Tetrapoda	ANCESTRAL SPECIES	5	ENSGT00390000006546 #7	ENSGT00660000096975	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000166459.A	ENSGT00940000165853	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b
Amniota	ANCESTRAL SPECIES	5	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000166459.A	ENSGT00940000165853	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878
Mammalia	ANCESTRAL SPECIES	8	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Theria	ANCESTRAL SPECIES	2	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Glires	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	494	Ccdc59 (ENSNGAG00000023637) #7	ENSNGAG00000012599 #8	Ppfia2 (ENSNGAG00000022807) #9	Acss3 (ENSNGAG00000015078) #10	Lin7a (ENSNGAG00000022827) #11	Myf5 (ENSNGAG00000003539) #12	Myf6 (ENSNGAG00000023390) #13	Ptprq (ENSNGAG00000024172) #14	Otogl (ENSNGAG00000022483) #15	ENSNGAG00000024231 #16	Ppp1r12a (ENSNGAG00000023300) #17	Pawr (ENSNGAG00000015922) #18	Syt1 (ENSNGAG00000020988) #19	Nav3 (ENSNGAG00000024210) #20	ENSNGAG00000024182 #21	E2f7 (ENSNGAG00000023644) #22	ENSNGAG00000023257 #23	Zdhhc17 (ENSNGAG00000009049) #24	Osbpl8 (ENSNGAG00000014231) #25	Bbs10 (ENSNGAG00000022298) #26	ENSNGAG00000014133 #27	ENSNGAG00000022884 #28
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00940000167051	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Chinese hamster chok1gshd	MODERN SPECIES	83	Ppfia2 (ENSCGRG00001020914) #9	Acss3 (ENSCGRG00001009906) #10	Lin7a (ENSCGRG00001003313) #11	Myf5 (ENSCGRG00001009370) #12	Myf6 (ENSCGRG00001006341) #13	Ptprq (ENSCGRG00001017128) #14	Otogl (ENSCGRG00001018530) #15	Ppp1r12a (ENSCGRG00001017263) #17	Pawr (ENSCGRG00001011044) #18	ENSCGRG00001009057	ENSCGRG00001010398	Syt1 (ENSCGRG00001000069) #19	Brcc3dc (ENSCGRG00001009076)	Nav3 (ENSCGRG00001022037) #20	ENSCGRG00001011762	E2f7 (ENSCGRG00001006568) #22	Csrp2 (ENSCGRG00001000844) #23	Zdhhc17 (ENSCGRG00001007660) #24	Osbpl8 (ENSCGRG00001021286) #25	Bbs10 (ENSCGRG00001010466) #26	ENSCGRG00001019257	Phlda1 (ENSCGRG00001012896)	ENSCGRG00001005440	Krr1 (ENSCGRG00001005995)	Glipr1 (ENSCGRG00001017559)	ENSCGRG00001014628	Caps2 (ENSCGRG00001012612)	Kcnc2 (ENSCGRG00001023381)	Atxn7l3b (ENSCGRG00001001803)	Trhde (ENSCGRG00001020946)	Tph2 (ENSCGRG00001012899)
Golden Hamster	MODERN SPECIES	628	Mettl25 (ENSMAUG00000020950)	Ccdc59 (ENSMAUG00000017516) #7	Ppfia2 (ENSMAUG00000021622) #9	ENSMAUG00000019031	Acss3 (ENSMAUG00000014131) #10	Lin7a (ENSMAUG00000007088) #11	Myf5 (ENSMAUG00000000933) #12	Myf6 (ENSMAUG00000019329) #13	Ptprq (ENSMAUG00000014282) #14	Otogl (ENSMAUG00000009930) #15	Ppp1r12a (ENSMAUG00000021712) #17	ENSMAUG00000008984	Syt1 (ENSMAUG00000012263) #19	ENSMAUG00000014224	Nav3 (ENSMAUG00000012505) #20	E2f7 (ENSMAUG00000010792) #22	Csrp2 (ENSMAUG00000018727) #23	Zdhhc17 (ENSMAUG00000021687) #24	Osbpl8 (ENSMAUG00000022092) #25	Bbs10 (ENSMAUG00000018240) #26	Nap1l1 (ENSMAUG00000016700)	ENSMAUG00000021584	Krr1 (ENSMAUG00000021283)	Glipr1l2 (ENSMAUG00000017252)	ENSMAUG00000022161	Caps2 (ENSMAUG00000009850)	Kcnc2 (ENSMAUG00000010585)
Cricetidae_B	ANCESTRAL SPECIES	29	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Prairie vole	MODERN SPECIES	10	Tmtc2 (ENSMOCG00000012479)	Mettl25 (ENSMOCG00000018000)	Ccdc59 (ENSMOCG00000006690) #7	Ppfia2 (ENSMOCG00000007873) #9	Acss3 (ENSMOCG00000012086) #10	Lin7a (ENSMOCG00000021369) #11	Myf5 (ENSMOCG00000017847) #12	Myf6 (ENSMOCG00000015833) #13	Ptprq (ENSMOCG00000017842) #14	Otogl (ENSMOCG00000018409) #15	Ppp1r12a (ENSMOCG00000018418) #17	Pawr (ENSMOCG00000019570) #18	Syt1 (ENSMOCG00000012503) #19	ENSMOCG00000020523	Nav3 (ENSMOCG00000018391) #20	E2f7 (ENSMOCG00000021130) #22	Csrp2 (ENSMOCG00000007217) #23	Zdhhc17 (ENSMOCG00000002407) #24	Osbpl8 (ENSMOCG00000016633) #25	Bbs10 (ENSMOCG00000020010) #26	Nap1l1 (ENSMOCG00000012136)	Phlda1 (ENSMOCG00000021889)	Krr1 (ENSMOCG00000018635)	Glipr1 (ENSMOCG00000022141)	Glipr1l2 (ENSMOCG00000002411)	ENSMOCG00000013587	Caps2 (ENSMOCG00000001012)	Kcnc2 (ENSMOCG00000022707)	Atxn7l3b (ENSMOCG00000007338)	ENSMOCG00000016064	Trhde (ENSMOCG00000000440)
Northern American deer mouse	MODERN SPECIES	9	Tmtc2 (ENSPEMG00000020725)	Mettl25 (ENSPEMG00000013112)	Ccdc59 (ENSPEMG00000031144) #7	Ppfia2 (ENSPEMG00000015993) #9	Acss3 (ENSPEMG00000017696) #10	Lin7a (ENSPEMG00000018576) #11	Myf5 (ENSPEMG00000018818) #12	Myf6 (ENSPEMG00000019751) #13	Ptprq (ENSPEMG00000019976) #14	Otogl (ENSPEMG00000005921) #15	Ppp1r12a (ENSPEMG00000011824) #17	Pawr (ENSPEMG00000031267) #18	Syt1 (ENSPEMG00000011853) #19	Brcc3dc (ENSPEMG00000012864)	Nav3 (ENSPEMG00000003783) #20	E2f7 (ENSPEMG00000013555) #22	Csrp2 (ENSPEMG00000012653) #23	Zdhhc17 (ENSPEMG00000011257) #24	Osbpl8 (ENSPEMG00000008934) #25	Bbs10 (ENSPEMG00000031116) #26	Nap1l1 (ENSPEMG00000000646)	Phlda1 (ENSPEMG00000020277)	Krr1 (ENSPEMG00000020228)	Glipr1 (ENSPEMG00000020190)	ENSPEMG00000020146	ENSPEMG00000020129	ENSPEMG00000030311	Caps2 (ENSPEMG00000020036)	Kcnc2 (ENSPEMG00000014606)	Atxn7l3b (ENSPEMG00000027167)	Trhde (ENSPEMG00000022340)
Murinae	ANCESTRAL SPECIES	22	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Mus	ANCESTRAL SPECIES	23	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00900000143684	ENSGT00940000155878
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162547.i.a	ENSGT00940000162357	ENSGT00940000162547.i.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00900000143684
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162547.i.a	ENSGT00940000162357	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00900000143684	ENSGT00940000155878
Steppe mouse	MODERN SPECIES	2517																E2f7 (ENSMSIG00000004948) #22	Csrp2 (ENSMSIG00000004873) #23	Zdhhc17 (ENSMSIG00000004833) #24
spretus	MODERN SPECIES	1	Slc6a15 (MGP_SPRETEiJ_G0016600)	Tmtc2 (MGP_SPRETEiJ_G0016601)	Mettl25 (MGP_SPRETEiJ_G0016602)	Ccdc59 (MGP_SPRETEiJ_G0016603) #7	Ppfia2 (MGP_SPRETEiJ_G0016604) #9	Acss3 (MGP_SPRETEiJ_G0016605) #10	Lin7a (MGP_SPRETEiJ_G0016606) #11	Myf5 (MGP_SPRETEiJ_G0016607) #12	Myf6 (MGP_SPRETEiJ_G0016608) #13	Ptprq (MGP_SPRETEiJ_G0016609) #14	Otogl (MGP_SPRETEiJ_G0016610) #15	Ppp1r12a (MGP_SPRETEiJ_G0016611) #17	Pawr (MGP_SPRETEiJ_G0016612) #18	Syt1 (MGP_SPRETEiJ_G0016613) #19	Nav3 (MGP_SPRETEiJ_G0016614) #20	E2f7 (MGP_SPRETEiJ_G0016615) #22	Csrp2 (MGP_SPRETEiJ_G0016616) #23	Zdhhc17 (MGP_SPRETEiJ_G0016617) #24	Osbpl8 (MGP_SPRETEiJ_G0016618) #25	Bbs10 (MGP_SPRETEiJ_G0016619) #26	Nap1l1 (MGP_SPRETEiJ_G0016620)	Phlda1 (MGP_SPRETEiJ_G0016621)	Krr1 (MGP_SPRETEiJ_G0016622)	Glipr1 (MGP_SPRETEiJ_G0016623)	MGP_SPRETEiJ_G0016624	MGP_SPRETEiJ_G0016625	MGP_SPRETEiJ_G0016626	Kcnc2 (MGP_SPRETEiJ_G0016627)	Atxn7l3b (MGP_SPRETEiJ_G0016628)	MGP_SPRETEiJ_G0016629	Trhde (MGP_SPRETEiJ_G0016630)
Mouse	MODERN SPECIES	1	Tmtc2 (ENSMUSG00000036019)	Mettl25 (ENSMUSG00000036009)	Ccdc59 (ENSMUSG00000019897) #7	Ppfia2 (ENSMUSG00000053825) #9	Acss3 (ENSMUSG00000035948) #10	Lin7a (ENSMUSG00000019906) #11	Myf5 (ENSMUSG00000000435) #12	Myf6 (ENSMUSG00000035923) #13	Ptprq (ENSMUSG00000035916) #14	Otogl (ENSMUSG00000091455) #15	Ppp1r12a (ENSMUSG00000019907) #17	Pawr (ENSMUSG00000035873) #18	Syt1 (ENSMUSG00000035864) #19	Brcc3dc (ENSMUSG00000112039)	Nav3 (ENSMUSG00000020181) #20	E2f7 (ENSMUSG00000020185) #22	Csrp2 (ENSMUSG00000020186) #23	Zdhhc17 (ENSMUSG00000035798) #24	Osbpl8 (ENSMUSG00000020189) #25	Bbs10 (ENSMUSG00000035759) #26	Nap1l1 (ENSMUSG00000058799)	Phlda1 (ENSMUSG00000020205)	Krr1 (ENSMUSG00000063334)	Glipr1 (ENSMUSG00000056888)	Glipr1l1 (ENSMUSG00000020213)	Glipr1l2 (ENSMUSG00000020214)	Glipr1l3 (ENSMUSG00000112611)	Caps2 (ENSMUSG00000035694)	Kcnc2 (ENSMUSG00000035681)	Atxn7l3b (ENSMUSG00000074748)	Trhde (ENSMUSG00000050663)
Ryukyu mouse	MODERN SPECIES	1	Slc6a15 (MGP_CAROLIEiJ_G0015778)	Tmtc2 (MGP_CAROLIEiJ_G0015779)	Mettl25 (MGP_CAROLIEiJ_G0015780)	Ccdc59 (MGP_CAROLIEiJ_G0015781) #7	Ppfia2 (MGP_CAROLIEiJ_G0015782) #9	Acss3 (MGP_CAROLIEiJ_G0015783) #10	Lin7a (MGP_CAROLIEiJ_G0015784) #11	Myf5 (MGP_CAROLIEiJ_G0015785) #12	Myf6 (MGP_CAROLIEiJ_G0015786) #13	Ptprq (MGP_CAROLIEiJ_G0015787) #14	Otogl (MGP_CAROLIEiJ_G0015788) #15	Ppp1r12a (MGP_CAROLIEiJ_G0015789) #17	MGP_CAROLIEiJ_G0015790 #18	Syt1 (MGP_CAROLIEiJ_G0015791) #19	Nav3 (MGP_CAROLIEiJ_G0015792) #20	E2f7 (MGP_CAROLIEiJ_G0015793) #22	Csrp2 (MGP_CAROLIEiJ_G0015794) #23	Zdhhc17 (MGP_CAROLIEiJ_G0015795) #24	Osbpl8 (MGP_CAROLIEiJ_G0015796) #25	Bbs10 (MGP_CAROLIEiJ_G0015797) #26	Nap1l1 (MGP_CAROLIEiJ_G0015798)	Phlda1 (MGP_CAROLIEiJ_G0015799)	Krr1 (MGP_CAROLIEiJ_G0015800)	Glipr1 (MGP_CAROLIEiJ_G0015801)	Glipr1l2 (MGP_CAROLIEiJ_G0015802)	MGP_CAROLIEiJ_G0015803	Caps2 (MGP_CAROLIEiJ_G0015804)	Kcnc2 (MGP_CAROLIEiJ_G0015805)	Atxn7l3b (MGP_CAROLIEiJ_G0015806)	MGP_CAROLIEiJ_G0015807	Trhde (MGP_CAROLIEiJ_G0015808)
Shrew mouse	MODERN SPECIES	22	Slc6a15 (MGP_PahariEiJ_G0031309)	Tmtc2 (MGP_PahariEiJ_G0031308)	Mettl25 (MGP_PahariEiJ_G0031307)	Ccdc59 (MGP_PahariEiJ_G0031306) #7	Ppfia2 (MGP_PahariEiJ_G0031305) #9	Acss3 (MGP_PahariEiJ_G0031304) #10	Lin7a (MGP_PahariEiJ_G0031303) #11	Myf5 (MGP_PahariEiJ_G0031302) #12	Myf6 (MGP_PahariEiJ_G0031301) #13	Ptprq (MGP_PahariEiJ_G0031300) #14	MGP_PahariEiJ_G0031299 #15	Ppp1r12a (MGP_PahariEiJ_G0031298) #17	Pawr (MGP_PahariEiJ_G0031297) #18	Syt1 (MGP_PahariEiJ_G0031296) #19	MGP_PahariEiJ_G0031295 #20	E2f7 (MGP_PahariEiJ_G0031294) #22	Csrp2 (MGP_PahariEiJ_G0031293) #23	Zdhhc17 (MGP_PahariEiJ_G0031292) #24	Osbpl8 (MGP_PahariEiJ_G0031291) #25	Bbs10 (MGP_PahariEiJ_G0031290) #26	MGP_PahariEiJ_G0031289	Phlda1 (MGP_PahariEiJ_G0031288)	Krr1 (MGP_PahariEiJ_G0031287)	Glipr1 (MGP_PahariEiJ_G0031286)	Glipr1l2 (MGP_PahariEiJ_G0031285)	MGP_PahariEiJ_G0031284	Caps2 (MGP_PahariEiJ_G0031283)	Kcnc2 (MGP_PahariEiJ_G0031282)	Atxn7l3b (MGP_PahariEiJ_G0031281)	MGP_PahariEiJ_G0031280	Trhde (MGP_PahariEiJ_G0031279)
Rat	MODERN SPECIES	17	Mettl25 (ENSRNOG00000027451)	Ccdc59 (ENSRNOG00000004183) #7	ENSRNOG00000063471	Ppfia2 (ENSRNOG00000004353) #9	Acss3 (ENSRNOG00000004448) #10	Lin7a (ENSRNOG00000004527) #11	Myf5 (ENSRNOG00000004768) #12	Myf6 (ENSRNOG00000004878) #13	Ptprq (ENSRNOG00000056915) #14	Otogl (ENSRNOG00000030316) #15	Ppp1r12a (ENSRNOG00000004925) #17	Pawr (ENSRNOG00000005917) #18	Syt1 (ENSRNOG00000006426) #19	Brcc3dc (ENSRNOG00000070196)	Nav3 (ENSRNOG00000052157) #20	E2f7 (ENSRNOG00000026252) #22	Csrp2 (ENSRNOG00000003772) #23	Zdhhc17 (ENSRNOG00000003803) #24	Osbpl8 (ENSRNOG00000026962) #25	ENSRNOG00000062798 #21	Bbs10 (ENSRNOG00000026913) #26	Nap1l1 (ENSRNOG00000003890)	Phlda1 (ENSRNOG00000004019)	Krr1 (ENSRNOG00000004035)	Glipr1 (ENSRNOG00000026644)	Glipr1l2 (ENSRNOG00000049053)	Glipr1l1 (ENSRNOG00000026634)	Caps2 (ENSRNOG00000026600)	Kcnc2 (ENSRNOG00000004077)	Atxn7l3b (ENSRNOG00000059744)	Trhde (ENSRNOG00000005278)
Lesser Egyptian jerboa	MODERN SPECIES	42	Ccdc59 (ENSJJAG00000015263) #7	ENSJJAG00000003779	Ppfia2 (ENSJJAG00000006298) #9	Acss3 (ENSJJAG00000008308) #10	Lin7a (ENSJJAG00000023503) #11	Myf5 (ENSJJAG00000003407) #12	Myf6 (ENSJJAG00000011250) #13	Ptprq (ENSJJAG00000017741) #14	Otogl (ENSJJAG00000019493) #15	Ppp1r12a (ENSJJAG00000023796) #17	Pawr (ENSJJAG00000018666) #18	Syt1 (ENSJJAG00000023399) #19	ENSJJAG00000022372	Nav3 (ENSJJAG00000012332) #20	ENSJJAG00000010552	E2f7 (ENSJJAG00000007878) #22	ENSJJAG00000005723	ENSJJAG00000014135 #23	ENSJJAG00000011419 #24	Osbpl8 (ENSJJAG00000024252) #25	Bbs10 (ENSJJAG00000023405) #26	ENSJJAG00000024142	Nap1l1 (ENSJJAG00000023205)	Phlda1 (ENSJJAG00000023924)	ENSJJAG00000023900	ENSJJAG00000013157	ENSJJAG00000023384	ENSJJAG00000022416	ENSJJAG00000009366	Atxn7l3b (ENSJJAG00000002351)	ENSJJAG00000016750
Kangaroo rat	MODERN SPECIES	322	ENSDORG00000008703	Slc6a15 (ENSDORG00000000388)	Tmtc2 (ENSDORG00000005875)	Mettl25 (ENSDORG00000003006)	Ppfia2 (ENSDORG00000007289) #9	Acss3 (ENSDORG00000007288) #10	Lin7a (ENSDORG00000014355) #11	Myf5 (ENSDORG00000015437) #12	Myf6 (ENSDORG00000015435) #13	Ptprq (ENSDORG00000023208) #14	Otogl (ENSDORG00000028677) #15	Ppp1r12a (ENSDORG00000007157) #17	Pawr (ENSDORG00000029489) #18	Syt1 (ENSDORG00000003724) #19	Nav3 (ENSDORG00000011080) #20	ENSDORG00000026154 #22	Csrp2 (ENSDORG00000012441) #23	Zdhhc17 (ENSDORG00000012435) #24	Osbpl8 (ENSDORG00000000670) #25	Bbs10 (ENSDORG00000000668) #26	Nap1l1 (ENSDORG00000029138)	Phlda1 (ENSDORG00000027757)	ENSDORG00000023399	ENSDORG00000004614	Glipr1 (ENSDORG00000004613)	ENSDORG00000027121	Kcnc2 (ENSDORG00000000056)	Atxn7l3b (ENSDORG00000025438)	ENSDORG00000013399	ENSDORG00000028797	Tph2 (ENSDORG00000000779)
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000036317	PPFIA2 (ENSHGLG00000000429) #9	ACSS3 (ENSHGLG00000004579) #10	ENSHGLG00000003757 #11	MYF5 (ENSHGLG00000003654) #12	MYF6 (ENSHGLG00000003419) #13	PTPRQ (ENSHGLG00000011762) #14	OTOGL (ENSHGLG00000013295) #15	PPP1R12A (ENSHGLG00000014201) #17	ENSHGLG00000036431	PAWR (ENSHGLG00000017940) #18	SYT1 (ENSHGLG00000047548) #19	ENSHGLG00000042592	ENSHGLG00000010015	NAV3 (ENSHGLG00000012083) #20	E2F7 (ENSHGLG00000006491) #22	ENSHGLG00000008206 #23	ENSHGLG00000009233 #24	ENSHGLG00000004489	ENSHGLG00000044176	ENSHGLG00000008641	ENSHGLG00000033319	ENSHGLG00000039577	ENSHGLG00000008111 #25	BBS10 (ENSHGLG00000041362) #26	ENSHGLG00000046259	ENSHGLG00000014189	ENSHGLG00000045931	KRR1 (ENSHGLG00000004459)	GLIPR1 (ENSHGLG00000037317)	ENSHGLG00000037384
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Guinea pig	MODERN SPECIES	9	SLC6A15 (ENSCPOG00000003103)	TMTC2 (ENSCPOG00000005425)	METTL25 (ENSCPOG00000011621)	CCDC59 (ENSCPOG00000036718) #7	PPFIA2 (ENSCPOG00000003459) #9	ACSS3 (ENSCPOG00000003451) #10	LIN7A (ENSCPOG00000001373) #11	MYF5 (ENSCPOG00000007766) #12	MYF6 (ENSCPOG00000030745) #13	PTPRQ (ENSCPOG00000031105) #14	OTOGL (ENSCPOG00000022231) #15	PPP1R12A (ENSCPOG00000004019) #17	PAWR (ENSCPOG00000002469) #18	SYT1 (ENSCPOG00000002054) #19	NAV3 (ENSCPOG00000015431) #20	E2F7 (ENSCPOG00000007375) #22	CSRP2 (ENSCPOG00000031460) #23	ZDHHC17 (ENSCPOG00000012534) #24	OSBPL8 (ENSCPOG00000001130) #25	BBS10 (ENSCPOG00000038158) #26	NAP1L1 (ENSCPOG00000019420)	PHLDA1 (ENSCPOG00000003245)	KRR1 (ENSCPOG00000014353)	GLIPR1 (ENSCPOG00000014351)	ENSCPOG00000013925	ENSCPOG00000011301	GLIPR1L1 (ENSCPOG00000011726)	CAPS2 (ENSCPOG00000011709)	KCNC2 (ENSCPOG00000003474)	ATXN7L3B (ENSCPOG00000040398)	TRHDE (ENSCPOG00000007500)
Hystricomorpha_b	ANCESTRAL SPECIES	13	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Long-tailed chinchilla	MODERN SPECIES	112	TMTC2 (ENSCLAG00000008519)	METTL25 (ENSCLAG00000014989)	CCDC59 (ENSCLAG00000015050) #7	PPFIA2 (ENSCLAG00000008120) #9	ACSS3 (ENSCLAG00000005808) #10	ENSCLAG00000013764 #11	MYF5 (ENSCLAG00000014410) #12	MYF6 (ENSCLAG00000013875) #13	PTPRQ (ENSCLAG00000012232) #14	OTOGL (ENSCLAG00000006526) #15	PPP1R12A (ENSCLAG00000006399) #17	PAWR (ENSCLAG00000008196) #18	SYT1 (ENSCLAG00000004862) #19	ENSCLAG00000005685	NAV3 (ENSCLAG00000012036) #20	E2F7 (ENSCLAG00000007164) #22	CSRP2 (ENSCLAG00000008899) #23	ZDHHC17 (ENSCLAG00000011124) #24	ENSCLAG00000017859	OSBPL8 (ENSCLAG00000010204) #25	BBS10 (ENSCLAG00000007902) #26	ENSCLAG00000005333	PHLDA1 (ENSCLAG00000006934)	KRR1 (ENSCLAG00000005111)	GLIPR1 (ENSCLAG00000006364)	GLIPR1L2 (ENSCLAG00000006004)	GLIPR1L1 (ENSCLAG00000005153)	ENSCLAG00000004453	KCNC2 (ENSCLAG00000009275)	ATXN7L3B (ENSCLAG00000017725)	TRHDE (ENSCLAG00000005841)
Degu	MODERN SPECIES	45	PPFIA2 (ENSODEG00000007419) #9	ACSS3 (ENSODEG00000007503) #10	ENSODEG00000019454	LIN7A (ENSODEG00000007832) #11	MYF5 (ENSODEG00000007510) #12	MYF6 (ENSODEG00000007305) #13	PTPRQ (ENSODEG00000007761) #14	OTOGL (ENSODEG00000007895) #15	PPP1R12A (ENSODEG00000009363) #17	ENSODEG00000019636	PAWR (ENSODEG00000008160) #18	ENSODEG00000007440	SYT1 (ENSODEG00000008387) #19	ENSODEG00000007970	NAV3 (ENSODEG00000010398) #20	ENSODEG00000008575 #22	CSRP2 (ENSODEG00000008449) #23	ZDHHC17 (ENSODEG00000010670) #24	ENSODEG00000007367	OSBPL8 (ENSODEG00000007618) #25	BBS10 (ENSODEG00000007380) #26	ENSODEG00000007344	PHLDA1 (ENSODEG00000019456)	ENSODEG00000006609	ENSODEG00000019616	ENSODEG00000007152	GLIPR1 (ENSODEG00000008406)	ENSODEG00000019533	TMTC1 (ENSODEG00000007589)	ENSODEG00000006579	ERGIC2 (ENSODEG00000007081)
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b	ENSGT00440000039564.b	ENSGT00390000018775.ab	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b	ENSGT00440000039564.b	ENSGT00390000018775.ab	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b	ENSGT00440000039564.b	ENSGT00390000018775.ab	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00390000001376	ENSGT00390000008294.e.b.a.b	ENSGT00940000157371	ENSGT00940000162576
Arctic ground squirrel	MODERN SPECIES	177											OTOGL (ENSUPAG00010005372) #15	PPP1R12A (ENSUPAG00010005325) #17	PAWR (ENSUPAG00010005305) #18	SYT1 (ENSUPAG00010005294) #19	NAV3 (ENSUPAG00010005261) #20	E2F7 (ENSUPAG00010005233) #22	CSRP2 (ENSUPAG00010005224) #23	ZDHHC17 (ENSUPAG00010005181) #24	OSBPL8 (ENSUPAG00010005095) #25	BBS10 (ENSUPAG00010005089) #26	ENSUPAG00010004967	ENSUPAG00010004960
Squirrel	MODERN SPECIES	168															NAV3 (ENSSTOG00000012725) #20	E2F7 (ENSSTOG00000007887) #22	CSRP2 (ENSSTOG00000010876) #23	ZDHHC17 (ENSSTOG00000010869) #24	OSBPL8 (ENSSTOG00000011866) #25	BBS10 (ENSSTOG00000011855) #26	NAP1L1 (ENSSTOG00000003046)	PHLDA1 (ENSSTOG00000020332)	KRR1 (ENSSTOG00000003620)	GLIPR1 (ENSSTOG00000003613)	ENSSTOG00000024468	GLIPR1L1 (ENSSTOG00000020403)	ENSSTOG00000003438	ENSSTOG00000028374	KCNC2 (ENSSTOG00000004842)	ATXN7L3B (ENSSTOG00000023624)	TRHDE (ENSSTOG00000003761)
Alpin marmot	MODERN SPECIES	11	SLC6A15 (ENSMMMG00000001050)	ENSMMMG00000001090	TMTC2 (ENSMMMG00000001120)	METTL25 (ENSMMMG00000001158)	CCDC59 (ENSMMMG00000001213) #7	PPFIA2 (ENSMMMG00000001244) #9	ACSS3 (ENSMMMG00000001391) #10	LIN7A (ENSMMMG00000001429) #11	MYF5 (ENSMMMG00000001446) #12	MYF6 (ENSMMMG00000001463) #13	PTPRQ (ENSMMMG00000001485) #14	OTOGL (ENSMMMG00000001599) #15	PPP1R12A (ENSMMMG00000001751) #17	SYT1 (ENSMMMG00000001991) #19	NAV3 (ENSMMMG00000002035) #20	E2F7 (ENSMMMG00000002119) #22	ENSMMMG00000002164 #23	ZDHHC17 (ENSMMMG00000002185) #24	OSBPL8 (ENSMMMG00000002240) #25	BBS10 (ENSMMMG00000002273) #26	ENSMMMG00000002289	PHLDA1 (ENSMMMG00000002474)	KRR1 (ENSMMMG00000002493)	GLIPR1 (ENSMMMG00000002546)	GLIPR1L2 (ENSMMMG00000002582)	GLIPR1L1 (ENSMMMG00000002592)	CAPS2 (ENSMMMG00000002609)	ENSMMMG00000002677	KCNC2 (ENSMMMG00000002683)	ENSMMMG00000002698	ATXN7L3B (ENSMMMG00000002707)
Eurasian red squirrel	MODERN SPECIES	14	METTL25 (ENSSVLG00005002343)	CCDC59 (ENSSVLG00005002316) #7	PPFIA2 (ENSSVLG00005001201) #9	ACSS3 (ENSSVLG00005000239) #10	BLVRB (ENSSVLG00005025266)	LIN7A (ENSSVLG00005025250) #11	MYF5 (ENSSVLG00005025239) #12	MYF6 (ENSSVLG00005025222) #13	PTPRQ (ENSSVLG00005025041) #14	OTOGL (ENSSVLG00005024601) #15	PPP1R12A (ENSSVLG00005024407) #17	PAWR (ENSSVLG00005024360) #18	SYT1 (ENSSVLG00005024299) #19	NAV3 (ENSSVLG00005023837) #20	ENSSVLG00005023728	E2F7 (ENSSVLG00005023615) #22	ENSSVLG00005023521 #23	ZDHHC17 (ENSSVLG00005023480) #24	OSBPL8 (ENSSVLG00005023307) #25	ENSSVLG00005023266	BBS10 (ENSSVLG00005023257) #26	NAP1L1 (ENSSVLG00005023160)	ENSSVLG00005023108	KRR1 (ENSSVLG00005023069)	GLIPR1 (ENSSVLG00005023023)	ENSSVLG00005023001	GLIPR1L2 (ENSSVLG00005022916)	GLIPR1L1 (ENSSVLG00005022861)	CAPS2 (ENSSVLG00005022512)	KCNC2 (ENSSVLG00005022353)	ATXN7L3B (ENSSVLG00005022316)
Lagomorpha	ANCESTRAL SPECIES	113	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547.f.b	ENSGT00940000162547.f.a	ENSGT00940000162547.e
Rabbit	MODERN SPECIES	15	ENSOCUG00000036764	PPFIA2 (ENSOCUG00000015770) #9	ACSS3 (ENSOCUG00000015752) #10	LIN7A (ENSOCUG00000004203) #11	MYF5 (ENSOCUG00000025477) #12	MYF6 (ENSOCUG00000001457) #13	PTPRQ (ENSOCUG00000011455) #14	OTOGL (ENSOCUG00000014963) #15	ENSOCUG00000037584	PPP1R12A (ENSOCUG00000016701) #17	PAWR (ENSOCUG00000013722) #18	SYT1 (ENSOCUG00000014829) #19	ENSOCUG00000005148	NAV3 (ENSOCUG00000004936) #20	ENSOCUG00000025947	E2F7 (ENSOCUG00000004932) #22	ENSOCUG00000008330 #23	ENSOCUG00000027238	ZDHHC17 (ENSOCUG00000010401) #24	ENSOCUG00000028124	ENSOCUG00000032449	OSBPL8 (ENSOCUG00000010527) #25	BBS10 (ENSOCUG00000010522) #26	NAP1L1 (ENSOCUG00000013857)	PHLDA1 (ENSOCUG00000022950)	KRR1 (ENSOCUG00000003925)	GLIPR1 (ENSOCUG00000003921)	ENSOCUG00000031904	ENSOCUG00000031541	GLIPR1L2 (ENSOCUG00000003916)	ENSOCUG00000003909
Pika	MODERN SPECIES	6842																E2F7 (ENSOPRG00000001896) #22
Tree shrew	MODERN SPECIES	3364																E2F7 (ENSTBEG00000005417) #22
Primates	ANCESTRAL SPECIES	6	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546.c #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024
Hominidae	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546.c #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a	ENSGT00910000147072	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546.c #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Gorilla	MODERN SPECIES	3	CCDC59 (ENSGGOG00000025296) #7	PPFIA2 (ENSGGOG00000026460) #9	ACSS3 (ENSGGOG00000010105) #10	LIN7A (ENSGGOG00000038053) #11	MYF5 (ENSGGOG00000004366) #12	MYF6 (ENSGGOG00000004369) #13	PTPRQ (ENSGGOG00000011494) #14	ENSGGOG00000015088 #15	ENSGGOG00000025286	PPP1R12A (ENSGGOG00000014574) #17	PAWR (ENSGGOG00000010093) #18	ENSGGOG00000022534	SYT1 (ENSGGOG00000024224) #19	ENSGGOG00000002908	NAV3 (ENSGGOG00000006574) #20	E2F7 (ENSGGOG00000012645) #22	ENSGGOG00000038839	ENSGGOG00000041578 #23	ENSGGOG00000039704 #23	ZDHHC17 (ENSGGOG00000023287) #24	ENSGGOG00000023867	OSBPL8 (ENSGGOG00000016140) #25	BBS10 (ENSGGOG00000023091) #26	ENSGGOG00000041304	NAP1L1 (ENSGGOG00000003883)	KRR1 (ENSGGOG00000013596)	GLIPR1 (ENSGGOG00000013591)	GLIPR1L2 (ENSGGOG00000024647)	GLIPR1L1 (ENSGGOG00000001021)	CAPS2 (ENSGGOG00000013620)	KCNC2 (ENSGGOG00000003896)
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546.c #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Pan	ANCESTRAL SPECIES	4	ENSGT00530000063745.b	ENSGT00390000006546.c #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154389.b.e	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00950000182922.a.a.a.b.a.b.a.b.b.a	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371
Chimpanzee	MODERN SPECIES	3	PPFIA2 (ENSPTRG00000005265) #9	ACSS3 (ENSPTRG00000005263) #10	LIN7A (ENSPTRG00000005262) #11	MYF5 (ENSPTRG00000005261) #12	MYF6 (ENSPTRG00000005260) #13	PTPRQ (ENSPTRG00000039205) #14	OTOGL (ENSPTRG00000005257) #15	ENSPTRG00000045837	PPP1R12A (ENSPTRG00000005252) #17	PAWR (ENSPTRG00000005250) #18	SYT1 (ENSPTRG00000024064) #19	ENSPTRG00000050322	ENSPTRG00000044151	ENSPTRG00000046920	NAV3 (ENSPTRG00000005247) #20	E2F7 (ENSPTRG00000005245) #22	ENSPTRG00000051009	CSRP2 (ENSPTRG00000005244) #23	ZDHHC17 (ENSPTRG00000005243) #24	ENSPTRG00000048649	ENSPTRG00000045883	OSBPL8 (ENSPTRG00000005242) #25	BBS10 (ENSPTRG00000005241) #26	ENSPTRG00000043245	NAP1L1 (ENSPTRG00000005240)	PHLDA1 (ENSPTRG00000043613)	KRR1 (ENSPTRG00000005238)	GLIPR1 (ENSPTRG00000005237)	GLIPR1L2 (ENSPTRG00000005236)	GLIPR1L1 (ENSPTRG00000005234)	CAPS2 (ENSPTRG00000005233)
Bonobo	MODERN SPECIES	3	METTL25 (ENSPPAG00000028130)	CCDC59 (ENSPPAG00000030113) #7	PPFIA2 (ENSPPAG00000033118) #9	ACSS3 (ENSPPAG00000040977) #10	LIN7A (ENSPPAG00000026771) #11	MYF5 (ENSPPAG00000028699) #12	MYF6 (ENSPPAG00000032290) #13	PTPRQ (ENSPPAG00000000830) #14	OTOGL (ENSPPAG00000014085) #15	PPP1R12A (ENSPPAG00000030740) #17	PAWR (ENSPPAG00000043711) #18	SYT1 (ENSPPAG00000029261) #19	ENSPPAG00000028521	ENSPPAG00000015674	NAV3 (ENSPPAG00000036134) #20	E2F7 (ENSPPAG00000002532) #22	ENSPPAG00000042681	ENSPPAG00000042089 #23	ZDHHC17 (ENSPPAG00000030097) #24	ENSPPAG00000040481	OSBPL8 (ENSPPAG00000043423) #25	BBS10 (ENSPPAG00000028532) #26	ENSPPAG00000043638	NAP1L1 (ENSPPAG00000043344)	PHLDA1 (ENSPPAG00000030521)	KRR1 (ENSPPAG00000011194)	GLIPR1 (ENSPPAG00000038902)	GLIPR1L2 (ENSPPAG00000038173)	GLIPR1L1 (ENSPPAG00000027759)	CAPS2 (ENSPPAG00000005409)	ENSPPAG00000040201
Human	MODERN SPECIES	3	SLC6A15 (ENSG00000072041)	TMTC2 (ENSG00000179104)	METTL25 (ENSG00000127720)	CCDC59 (ENSG00000133773) #7	PPFIA2 (ENSG00000139220) #9	ACSS3 (ENSG00000111058) #10	LIN7A (ENSG00000111052) #11	MYF5 (ENSG00000111049) #12	MYF6 (ENSG00000111046) #13	PTPRQ (ENSG00000139304) #14	OTOGL (ENSG00000165899) #15	PPP1R12A (ENSG00000058272) #17	PAWR (ENSG00000177425) #18	SYT1 (ENSG00000067715) #19	NAV3 (ENSG00000067798) #20	E2F7 (ENSG00000165891) #22	CSRP2 (ENSG00000175183) #23	ZDHHC17 (ENSG00000186908) #24	OSBPL8 (ENSG00000091039) #25	BBS10 (ENSG00000179941) #26	NAP1L1 (ENSG00000187109)	PHLDA1 (ENSG00000139289)	KRR1 (ENSG00000111615)	GLIPR1 (ENSG00000139278)	GLIPR1L2 (ENSG00000180481)	GLIPR1L1 (ENSG00000173401)	CAPS2 (ENSG00000180881)	KCNC2 (ENSG00000166006)	ATXN7L3B (ENSG00000253719)	TRHDE (ENSG00000072657)	TPH2 (ENSG00000139287)
Orangutan	MODERN SPECIES	3	METTL25 (ENSPPYG00000004805)	CCDC59 (ENSPPYG00000004804) #7	PPFIA2 (ENSPPYG00000004803) #9	ACSS3 (ENSPPYG00000004802) #10	LIN7A (ENSPPYG00000039262) #11	MYF5 (ENSPPYG00000004800) #12	MYF6 (ENSPPYG00000004799) #13	PTPRQ (ENSPPYG00000041069) #14	OTOGL (ENSPPYG00000004797) #15	PPP1R12A (ENSPPYG00000004796) #17	ENSPPYG00000025853	PAWR (ENSPPYG00000004795) #18	SYT1 (ENSPPYG00000004794) #19	ENSPPYG00000004793	NAV3 (ENSPPYG00000004792) #20	E2F7 (ENSPPYG00000004791) #22	ENSPPYG00000031243 #23	ZDHHC17 (ENSPPYG00000004789) #24	OSBPL8 (ENSPPYG00000004788) #25	ENSPPYG00000037353	BBS10 (ENSPPYG00000004787) #26	ENSPPYG00000032561	NAP1L1 (ENSPPYG00000004786)	ENSPPYG00000038710	PHLDA1 (ENSPPYG00000041713)	KRR1 (ENSPPYG00000004785)	GLIPR1 (ENSPPYG00000004784)	GLIPR1L2 (ENSPPYG00000004783)	GLIPR1L1 (ENSPPYG00000004782)	CAPS2 (ENSPPYG00000004781)	KCNC2 (ENSPPYG00000004780)
Gibbon	MODERN SPECIES		SLC6A15 (ENSNLEG00000005336)	TMTC2 (ENSNLEG00000005311)	METTL25 (ENSNLEG00000005299)	CCDC59 (ENSNLEG00000033968) #7	PPFIA2 (ENSNLEG00000005251) #9	ACSS3 (ENSNLEG00000005227) #10	LIN7A (ENSNLEG00000032491) #11	MYF5 (ENSNLEG00000005207) #12	MYF6 (ENSNLEG00000032583) #13	PTPRQ (ENSNLEG00000005154) #14	OTOGL (ENSNLEG00000005115) #15	PPP1R12A (ENSNLEG00000005041) #17	PAWR (ENSNLEG00000005035) #18	SYT1 (ENSNLEG00000004995) #19	NAV3 (ENSNLEG00000004917) #20	E2F7 (ENSNLEG00000004897) #22	ENSNLEG00000028737	ENSNLEG00000004885 #23	ZDHHC17 (ENSNLEG00000004841) #24	OSBPL8 (ENSNLEG00000004750) #25	BBS10 (ENSNLEG00000004748) #26	ENSNLEG00000031630	NAP1L1 (ENSNLEG00000004682)	ENSNLEG00000004680	KRR1 (ENSNLEG00000004647)	GLIPR1 (ENSNLEG00000004629)	GLIPR1L2 (ENSNLEG00000004622)	GLIPR1L1 (ENSNLEG00000004609)	CAPS2 (ENSNLEG00000004582)	KCNC2 (ENSNLEG00000004570)	ATXN7L3B (ENSNLEG00000018759)
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000017839.o.b.b.b.f	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000017839.o.b.b.b.f	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00390000009168.hb	ENSGT01050000244986.b.b.d.a.a.b	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000017839.o.b.b.b.f	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670
Macaca	ANCESTRAL SPECIES	6	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00910000147454	ENSGT00950000183030.m.a.a.b.b.a.b.a	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00390000009168.hb	ENSGT01050000244986.b.b.d.a.a.b	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a.lb	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371
Pig-tailed macaque	MODERN SPECIES	517	MYF5 (ENSMNEG00000039510) #12	MYF6 (ENSMNEG00000019739) #13	PTPRQ (ENSMNEG00000045562) #14	OTOGL (ENSMNEG00000034772) #15	PPP1R12A (ENSMNEG00000033679) #17	PAWR (ENSMNEG00000004020) #18	SYT1 (ENSMNEG00000030551) #19	ENSMNEG00000031657	ENSMNEG00000038165	ENSMNEG00000037055	ENSMNEG00000028899	ENSMNEG00000026858	ENSMNEG00000009689	ENSMNEG00000000985	NAV3 (ENSMNEG00000043424) #20	E2F7 (ENSMNEG00000025875) #22	CSRP2 (ENSMNEG00000030922) #23	ZDHHC17 (ENSMNEG00000028456) #24	ENSMNEG00000035026	ENSMNEG00000032096	OSBPL8 (ENSMNEG00000028835) #25	ENSMNEG00000030308	BBS10 (ENSMNEG00000040224) #26	NAP1L1 (ENSMNEG00000035793)	PHLDA1 (ENSMNEG00000033607)	ENSMNEG00000040738	ENSMNEG00000045114	ENSMNEG00000034922	GLIPR1 (ENSMNEG00000044536)	GLIPR1L2 (ENSMNEG00000044396)	GLIPR1L1 (ENSMNEG00000028603)
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000157479 #10	ENSGT00940000153052.c.b.a.a.a.a.b.b.b	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.b.a.b.c.b	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00950000183030.m.a.a.b.b.a.b.a	ENSGT00940000158014 #20	ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.a.a.b	ENSGT01050000245239.a.a	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a	ENSGT01050000244986.b.b.d.a.a.b.a	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.lb	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000164709.a.b.b.a.b.b.a.a.a.b
Rhesus	MODERN SPECIES	2	MYF5 (ENSMMUG00000011669) #12	MYF6 (ENSMMUG00000011667) #13	PTPRQ (ENSMMUG00000037711) #14	OTOGL (ENSMMUG00000000121) #15	PPP1R12A (ENSMMUG00000019214) #17	ENSMMUG00000053591	PAWR (ENSMMUG00000015179) #18	SYT1 (ENSMMUG00000005530) #19	ENSMMUG00000060137	ENSMMUG00000051304	ENSMMUG00000058640	NAV3 (ENSMMUG00000021329) #20	ENSMMUG00000060140	ENSMMUG00000055171	ENSMMUG00000059985	E2F7 (ENSMMUG00000022846) #22	ENSMMUG00000052719	CSRP2 (ENSMMUG00000018257) #23	ZDHHC17 (ENSMMUG00000018254) #24	ENSMMUG00000057698	OSBPL8 (ENSMMUG00000017864) #25	BBS10 (ENSMMUG00000056087) #26	NAP1L1 (ENSMMUG00000015583)	PHLDA1 (ENSMMUG00000064103)	ENSMMUG00000053099	KRR1 (ENSMMUG00000009640)	GLIPR1L2 (ENSMMUG00000012290)	GLIPR1L1 (ENSMMUG00000012289)	CAPS2 (ENSMMUG00000012288)	KCNC2 (ENSMMUG00000012362)	ENSMMUG00000051853
Crab-eating macaque	MODERN SPECIES	2	PTPRQ (ENSMFAG00000044210) #14	OTOGL (ENSMFAG00000031786) #15	PPP1R12A (ENSMFAG00000034239) #17	ENSMFAG00000049694	ENSMFAG00000063729	PAWR (ENSMFAG00000062333) #18	ENSMFAG00000050054	SYT1 (ENSMFAG00000003495) #19	ENSMFAG00000000157	ENSMFAG00000034379	ENSMFAG00000034925	NAV3 (ENSMFAG00000044289) #20	ENSMFAG00000059233	ENSMFAG00000060207	ENSMFAG00000065572	E2F7 (ENSMFAG00000000355) #22	CSRP2 (ENSMFAG00000033853) #23	ZDHHC17 (ENSMFAG00000042288) #24	ENSMFAG00000034161	ENSMFAG00000047389	ENSMFAG00000057937	OSBPL8 (ENSMFAG00000036321) #25	BBS10 (ENSMFAG00000033883) #26	NAP1L1 (ENSMFAG00000001457)	PHLDA1 (ENSMFAG00000001119)	ENSMFAG00000053039	ENSMFAG00000032969	ENSMFAG00000001123	KRR1 (ENSMFAG00000000042)	GLIPR1 (ENSMFAG00000003978)	GLIPR1L1 (ENSMFAG00000031259)
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00940000153294.m.b.s.f	ENSGT00390000014818.g.b.a.a.a.b.b	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00390000009168.hb	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00940000158854.ab.a	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000155142.i.a.a	ENSGT00390000003133.i.a	ENSGT00940000163914.c.a	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00390000009168.hb	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00940000158854.ab.a	ENSGT00390000018052.k	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371
Drill	MODERN SPECIES	821				PPP1R12A (ENSMLEG00000040285) #17	PAWR (ENSMLEG00000041230) #18	ENSMLEG00000039162	SYT1 (ENSMLEG00000029930) #19	ENSMLEG00000037266	ENSMLEG00000014509	ENSMLEG00000028959	ENSMLEG00000035186	ENSMLEG00000020902	ENSMLEG00000034369	ENSMLEG00000027815	NAV3 (ENSMLEG00000033553) #20	E2F7 (ENSMLEG00000040254) #22	CSRP2 (ENSMLEG00000041421) #23	ZDHHC17 (ENSMLEG00000009010) #24	ENSMLEG00000042240	ENSMLEG00000040060	OSBPL8 (ENSMLEG00000035972) #25	BBS10 (ENSMLEG00000042359) #26	NAP1L1 (ENSMLEG00000044434)	PHLDA1 (ENSMLEG00000037110)	ENSMLEG00000027928	ENSMLEG00000039434	ENSMLEG00000042283	KRR1 (ENSMLEG00000037074)	GLIPR1 (ENSMLEG00000037327)	GLIPR1L2 (ENSMLEG00000040765)	GLIPR1L1 (ENSMLEG00000020393)
Sooty mangabey	MODERN SPECIES	582	ENSCATG00000038856	PPFIA2 (ENSCATG00000040747) #9	ACSS3 (ENSCATG00000030914) #10	LIN7A (ENSCATG00000029939) #11	MYF5 (ENSCATG00000042162) #12	MYF6 (ENSCATG00000029151) #13	PTPRQ (ENSCATG00000039610) #14	OTOGL (ENSCATG00000038125) #15	PPP1R12A (ENSCATG00000038278) #17	PAWR (ENSCATG00000034935) #18	SYT1 (ENSCATG00000033541) #19	ENSCATG00000044466	ENSCATG00000040529	ENSCATG00000017337	NAV3 (ENSCATG00000032040) #20	E2F7 (ENSCATG00000035481) #22	CSRP2 (ENSCATG00000040566) #23	ZDHHC17 (ENSCATG00000040479) #24	ENSCATG00000044128	ENSCATG00000039522	ENSCATG00000005498	OSBPL8 (ENSCATG00000036635) #25	BBS10 (ENSCATG00000042101) #26	ENSCATG00000039964	NAP1L1 (ENSCATG00000032285)	ENSCATG00000010102	ENSCATG00000040362	KRR1 (ENSCATG00000038219)	GLIPR1 (ENSCATG00000007700)	GLIPR1L2 (ENSCATG00000032595)	GLIPR1L1 (ENSCATG00000035838)
Olive baboon	MODERN SPECIES	19	ACSS3 (ENSPANG00000019084) #10	LIN7A (ENSPANG00000005931) #11	MYF5 (ENSPANG00000020394) #12	MYF6 (ENSPANG00000044306) #13	ENSPANG00000005319	PTPRQ (ENSPANG00000014456) #14	OTOGL (ENSPANG00000012907) #15	ENSPANG00000047805	PPP1R12A (ENSPANG00000026354) #17	PAWR (ENSPANG00000009557) #18	SYT1 (ENSPANG00000009048) #19	ENSPANG00000040020	ENSPANG00000015985	ENSPANG00000043139	NAV3 (ENSPANG00000007911) #20	E2F7 (ENSPANG00000004929) #22	CSRP2 (ENSPANG00000023047) #23	ZDHHC17 (ENSPANG00000004050) #24	ENSPANG00000028903	OSBPL8 (ENSPANG00000009379) #25	BBS10 (ENSPANG00000026355) #26	NAP1L1 (ENSPANG00000009165)	PHLDA1 (ENSPANG00000013115)	ENSPANG00000048738	ENSPANG00000047595	ENSPANG00000031665	KRR1 (ENSPANG00000019085)	GLIPR1 (ENSPANG00000005562)	GLIPR1L2 (ENSPANG00000036151)	GLIPR1L1 (ENSPANG00000032562)	CAPS2 (ENSPANG00000017443)
Vervet Monkey	MODERN SPECIES	2	CCDC59 (ENSCSAG00000003867) #7	ENSCSAG00000003868 #9	PPFIA2 (ENSCSAG00000003876) #9	ACSS3 (ENSCSAG00000003882) #10	LIN7A (ENSCSAG00000003887) #11	MYF5 (ENSCSAG00000003889) #12	MYF6 (ENSCSAG00000003893) #13	PTPRQ (ENSCSAG00000003913) #14	OTOGL (ENSCSAG00000003939) #15	PPP1R12A (ENSCSAG00000003956) #17	PAWR (ENSCSAG00000003962) #18	SYT1 (ENSCSAG00000003971) #19	ENSCSAG00000018914	ENSCSAG00000018912	ENSCSAG00000003979 #20	E2F7 (ENSCSAG00000003998) #22	CSRP2 (ENSCSAG00000004009) #23	ZDHHC17 (ENSCSAG00000004014) #24	OSBPL8 (ENSCSAG00000004024) #25	BBS10 (ENSCSAG00000004028) #26	NAP1L1 (ENSCSAG00000004030)	ENSCSAG00000018909	KRR1 (ENSCSAG00000004034)	GLIPR1 (ENSCSAG00000004038)	GLIPR1L2 (ENSCSAG00000004041)	GLIPR1L1 (ENSCSAG00000004045)	CAPS2 (ENSCSAG00000004056)	KCNC2 (ENSCSAG00000004064)	ATXN7L3B (ENSCSAG00000018907)	TRHDE (ENSCSAG00000004072)	TBC1D15 (ENSCSAG00000004078)
Rhinopithecus	ANCESTRAL SPECIES	358														ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371
Black snub-nosed monkey	MODERN SPECIES	416												ENSRBIG00000044674	ENSRBIG00000044553	ENSRBIG00000035549	NAV3 (ENSRBIG00000032816) #20	E2F7 (ENSRBIG00000044218) #22	CSRP2 (ENSRBIG00000001565) #23	ZDHHC17 (ENSRBIG00000036627) #24	OSBPL8 (ENSRBIG00000042807) #25	BBS10 (ENSRBIG00000044840) #26	ENSRBIG00000044471	ENSRBIG00000039726	PHLDA1 (ENSRBIG00000034999)	ENSRBIG00000034429	ENSRBIG00000029304	KRR1 (ENSRBIG00000033716)	GLIPR1 (ENSRBIG00000034588)	GLIPR1L2 (ENSRBIG00000040782)	GLIPR1L1 (ENSRBIG00000031640)
Golden snub-nosed monkey	MODERN SPECIES	1031																E2F7 (ENSRROG00000031867) #22	CSRP2 (ENSRROG00000031526) #23	ZDHHC17 (ENSRROG00000039872) #24	OSBPL8 (ENSRROG00000042405) #25	BBS10 (ENSRROG00000028824) #26	ENSRROG00000014250	NAP1L1 (ENSRROG00000026775)	ENSRROG00000033201	PHLDA1 (ENSRROG00000007029)	ENSRROG00000024996	ENSRROG00000037708	KRR1 (ENSRROG00000029658)	GLIPR1 (ENSRROG00000043395)	ENSRROG00000041620	ENSRROG00000016846	GLIPR1L2 (ENSRROG00000017927)
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00910000148286	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.u.a.b #23	ENSGT00940000154980.u.a.a #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00910000147072.b	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576
Cebidae	ANCESTRAL SPECIES	2	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.u.a.a #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00910000147072.b	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Cebidae_a	ANCESTRAL SPECIES	8	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00550000074807.d	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.u.a.a #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00910000147072.b	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Capuchin	MODERN SPECIES	67													ALCAM (ENSCCAG00000034808)	ENSCCAG00000036645	CBLB (ENSCCAG00000031829)	E2F7 (ENSCCAG00000020477) #22	CSRP2 (ENSCCAG00000027954) #23	ZDHHC17 (ENSCCAG00000024753) #24	ENSCCAG00000026832 #25	BBS10 (ENSCCAG00000010754) #26	NAP1L1 (ENSCCAG00000030757)	ENSCCAG00000029133	PHLDA1 (ENSCCAG00000030384)	GLIPR1 (ENSCCAG00000033906)	KRR1 (ENSCCAG00000021457)	GLIPR1L2 (ENSCCAG00000021275)	GLIPR1L1 (ENSCCAG00000006107)	CAPS2 (ENSCCAG00000033136)	KCNC2 (ENSCCAG00000028917)	ENSCCAG00000000428	ENSCCAG00000010640
Bolivian squirrel monkey	MODERN SPECIES	67	ACSS3 (ENSSBOG00000018710) #10	ENSSBOG00000022040	ENSSBOG00000034028	LIN7A (ENSSBOG00000030034) #11	MYF5 (ENSSBOG00000019536) #12	MYF6 (ENSSBOG00000021822) #13	PTPRQ (ENSSBOG00000027538) #14	OTOGL (ENSSBOG00000033681) #15	ENSSBOG00000026289	PPP1R12A (ENSSBOG00000033660) #17	PAWR (ENSSBOG00000025731) #18	SYT1 (ENSSBOG00000033271) #19	ENSSBOG00000025849	ENSSBOG00000036163	NAV3 (ENSSBOG00000036099) #20	E2F7 (ENSSBOG00000028674) #22	ENSSBOG00000014459 #23	ZDHHC17 (ENSSBOG00000036173) #24	OSBPL8 (ENSSBOG00000030671) #25	BBS10 (ENSSBOG00000022169) #26	ENSSBOG00000034714	KRR1 (ENSSBOG00000029569)	GLIPR1 (ENSSBOG00000033770)	ENSSBOG00000025791	GLIPR1L2 (ENSSBOG00000027126)	GLIPR1L1 (ENSSBOG00000033891)	CAPS2 (ENSSBOG00000018991)	KCNC2 (ENSSBOG00000022617)	ATXN7L3B (ENSSBOG00000006505)	TRHDE (ENSSBOG00000029813)	TPH2 (ENSSBOG00000029996)
Marmoset	MODERN SPECIES	21	METTL25 (ENSCJAG00000019400)	CCDC59 (ENSCJAG00000019396) #7	PPFIA2 (ENSCJAG00000019370) #9	ACSS3 (ENSCJAG00000019352) #10	LIN7A (ENSCJAG00000019343) #11	MYF5 (ENSCJAG00000019340) #12	MYF6 (ENSCJAG00000081789) #13	PTPRQ (ENSCJAG00000019332) #14	OTOGL (ENSCJAG00000019323) #15	PPP1R12A (ENSCJAG00000019271) #17	PAWR (ENSCJAG00000019265) #18	SYT1 (ENSCJAG00000019262) #19	ENSCJAG00000078194	ENSCJAG00000078124	NAV3 (ENSCJAG00000019176) #20	E2F7 (ENSCJAG00000019162) #22	ENSCJAG00000019153 #23	ZDHHC17 (ENSCJAG00000019075) #24	OSBPL8 (ENSCJAG00000001055) #25	BBS10 (ENSCJAG00000001113) #26	ENSCJAG00000078161	NAP1L1 (ENSCJAG00000001115)	PHLDA1 (ENSCJAG00000072700)	ENSCJAG00000075772	ENSCJAG00000077543	ENSCJAG00000070252	ENSCJAG00000077700	KRR1 (ENSCJAG00000001181)	ENSCJAG00000069534	GLIPR1L2 (ENSCJAG00000001222)	ENSCJAG00000083004
Mas night monkey	MODERN SPECIES	833	ACSS3 (ENSANAG00000034361) #10	LIN7A (ENSANAG00000032889) #11	MYF5 (ENSANAG00000023208) #12	MYF6 (ENSANAG00000024892) #13	PTPRQ (ENSANAG00000035871) #14	OTOGL (ENSANAG00000024695) #15	ENSANAG00000036662	ENSANAG00000019658	PPP1R12A (ENSANAG00000034824) #17	PAWR (ENSANAG00000022396) #18	SYT1 (ENSANAG00000025826) #19	ENSANAG00000023157	ENSANAG00000023582	NAV3 (ENSANAG00000037686) #20	ENSANAG00000032226	E2F7 (ENSANAG00000036545) #22	ENSANAG00000021237 #23	ENSANAG00000028981	ENSANAG00000023471	ZDHHC17 (ENSANAG00000030636) #24
Tarsier	MODERN SPECIES	6007																E2F7 (ENSTSYG00000008243) #22	CSRP2 (ENSTSYG00000007974) #23	ZDHHC17 (ENSTSYG00000007950) #24
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394.b #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394.b #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Mouse lemur	MODERN SPECIES	29	TMTC2 (ENSMICG00000031682)	METTL25 (ENSMICG00000027175)	CCDC59 (ENSMICG00000041747) #7	PPFIA2 (ENSMICG00000010822) #9	ACSS3 (ENSMICG00000010809) #10	LIN7A (ENSMICG00000033894) #11	MYF5 (ENSMICG00000036139) #12	MYF6 (ENSMICG00000004274) #13	PTPRQ (ENSMICG00000038737) #14	OTOGL (ENSMICG00000026871) #15	PPP1R12A (ENSMICG00000032335) #17	ENSMICG00000032513	PAWR (ENSMICG00000031649) #18	SYT1 (ENSMICG00000015517) #19	NAV3 (ENSMICG00000003403) #20	E2F7 (ENSMICG00000013872) #22	ENSMICG00000014368	CSRP2 (ENSMICG00000047076) #23	ZDHHC17 (ENSMICG00000033453) #24	ENSMICG00000029525	OSBPL8 (ENSMICG00000000969) #25	BBS10 (ENSMICG00000042947) #26	NAP1L1 (ENSMICG00000006036)	KRR1 (ENSMICG00000015127)	GLIPR1 (ENSMICG00000015121)	GLIPR1L2 (ENSMICG00000037234)	ENSMICG00000015888	CAPS2 (ENSMICG00000015872)	KCNC2 (ENSMICG00000017734)	ATXN7L3B (ENSMICG00000033344)	TRHDE (ENSMICG00000014223)
Lemuriformes_a	ANCESTRAL SPECIES	201															ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000161696	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576
Coquerels sifaka	MODERN SPECIES	402														NAV3 (ENSPCOG00000028313) #20	ENSPCOG00000013372	E2F7 (ENSPCOG00000022301) #22	CSRP2 (ENSPCOG00000019899) #23	ZDHHC17 (ENSPCOG00000018266) #24	OSBPL8 (ENSPCOG00000022869) #25	BBS10 (ENSPCOG00000025178) #26	ENSPCOG00000022339	PHLDA1 (ENSPCOG00000020854)	KRR1 (ENSPCOG00000012869)	GLIPR1 (ENSPCOG00000017258)
Greater bamboo lemur	MODERN SPECIES	749													NAV3 (ENSPSMG00000004708) #20	ENSPSMG00000004524	ENSPSMG00000004520	E2F7 (ENSPSMG00000004506) #22	CSRP2 (ENSPSMG00000004453) #23	ZDHHC17 (ENSPSMG00000004438) #24	ENSPSMG00000004399	OSBPL8 (ENSPSMG00000004309) #25
Bushbaby	MODERN SPECIES	122	METTL25 (ENSOGAG00000004384)	CCDC59 (ENSOGAG00000004383) #7	ENSOGAG00000025088	PPFIA2 (ENSOGAG00000014823) #9	ACSS3 (ENSOGAG00000014813) #10	LIN7A (ENSOGAG00000004616) #11	MYF5 (ENSOGAG00000001039) #12	MYF6 (ENSOGAG00000001038) #13	PTPRQ (ENSOGAG00000025362) #14	OTOGL (ENSOGAG00000030466) #15	PPP1R12A (ENSOGAG00000010740) #17	PAWR (ENSOGAG00000027944) #18	SYT1 (ENSOGAG00000009943) #19	NAV3 (ENSOGAG00000010604) #20	ENSOGAG00000030290	E2F7 (ENSOGAG00000010821) #22	CSRP2 (ENSOGAG00000013999) #23	ZDHHC17 (ENSOGAG00000013994) #24	OSBPL8 (ENSOGAG00000017084) #25	BBS10 (ENSOGAG00000025855) #26	NAP1L1 (ENSOGAG00000010319)	PHLDA1 (ENSOGAG00000010317)	ENSOGAG00000010313	GLIPR1 (ENSOGAG00000010309)	GLIPR1L2 (ENSOGAG00000010303)	ENSOGAG00000010299	CAPS2 (ENSOGAG00000010291)	ENSOGAG00000006608	KCNC2 (ENSOGAG00000000768)
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157713 #22
Common shrew	MODERN SPECIES	4683																E2F7 (ENSSARG00000004122) #22
Hedgehog	MODERN SPECIES	6020																ENSEEUG00000000248 #22
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Carnivora	ANCESTRAL SPECIES	3	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Caniformia	ANCESTRAL SPECIES	20	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Caniformia_b	ANCESTRAL SPECIES	18	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Ursidae	ANCESTRAL SPECIES	13	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Ursus	ANCESTRAL SPECIES	23															ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576
Polar bear	DUPLICATION
Polar bear	MODERN SPECIES	113														NAV3 (ENSUMAG00000021555) #20	ENSUMAG00000021519 #22	ENSUMAG00000021516 #22	CSRP2 (ENSUMAG00000021507) #23	ZDHHC17 (ENSUMAG00000021425) #24	OSBPL8 (ENSUMAG00000021330) #25	BBS10 (ENSUMAG00000021286) #26	NAP1L1 (ENSUMAG00000021259)	KRR1 (ENSUMAG00000021247)	GLIPR1 (ENSUMAG00000021245)	ENSUMAG00000021242	GLIPR1L2 (ENSUMAG00000021237)	GLIPR1L1 (ENSUMAG00000021232)	ENSUMAG00000021228	KCNC2 (ENSUMAG00000021219)	ENSUMAG00000021205	ATXN7L3B (ENSUMAG00000021202)	ENSUMAG00000021192
Polar bear	MODERN SPECIES	113															NAV3 (ENSUMAG00000021555) #20	ENSUMAG00000021519 #22	ENSUMAG00000021516 #22	CSRP2 (ENSUMAG00000021507) #23	ZDHHC17 (ENSUMAG00000021425) #24	OSBPL8 (ENSUMAG00000021330) #25	BBS10 (ENSUMAG00000021286) #26	NAP1L1 (ENSUMAG00000021259)	KRR1 (ENSUMAG00000021247)	GLIPR1 (ENSUMAG00000021245)	ENSUMAG00000021242	GLIPR1L2 (ENSUMAG00000021237)	GLIPR1L1 (ENSUMAG00000021232)	ENSUMAG00000021228	KCNC2 (ENSUMAG00000021219)	ENSUMAG00000021205	ATXN7L3B (ENSUMAG00000021202)
American black bear	DUPLICATION
American black bear	MODERN SPECIES	1323																ENSUAMG00000027982 #22	ENSUAMG00000027981 #22
American black bear	MODERN SPECIES	1323															ENSUAMG00000027982 #22	ENSUAMG00000027981 #22
Giant Panda	MODERN SPECIES	6	TMTC2 (ENSAMEG00000016881)	METTL25 (ENSAMEG00000016877)	CCDC59 (ENSAMEG00000016875) #7	PPFIA2 (ENSAMEG00000013096) #9	ACSS3 (ENSAMEG00000013162) #10	LIN7A (ENSAMEG00000013191) #11	MYF5 (ENSAMEG00000013193) #12	MYF6 (ENSAMEG00000027013) #13	PTPRQ (ENSAMEG00000013219) #14	OTOGL (ENSAMEG00000013267) #15	PPP1R12A (ENSAMEG00000013280) #17	PAWR (ENSAMEG00000013370) #18	SYT1 (ENSAMEG00000013376) #19	NAV3 (ENSAMEG00000006673) #20	ENSAMEG00000024301	E2F7 (ENSAMEG00000007247) #22	CSRP2 (ENSAMEG00000006632) #23	ZDHHC17 (ENSAMEG00000006600) #24	OSBPL8 (ENSAMEG00000006513) #25	BBS10 (ENSAMEG00000006510) #26	NAP1L1 (ENSAMEG00000006463)	PHLDA1 (ENSAMEG00000006460)	KRR1 (ENSAMEG00000006437)	GLIPR1 (ENSAMEG00000006427)	GLIPR1L2 (ENSAMEG00000006424)	GLIPR1L1 (ENSAMEG00000006420)	CAPS2 (ENSAMEG00000006378)	KCNC2 (ENSAMEG00000000555)	ENSAMEG00000030227	ATXN7L3B (ENSAMEG00000018742)	TRHDE (ENSAMEG00000000316)
Mustelinae	ANCESTRAL SPECIES	4	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215.b.a #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Ferret	MODERN SPECIES	196					ENSMPUG00000017457	ENSMPUG00000017458	OTOGL (ENSMPUG00000017459) #15	PPP1R12A (ENSMPUG00000017460) #17	ENSMPUG00000017461	PAWR (ENSMPUG00000017462) #18	SYT1 (ENSMPUG00000017463) #19	ENSMPUG00000017464	NAV3 (ENSMPUG00000017465) #20	ENSMPUG00000017466	ENSMPUG00000017467	E2F7 (ENSMPUG00000017468) #22	CSRP2 (ENSMPUG00000017469) #23	ZDHHC17 (ENSMPUG00000017470) #24	ENSMPUG00000017471	OSBPL8 (ENSMPUG00000017472) #25	BBS10 (ENSMPUG00000017473) #26	NAP1L1 (ENSMPUG00000017474)	KRR1 (ENSMPUG00000017475)	GLIPR1 (ENSMPUG00000017476)	GLIPR1L2 (ENSMPUG00000017477)	ENSMPUG00000017478	CAPS2 (ENSMPUG00000017479)	KCNC2 (ENSMPUG00000017480)	ENSMPUG00000017481	TRHDE (ENSMPUG00000017482)	TPH2 (ENSMPUG00000017483)
American mink	MODERN SPECIES	22	METTL25 (ENSNVIG00000000819)	TAP26 (ENSNVIG00000000828) #7	PPFIA2 (ENSNVIG00000000848) #9	ACSS3 (ENSNVIG00000001229) #10	LIN7A (ENSNVIG00000001269) #11	MYF5 (ENSNVIG00000001283) #12	MYF6 (ENSNVIG00000001298) #13	PTPRQ (ENSNVIG00000001320) #14	OTOGL (ENSNVIG00000001579) #15	ENSNVIG00000001919	PPP1R12A (ENSNVIG00000001940) #17	PAWR (ENSNVIG00000002283) #18	SYT1 (ENSNVIG00000002313) #19	ENSNVIG00000002371	NAV3 (ENSNVIG00000002412) #20	E2F7 (ENSNVIG00000002695) #22	ENSNVIG00000002763 #23	ZDHHC17 (ENSNVIG00000002801) #24	OSBPL8 (ENSNVIG00000002847) #25	BBS10 (ENSNVIG00000003073) #26	ENSNVIG00000003110	ENSNVIG00000003475	PHLDA1 (ENSNVIG00000003490)	KRR1 (ENSNVIG00000003506)	GLIPR1 (ENSNVIG00000003537)	ENSNVIG00000003558	GLIPR1L1 (ENSNVIG00000003573)	CAPS2 (ENSNVIG00000003600)	KCNC2 (ENSNVIG00000003636)	ATXN7L3B (ENSNVIG00000003667)
Canidae	ANCESTRAL SPECIES	12	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000005922.b.d.b.a.j	ENSGT00390000018775	ENSGT00940000163058	ENSGT00940000163275	ENSGT00940000162245	ENSGT00550000075058	ENSGT00940000154888.e.a	ENSGT00940000153886.a.a.k	ENSGT00940000153649.B
Canis_lupus	DUPLICATION
Canis_lupus	ANCESTRAL SPECIES	16	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000158890.p.a.f	ENSGT00940000157713.q #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00940000154612.m.a.g.a.b	ENSGT00390000005922.b.d.b.a.j	ENSGT00390000018775	ENSGT00940000163058	ENSGT00940000163275	ENSGT00940000162245	ENSGT00550000075058	ENSGT00940000154888.e.a	ENSGT00940000153886.a.a.k
Dog	MODERN SPECIES	6	CCDC59 (ENSCAFG00845011151) #7	PPFIA2 (ENSCAFG00845010311) #9	ACSS3 (ENSCAFG00845009887) #10	LIN7A (ENSCAFG00845009762) #11	ENSCAFG00845009734 #12	MYF6 (ENSCAFG00845009704) #13	PTPRQ (ENSCAFG00845008887) #14	OTOGL (ENSCAFG00845008423) #15	ENSCAFG00845008343	ENSCAFG00845008317	PPP1R12A (ENSCAFG00845007952) #17	PAWR (ENSCAFG00845007786) #18	SYT1 (ENSCAFG00845007651) #19	NAV3 (ENSCAFG00845007345) #20	ENSCAFG00845007259	E2F7 (ENSCAFG00845006897) #22	ENSCAFG00845006746 #23	ZDHHC17 (ENSCAFG00845006644) #24	OSBPL8 (ENSCAFG00845006249) #25	OSBPL8 (ENSCAFG00845006103) #26	ENSCAFG00845006055	NAP1L1 (ENSCAFG00845005932)	ENSCAFG00845005752	ENSCAFG00845027430	ENSCAFG00845027179	OR4E1 (ENSCAFG00845027061)	OR4E2 (ENSCAFG00845026975)	SALL2 (ENSCAFG00845026880)	METTL3 (ENSCAFG00845026804)	TOX4 (ENSCAFG00845026715)	RAB2B (ENSCAFG00845026579)
Dingo	MODERN SPECIES	277	CCDC59 (ENSCAFG00020016153) #7	PPFIA2 (ENSCAFG00020016113) #9	ACSS3 (ENSCAFG00020016033) #10	LIN7A (ENSCAFG00020016013) #11	MYF5 (ENSCAFG00020016010) #12	MYF6 (ENSCAFG00020016005) #13	PTPRQ (ENSCAFG00020015957) #14	OTOGL (ENSCAFG00020015840) #15	PPP1R12A (ENSCAFG00020015626) #17	PAWR (ENSCAFG00020015607) #18	SYT1 (ENSCAFG00020015603) #19	ENSCAFG00020015601	NAV3 (ENSCAFG00020015546) #20	ENSCAFG00020015535	ENSCAFG00020015528	ENSCAFG00020015522 #22	ENSCAFG00020015518 #22	CSRP2 (ENSCAFG00020015512) #23	ZDHHC17 (ENSCAFG00020015453) #24	OSBPL8 (ENSCAFG00020015356) #25	BBS10 (ENSCAFG00020015335) #26	NAP1L1 (ENSCAFG00020015328)	ENSCAFG00020015316	ENSCAFG00020015310	ENSCAFG00020015296	KRR1 (ENSCAFG00020015286)	OR4E1 (ENSCAFG00020015285)	OR4E2 (ENSCAFG00020015283)	SALL2 (ENSCAFG00020015273)	METTL3 (ENSCAFG00020015265)	ENSCAFG00020015261
Canis_lupus	ANCESTRAL SPECIES																	ENSGT00940000157713.r #22
Dingo	MODERN SPECIES	277	PPFIA2 (ENSCAFG00020016113) #9	ACSS3 (ENSCAFG00020016033) #10	LIN7A (ENSCAFG00020016013) #11	MYF5 (ENSCAFG00020016010) #12	MYF6 (ENSCAFG00020016005) #13	PTPRQ (ENSCAFG00020015957) #14	OTOGL (ENSCAFG00020015840) #15	PPP1R12A (ENSCAFG00020015626) #17	PAWR (ENSCAFG00020015607) #18	SYT1 (ENSCAFG00020015603) #19	ENSCAFG00020015601	NAV3 (ENSCAFG00020015546) #20	ENSCAFG00020015535	ENSCAFG00020015528	ENSCAFG00020015522 #22	ENSCAFG00020015518 #22	CSRP2 (ENSCAFG00020015512) #23	ZDHHC17 (ENSCAFG00020015453) #24	OSBPL8 (ENSCAFG00020015356) #25	BBS10 (ENSCAFG00020015335) #26	NAP1L1 (ENSCAFG00020015328)	ENSCAFG00020015316	ENSCAFG00020015310	ENSCAFG00020015296	KRR1 (ENSCAFG00020015286)	OR4E1 (ENSCAFG00020015285)	OR4E2 (ENSCAFG00020015283)	SALL2 (ENSCAFG00020015273)	METTL3 (ENSCAFG00020015265)	ENSCAFG00020015261	ENSCAFG00020015235
Red fox	MODERN SPECIES	9	METTL25 (ENSVVUG00000010971)	CCDC59 (ENSVVUG00000010954) #7	ENSVVUG00000010950	PPFIA2 (ENSVVUG00000010745) #9	ACSS3 (ENSVVUG00000010570) #10	LIN7A (ENSVVUG00000010554) #11	ENSVVUG00000010537 #12	MYF6 (ENSVVUG00000010529) #13	PTPRQ (ENSVVUG00000010403) #14	ENSVVUG00000010366	OTOGL (ENSVVUG00000010103) #15	PPP1R12A (ENSVVUG00000010043) #17	PAWR (ENSVVUG00000010028) #18	SYT1 (ENSVVUG00000009998) #19	NAV3 (ENSVVUG00000009882) #20	E2F7 (ENSVVUG00000009839) #22	CSRP2 (ENSVVUG00000009828) #23	ZDHHC17 (ENSVVUG00000009811) #24	OSBPL8 (ENSVVUG00000009692) #25	BBS10 (ENSVVUG00000009650) #26	NAP1L1 (ENSVVUG00000009610)	ENSVVUG00000009581	KRR1 (ENSVVUG00000009566)	OR4E1 (ENSVVUG00000009561)	OR4E2 (ENSVVUG00000009557)	ENSVVUG00000009540	METTL3 (ENSVVUG00000009513)	TOX4 (ENSVVUG00000009505)	RAB2B (ENSVVUG00000009502)	CHD8 (ENSVVUG00000009444)	SUPT16H (ENSVVUG00000009434)
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576.g	ENSGT00940000155878	ENSGT00950000182885.A.b
Panthera	ANCESTRAL SPECIES		ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576.g	ENSGT00940000155878	ENSGT00950000182885.A.b
Tiger	MODERN SPECIES	285					PPFIA2 (ENSPTIG00000008257) #9	ACSS3 (ENSPTIG00000013083) #10	LIN7A (ENSPTIG00000013465) #11	MYF5 (ENSPTIG00000013849) #12	MYF6 (ENSPTIG00000014009) #13	PTPRQ (ENSPTIG00000014182) #14	OTOGL (ENSPTIG00000017536) #15	PPP1R12A (ENSPTIG00000003820) #17	PAWR (ENSPTIG00000012722) #18	SYT1 (ENSPTIG00000013094) #19	NAV3 (ENSPTIG00000013673) #20	E2F7 (ENSPTIG00000016920) #22	CSRP2 (ENSPTIG00000019308) #23	ZDHHC17 (ENSPTIG00000019755) #24	OSBPL8 (ENSPTIG00000019983) #25	BBS10 (ENSPTIG00000020383) #26	NAP1L1 (ENSPTIG00000003186)	KRR1 (ENSPTIG00000009202)	GLIPR1 (ENSPTIG00000010519)	GLIPR1L2 (ENSPTIG00000011160)	GLIPR1L1 (ENSPTIG00000011807)	CAPS2 (ENSPTIG00000012593)	ENSPTIG00000013059	ATXN7L3B (ENSPTIG00000004593)
Panthera_a	ANCESTRAL SPECIES	12	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576.g	ENSGT00940000155878	ENSGT00950000182885.A.b
leopard	MODERN SPECIES	27	METTL25 (ENSPPRG00000020885)	CCDC59 (ENSPPRG00000022500) #7	ENSPPRG00000024977	PPFIA2 (ENSPPRG00000001816) #9	ACSS3 (ENSPPRG00000003248) #10	LIN7A (ENSPPRG00000003439) #11	MYF5 (ENSPPRG00000003820) #12	MYF6 (ENSPPRG00000003909) #13	PTPRQ (ENSPPRG00000005300) #14	OTOGL (ENSPPRG00000007761) #15	PPP1R12A (ENSPPRG00000012756) #17	ENSPPRG00000013642	PAWR (ENSPPRG00000013959) #18	SYT1 (ENSPPRG00000014210) #19	NAV3 (ENSPPRG00000022007) #20	E2F7 (ENSPPRG00000024442) #22	CSRP2 (ENSPPRG00000024205) #23	ZDHHC17 (ENSPPRG00000024071) #24	ENSPPRG00000023878	OSBPL8 (ENSPPRG00000023047) #25	BBS10 (ENSPPRG00000022774) #26	ENSPPRG00000000117	NAP1L1 (ENSPPRG00000001906)	ENSPPRG00000002277	KRR1 (ENSPPRG00000002897)	GLIPR1 (ENSPPRG00000003347)	GLIPR1L2 (ENSPPRG00000003609)	GLIPR1L1 (ENSPPRG00000004020)	CAPS2 (ENSPPRG00000004169)	ENSPPRG00000004904	KCNC2 (ENSPPRG00000006532)
lion	MODERN SPECIES	7	TMTC2 (ENSPLOG00000004411)	METTL25 (ENSPLOG00000004346)	CCDC59 (ENSPLOG00000004335) #7	PPFIA2 (ENSPLOG00000003973) #9	ACSS3 (ENSPLOG00000003703) #10	LIN7A (ENSPLOG00000003686) #11	MYF5 (ENSPLOG00000003675) #12	MYF6 (ENSPLOG00000003667) #13	PTPRQ (ENSPLOG00000003543) #14	OTOGL (ENSPLOG00000003151) #15	PPP1R12A (ENSPLOG00000002780) #17	PAWR (ENSPLOG00000002686) #18	SYT1 (ENSPLOG00000002662) #19	ENSPLOG00000002650	NAV3 (ENSPLOG00000002454) #20	E2F7 (ENSPLOG00000002314) #22	CSRP2 (ENSPLOG00000002279) #23	ZDHHC17 (ENSPLOG00000002249) #24	OSBPL8 (ENSPLOG00000002092) #25	BBS10 (ENSPLOG00000002053) #26	NAP1L1 (ENSPLOG00000001982)	PHLDA1 (ENSPLOG00000001933)	KRR1 (ENSPLOG00000001901)	GLIPR1 (ENSPLOG00000001884)	GLIPR1L2 (ENSPLOG00000001854)	GLIPR1L1 (ENSPLOG00000001832)	CAPS2 (ENSPLOG00000001806)	KCNC2 (ENSPLOG00000001773)	ENSPLOG00000001747	ENSPLOG00000001740	ENSPLOG00000001713
Cat	MODERN SPECIES	238	ENSFCAG00000035513	METTL25 (ENSFCAG00000013377)	CCDC59 (ENSFCAG00000028462) #7	PPFIA2 (ENSFCAG00000012993) #9	ACSS3 (ENSFCAG00000012992) #10	LIN7A (ENSFCAG00000015014) #11	MYF5 (ENSFCAG00000015011) #12	MYF6 (ENSFCAG00000015010) #13	PTPRQ (ENSFCAG00000026313) #14	OTOGL (ENSFCAG00000022141) #15	PPP1R12A (ENSFCAG00000027965) #17	PAWR (ENSFCAG00000026300) #18	SYT1 (ENSFCAG00000024865) #19	ENSFCAG00000048215	NAV3 (ENSFCAG00000013128) #20	E2F7 (ENSFCAG00000010756) #22	CSRP2 (ENSFCAG00000006548) #23	ZDHHC17 (ENSFCAG00000027034) #24	OSBPL8 (ENSFCAG00000027470) #25	NAP1L1 (ENSFCAG00000000279)	PHLDA1 (ENSFCAG00000032023)	ENSFCAG00000050261	KRR1 (ENSFCAG00000025788)	GLIPR1 (ENSFCAG00000005203)	GLIPR1L2 (ENSFCAG00000036590)	ENSFCAG00000041131	ENSFCAG00000047626	CAPS2 (ENSFCAG00000040419)	KCNC2 (ENSFCAG00000024443)	ENSFCAG00000028757	ENSFCAG00000050848
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Equus	ANCESTRAL SPECIES	21	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Donkey	MODERN SPECIES	11	METTL25 (ENSEASG00005021236)	CCDC59 (ENSEASG00005021237) #7	ENSEASG00005011113	PPFIA2 (ENSEASG00005021241) #9	ACSS3 (ENSEASG00005021261) #10	ENSEASG00005024557	LIN7A (ENSEASG00005021265) #11	MYF5 (ENSEASG00005021266) #12	MYF6 (ENSEASG00005021268) #13	PTPRQ (ENSEASG00005021271) #14	OTOGL (ENSEASG00005021304) #15	PPP1R12A (ENSEASG00005021353) #17	PAWR (ENSEASG00005033077) #18	SYT1 (ENSEASG00005021375) #19	NAV3 (ENSEASG00005021551) #20	E2F7 (ENSEASG00005021935) #22	ENSEASG00005021936 #23	ZDHHC17 (ENSEASG00005021939) #24	OSBPL8 (ENSEASG00005021942) #25	BBS10 (ENSEASG00005021945) #26	NAP1L1 (ENSEASG00005021946)	PHLDA1 (ENSEASG00005027836)	KRR1 (ENSEASG00005021952)	GLIPR1 (ENSEASG00005024066)	GLIPR1L2 (ENSEASG00005021956)	GLIPR1L1 (ENSEASG00005032803)	CAPS2 (ENSEASG00005021957)	KCNC2 (ENSEASG00005021959)	ATXN7L3B (ENSEASG00005030269)	TRHDE (ENSEASG00005021964)	TPH2 (ENSEASG00005021971)
Horse	MODERN SPECIES	20	TSPAN19 (ENSECAG00000037294)	SLC6A15 (ENSECAG00000018897)	TMTC2 (ENSECAG00000014638)	METTL25 (ENSECAG00000010894)	CCDC59 (ENSECAG00000010450) #7	PPFIA2 (ENSECAG00000011682) #9	ACSS3 (ENSECAG00000008242) #10	LIN7A (ENSECAG00000002823) #11	MYF5 (ENSECAG00000020047) #13	PTPRQ (ENSECAG00000013221) #14	OTOGL (ENSECAG00000009954) #15	PPP1R12A (ENSECAG00000020406) #17	PAWR (ENSECAG00000019505) #18	SYT1 (ENSECAG00000012832) #19	NAV3 (ENSECAG00000000121) #20	E2F7 (ENSECAG00000017963) #22	CSRP2 (ENSECAG00000015606) #23	ZDHHC17 (ENSECAG00000006626) #24	ENSECAG00000058140	OSBPL8 (ENSECAG00000015542) #25	BBS10 (ENSECAG00000015525) #26	NAP1L1 (ENSECAG00000000066)	ENSECAG00000001900	KRR1 (ENSECAG00000017498)	GLIPR1 (ENSECAG00000015687)	ENSECAG00000054232	ENSECAG00000053308	ENSECAG00000029754	GLIPR1L2 (ENSECAG00000049297)	GLIPR1L1 (ENSECAG00000015592)	CAPS2 (ENSECAG00000011231)
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00940000167051	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00940000167051	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Greater horseshoe bat	MODERN SPECIES	1	ENSRFEG00010014611	TMTC2 (ENSRFEG00010014525)	METTL25 (ENSRFEG00010014462)	CCDC59 (ENSRFEG00010014412) #7	PPFIA2 (ENSRFEG00010011014) #9	ACSS3 (ENSRFEG00010010509) #10	LIN7A (ENSRFEG00010010463) #11	MYF5 (ENSRFEG00010010395) #12	MYF6 (ENSRFEG00010010368) #13	PTPRQ (ENSRFEG00010009562) #14	OTOGL (ENSRFEG00010007970) #15	PPP1R12A (ENSRFEG00010007686) #17	PAWR (ENSRFEG00010007574) #18	SYT1 (ENSRFEG00010007403) #19	NAV3 (ENSRFEG00010006668) #20	E2F7 (ENSRFEG00010006442) #22	CSRP2 (ENSRFEG00010006389) #23	ZDHHC17 (ENSRFEG00010006316) #24	OSBPL8 (ENSRFEG00010006253) #25	BBS10 (ENSRFEG00010004681) #26	NAP1L1 (ENSRFEG00010004645)	ENSRFEG00010004601	ENSRFEG00010004593	GLIPR1 (ENSRFEG00010004575)	GLIPR1L2 (ENSRFEG00010004536)	GLIPR1L1 (ENSRFEG00010004502)	CAPS2 (ENSRFEG00010004481)	KCNC2 (ENSRFEG00010004462)	ENSRFEG00010004445	TRHDE (ENSRFEG00010004421)	TPH2 (ENSRFEG00010004392)
Microbat	MODERN SPECIES	946	TMTC2 (ENSMLUG00000010233)	METTL25 (ENSMLUG00000008084)	CCDC59 (ENSMLUG00000008071) #7	PPFIA2 (ENSMLUG00000001537) #9	ACSS3 (ENSMLUG00000001527) #10	LIN7A (ENSMLUG00000001526) #11	MYF5 (ENSMLUG00000004943) #12	MYF6 (ENSMLUG00000004940) #13	PTPRQ (ENSMLUG00000006091) #14	OTOGL (ENSMLUG00000005553) #15	PPP1R12A (ENSMLUG00000005477) #17	ENSMLUG00000005757 #18	SYT1 (ENSMLUG00000005752) #19	ENSMLUG00000027140	NAV3 (ENSMLUG00000010374) #20	E2F7 (ENSMLUG00000012116) #22	CSRP2 (ENSMLUG00000002384) #23	ZDHHC17 (ENSMLUG00000002375) #24	ENSMLUG00000003587	ENSMLUG00000029930	OSBPL8 (ENSMLUG00000005046) #25	BBS10 (ENSMLUG00000001850) #26	NAP1L1 (ENSMLUG00000029307)
Megabat	MODERN SPECIES	1983																E2F7 (ENSPVAG00000000288) #22
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576	ENSGT00940000155878
Suina	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Chacoan peccary	MODERN SPECIES	871		TMTC2 (ENSCWAG00000013168)	METTL25 (ENSCWAG00000013127)	CCDC59 (ENSCWAG00000013098) #7	PPFIA2 (ENSCWAG00000010523) #9	ACSS3 (ENSCWAG00000010300) #10	LIN7A (ENSCWAG00000010238) #11	MYF5 (ENSCWAG00000010199) #12	MYF6 (ENSCWAG00000010168) #13	PTPRQ (ENSCWAG00000009402) #14	OTOGL (ENSCWAG00000007720) #15	PPP1R12A (ENSCWAG00000007564) #17	PAWR (ENSCWAG00000007454) #18	SYT1 (ENSCWAG00000007382) #19	NAV3 (ENSCWAG00000006671) #20	E2F7 (ENSCWAG00000006403) #22	CSRP2 (ENSCWAG00000006361) #23	ZDHHC17 (ENSCWAG00000006304) #24	OSBPL8 (ENSCWAG00000006143) #25	BBS10 (ENSCWAG00000006105) #26	NAP1L1 (ENSCWAG00000005937)	PHLDA1 (ENSCWAG00000005900)	ENSCWAG00000005880	KRR1 (ENSCWAG00000005721)	GLIPR1 (ENSCWAG00000005686)	GLIPR1L2 (ENSCWAG00000005529)	GLIPR1L1 (ENSCWAG00000005477)	CAPS2 (ENSCWAG00000005425)	KCNC2 (ENSCWAG00000005315)	ATXN7L3B (ENSCWAG00000005294)	ENSCWAG00000005273
Pig	MODERN SPECIES	13	PPFIA2 (ENSSSCG00000000940) #9	ACSS3 (ENSSSCG00000000939) #10	LIN7A (ENSSSCG00000040348) #11	ENSSSCG00000042719	MYF5 (ENSSSCG00000000937) #12	MYF6 (ENSSSCG00000026533) #13	PTPRQ (ENSSSCG00000031716) #14	OTOGL (ENSSSCG00000000943) #15	PPP1R12A (ENSSSCG00000038973) #17	PAWR (ENSSSCG00000036560) #18	SYT1 (ENSSSCG00000000948) #19	ENSSSCG00000049637	ENSSSCG00000052129	NAV3 (ENSSSCG00000029249) #20	ENSSSCG00000044299	E2F7 (ENSSSCG00000000950) #22	ENSSSCG00000043521	CSRP2 (ENSSSCG00000000951) #23	ZDHHC17 (ENSSSCG00000000952) #24	ENSSSCG00000025041
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576	ENSGT00940000155878
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000154172.ab.b	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000014572.eb.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000154172.ab.b	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000014572.eb.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000154172.ab.b	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000014572.eb.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000154172.ab.b	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000014572.eb.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000154172.ab.b	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00940000154980.bb.a #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000014572.eb.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Beluga whale	DUPLICATION
Beluga whale	MODERN SPECIES	39			PPFIA2 (ENSDLEG00000005438) #9	ACSS3 (ENSDLEG00000005911) #10	LIN7A (ENSDLEG00000005973) #11	MYF5 (ENSDLEG00000006018) #12	MYF6 (ENSDLEG00000006023) #13	PTPRQ (ENSDLEG00000006066) #14	OTOGL (ENSDLEG00000006234) #15	PPP1R12A (ENSDLEG00000006433) #17	ENSDLEG00000006442	PAWR (ENSDLEG00000006445) #18	ENSDLEG00000006452	SYT1 (ENSDLEG00000006456) #19	NAV3 (ENSDLEG00000006608) #20	ENSDLEG00000007322 #22	ENSDLEG00000007329 #22	CSRP2 (ENSDLEG00000007353) #23	ZDHHC17 (ENSDLEG00000007362) #24	ENSDLEG00000007371	OSBPL8 (ENSDLEG00000007401) #25	BBS10 (ENSDLEG00000007426) #26	ENSDLEG00000007438	PHLDA1 (ENSDLEG00000007521)	ENSDLEG00000007528	KRR1 (ENSDLEG00000007544)	GLIPR1 (ENSDLEG00000007560)	GLIPR1L2 (ENSDLEG00000000224)	KCNC2 (ENSDLEG00000000278)	ATXN7L3B (ENSDLEG00000000389)	ENSDLEG00000000403
Beluga whale	MODERN SPECIES	39		PPFIA2 (ENSDLEG00000005438) #9	ACSS3 (ENSDLEG00000005911) #10	LIN7A (ENSDLEG00000005973) #11	MYF5 (ENSDLEG00000006018) #12	MYF6 (ENSDLEG00000006023) #13	PTPRQ (ENSDLEG00000006066) #14	OTOGL (ENSDLEG00000006234) #15	PPP1R12A (ENSDLEG00000006433) #17	ENSDLEG00000006442	PAWR (ENSDLEG00000006445) #18	ENSDLEG00000006452	SYT1 (ENSDLEG00000006456) #19	NAV3 (ENSDLEG00000006608) #20	ENSDLEG00000007322 #22	ENSDLEG00000007329 #22	CSRP2 (ENSDLEG00000007353) #23	ZDHHC17 (ENSDLEG00000007362) #24	ENSDLEG00000007371	OSBPL8 (ENSDLEG00000007401) #25	BBS10 (ENSDLEG00000007426) #26	ENSDLEG00000007438	PHLDA1 (ENSDLEG00000007521)	ENSDLEG00000007528	KRR1 (ENSDLEG00000007544)	GLIPR1 (ENSDLEG00000007560)	GLIPR1L2 (ENSDLEG00000000224)	KCNC2 (ENSDLEG00000000278)	ATXN7L3B (ENSDLEG00000000389)	ENSDLEG00000000403	TRHDE (ENSDLEG00000000423)
Narwhal	MODERN SPECIES	313	CCDC59 (ENSMMNG00015020720) #7	PPFIA2 (ENSMMNG00015020218) #9	ACSS3 (ENSMMNG00015019853) #10	ENSMMNG00015019830	LIN7A (ENSMMNG00015019774) #11	MYF5 (ENSMMNG00015019736) #12	MYF6 (ENSMMNG00015019715) #13	PTPRQ (ENSMMNG00015019359) #14	OTOGL (ENSMMNG00015018567) #15	ENSMMNG00015018420	PPP1R12A (ENSMMNG00015018194) #17	ENSMMNG00015018085	PAWR (ENSMMNG00015018035) #18	SYT1 (ENSMMNG00015017994) #19	NAV3 (ENSMMNG00015017728) #20	E2F7 (ENSMMNG00015017553) #22	CSRP2 (ENSMMNG00015017494) #23	ENSMMNG00015017474	ZDHHC17 (ENSMMNG00015017285) #24	OSBPL8 (ENSMMNG00015017163) #25	BBS10 (ENSMMNG00015017120) #26	NAP1L1 (ENSMMNG00015016626)	PHLDA1 (ENSMMNG00015016497)	ENSMMNG00015016472	KRR1 (ENSMMNG00015016424)	GLIPR1 (ENSMMNG00015016368)	GLIPR1L2 (ENSMMNG00015016289)	KCNC2 (ENSMMNG00015016164)	ATXN7L3B (ENSMMNG00015016119)	ENSMMNG00015016102	TRHDE (ENSMMNG00015016061)
Vaquita	MODERN SPECIES	1	METTL25 (ENSPSNG00000005420)	ENSPSNG00000005450 #7	PPFIA2 (ENSPSNG00000005685) #9	ACSS3 (ENSPSNG00000006403) #10	LIN7A (ENSPSNG00000006484) #11	MYF5 (ENSPSNG00000006510) #12	MYF6 (ENSPSNG00000006531) #13	PTPRQ (ENSPSNG00000006652) #14	OTOGL (ENSPSNG00000007188) #15	PPP1R12A (ENSPSNG00000008207) #17	ENSPSNG00000008403	PAWR (ENSPSNG00000008439) #18	SYT1 (ENSPSNG00000008513) #19	ENSPSNG00000008562	NAV3 (ENSPSNG00000009074) #20	E2F7 (ENSPSNG00000010547) #22	CSRP2 (ENSPSNG00000010823) #23	ZDHHC17 (ENSPSNG00000010872) #24	ENSPSNG00000010920	ENSPSNG00000010941	OSBPL8 (ENSPSNG00000010975) #25	BBS10 (ENSPSNG00000011255) #26	ENSPSNG00000011336	ENSPSNG00000011534	ENSPSNG00000011566	KRR1 (ENSPSNG00000011619)	GLIPR1 (ENSPSNG00000011694)	ENSPSNG00000011741	ENSPSNG00000011783	KCNC2 (ENSPSNG00000011897)	ENSPSNG00000012078
Dolphin	MODERN SPECIES	5125																E2F7 (ENSTTRG00000000110) #22
Sperm whale	MODERN SPECIES	17	ENSPCTG00005020220	METTL25 (ENSPCTG00005020146)	CCDC59 (ENSPCTG00005020122) #7	PPFIA2 (ENSPCTG00005017124) #9	ACSS3 (ENSPCTG00005016578) #10	LIN7A (ENSPCTG00005016469) #11	MYF5 (ENSPCTG00005016429) #12	MYF6 (ENSPCTG00005016374) #13	PTPRQ (ENSPCTG00005015293) #14	OTOGL (ENSPCTG00005013033) #15	ENSPCTG00005012953	PPP1R12A (ENSPCTG00005012575) #17	PAWR (ENSPCTG00005012474) #18	SYT1 (ENSPCTG00005012311) #19	NAV3 (ENSPCTG00005010415) #20	E2F7 (ENSPCTG00005009995) #22	CSRP2 (ENSPCTG00005009938) #23	ZDHHC17 (ENSPCTG00005009874) #24	OSBPL8 (ENSPCTG00005009709) #25	BBS10 (ENSPCTG00005009666) #26	ENSPCTG00005009647	ENSPCTG00005009623	NAP1L1 (ENSPCTG00005009406)	PHLDA1 (ENSPCTG00005009371)	ENSPCTG00005009342	KRR1 (ENSPCTG00005009253)	GLIPR1 (ENSPCTG00005009154)	GLIPR1L2 (ENSPCTG00005008930)	GLIPR1L1 (ENSPCTG00005008822)	CAPS2 (ENSPCTG00005008725)	KCNC2 (ENSPCTG00005008582)
Blue whale	MODERN SPECIES	1	CCDC59 (ENSBMSG00010008631) #7	PPFIA2 (ENSBMSG00010007808) #9	ACSS3 (ENSBMSG00010007621) #10	ENSBMSG00010007609	LIN7A (ENSBMSG00010007592) #11	MYF5 (ENSBMSG00010007571) #12	MYF6 (ENSBMSG00010007564) #13	PTPRQ (ENSBMSG00010007468) #14	OTOGL (ENSBMSG00010021255) #15	ENSBMSG00010021208	PPP1R12A (ENSBMSG00010021198) #17	PAWR (ENSBMSG00010021183) #18	SYT1 (ENSBMSG00010021177) #19	ENSBMSG00010021165	NAV3 (ENSBMSG00010021020) #20	E2F7 (ENSBMSG00010020948) #22	CSRP2 (ENSBMSG00010020929) #23	ZDHHC17 (ENSBMSG00010020913) #24	OSBPL8 (ENSBMSG00010020883) #25	BBS10 (ENSBMSG00010020864) #26	NAP1L1 (ENSBMSG00010020766)	PHLDA1 (ENSBMSG00010020734)	ENSBMSG00010020727	KRR1 (ENSBMSG00010020702)	GLIPR1 (ENSBMSG00010020669)	GLIPR1L2 (ENSBMSG00010020577)	GLIPR1L1 (ENSBMSG00010020548)	CAPS2 (ENSBMSG00010020525)	KCNC2 (ENSBMSG00010020489)	TRHDE (ENSBMSG00010020456)	TPH2 (ENSBMSG00010020429)
Pecora	ANCESTRAL SPECIES	3	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Percora_a	ANCESTRAL SPECIES	3	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Bovidae	ANCESTRAL SPECIES	3	ENSGT00390000013187.b	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00390000012446.o.b	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb.b	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Caprinae	ANCESTRAL SPECIES		ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT00390000013187.b	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a.n #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb.b	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Goat	MODERN SPECIES	24	ENSCHIG00000005384	PPFIA2 (ENSCHIG00000022919) #9	ACSS3 (ENSCHIG00000023281) #10	LIN7A (ENSCHIG00000003123) #11	MYF5 (ENSCHIG00000015029) #12	MYF6 (ENSCHIG00000021667) #13	PTPRQ (ENSCHIG00000026657) #14	OTOGL (ENSCHIG00000001357) #15	PPP1R12A (ENSCHIG00000007263) #17	PAWR (ENSCHIG00000014049) #18	SYT1 (ENSCHIG00000027174) #19	ENSCHIG00000020619	NAV3 (ENSCHIG00000012255) #20	ENSCHIG00000009714	ENSCHIG00000017418	E2F7 (ENSCHIG00000023455) #22	CSRP2 (ENSCHIG00000025767) #23	ZDHHC17 (ENSCHIG00000009471) #24	OSBPL8 (ENSCHIG00000010416) #25	BBS10 (ENSCHIG00000016567) #26	PHLDA1 (ENSCHIG00000005054)	KRR1 (ENSCHIG00000018496)	GLIPR1 (ENSCHIG00000024224)	ENSCHIG00000010162	ENSCHIG00000017904	CAPS2 (ENSCHIG00000023572)	ENSCHIG00000011941	ENSCHIG00000018503	ATXN7L3B (ENSCHIG00000009745)	ENSCHIG00000009502	ENSCHIG00000012666
Rambouillet Sheep	MODERN SPECIES	19	TSPAN19 (ENSOARG00020007275)	SLC6A15 (ENSOARG00020007201)	TMTC2 (ENSOARG00020015711)	CCDC59 (ENSOARG00020015621) #7	PPFIA2 (ENSOARG00020009934) #9	ACSS3 (ENSOARG00020009124) #10	LIN7A (ENSOARG00020009053) #11	MYF5 (ENSOARG00020009026) #12	MYF6 (ENSOARG00020008989) #13	MYF6 (ENSOARG00020008943) #13	PTPRQ (ENSOARG00020008080) #14	PPP1R12A (ENSOARG00020005817) #17	PAWR (ENSOARG00020005665) #18	SYT1 (ENSOARG00020005626) #19	NAV3 (ENSOARG00020003813) #20	E2F7 (ENSOARG00020003529) #22	CSRP2 (ENSOARG00020003468) #23	ZDHHC17 (ENSOARG00020003403) #24	ENSOARG00020003381	BBS10 (ENSOARG00020003354) #26	OSBPL8 (ENSOARG00020003030) #25	ENSOARG00020002933	PHLDA1 (ENSOARG00020002913)	KRR1 (ENSOARG00020002893)	GLIPR1 (ENSOARG00020002870)	ENSOARG00020002828	GLIPR1L1 (ENSOARG00020002811)	CAPS2 (ENSOARG00020002788)	KCNC2 (ENSOARG00020002747)	ATXN7L3B (ENSOARG00020002735)	ENSOARG00020002731
Bovinae	ANCESTRAL SPECIES	17	ENSGT00390000013187.b	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00390000012446.o.b	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb.b.b	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Bos	ANCESTRAL SPECIES	2	ENSGT00390000003710.c.a.b.b	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00390000012446.o.b	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.a.b	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb.b.b	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Bos_b	ANCESTRAL SPECIES	4	ENSGT00390000013187.b	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT01030000234758.a.a.b.a.a.b.b.a.a	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000263748	ENSGT00940000158014 #20	ENSGT00390000012446.o.b	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.a.b	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb.b.b.f.b	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Hybrid Bos Indicus	MODERN SPECIES	24	ENSBIXG00005009217	ACSS3 (ENSBIXG00005009198) #10	ENSBIXG00005009169	LIN7A (ENSBIXG00005009155) #11	MYF5 (ENSBIXG00005009143) #12	MYF6 (ENSBIXG00005009131) #13	PTPRQ (ENSBIXG00005009087) #14	OTOGL (ENSBIXG00005008900) #15	PPP1R12A (ENSBIXG00005000226) #17	ENSBIXG00005000182	PAWR (ENSBIXG00005000179) #18	SYT1 (ENSBIXG00005008356) #19	ENSBIXG00005008283	NAV3 (ENSBIXG00005000135) #20	ENSBIXG00005008045	E2F7 (ENSBIXG00005008016) #22	CSRP2 (ENSBIXG00005007979) #23	ZDHHC17 (ENSBIXG00005000041) #24	OSBPL8 (ENSBIXG00005007884) #25	ENSBIXG00005029293	BBS10 (ENSBIXG00005029298) #26	ENSBIXG00005029325	PHLDA1 (ENSBIXG00005029359)	ENSBIXG00005029389	KRR1 (ENSBIXG00005029408)	GLIPR1 (ENSBIXG00005029431)	ENSBIXG00005029442	GLIPR1L1 (ENSBIXG00005029466)	CAPS2 (ENSBIXG00005029482)	KCNC2 (ENSBIXG00005029515)	ENSBIXG00005029561
Cow	MODERN SPECIES	24	ENSBTAG00000053526	PPFIA2 (ENSBTAG00000003036) #9	ACSS3 (ENSBTAG00000018694) #10	LIN7A (ENSBTAG00000011367) #11	MYF5 (ENSBTAG00000026972) #12	MYF6 (ENSBTAG00000014003) #13	PTPRQ (ENSBTAG00000026977) #14	OTOGL (ENSBTAG00000011336) #15	PPP1R12A (ENSBTAG00000014609) #17	ENSBTAG00000048833	PAWR (ENSBTAG00000043949) #18	SYT1 (ENSBTAG00000034693) #19	ENSBTAG00000054695	NAV3 (ENSBTAG00000009852) #20	ENSBTAG00000054109	E2F7 (ENSBTAG00000016931) #22	CSRP2 (ENSBTAG00000013406) #23	ZDHHC17 (ENSBTAG00000021756) #24	OSBPL8 (ENSBTAG00000004427) #25	BBS10 (ENSBTAG00000050467) #26	PHLDA1 (ENSBTAG00000034985)	KRR1 (ENSBTAG00000011591)	GLIPR1 (ENSBTAG00000011590)	GLIPR1L2 (ENSBTAG00000019260)	GLIPR1L1 (ENSBTAG00000004569)	CAPS2 (ENSBTAG00000014859)	ENSBTAG00000054123	ATXN7L3B (ENSBTAG00000035083)	TRHDE (ENSBTAG00000018575)	TPH2 (ENSBTAG00000020792)	TBC1D15 (ENSBTAG00000012828)
Bos_a	ANCESTRAL SPECIES	3	ENSGT00390000013187.b	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.b.a.a.b.a.a.a	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000168324	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00390000012446.o.b	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.a.b	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb.b.b	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878
Wild yak	MODERN SPECIES	581																E2F7 (ENSBMUG00000000593) #22	CSRP2 (ENSBMUG00000000626) #23	ZDHHC17 (ENSBMUG00000000646) #24
Domestic yak	MODERN SPECIES	24	ENSBGRG00000003736	MYF5 (ENSBGRG00000003759) #12	MYF6 (ENSBGRG00000003786) #13	PTPRQ (ENSBGRG00000003831) #14	ENSBGRG00000005290	OTOGL (ENSBGRG00000005461) #15	PPP1R12A (ENSBGRG00000006560) #17	ENSBGRG00000007448	PAWR (ENSBGRG00000007479) #18	ENSBGRG00000007603	SYT1 (ENSBGRG00000007621) #19	NAV3 (ENSBGRG00000007767) #20	ENSBGRG00000009036	ENSBGRG00000009079	ENSBGRG00000009095	E2F7 (ENSBGRG00000009145) #22	ENSBGRG00000009376 #23	ZDHHC17 (ENSBGRG00000009471) #24	ENSBGRG00000009858	OSBPL8 (ENSBGRG00000009892) #25	BBS10 (ENSBGRG00000010078) #26	ENSBGRG00000010174	PHLDA1 (ENSBGRG00000010374)	ENSBGRG00000010394	KRR1 (ENSBGRG00000010440)	GLIPR1 (ENSBGRG00000010721)	GLIPR1L2 (ENSBGRG00000010806)	ENSBGRG00000011010	CAPS2 (ENSBGRG00000011068)	KCNC2 (ENSBGRG00000011149)	ENSBGRG00000011407
American bison	MODERN SPECIES	2940														ENSBBBG00000021397	NAV3 (ENSBBBG00000021636) #20	E2F7 (ENSBBBG00000021699) #22	CSRP2 (ENSBBBG00000021745) #23	ZDHHC17 (ENSBBBG00000007523) #24	OSBPL8 (ENSBBBG00000021874) #25	BBS10 (ENSBBBG00000021881) #26	NAP1L1 (ENSBBBG00000022264)	PHLDA1 (ENSBBBG00000022301)
Siberian musk deer	MODERN SPECIES	161															ENSMMSG00000008018	E2F7 (ENSMMSG00000007800) #22	ENSMMSG00000007753 #23	ZDHHC17 (ENSMMSG00000007709) #24	OSBPL8 (ENSMMSG00000007416) #25	ENSMMSG00000007025	PHLDA1 (ENSMMSG00000006968)	ENSMMSG00000006950	KRR1 (ENSMMSG00000006803)	GLIPR1 (ENSMMSG00000006761)	GLIPR1L2 (ENSMMSG00000006598)	GLIPR1L1 (ENSMMSG00000006495)	CAPS2 (ENSMMSG00000006455)	KCNC2 (ENSMMSG00000006316)	ATXN7L3B (ENSMMSG00000006291)	ENSMMSG00000006282
Yarkand deer	MODERN SPECIES	22	ENSCHYG00000021532	PPFIA2 (ENSCHYG00000018601) #9	ACSS3 (ENSCHYG00000018161) #10	LIN7A (ENSCHYG00000018063) #11	MYF5 (ENSCHYG00000018006) #12	MYF6 (ENSCHYG00000017934) #13	PTPRQ (ENSCHYG00000015685) #14	OTOGL (ENSCHYG00000013254) #15	PPP1R12A (ENSCHYG00000011940) #17	ENSCHYG00000011841	PAWR (ENSCHYG00000011616) #18	SYT1 (ENSCHYG00000011518) #19	ENSCHYG00000011512	NAV3 (ENSCHYG00000010069) #20	ENSCHYG00000009932	E2F7 (ENSCHYG00000009596) #22	ENSCHYG00000009520	CSRP2 (ENSCHYG00000009422) #23	ZDHHC17 (ENSCHYG00000009052) #24	OSBPL8 (ENSCHYG00000008637) #25	ENSCHYG00000008327	PHLDA1 (ENSCHYG00000008287)	KRR1 (ENSCHYG00000008210)	GLIPR1 (ENSCHYG00000008170)	GLIPR1L2 (ENSCHYG00000008064)	GLIPR1L1 (ENSCHYG00000008035)	CAPS2 (ENSCHYG00000007943)	KCNC2 (ENSCHYG00000007653)	ATXN7L3B (ENSCHYG00000007602)	ENSCHYG00000007590	TRHDE (ENSCHYG00000007528)
Camelidae	ANCESTRAL SPECIES	39	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00910000147024	ENSGT00940000162576	ENSGT00940000155878
Alpaca	MODERN SPECIES	1665																E2F7 (ENSVPAG00000011151) #22
Arabian camel	MODERN SPECIES	3	SLC6A15 (ENSCDRG00005005426)	TMTC2 (ENSCDRG00005005499)	METTL25 (ENSCDRG00005005578)	CCDC59 (ENSCDRG00005005635) #7	PPFIA2 (ENSCDRG00005005786) #9	ACSS3 (ENSCDRG00005008842) #10	LIN7A (ENSCDRG00005009181) #11	MYF5 (ENSCDRG00005009235) #12	MYF6 (ENSCDRG00005009281) #13	PTPRQ (ENSCDRG00005009356) #14	OTOGL (ENSCDRG00005010509) #15	PPP1R12A (ENSCDRG00005012542) #17	PAWR (ENSCDRG00005014596) #18	SYT1 (ENSCDRG00005014660) #19	NAV3 (ENSCDRG00005014880) #20	E2F7 (ENSCDRG00005015968) #22	CSRP2 (ENSCDRG00005016043) #23	ZDHHC17 (ENSCDRG00005016120) #24	OSBPL8 (ENSCDRG00005016392) #25	BBS10 (ENSCDRG00005016659) #26	NAP1L1 (ENSCDRG00005016698)	PHLDA1 (ENSCDRG00005016995)	ENSCDRG00005017029	ENSCDRG00005017128	ENSCDRG00005017149	ENSCDRG00005017179	GLIPR1L1 (ENSCDRG00005017244)	CAPS2 (ENSCDRG00005017344)	KCNC2 (ENSCDRG00005017383)	ENSCDRG00005017473	ATXN7L3B (ENSCDRG00005017489)
Atlantogenata	ANCESTRAL SPECIES	16	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b
Afrotheria	ANCESTRAL SPECIES	8	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Tenrec	MODERN SPECIES	5837																E2F7 (ENSETEG00000014750) #22
Afrotheria_a	ANCESTRAL SPECIES	8	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000162576	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Hyrax	MODERN SPECIES	4937																E2F7 (ENSPCAG00000000596) #22
Elephant	MODERN SPECIES	196	ENSLAFG00000029547	TMTC2 (ENSLAFG00000018670)	METTL25 (ENSLAFG00000015370)	CCDC59 (ENSLAFG00000015368) #7	PPFIA2 (ENSLAFG00000011055) #9	ACSS3 (ENSLAFG00000011051) #10	LIN7A (ENSLAFG00000014801) #11	MYF5 (ENSLAFG00000016473) #12	MYF6 (ENSLAFG00000016476) #13	PTPRQ (ENSLAFG00000009382) #14	ENSLAFG00000016020 #15	PPP1R12A (ENSLAFG00000014619) #17	ENSLAFG00000007186 #18	SYT1 (ENSLAFG00000013359) #19	NAV3 (ENSLAFG00000001793) #20	E2F7 (ENSLAFG00000017902) #22	ENSLAFG00000028909	CSRP2 (ENSLAFG00000006735) #23	ZDHHC17 (ENSLAFG00000006732) #24	OSBPL8 (ENSLAFG00000009398) #25	BBS10 (ENSLAFG00000009397) #26	NAP1L1 (ENSLAFG00000005711)	ENSLAFG00000008030	KRR1 (ENSLAFG00000015986)	GLIPR1 (ENSLAFG00000031551)	GLIPR1L2 (ENSLAFG00000006750)	CAPS2 (ENSLAFG00000006745)	KCNC2 (ENSLAFG00000031982)	ATXN7L3B (ENSLAFG00000029803)	TRHDE (ENSLAFG00000000333)	ENSLAFG00000026873
Xenarthra	ANCESTRAL SPECIES	268														ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357	ENSGT00940000162547	ENSGT00940000159670
Sloth	MODERN SPECIES	5359																E2F7 (ENSCHOG00000004785) #22
Armadillo	MODERN SPECIES	3011									ENSDNOG00000041480	ENSDNOG00000015540 #18	ENSDNOG00000031221	SYT1 (ENSDNOG00000032547) #19	NAV3 (ENSDNOG00000005668) #20	ENSDNOG00000042472	ENSDNOG00000048320	E2F7 (ENSDNOG00000001580) #22	ENSDNOG00000008785 #23	ZDHHC17 (ENSDNOG00000014749) #24	OSBPL8 (ENSDNOG00000047010) #25	BBS10 (ENSDNOG00000042628) #26	NAP1L1 (ENSDNOG00000010126)	PHLDA1 (ENSDNOG00000018745)	KRR1 (ENSDNOG00000015614)	GLIPR1 (ENSDNOG00000043370)	GLIPR1L2 (ENSDNOG00000018693)	ENSDNOG00000031956	CAPS2 (ENSDNOG00000009684)
Marsupialia	ANCESTRAL SPECIES	11	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.k	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357.b	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Marsupialia_b	ANCESTRAL SPECIES	13	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.k	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357.b	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Diprotodontia	ANCESTRAL SPECIES	8	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.k	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357.b	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Diprotodontia_a	ANCESTRAL SPECIES	8	ENSGT00940000157277	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.k	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000160727	ENSGT00940000162357.b	ENSGT00940000162547	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
koala	MODERN SPECIES	51	TMTC2 (ENSPCIG00000032378)	METTL25 (ENSPCIG00000007809)	CCDC59 (ENSPCIG00000007808) #7	PPFIA2 (ENSPCIG00000024777) #9	ACSS3 (ENSPCIG00000035215) #10	LIN7A (ENSPCIG00000029151) #11	MYF5 (ENSPCIG00000029150) #12	MYF6 (ENSPCIG00000029149) #13	PTPRQ (ENSPCIG00000029148) #14	OTOGL (ENSPCIG00000026368) #15	PPP1R12A (ENSPCIG00000026366) #17	PAWR (ENSPCIG00000026365) #18	SYT1 (ENSPCIG00000032719) #19	ENSPCIG00000026362	NAV3 (ENSPCIG00000025666) #20	E2F7 (ENSPCIG00000025823) #22	CSRP2 (ENSPCIG00000005894) #23	ZDHHC17 (ENSPCIG00000005890) #24
Common wonbat	MODERN SPECIES	1095	ACSS3 (ENSVURG00010000986) #10	LIN7A (ENSVURG00010001078) #11	MYF5 (ENSVURG00010001088) #12	MYF6 (ENSVURG00010001122) #13	PTPRQ (ENSVURG00010001162) #14	OTOGL (ENSVURG00010001281) #15	PPP1R12A (ENSVURG00010001421) #17	PAWR (ENSVURG00010001479) #18	SYT1 (ENSVURG00010001565) #19	ENSVURG00010001581	ENSVURG00010001638	NAV3 (ENSVURG00010001745) #20	ENSVURG00010001934	ENSVURG00010001942	ENSVURG00010001969	E2F7 (ENSVURG00010001992) #22	CSRP2 (ENSVURG00010002008) #23	ZDHHC17 (ENSVURG00010002037) #24	OSBPL8 (ENSVURG00010002089) #25	ENSVURG00010002140 #26	ENSVURG00010002166	ENSVURG00010002181
Wallaby	MODERN SPECIES	7268																E2F7 (ENSMEUG00000008461) #22
Tasmanian devil	MODERN SPECIES	4	METTL25 (ENSSHAG00000007147)	CCDC59 (ENSSHAG00000031706) #7	ENSSHAG00000032226	PPFIA2 (ENSSHAG00000007734) #9	ACSS3 (ENSSHAG00000005298) #10	ENSSHAG00000025569	LIN7A (ENSSHAG00000029974) #11	MYF5 (ENSSHAG00000013391) #12	MYF6 (ENSSHAG00000013331) #13	PTPRQ (ENSSHAG00000022062) #14	OTOGL (ENSSHAG00000010191) #15	PPP1R12A (ENSSHAG00000005280) #17	ENSSHAG00000022708 #18	SYT1 (ENSSHAG00000009436) #19	NAV3 (ENSSHAG00000001971) #20	E2F7 (ENSSHAG00000002919) #22	CSRP2 (ENSSHAG00000005571) #23	ZDHHC17 (ENSSHAG00000022371) #24	OSBPL8 (ENSSHAG00000023268) #25	BBS10 (ENSSHAG00000001800) #26	NAP1L1 (ENSSHAG00000002304)	ENSSHAG00000031318	KRR1 (ENSSHAG00000001646)	ENSSHAG00000000387	ENSSHAG00000003351	ENSSHAG00000022579	ENSSHAG00000003523	ENSSHAG00000001350	ENSSHAG00000024905	ENSSHAG00000032196	ENSSHAG00000023271
Opossum	MODERN SPECIES	7	METTL25 (ENSMODG00000020485)	ENSMODG00000020484 #7	ENSMODG00000020481 #9	ACSS3 (ENSMODG00000020480) #10	ENSMODG00000037278	LIN7A (ENSMODG00000020479) #11	MYF5 (ENSMODG00000020478) #12	MYF6 (ENSMODG00000039074) #13	PTPRQ (ENSMODG00000020476) #14	OTOGL (ENSMODG00000020473) #15	ENSMODG00000025012	PPP1R12A (ENSMODG00000020471) #17	PAWR (ENSMODG00000020468) #18	SYT1 (ENSMODG00000020467) #19	NAV3 (ENSMODG00000020466) #20	E2F7 (ENSMODG00000020465) #22	ENSMODG00000020464 #23	ENSMODG00000048422 #24	OSBPL8 (ENSMODG00000020459) #25	ENSMODG00000020458 #26	ENSMODG00000020456	ENSMODG00000044376	KRR1 (ENSMODG00000020451)	GLIPR1 (ENSMODG00000020450)	ENSMODG00000037882	ENSMODG00000025130	ENSMODG00000043532	ENSMODG00000020442	ENSMODG00000020440	TRHDE (ENSMODG00000020425)	TBC1D15 (ENSMODG00000020417)
Platypus	MODERN SPECIES	5	SLC6A15 (ENSOANG00000006324)	TMTC2 (ENSOANG00000015210)	ENSOANG00000004849	ENSOANG00000042867 #7	PPFIA2 (ENSOANG00000004850) #9	ACSS3 (ENSOANG00000004851) #10	ENSOANG00000041857 #11	MYF5 (ENSOANG00000004853) #12	MYF6 (ENSOANG00000004854) #13	PTPRQ (ENSOANG00000004855) #14	OTOGL (ENSOANG00000004859) #15	PPP1R12A (ENSOANG00000001685) #17	PAWR (ENSOANG00000043356) #18	SYT1 (ENSOANG00000007531) #19	NAV3 (ENSOANG00000007451) #20	E2F7 (ENSOANG00000007450) #22	CSRP2 (ENSOANG00000007447) #23	ZDHHC17 (ENSOANG00000047613) #24	OSBPL8 (ENSOANG00000011301) #25	ENSOANG00000037830 #26	ENSOANG00000004688	ENSOANG00000047378	KRR1 (ENSOANG00000014451)	ENSOANG00000012140	ENSOANG00000022184	CAPS2 (ENSOANG00000029950)	ENSOANG00000000183	TRHDE (ENSOANG00000012281)	ENSOANG00000040551	TPH2 (ENSOANG00000012279)	TBC1D15 (ENSOANG00000014716)
Sauria	ANCESTRAL SPECIES	4	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b
Lepidosauria	ANCESTRAL SPECIES	3	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000171110	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b
Episquamata	ANCESTRAL SPECIES	3	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000166459.B	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Laterata	ANCESTRAL SPECIES	6	ENSGT00390000006546 #7	ENSGT01040000241648	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000166459.B.e	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429	ENSGT00940000156786
Common wall lizard	MODERN SPECIES	1	ENSPMRG00000021433	PPFIA2 (ENSPMRG00000019499) #9	ACSS3 (ENSPMRG00000019167) #10	LIN7A (ENSPMRG00000019147) #11	MYF5 (ENSPMRG00000019143) #12	MYF6 (ENSPMRG00000019140) #13	PTPRQ (ENSPMRG00000019053) #14	ENSPMRG00000019031	OTOGL (ENSPMRG00000018808) #15	ENSPMRG00000018768	ENSPMRG00000018764	PPP1R12A (ENSPMRG00000018742) #17	PAWR (ENSPMRG00000018731) #18	SYT1 (ENSPMRG00000018726) #19	NAV3 (ENSPMRG00000018638) #20	E2F7 (ENSPMRG00000018546) #22	CSRP2 (ENSPMRG00000018535) #23	ENSPMRG00000018530	ZDHHC17 (ENSPMRG00000018520) #24	OSBPL8 (ENSPMRG00000018504) #25	NAP1L1 (ENSPMRG00000018484)	PHLDA1 (ENSPMRG00000018474)	KRR1 (ENSPMRG00000018460)	ENSPMRG00000018446	ENSPMRG00000018434	ENSPMRG00000018418	ENSPMRG00000018408	ENSPMRG00000018404	CAPS2 (ENSPMRG00000018391)	KCNC2 (ENSPMRG00000018386)	ENSPMRG00000018381
Argentine black and white tegu	MODERN SPECIES	6	ENSSMRG00000010304	PPFIA2 (ENSSMRG00000010302) #9	ACSS3 (ENSSMRG00000010292) #10	LIN7A (ENSSMRG00000010290) #11	MYF5 (ENSSMRG00000010286) #12	MYF6 (ENSSMRG00000010285) #13	PTPRQ (ENSSMRG00000010276) #14	ENSSMRG00000010275	ENSSMRG00000010274	OTOGL (ENSSMRG00000010267) #15	RPS16 (ENSSMRG00000010263)	PPP1R12A (ENSSMRG00000010257) #17	PAWR (ENSSMRG00000010238) #18	SYT1 (ENSSMRG00000010234) #19	NAV3 (ENSSMRG00000002199) #20	E2F7 (ENSSMRG00000002156) #22	CSRP2 (ENSSMRG00000002146) #23	ZDHHC17 (ENSSMRG00000002140) #24	OSBPL8 (ENSSMRG00000002083) #25	NAP1L1 (ENSSMRG00000001927)	PHLDA1 (ENSSMRG00000001842)	KRR1 (ENSSMRG00000001818)	ENSSMRG00000001816	ENSSMRG00000001811	ENSSMRG00000001806	CAPS2 (ENSSMRG00000001794)	KCNC2 (ENSSMRG00000001695)
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000166459.B	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Elapidae	ANCESTRAL SPECIES	6	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b.f.a #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A.b	ENSGT00940000166459.B	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429	ENSGT00940000156786
Elapidae_a	ANCESTRAL SPECIES	1	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b.f.a #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A.a	ENSGT00940000166459.A.b	ENSGT00940000166459.B	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b
Acanthophiinae	ANCESTRAL SPECIES		ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b.f.a #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A.b	ENSGT00940000166459.B	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Mainland tiger snake	MODERN SPECIES	20	PPFIA2 (ENSNSUG00000000679) #9	ACSS3 (ENSNSUG00000000722) #10	LIN7A (ENSNSUG00000000879) #11	MYF5 (ENSNSUG00000000881) #12	MYF6 (ENSNSUG00000000885) #13	PTPRQ (ENSNSUG00000000888) #14	ENSNSUG00000000905	OTOGL (ENSNSUG00000000909) #15	ENSNSUG00000000966	ENSNSUG00000000970	PPP1R12A (ENSNSUG00000000977) #17	PAWR (ENSNSUG00000001717) #18	SYT1 (ENSNSUG00000001720) #19	NAV3 (ENSNSUG00000001737) #20	ENSNSUG00000001751	E2F7 (ENSNSUG00000001756) #22	CSRP2 (ENSNSUG00000001781) #23	ZDHHC17 (ENSNSUG00000001783) #24	ENSNSUG00000001793	NAP1L1 (ENSNSUG00000001802)	PHLDA1 (ENSNSUG00000002091)	KRR1 (ENSNSUG00000002095)	ENSNSUG00000002098	ENSNSUG00000002101	ENSNSUG00000002104	ENSNSUG00000002108	KCNC2 (ENSNSUG00000002111)	TRHDE (ENSNSUG00000002194)	ENSNSUG00000002197	TPH2 (ENSNSUG00000002199)	TBC1D15 (ENSNSUG00000002205)
Eastern brown snake	MODERN SPECIES		METTL25 (ENSPTXG00000007317)	CCDC59 (ENSPTXG00000007319) #7	PPFIA2 (ENSPTXG00000007321) #9	ACSS3 (ENSPTXG00000007330) #10	LIN7A (ENSPTXG00000007335) #11	MYF5 (ENSPTXG00000007338) #12	MYF6 (ENSPTXG00000007339) #13	PTPRQ (ENSPTXG00000007341) #14	ENSPTXG00000007343	OTOGL (ENSPTXG00000007346) #15	RPS16 (ENSPTXG00000007353)	PPP1R12A (ENSPTXG00000007355) #17	PAWR (ENSPTXG00000007356) #18	SYT1 (ENSPTXG00000007357) #19	NAV3 (ENSPTXG00000007360) #20	E2F7 (ENSPTXG00000007372) #22	CSRP2 (ENSPTXG00000007374) #23	ZDHHC17 (ENSPTXG00000007375) #24	OSBPL8 (ENSPTXG00000007376) #25	ENSPTXG00000007380	NAP1L1 (ENSPTXG00000007381)	PHLDA1 (ENSPTXG00000007382)	KRR1 (ENSPTXG00000007383)	ENSPTXG00000007385	ENSPTXG00000007387	ENSPTXG00000007389	CAPS2 (ENSPTXG00000007392)	TRHDE (ENSPTXG00000007394)	ENSPTXG00000007395	RAB21 (ENSPTXG00000007396)	TMEM19 (ENSPTXG00000007397)
Blue-lipped sea krait	MODERN SPECIES	8564																E2F7 (ENSLLTG00000011861) #22
Indian cobra	MODERN SPECIES	6	METTL25 (ENSNNAG00000012065)	CCDC59 (ENSNNAG00000012004) #7	PPFIA2 (ENSNNAG00000011658) #9	ACSS3 (ENSNNAG00000011558) #10	LIN7A (ENSNNAG00000011463) #11	MYF5 (ENSNNAG00000011436) #12	MYF6 (ENSNNAG00000011423) #13	PTPRQ (ENSNNAG00000011257) #14	ENSNNAG00000011195	OTOGL (ENSNNAG00000010528) #15	RPS16 (ENSNNAG00000010459)	PPP1R12A (ENSNNAG00000007491) #17	PAWR (ENSNNAG00000007341) #18	SYT1 (ENSNNAG00000007300) #19	NAV3 (ENSNNAG00000007065) #20	E2F7 (ENSNNAG00000006676) #22	CSRP2 (ENSNNAG00000006626) #23	ZDHHC17 (ENSNNAG00000006609) #24	OSBPL8 (ENSNNAG00000006212) #25	NAP1L1 (ENSNNAG00000006156)	PHLDA1 (ENSNNAG00000006109)	ENSNNAG00000006093	ENSNNAG00000006071	KRR1 (ENSNNAG00000005951)	ENSNNAG00000005878	ENSNNAG00000005851	CAPS2 (ENSNNAG00000005778)	KCNC2 (ENSNNAG00000005744)	TRHDE (ENSNNAG00000005672)	TPH2 (ENSNNAG00000005600)	TBC1D15 (ENSNNAG00000005508)
Lizard	MODERN SPECIES	4	LIN54 (ENSACAG00000010548)	ENSACAG00000037629	ENSACAG00000037011	SEC31A (ENSACAG00000010481)	ENSACAG00000041939	TMEM150C (ENSACAG00000043889)	ENOPH1 (ENSACAG00000010419)	HNRNPDL (ENSACAG00000010416)	HNRNPD (ENSACAG00000010342)	ENSACAG00000041319	RASGEF1B (ENSACAG00000010279)	PRKG2 (ENSACAG00000010172)	ENSACAG00000010162	NAV3 (ENSACAG00000014617) #20	ENSACAG00000036618	E2F7 (ENSACAG00000005414) #22	ZDHHC17 (ENSACAG00000006696) #24	CSRP2 (ENSACAG00000037715) #23	ENSACAG00000038391	OSBPL8 (ENSACAG00000006790) #25	PHLDA1 (ENSACAG00000037036)	NAP1L1 (ENSACAG00000006924)	KRR1 (ENSACAG00000007788)	ENSACAG00000007763	ENSACAG00000007749	ENSACAG00000041706	ENSACAG00000007743	ENSACAG00000029585	ENSACAG00000040000	ENSACAG00000029340	CAPS2 (ENSACAG00000007716)
tuatara	MODERN SPECIES	1779				PPFIA2 (ENSSPUG00000006051) #9	ACSS3 (ENSSPUG00000006460) #10	ENSSPUG00000006572 #11	ENSSPUG00000006578 #11	MYF6 (ENSSPUG00000006611) #13	PTPRQ (ENSSPUG00000006635) #14	OTOGL (ENSSPUG00000006721) #15	RPS16 (ENSSPUG00000006832)	PPP1R12A (ENSSPUG00000006848) #17	PAWR (ENSSPUG00000006881) #18	SYT1 (ENSSPUG00000006892) #19	NAV3 (ENSSPUG00000006945) #20	E2F7 (ENSSPUG00000007017) #22	CSRP2 (ENSSPUG00000007078) #23	ZDHHC17 (ENSSPUG00000007115) #24	OSBPL8 (ENSSPUG00000007161) #25	BBS10 (ENSSPUG00000007433) #26	NAP1L1 (ENSSPUG00000007452)	PHLDA1 (ENSSPUG00000007502)	ENSSPUG00000007507	KRR1 (ENSSPUG00000007513)	ENSSPUG00000007522	ENSSPUG00000007528	ENSSPUG00000007534	CAPS2 (ENSSPUG00000007542)
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878
Archosauria	ANCESTRAL SPECIES	4	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878
Aves	ANCESTRAL SPECIES	1	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878
Neognathae	ANCESTRAL SPECIES	3	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878
Neognathae_c	ANCESTRAL SPECIES		ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878
Golden eagle	MODERN SPECIES	18	CCDC59 (ENSACCG00020010109) #7	ENSACCG00020010123	PPFIA2 (ENSACCG00020010168) #9	ACSS3 (ENSACCG00020010468) #10	LIN7A (ENSACCG00020010701) #11	MYF5 (ENSACCG00020010710) #12	MYF6 (ENSACCG00020010717) #13	PTPRQ (ENSACCG00020010748) #14	ENSACCG00020010786	OTOGL (ENSACCG00020010835) #15	RPS16 (ENSACCG00020010874)	PPP1R12A (ENSACCG00020010939) #17	PAWR (ENSACCG00020011015) #18	SYT1 (ENSACCG00020011033) #19	NAV3 (ENSACCG00020011091) #20	E2F7 (ENSACCG00020011147) #22	CSRP2 (ENSACCG00020011176) #23	ZDHHC17 (ENSACCG00020011189) #24	OSBPL8 (ENSACCG00020011213) #25	BBS10 (ENSACCG00020011231) #26	NAP1L1 (ENSACCG00020011243)	PHLDA1 (ENSACCG00020011262)	KRR1 (ENSACCG00020011277)	ENSACCG00020011291	ENSACCG00020011297	ENSACCG00020011312	ENSACCG00020011320	ENSACCG00020011333	KCNC2 (ENSACCG00020011347)	TRHDE (ENSACCG00020011378)	TPH2 (ENSACCG00020011409)
Kakapo	MODERN SPECIES	20	CCDC59 (ENSSHBG00005005147) #7	PPFIA2 (ENSSHBG00005005123) #9	ACSS3 (ENSSHBG00005005107) #10	LIN7A (ENSSHBG00005005088) #11	MYF5 (ENSSHBG00005005076) #12	MYF6 (ENSSHBG00005005072) #13	PTPRQ (ENSSHBG00005005034) #14	ENSSHBG00005004998	OTOGL (ENSSHBG00005004951) #15	RPS16 (ENSSHBG00005004902)	PPP1R12A (ENSSHBG00005004881) #17	PAWR (ENSSHBG00005004872) #18	SYT1 (ENSSHBG00005004867) #19	ENSSHBG00005004847	NAV3 (ENSSHBG00005004247) #20	E2F7 (ENSSHBG00005003861) #22	CSRP2 (ENSSHBG00005003817) #23	ZDHHC17 (ENSSHBG00005003761) #24	OSBPL8 (ENSSHBG00005003509) #25	ENSSHBG00005003428	BBS10 (ENSSHBG00005003419) #26	NAP1L1 (ENSSHBG00005003406)	PHLDA1 (ENSSHBG00005003397)	KRR1 (ENSSHBG00005003376)	ENSSHBG00005003356	ENSSHBG00005003343	ENSSHBG00005003325	ENSSHBG00005003305	CAPS2 (ENSSHBG00005003291)	KCNC2 (ENSSHBG00005003258)	TRHDE (ENSSHBG00005003220)
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Great tit	MODERN SPECIES	10	CCDC59 (ENSPMJG00000012676) #7	PPFIA2 (ENSPMJG00000012675) #9	ACSS3 (ENSPMJG00000012674) #10	LIN7A (ENSPMJG00000012673) #11	MYF5 (ENSPMJG00000012672) #12	MYF6 (ENSPMJG00000012671) #13	PTPRQ (ENSPMJG00000012670) #14	ENSPMJG00000012669	OTOGL (ENSPMJG00000012668) #15	RPS16 (ENSPMJG00000012667)	PPP1R12A (ENSPMJG00000012665) #17	PAWR (ENSPMJG00000012664) #18	ENSPMJG00000012663	SYT1 (ENSPMJG00000012662) #19	NAV3 (ENSPMJG00000012656) #20	E2F7 (ENSPMJG00000012655) #22	CSRP2 (ENSPMJG00000012654) #23	ZDHHC17 (ENSPMJG00000012653) #24	OSBPL8 (ENSPMJG00000012652) #25	NAP1L1 (ENSPMJG00000012651)	PHLDA1 (ENSPMJG00000012650)	KRR1 (ENSPMJG00000012649)	ENSPMJG00000012648	ENSPMJG00000012647	ENSPMJG00000012646	CAPS2 (ENSPMJG00000012645)	KCNC2 (ENSPMJG00000012644)	ENSPMJG00000012643	TRHDE (ENSPMJG00000012642)	TPH2 (ENSPMJG00000012641)	TBC1D15 (ENSPMJG00000012640)
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Medium ground finch	MODERN SPECIES	13		TMTC2 (ENSGFOG00000000573)	METTL25 (ENSGFOG00000000588)	CCDC59 (ENSGFOG00000000604) #7	ENSGFOG00000000855 #9	ACSS3 (ENSGFOG00000004536) #10	LIN7A (ENSGFOG00000004616) #11	MYF5 (ENSGFOG00000004624) #12	MYF6 (ENSGFOG00000004628) #13	PTPRQ (ENSGFOG00000004653) #14	OTOGL (ENSGFOG00000004777) #15	RPS16 (ENSGFOG00000004986)	PPP1R12A (ENSGFOG00000005009) #17	SYT1 (ENSGFOG00000005048) #19	NAV3 (ENSGFOG00000005066) #20	E2F7 (ENSGFOG00000005143) #22	CSRP2 (ENSGFOG00000005156) #23	ZDHHC17 (ENSGFOG00000005185) #24	OSBPL8 (ENSGFOG00000005268) #25	NAP1L1 (ENSGFOG00000005292)	KRR1 (ENSGFOG00000005331)	ENSGFOG00000005348	ENSGFOG00000005356	ENSGFOG00000005369	ENSGFOG00000005379	KCNC2 (ENSGFOG00000005392)	TRHDE (ENSGFOG00000005406)	TPH2 (ENSGFOG00000005460)	TBC1D15 (ENSGFOG00000005583)	RAB21 (ENSGFOG00000006163)	TMEM19 (ENSGFOG00000006172)
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Zebra finch	MODERN SPECIES	11	METTL25 (ENSTGUG00000007841)	CCDC59 (ENSTGUG00000007835) #7	PPFIA2 (ENSTGUG00000007778) #9	ACSS3 (ENSTGUG00000007763) #10	LIN7A (ENSTGUG00000007757) #11	MYF5 (ENSTGUG00000007755) #12	MYF6 (ENSTGUG00000007751) #13	PTPRQ (ENSTGUG00000007720) #14	ENSTGUG00000023557	OTOGL (ENSTGUG00000007680) #15	RPS16 (ENSTGUG00000007667)	PPP1R12A (ENSTGUG00000007603) #17	PAWR (ENSTGUG00000020006) #18	SYT1 (ENSTGUG00000007572) #19	NAV3 (ENSTGUG00000007519) #20	E2F7 (ENSTGUG00000007515) #22	CSRP2 (ENSTGUG00000028299) #23	ZDHHC17 (ENSTGUG00000007477) #24	OSBPL8 (ENSTGUG00000007445) #25	BBS10 (ENSTGUG00000007444) #26	NAP1L1 (ENSTGUG00000007412)	PHLDA1 (ENSTGUG00000018888)	KRR1 (ENSTGUG00000007385)	ENSTGUG00000007376	ENSTGUG00000007373	ENSTGUG00000007370	CAPS2 (ENSTGUG00000007358)	KCNC2 (ENSTGUG00000007354)	TRHDE (ENSTGUG00000026259)	TPH2 (ENSTGUG00000007300)	TBC1D15 (ENSTGUG00000007267)
Common canary	MODERN SPECIES	6	CCDC59 (ENSSCAG00000008055) #7	PPFIA2 (ENSSCAG00000008164) #9	ACSS3 (ENSSCAG00000008416) #10	LIN7A (ENSSCAG00000008443) #11	MYF5 (ENSSCAG00000008451) #12	MYF6 (ENSSCAG00000008454) #13	PTPRQ (ENSSCAG00000008462) #14	ENSSCAG00000008481	OTOGL (ENSSCAG00000008492) #15	RPS16 (ENSSCAG00000008547)	PPP1R12A (ENSSCAG00000008580) #17	PAWR (ENSSCAG00000008657) #18	SYT1 (ENSSCAG00000008697) #19	ENSSCAG00000008738 #20	ENSSCAG00000008755 #20	E2F7 (ENSSCAG00000008773) #22	CSRP2 (ENSSCAG00000008783) #23	ZDHHC17 (ENSSCAG00000008792) #24	OSBPL8 (ENSSCAG00000008836) #25	NAP1L1 (ENSSCAG00000008861)	PHLDA1 (ENSSCAG00000008868)	KRR1 (ENSSCAG00000008870)	ENSSCAG00000008874	ENSSCAG00000008881	ENSSCAG00000008887	ENSSCAG00000008897	KCNC2 (ENSSCAG00000008902)	TRHDE (ENSSCAG00000008927)	TPH2 (ENSSCAG00000008941)	TBC1D15 (ENSSCAG00000008954)	RAB21 (ENSSCAG00000008962)
Flycatcher	MODERN SPECIES	10	TMTC2 (ENSFALG00000010537)	METTL25 (ENSFALG00000010529)	CCDC59 (ENSFALG00000010525) #7	PPFIA2 (ENSFALG00000010521) #9	ACSS3 (ENSFALG00000010517) #10	LIN7A (ENSFALG00000010511) #11	MYF5 (ENSFALG00000010507) #12	MYF6 (ENSFALG00000010503) #13	PTPRQ (ENSFALG00000010498) #14	ENSFALG00000026391	OTOGL (ENSFALG00000010495) #15	ENSFALG00000028909	PPP1R12A (ENSFALG00000010487) #17	SYT1 (ENSFALG00000010476) #19	NAV3 (ENSFALG00000010449) #20	E2F7 (ENSFALG00000010433) #22	CSRP2 (ENSFALG00000010426) #23	ZDHHC17 (ENSFALG00000010415) #24	OSBPL8 (ENSFALG00000010404) #25	NAP1L1 (ENSFALG00000010403)	PHLDA1 (ENSFALG00000014745)	KRR1 (ENSFALG00000010395)	ENSFALG00000010390	ENSFALG00000010384	ENSFALG00000029079	ENSFALG00000024791	KCNC2 (ENSFALG00000010376)	TRHDE (ENSFALG00000010372)	TPH2 (ENSFALG00000010361)	TBC1D15 (ENSFALG00000010336)	RAB21 (ENSFALG00000026065)
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b
Anatidae	ANCESTRAL SPECIES	14	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT01100000267073	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429
Pink-footed goose	MODERN SPECIES	36	RANGAP1 (ENSABRG00000004047)	CHADL (ENSABRG00000003979)	ENSABRG00000003973 ##9	ENSABRG00000003943 #10	LIN7A (ENSABRG00000003928) #11	MYF5 (ENSABRG00000003896) #12	MYF6 (ENSABRG00000003882) #13	PTPRQ (ENSABRG00000003711) #14	OTOGL (ENSABRG00000003060) #15	RPS16 (ENSABRG00000002997)	PPP1R12A (ENSABRG00000002856) #17	PAWR (ENSABRG00000002832) #18	SYT1 (ENSABRG00000002806) #19	ENSABRG00000002691	NAV3 (ENSABRG00000002539) #20	E2F7 (ENSABRG00000002456) #22	CSRP2 (ENSABRG00000002441) #23	ZDHHC17 (ENSABRG00000002383) #24	OSBPL8 (ENSABRG00000002275) #25	BBS10 (ENSABRG00000002187) #26	NAP1L1 (ENSABRG00000002153)	PHLDA1 (ENSABRG00000002143)	KRR1 (ENSABRG00000002114)	ENSABRG00000002091	ENSABRG00000002072	ENSABRG00000002061	CAPS2 (ENSABRG00000001989)	KCNC2 (ENSABRG00000001961)	TRHDE (ENSABRG00000001879)	ENSABRG00000001857	TPH2 (ENSABRG00000001821)
Duck	MODERN SPECIES		RANGAP1 (ENSAPLG00000006767)	ENSAPLG00000029393	LIN7A (ENSAPLG00000017756) #11	ENSAPLG00000001136 #11	MYF5 (ENSAPLG00000001124) #12	MYF6 (ENSAPLG00000002254) #13	PTPRQ (ENSAPLG00000016187) #14	ENSAPLG00000019979	OTOGL (ENSAPLG00000015946) #15	RPS16 (ENSAPLG00000015907)	PPP1R12A (ENSAPLG00000015197) #17	PAWR (ENSAPLG00000027740) #18	SYT1 (ENSAPLG00000014912) #19	ENSAPLG00000029309	NAV3 (ENSAPLG00000014672) #20	E2F7 (ENSAPLG00000014506) #22	ENSAPLG00000014346	ZDHHC17 (ENSAPLG00000014034) #24	OSBPL8 (ENSAPLG00000016005) #25	NAP1L1 (ENSAPLG00000016178)	PHLDA1 (ENSAPLG00000002044)	KRR1 (ENSAPLG00000016378)	ENSAPLG00000011934	ENSAPLG00000020051	CAPS2 (ENSAPLG00000011831)	KCNC2 (ENSAPLG00000008754)	TRHDE (ENSAPLG00000004571)	TPH2 (ENSAPLG00000003421)	TBC1D15 (ENSAPLG00000002695)	RAB21 (ENSAPLG00000029848)	TMEM19 (ENSAPLG00000002431)
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b
Japanese quail	MODERN SPECIES		METTL25 (ENSCJPG00005004697)	CCDC59 (ENSCJPG00005004695) #7	PPFIA2 (ENSCJPG00005001332) #9	ACSS3 (ENSCJPG00005001150) #10	LIN7A (ENSCJPG00005001112) #11	MYF5 (ENSCJPG00005001107) #12	MYF6 (ENSCJPG00005001103) #13	PTPRQ (ENSCJPG00005001013) #14	OTOGL (ENSCJPG00005000816) #15	RPS16 (ENSCJPG00005000776)	PPP1R12A (ENSCJPG00005016217) #17	PAWR (ENSCJPG00005016216) #18	SYT1 (ENSCJPG00005016211) #19	NAV3 (ENSCJPG00005016185) #20	ENSCJPG00005016175	E2F7 (ENSCJPG00005016173) #22	CSRP2 (ENSCJPG00005016171) #23	ZDHHC17 (ENSCJPG00005016170) #24	OSBPL8 (ENSCJPG00005016164) #25	BBS10 (ENSCJPG00005016163) #26	NAP1L1 (ENSCJPG00005016162)	PHLDA1 (ENSCJPG00005016153)	KRR1 (ENSCJPG00005016146)	ENSCJPG00005016145	ENSCJPG00005016144	ENSCJPG00005016143	ENSCJPG00005016141	CAPS2 (ENSCJPG00005016140)	KCNC2 (ENSCJPG00005016138)	TRHDE (ENSCJPG00005016108)	TPH2 (ENSCJPG00005016097)
Phasianidae_b	ANCESTRAL SPECIES	9	ENSGT00940000156144	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b
Chicken	MODERN SPECIES		CCDC59 (ENSGALG00010010017) #7	ENSGALG00010013569	PPFIA2 (ENSGALG00010012450) #9	ACSS3 (ENSGALG00010012337) #10	ENSGALG00010014881 #11	ENSGALG00010012271 #11	MYF5 (ENSGALG00010012264) #12	MYF6 (ENSGALG00010012253) #13	PTPRQ (ENSGALG00010012230) #14	OTOGL (ENSGALG00010013364) #15	RPS16 (ENSGALG00010013358)	PPP1R12A (ENSGALG00010013333) #17	PAWR (ENSGALG00010013283) #18	SYT1 (ENSGALG00010012026) #19	NAV3 (ENSGALG00010013648) #20	E2F7 (ENSGALG00010013538) #22	CSRP2 (ENSGALG00010013516) #23	ZDHHC17 (ENSGALG00010013476) #24	OSBPL8 (ENSGALG00010013444) #25	BBS10 (ENSGALG00010013400) #26	NAP1L1 (ENSGALG00010013389)	PHLDA1 (ENSGALG00010014238)	KRR1 (ENSGALG00010012975)	GLIPR1L (ENSGALG00010012966)	GLIPR1 (ENSGALG00010012924)	GLIPR1L1 (ENSGALG00010012907)	ENSGALG00010012899	CAPS2 (ENSGALG00010012891)	KCNC2 (ENSGALG00010012870)	TRHDE (ENSGALG00010012849)	TPH2 (ENSGALG00010012834)
Turkey	MODERN SPECIES		ENSMGAG00000011134	TSPAN19 (ENSMGAG00000017647)	SLC6A15 (ENSMGAG00000011123)	ENSMGAG00000011103 #9	ACSS3 (ENSMGAG00000011096) #10	LIN7A (ENSMGAG00000011093) #11	MYF6 (ENSMGAG00000011091) #13	ENSMGAG00000018753	PTPRQ (ENSMGAG00000011081) #14	OTOGL (ENSMGAG00000011065) #15	ENSMGAG00000011060	PPP1R12A (ENSMGAG00000011011) #17	PAWR (ENSMGAG00000011010) #18	SYT1 (ENSMGAG00000011006) #19	NAV3 (ENSMGAG00000010956) #20	E2F7 (ENSMGAG00000010943) #22	CSRP2 (ENSMGAG00000010931) #23	ZDHHC17 (ENSMGAG00000010911) #24	OSBPL8 (ENSMGAG00000010890) #25	NAP1L1 (ENSMGAG00000010858)	ENSMGAG00000010856	KRR1 (ENSMGAG00000010844)	ENSMGAG00000010839	ENSMGAG00000010833	ENSMGAG00000010832	ENSMGAG00000010827	CAPS2 (ENSMGAG00000010816)	KCNC2 (ENSMGAG00000010812)	TRHDE (ENSMGAG00000010787)	TPH2 (ENSMGAG00000010781)	TBC1D15 (ENSMGAG00000010741)
African ostrich	MODERN SPECIES	426	TMTC2 (ENSSCUG00000008949)	METTL25 (ENSSCUG00000008954)	CCDC59 (ENSSCUG00000008956) #7	PPFIA2 (ENSSCUG00000008966) #9	ACSS3 (ENSSCUG00000008985) #10	LIN7A (ENSSCUG00000008995) #11	ENSSCUG00000008997 #11	MYF6 (ENSSCUG00000008999) #13	PTPRQ (ENSSCUG00000009002) #14	OTOGL (ENSSCUG00000009047) #15	RPS16 (ENSSCUG00000009078)	PPP1R12A (ENSSCUG00000009087) #17	SYT1 (ENSSCUG00000009090) #19	NAV3 (ENSSCUG00000009108) #20	ENSSCUG00000009143	E2F7 (ENSSCUG00000009145) #22	CSRP2 (ENSSCUG00000009147) #23	ZDHHC17 (ENSSCUG00000009151) #24	OSBPL8 (ENSSCUG00000009164) #25	NAP1L1 (ENSSCUG00000009180)	KRR1 (ENSSCUG00000009184)	ENSSCUG00000009187	ENSSCUG00000009190	ENSSCUG00000009192	ENSSCUG00000009194	CAPS2 (ENSSCUG00000009195)	KCNC2 (ENSSCUG00000009197)	TRHDE (ENSSCUG00000009206)	TPH2 (ENSSCUG00000009230)	TBC1D15 (ENSSCUG00000009266)	RAB21 (ENSSCUG00000009312)
Australian saltwater crocodile	MODERN SPECIES	49	PPFIA2 (ENSCPRG00005003178) #9	ACSS3 (ENSCPRG00005003271) #10	LIN7A (ENSCPRG00005003468) #11	ENSCPRG00005003470 #11	MYF5 (ENSCPRG00005003473) #12	MYF6 (ENSCPRG00005003486) #13	PTPRQ (ENSCPRG00005003495) #14	ENSCPRG00005003525	OTOGL (ENSCPRG00005003554) #15	RPS16 (ENSCPRG00005003696)	PPP1R12A (ENSCPRG00005003724) #17	PAWR (ENSCPRG00005003774) #18	SYT1 (ENSCPRG00005003800) #19	NAV3 (ENSCPRG00005004050) #20	ENSCPRG00005005917	E2F7 (ENSCPRG00005005958) #22	CSRP2 (ENSCPRG00005005963) #23	ZDHHC17 (ENSCPRG00005006020) #24	OSBPL8 (ENSCPRG00005006069) #25	BBS10 (ENSCPRG00005006087) #26	NAP1L1 (ENSCPRG00005006105)	PHLDA1 (ENSCPRG00005006137)	KRR1 (ENSCPRG00005006167)	ENSCPRG00005006174	ENSCPRG00005006177	ENSCPRG00005006179	ENSCPRG00005006183	CAPS2 (ENSCPRG00005006189)	KCNC2 (ENSCPRG00005006250)	TRHDE (ENSCPRG00005006331)	TPH2 (ENSCPRG00005006354)
Cryptodira	ANCESTRAL SPECIES	11	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000160727	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371
Testudinoidea	DUPLICATION
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713.v #22	ENSGT00940000157713.u #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000160727	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371
Emydidae	ANCESTRAL SPECIES	10	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713.v #22	ENSGT00940000157713.u #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000160727	ENSGT00440000034107.b	ENSGT00940000159670	ENSGT00940000157371
painted turtle	MODERN SPECIES	2420														NAV3 (ENSCPBG00000017880) #20	PMS2 (ENSCPBG00000017946)	E2F7 (ENSCPBG00000018079) #22	CSRP2 (ENSCPBG00000018081) #23	ZDHHC17 (ENSCPBG00000018083) #24	OSBPL8 (ENSCPBG00000018089) #25	BBS10 (ENSCPBG00000018096) #26	NAP1L1 (ENSCPBG00000018098)	PHLDA1 (ENSCPBG00000018103)	KRR1 (ENSCPBG00000018105)	ENSCPBG00000018107	GLIPR1 (ENSCPBG00000018108)	ENSCPBG00000018109	ENSCPBG00000018110	CAPS2 (ENSCPBG00000018113)	KCNC2 (ENSCPBG00000018114)
Three-toed box turtle	MODERN SPECIES	28	ENSTMTG00000000306 #9	ENSTMTG00000000244 #9	ACSS3 (ENSTMTG00000000183) #10	LIN7A (ENSTMTG00000000157) #11	ENSTMTG00000000099 #11	MYF5 (ENSTMTG00000000077) #12	MYF6 (ENSTMTG00000018967) #13	PTPRQ (ENSTMTG00000018868) #14	OTOGL (ENSTMTG00000018509) #15	RPS16 (ENSTMTG00000018474)	PPP1R12A (ENSTMTG00000018415) #17	PAWR (ENSTMTG00000018399) #18	SYT1 (ENSTMTG00000018366) #19	NAV3 (ENSTMTG00000018146) #20	ENSTMTG00000018124 #22	ENSTMTG00000018112 #22	CSRP2 (ENSTMTG00000018107) #23	ZDHHC17 (ENSTMTG00000018059) #24	OSBPL8 (ENSTMTG00000018028) #25	BBS10 (ENSTMTG00000017983) #26	NAP1L1 (ENSTMTG00000017966)	PHLDA1 (ENSTMTG00000017953)	KRR1 (ENSTMTG00000017936)	ENSTMTG00000017924	ENSTMTG00000017909	ENSTMTG00000017897	ENSTMTG00000017887	CAPS2 (ENSTMTG00000017868)	KCNC2 (ENSTMTG00000017857)	TRHDE (ENSTMTG00000017809)	TPH2 (ENSTMTG00000017763)
Testudinidae	ANCESTRAL SPECIES	12	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713.v #22	ENSGT00940000157713.u #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	174															ENSCABG00000017714 #22	ENSCABG00000017712 #22	CSRP2 (ENSCABG00000017635) #23	ZDHHC17 (ENSCABG00000017622) #24	ENSCABG00000017559	ANXA1 (ENSCABG00000017367)	RORB (ENSCABG00000017351)	TRPM6 (ENSCABG00000017252)
Abingdon island giant tortoise	MODERN SPECIES	174																ENSCABG00000017714 #22	ENSCABG00000017712 #22	CSRP2 (ENSCABG00000017635) #23	ZDHHC17 (ENSCABG00000017622) #24	ENSCABG00000017559	ANXA1 (ENSCABG00000017367)	RORB (ENSCABG00000017351)	TRPM6 (ENSCABG00000017252)
Goode s thornscrub tortoise	MODERN SPECIES		METTL25 (ENSGEVG00005006938)	CCDC59 (ENSGEVG00005006965) #7	PPFIA2 (ENSGEVG00005007013) #9	ACSS3 (ENSGEVG00005007236) #10	LIN7A (ENSGEVG00005007306) #11	MYF5 (ENSGEVG00005007350) #12	MYF6 (ENSGEVG00005007365) #13	PTPRQ (ENSGEVG00005007409) #14	OTOGL (ENSGEVG00005007663) #15	RPS16 (ENSGEVG00005008158)	PPP1R12A (ENSGEVG00005008199) #17	PAWR (ENSGEVG00005008262) #18	SYT1 (ENSGEVG00005008297) #19	NAV3 (ENSGEVG00005008397) #20	ENSGEVG00005008646 #22	ENSGEVG00005008668 #22	CSRP2 (ENSGEVG00005008707) #23	ZDHHC17 (ENSGEVG00005008730) #24	OSBPL8 (ENSGEVG00005008789) #25	BBS10 (ENSGEVG00005008898) #26	NAP1L1 (ENSGEVG00005000012)	PHLDA1 (ENSGEVG00005000018)	KRR1 (ENSGEVG00005000023)	ENSGEVG00005000031	ENSGEVG00005000043	GLIPR1 (ENSGEVG00005000064)	ENSGEVG00005000074	CAPS2 (ENSGEVG00005000103)	KCNC2 (ENSGEVG00005000127)	TRHDE (ENSGEVG00005000157)	TPH2 (ENSGEVG00005000195)
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713.v #22	ENSGT00940000157713.u #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000160727	ENSGT00440000034107.b	ENSGT00940000159670
Testudinidae	ANCESTRAL SPECIES	12	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713.v #22	ENSGT00940000157713.u #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878
Goode s thornscrub tortoise	MODERN SPECIES		TMTC2 (ENSGEVG00005006853)	METTL25 (ENSGEVG00005006938)	CCDC59 (ENSGEVG00005006965) #7	PPFIA2 (ENSGEVG00005007013) #9	ACSS3 (ENSGEVG00005007236) #10	LIN7A (ENSGEVG00005007306) #11	MYF5 (ENSGEVG00005007350) #12	MYF6 (ENSGEVG00005007365) #13	PTPRQ (ENSGEVG00005007409) #14	OTOGL (ENSGEVG00005007663) #15	RPS16 (ENSGEVG00005008158)	PPP1R12A (ENSGEVG00005008199) #17	PAWR (ENSGEVG00005008262) #18	SYT1 (ENSGEVG00005008297) #19	NAV3 (ENSGEVG00005008397) #20	ENSGEVG00005008646 #22	ENSGEVG00005008668 #22	CSRP2 (ENSGEVG00005008707) #23	ZDHHC17 (ENSGEVG00005008730) #24	OSBPL8 (ENSGEVG00005008789) #25	BBS10 (ENSGEVG00005008898) #26	NAP1L1 (ENSGEVG00005000012)	PHLDA1 (ENSGEVG00005000018)	KRR1 (ENSGEVG00005000023)	ENSGEVG00005000031	ENSGEVG00005000043	GLIPR1 (ENSGEVG00005000064)	ENSGEVG00005000074	CAPS2 (ENSGEVG00005000103)	KCNC2 (ENSGEVG00005000127)	TRHDE (ENSGEVG00005000157)
Emydidae	ANCESTRAL SPECIES	10	ENSGT00530000063745.b	ENSGT00390000006546 #7	ENSGT01050000244900.a.a.a.a.b #9	ENSGT00940000157479 #10	ENSGT00940000153222.a.a #11	ENSGT00950000182959.a.a #12	ENSGT00950000182959.a.b.b.a #13	ENSGT00940000159215 #14	ENSGT00960000187527	ENSGT00940000160698 #15	ENSGT00390000013067	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713.v #22	ENSGT00940000157713.u #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000160727	ENSGT00440000034107.b	ENSGT00940000159670
Three-toed box turtle	MODERN SPECIES	28	CCDC59 (ENSTMTG00000000341) #7	ENSTMTG00000000306 #9	ENSTMTG00000000244 #9	ACSS3 (ENSTMTG00000000183) #10	LIN7A (ENSTMTG00000000157) #11	ENSTMTG00000000099 #11	MYF5 (ENSTMTG00000000077) #12	MYF6 (ENSTMTG00000018967) #13	PTPRQ (ENSTMTG00000018868) #14	OTOGL (ENSTMTG00000018509) #15	RPS16 (ENSTMTG00000018474)	PPP1R12A (ENSTMTG00000018415) #17	PAWR (ENSTMTG00000018399) #18	SYT1 (ENSTMTG00000018366) #19	NAV3 (ENSTMTG00000018146) #20	ENSTMTG00000018124 #22	ENSTMTG00000018112 #22	CSRP2 (ENSTMTG00000018107) #23	ZDHHC17 (ENSTMTG00000018059) #24	OSBPL8 (ENSTMTG00000018028) #25	BBS10 (ENSTMTG00000017983) #26	NAP1L1 (ENSTMTG00000017966)	PHLDA1 (ENSTMTG00000017953)	KRR1 (ENSTMTG00000017936)	ENSTMTG00000017924	ENSTMTG00000017909	ENSTMTG00000017897	ENSTMTG00000017887	CAPS2 (ENSTMTG00000017868)	KCNC2 (ENSTMTG00000017857)	TRHDE (ENSTMTG00000017809)
Chinese turtle	MODERN SPECIES	718	TMTC2 (ENSPSIG00000006034)	METTL25 (ENSPSIG00000007019)	PPFIA2 (ENSPSIG00000007454) #9	ACSS3 (ENSPSIG00000009322) #10	LIN7A (ENSPSIG00000011871) #11	MYF5 (ENSPSIG00000012000) #12	MYF6 (ENSPSIG00000012468) #13	ENSPSIG00000013550	OTOGL (ENSPSIG00000014034) #15	ENSPSIG00000016823	ENSPSIG00000016930	PPP1R12A (ENSPSIG00000017200) #17	PAWR (ENSPSIG00000007487) #18	SYT1 (ENSPSIG00000007501) #19	NAV3 (ENSPSIG00000009060) #20	E2F7 (ENSPSIG00000012629) #22	CSRP2 (ENSPSIG00000012637) #23	ZDHHC17 (ENSPSIG00000012905) #24	ENSPSIG00000001298
Anura	ANCESTRAL SPECIES	24	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000160716	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000156749	ENSGT00390000010948	ENSGT00940000157098	ENSGT00940000157309	ENSGT00940000161214	ENSGT00940000154932.A	ENSGT00940000156120.a #17	ENSGT00390000000406 #18	ENSGT00940000155394 #19	ENSGT00940000158014 #20	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a	ENSGT00440000039564.b	ENSGT00390000018775	ENSGT00940000165467	ENSGT00940000159670	ENSGT00940000157371	ENSGT00940000155878	ENSGT00950000182885.A.b	ENSGT00940000156429	ENSGT00940000156786	ENSGT00390000017998
Frog	MODERN SPECIES	3	ENSXETG00000042608	ENSXETG00000032882	rpap3 (ENSXETG00000014674)	atp23 (ENSXETG00000014677)	lrig3 (ENSXETG00000021481)	slc16a7 (ENSXETG00000021479)	ENSXETG00000035432	ENSXETG00000043063	ENSXETG00000046348	tafa2 (ENSXETG00000038846)	usp15 (ENSXETG00000021472)	ppp1r12a (ENSXETG00000021468) #17	pawr (ENSXETG00000004074) #18	syt1 (ENSXETG00000004068) #19	nav3 (ENSXETG00000014323) #20	e2f7 (ENSXETG00000014320) #22	csrp2 (ENSXETG00000014318) #23	zdhhc17 (ENSXETG00000014315) #24	ENSXETG00000046768	osbpl8 (ENSXETG00000013334) #25	ENSXETG00000047866	bbs10 (ENSXETG00000031389) #26	nap1l1 (ENSXETG00000013323)	phlda1 (ENSXETG00000013321)	ENSXETG00000046760	krr1 (ENSXETG00000013312)	ENSXETG00000043158	ccdc107 (ENSXETG00000030850)	CAPS2 (ENSXETG00000032225)	kcnc2 (ENSXETG00000032745)	ENSXETG00000043992
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000029332	PTPRB (ENSLLEG00000029389)	PTPRR (ENSLLEG00000029638)	ENSLLEG00000029670	ENSLLEG00000004652	TSPAN8 (ENSLLEG00000004690)	ENSLLEG00000004700	ENSLLEG00000004706	LGR5 (ENSLLEG00000004723)	ZFC3H1 (ENSLLEG00000004747)	TMEM19 (ENSLLEG00000004833)	RAB21 (ENSLLEG00000004844)	TBC1D15 (ENSLLEG00000004867)	SCUBE1 (ENSLLEG00000004904)	ENSLLEG00000004936	E2F7 (ENSLLEG00000004947) #22	CSRP2 (ENSLLEG00000004972) #23	ZDHHC17 (ENSLLEG00000005022) #24	OSBPL8 (ENSLLEG00000005208) #25	BBS10 (ENSLLEG00000005343) #26	ENSLLEG00000005358	ENSLLEG00000005436	PHLDA1 (ENSLLEG00000006026)	ENSLLEG00000006041	KRR1 (ENSLLEG00000006073)	ENSLLEG00000006302	CAPS2 (ENSLLEG00000006381)	ENSLLEG00000006706	ENSLLEG00000006729	ENSLLEG00000006750	ENSLLEG00000006766