #21	NUGGC (ENSPSMG00000011148) #22	SCARA5 (ENSPSMG00000011126) #23	PBK (ENSPSMG00000011100) #24	ESCO2 (ENSPSMG00000011084) #25	CCDC25 (ENSPSMG00000011072) #26	SCARA3 (ENSPSMG00000011055) #27	CLU (ENSPSMG00000011031) #28	ENSPSMG00000011018 #29	EPHX2 (ENSPSMG00000010900) #31	CHRNA2 (ENSPSMG00000010720) #33	PTK2B (ENSPSMG00000010424) #34	TRIM35 (ENSPSMG00000010142) #35	STMN4 (ENSPSMG00000010113) #37	ADRA1A (ENSPSMG00000010078)	DPYSL2 (ENSPSMG00000009959)	PNMA2 (ENSPSMG00000009835)
Bushbaby	MODERN SPECIES	189	C8orf74 (ENSOGAG00000016956) #7	ENSOGAG00000032424 #8	PRSS55 (ENSOGAG00000014201) #9	ENSOGAG00000031709 #10	ENSOGAG00000030697 ##10	MSRA (ENSOGAG00000014203) #12	ENSOGAG00000008477	KIF13B (ENSOGAG00000001382) #13	HMBOX1 (ENSOGAG00000001381) #14	INTS9 (ENSOGAG00000015946) #15	EXTL3 (ENSOGAG00000002322) #16	FZD3 (ENSOGAG00000030202) #17	FBXO16 (ENSOGAG00000030753) #18	ZNF395 (ENSOGAG00000012747) #19	ELP3 (ENSOGAG00000000230) #21	NUGGC (ENSOGAG00000000229) #22	SCARA5 (ENSOGAG00000031847) #23	PBK (ENSOGAG00000009887) #24	ESCO2 (ENSOGAG00000011834) #25	CCDC25 (ENSOGAG00000011829) #26	SCARA3 (ENSOGAG00000031170) #27	CLU (ENSOGAG00000030580) #28	ENSOGAG00000026271 #29	EPHX2 (ENSOGAG00000003192) #31	CHRNA2 (ENSOGAG00000033591) #33	PTK2B (ENSOGAG00000003185) #34	TRIM35 (ENSOGAG00000027382) #35	STMN4 (ENSOGAG00000010549) #37	ADRA1A (ENSOGAG00000026801)	DPYSL2 (ENSOGAG00000011250)	PNMA2 (ENSOGAG00000011246)
Laurasiatheria	ANCESTRAL SPECIES	24	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00950000185466	ENSGT00940000158598 #25	ENSGT00950000185082	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00950000185466	ENSGT00940000158598 #25	ENSGT00950000185082	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105
Artiodactyla	ANCESTRAL SPECIES	7	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00950000185082	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Suina	ANCESTRAL SPECIES	42	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00950000185082	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Pig	MODERN SPECIES	5	ENSSSCG00000060564 #9	PRSS51 (ENSSSCG00000037519) #10	ENSSSCG00000009685 #11	ENSSSCG00000046109	MSRA (ENSSSCG00000009684) #12	KIF13B (ENSSSCG00000009683) #13	HMBOX1 (ENSSSCG00000009682) #14	INTS9 (ENSSSCG00000009681) #15	EXTL3 (ENSSSCG00000009680) #16	FZD3 (ENSSSCG00000009679) #17	FBXO16 (ENSSSCG00000052939) #18	ENSSSCG00000058717	ZNF395 (ENSSSCG00000009676) #19	PNOC (ENSSSCG00000032600) #20	ELP3 (ENSSSCG00000009674) #21	NUGGC (ENSSSCG00000009673) #22	ENSSSCG00000009672 #23	PBK (ENSSSCG00000009671) #24	ENSSSCG00000009670 #25	ENSSSCG00000050594	CCDC25 (ENSSSCG00000024972) #26	SCARA3 (ENSSSCG00000020846) #27	CLU (ENSSSCG00000009668) #28	ENSSSCG00000009667 #29	EPHX2 (ENSSSCG00000009666) #31	CHRNA2 (ENSSSCG00000009665) #33	PTK2B (ENSSSCG00000009664) #34	TRIM35 (ENSSSCG00000033325) #35	STMN4 (ENSSSCG00000009662) #37	ADRA1A (ENSSSCG00000009661)	DPYSL2 (ENSSSCG00000030130)
Chacoan peccary	MODERN SPECIES	813	C8orf74 (ENSCWAG00000018590) #7	ENSCWAG00000018625 #8	PRSS55 (ENSCWAG00000018635) #9	PRSS51 (ENSCWAG00000018695) #10	ENSCWAG00000018731 #11	MSRA (ENSCWAG00000018777) #12	ENSCWAG00000018799 #13	HMBOX1 (ENSCWAG00000018877) #14	INTS9 (ENSCWAG00000018933) #15	EXTL3 (ENSCWAG00000019022) #16	FZD3 (ENSCWAG00000019052) #17	FBXO16 (ENSCWAG00000019090) #18	ZNF395 (ENSCWAG00000019168) #19	PNOC (ENSCWAG00000008025) #20	ELP3 (ENSCWAG00000008132) #21	NUGGC (ENSCWAG00000008378) #22	SCARA5 (ENSCWAG00000008565) #23	PBK (ENSCWAG00000009029) #24	ESCO2 (ENSCWAG00000009108) #25	CCDC25 (ENSCWAG00000009241) #26	SCARA3 (ENSCWAG00000009341) #27	CLU (ENSCWAG00000009499) #28	ENSCWAG00000009543 #29	EPHX2 (ENSCWAG00000009691) #31	CHRNA2 (ENSCWAG00000010830) #33	PTK2B (ENSCWAG00000011805) #34	TRIM35 (ENSCWAG00000011889) #35	STMN4 (ENSCWAG00000011950) #37	ADRA1A (ENSCWAG00000012091)	DPYSL2 (ENSCWAG00000012142)	PNMA2 (ENSCWAG00000012323)
Artiodactyla_a	ANCESTRAL SPECIES	6	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b
Artiodactyla_b	ANCESTRAL SPECIES	7	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b
Cetacea	ANCESTRAL SPECIES	9	ENSGT00940000161092	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00390000006350.m.a.c.b.a.b	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Odontoceti	ANCESTRAL SPECIES	8	ENSGT00940000161092	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00390000006350.m.a.c.b.a.b	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Odontoceti_a	ANCESTRAL SPECIES	15	ENSGT00940000161092	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00390000006350.m.a.c.b.a.b	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Odontoceti_b	ANCESTRAL SPECIES	8	ENSGT00940000161092	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00390000006350.m.a.c.b.a.b	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Monodontidae	ANCESTRAL SPECIES	5	ENSGT01100000263537.b.b.c.a.b	ENSGT00940000156147	ENSGT00390000014113	ENSGT00940000155613	ENSGT00440000038430	ENSGT00940000156613	ENSGT00940000156816.i	ENSGT00910000146847	ENSGT00940000155937	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00390000006350.m.a.c.b.a.b	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Narwhal	MODERN SPECIES	312	SOX7 (ENSMMNG00015015963)	C8orf74 (ENSMMNG00015015998) #7	ENSMMNG00015016048 #8	ENSMMNG00015016085 #9	MSRA (ENSMMNG00015016143) #12	KIF13B (ENSMMNG00015016238) #13	HMBOX1 (ENSMMNG00015016519) #14	INTS9 (ENSMMNG00015016594) #15	ENSMMNG00015016647	EXTL3 (ENSMMNG00015016669) #16	FZD3 (ENSMMNG00015016699) #17	FBXO16 (ENSMMNG00015016791) #18	ZNF395 (ENSMMNG00015016926) #19	PNOC (ENSMMNG00015016968) #20	ELP3 (ENSMMNG00015017014) #21	NUGGC (ENSMMNG00015017103) #22	SCARA5 (ENSMMNG00015017197) #23	PBK (ENSMMNG00015017312) #24	ESCO2 (ENSMMNG00015017357) #25	CCDC25 (ENSMMNG00015017427) #26	SCARA3 (ENSMMNG00015017508) #27	CLU (ENSMMNG00015017554) #28	ENSMMNG00015017581 #29	EPHX2 (ENSMMNG00015017668) #31	ENSMMNG00015017835	CHRNA2 (ENSMMNG00015017861) #33	PTK2B (ENSMMNG00015017976) #34	TRIM35 (ENSMMNG00015018089) #35	STMN4 (ENSMMNG00015018331) #37	ADRA1A (ENSMMNG00015018492)	DPYSL2 (ENSMMNG00015018544)
Beluga whale	MODERN SPECIES	4	C8orf74 (ENSDLEG00000000430) #7	ENSDLEG00000000449 #8	PRSS55 (ENSDLEG00000000456) #9	MSRA (ENSDLEG00000000471) #12	ENSDLEG00000000488	KIF13B (ENSDLEG00000000516) #13	HMBOX1 (ENSDLEG00000000560) #14	INTS9 (ENSDLEG00000000607) #15	ENSDLEG00000000634	EXTL3 (ENSDLEG00000000646) #16	FZD3 (ENSDLEG00000000662) #17	FBXO16 (ENSDLEG00000000679) #18	ZNF395 (ENSDLEG00000000713) #19	PNOC (ENSDLEG00000000739) #20	ELP3 (ENSDLEG00000000751) #21	NUGGC (ENSDLEG00000000778) #22	SCARA5 (ENSDLEG00000000809) #23	PBK (ENSDLEG00000000821) #24	ESCO2 (ENSDLEG00000000836) #25	CCDC25 (ENSDLEG00000000874) #26	SCARA3 (ENSDLEG00000000924) #27	CLU (ENSDLEG00000000957) #28	ENSDLEG00000000969 #29	EPHX2 (ENSDLEG00000001005) #31	ENSDLEG00000001060	CHRNA2 (ENSDLEG00000001068) #33	PTK2B (ENSDLEG00000001086) #34	TRIM35 (ENSDLEG00000001119) #35	STMN4 (ENSDLEG00000001142) #37	ADRA1A (ENSDLEG00000001167)	DPYSL2 (ENSDLEG00000001186)
Vaquita	MODERN SPECIES	17	SOX7 (ENSPSNG00000014840)	C8orf74 (ENSPSNG00000014667) #7	ENSPSNG00000014541 #8	ENSPSNG00000014513 #9	ENSPSNG00000014413 #11	MSRA (ENSPSNG00000014246) #12	ENSPSNG00000014157 #13	HMBOX1 (ENSPSNG00000013934) #14	INTS9 (ENSPSNG00000013626) #15	EXTL3 (ENSPSNG00000013526) #16	FZD3 (ENSPSNG00000013472) #17	FBXO16 (ENSPSNG00000013266) #18	ZNF395 (ENSPSNG00000013118) #19	PNOC (ENSPSNG00000013048) #20	ELP3 (ENSPSNG00000012827) #21	NUGGC (ENSPSNG00000012623) #22	SCARA5 (ENSPSNG00000012329) #23	PBK (ENSPSNG00000012263) #24	ESCO2 (ENSPSNG00000012224) #25	CCDC25 (ENSPSNG00000012132) #26	SCARA3 (ENSPSNG00000011999) #27	CLU (ENSPSNG00000011914) #28	ENSPSNG00000011878 #29	CHRNA2 (ENSPSNG00000011813) #33	PTK2B (ENSPSNG00000011703) #34	TRIM35 (ENSPSNG00000011632) #35	STMN4 (ENSPSNG00000011305) #37	ADRA1A (ENSPSNG00000011198)	DPYSL2 (ENSPSNG00000010930)	PNMA2 (ENSPSNG00000010857)	BNIP3L (ENSPSNG00000010778)
Dolphin	MODERN SPECIES	3983																NUGGC (ENSTTRG00000015905) #22
Blue whale	MODERN SPECIES	17	ENSBMSG00010012102	ENSBMSG00010012113 #8	PRSS55 (ENSBMSG00010012126) #9	MSRA (ENSBMSG00010012164) #12	ENSBMSG00010012227	ENSBMSG00010012240 #13	HMBOX1 (ENSBMSG00010000142) #14	INTS9 (ENSBMSG00010000191) #15	ENSBMSG00010000231	EXTL3 (ENSBMSG00010000259) #16	FZD3 (ENSBMSG00010000286) #17	FBXO16 (ENSBMSG00010000332) #18	ZNF395 (ENSBMSG00010000397) #19	PNOC (ENSBMSG00010000426) #20	ELP3 (ENSBMSG00010000472) #21	NUGGC (ENSBMSG00010000532) #22	SCARA5 (ENSBMSG00010000607) #23	PBK (ENSBMSG00010000730) #24	ESCO2 (ENSBMSG00010000749) #25	CCDC25 (ENSBMSG00010000771) #26	SCARA3 (ENSBMSG00010000815) #27	CLU (ENSBMSG00010000855) #28	ENSBMSG00010000884 #29	EPHX2 (ENSBMSG00010000918) #31	ENSBMSG00010000956	CHRNA2 (ENSBMSG00010000975) #33	PTK2B (ENSBMSG00010001018) #34	TRIM35 (ENSBMSG00010001057) #35	STMN4 (ENSBMSG00010001170) #37	ADRA1A (ENSBMSG00010001276)	DPYSL2 (ENSBMSG00010001313)
Pecora	ANCESTRAL SPECIES	36	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021.c #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b
Percora_a	ANCESTRAL SPECIES	24	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021.d #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839.l.a #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b
Bovidae	ANCESTRAL SPECIES	14	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021.d #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839.l.a #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B.a #28	ENSGT00390000006684	ENSGT00390000007535	ENSGT01100000264077	ENSGT00530000064170.e	ENSGT00940000153173.a	ENSGT00940000157772	ENSGT00950000185419	ENSGT00940000156665	ENSGT00390000005644
Bovinae	ANCESTRAL SPECIES	39	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021.d #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000008767.a.b	ENSGT00950000182967.a.a.a.a.a.a.n.d.b.a.b	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839.l.a #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B.a #28	ENSGT00390000013989.a.ab	ENSGT00390000005140.b.b.d	ENSGT00390000006684	ENSGT00390000007535	ENSGT01100000264077	ENSGT00530000064170.e	ENSGT00940000153173.a	ENSGT00940000157772	ENSGT00940000158555.i.b
Bos	ANCESTRAL SPECIES	10	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021.d #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000008767.a.b	ENSGT00950000182967.a.a.a.a.a.a.n.d.b.a.b	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839.l.a.a #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B.a #28	ENSGT00390000013989.a.ab.c.a	ENSGT00390000006684	ENSGT00390000007535	ENSGT01100000264077	ENSGT00530000064170.e	ENSGT00940000153173.a	ENSGT00940000157772	ENSGT00940000158555.i.b	ENSGT00950000185419
Bos_a	ANCESTRAL SPECIES	50	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021.d #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000008767.a.b	ENSGT00950000182967.a.a.a.a.a.a.n.d.b.a.b	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839.l.a.a #24	ENSGT00940000158598.i #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B.a #28	ENSGT00390000013989.a.ab.c.a	ENSGT00390000006684	ENSGT00390000007535	ENSGT01100000264077	ENSGT00530000064170.e	ENSGT00940000153173.a	ENSGT00940000157772	ENSGT00940000158555.i.b	ENSGT00730000110997.l
Domestic yak	MODERN SPECIES	26	ENSBGRG00000002363	ENSBGRG00000002358	MSRA (ENSBGRG00000002267) #12	ENSBGRG00000002206 #13	HMBOX1 (ENSBGRG00000002158) #14	INTS9 (ENSBGRG00000002069) #15	EXTL3 (ENSBGRG00000002025) #16	ENSBGRG00000002017 #18	ZNF395 (ENSBGRG00000001954) #19	ENSBGRG00000001926	PNOC (ENSBGRG00000001909) #20	ENSBGRG00000001891	ENSBGRG00000001885	ELP3 (ENSBGRG00000001836) #21	ENSBGRG00000001818	NUGGC (ENSBGRG00000001756) #22	SCARA5 (ENSBGRG00000001655) #23	ENSBGRG00000001612 #24	ENSBGRG00000001592 #25	CCDC25 (ENSBGRG00000001516) #26	SCARA3 (ENSBGRG00000001492) #27	ENSBGRG00000001476	ENSBGRG00000001455 #28	ENSBGRG00000001445	ENSBGRG00000001432	TMEM215 (ENSBGRG00000001425)	ENSBGRG00000001402	ENSBGRG00000001384	TOPORS (ENSBGRG00000001367)	ENSBGRG00000001348	RIGI (ENSBGRG00000001303)
Wild yak	MODERN SPECIES	1155								EXTL3 (ENSBMUG00000011033) #16	FZD3 (ENSBMUG00000011021) #17	ENSBMUG00000011006 #18	ZNF395 (ENSBMUG00000010982) #19	PNOC (ENSBMUG00000010949) #20	ENSBMUG00000010943	ENSBMUG00000010935	ELP3 (ENSBMUG00000010845) #21	NUGGC (ENSBMUG00000010743) #22	SCARA5 (ENSBMUG00000010671) #23	PBK (ENSBMUG00000010592) #24	ESCO2 (ENSBMUG00000010565) #25	CCDC25 (ENSBMUG00000010538) #26
Bos_b	ANCESTRAL SPECIES	3	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021.d #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00950000182967.a.a.a.a.a.a.n.d.b.a.b	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839.l.a.a #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B.a #28	ENSGT00390000013989.a.ab.c.a	ENSGT00390000006684	ENSGT00390000007535	ENSGT01100000264077	ENSGT00530000064170.e	ENSGT00940000153173.a	ENSGT00940000157772	ENSGT00950000185419	ENSGT00940000156665
Hybrid Bos Indicus	MODERN SPECIES	27	ENSBIXG00005004942 #8	PRSS55 (ENSBIXG00005028589) #9	PRSS51 (ENSBIXG00005028570) #10	MSRA (ENSBIXG00005028512) #12	ENSBIXG00005028432 #11	ENSBIXG00005028370 #13	HMBOX1 (ENSBIXG00005004868) #14	INTS9 (ENSBIXG00005028226) #15	EXTL3 (ENSBIXG00005028171) #16	FZD3 (ENSBIXG00005028137) #17	ENSBIXG00005028113 #18	ZNF395 (ENSBIXG00005028019) #19	ENSBIXG00005027879 #20	ENSBIXG00005004791	ELP3 (ENSBIXG00005027835) #21	NUGGC (ENSBIXG00005027718) #22	SCARA5 (ENSBIXG00005004753) #23	ENSBIXG00005027580 #24	ESCO2 (ENSBIXG00005027560) #25	CCDC25 (ENSBIXG00005004734) #26	SCARA3 (ENSBIXG00005027449) #27	ENSBIXG00005027363 #28	TMEM215 (ENSBIXG00005027309)	NDUFB6 (ENSBIXG00005027286)	ENSBIXG00005027238	TOPORS (ENSBIXG00005027224)	RIGI (ENSBIXG00005004673)	ACO1 (ENSBIXG00005027147)	ENSBIXG00005004636	ENSBIXG00005027020	ENSBIXG00005027001
Cow	MODERN SPECIES	27	RP1L1 (ENSBTAG00000020155) #8	PRSS55 (ENSBTAG00000034665) #9	MSRA (ENSBTAG00000021632) #12	ENSBTAG00000038291	ENSBTAG00000040038 #11	KIF13B (ENSBTAG00000017232) #13	HMBOX1 (ENSBTAG00000010819) #14	INTS9 (ENSBTAG00000008845) #15	EXTL3 (ENSBTAG00000008844) #16	FZD3 (ENSBTAG00000035084) #17	FBXO16 (ENSBTAG00000034626) #18	ZNF395 (ENSBTAG00000000536) #19	PNOC (ENSBTAG00000000534) #20	ENSBTAG00000054551	ELP3 (ENSBTAG00000002730) #21	NUGGC (ENSBTAG00000011321) #22	SCARA5 (ENSBTAG00000019636) #23	PBK (ENSBTAG00000021069) #24	ESCO2 (ENSBTAG00000006551) #25	CCDC25 (ENSBTAG00000006547) #26	SCARA3 (ENSBTAG00000007657) #27	CLU (ENSBTAG00000005574) #28	ENSBTAG00000034560	TMEM215 (ENSBTAG00000013974)	NDUFB6 (ENSBTAG00000005907)	TOPORS (ENSBTAG00000005905)	RIGI (ENSBTAG00000003366)	ACO1 (ENSBTAG00000000555)	ENSBTAG00000052065	ENSBTAG00000018340	ENSBTAG00000050975
American bison	MODERN SPECIES	3066	PRSS55 (ENSBBBG00000024534) #9	PRSS51 (ENSBBBG00000024522) #10	ENSBBBG00000024513 #11	MSRA (ENSBBBG00000024509) #12	ENSBBBG00000024420 #13	HMBOX1 (ENSBBBG00000024381) #14	INTS9 (ENSBBBG00000024337) #15	EXTL3 (ENSBBBG00000006297) #16	FZD3 (ENSBBBG00000024196) #17	ENSBBBG00000007807 #18	ZNF395 (ENSBBBG00000006273) #19	PNOC (ENSBBBG00000024099) #20	ENSBBBG00000024093	ENSBBBG00000006262	ELP3 (ENSBBBG00000006255) #21	NUGGC (ENSBBBG00000023948) #22	ZFP64 (ENSBBBG00000023903)	ENSBBBG00000008855	BCAS1 (ENSBBBG00000023792)	CYP24A1 (ENSBBBG00000023751)	ENSBBBG00000023699	DOK5 (ENSBBBG00000023680)	ENSBBBG00000023664
Caprinae	ANCESTRAL SPECIES	43	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021.c.c #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839.l.a #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B.a #28	ENSGT00390000006684	ENSGT00390000007535	ENSGT00530000064170.e	ENSGT00940000153173.a	ENSGT00940000157772	ENSGT00940000156665	ENSGT00390000005644	ENSGT01050000244898.a.a.a.b	ENSGT01000000214430.b
Rambouillet Sheep	MODERN SPECIES	11	C8orf74 (ENSOARG00020007527) #7	PRSS55 (ENSOARG00020007475) #9	PRSS51 (ENSOARG00020007420) #10	ENSOARG00020007386 #11	MSRA (ENSOARG00020007105) #12	ENSOARG00020007036	KIF13B (ENSOARG00020006646) #13	HMBOX1 (ENSOARG00020006289) #14	INTS9 (ENSOARG00020006140) #15	EXTL3 (ENSOARG00020006102) #16	FZD3 (ENSOARG00020006061) #17	FBXO16 (ENSOARG00020005917) #18	ZNF395 (ENSOARG00020005891) #19	PNOC (ENSOARG00020011467) #20	ELP3 (ENSOARG00020010811) #21	NUGGC (ENSOARG00020010690) #22	SCARA5 (ENSOARG00020010482) #23	PBK (ENSOARG00020010392) #24	ESCO2 (ENSOARG00020010286) #25	ENSOARG00020010095 #26	ENSOARG00020010017	SCARA3 (ENSOARG00020009895) #27	ENSOARG00020009753 #28	TMEM215 (ENSOARG00020009741)	NDUFB6 (ENSOARG00020009670)	ENSOARG00020009633	RIGI (ENSOARG00020009445)	ACO1 (ENSOARG00020009310)	ENSOARG00020009264	ENSOARG00020009228	ENSOARG00020009145
Goat	MODERN SPECIES	27	ENSCHIG00000002212 #9	PRSS51 (ENSCHIG00000012314) #10	MSRA (ENSCHIG00000014457) #12	KIF13B (ENSCHIG00000011751) #13	HMBOX1 (ENSCHIG00000003424) #14	ENSCHIG00000023976	INTS9 (ENSCHIG00000012847) #15	EXTL3 (ENSCHIG00000027229) #16	FZD3 (ENSCHIG00000023532) #17	ENSCHIG00000013264 #18	ZNF395 (ENSCHIG00000013915) #19	PNOC (ENSCHIG00000027029) #20	ENSCHIG00000011279	ENSCHIG00000011858	ELP3 (ENSCHIG00000025755) #21	NUGGC (ENSCHIG00000016874) #22	SCARA5 (ENSCHIG00000002743) #23	ENSCHIG00000003841 #24	ENSCHIG00000008066	ENSCHIG00000021742	ESCO2 (ENSCHIG00000012950) #25	CCDC25 (ENSCHIG00000005126) #26	SCARA3 (ENSCHIG00000025164) #27	ENSCHIG00000010216 #28	TMEM215 (ENSCHIG00000008408)	NDUFB6 (ENSCHIG00000027260)	TOPORS (ENSCHIG00000012805)	RIGI (ENSCHIG00000025883)	ACO1 (ENSCHIG00000007667)	ENSCHIG00000020484	ENSCHIG00000024316
Siberian musk deer	MODERN SPECIES	82	ENSMMSG00000002664 #8	PRSS55 (ENSMMSG00000002646) #9	PRSS51 (ENSMMSG00000002628) #10	ENSMMSG00000002600 #11	MSRA (ENSMMSG00000002535) #12	KIF13B (ENSMMSG00000002322) #13	HMBOX1 (ENSMMSG00000002228) #14	INTS9 (ENSMMSG00000002117) #15	EXTL3 (ENSMMSG00000002080) #16	FZD3 (ENSMMSG00000002043) #17	FBXO16 (ENSMMSG00000001979) #18	ZNF395 (ENSMMSG00000001932) #19	PNOC (ENSMMSG00000001909) #20	ENSMMSG00000001898	ELP3 (ENSMMSG00000001831) #21	NUGGC (ENSMMSG00000001781) #22	SCARA5 (ENSMMSG00000001725) #23	PBK (ENSMMSG00000001701) #24	ESCO2 (ENSMMSG00000001669) #25	CCDC25 (ENSMMSG00000001626) #26
Yarkand deer	MODERN SPECIES	21	PRSS55 (ENSCHYG00000014505) #9	PRSS51 (ENSCHYG00000014535) #10	MSRA (ENSCHYG00000014594) #12	ENSCHYG00000015022 #11	ENSCHYG00000015172	ENSCHYG00000015382 #13	HMBOX1 (ENSCHYG00000015530) #14	INTS9 (ENSCHYG00000015677) #15	EXTL3 (ENSCHYG00000015963) #16	FZD3 (ENSCHYG00000016136) #17	FBXO16 (ENSCHYG00000016230) #18	ZNF395 (ENSCHYG00000016677) #19	PNOC (ENSCHYG00000016913) #20	ELP3 (ENSCHYG00000016990) #21	ENSCHYG00000017432	NUGGC (ENSCHYG00000017462) #22	SCARA5 (ENSCHYG00000017643) #23	ENSCHYG00000018012 #24	ENSCHYG00000018111	ENSCHYG00000018155 #25	CCDC25 (ENSCHYG00000018352) #26	SCARA3 (ENSCHYG00000018537) #27	ENSCHYG00000018750 #28	ENSCHYG00000019042	TMEM215 (ENSCHYG00000019068)	NDUFB6 (ENSCHYG00000019107)	ENSCHYG00000019247	TOPORS (ENSCHYG00000019297)	ACO1 (ENSCHYG00000019470)	ENSCHYG00000020855	ENSCHYG00000020942
Camelidae	ANCESTRAL SPECIES	47	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b
Arabian camel	MODERN SPECIES	24	C8orf74 (ENSCDRG00005009992) #7	ENSCDRG00005009970 #8	PRSS55 (ENSCDRG00005009845) #9	PRSS51 (ENSCDRG00005009746) #10	ENSCDRG00005009697 #11	MSRA (ENSCDRG00005009111) #12	KIF13B (ENSCDRG00005020092) #13	HMBOX1 (ENSCDRG00005020044) #14	INTS9 (ENSCDRG00005019980) #15	EXTL3 (ENSCDRG00005019966) #16	FZD3 (ENSCDRG00005019948) #17	FBXO16 (ENSCDRG00005019861) #18	ZNF395 (ENSCDRG00005019830) #19	PNOC (ENSCDRG00005019815) #20	ELP3 (ENSCDRG00005019750) #21	NUGGC (ENSCDRG00005019727) #22	SCARA5 (ENSCDRG00005019702) #23	PBK (ENSCDRG00005019667) #24	ESCO2 (ENSCDRG00005019654) #25	CCDC25 (ENSCDRG00005019631) #26	SCARA3 (ENSCDRG00005019603) #27	CLU (ENSCDRG00005019585) #28	ENSCDRG00005019569 #29	EPHX2 (ENSCDRG00005019465) #31	CHRNA2 (ENSCDRG00005019402) #33	PTK2B (ENSCDRG00005019294) #34	TRIM35 (ENSCDRG00005019253) #35	STMN4 (ENSCDRG00005019200) #37	ENSCDRG00005019174	ADRA1A (ENSCDRG00005019146)	DPYSL2 (ENSCDRG00005018995)
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00950000185466	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Carnivora	ANCESTRAL SPECIES	5	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00950000185466	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Caniformia	ANCESTRAL SPECIES	7	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00950000185466	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823.d #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00390000000378.d.b.db.b	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Ursidae	ANCESTRAL SPECIES	17	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823.d #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B.d #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00390000000378.d.b.db.b
Ursus	ANCESTRAL SPECIES	115	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT01030000234551.k.d.a.c	ENSGT00940000154999.B.k #11	ENSGT00390000003823.d #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B.d #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00390000000378.d.b.db.b
Polar bear	MODERN SPECIES	269	PINX1 (ENSUMAG00000021812)	C8orf74 (ENSUMAG00000021814) #7	ENSUMAG00000021815 #8	PRSS55 (ENSUMAG00000021816) #9	ENSUMAG00000021817	ENSUMAG00000021819 #11	MSRA (ENSUMAG00000021822) #12	KIF13B (ENSUMAG00000021894) #13	HMBOX1 (ENSUMAG00000022119) #14	INTS9 (ENSUMAG00000022190) #15	EXTL3 (ENSUMAG00000022456) #16	FZD3 (ENSUMAG00000022459) #17	FBXO16 (ENSUMAG00000022474) #18	ZNF395 (ENSUMAG00000022490) #19	ELP3 (ENSUMAG00000022494) #21	NUGGC (ENSUMAG00000022498) #22	SCARA5 (ENSUMAG00000022508) #23	PBK (ENSUMAG00000022515) #24	ESCO2 (ENSUMAG00000022519) #25	CCDC25 (ENSUMAG00000000103) #26	SCARA3 (ENSUMAG00000000172) #27	CLU (ENSUMAG00000000329) #28	ENSUMAG00000000345 #29	EPHX2 (ENSUMAG00000000481) #31	CHRNA2 (ENSUMAG00000000675) #33	PTK2B (ENSUMAG00000000711) #34	TRIM35 (ENSUMAG00000000742) #35	STMN4 (ENSUMAG00000000750) #37	ENSUMAG00000000826
American black bear	MODERN SPECIES	2395															ELP3 (ENSUAMG00000013474) #21	NUGGC (ENSUAMG00000013467) #22
Giant Panda	MODERN SPECIES	15	ENSAMEG00000016125 #8	PRSS55 (ENSAMEG00000016120) #9	ENSAMEG00000016119 #10	ENSAMEG00000016111 #11	ENSAMEG00000027744	ENSAMEG00000016109 #12	ENSAMEG00000016039 #13	HMBOX1 (ENSAMEG00000016028) #14	INTS9 (ENSAMEG00000015995) #15	EXTL3 (ENSAMEG00000015984) #16	FZD3 (ENSAMEG00000015975) #17	FBXO16 (ENSAMEG00000015968) #18	ZNF395 (ENSAMEG00000003309) #19	PNOC (ENSAMEG00000003325) #20	ELP3 (ENSAMEG00000000124) #21	NUGGC (ENSAMEG00000000131) #22	SCARA5 (ENSAMEG00000000133) #23	PBK (ENSAMEG00000000135) #24	ESCO2 (ENSAMEG00000000137) #25	CCDC25 (ENSAMEG00000000139) #26	SCARA3 (ENSAMEG00000000140) #27	CLU (ENSAMEG00000000141) #28	ENSAMEG00000000147 #29	EPHX2 (ENSAMEG00000000158) #31	CHRNA2 (ENSAMEG00000000168) #33	PTK2B (ENSAMEG00000000174) #34	ENSAMEG00000000207 #35	ENSAMEG00000000209 #37	ENSAMEG00000026433	ENSAMEG00000031090	ENSAMEG00000005638
Mustelinae	ANCESTRAL SPECIES	82						ENSGT00390000003823.c #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00390000000378.d.b.db.b	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Ferret	MODERN SPECIES	369						ENSMPUG00000001073 #13	HMBOX1 (ENSMPUG00000001070) #14	INTS9 (ENSMPUG00000000997) #15	EXTL3 (ENSMPUG00000000995) #16	FZD3 (ENSMPUG00000000981) #17	FBXO16 (ENSMPUG00000000979) #18	ZNF395 (ENSMPUG00000000974) #19	PNOC (ENSMPUG00000000972) #20	ENSMPUG00000000971	ELP3 (ENSMPUG00000000966) #21	NUGGC (ENSMPUG00000000959) #22	SCARA5 (ENSMPUG00000000953) #23	PBK (ENSMPUG00000000915) #24	ESCO2 (ENSMPUG00000000909) #25	CCDC25 (ENSMPUG00000000908) #26	SCARA3 (ENSMPUG00000000906) #27	CLU (ENSMPUG00000000903) #28	ENSMPUG00000000883 #29	EPHX2 (ENSMPUG00000000882) #31	CHRNA2 (ENSMPUG00000000876) #33	PTK2B (ENSMPUG00000000875) #34	TRIM35 (ENSMPUG00000000873) #35	ENSMPUG00000000872	STMN4 (ENSMPUG00000000871) #37	ENSMPUG00000000868	ADRA1A (ENSMPUG00000000865)
American mink	MODERN SPECIES	253						ENSNVIG00000005841 #12	ENSNVIG00000005852 #13	HMBOX1 (ENSNVIG00000005932) #14	INT9 (ENSNVIG00000006207) #15	EXTL3 (ENSNVIG00000006368) #16	FZD3 (ENSNVIG00000006391) #17	FBXO16 (ENSNVIG00000006404) #18	ZN395 (ENSNVIG00000006450) #19	PNOC (ENSNVIG00000006508) #20	ELP3 (ENSNVIG00000006520) #21	NUGGC (ENSNVIG00000006619) #22	SCARA5 (ENSNVIG00000006662) #23	PBK (ENSNVIG00000006715) #24	ESCO2 (ENSNVIG00000006733) #25	CCDC25 (ENSNVIG00000006767) #26	SCARA3 (ENSNVIG00000006779) #27	CLU (ENSNVIG00000006796) #28	ENSNVIG00000006816 #29	EPHX2 (ENSNVIG00000006844) #31	CHRNA2 (ENSNVIG00000006884) #33	PTK2B (ENSNVIG00000006919) #34	TRIM35 (ENSNVIG00000007132) #35	STMN4 (ENSNVIG00000007161) #37
Canidae	ANCESTRAL SPECIES	31	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839.m #24	ENSGT00950000185466	ENSGT00940000158598 #25	ENSGT00390000004380.f #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Canis_lupus	ANCESTRAL SPECIES	18	ENSGT00940000154242.a #8	ENSGT00940000153973.c.b.c.a	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021.f #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839.m #24	ENSGT00940000158598 #25	ENSGT00390000004380.f #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT00980000202976	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a
Dog	MODERN SPECIES	17	PRSS55 (ENSCAFG00845020196) #9	PRSS51 (ENSCAFG00845020294) #10	ENSCAFG00845020342 #11	ENSCAFG00845020456 #12	ENSCAFG00845020701	ENSCAFG00845020798 #13	HMBOX1 (ENSCAFG00845021327) #14	INTS9 (ENSCAFG00845021872) #15	EXTL3 (ENSCAFG00845022066) #16	FZD3 (ENSCAFG00845022244) #17	FBXO16 (ENSCAFG00845022415) #18	ZNF395 (ENSCAFG00845008517) #19	PNOC (ENSCAFG00845008618) #20	ENSCAFG00845008692	ELP3 (ENSCAFG00845008841) #21	NUGGC (ENSCAFG00845009140) #22	SCARA5 (ENSCAFG00845009520) #23	ENSCAFG00845009826 #24	ESCO2 (ENSCAFG00845009996) #25	CCDC25 (ENSCAFG00845010181) #26	SCARA3 (ENSCAFG00845010317) #27	CLU (ENSCAFG00845010565) #28	ENSCAFG00845010841 #29	EPHX2 (ENSCAFG00845011024) #31	CHRNA2 (ENSCAFG00845011451) #33	PTK2B (ENSCAFG00845011700) #34	TRIM35 (ENSCAFG00845012423) #35	ENSCAFG00845012522	STMN4 (ENSCAFG00845012672) #37	ADRA1A (ENSCAFG00845012931)	DPYSL2 (ENSCAFG00845013099)
Red fox	MODERN SPECIES	67	PRSS55 (ENSVVUG00000002362) #9	ENSVVUG00000002367	ENSVVUG00000002373 #11	ENSVVUG00000002393	ENSVVUG00000002460	MSRA (ENSVVUG00000002475) #12	KIF13B (ENSVVUG00000002590) #13	HMBOX1 (ENSVVUG00000003129) #14	INTS9 (ENSVVUG00000003168) #15	EXTL3 (ENSVVUG00000003194) #16	FZD3 (ENSVVUG00000003219) #17	FBXO16 (ENSVVUG00000003232) #18	ZNF395 (ENSVVUG00000003247) #19	PNOC (ENSVVUG00000003259) #20	ELP3 (ENSVVUG00000003271) #21	NUGGC (ENSVVUG00000003454) #22	SCARA5 (ENSVVUG00000003462) #23	PBK (ENSVVUG00000003472) #24	ENSVVUG00000003476	ESCO2 (ENSVVUG00000003477) #25	ENSVVUG00000003486 #26	SCARA3 (ENSVVUG00000003490) #27	CLU (ENSVVUG00000003495) #28	ENSVVUG00000003499 #29	EPHX2 (ENSVVUG00000003509) #31	CHRNA2 (ENSVVUG00000003529) #33	PTK2B (ENSVVUG00000003546) #34	TRIM35 (ENSVVUG00000003575) #35	STMN4 (ENSVVUG00000003585) #37	ADRA1A (ENSVVUG00000003602)	ENSVVUG00000003623
Felidae	ANCESTRAL SPECIES	4	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159152.d	ENSGT00940000158107	ENSGT00390000015489.q.a.a.b
Panthera	ANCESTRAL SPECIES	5	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000164622	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159152.d	ENSGT00940000158107	ENSGT00390000015489.q.a.a.b
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000164622	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159152.d	ENSGT00940000158107	ENSGT00390000015489.q.a.a.b
leopard	MODERN SPECIES	6	PINX1 (ENSPPRG00000011818)	SOX7 (ENSPPRG00000012019)	C8orf74 (ENSPPRG00000012122) #7	PRSS55 (ENSPPRG00000012714) #9	ENSPPRG00000013777	MSRA (ENSPPRG00000018518) #12	ENSPPRG00000022622 #13	HMBOX1 (ENSPPRG00000003376) #14	INTS9 (ENSPPRG00000005064) #15	EXTL3 (ENSPPRG00000005912) #16	FZD3 (ENSPPRG00000006050) #17	FBXO16 (ENSPPRG00000007009) #18	ZNF395 (ENSPPRG00000008303) #19	PNOC (ENSPPRG00000008661) #20	ELP3 (ENSPPRG00000010984) #21	NUGGC (ENSPPRG00000012192) #22	SCARA5 (ENSPPRG00000013681) #23	PBK (ENSPPRG00000014626) #24	ESCO2 (ENSPPRG00000017551) #25	CCDC25 (ENSPPRG00000020269) #26	SCARA3 (ENSPPRG00000022181) #27	CLU (ENSPPRG00000023295) #28	ENSPPRG00000022640 #29	EPHX2 (ENSPPRG00000000549) #31	CHRNA2 (ENSPPRG00000001723) #33	PTK2B (ENSPPRG00000007277) #34	TRIM35 (ENSPPRG00000008006) #35	STMN4 (ENSPPRG00000009329) #37	RNF122 (ENSPPRG00000009660)	DUSP26 (ENSPPRG00000009759)	ENSPPRG00000016166
lion	MODERN SPECIES	4	C8orf74 (ENSPLOG00000000422) #7	ENSPLOG00000000405 #8	PRSS55 (ENSPLOG00000000388) #9	PRSS51 (ENSPLOG00000000373) #10	MSRA (ENSPLOG00000000334) #12	ENSPLOG00000000291 #13	HMBOX1 (ENSPLOG00000000271) #14	INTS9 (ENSPLOG00000000238) #15	EXTL3 (ENSPLOG00000000205) #16	FZD3 (ENSPLOG00000000194) #17	FBXO16 (ENSPLOG00000000175) #18	ZNF395 (ENSPLOG00000000156) #19	PNOC (ENSPLOG00000000143) #20	ENSPLOG00000000137	ELP3 (ENSPLOG00000000115) #21	NUGGC (ENSPLOG00000005183) #22	PBK (ENSPLOG00000005137) #24	ESCO2 (ENSPLOG00000005098) #25	CCDC25 (ENSPLOG00000005060) #26	SCARA3 (ENSPLOG00000005033) #27	CLU (ENSPLOG00000004952) #28	ENSPLOG00000004928 #29	EPHX2 (ENSPLOG00000004827) #31	CHRNA2 (ENSPLOG00000004735) #33	PTK2B (ENSPLOG00000004681) #34	TRIM35 (ENSPLOG00000004657) #35	STMN4 (ENSPLOG00000004643) #37	RNF122 (ENSPLOG00000004628)	DUSP26 (ENSPLOG00000004624)	ENSPLOG00000004619	UNC5D (ENSPLOG00000004558)
Tiger	MODERN SPECIES	550	PINX1 (ENSPTIG00000004845)	SOX7 (ENSPTIG00000003802)	C8orf74 (ENSPTIG00000022006) #7	PRSS55 (ENSPTIG00000021826) #9	ENSPTIG00000021489	MSRA (ENSPTIG00000018944) #12	HMBOX1 (ENSPTIG00000002489) #14	INTS9 (ENSPTIG00000018770) #15	EXTL3 (ENSPTIG00000018033) #16	FZD3 (ENSPTIG00000017535) #17	FBXO16 (ENSPTIG00000015539) #18	ZNF395 (ENSPTIG00000014215) #19	PNOC (ENSPTIG00000013469) #20	ENSPTIG00000013248	ELP3 (ENSPTIG00000010521) #21	NUGGC (ENSPTIG00000008187) #22	SCARA5 (ENSPTIG00000007329) #23	PBK (ENSPTIG00000006211) #24	ESCO2 (ENSPTIG00000004922) #25	CCDC25 (ENSPTIG00000019790) #26	SCARA3 (ENSPTIG00000018843) #27	CLU (ENSPTIG00000018269) #28	ENSPTIG00000016376 #29	EPHX2 (ENSPTIG00000006801) #31	CHRNA2 (ENSPTIG00000018878) #33	PTK2B (ENSPTIG00000009077) #34	TRIM35 (ENSPTIG00000008311) #35	STMN4 (ENSPTIG00000006056) #37	RNF122 (ENSPTIG00000003477)	DUSP26 (ENSPTIG00000000562)	ENSPTIG00000006393
Cat	MODERN SPECIES	235	CB1H8orf74 (ENSFCAG00000011260) #7	PRSS55 (ENSFCAG00000010556) #9	PRSS51 (ENSFCAG00000024892) #10	ENSFCAG00000050522 #11	MSRA (ENSFCAG00000011865) #12	KIF13B (ENSFCAG00000004923) #13	HMBOX1 (ENSFCAG00000022672) #14	INTS9 (ENSFCAG00000003520) #15	EXTL3 (ENSFCAG00000022501) #16	FZD3 (ENSFCAG00000024323) #17	FBXO16 (ENSFCAG00000019020) #18	ZNF395 (ENSFCAG00000030743) #19	PNOC (ENSFCAG00000023618) #20	ENSFCAG00000027676	ELP3 (ENSFCAG00000025121) #21	NUGGC (ENSFCAG00000002892) #22	SCARA5 (ENSFCAG00000031961) #23	PBK (ENSFCAG00000014427) #24	ESCO2 (ENSFCAG00000014426) #25	CCDC25 (ENSFCAG00000037880) #26	SCARA3 (ENSFCAG00000014424) #27	CLU (ENSFCAG00000014423) #28	GULO (ENSFCAG00000023835) #29	EPHX2 (ENSFCAG00000014422) #31	CHRNA2 (ENSFCAG00000028158) #33	PTK2B (ENSFCAG00000014420) #34	TRIM35 (ENSFCAG00000025046) #35	STMN4 (ENSFCAG00000014418) #37	RNF122 (ENSFCAG00000025628)	DUSP26 (ENSFCAG00000040176)	ENSFCAG00000034993
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b
Equus	ANCESTRAL SPECIES	24	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000156020.b.b #10	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT01030000234522.C.b.e.a.a.b
Donkey	MODERN SPECIES	22	PRSS55 (ENSEASG00005016390) #9	ENSEASG00005016388 #10	ENSEASG00005016386 #11	ENSEASG00005016382 #12	ENSEASG00005033370	ENSEASG00005016368 #13	ENSEASG00005037289	HMBOX1 (ENSEASG00005016360) #14	INTS9 (ENSEASG00005016353) #15	EXTL3 (ENSEASG00005016347) #16	FZD3 (ENSEASG00005016341) #17	FBXO16 (ENSEASG00005016336) #18	ZNF395 (ENSEASG00005016329) #19	PNOC (ENSEASG00005016327) #20	ELP3 (ENSEASG00005016324) #21	NUGGC (ENSEASG00005016323) #22	SCARA5 (ENSEASG00005016320) #23	PBK (ENSEASG00005016314) #24	ESCO2 (ENSEASG00005016302) #25	CCDC25 (ENSEASG00005037176) #26	SCARA3 (ENSEASG00005016295) #27	CLU (ENSEASG00005016294) #28	ENSEASG00005016285 #29	EPHX2 (ENSEASG00005016280) #31	CHRNA2 (ENSEASG00005016279) #33	PTK2B (ENSEASG00005015727) #34	TRIM35 (ENSEASG00005015643) #35	STMN4 (ENSEASG00005015641) #37	ADRA1A (ENSEASG00005015639)	DPYSL2 (ENSEASG00005015636)	BNIP3L (ENSEASG00005015633)
Horse	MODERN SPECIES	11	C2H8orf74 (ENSECAG00000012975) #7	ENSECAG00000030856 #8	PRSS55 (ENSECAG00000012775) #9	ENSECAG00000012766	ENSECAG00000038501 #11	MSRA (ENSECAG00000001697) #12	KIF13B (ENSECAG00000008773) #13	HMBOX1 (ENSECAG00000008240) #14	INTS9 (ENSECAG00000019848) #15	EXTL3 (ENSECAG00000018661) #16	FZD3 (ENSECAG00000018292) #17	FBXO16 (ENSECAG00000017125) #18	ZNF395 (ENSECAG00000015884) #19	PNOC (ENSECAG00000015761) #20	ELP3 (ENSECAG00000014859) #21	NUGGC (ENSECAG00000014074) #22	SCARA5 (ENSECAG00000013893) #23	PBK (ENSECAG00000013223) #24	ESCO2 (ENSECAG00000012899) #25	CCDC25 (ENSECAG00000011924) #26	SCARA3 (ENSECAG00000011350) #27	CLU (ENSECAG00000007010) #28	GULO (ENSECAG00000003068) #29	EPHX2 (ENSECAG00000023444) #31	CHRNA2 (ENSECAG00000022609) #33	PTK2B (ENSECAG00000018924) #34	TRIM35 (ENSECAG00000018548) #35	STMN4 (ENSECAG00000044039) #37	ADRA1A (ENSECAG00000015917)	DPYSL2 (ENSECAG00000008662)	PNMA2 (ENSECAG00000008517)
Chiroptera	ANCESTRAL SPECIES	61	ENSGT00940000161092	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37
Microchiroptera	ANCESTRAL SPECIES	52	ENSGT00940000161092	ENSGT00940000154323.b #7	ENSGT00940000154242.a #8	ENSGT00940000156020.b.a #9	ENSGT00940000154999.B.k #11	ENSGT00390000003823 #12	ENSGT00940000155500 #13	ENSGT00940000154928.c.a #14	ENSGT00390000001445 #15	ENSGT00940000156692 #16	ENSGT00940000156491.a #17	ENSGT00940000159021 #18	ENSGT00940000157136 #19	ENSGT00950000183149.C #20	ENSGT00390000013141 #21	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37
Greater horseshoe bat	MODERN SPECIES	9	SOX7 (ENSRFEG00010016358)	C8orf74 (ENSRFEG00010016274) #7	ENSRFEG00010015733 #11	MSRA (ENSRFEG00010015483) #12	ENSRFEG00010015448	ENSRFEG00010015406	KIF13B (ENSRFEG00010015351) #13	HMBOX1 (ENSRFEG00010015241) #14	INTS9 (ENSRFEG00010015122) #15	EXTL3 (ENSRFEG00010015082) #16	FZD3 (ENSRFEG00010015031) #17	ENSRFEG00010014701 #18	ZNF395 (ENSRFEG00010014637) #19	PNOC (ENSRFEG00010014558) #20	ELP3 (ENSRFEG00010014240) #21	NUGGC (ENSRFEG00010014148) #22	SCARA5 (ENSRFEG00010014042) #23	ENSRFEG00010013982	PBK (ENSRFEG00010013905) #24	ESCO2 (ENSRFEG00010013852) #25	CCDC25 (ENSRFEG00010013725) #26	SCARA3 (ENSRFEG00010013596) #27	CLU (ENSRFEG00010013527) #28	ENSRFEG00010013238 #31	CHRNA2 (ENSRFEG00010013124) #33	PTK2B (ENSRFEG00010012994) #34	RAPGEF2 (ENSRFEG00010011724)	C4orf45 (ENSRFEG00010011590)	FNIP2 (ENSRFEG00010011548)	ENSRFEG00010011368	ETFDH (ENSRFEG00010011182)
Atlantogenata	ANCESTRAL SPECIES																	ENSGT00390000007091 #22
Xenarthra	ANCESTRAL SPECIES																	ENSGT00390000007091 #22
Armadillo	MODERN SPECIES	1639																ENSDNOG00000030852 #22	ENSDNOG00000041876	ENSDNOG00000044813	ENSDNOG00000044249	PDIA6 (ENSDNOG00000004109)	ATP6V1C2 (ENSDNOG00000004101)	NOL10 (ENSDNOG00000003577)	ENSDNOG00000018474	HPCAL1 (ENSDNOG00000040038)
Afrotheria	ANCESTRAL SPECIES																	ENSGT00390000007091 #22
Afrotheria_a	ANCESTRAL SPECIES																	ENSGT00390000007091 #22
Hyrax	MODERN SPECIES	6697																NUGGC (ENSPCAG00000014520) #22
Marsupialia	ANCESTRAL SPECIES	15	ENSGT01030000234539.b.b.a	ENSGT00950000183087.B.v.a	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00940000161587	ENSGT00390000011010.b	ENSGT00530000064017.b	ENSGT00940000159885	ENSGT00940000160547	ENSGT00940000161920	ENSGT00940000161102	ENSGT00940000156317	ENSGT00940000155596	ENSGT00940000161318	ENSGT00390000007636	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614 #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00950000183021.b	ENSGT00500000044959	ENSGT00390000016702
Marsupialia_b	ANCESTRAL SPECIES	9	ENSGT01030000234539.b.b.a	ENSGT00950000183087.B.v.a	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00940000161587	ENSGT00390000011010.b	ENSGT00530000064017.b	ENSGT00940000159885	ENSGT00940000160547	ENSGT00940000161920	ENSGT00940000161102	ENSGT00940000156317	ENSGT00940000155596	ENSGT00940000161318	ENSGT00390000007636	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614.e #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00950000183021.b	ENSGT00500000044959	ENSGT00390000016702
Diprotodontia	ANCESTRAL SPECIES	2	ENSGT01030000234539.b.b.a	ENSGT00950000183087.B.v.a	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00940000161587	ENSGT00390000011010.b	ENSGT00530000064017.b	ENSGT00940000159885	ENSGT00940000160547	ENSGT00940000161920	ENSGT00940000161102	ENSGT00940000156317	ENSGT00940000155596	ENSGT00940000161318.s	ENSGT00390000007636	ENSGT00390000007091 #22	ENSGT00940000164057	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614.e #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00950000183021.b	ENSGT00500000044959
Diprotodontia_a	ANCESTRAL SPECIES	2	ENSGT01030000234539.b.b.a	ENSGT00950000183087.B.v.a	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00940000161587	ENSGT00390000011010.b.a	ENSGT00530000064017.b	ENSGT00940000159885	ENSGT00940000160547	ENSGT00940000161920	ENSGT00940000161102	ENSGT00940000156317	ENSGT00940000155596	ENSGT00940000161318.s	ENSGT00390000007636	ENSGT00390000007091 #22	ENSGT00940000164057	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00510000049722 #29	ENSGT00940000158614.e #31	ENSGT00940000158299 #33	ENSGT00940000157269.a.a #34	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00950000183021.b	ENSGT00500000044959
Common wonbat	MODERN SPECIES	35	ZMIZ2 (ENSVURG00010003581)	ENSVURG00010003702	H2AZ2 (ENSVURG00010003716)	PURB (ENSVURG00010003726)	ACTR1B (ENSVURG00010003742)	ENSVURG00010003754	ENSVURG00010003765	SEMA4C (ENSVURG00010003786)	ANKRD39 (ENSVURG00010003806)	ANKRD23 (ENSVURG00010003814)	ENSVURG00010003875	CNNM4 (ENSVURG00010003879)	LMAN2L (ENSVURG00010003890)	ENSVURG00010003915	KANSL3 (ENSVURG00010003969)	NUGGC (ENSVURG00010004038) #22	PBK (ENSVURG00010004136) #24	ESCO2 (ENSVURG00010004147) #25	CCDC25 (ENSVURG00010004173) #26	SCARA3 (ENSVURG00010004200) #27	CLU (ENSVURG00010004214) #28	ENSVURG00010004227 #29	EPHX2 (ENSVURG00010004257) #31	ENSVURG00010004303 #34
Tasmanian devil	MODERN SPECIES	1	DDX56 (ENSSHAG00000016615)	OGDH (ENSSHAG00000016718)	ZMIZ2 (ENSSHAG00000016952)	ENSSHAG00000017062	ENSSHAG00000017127	ENSSHAG00000017342	ENSSHAG00000022425	ENSSHAG00000022480	SEMA4C (ENSSHAG00000017454)	ANKRD23 (ENSSHAG00000028247)	CNNM3 (ENSSHAG00000017697)	CNNM4 (ENSSHAG00000021307)	LMAN2L (ENSSHAG00000017859)	ENSSHAG00000017894	ENSSHAG00000017986	ENSSHAG00000018088 #22	SCARA5 (ENSSHAG00000018224) #23	PBK (ENSSHAG00000018381) #24	ESCO2 (ENSSHAG00000018411) #25	CCDC25 (ENSSHAG00000018434) #26	SCARA3 (ENSSHAG00000018558) #27	CLU (ENSSHAG00000028360) #28	ENSSHAG00000006234 #29	ENSSHAG00000022526 #31	ENSSHAG00000002604 #31	CHRNA2 (ENSSHAG00000020533) #33	PTK2B (ENSSHAG00000029715) #34	ENSSHAG00000023575 #35	ENSSHAG00000007155 #37	ENSSHAG00000003234	PTRHD1 (ENSSHAG00000005774)
Opossum	MODERN SPECIES		ZMIZ2 (ENSMODG00000016099)	ENSMODG00000016089	H2AZ2 (ENSMODG00000038487)	PURB (ENSMODG00000016071)	ACTR1B (ENSMODG00000016067)	COX5B (ENSMODG00000016060)	ENSMODG00000016031	SEMA4C (ENSMODG00000023231)	ANKRD39 (ENSMODG00000041663)	ANKRD23 (ENSMODG00000016047)	CNNM3 (ENSMODG00000016039)	CNNM4 (ENSMODG00000016026)	LMAN2L (ENSMODG00000016022)	ENSMODG00000016016	KANSL3 (ENSMODG00000015996)	NUGGC (ENSMODG00000015992) #22	SCARA5 (ENSMODG00000015990) #23	CCDC25 (ENSMODG00000015976) #26	ENSMODG00000015984	ENSMODG00000037017	SCARA3 (ENSMODG00000015965) #27	ENSMODG00000015960 #28	ENSMODG00000015957 #29	ENSMODG00000049961	EPHX2 (ENSMODG00000015948) #31	ENSMODG00000015951	CHRNA2 (ENSMODG00000015940) #33	PTK2B (ENSMODG00000015932) #34	TRIM35 (ENSMODG00000015914) #35	STMN4 (ENSMODG00000015911) #37	NCOA1 (ENSMODG00000015907)
Platypus	MODERN SPECIES	20	ENSOANG00000037767	FAM166C (ENSOANG00000000519)	OTOF (ENSOANG00000000520)	DRC1 (ENSOANG00000000522)	SELENOI (ENSOANG00000000523)	ADGRF3 (ENSOANG00000015827)	HADHB (ENSOANG00000015828)	HADHA (ENSOANG00000015830)	GAREM2 (ENSOANG00000015831)	RAB10 (ENSOANG00000015832)	KIF3C (ENSOANG00000015833)	ASXL2 (ENSOANG00000015834)	ENSOANG00000015835	DNMT3A (ENSOANG00000015836)	ENSOANG00000022083	NUGGC (ENSOANG00000015837) #22	SCARA5 (ENSOANG00000015838) #23	PBK (ENSOANG00000015839) #24	ENSOANG00000015840 #25	CCDC25 (ENSOANG00000000791) #26	SCARA3 (ENSOANG00000001256) #27	ENSOANG00000001254 #28	POLR3F (ENSOANG00000001253)	ENSOANG00000001252	KAT14 (ENSOANG00000001251)	PET117 (ENSOANG00000049166)	OVOL2 (ENSOANG00000001250)	MGME1 (ENSOANG00000038109)	SNX5 (ENSOANG00000040202)	ENSOANG00000037227	ENSOANG00000001247
Sauria	ANCESTRAL SPECIES	1	ENSGT00940000157136 #19	ENSGT00950000183021.b	ENSGT00500000044959	ENSGT00390000016702	ENSGT00940000156549.a.a	ENSGT00940000157133	ENSGT00390000002143.b	ENSGT00390000016811	ENSGT00940000164041	ENSGT01030000234597.a.b.a #37	ENSGT00940000160868 #35	ENSGT00940000157269.a.a #34	ENSGT00940000158299 #33	ENSGT00940000158614 #31	ENSGT00510000049722 #29	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00950000185082	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00390000017237	ENSGT00940000158248.b	ENSGT00940000161840	ENSGT00390000018634	ENSGT00940000155086.C	ENSGT00940000153804.A	ENSGT00390000008161.b	ENSGT00940000161541
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000157136 #19	ENSGT00950000183021.b	ENSGT00500000044959	ENSGT00390000016702	ENSGT00940000156549.a.a	ENSGT00940000157133	ENSGT00390000002143.b	ENSGT00390000016811	ENSGT00940000164041	ENSGT01030000234597.a.b.a #37	ENSGT00940000160868 #35	ENSGT00940000157269.a.a #34	ENSGT00940000158299 #33	ENSGT00940000158614 #31	ENSGT00510000049722 #29	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00950000185082	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00390000017237	ENSGT00940000158248.b	ENSGT00940000161840	ENSGT00390000018634	ENSGT00940000155086.C	ENSGT00940000153804.A	ENSGT00390000008161.b	ENSGT00940000161541
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000157136 #19	ENSGT00950000183021.b	ENSGT00500000044959	ENSGT00390000016702	ENSGT00940000156549.a.a	ENSGT00940000157133	ENSGT00390000002143.b	ENSGT00390000016811	ENSGT00940000164041	ENSGT01030000234597.a.b.a #37	ENSGT00940000160868 #35	ENSGT00940000157269.a.a #34	ENSGT00940000158299 #33	ENSGT00940000158614 #31	ENSGT00510000049722 #29	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00950000185082	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00390000017237	ENSGT00940000158248.b	ENSGT00940000161840	ENSGT00390000018634	ENSGT00940000155086.C	ENSGT00940000153804.A	ENSGT00390000008161.b	ENSGT01030000234626.A.b
Aves	ANCESTRAL SPECIES	38	ENSGT00940000157136 #19	ENSGT00950000183021.b	ENSGT00500000044959	ENSGT00390000016702	ENSGT00940000156549.a.a	ENSGT00940000157133	ENSGT00390000002143.b	ENSGT00390000016811	ENSGT00940000164041	ENSGT01030000234597.a.b.a #37	ENSGT00940000160868 #35	ENSGT00940000157269.a.a #34	ENSGT00940000158299 #33	ENSGT00940000158614 #31	ENSGT00510000049722 #29	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00950000185082	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT00530000063668.B #28	ENSGT00390000017237	ENSGT00940000158248.b	ENSGT00390000018634	ENSGT00940000155086.C	ENSGT00940000153804.A	ENSGT00940000154393.h	ENSGT00940000154393.g.a	ENSGT01030000234626.A.b
Neognathae	ANCESTRAL SPECIES	2	ENSGT00950000183021.b	ENSGT00500000044959	ENSGT00390000016702	ENSGT00940000156549.a.a	ENSGT00940000157133	ENSGT00390000002143.b	ENSGT00390000016811	ENSGT00940000164041	ENSGT01030000234597.a.b.a #37	ENSGT00940000160868 #35	ENSGT00940000157269.a.a.c.a #34	ENSGT00940000157269.a.a.d #34	ENSGT00940000158299 #33	ENSGT00940000158614 #31	ENSGT00510000049722 #29	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00950000185082	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT01100000263560.b	ENSGT00530000063668.B #28	ENSGT00390000017237	ENSGT00940000158248.b	ENSGT00390000018634	ENSGT00940000155086.C	ENSGT00940000153804.A	ENSGT00940000154393.h	ENSGT00940000154393.g.a
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00940000164272	ENSGT00520000055578.a.b	ENSGT00940000153739.a.b	ENSGT00940000177261	ENSGT00940000156975.u	ENSGT00530000063834.e.b	ENSGT00940000154677	ENSGT01030000234626.A.b	ENSGT00390000008161.b	ENSGT00940000157269.a.a.d #34	ENSGT00940000158299 #33	ENSGT00940000158614 #31	ENSGT00510000049722 #29	ENSGT00940000164057.a	ENSGT00940000164057.b	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT01100000263560.b.b	ENSGT00530000063668.B #28	ENSGT00390000017237	ENSGT00940000158248.b	ENSGT00390000018634	ENSGT00940000155086.C	ENSGT00940000153804.A	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000164041
Phasianidae	ANCESTRAL SPECIES	28	ENSGT00940000164272	ENSGT00520000055578.a.b	ENSGT00940000153739.a.b	ENSGT00940000177261	ENSGT00940000156975.u	ENSGT00530000063834.e.b	ENSGT00940000154677	ENSGT01030000234626.A.b	ENSGT00940000154393.g.a	ENSGT00940000157269.a.a.d #34	ENSGT00940000158299 #33	ENSGT00940000158614 #31	ENSGT00510000049722 #29	ENSGT00940000164057.a	ENSGT00940000164057.b	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT01100000263560.b.b	ENSGT00530000063668.B #28	ENSGT00390000017237	ENSGT00940000158248.b	ENSGT00390000018634	ENSGT00940000155086.C	ENSGT00940000153804.A	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000164041
Phasianidae_b	ANCESTRAL SPECIES	29	ENSGT00940000164272	ENSGT00520000055578.a.b	ENSGT00940000153739.a.b	ENSGT00940000177261	ENSGT00940000156975.u	ENSGT00530000063834.e.b	ENSGT00940000154677	ENSGT01030000234626.A.b	ENSGT00940000154393.g.a	ENSGT00940000157269.a.a.d #34	ENSGT00940000158299 #33	ENSGT00940000158614 #31	ENSGT00510000049722 #29	ENSGT00940000164057.a	ENSGT00940000164057.b	ENSGT00390000007091 #22	ENSGT00950000183074.B.a.a #23	ENSGT00720000108839 #24	ENSGT00940000158598 #25	ENSGT00390000004380 #26	ENSGT00940000158238 #27	ENSGT01100000263560.b.b	ENSGT00530000063668.B #28	ENSGT00390000017237	ENSGT00940000158248.b	ENSGT00390000018634	ENSGT00940000155086.C	ENSGT00940000153804.A	ENSGT00940000160868 #35	ENSGT01030000234597.a.b.a #37	ENSGT00940000164041
Turkey	MODERN SPECIES	11	DNMT3A (ENSMGAG00000014078)	ENSMGAG00000014080	ASXL2 (ENSMGAG00000014086)	ENSMGAG00000019139	RAB10 (ENSMGAG00000014088)	GAREM2 (ENSMGAG00000022446)	HADHA (ENSMGAG00000014090)	HADHB (ENSMGAG00000014094)	ENSMGAG00000015651	ENSMGAG00000022025	SELENOI (ENSMGAG00000014102)	PTK2B (ENSMGAG00000014100) #34	ENSMGAG00000014105 #33	EPHX2 (ENSMGAG00000014107) #31	ENSMGAG00000014114 #29	NUGGC (ENSMGAG00000020967) #22	SCARA5 (ENSMGAG00000014119) #23	PBK (ENSMGAG00000014121) #24	ESCO2 (ENSMGAG00000014122) #25	CCDC25 (ENSMGAG00000014123) #26	SCARA3 (ENSMGAG00000014125) #27	ENSMGAG00000022703	CLU (ENSMGAG00000014126) #28	SLC35F6 (ENSMGAG00000014128)	KCNK3 (ENSMGAG00000017098)	FAM166C (ENSMGAG00000020358)	OTOF (ENSMGAG00000014133)	ENSMGAG00000014136	ENSMGAG00000014139 #35	ENSMGAG00000017031 #37	ENSMGAG00000014141