Mus	ANCESTRAL SPECIES	15	ENSGT00940000156340.a #7	ENSGT00940000161345 #8	ENSGT00390000015147 #9	ENSGT00940000161808 #10	ENSGT00940000163531 #11	ENSGT00940000161054 #12	ENSGT00940000160846.d #13	ENSGT00940000160846.c #14	ENSGT00940000160683 #15	ENSGT00940000161997.a #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00730000110871.a.a.a.b #18	ENSGT00960000191699 #19	ENSGT00390000011514 #20	ENSGT00950000183170.b.b #21	ENSGT00940000156322 #22	ENSGT00390000011570 #23	ENSGT00520000055666.b #24	ENSGT00390000005581.a #25	ENSGT00940000155682 #26	ENSGT00940000162889 #27	ENSGT00940000162185 #28	ENSGT00950000183022.b #29	ENSGT00940000158212.B #30	ENSGT00390000007989 #31	ENSGT00940000155992 #32	ENSGT00390000015709 #33	ENSGT01090000259987.a.a.a.c #34	ENSGT00390000004977 #35	ENSGT00950000182895.a.b.j #36	ENSGT00940000158193 #37
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000156340.a #7	ENSGT00940000161345 #8	ENSGT00390000015147 #9	ENSGT00940000161808 #10	ENSGT00940000163531 #11	ENSGT00940000161054 #12	ENSGT00940000160846.d #13	ENSGT00940000160846.c #14	ENSGT00940000160683 #15	ENSGT00940000161997.a #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00730000110871.a.a.a.b #18	ENSGT00960000191699 #19	ENSGT00390000011514 #20	ENSGT00950000183170.b.b #21	ENSGT00940000156322 #22	ENSGT00390000011570 #23	ENSGT00520000055666.b #24	ENSGT00390000005581.a #25	ENSGT00940000155682 #26	ENSGT00940000162889 #27	ENSGT00940000162185 #28	ENSGT00900000143399	ENSGT00950000183022.b #29	ENSGT00940000158212.B #30	ENSGT00390000007989 #31	ENSGT00940000155992 #32	ENSGT00390000015709 #33	ENSGT01090000259987.a.a.a.c #34	ENSGT00390000004977 #35	ENSGT00950000182895.a.b.j #36
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000156340.a #7	ENSGT00940000161345 #8	ENSGT00390000015147 #9	ENSGT00940000161808 #10	ENSGT00940000163531 #11	ENSGT00940000161054 #12	ENSGT00940000160846.d #13	ENSGT00940000160846.c #14	ENSGT00940000160683 #15	ENSGT00940000161997.a #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00730000110871.a.a.a.b #18	ENSGT00960000191699 #19	ENSGT00390000011514 #20	ENSGT00950000183170.b.b #21	ENSGT00940000156322 #22	ENSGT00390000011570 #23	ENSGT00520000055666.b #24	ENSGT00390000005581.a #25	ENSGT00940000155682 #26	ENSGT00940000162889 #27	ENSGT00940000162185 #28	ENSGT00900000143399	ENSGT00950000183022.b #29	ENSGT00940000158212.B #30	ENSGT00390000007989 #31	ENSGT00940000155992 #32	ENSGT00390000015709 #33	ENSGT01090000259987.a.a.a.c #34	ENSGT00390000004977 #35	ENSGT00950000182895.a.b.j #36
Mouse	MODERN SPECIES	1	Mmp11 (ENSMUSG00000000901) #7	Chchd10 (ENSMUSG00000049422) #8	Gm867 (ENSMUSG00000050157) #9	Vpreb3 (ENSMUSG00000000903) #10	Gm5134 (ENSMUSG00000033255) #11	Zfp280b (ENSMUSG00000049764) #12	Slc5a4b (ENSMUSG00000020226) #13	Slc5a4a (ENSMUSG00000020229) #14	Prmt2 (ENSMUSG00000020230) #15	S100b (ENSMUSG00000033208) #16	Dip2a (ENSMUSG00000020231) #17	Pcnt (ENSMUSG00000001151) #18	Gm56118 (ENSMUSG00000117965) #19	2610028H24Rik (ENSMUSG00000009114) #20	Ybey (ENSMUSG00000033126) #21	Mcm3ap (ENSMUSG00000001150) #22	Lss (ENSMUSG00000033105) #23	Spatc1l (ENSMUSG00000009115) #24	Ftcd (ENSMUSG00000001155) #25	Col6a2 (ENSMUSG00000020241) #26	Col6a1 (ENSMUSG00000001119) #27	Pcbp3 (ENSMUSG00000001120) #28	Slc19a1 (ENSMUSG00000001436) #29	Col18a1 (ENSMUSG00000001435) #30	Pofut2 (ENSMUSG00000020260) #31	Adarb1 (ENSMUSG00000020262) #32	Fam207a (ENSMUSG00000032977) #33	Itgb2 (ENSMUSG00000000290) #34	Pttg1ip (ENSMUSG00000009291) #35	Sumo3 (ENSMUSG00000020265) #36	Ube2g2 (ENSMUSG00000009293) #37
Mus_C	ANCESTRAL SPECIES	7	ENSGT00530000063156.a.a.b	ENSGT00440000038585	ENSGT00940000156340.a #7	ENSGT00940000161345 #8	ENSGT00940000161808 #10	ENSGT00940000163531 #11	ENSGT00940000161054 #12	ENSGT00940000160846.d #13	ENSGT00940000160846.c #14	ENSGT00940000160683 #15	ENSGT00940000161997.a #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00730000110871.a.a.a.b #18	ENSGT00390000011514 #20	ENSGT00950000183170.b.b #21	ENSGT00940000156322 #22	ENSGT00390000011570 #23	ENSGT00520000055666.b #24	ENSGT00390000005581.a #25	ENSGT00940000155682 #26	ENSGT00940000162889 #27	ENSGT00940000162185 #28	ENSGT00900000143399	ENSGT00950000183022.b #29	ENSGT00940000158212.B #30	ENSGT00390000007989 #31	ENSGT00940000155992 #32	ENSGT00390000015709 #33	ENSGT01090000259987.a.a.a.c #34	ENSGT00390000004977 #35	ENSGT00950000182895.a.b.j #36
Steppe mouse	MODERN SPECIES	2997	ENSMSIG00000005270	Derl3 (ENSMSIG00000005221)	Smarcb1 (ENSMSIG00000005155)	Mmp11 (ENSMSIG00000005065) #7	Vpreb3 (ENSMSIG00000005055) #10	Gm5134 (ENSMSIG00000004960) #11	ENSMSIG00000004952	Slc5a4b (ENSMSIG00000004902) #13	Slc5a4a (ENSMSIG00000004850) #14	Prmt2 (ENSMSIG00000004778) #15	S100b (ENSMSIG00000004765) #16	Dip2a (ENSMSIG00000004099) #17	Pcnt (ENSMSIG00000003573) #18	2610028H24Rik (ENSMSIG00000003499) #20	ENSMSIG00000003478 #21	Mcm3ap (ENSMSIG00000003384) #22	Lss (ENSMSIG00000003250) #23	ENSMSIG00000003212 #24
spretus	MODERN SPECIES	1	Derl3 (MGP_SPRETEiJ_G0016267)	Smarcb1 (MGP_SPRETEiJ_G0016268)	Mmp11 (MGP_SPRETEiJ_G0016269) #7	Chchd10 (MGP_SPRETEiJ_G0016270) #8	Vpreb3 (MGP_SPRETEiJ_G0016271) #10	Gm5134 (MGP_SPRETEiJ_G0016272) #11	Zfp280b (MGP_SPRETEiJ_G0016273) #12	Slc5a4b (MGP_SPRETEiJ_G0016274) #13	Slc5a4a (MGP_SPRETEiJ_G0016275) #14	Prmt2 (MGP_SPRETEiJ_G0016276) #15	S100b (MGP_SPRETEiJ_G0016277) #16	MGP_SPRETEiJ_G0016278 #17	Pcnt (MGP_SPRETEiJ_G0016279) #18	2610028H24Rik (MGP_SPRETEiJ_G0016280) #20	Ybey (MGP_SPRETEiJ_G0016281) #21	Mcm3ap (MGP_SPRETEiJ_G0016282) #22	Lss (MGP_SPRETEiJ_G0016283) #23	Spatc1l (MGP_SPRETEiJ_G0016284) #24	Ftcd (MGP_SPRETEiJ_G0016285) #25	Col6a2 (MGP_SPRETEiJ_G0016286) #26	Col6a1 (MGP_SPRETEiJ_G0016287) #27	Pcbp3 (MGP_SPRETEiJ_G0016288) #28	MGP_SPRETEiJ_G0016289	Slc19a1 (MGP_SPRETEiJ_G0016290) #29	Col18a1 (MGP_SPRETEiJ_G0016291) #30	MGP_SPRETEiJ_G0016292	Pofut2 (MGP_SPRETEiJ_G0016293) #31	Adarb1 (MGP_SPRETEiJ_G0016294) #32	Fam207a (MGP_SPRETEiJ_G0016295) #33	Itgb2 (MGP_SPRETEiJ_G0016296) #34	Pttg1ip (MGP_SPRETEiJ_G0016297) #35
Ryukyu mouse	MODERN SPECIES	1	Derl3 (MGP_CAROLIEiJ_G0015454)	Smarcb1 (MGP_CAROLIEiJ_G0015455)	Mmp11 (MGP_CAROLIEiJ_G0015456) #7	Chchd10 (MGP_CAROLIEiJ_G0015457) #8	Vpreb3 (MGP_CAROLIEiJ_G0015458) #10	Gm5134 (MGP_CAROLIEiJ_G0015459) #11	Zfp280b (MGP_CAROLIEiJ_G0015460) #12	Slc5a4b (MGP_CAROLIEiJ_G0015461) #13	Slc5a4a (MGP_CAROLIEiJ_G0015462) #14	Prmt2 (MGP_CAROLIEiJ_G0015463) #15	S100b (MGP_CAROLIEiJ_G0015464) #16	Dip2a (MGP_CAROLIEiJ_G0015465) #17	Pcnt (MGP_CAROLIEiJ_G0015466) #18	2610028H24Rik (MGP_CAROLIEiJ_G0015467) #20	Ybey (MGP_CAROLIEiJ_G0015468) #21	Mcm3ap (MGP_CAROLIEiJ_G0015469) #22	Lss (MGP_CAROLIEiJ_G0015470) #23	Spatc1l (MGP_CAROLIEiJ_G0015471) #24	Ftcd (MGP_CAROLIEiJ_G0015472) #25	Col6a2 (MGP_CAROLIEiJ_G0015473) #26	Col6a1 (MGP_CAROLIEiJ_G0015474) #27	Pcbp3 (MGP_CAROLIEiJ_G0015475) #28	MGP_CAROLIEiJ_G0015476	Slc19a1 (MGP_CAROLIEiJ_G0015477) #29	Col18a1 (MGP_CAROLIEiJ_G0015478) #30	MGP_CAROLIEiJ_G0015479	Pofut2 (MGP_CAROLIEiJ_G0015480) #31	Adarb1 (MGP_CAROLIEiJ_G0015481) #32	Fam207a (MGP_CAROLIEiJ_G0015482) #33	Itgb2 (MGP_CAROLIEiJ_G0015483) #34	Pttg1ip (MGP_CAROLIEiJ_G0015484) #35
Shrew mouse	MODERN SPECIES	22	Gstt2 (MGP_PahariEiJ_G0030868)	Mif (MGP_PahariEiJ_G0030869)	Derl3 (MGP_PahariEiJ_G0030870)	Smarcb1 (MGP_PahariEiJ_G0030871)	Mmp11 (MGP_PahariEiJ_G0030872) #7	Chchd10 (MGP_PahariEiJ_G0030873) #8	MGP_PahariEiJ_G0030874 #10	Gm5134 (MGP_PahariEiJ_G0030875) #11	Slc5a4a (MGP_PahariEiJ_G0030876) #14	Prmt2 (MGP_PahariEiJ_G0030877) #15	S100b (MGP_PahariEiJ_G0030878) #16	Dip2a (MGP_PahariEiJ_G0030879) #17	Pcnt (MGP_PahariEiJ_G0030880) #18	2610028H24Rik (MGP_PahariEiJ_G0030881) #20	Ybey (MGP_PahariEiJ_G0030882) #21	Mcm3ap (MGP_PahariEiJ_G0030883) #22	Lss (MGP_PahariEiJ_G0030884) #23	Spatc1l (MGP_PahariEiJ_G0030885) #24	Ftcd (MGP_PahariEiJ_G0030886) #25	Col6a2 (MGP_PahariEiJ_G0030887) #26	Col6a1 (MGP_PahariEiJ_G0030888) #27	Pcbp3 (MGP_PahariEiJ_G0030889) #28	MGP_PahariEiJ_G0030890	Slc19a1 (MGP_PahariEiJ_G0030891) #29	Col18a1 (MGP_PahariEiJ_G0030892) #30	Pofut2 (MGP_PahariEiJ_G0030893) #31	Adarb1 (MGP_PahariEiJ_G0030894) #32	Fam207a (MGP_PahariEiJ_G0030895) #33	Itgb2 (MGP_PahariEiJ_G0030896) #34	Pttg1ip (MGP_PahariEiJ_G0030897) #35	Sumo3 (MGP_PahariEiJ_G0030898) #36