Sarcopterygii	ANCESTRAL SPECIES	8	ENSGT00390000006546 #10	ENSGT00660000096975	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00390000002417 #26	ENSGT00940000166459.A	ENSGT00940000165853	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Tetrapoda	ANCESTRAL SPECIES	5	ENSGT00390000006546 #10	ENSGT00660000096975	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000166459.A	ENSGT00940000165853	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Amniota	ANCESTRAL SPECIES	5	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000166459.A	ENSGT00940000165853	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37
Mammalia	ANCESTRAL SPECIES	8	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Theria	ANCESTRAL SPECIES	2	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Glires	ANCESTRAL SPECIES	4	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Murinae	ANCESTRAL SPECIES	22	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Mus	ANCESTRAL SPECIES	23	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00900000143684 #36	ENSGT00940000155878 #37
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162547.i.a #31	ENSGT00940000162357 #32	ENSGT00940000162547.i.b ##31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00900000143684 #36
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162547.i.a #31	ENSGT00940000162357 #32	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00900000143684 #36	ENSGT00940000155878 #37
spretus	MODERN SPECIES	1	Slc6a15 (MGP_SPRETEiJ_G0016600) #7	Tmtc2 (MGP_SPRETEiJ_G0016601) #8	Mettl25 (MGP_SPRETEiJ_G0016602) #9	Ccdc59 (MGP_SPRETEiJ_G0016603) #10	Ppfia2 (MGP_SPRETEiJ_G0016604) #11	Acss3 (MGP_SPRETEiJ_G0016605) #12	Lin7a (MGP_SPRETEiJ_G0016606) #13	Myf5 (MGP_SPRETEiJ_G0016607) #14	Myf6 (MGP_SPRETEiJ_G0016608) #15	Ptprq (MGP_SPRETEiJ_G0016609) #16	Otogl (MGP_SPRETEiJ_G0016610) #17	Ppp1r12a (MGP_SPRETEiJ_G0016611) #18	Pawr (MGP_SPRETEiJ_G0016612) #19	Syt1 (MGP_SPRETEiJ_G0016613) #20	Nav3 (MGP_SPRETEiJ_G0016614) #21	E2f7 (MGP_SPRETEiJ_G0016615) #22	Csrp2 (MGP_SPRETEiJ_G0016616) #23	Zdhhc17 (MGP_SPRETEiJ_G0016617) #24	Osbpl8 (MGP_SPRETEiJ_G0016618) #25	Bbs10 (MGP_SPRETEiJ_G0016619) #26	Nap1l1 (MGP_SPRETEiJ_G0016620) #27	Phlda1 (MGP_SPRETEiJ_G0016621) #28	Krr1 (MGP_SPRETEiJ_G0016622) #29	Glipr1 (MGP_SPRETEiJ_G0016623) #30	MGP_SPRETEiJ_G0016624 #31	MGP_SPRETEiJ_G0016625 #32	MGP_SPRETEiJ_G0016626 #33	Kcnc2 (MGP_SPRETEiJ_G0016627) #34	Atxn7l3b (MGP_SPRETEiJ_G0016628) #35	MGP_SPRETEiJ_G0016629 #36	Trhde (MGP_SPRETEiJ_G0016630) #37
Steppe mouse	MODERN SPECIES	2517																E2f7 (ENSMSIG00000004948) #22	Csrp2 (ENSMSIG00000004873) #23	Zdhhc17 (ENSMSIG00000004833) #24
Mouse	MODERN SPECIES	1	Tmtc2 (ENSMUSG00000036019) #8	Mettl25 (ENSMUSG00000036009) #9	Ccdc59 (ENSMUSG00000019897) #10	Ppfia2 (ENSMUSG00000053825) #11	Acss3 (ENSMUSG00000035948) #12	Lin7a (ENSMUSG00000019906) #13	Myf5 (ENSMUSG00000000435) #14	Myf6 (ENSMUSG00000035923) #15	Ptprq (ENSMUSG00000035916) #16	Otogl (ENSMUSG00000091455) #17	Ppp1r12a (ENSMUSG00000019907) #18	Pawr (ENSMUSG00000035873) #19	Syt1 (ENSMUSG00000035864) #20	Brcc3dc (ENSMUSG00000112039)	Nav3 (ENSMUSG00000020181) #21	E2f7 (ENSMUSG00000020185) #22	Csrp2 (ENSMUSG00000020186) #23	Zdhhc17 (ENSMUSG00000035798) #24	Osbpl8 (ENSMUSG00000020189) #25	Bbs10 (ENSMUSG00000035759) #26	Nap1l1 (ENSMUSG00000058799) #27	Phlda1 (ENSMUSG00000020205) #28	Krr1 (ENSMUSG00000063334) #29	Glipr1 (ENSMUSG00000056888) #30	Glipr1l1 (ENSMUSG00000020213) #31	Glipr1l2 (ENSMUSG00000020214) #32	Glipr1l3 (ENSMUSG00000112611) ##31	Caps2 (ENSMUSG00000035694) #33	Kcnc2 (ENSMUSG00000035681) #34	Atxn7l3b (ENSMUSG00000074748) #35	Trhde (ENSMUSG00000050663) #37
Ryukyu mouse	MODERN SPECIES	1	Slc6a15 (MGP_CAROLIEiJ_G0015778) #7	Tmtc2 (MGP_CAROLIEiJ_G0015779) #8	Mettl25 (MGP_CAROLIEiJ_G0015780) #9	Ccdc59 (MGP_CAROLIEiJ_G0015781) #10	Ppfia2 (MGP_CAROLIEiJ_G0015782) #11	Acss3 (MGP_CAROLIEiJ_G0015783) #12	Lin7a (MGP_CAROLIEiJ_G0015784) #13	Myf5 (MGP_CAROLIEiJ_G0015785) #14	Myf6 (MGP_CAROLIEiJ_G0015786) #15	Ptprq (MGP_CAROLIEiJ_G0015787) #16	Otogl (MGP_CAROLIEiJ_G0015788) #17	Ppp1r12a (MGP_CAROLIEiJ_G0015789) #18	MGP_CAROLIEiJ_G0015790 #19	Syt1 (MGP_CAROLIEiJ_G0015791) #20	Nav3 (MGP_CAROLIEiJ_G0015792) #21	E2f7 (MGP_CAROLIEiJ_G0015793) #22	Csrp2 (MGP_CAROLIEiJ_G0015794) #23	Zdhhc17 (MGP_CAROLIEiJ_G0015795) #24	Osbpl8 (MGP_CAROLIEiJ_G0015796) #25	Bbs10 (MGP_CAROLIEiJ_G0015797) #26	Nap1l1 (MGP_CAROLIEiJ_G0015798) #27	Phlda1 (MGP_CAROLIEiJ_G0015799) #28	Krr1 (MGP_CAROLIEiJ_G0015800) #29	Glipr1 (MGP_CAROLIEiJ_G0015801) #30	Glipr1l2 (MGP_CAROLIEiJ_G0015802) #32	MGP_CAROLIEiJ_G0015803 #31	Caps2 (MGP_CAROLIEiJ_G0015804) #33	Kcnc2 (MGP_CAROLIEiJ_G0015805) #34	Atxn7l3b (MGP_CAROLIEiJ_G0015806) #35	MGP_CAROLIEiJ_G0015807 #36	Trhde (MGP_CAROLIEiJ_G0015808) #37
Shrew mouse	MODERN SPECIES	22	Slc6a15 (MGP_PahariEiJ_G0031309) #7	Tmtc2 (MGP_PahariEiJ_G0031308) #8	Mettl25 (MGP_PahariEiJ_G0031307) #9	Ccdc59 (MGP_PahariEiJ_G0031306) #10	Ppfia2 (MGP_PahariEiJ_G0031305) #11	Acss3 (MGP_PahariEiJ_G0031304) #12	Lin7a (MGP_PahariEiJ_G0031303) #13	Myf5 (MGP_PahariEiJ_G0031302) #14	Myf6 (MGP_PahariEiJ_G0031301) #15	Ptprq (MGP_PahariEiJ_G0031300) #16	MGP_PahariEiJ_G0031299 #17	Ppp1r12a (MGP_PahariEiJ_G0031298) #18	Pawr (MGP_PahariEiJ_G0031297) #19	Syt1 (MGP_PahariEiJ_G0031296) #20	MGP_PahariEiJ_G0031295 #21	E2f7 (MGP_PahariEiJ_G0031294) #22	Csrp2 (MGP_PahariEiJ_G0031293) #23	Zdhhc17 (MGP_PahariEiJ_G0031292) #24	Osbpl8 (MGP_PahariEiJ_G0031291) #25	Bbs10 (MGP_PahariEiJ_G0031290) #26	MGP_PahariEiJ_G0031289 #27	Phlda1 (MGP_PahariEiJ_G0031288) #28	Krr1 (MGP_PahariEiJ_G0031287) #29	Glipr1 (MGP_PahariEiJ_G0031286) #30	Glipr1l2 (MGP_PahariEiJ_G0031285) #32	MGP_PahariEiJ_G0031284 #31	Caps2 (MGP_PahariEiJ_G0031283) #33	Kcnc2 (MGP_PahariEiJ_G0031282) #34	Atxn7l3b (MGP_PahariEiJ_G0031281) #35	MGP_PahariEiJ_G0031280	Trhde (MGP_PahariEiJ_G0031279) #37
Rat	MODERN SPECIES	17	Mettl25 (ENSRNOG00000027451) #9	Ccdc59 (ENSRNOG00000004183) #10	ENSRNOG00000063471	Ppfia2 (ENSRNOG00000004353) #11	Acss3 (ENSRNOG00000004448) #12	Lin7a (ENSRNOG00000004527) #13	Myf5 (ENSRNOG00000004768) #14	Myf6 (ENSRNOG00000004878) #15	Ptprq (ENSRNOG00000056915) #16	Otogl (ENSRNOG00000030316) #17	Ppp1r12a (ENSRNOG00000004925) #18	Pawr (ENSRNOG00000005917) #19	Syt1 (ENSRNOG00000006426) #20	Brcc3dc (ENSRNOG00000070196)	Nav3 (ENSRNOG00000052157) #21	E2f7 (ENSRNOG00000026252) #22	Csrp2 (ENSRNOG00000003772) #23	Zdhhc17 (ENSRNOG00000003803) #24	Osbpl8 (ENSRNOG00000026962) #25	ENSRNOG00000062798	Bbs10 (ENSRNOG00000026913) #26	Nap1l1 (ENSRNOG00000003890) #27	Phlda1 (ENSRNOG00000004019) #28	Krr1 (ENSRNOG00000004035) #29	Glipr1 (ENSRNOG00000026644) #30	Glipr1l2 (ENSRNOG00000049053) #32	Glipr1l1 (ENSRNOG00000026634) #31	Caps2 (ENSRNOG00000026600) #33	Kcnc2 (ENSRNOG00000004077) #34	Atxn7l3b (ENSRNOG00000059744) #35	Trhde (ENSRNOG00000005278) #37
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00940000167051	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Chinese hamster chok1gshd	MODERN SPECIES	83	Ppfia2 (ENSCGRG00001020914) #11	Acss3 (ENSCGRG00001009906) #12	Lin7a (ENSCGRG00001003313) #13	Myf5 (ENSCGRG00001009370) #14	Myf6 (ENSCGRG00001006341) #15	Ptprq (ENSCGRG00001017128) #16	Otogl (ENSCGRG00001018530) #17	Ppp1r12a (ENSCGRG00001017263) #18	Pawr (ENSCGRG00001011044) #19	ENSCGRG00001009057	ENSCGRG00001010398	Syt1 (ENSCGRG00001000069) #20	Brcc3dc (ENSCGRG00001009076)	Nav3 (ENSCGRG00001022037) #21	ENSCGRG00001011762	E2f7 (ENSCGRG00001006568) #22	Csrp2 (ENSCGRG00001000844) #23	Zdhhc17 (ENSCGRG00001007660) #24	Osbpl8 (ENSCGRG00001021286) #25	Bbs10 (ENSCGRG00001010466) #26	ENSCGRG00001019257 #27	Phlda1 (ENSCGRG00001012896) #28	ENSCGRG00001005440	Krr1 (ENSCGRG00001005995) #29	Glipr1 (ENSCGRG00001017559) #30	ENSCGRG00001014628 #31	Caps2 (ENSCGRG00001012612) #33	Kcnc2 (ENSCGRG00001023381) #34	Atxn7l3b (ENSCGRG00001001803) #35	Trhde (ENSCGRG00001020946) #37	Tph2 (ENSCGRG00001012899)
Golden Hamster	MODERN SPECIES	628	Mettl25 (ENSMAUG00000020950) #9	Ccdc59 (ENSMAUG00000017516) #10	Ppfia2 (ENSMAUG00000021622) #11	ENSMAUG00000019031	Acss3 (ENSMAUG00000014131) #12	Lin7a (ENSMAUG00000007088) #13	Myf5 (ENSMAUG00000000933) #14	Myf6 (ENSMAUG00000019329) #15	Ptprq (ENSMAUG00000014282) #16	Otogl (ENSMAUG00000009930) #17	Ppp1r12a (ENSMAUG00000021712) #18	ENSMAUG00000008984	Syt1 (ENSMAUG00000012263) #20	ENSMAUG00000014224	Nav3 (ENSMAUG00000012505) #21	E2f7 (ENSMAUG00000010792) #22	Csrp2 (ENSMAUG00000018727) #23	Zdhhc17 (ENSMAUG00000021687) #24	Osbpl8 (ENSMAUG00000022092) #25	Bbs10 (ENSMAUG00000018240) #26	Nap1l1 (ENSMAUG00000016700) #27	ENSMAUG00000021584	Krr1 (ENSMAUG00000021283) #29	Glipr1l2 (ENSMAUG00000017252) #32	ENSMAUG00000022161 #31	Caps2 (ENSMAUG00000009850) #33	Kcnc2 (ENSMAUG00000010585) #34
Cricetidae_B	ANCESTRAL SPECIES	29	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Prairie vole	MODERN SPECIES	10	Tmtc2 (ENSMOCG00000012479) #8	Mettl25 (ENSMOCG00000018000) #9	Ccdc59 (ENSMOCG00000006690) #10	Ppfia2 (ENSMOCG00000007873) #11	Acss3 (ENSMOCG00000012086) #12	Lin7a (ENSMOCG00000021369) #13	Myf5 (ENSMOCG00000017847) #14	Myf6 (ENSMOCG00000015833) #15	Ptprq (ENSMOCG00000017842) #16	Otogl (ENSMOCG00000018409) #17	Ppp1r12a (ENSMOCG00000018418) #18	Pawr (ENSMOCG00000019570) #19	Syt1 (ENSMOCG00000012503) #20	ENSMOCG00000020523	Nav3 (ENSMOCG00000018391) #21	E2f7 (ENSMOCG00000021130) #22	Csrp2 (ENSMOCG00000007217) #23	Zdhhc17 (ENSMOCG00000002407) #24	Osbpl8 (ENSMOCG00000016633) #25	Bbs10 (ENSMOCG00000020010) #26	Nap1l1 (ENSMOCG00000012136) #27	Phlda1 (ENSMOCG00000021889) #28	Krr1 (ENSMOCG00000018635) #29	Glipr1 (ENSMOCG00000022141) #30	Glipr1l2 (ENSMOCG00000002411) #32	ENSMOCG00000013587 #31	Caps2 (ENSMOCG00000001012) #33	Kcnc2 (ENSMOCG00000022707) #34	Atxn7l3b (ENSMOCG00000007338) #35	ENSMOCG00000016064	Trhde (ENSMOCG00000000440) #37
Northern American deer mouse	MODERN SPECIES	9	Tmtc2 (ENSPEMG00000020725) #8	Mettl25 (ENSPEMG00000013112) #9	Ccdc59 (ENSPEMG00000031144) #10	Ppfia2 (ENSPEMG00000015993) #11	Acss3 (ENSPEMG00000017696) #12	Lin7a (ENSPEMG00000018576) #13	Myf5 (ENSPEMG00000018818) #14	Myf6 (ENSPEMG00000019751) #15	Ptprq (ENSPEMG00000019976) #16	Otogl (ENSPEMG00000005921) #17	Ppp1r12a (ENSPEMG00000011824) #18	Pawr (ENSPEMG00000031267) #19	Syt1 (ENSPEMG00000011853) #20	Brcc3dc (ENSPEMG00000012864)	Nav3 (ENSPEMG00000003783) #21	E2f7 (ENSPEMG00000013555) #22	Csrp2 (ENSPEMG00000012653) #23	Zdhhc17 (ENSPEMG00000011257) #24	Osbpl8 (ENSPEMG00000008934) #25	Bbs10 (ENSPEMG00000031116) #26	Nap1l1 (ENSPEMG00000000646) #27	Phlda1 (ENSPEMG00000020277) #28	Krr1 (ENSPEMG00000020228) #29	Glipr1 (ENSPEMG00000020190) #30	ENSPEMG00000020146 #32	ENSPEMG00000020129 #31	ENSPEMG00000030311 #31	Caps2 (ENSPEMG00000020036) #33	Kcnc2 (ENSPEMG00000014606) #34	Atxn7l3b (ENSPEMG00000027167) #35	Trhde (ENSPEMG00000022340) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	494	Ccdc59 (ENSNGAG00000023637) #10	ENSNGAG00000012599	Ppfia2 (ENSNGAG00000022807) #11	Acss3 (ENSNGAG00000015078) #12	Lin7a (ENSNGAG00000022827) #13	Myf5 (ENSNGAG00000003539) #14	Myf6 (ENSNGAG00000023390) #15	Ptprq (ENSNGAG00000024172) #16	Otogl (ENSNGAG00000022483) #17	ENSNGAG00000024231	Ppp1r12a (ENSNGAG00000023300) #18	Pawr (ENSNGAG00000015922) #19	Syt1 (ENSNGAG00000020988) #20	Nav3 (ENSNGAG00000024210) #21	ENSNGAG00000024182	E2f7 (ENSNGAG00000023644) #22	ENSNGAG00000023257 #23	Zdhhc17 (ENSNGAG00000009049) #24	Osbpl8 (ENSNGAG00000014231) #25	Bbs10 (ENSNGAG00000022298) #26	ENSNGAG00000014133	ENSNGAG00000022884
Lesser Egyptian jerboa	MODERN SPECIES	42	Ccdc59 (ENSJJAG00000015263) #10	ENSJJAG00000003779	Ppfia2 (ENSJJAG00000006298) #11	Acss3 (ENSJJAG00000008308) #12	Lin7a (ENSJJAG00000023503) #13	Myf5 (ENSJJAG00000003407) #14	Myf6 (ENSJJAG00000011250) #15	Ptprq (ENSJJAG00000017741) #16	Otogl (ENSJJAG00000019493) #17	Ppp1r12a (ENSJJAG00000023796) #18	Pawr (ENSJJAG00000018666) #19	Syt1 (ENSJJAG00000023399) #20	ENSJJAG00000022372	Nav3 (ENSJJAG00000012332) #21	ENSJJAG00000010552	E2f7 (ENSJJAG00000007878) #22	ENSJJAG00000005723	ENSJJAG00000014135 #23	ENSJJAG00000011419 #24	Osbpl8 (ENSJJAG00000024252) #25	Bbs10 (ENSJJAG00000023405) #26	ENSJJAG00000024142	Nap1l1 (ENSJJAG00000023205) #27	Phlda1 (ENSJJAG00000023924) #28	ENSJJAG00000023900 #29	ENSJJAG00000013157 #32	ENSJJAG00000023384 #30	ENSJJAG00000022416 #31	ENSJJAG00000009366 #33	Atxn7l3b (ENSJJAG00000002351) #35	ENSJJAG00000016750
Kangaroo rat	MODERN SPECIES	322	ENSDORG00000008703	Slc6a15 (ENSDORG00000000388) #7	Tmtc2 (ENSDORG00000005875) #8	Mettl25 (ENSDORG00000003006) #9	Ppfia2 (ENSDORG00000007289) #11	Acss3 (ENSDORG00000007288) #12	Lin7a (ENSDORG00000014355) #13	Myf5 (ENSDORG00000015437) #14	Myf6 (ENSDORG00000015435) #15	Ptprq (ENSDORG00000023208) #16	Otogl (ENSDORG00000028677) #17	Ppp1r12a (ENSDORG00000007157) #18	Pawr (ENSDORG00000029489) #19	Syt1 (ENSDORG00000003724) #20	Nav3 (ENSDORG00000011080) #21	ENSDORG00000026154 #22	Csrp2 (ENSDORG00000012441) #23	Zdhhc17 (ENSDORG00000012435) #24	Osbpl8 (ENSDORG00000000670) #25	Bbs10 (ENSDORG00000000668) #26	Nap1l1 (ENSDORG00000029138) #27	Phlda1 (ENSDORG00000027757) #28	ENSDORG00000023399	ENSDORG00000004614 #29	Glipr1 (ENSDORG00000004613) #30	ENSDORG00000027121 #32	Kcnc2 (ENSDORG00000000056) #34	Atxn7l3b (ENSDORG00000025438) #35	ENSDORG00000013399 #37	ENSDORG00000028797 #37	Tph2 (ENSDORG00000000779)
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000036317	PPFIA2 (ENSHGLG00000000429) #11	ACSS3 (ENSHGLG00000004579) #12	ENSHGLG00000003757 #13	MYF5 (ENSHGLG00000003654) #14	MYF6 (ENSHGLG00000003419) #15	PTPRQ (ENSHGLG00000011762) #16	OTOGL (ENSHGLG00000013295) #17	PPP1R12A (ENSHGLG00000014201) #18	ENSHGLG00000036431	PAWR (ENSHGLG00000017940) #19	SYT1 (ENSHGLG00000047548) #20	ENSHGLG00000042592	ENSHGLG00000010015	NAV3 (ENSHGLG00000012083) #21	E2F7 (ENSHGLG00000006491) #22	ENSHGLG00000008206 #23	ENSHGLG00000009233 #24	ENSHGLG00000004489	ENSHGLG00000044176	ENSHGLG00000008641	ENSHGLG00000033319	ENSHGLG00000039577	ENSHGLG00000008111 #25	BBS10 (ENSHGLG00000041362) #26	ENSHGLG00000046259	ENSHGLG00000014189 #27	ENSHGLG00000045931	KRR1 (ENSHGLG00000004459) #29	GLIPR1 (ENSHGLG00000037317) #30	ENSHGLG00000037384
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Guinea pig	MODERN SPECIES	9	SLC6A15 (ENSCPOG00000003103) #7	TMTC2 (ENSCPOG00000005425) #8	METTL25 (ENSCPOG00000011621) #9	CCDC59 (ENSCPOG00000036718) #10	PPFIA2 (ENSCPOG00000003459) #11	ACSS3 (ENSCPOG00000003451) #12	LIN7A (ENSCPOG00000001373) #13	MYF5 (ENSCPOG00000007766) #14	MYF6 (ENSCPOG00000030745) #15	PTPRQ (ENSCPOG00000031105) #16	OTOGL (ENSCPOG00000022231) #17	PPP1R12A (ENSCPOG00000004019) #18	PAWR (ENSCPOG00000002469) #19	SYT1 (ENSCPOG00000002054) #20	NAV3 (ENSCPOG00000015431) #21	E2F7 (ENSCPOG00000007375) #22	CSRP2 (ENSCPOG00000031460) #23	ZDHHC17 (ENSCPOG00000012534) #24	OSBPL8 (ENSCPOG00000001130) #25	BBS10 (ENSCPOG00000038158) #26	NAP1L1 (ENSCPOG00000019420) #27	PHLDA1 (ENSCPOG00000003245) #28	KRR1 (ENSCPOG00000014353) #29	GLIPR1 (ENSCPOG00000014351) #30	ENSCPOG00000013925 #32	ENSCPOG00000011301	GLIPR1L1 (ENSCPOG00000011726) #31	CAPS2 (ENSCPOG00000011709) #33	KCNC2 (ENSCPOG00000003474) #34	ATXN7L3B (ENSCPOG00000040398) #35	TRHDE (ENSCPOG00000007500) #37
Hystricomorpha_b	ANCESTRAL SPECIES	13	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Long-tailed chinchilla	MODERN SPECIES	112	TMTC2 (ENSCLAG00000008519) #8	METTL25 (ENSCLAG00000014989) #9	CCDC59 (ENSCLAG00000015050) #10	PPFIA2 (ENSCLAG00000008120) #11	ACSS3 (ENSCLAG00000005808) #12	ENSCLAG00000013764 #13	MYF5 (ENSCLAG00000014410) #14	MYF6 (ENSCLAG00000013875) #15	PTPRQ (ENSCLAG00000012232) #16	OTOGL (ENSCLAG00000006526) #17	PPP1R12A (ENSCLAG00000006399) #18	PAWR (ENSCLAG00000008196) #19	SYT1 (ENSCLAG00000004862) #20	ENSCLAG00000005685	NAV3 (ENSCLAG00000012036) #21	E2F7 (ENSCLAG00000007164) #22	CSRP2 (ENSCLAG00000008899) #23	ZDHHC17 (ENSCLAG00000011124) #24	ENSCLAG00000017859	OSBPL8 (ENSCLAG00000010204) #25	BBS10 (ENSCLAG00000007902) #26	ENSCLAG00000005333 #27	PHLDA1 (ENSCLAG00000006934) #28	KRR1 (ENSCLAG00000005111) #29	GLIPR1 (ENSCLAG00000006364) #30	GLIPR1L2 (ENSCLAG00000006004) #32	GLIPR1L1 (ENSCLAG00000005153) #31	ENSCLAG00000004453 #33	KCNC2 (ENSCLAG00000009275) #34	ATXN7L3B (ENSCLAG00000017725) #35	TRHDE (ENSCLAG00000005841) #37
Degu	MODERN SPECIES	45	PPFIA2 (ENSODEG00000007419) #11	ACSS3 (ENSODEG00000007503) #12	ENSODEG00000019454	LIN7A (ENSODEG00000007832) #13	MYF5 (ENSODEG00000007510) #14	MYF6 (ENSODEG00000007305) #15	PTPRQ (ENSODEG00000007761) #16	OTOGL (ENSODEG00000007895) #17	PPP1R12A (ENSODEG00000009363) #18	ENSODEG00000019636	PAWR (ENSODEG00000008160) #19	ENSODEG00000007440	SYT1 (ENSODEG00000008387) #20	ENSODEG00000007970	NAV3 (ENSODEG00000010398) #21	ENSODEG00000008575 #22	CSRP2 (ENSODEG00000008449) #23	ZDHHC17 (ENSODEG00000010670) #24	ENSODEG00000007367	OSBPL8 (ENSODEG00000007618) #25	BBS10 (ENSODEG00000007380) #26	ENSODEG00000007344 #27	PHLDA1 (ENSODEG00000019456) #28	ENSODEG00000006609	ENSODEG00000019616	ENSODEG00000007152 #29	GLIPR1 (ENSODEG00000008406) #30	ENSODEG00000019533	TMTC1 (ENSODEG00000007589)	ENSODEG00000006579	ERGIC2 (ENSODEG00000007081)
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b #27	ENSGT00440000039564.b #28	ENSGT00390000018775.ab #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b #27	ENSGT00440000039564.b #28	ENSGT00390000018775.ab #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.hb.b #27	ENSGT00440000039564.b #28	ENSGT00390000018775.ab #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00390000001376	ENSGT00390000008294.e.b.a.b	ENSGT00940000157371 #34	ENSGT00940000162576 #35
Arctic ground squirrel	MODERN SPECIES	177											OTOGL (ENSUPAG00010005372) #17	PPP1R12A (ENSUPAG00010005325) #18	PAWR (ENSUPAG00010005305) #19	SYT1 (ENSUPAG00010005294) #20	NAV3 (ENSUPAG00010005261) #21	E2F7 (ENSUPAG00010005233) #22	CSRP2 (ENSUPAG00010005224) #23	ZDHHC17 (ENSUPAG00010005181) #24	OSBPL8 (ENSUPAG00010005095) #25	BBS10 (ENSUPAG00010005089) #26	ENSUPAG00010004967	ENSUPAG00010004960 #28
Squirrel	MODERN SPECIES	168															NAV3 (ENSSTOG00000012725) #21	E2F7 (ENSSTOG00000007887) #22	CSRP2 (ENSSTOG00000010876) #23	ZDHHC17 (ENSSTOG00000010869) #24	OSBPL8 (ENSSTOG00000011866) #25	BBS10 (ENSSTOG00000011855) #26	NAP1L1 (ENSSTOG00000003046) #27	PHLDA1 (ENSSTOG00000020332) #28	KRR1 (ENSSTOG00000003620) #29	GLIPR1 (ENSSTOG00000003613) #30	ENSSTOG00000024468 #32	GLIPR1L1 (ENSSTOG00000020403) #31	ENSSTOG00000003438 #33	ENSSTOG00000028374	KCNC2 (ENSSTOG00000004842) #34	ATXN7L3B (ENSSTOG00000023624) #35	TRHDE (ENSSTOG00000003761) #37
Alpin marmot	MODERN SPECIES	11	SLC6A15 (ENSMMMG00000001050) #7	ENSMMMG00000001090	TMTC2 (ENSMMMG00000001120) #8	METTL25 (ENSMMMG00000001158) #9	CCDC59 (ENSMMMG00000001213) #10	PPFIA2 (ENSMMMG00000001244) #11	ACSS3 (ENSMMMG00000001391) #12	LIN7A (ENSMMMG00000001429) #13	MYF5 (ENSMMMG00000001446) #14	MYF6 (ENSMMMG00000001463) #15	PTPRQ (ENSMMMG00000001485) #16	OTOGL (ENSMMMG00000001599) #17	PPP1R12A (ENSMMMG00000001751) #18	SYT1 (ENSMMMG00000001991) #20	NAV3 (ENSMMMG00000002035) #21	E2F7 (ENSMMMG00000002119) #22	ENSMMMG00000002164 #23	ZDHHC17 (ENSMMMG00000002185) #24	OSBPL8 (ENSMMMG00000002240) #25	BBS10 (ENSMMMG00000002273) #26	ENSMMMG00000002289 #27	PHLDA1 (ENSMMMG00000002474) #28	KRR1 (ENSMMMG00000002493) #29	GLIPR1 (ENSMMMG00000002546) #30	GLIPR1L2 (ENSMMMG00000002582) #32	GLIPR1L1 (ENSMMMG00000002592) #31	CAPS2 (ENSMMMG00000002609) #33	ENSMMMG00000002677	KCNC2 (ENSMMMG00000002683) #34	ENSMMMG00000002698	ATXN7L3B (ENSMMMG00000002707) #35
Eurasian red squirrel	MODERN SPECIES	14	METTL25 (ENSSVLG00005002343) #9	CCDC59 (ENSSVLG00005002316) #10	PPFIA2 (ENSSVLG00005001201) #11	ACSS3 (ENSSVLG00005000239) #12	BLVRB (ENSSVLG00005025266)	LIN7A (ENSSVLG00005025250) #13	MYF5 (ENSSVLG00005025239) #14	MYF6 (ENSSVLG00005025222) #15	PTPRQ (ENSSVLG00005025041) #16	OTOGL (ENSSVLG00005024601) #17	PPP1R12A (ENSSVLG00005024407) #18	PAWR (ENSSVLG00005024360) #19	SYT1 (ENSSVLG00005024299) #20	NAV3 (ENSSVLG00005023837) #21	ENSSVLG00005023728	E2F7 (ENSSVLG00005023615) #22	ENSSVLG00005023521 #23	ZDHHC17 (ENSSVLG00005023480) #24	OSBPL8 (ENSSVLG00005023307) #25	ENSSVLG00005023266	BBS10 (ENSSVLG00005023257) #26	NAP1L1 (ENSSVLG00005023160) #27	ENSSVLG00005023108	KRR1 (ENSSVLG00005023069) #29	GLIPR1 (ENSSVLG00005023023) #30	ENSSVLG00005023001	GLIPR1L2 (ENSSVLG00005022916) #32	GLIPR1L1 (ENSSVLG00005022861) #31	CAPS2 (ENSSVLG00005022512) #33	KCNC2 (ENSSVLG00005022353) #34	ATXN7L3B (ENSSVLG00005022316) #35
Lagomorpha	ANCESTRAL SPECIES	113	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547.f.b #31	ENSGT00940000162547.f.a #31	ENSGT00940000162547.e #31
Rabbit	MODERN SPECIES	15	ENSOCUG00000036764	PPFIA2 (ENSOCUG00000015770) #11	ACSS3 (ENSOCUG00000015752) #12	LIN7A (ENSOCUG00000004203) #13	MYF5 (ENSOCUG00000025477) #14	MYF6 (ENSOCUG00000001457) #15	PTPRQ (ENSOCUG00000011455) #16	OTOGL (ENSOCUG00000014963) #17	ENSOCUG00000037584	PPP1R12A (ENSOCUG00000016701) #18	PAWR (ENSOCUG00000013722) #19	SYT1 (ENSOCUG00000014829) #20	ENSOCUG00000005148	NAV3 (ENSOCUG00000004936) #21	ENSOCUG00000025947	E2F7 (ENSOCUG00000004932) #22	ENSOCUG00000008330 #23	ENSOCUG00000027238	ZDHHC17 (ENSOCUG00000010401) #24	ENSOCUG00000028124	ENSOCUG00000032449	OSBPL8 (ENSOCUG00000010527) #25	BBS10 (ENSOCUG00000010522) #26	NAP1L1 (ENSOCUG00000013857) #27	PHLDA1 (ENSOCUG00000022950) #28	KRR1 (ENSOCUG00000003925) #29	GLIPR1 (ENSOCUG00000003921) #30	ENSOCUG00000031904 #31	ENSOCUG00000031541 #31	GLIPR1L2 (ENSOCUG00000003916) #32	ENSOCUG00000003909 #31
Pika	MODERN SPECIES	6842																E2F7 (ENSOPRG00000001896) #22
Tree shrew	MODERN SPECIES	3364																E2F7 (ENSTBEG00000005417) #22
Primates	ANCESTRAL SPECIES	6	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546.c #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024
Hominidae	ANCESTRAL SPECIES	4	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546.c #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a #27	ENSGT00910000147072	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546.c #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Gorilla	MODERN SPECIES	3	CCDC59 (ENSGGOG00000025296) #10	PPFIA2 (ENSGGOG00000026460) #11	ACSS3 (ENSGGOG00000010105) #12	LIN7A (ENSGGOG00000038053) #13	MYF5 (ENSGGOG00000004366) #14	MYF6 (ENSGGOG00000004369) #15	PTPRQ (ENSGGOG00000011494) #16	ENSGGOG00000015088 #17	ENSGGOG00000025286	PPP1R12A (ENSGGOG00000014574) #18	PAWR (ENSGGOG00000010093) #19	ENSGGOG00000022534	SYT1 (ENSGGOG00000024224) #20	ENSGGOG00000002908	NAV3 (ENSGGOG00000006574) #21	E2F7 (ENSGGOG00000012645) #22	ENSGGOG00000038839	ENSGGOG00000041578 #23	ENSGGOG00000039704 #23	ZDHHC17 (ENSGGOG00000023287) #24	ENSGGOG00000023867	OSBPL8 (ENSGGOG00000016140) #25	BBS10 (ENSGGOG00000023091) #26	ENSGGOG00000041304	NAP1L1 (ENSGGOG00000003883) #27	KRR1 (ENSGGOG00000013596) #29	GLIPR1 (ENSGGOG00000013591) #30	GLIPR1L2 (ENSGGOG00000024647) #32	GLIPR1L1 (ENSGGOG00000001021) #31	CAPS2 (ENSGGOG00000013620) #33	KCNC2 (ENSGGOG00000003896) #34
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546.c #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Pan	ANCESTRAL SPECIES	4	ENSGT00530000063745.b #9	ENSGT00390000006546.c #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154389.b.e	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00950000182922.a.a.a.b.a.b.a.b.b.a	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34
Chimpanzee	MODERN SPECIES	3	PPFIA2 (ENSPTRG00000005265) #11	ACSS3 (ENSPTRG00000005263) #12	LIN7A (ENSPTRG00000005262) #13	MYF5 (ENSPTRG00000005261) #14	MYF6 (ENSPTRG00000005260) #15	PTPRQ (ENSPTRG00000039205) #16	OTOGL (ENSPTRG00000005257) #17	ENSPTRG00000045837	PPP1R12A (ENSPTRG00000005252) #18	PAWR (ENSPTRG00000005250) #19	SYT1 (ENSPTRG00000024064) #20	ENSPTRG00000050322	ENSPTRG00000044151	ENSPTRG00000046920	NAV3 (ENSPTRG00000005247) #21	E2F7 (ENSPTRG00000005245) #22	ENSPTRG00000051009	CSRP2 (ENSPTRG00000005244) #23	ZDHHC17 (ENSPTRG00000005243) #24	ENSPTRG00000048649	ENSPTRG00000045883	OSBPL8 (ENSPTRG00000005242) #25	BBS10 (ENSPTRG00000005241) #26	ENSPTRG00000043245	NAP1L1 (ENSPTRG00000005240) #27	PHLDA1 (ENSPTRG00000043613) #28	KRR1 (ENSPTRG00000005238) #29	GLIPR1 (ENSPTRG00000005237) #30	GLIPR1L2 (ENSPTRG00000005236) #32	GLIPR1L1 (ENSPTRG00000005234) #31	CAPS2 (ENSPTRG00000005233) #33
Bonobo	MODERN SPECIES	3	METTL25 (ENSPPAG00000028130) #9	CCDC59 (ENSPPAG00000030113) #10	PPFIA2 (ENSPPAG00000033118) #11	ACSS3 (ENSPPAG00000040977) #12	LIN7A (ENSPPAG00000026771) #13	MYF5 (ENSPPAG00000028699) #14	MYF6 (ENSPPAG00000032290) #15	PTPRQ (ENSPPAG00000000830) #16	OTOGL (ENSPPAG00000014085) #17	PPP1R12A (ENSPPAG00000030740) #18	PAWR (ENSPPAG00000043711) #19	SYT1 (ENSPPAG00000029261) #20	ENSPPAG00000028521	ENSPPAG00000015674	NAV3 (ENSPPAG00000036134) #21	E2F7 (ENSPPAG00000002532) #22	ENSPPAG00000042681	ENSPPAG00000042089 #23	ZDHHC17 (ENSPPAG00000030097) #24	ENSPPAG00000040481	OSBPL8 (ENSPPAG00000043423) #25	BBS10 (ENSPPAG00000028532) #26	ENSPPAG00000043638	NAP1L1 (ENSPPAG00000043344) #27	PHLDA1 (ENSPPAG00000030521) #28	KRR1 (ENSPPAG00000011194) #29	GLIPR1 (ENSPPAG00000038902) #30	GLIPR1L2 (ENSPPAG00000038173) #32	GLIPR1L1 (ENSPPAG00000027759) #31	CAPS2 (ENSPPAG00000005409) #33	ENSPPAG00000040201 #34
Human	MODERN SPECIES	3	SLC6A15 (ENSG00000072041) #7	TMTC2 (ENSG00000179104) #8	METTL25 (ENSG00000127720) #9	CCDC59 (ENSG00000133773) #10	PPFIA2 (ENSG00000139220) #11	ACSS3 (ENSG00000111058) #12	LIN7A (ENSG00000111052) #13	MYF5 (ENSG00000111049) #14	MYF6 (ENSG00000111046) #15	PTPRQ (ENSG00000139304) #16	OTOGL (ENSG00000165899) #17	PPP1R12A (ENSG00000058272) #18	PAWR (ENSG00000177425) #19	SYT1 (ENSG00000067715) #20	NAV3 (ENSG00000067798) #21	E2F7 (ENSG00000165891) #22	CSRP2 (ENSG00000175183) #23	ZDHHC17 (ENSG00000186908) #24	OSBPL8 (ENSG00000091039) #25	BBS10 (ENSG00000179941) #26	NAP1L1 (ENSG00000187109) #27	PHLDA1 (ENSG00000139289) #28	KRR1 (ENSG00000111615) #29	GLIPR1 (ENSG00000139278) #30	GLIPR1L2 (ENSG00000180481) #32	GLIPR1L1 (ENSG00000173401) #31	CAPS2 (ENSG00000180881) #33	KCNC2 (ENSG00000166006) #34	ATXN7L3B (ENSG00000253719) #35	TRHDE (ENSG00000072657) #37	TPH2 (ENSG00000139287)
Orangutan	MODERN SPECIES	3	METTL25 (ENSPPYG00000004805) #9	CCDC59 (ENSPPYG00000004804) #10	PPFIA2 (ENSPPYG00000004803) #11	ACSS3 (ENSPPYG00000004802) #12	LIN7A (ENSPPYG00000039262) #13	MYF5 (ENSPPYG00000004800) #14	MYF6 (ENSPPYG00000004799) #15	PTPRQ (ENSPPYG00000041069) #16	OTOGL (ENSPPYG00000004797) #17	PPP1R12A (ENSPPYG00000004796) #18	ENSPPYG00000025853	PAWR (ENSPPYG00000004795) #19	SYT1 (ENSPPYG00000004794) #20	ENSPPYG00000004793	NAV3 (ENSPPYG00000004792) #21	E2F7 (ENSPPYG00000004791) #22	ENSPPYG00000031243 #23	ZDHHC17 (ENSPPYG00000004789) #24	OSBPL8 (ENSPPYG00000004788) #25	ENSPPYG00000037353	BBS10 (ENSPPYG00000004787) #26	ENSPPYG00000032561	NAP1L1 (ENSPPYG00000004786) #27	ENSPPYG00000038710	PHLDA1 (ENSPPYG00000041713) #28	KRR1 (ENSPPYG00000004785) #29	GLIPR1 (ENSPPYG00000004784) #30	GLIPR1L2 (ENSPPYG00000004783) #32	GLIPR1L1 (ENSPPYG00000004782) #31	CAPS2 (ENSPPYG00000004781) #33	KCNC2 (ENSPPYG00000004780) #34
Gibbon	MODERN SPECIES		SLC6A15 (ENSNLEG00000005336) #7	TMTC2 (ENSNLEG00000005311) #8	METTL25 (ENSNLEG00000005299) #9	CCDC59 (ENSNLEG00000033968) #10	PPFIA2 (ENSNLEG00000005251) #11	ACSS3 (ENSNLEG00000005227) #12	LIN7A (ENSNLEG00000032491) #13	MYF5 (ENSNLEG00000005207) #14	MYF6 (ENSNLEG00000032583) #15	PTPRQ (ENSNLEG00000005154) #16	OTOGL (ENSNLEG00000005115) #17	PPP1R12A (ENSNLEG00000005041) #18	PAWR (ENSNLEG00000005035) #19	SYT1 (ENSNLEG00000004995) #20	NAV3 (ENSNLEG00000004917) #21	E2F7 (ENSNLEG00000004897) #22	ENSNLEG00000028737	ENSNLEG00000004885 #23	ZDHHC17 (ENSNLEG00000004841) #24	OSBPL8 (ENSNLEG00000004750) #25	BBS10 (ENSNLEG00000004748) #26	ENSNLEG00000031630	NAP1L1 (ENSNLEG00000004682) #27	ENSNLEG00000004680 #28	KRR1 (ENSNLEG00000004647) #29	GLIPR1 (ENSNLEG00000004629) #30	GLIPR1L2 (ENSNLEG00000004622) #32	GLIPR1L1 (ENSNLEG00000004609) #31	CAPS2 (ENSNLEG00000004582) #33	KCNC2 (ENSNLEG00000004570) #34	ATXN7L3B (ENSNLEG00000018759) #35
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000017839.o.b.b.b.f	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000017839.o.b.b.b.f	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00390000009168.hb	ENSGT01050000244986.b.b.d.a.a.b	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000017839.o.b.b.b.f	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33
Macaca	ANCESTRAL SPECIES	6	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00910000147454	ENSGT00950000183030.m.a.a.b.b.a.b.a	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00390000009168.hb	ENSGT01050000244986.b.b.d.a.a.b	ENSGT00940000156622 #25	ENSGT00960000192410	ENSGT00390000002417 #26	ENSGT00940000153362.a.lb #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34
Pig-tailed macaque	MODERN SPECIES	517	MYF5 (ENSMNEG00000039510) #14	MYF6 (ENSMNEG00000019739) #15	PTPRQ (ENSMNEG00000045562) #16	OTOGL (ENSMNEG00000034772) #17	PPP1R12A (ENSMNEG00000033679) #18	PAWR (ENSMNEG00000004020) #19	SYT1 (ENSMNEG00000030551) #20	ENSMNEG00000031657	ENSMNEG00000038165	ENSMNEG00000037055	ENSMNEG00000028899	ENSMNEG00000026858	ENSMNEG00000009689	ENSMNEG00000000985	NAV3 (ENSMNEG00000043424) #21	E2F7 (ENSMNEG00000025875) #22	CSRP2 (ENSMNEG00000030922) #23	ZDHHC17 (ENSMNEG00000028456) #24	ENSMNEG00000035026	ENSMNEG00000032096	OSBPL8 (ENSMNEG00000028835) #25	ENSMNEG00000030308	BBS10 (ENSMNEG00000040224) #26	NAP1L1 (ENSMNEG00000035793) #27	PHLDA1 (ENSMNEG00000033607) #28	ENSMNEG00000040738	ENSMNEG00000045114	ENSMNEG00000034922 #29	GLIPR1 (ENSMNEG00000044536) #30	GLIPR1L2 (ENSMNEG00000044396) #32	GLIPR1L1 (ENSMNEG00000028603) #31
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000157479 #12	ENSGT00940000153052.c.b.a.a.a.a.b.b.b	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.b.a.b.c.b	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00950000183030.m.a.a.b.b.a.b.a	ENSGT00940000158014 #21	ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.a.a.b	ENSGT01050000245239.a.a	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a	ENSGT01050000244986.b.b.d.a.a.b.a	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.lb #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000164709.a.b.b.a.b.b.a.a.a.b
Rhesus	MODERN SPECIES	2	MYF5 (ENSMMUG00000011669) #14	MYF6 (ENSMMUG00000011667) #15	PTPRQ (ENSMMUG00000037711) #16	OTOGL (ENSMMUG00000000121) #17	PPP1R12A (ENSMMUG00000019214) #18	ENSMMUG00000053591	PAWR (ENSMMUG00000015179) #19	SYT1 (ENSMMUG00000005530) #20	ENSMMUG00000060137	ENSMMUG00000051304	ENSMMUG00000058640	NAV3 (ENSMMUG00000021329) #21	ENSMMUG00000060140	ENSMMUG00000055171	ENSMMUG00000059985	E2F7 (ENSMMUG00000022846) #22	ENSMMUG00000052719	CSRP2 (ENSMMUG00000018257) #23	ZDHHC17 (ENSMMUG00000018254) #24	ENSMMUG00000057698	OSBPL8 (ENSMMUG00000017864) #25	BBS10 (ENSMMUG00000056087) #26	NAP1L1 (ENSMMUG00000015583) #27	PHLDA1 (ENSMMUG00000064103) #28	ENSMMUG00000053099	KRR1 (ENSMMUG00000009640) #29	GLIPR1L2 (ENSMMUG00000012290) #32	GLIPR1L1 (ENSMMUG00000012289) #31	CAPS2 (ENSMMUG00000012288) #33	KCNC2 (ENSMMUG00000012362) #34	ENSMMUG00000051853
Crab-eating macaque	MODERN SPECIES	2	PTPRQ (ENSMFAG00000044210) #16	OTOGL (ENSMFAG00000031786) #17	PPP1R12A (ENSMFAG00000034239) #18	ENSMFAG00000049694	ENSMFAG00000063729	PAWR (ENSMFAG00000062333) #19	ENSMFAG00000050054	SYT1 (ENSMFAG00000003495) #20	ENSMFAG00000000157	ENSMFAG00000034379	ENSMFAG00000034925	NAV3 (ENSMFAG00000044289) #21	ENSMFAG00000059233	ENSMFAG00000060207	ENSMFAG00000065572	E2F7 (ENSMFAG00000000355) #22	CSRP2 (ENSMFAG00000033853) #23	ZDHHC17 (ENSMFAG00000042288) #24	ENSMFAG00000034161	ENSMFAG00000047389	ENSMFAG00000057937	OSBPL8 (ENSMFAG00000036321) #25	BBS10 (ENSMFAG00000033883) #26	NAP1L1 (ENSMFAG00000001457) #27	PHLDA1 (ENSMFAG00000001119) #28	ENSMFAG00000053039	ENSMFAG00000032969	ENSMFAG00000001123	KRR1 (ENSMFAG00000000042) #29	GLIPR1 (ENSMFAG00000003978) #30	GLIPR1L1 (ENSMFAG00000031259) #31
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00940000153294.m.b.s.f	ENSGT00390000014818.g.b.a.a.a.b.b	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00390000009168.hb	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00940000158854.ab.a	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000155142.i.a.a	ENSGT00390000003133.i.a	ENSGT00940000163914.c.a	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00390000009168.hb	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00940000158854.ab.a	ENSGT00390000018052.k	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34
Drill	MODERN SPECIES	821				PPP1R12A (ENSMLEG00000040285) #18	PAWR (ENSMLEG00000041230) #19	ENSMLEG00000039162	SYT1 (ENSMLEG00000029930) #20	ENSMLEG00000037266	ENSMLEG00000014509	ENSMLEG00000028959	ENSMLEG00000035186	ENSMLEG00000020902	ENSMLEG00000034369	ENSMLEG00000027815	NAV3 (ENSMLEG00000033553) #21	E2F7 (ENSMLEG00000040254) #22	CSRP2 (ENSMLEG00000041421) #23	ZDHHC17 (ENSMLEG00000009010) #24	ENSMLEG00000042240	ENSMLEG00000040060	OSBPL8 (ENSMLEG00000035972) #25	BBS10 (ENSMLEG00000042359) #26	NAP1L1 (ENSMLEG00000044434) #27	PHLDA1 (ENSMLEG00000037110) #28	ENSMLEG00000027928	ENSMLEG00000039434	ENSMLEG00000042283	KRR1 (ENSMLEG00000037074) #29	GLIPR1 (ENSMLEG00000037327) #30	GLIPR1L2 (ENSMLEG00000040765) #32	GLIPR1L1 (ENSMLEG00000020393) #31
Sooty mangabey	MODERN SPECIES	582	ENSCATG00000038856	PPFIA2 (ENSCATG00000040747) #11	ACSS3 (ENSCATG00000030914) #12	LIN7A (ENSCATG00000029939) #13	MYF5 (ENSCATG00000042162) #14	MYF6 (ENSCATG00000029151) #15	PTPRQ (ENSCATG00000039610) #16	OTOGL (ENSCATG00000038125) #17	PPP1R12A (ENSCATG00000038278) #18	PAWR (ENSCATG00000034935) #19	SYT1 (ENSCATG00000033541) #20	ENSCATG00000044466	ENSCATG00000040529	ENSCATG00000017337	NAV3 (ENSCATG00000032040) #21	E2F7 (ENSCATG00000035481) #22	CSRP2 (ENSCATG00000040566) #23	ZDHHC17 (ENSCATG00000040479) #24	ENSCATG00000044128	ENSCATG00000039522	ENSCATG00000005498	OSBPL8 (ENSCATG00000036635) #25	BBS10 (ENSCATG00000042101) #26	ENSCATG00000039964	NAP1L1 (ENSCATG00000032285) #27	ENSCATG00000010102	ENSCATG00000040362	KRR1 (ENSCATG00000038219) #29	GLIPR1 (ENSCATG00000007700) #30	GLIPR1L2 (ENSCATG00000032595) #32	GLIPR1L1 (ENSCATG00000035838) #31
Olive baboon	MODERN SPECIES	19	ACSS3 (ENSPANG00000019084) #12	LIN7A (ENSPANG00000005931) #13	MYF5 (ENSPANG00000020394) #14	MYF6 (ENSPANG00000044306) #15	ENSPANG00000005319	PTPRQ (ENSPANG00000014456) #16	OTOGL (ENSPANG00000012907) #17	ENSPANG00000047805	PPP1R12A (ENSPANG00000026354) #18	PAWR (ENSPANG00000009557) #19	SYT1 (ENSPANG00000009048) #20	ENSPANG00000040020	ENSPANG00000015985	ENSPANG00000043139	NAV3 (ENSPANG00000007911) #21	E2F7 (ENSPANG00000004929) #22	CSRP2 (ENSPANG00000023047) #23	ZDHHC17 (ENSPANG00000004050) #24	ENSPANG00000028903	OSBPL8 (ENSPANG00000009379) #25	BBS10 (ENSPANG00000026355) #26	NAP1L1 (ENSPANG00000009165) #27	PHLDA1 (ENSPANG00000013115) #28	ENSPANG00000048738	ENSPANG00000047595	ENSPANG00000031665	KRR1 (ENSPANG00000019085) #29	GLIPR1 (ENSPANG00000005562) #30	GLIPR1L2 (ENSPANG00000036151) #32	GLIPR1L1 (ENSPANG00000032562) #31	CAPS2 (ENSPANG00000017443) #33
Vervet Monkey	MODERN SPECIES	2	CCDC59 (ENSCSAG00000003867) #10	ENSCSAG00000003868 #11	PPFIA2 (ENSCSAG00000003876) #11	ACSS3 (ENSCSAG00000003882) #12	LIN7A (ENSCSAG00000003887) #13	MYF5 (ENSCSAG00000003889) #14	MYF6 (ENSCSAG00000003893) #15	PTPRQ (ENSCSAG00000003913) #16	OTOGL (ENSCSAG00000003939) #17	PPP1R12A (ENSCSAG00000003956) #18	PAWR (ENSCSAG00000003962) #19	SYT1 (ENSCSAG00000003971) #20	ENSCSAG00000018914	ENSCSAG00000018912	ENSCSAG00000003979 #21	E2F7 (ENSCSAG00000003998) #22	CSRP2 (ENSCSAG00000004009) #23	ZDHHC17 (ENSCSAG00000004014) #24	OSBPL8 (ENSCSAG00000004024) #25	BBS10 (ENSCSAG00000004028) #26	NAP1L1 (ENSCSAG00000004030) #27	ENSCSAG00000018909	KRR1 (ENSCSAG00000004034) #29	GLIPR1 (ENSCSAG00000004038) #30	GLIPR1L2 (ENSCSAG00000004041) #32	GLIPR1L1 (ENSCSAG00000004045) #31	CAPS2 (ENSCSAG00000004056) #33	KCNC2 (ENSCSAG00000004064) #34	ATXN7L3B (ENSCSAG00000018907) #35	TRHDE (ENSCSAG00000004072) #37	TBC1D15 (ENSCSAG00000004078)
Rhinopithecus	ANCESTRAL SPECIES	358														ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34
Black snub-nosed monkey	MODERN SPECIES	416												ENSRBIG00000044674	ENSRBIG00000044553	ENSRBIG00000035549	NAV3 (ENSRBIG00000032816) #21	E2F7 (ENSRBIG00000044218) #22	CSRP2 (ENSRBIG00000001565) #23	ZDHHC17 (ENSRBIG00000036627) #24	OSBPL8 (ENSRBIG00000042807) #25	BBS10 (ENSRBIG00000044840) #26	ENSRBIG00000044471 #27	ENSRBIG00000039726	PHLDA1 (ENSRBIG00000034999) #28	ENSRBIG00000034429	ENSRBIG00000029304	KRR1 (ENSRBIG00000033716) #29	GLIPR1 (ENSRBIG00000034588) #30	GLIPR1L2 (ENSRBIG00000040782) #32	GLIPR1L1 (ENSRBIG00000031640) #31
Golden snub-nosed monkey	MODERN SPECIES	1031																E2F7 (ENSRROG00000031867) #22	CSRP2 (ENSRROG00000031526) #23	ZDHHC17 (ENSRROG00000039872) #24	OSBPL8 (ENSRROG00000042405) #25	BBS10 (ENSRROG00000028824) #26	ENSRROG00000014250	NAP1L1 (ENSRROG00000026775) #27	ENSRROG00000033201	PHLDA1 (ENSRROG00000007029) #28	ENSRROG00000024996	ENSRROG00000037708	KRR1 (ENSRROG00000029658) #29	GLIPR1 (ENSRROG00000043395) #30	ENSRROG00000041620	ENSRROG00000016846	GLIPR1L2 (ENSRROG00000017927) #32
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00910000148286	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.u.a.b #23	ENSGT00940000154980.u.a.a #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00910000147072.b	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35
Cebidae	ANCESTRAL SPECIES	2	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.u.a.a #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00910000147072.b	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Cebidae_a	ANCESTRAL SPECIES	8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00550000074807.d	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.u.a.a #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00910000147072.b	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Capuchin	MODERN SPECIES	67													ALCAM (ENSCCAG00000034808)	ENSCCAG00000036645	CBLB (ENSCCAG00000031829)	E2F7 (ENSCCAG00000020477) #22	CSRP2 (ENSCCAG00000027954) #23	ZDHHC17 (ENSCCAG00000024753) #24	ENSCCAG00000026832 #25	BBS10 (ENSCCAG00000010754) #26	NAP1L1 (ENSCCAG00000030757) #27	ENSCCAG00000029133	PHLDA1 (ENSCCAG00000030384) #28	GLIPR1 (ENSCCAG00000033906) #30	KRR1 (ENSCCAG00000021457) #29	GLIPR1L2 (ENSCCAG00000021275) #32	GLIPR1L1 (ENSCCAG00000006107) #31	CAPS2 (ENSCCAG00000033136) #33	KCNC2 (ENSCCAG00000028917) #34	ENSCCAG00000000428	ENSCCAG00000010640
Bolivian squirrel monkey	MODERN SPECIES	67	ACSS3 (ENSSBOG00000018710) #12	ENSSBOG00000022040	ENSSBOG00000034028	LIN7A (ENSSBOG00000030034) #13	MYF5 (ENSSBOG00000019536) #14	MYF6 (ENSSBOG00000021822) #15	PTPRQ (ENSSBOG00000027538) #16	OTOGL (ENSSBOG00000033681) #17	ENSSBOG00000026289	PPP1R12A (ENSSBOG00000033660) #18	PAWR (ENSSBOG00000025731) #19	SYT1 (ENSSBOG00000033271) #20	ENSSBOG00000025849	ENSSBOG00000036163	NAV3 (ENSSBOG00000036099) #21	E2F7 (ENSSBOG00000028674) #22	ENSSBOG00000014459 #23	ZDHHC17 (ENSSBOG00000036173) #24	OSBPL8 (ENSSBOG00000030671) #25	BBS10 (ENSSBOG00000022169) #26	ENSSBOG00000034714 #27	KRR1 (ENSSBOG00000029569) #29	GLIPR1 (ENSSBOG00000033770) #30	ENSSBOG00000025791	GLIPR1L2 (ENSSBOG00000027126) #32	GLIPR1L1 (ENSSBOG00000033891) #31	CAPS2 (ENSSBOG00000018991) #33	KCNC2 (ENSSBOG00000022617) #34	ATXN7L3B (ENSSBOG00000006505) #35	TRHDE (ENSSBOG00000029813) #37	TPH2 (ENSSBOG00000029996)
Marmoset	MODERN SPECIES	21	METTL25 (ENSCJAG00000019400) #9	CCDC59 (ENSCJAG00000019396) #10	PPFIA2 (ENSCJAG00000019370) #11	ACSS3 (ENSCJAG00000019352) #12	LIN7A (ENSCJAG00000019343) #13	MYF5 (ENSCJAG00000019340) #14	MYF6 (ENSCJAG00000081789) #15	PTPRQ (ENSCJAG00000019332) #16	OTOGL (ENSCJAG00000019323) #17	PPP1R12A (ENSCJAG00000019271) #18	PAWR (ENSCJAG00000019265) #19	SYT1 (ENSCJAG00000019262) #20	ENSCJAG00000078194	ENSCJAG00000078124	NAV3 (ENSCJAG00000019176) #21	E2F7 (ENSCJAG00000019162) #22	ENSCJAG00000019153 #23	ZDHHC17 (ENSCJAG00000019075) #24	OSBPL8 (ENSCJAG00000001055) #25	BBS10 (ENSCJAG00000001113) #26	ENSCJAG00000078161	NAP1L1 (ENSCJAG00000001115) #27	PHLDA1 (ENSCJAG00000072700) #28	ENSCJAG00000075772	ENSCJAG00000077543	ENSCJAG00000070252	ENSCJAG00000077700	KRR1 (ENSCJAG00000001181) #29	ENSCJAG00000069534	GLIPR1L2 (ENSCJAG00000001222) #32	ENSCJAG00000083004
Mas night monkey	MODERN SPECIES	833	ACSS3 (ENSANAG00000034361) #12	LIN7A (ENSANAG00000032889) #13	MYF5 (ENSANAG00000023208) #14	MYF6 (ENSANAG00000024892) #15	PTPRQ (ENSANAG00000035871) #16	OTOGL (ENSANAG00000024695) #17	ENSANAG00000036662	ENSANAG00000019658	PPP1R12A (ENSANAG00000034824) #18	PAWR (ENSANAG00000022396) #19	SYT1 (ENSANAG00000025826) #20	ENSANAG00000023157	ENSANAG00000023582	NAV3 (ENSANAG00000037686) #21	ENSANAG00000032226	E2F7 (ENSANAG00000036545) #22	ENSANAG00000021237 #23	ENSANAG00000028981	ENSANAG00000023471	ZDHHC17 (ENSANAG00000030636) #24
Tarsier	MODERN SPECIES	6007																E2F7 (ENSTSYG00000008243) #22	CSRP2 (ENSTSYG00000007974) #23	ZDHHC17 (ENSTSYG00000007950) #24
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394.b #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394.b #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Mouse lemur	MODERN SPECIES	29	TMTC2 (ENSMICG00000031682) #8	METTL25 (ENSMICG00000027175) #9	CCDC59 (ENSMICG00000041747) #10	PPFIA2 (ENSMICG00000010822) #11	ACSS3 (ENSMICG00000010809) #12	LIN7A (ENSMICG00000033894) #13	MYF5 (ENSMICG00000036139) #14	MYF6 (ENSMICG00000004274) #15	PTPRQ (ENSMICG00000038737) #16	OTOGL (ENSMICG00000026871) #17	PPP1R12A (ENSMICG00000032335) #18	ENSMICG00000032513	PAWR (ENSMICG00000031649) #19	SYT1 (ENSMICG00000015517) #20	NAV3 (ENSMICG00000003403) #21	E2F7 (ENSMICG00000013872) #22	ENSMICG00000014368	CSRP2 (ENSMICG00000047076) #23	ZDHHC17 (ENSMICG00000033453) #24	ENSMICG00000029525	OSBPL8 (ENSMICG00000000969) #25	BBS10 (ENSMICG00000042947) #26	NAP1L1 (ENSMICG00000006036) #27	KRR1 (ENSMICG00000015127) #29	GLIPR1 (ENSMICG00000015121) #30	GLIPR1L2 (ENSMICG00000037234) #32	ENSMICG00000015888 #31	CAPS2 (ENSMICG00000015872) #33	KCNC2 (ENSMICG00000017734) #34	ATXN7L3B (ENSMICG00000033344) #35	TRHDE (ENSMICG00000014223) #37
Lemuriformes_a	ANCESTRAL SPECIES	201															ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000161696	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35
Coquerels sifaka	MODERN SPECIES	402														NAV3 (ENSPCOG00000028313) #21	ENSPCOG00000013372	E2F7 (ENSPCOG00000022301) #22	CSRP2 (ENSPCOG00000019899) #23	ZDHHC17 (ENSPCOG00000018266) #24	OSBPL8 (ENSPCOG00000022869) #25	BBS10 (ENSPCOG00000025178) #26	ENSPCOG00000022339	PHLDA1 (ENSPCOG00000020854) #28	KRR1 (ENSPCOG00000012869) #29	GLIPR1 (ENSPCOG00000017258) #30
Greater bamboo lemur	MODERN SPECIES	749													NAV3 (ENSPSMG00000004708) #21	ENSPSMG00000004524	ENSPSMG00000004520	E2F7 (ENSPSMG00000004506) #22	CSRP2 (ENSPSMG00000004453) #23	ZDHHC17 (ENSPSMG00000004438) #24	ENSPSMG00000004399	OSBPL8 (ENSPSMG00000004309) #25
Bushbaby	MODERN SPECIES	122	METTL25 (ENSOGAG00000004384) #9	CCDC59 (ENSOGAG00000004383) #10	ENSOGAG00000025088	PPFIA2 (ENSOGAG00000014823) #11	ACSS3 (ENSOGAG00000014813) #12	LIN7A (ENSOGAG00000004616) #13	MYF5 (ENSOGAG00000001039) #14	MYF6 (ENSOGAG00000001038) #15	PTPRQ (ENSOGAG00000025362) #16	OTOGL (ENSOGAG00000030466) #17	PPP1R12A (ENSOGAG00000010740) #18	PAWR (ENSOGAG00000027944) #19	SYT1 (ENSOGAG00000009943) #20	NAV3 (ENSOGAG00000010604) #21	ENSOGAG00000030290	E2F7 (ENSOGAG00000010821) #22	CSRP2 (ENSOGAG00000013999) #23	ZDHHC17 (ENSOGAG00000013994) #24	OSBPL8 (ENSOGAG00000017084) #25	BBS10 (ENSOGAG00000025855) #26	NAP1L1 (ENSOGAG00000010319) #27	PHLDA1 (ENSOGAG00000010317) #28	ENSOGAG00000010313 #29	GLIPR1 (ENSOGAG00000010309) #30	GLIPR1L2 (ENSOGAG00000010303) #32	ENSOGAG00000010299 #31	CAPS2 (ENSOGAG00000010291) #33	ENSOGAG00000006608	KCNC2 (ENSOGAG00000000768) #34
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157713 #22
Common shrew	MODERN SPECIES	4683																E2F7 (ENSSARG00000004122) #22
Hedgehog	MODERN SPECIES	6020																ENSEEUG00000000248 #22
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Carnivora	ANCESTRAL SPECIES	3	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Caniformia	ANCESTRAL SPECIES	20	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Caniformia_b	ANCESTRAL SPECIES	18	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Ursidae	ANCESTRAL SPECIES	13	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Ursus	ANCESTRAL SPECIES	23															ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35
Polar bear	DUPLICATION
Polar bear	MODERN SPECIES	113														NAV3 (ENSUMAG00000021555) #21	ENSUMAG00000021519 #22	ENSUMAG00000021516 #22	CSRP2 (ENSUMAG00000021507) #23	ZDHHC17 (ENSUMAG00000021425) #24	OSBPL8 (ENSUMAG00000021330) #25	BBS10 (ENSUMAG00000021286) #26	NAP1L1 (ENSUMAG00000021259) #27	KRR1 (ENSUMAG00000021247) #29	GLIPR1 (ENSUMAG00000021245) #30	ENSUMAG00000021242	GLIPR1L2 (ENSUMAG00000021237) #32	GLIPR1L1 (ENSUMAG00000021232) #31	ENSUMAG00000021228 #33	KCNC2 (ENSUMAG00000021219) #34	ENSUMAG00000021205	ATXN7L3B (ENSUMAG00000021202) #35	ENSUMAG00000021192
Polar bear	MODERN SPECIES	113															NAV3 (ENSUMAG00000021555) #21	ENSUMAG00000021519 #22	ENSUMAG00000021516 #22	CSRP2 (ENSUMAG00000021507) #23	ZDHHC17 (ENSUMAG00000021425) #24	OSBPL8 (ENSUMAG00000021330) #25	BBS10 (ENSUMAG00000021286) #26	NAP1L1 (ENSUMAG00000021259) #27	KRR1 (ENSUMAG00000021247) #29	GLIPR1 (ENSUMAG00000021245) #30	ENSUMAG00000021242	GLIPR1L2 (ENSUMAG00000021237) #32	GLIPR1L1 (ENSUMAG00000021232) #31	ENSUMAG00000021228 #33	KCNC2 (ENSUMAG00000021219) #34	ENSUMAG00000021205	ATXN7L3B (ENSUMAG00000021202) #35
American black bear	DUPLICATION
American black bear	MODERN SPECIES	1323																ENSUAMG00000027982 #22	ENSUAMG00000027981 #22
American black bear	MODERN SPECIES	1323															ENSUAMG00000027982 #22	ENSUAMG00000027981 #22
Giant Panda	MODERN SPECIES	6	TMTC2 (ENSAMEG00000016881) #8	METTL25 (ENSAMEG00000016877) #9	CCDC59 (ENSAMEG00000016875) #10	PPFIA2 (ENSAMEG00000013096) #11	ACSS3 (ENSAMEG00000013162) #12	LIN7A (ENSAMEG00000013191) #13	MYF5 (ENSAMEG00000013193) #14	MYF6 (ENSAMEG00000027013) #15	PTPRQ (ENSAMEG00000013219) #16	OTOGL (ENSAMEG00000013267) #17	PPP1R12A (ENSAMEG00000013280) #18	PAWR (ENSAMEG00000013370) #19	SYT1 (ENSAMEG00000013376) #20	NAV3 (ENSAMEG00000006673) #21	ENSAMEG00000024301	E2F7 (ENSAMEG00000007247) #22	CSRP2 (ENSAMEG00000006632) #23	ZDHHC17 (ENSAMEG00000006600) #24	OSBPL8 (ENSAMEG00000006513) #25	BBS10 (ENSAMEG00000006510) #26	NAP1L1 (ENSAMEG00000006463) #27	PHLDA1 (ENSAMEG00000006460) #28	KRR1 (ENSAMEG00000006437) #29	GLIPR1 (ENSAMEG00000006427) #30	GLIPR1L2 (ENSAMEG00000006424) #32	GLIPR1L1 (ENSAMEG00000006420) #31	CAPS2 (ENSAMEG00000006378) #33	KCNC2 (ENSAMEG00000000555) #34	ENSAMEG00000030227	ATXN7L3B (ENSAMEG00000018742) #35	TRHDE (ENSAMEG00000000316) #37
Mustelinae	ANCESTRAL SPECIES	4	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215.b.a #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Ferret	MODERN SPECIES	196					ENSMPUG00000017457	ENSMPUG00000017458	OTOGL (ENSMPUG00000017459) #17	PPP1R12A (ENSMPUG00000017460) #18	ENSMPUG00000017461	PAWR (ENSMPUG00000017462) #19	SYT1 (ENSMPUG00000017463) #20	ENSMPUG00000017464	NAV3 (ENSMPUG00000017465) #21	ENSMPUG00000017466	ENSMPUG00000017467	E2F7 (ENSMPUG00000017468) #22	CSRP2 (ENSMPUG00000017469) #23	ZDHHC17 (ENSMPUG00000017470) #24	ENSMPUG00000017471	OSBPL8 (ENSMPUG00000017472) #25	BBS10 (ENSMPUG00000017473) #26	NAP1L1 (ENSMPUG00000017474) #27	KRR1 (ENSMPUG00000017475) #29	GLIPR1 (ENSMPUG00000017476) #30	GLIPR1L2 (ENSMPUG00000017477) #32	ENSMPUG00000017478 #31	CAPS2 (ENSMPUG00000017479) #33	KCNC2 (ENSMPUG00000017480) #34	ENSMPUG00000017481 #35	TRHDE (ENSMPUG00000017482) #37	TPH2 (ENSMPUG00000017483)
American mink	MODERN SPECIES	22	METTL25 (ENSNVIG00000000819) #9	TAP26 (ENSNVIG00000000828) #10	PPFIA2 (ENSNVIG00000000848) #11	ACSS3 (ENSNVIG00000001229) #12	LIN7A (ENSNVIG00000001269) #13	MYF5 (ENSNVIG00000001283) #14	MYF6 (ENSNVIG00000001298) #15	PTPRQ (ENSNVIG00000001320) #16	OTOGL (ENSNVIG00000001579) #17	ENSNVIG00000001919	PPP1R12A (ENSNVIG00000001940) #18	PAWR (ENSNVIG00000002283) #19	SYT1 (ENSNVIG00000002313) #20	ENSNVIG00000002371	NAV3 (ENSNVIG00000002412) #21	E2F7 (ENSNVIG00000002695) #22	ENSNVIG00000002763 #23	ZDHHC17 (ENSNVIG00000002801) #24	OSBPL8 (ENSNVIG00000002847) #25	BBS10 (ENSNVIG00000003073) #26	ENSNVIG00000003110 #27	ENSNVIG00000003475	PHLDA1 (ENSNVIG00000003490) #28	KRR1 (ENSNVIG00000003506) #29	GLIPR1 (ENSNVIG00000003537) #30	ENSNVIG00000003558 #32	GLIPR1L1 (ENSNVIG00000003573) #31	CAPS2 (ENSNVIG00000003600) #33	KCNC2 (ENSNVIG00000003636) #34	ATXN7L3B (ENSNVIG00000003667) #35
Canidae	ANCESTRAL SPECIES	12	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000005922.b.d.b.a.j	ENSGT00390000018775 #29	ENSGT00940000163058	ENSGT00940000163275	ENSGT00940000162245	ENSGT00550000075058	ENSGT00940000154888.e.a	ENSGT00940000153886.a.a.k	ENSGT00940000153649.B
Canis_lupus	DUPLICATION
Canis_lupus	ANCESTRAL SPECIES	16	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000158890.p.a.f	ENSGT00940000157713.q #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00940000154612.m.a.g.a.b	ENSGT00390000005922.b.d.b.a.j	ENSGT00390000018775 #29	ENSGT00940000163058	ENSGT00940000163275	ENSGT00940000162245	ENSGT00550000075058	ENSGT00940000154888.e.a	ENSGT00940000153886.a.a.k
Dog	MODERN SPECIES	6	CCDC59 (ENSCAFG00845011151) #10	PPFIA2 (ENSCAFG00845010311) #11	ACSS3 (ENSCAFG00845009887) #12	LIN7A (ENSCAFG00845009762) #13	ENSCAFG00845009734 #14	MYF6 (ENSCAFG00845009704) #15	PTPRQ (ENSCAFG00845008887) #16	OTOGL (ENSCAFG00845008423) #17	ENSCAFG00845008343	ENSCAFG00845008317	PPP1R12A (ENSCAFG00845007952) #18	PAWR (ENSCAFG00845007786) #19	SYT1 (ENSCAFG00845007651) #20	NAV3 (ENSCAFG00845007345) #21	ENSCAFG00845007259	E2F7 (ENSCAFG00845006897) #22	ENSCAFG00845006746 #23	ZDHHC17 (ENSCAFG00845006644) #24	OSBPL8 (ENSCAFG00845006249) #25	OSBPL8 (ENSCAFG00845006103) #26	ENSCAFG00845006055	NAP1L1 (ENSCAFG00845005932) #27	ENSCAFG00845005752 #28	ENSCAFG00845027430	ENSCAFG00845027179 #29	OR4E1 (ENSCAFG00845027061)	OR4E2 (ENSCAFG00845026975)	SALL2 (ENSCAFG00845026880)	METTL3 (ENSCAFG00845026804)	TOX4 (ENSCAFG00845026715)	RAB2B (ENSCAFG00845026579)
Dingo	MODERN SPECIES	277	CCDC59 (ENSCAFG00020016153) #10	PPFIA2 (ENSCAFG00020016113) #11	ACSS3 (ENSCAFG00020016033) #12	LIN7A (ENSCAFG00020016013) #13	MYF5 (ENSCAFG00020016010) #14	MYF6 (ENSCAFG00020016005) #15	PTPRQ (ENSCAFG00020015957) #16	OTOGL (ENSCAFG00020015840) #17	PPP1R12A (ENSCAFG00020015626) #18	PAWR (ENSCAFG00020015607) #19	SYT1 (ENSCAFG00020015603) #20	ENSCAFG00020015601	NAV3 (ENSCAFG00020015546) #21	ENSCAFG00020015535	ENSCAFG00020015528	ENSCAFG00020015522 #22	ENSCAFG00020015518 #22	CSRP2 (ENSCAFG00020015512) #23	ZDHHC17 (ENSCAFG00020015453) #24	OSBPL8 (ENSCAFG00020015356) #25	BBS10 (ENSCAFG00020015335) #26	NAP1L1 (ENSCAFG00020015328) #27	ENSCAFG00020015316 #28	ENSCAFG00020015310	ENSCAFG00020015296	KRR1 (ENSCAFG00020015286) #29	OR4E1 (ENSCAFG00020015285)	OR4E2 (ENSCAFG00020015283)	SALL2 (ENSCAFG00020015273)	METTL3 (ENSCAFG00020015265)	ENSCAFG00020015261
Canis_lupus	ANCESTRAL SPECIES																	ENSGT00940000157713.r #22
Dingo	MODERN SPECIES	277	PPFIA2 (ENSCAFG00020016113) #11	ACSS3 (ENSCAFG00020016033) #12	LIN7A (ENSCAFG00020016013) #13	MYF5 (ENSCAFG00020016010) #14	MYF6 (ENSCAFG00020016005) #15	PTPRQ (ENSCAFG00020015957) #16	OTOGL (ENSCAFG00020015840) #17	PPP1R12A (ENSCAFG00020015626) #18	PAWR (ENSCAFG00020015607) #19	SYT1 (ENSCAFG00020015603) #20	ENSCAFG00020015601	NAV3 (ENSCAFG00020015546) #21	ENSCAFG00020015535	ENSCAFG00020015528	ENSCAFG00020015522 #22	ENSCAFG00020015518 #22	CSRP2 (ENSCAFG00020015512) #23	ZDHHC17 (ENSCAFG00020015453) #24	OSBPL8 (ENSCAFG00020015356) #25	BBS10 (ENSCAFG00020015335) #26	NAP1L1 (ENSCAFG00020015328) #27	ENSCAFG00020015316 #28	ENSCAFG00020015310	ENSCAFG00020015296	KRR1 (ENSCAFG00020015286) #29	OR4E1 (ENSCAFG00020015285)	OR4E2 (ENSCAFG00020015283)	SALL2 (ENSCAFG00020015273)	METTL3 (ENSCAFG00020015265)	ENSCAFG00020015261	ENSCAFG00020015235
Red fox	MODERN SPECIES	9	METTL25 (ENSVVUG00000010971) #9	CCDC59 (ENSVVUG00000010954) #10	ENSVVUG00000010950	PPFIA2 (ENSVVUG00000010745) #11	ACSS3 (ENSVVUG00000010570) #12	LIN7A (ENSVVUG00000010554) #13	ENSVVUG00000010537 #14	MYF6 (ENSVVUG00000010529) #15	PTPRQ (ENSVVUG00000010403) #16	ENSVVUG00000010366	OTOGL (ENSVVUG00000010103) #17	PPP1R12A (ENSVVUG00000010043) #18	PAWR (ENSVVUG00000010028) #19	SYT1 (ENSVVUG00000009998) #20	NAV3 (ENSVVUG00000009882) #21	E2F7 (ENSVVUG00000009839) #22	CSRP2 (ENSVVUG00000009828) #23	ZDHHC17 (ENSVVUG00000009811) #24	OSBPL8 (ENSVVUG00000009692) #25	BBS10 (ENSVVUG00000009650) #26	NAP1L1 (ENSVVUG00000009610) #27	ENSVVUG00000009581	KRR1 (ENSVVUG00000009566) #29	OR4E1 (ENSVVUG00000009561)	OR4E2 (ENSVVUG00000009557)	ENSVVUG00000009540	METTL3 (ENSVVUG00000009513)	TOX4 (ENSVVUG00000009505)	RAB2B (ENSVVUG00000009502)	CHD8 (ENSVVUG00000009444)	SUPT16H (ENSVVUG00000009434)
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576.g #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Panthera	ANCESTRAL SPECIES		ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576.g #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Tiger	MODERN SPECIES	285					PPFIA2 (ENSPTIG00000008257) #11	ACSS3 (ENSPTIG00000013083) #12	LIN7A (ENSPTIG00000013465) #13	MYF5 (ENSPTIG00000013849) #14	MYF6 (ENSPTIG00000014009) #15	PTPRQ (ENSPTIG00000014182) #16	OTOGL (ENSPTIG00000017536) #17	PPP1R12A (ENSPTIG00000003820) #18	PAWR (ENSPTIG00000012722) #19	SYT1 (ENSPTIG00000013094) #20	NAV3 (ENSPTIG00000013673) #21	E2F7 (ENSPTIG00000016920) #22	CSRP2 (ENSPTIG00000019308) #23	ZDHHC17 (ENSPTIG00000019755) #24	OSBPL8 (ENSPTIG00000019983) #25	BBS10 (ENSPTIG00000020383) #26	NAP1L1 (ENSPTIG00000003186) #27	KRR1 (ENSPTIG00000009202) #29	GLIPR1 (ENSPTIG00000010519) #30	GLIPR1L2 (ENSPTIG00000011160) #32	GLIPR1L1 (ENSPTIG00000011807) #31	CAPS2 (ENSPTIG00000012593) #33	ENSPTIG00000013059 #34	ATXN7L3B (ENSPTIG00000004593) #35
Panthera_a	ANCESTRAL SPECIES	12	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576.g #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
leopard	MODERN SPECIES	27	METTL25 (ENSPPRG00000020885) #9	CCDC59 (ENSPPRG00000022500) #10	ENSPPRG00000024977	PPFIA2 (ENSPPRG00000001816) #11	ACSS3 (ENSPPRG00000003248) #12	LIN7A (ENSPPRG00000003439) #13	MYF5 (ENSPPRG00000003820) #14	MYF6 (ENSPPRG00000003909) #15	PTPRQ (ENSPPRG00000005300) #16	OTOGL (ENSPPRG00000007761) #17	PPP1R12A (ENSPPRG00000012756) #18	ENSPPRG00000013642	PAWR (ENSPPRG00000013959) #19	SYT1 (ENSPPRG00000014210) #20	NAV3 (ENSPPRG00000022007) #21	E2F7 (ENSPPRG00000024442) #22	CSRP2 (ENSPPRG00000024205) #23	ZDHHC17 (ENSPPRG00000024071) #24	ENSPPRG00000023878	OSBPL8 (ENSPPRG00000023047) #25	BBS10 (ENSPPRG00000022774) #26	ENSPPRG00000000117	NAP1L1 (ENSPPRG00000001906) #27	ENSPPRG00000002277	KRR1 (ENSPPRG00000002897) #29	GLIPR1 (ENSPPRG00000003347) #30	GLIPR1L2 (ENSPPRG00000003609) #32	GLIPR1L1 (ENSPPRG00000004020) #31	CAPS2 (ENSPPRG00000004169) #33	ENSPPRG00000004904 #34	KCNC2 (ENSPPRG00000006532) #34
lion	MODERN SPECIES	7	TMTC2 (ENSPLOG00000004411) #8	METTL25 (ENSPLOG00000004346) #9	CCDC59 (ENSPLOG00000004335) #10	PPFIA2 (ENSPLOG00000003973) #11	ACSS3 (ENSPLOG00000003703) #12	LIN7A (ENSPLOG00000003686) #13	MYF5 (ENSPLOG00000003675) #14	MYF6 (ENSPLOG00000003667) #15	PTPRQ (ENSPLOG00000003543) #16	OTOGL (ENSPLOG00000003151) #17	PPP1R12A (ENSPLOG00000002780) #18	PAWR (ENSPLOG00000002686) #19	SYT1 (ENSPLOG00000002662) #20	ENSPLOG00000002650	NAV3 (ENSPLOG00000002454) #21	E2F7 (ENSPLOG00000002314) #22	CSRP2 (ENSPLOG00000002279) #23	ZDHHC17 (ENSPLOG00000002249) #24	OSBPL8 (ENSPLOG00000002092) #25	BBS10 (ENSPLOG00000002053) #26	NAP1L1 (ENSPLOG00000001982) #27	PHLDA1 (ENSPLOG00000001933) #28	KRR1 (ENSPLOG00000001901) #29	GLIPR1 (ENSPLOG00000001884) #30	GLIPR1L2 (ENSPLOG00000001854) #32	GLIPR1L1 (ENSPLOG00000001832) #31	CAPS2 (ENSPLOG00000001806) #33	KCNC2 (ENSPLOG00000001773) #34	ENSPLOG00000001747 #35	ENSPLOG00000001740	ENSPLOG00000001713 #37
Cat	MODERN SPECIES	238	ENSFCAG00000035513	METTL25 (ENSFCAG00000013377) #9	CCDC59 (ENSFCAG00000028462) #10	PPFIA2 (ENSFCAG00000012993) #11	ACSS3 (ENSFCAG00000012992) #12	LIN7A (ENSFCAG00000015014) #13	MYF5 (ENSFCAG00000015011) #14	MYF6 (ENSFCAG00000015010) #15	PTPRQ (ENSFCAG00000026313) #16	OTOGL (ENSFCAG00000022141) #17	PPP1R12A (ENSFCAG00000027965) #18	PAWR (ENSFCAG00000026300) #19	SYT1 (ENSFCAG00000024865) #20	ENSFCAG00000048215	NAV3 (ENSFCAG00000013128) #21	E2F7 (ENSFCAG00000010756) #22	CSRP2 (ENSFCAG00000006548) #23	ZDHHC17 (ENSFCAG00000027034) #24	OSBPL8 (ENSFCAG00000027470) #25	NAP1L1 (ENSFCAG00000000279) #27	PHLDA1 (ENSFCAG00000032023) #28	ENSFCAG00000050261	KRR1 (ENSFCAG00000025788) #29	GLIPR1 (ENSFCAG00000005203) #30	GLIPR1L2 (ENSFCAG00000036590) #32	ENSFCAG00000041131 #31	ENSFCAG00000047626	CAPS2 (ENSFCAG00000040419) #33	KCNC2 (ENSFCAG00000024443) #34	ENSFCAG00000028757 #35	ENSFCAG00000050848
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Equus	ANCESTRAL SPECIES	21	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Donkey	MODERN SPECIES	11	METTL25 (ENSEASG00005021236) #9	CCDC59 (ENSEASG00005021237) #10	ENSEASG00005011113	PPFIA2 (ENSEASG00005021241) #11	ACSS3 (ENSEASG00005021261) #12	ENSEASG00005024557	LIN7A (ENSEASG00005021265) #13	MYF5 (ENSEASG00005021266) #14	MYF6 (ENSEASG00005021268) #15	PTPRQ (ENSEASG00005021271) #16	OTOGL (ENSEASG00005021304) #17	PPP1R12A (ENSEASG00005021353) #18	PAWR (ENSEASG00005033077) #19	SYT1 (ENSEASG00005021375) #20	NAV3 (ENSEASG00005021551) #21	E2F7 (ENSEASG00005021935) #22	ENSEASG00005021936 #23	ZDHHC17 (ENSEASG00005021939) #24	OSBPL8 (ENSEASG00005021942) #25	BBS10 (ENSEASG00005021945) #26	NAP1L1 (ENSEASG00005021946) #27	PHLDA1 (ENSEASG00005027836) #28	KRR1 (ENSEASG00005021952) #29	GLIPR1 (ENSEASG00005024066) #30	GLIPR1L2 (ENSEASG00005021956) #32	GLIPR1L1 (ENSEASG00005032803) #31	CAPS2 (ENSEASG00005021957) #33	KCNC2 (ENSEASG00005021959) #34	ATXN7L3B (ENSEASG00005030269) #35	TRHDE (ENSEASG00005021964) #37	TPH2 (ENSEASG00005021971)
Horse	MODERN SPECIES	20	TSPAN19 (ENSECAG00000037294)	SLC6A15 (ENSECAG00000018897) #7	TMTC2 (ENSECAG00000014638) #8	METTL25 (ENSECAG00000010894) #9	CCDC59 (ENSECAG00000010450) #10	PPFIA2 (ENSECAG00000011682) #11	ACSS3 (ENSECAG00000008242) #12	LIN7A (ENSECAG00000002823) #13	MYF5 (ENSECAG00000020047) #15	PTPRQ (ENSECAG00000013221) #16	OTOGL (ENSECAG00000009954) #17	PPP1R12A (ENSECAG00000020406) #18	PAWR (ENSECAG00000019505) #19	SYT1 (ENSECAG00000012832) #20	NAV3 (ENSECAG00000000121) #21	E2F7 (ENSECAG00000017963) #22	CSRP2 (ENSECAG00000015606) #23	ZDHHC17 (ENSECAG00000006626) #24	ENSECAG00000058140	OSBPL8 (ENSECAG00000015542) #25	BBS10 (ENSECAG00000015525) #26	NAP1L1 (ENSECAG00000000066) #27	ENSECAG00000001900	KRR1 (ENSECAG00000017498) #29	GLIPR1 (ENSECAG00000015687) #30	ENSECAG00000054232	ENSECAG00000053308	ENSECAG00000029754	GLIPR1L2 (ENSECAG00000049297) #32	GLIPR1L1 (ENSECAG00000015592) #31	CAPS2 (ENSECAG00000011231) #33
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00940000167051	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00940000167051	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Greater horseshoe bat	MODERN SPECIES	1	ENSRFEG00010014611	TMTC2 (ENSRFEG00010014525) #8	METTL25 (ENSRFEG00010014462) #9	CCDC59 (ENSRFEG00010014412) #10	PPFIA2 (ENSRFEG00010011014) #11	ACSS3 (ENSRFEG00010010509) #12	LIN7A (ENSRFEG00010010463) #13	MYF5 (ENSRFEG00010010395) #14	MYF6 (ENSRFEG00010010368) #15	PTPRQ (ENSRFEG00010009562) #16	OTOGL (ENSRFEG00010007970) #17	PPP1R12A (ENSRFEG00010007686) #18	PAWR (ENSRFEG00010007574) #19	SYT1 (ENSRFEG00010007403) #20	NAV3 (ENSRFEG00010006668) #21	E2F7 (ENSRFEG00010006442) #22	CSRP2 (ENSRFEG00010006389) #23	ZDHHC17 (ENSRFEG00010006316) #24	OSBPL8 (ENSRFEG00010006253) #25	BBS10 (ENSRFEG00010004681) #26	NAP1L1 (ENSRFEG00010004645) #27	ENSRFEG00010004601	ENSRFEG00010004593 #29	GLIPR1 (ENSRFEG00010004575) #30	GLIPR1L2 (ENSRFEG00010004536) #32	GLIPR1L1 (ENSRFEG00010004502) #31	CAPS2 (ENSRFEG00010004481) #33	KCNC2 (ENSRFEG00010004462) #34	ENSRFEG00010004445	TRHDE (ENSRFEG00010004421) #37	TPH2 (ENSRFEG00010004392)
Microbat	MODERN SPECIES	946	TMTC2 (ENSMLUG00000010233) #8	METTL25 (ENSMLUG00000008084) #9	CCDC59 (ENSMLUG00000008071) #10	PPFIA2 (ENSMLUG00000001537) #11	ACSS3 (ENSMLUG00000001527) #12	LIN7A (ENSMLUG00000001526) #13	MYF5 (ENSMLUG00000004943) #14	MYF6 (ENSMLUG00000004940) #15	PTPRQ (ENSMLUG00000006091) #16	OTOGL (ENSMLUG00000005553) #17	PPP1R12A (ENSMLUG00000005477) #18	ENSMLUG00000005757 #19	SYT1 (ENSMLUG00000005752) #20	ENSMLUG00000027140	NAV3 (ENSMLUG00000010374) #21	E2F7 (ENSMLUG00000012116) #22	CSRP2 (ENSMLUG00000002384) #23	ZDHHC17 (ENSMLUG00000002375) #24	ENSMLUG00000003587	ENSMLUG00000029930	OSBPL8 (ENSMLUG00000005046) #25	BBS10 (ENSMLUG00000001850) #26	NAP1L1 (ENSMLUG00000029307) #27
Megabat	MODERN SPECIES	1983																E2F7 (ENSPVAG00000000288) #22
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Suina	ANCESTRAL SPECIES	4	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Chacoan peccary	MODERN SPECIES	871		TMTC2 (ENSCWAG00000013168) #8	METTL25 (ENSCWAG00000013127) #9	CCDC59 (ENSCWAG00000013098) #10	PPFIA2 (ENSCWAG00000010523) #11	ACSS3 (ENSCWAG00000010300) #12	LIN7A (ENSCWAG00000010238) #13	MYF5 (ENSCWAG00000010199) #14	MYF6 (ENSCWAG00000010168) #15	PTPRQ (ENSCWAG00000009402) #16	OTOGL (ENSCWAG00000007720) #17	PPP1R12A (ENSCWAG00000007564) #18	PAWR (ENSCWAG00000007454) #19	SYT1 (ENSCWAG00000007382) #20	NAV3 (ENSCWAG00000006671) #21	E2F7 (ENSCWAG00000006403) #22	CSRP2 (ENSCWAG00000006361) #23	ZDHHC17 (ENSCWAG00000006304) #24	OSBPL8 (ENSCWAG00000006143) #25	BBS10 (ENSCWAG00000006105) #26	NAP1L1 (ENSCWAG00000005937) #27	PHLDA1 (ENSCWAG00000005900) #28	ENSCWAG00000005880	KRR1 (ENSCWAG00000005721) #29	GLIPR1 (ENSCWAG00000005686) #30	GLIPR1L2 (ENSCWAG00000005529) #32	GLIPR1L1 (ENSCWAG00000005477) #31	CAPS2 (ENSCWAG00000005425) #33	KCNC2 (ENSCWAG00000005315) #34	ATXN7L3B (ENSCWAG00000005294) #35	ENSCWAG00000005273
Pig	MODERN SPECIES	13	PPFIA2 (ENSSSCG00000000940) #11	ACSS3 (ENSSSCG00000000939) #12	LIN7A (ENSSSCG00000040348) #13	ENSSSCG00000042719	MYF5 (ENSSSCG00000000937) #14	MYF6 (ENSSSCG00000026533) #15	PTPRQ (ENSSSCG00000031716) #16	OTOGL (ENSSSCG00000000943) #17	PPP1R12A (ENSSSCG00000038973) #18	PAWR (ENSSSCG00000036560) #19	SYT1 (ENSSSCG00000000948) #20	ENSSSCG00000049637	ENSSSCG00000052129	NAV3 (ENSSSCG00000029249) #21	ENSSSCG00000044299	E2F7 (ENSSSCG00000000950) #22	ENSSSCG00000043521	CSRP2 (ENSSSCG00000000951) #23	ZDHHC17 (ENSSSCG00000000952) #24	ENSSSCG00000025041
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000154172.ab.b	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000014572.eb.b	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000154172.ab.b	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000014572.eb.b	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000154172.ab.b	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000014572.eb.b	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000154172.ab.b	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000014572.eb.b	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000154172.ab.b	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00940000154980.bb.a #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000014572.eb.b	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Beluga whale	DUPLICATION
Beluga whale	MODERN SPECIES	39			PPFIA2 (ENSDLEG00000005438) #11	ACSS3 (ENSDLEG00000005911) #12	LIN7A (ENSDLEG00000005973) #13	MYF5 (ENSDLEG00000006018) #14	MYF6 (ENSDLEG00000006023) #15	PTPRQ (ENSDLEG00000006066) #16	OTOGL (ENSDLEG00000006234) #17	PPP1R12A (ENSDLEG00000006433) #18	ENSDLEG00000006442	PAWR (ENSDLEG00000006445) #19	ENSDLEG00000006452	SYT1 (ENSDLEG00000006456) #20	NAV3 (ENSDLEG00000006608) #21	ENSDLEG00000007322 #22	ENSDLEG00000007329 #22	CSRP2 (ENSDLEG00000007353) #23	ZDHHC17 (ENSDLEG00000007362) #24	ENSDLEG00000007371	OSBPL8 (ENSDLEG00000007401) #25	BBS10 (ENSDLEG00000007426) #26	ENSDLEG00000007438 #27	PHLDA1 (ENSDLEG00000007521) #28	ENSDLEG00000007528	KRR1 (ENSDLEG00000007544) #29	GLIPR1 (ENSDLEG00000007560) #30	GLIPR1L2 (ENSDLEG00000000224) #32	KCNC2 (ENSDLEG00000000278) #34	ATXN7L3B (ENSDLEG00000000389) #35	ENSDLEG00000000403
Beluga whale	MODERN SPECIES	39		PPFIA2 (ENSDLEG00000005438) #11	ACSS3 (ENSDLEG00000005911) #12	LIN7A (ENSDLEG00000005973) #13	MYF5 (ENSDLEG00000006018) #14	MYF6 (ENSDLEG00000006023) #15	PTPRQ (ENSDLEG00000006066) #16	OTOGL (ENSDLEG00000006234) #17	PPP1R12A (ENSDLEG00000006433) #18	ENSDLEG00000006442	PAWR (ENSDLEG00000006445) #19	ENSDLEG00000006452	SYT1 (ENSDLEG00000006456) #20	NAV3 (ENSDLEG00000006608) #21	ENSDLEG00000007322 #22	ENSDLEG00000007329 #22	CSRP2 (ENSDLEG00000007353) #23	ZDHHC17 (ENSDLEG00000007362) #24	ENSDLEG00000007371	OSBPL8 (ENSDLEG00000007401) #25	BBS10 (ENSDLEG00000007426) #26	ENSDLEG00000007438 #27	PHLDA1 (ENSDLEG00000007521) #28	ENSDLEG00000007528	KRR1 (ENSDLEG00000007544) #29	GLIPR1 (ENSDLEG00000007560) #30	GLIPR1L2 (ENSDLEG00000000224) #32	KCNC2 (ENSDLEG00000000278) #34	ATXN7L3B (ENSDLEG00000000389) #35	ENSDLEG00000000403	TRHDE (ENSDLEG00000000423) #37
Narwhal	MODERN SPECIES	313	CCDC59 (ENSMMNG00015020720) #10	PPFIA2 (ENSMMNG00015020218) #11	ACSS3 (ENSMMNG00015019853) #12	ENSMMNG00015019830	LIN7A (ENSMMNG00015019774) #13	MYF5 (ENSMMNG00015019736) #14	MYF6 (ENSMMNG00015019715) #15	PTPRQ (ENSMMNG00015019359) #16	OTOGL (ENSMMNG00015018567) #17	ENSMMNG00015018420	PPP1R12A (ENSMMNG00015018194) #18	ENSMMNG00015018085	PAWR (ENSMMNG00015018035) #19	SYT1 (ENSMMNG00015017994) #20	NAV3 (ENSMMNG00015017728) #21	E2F7 (ENSMMNG00015017553) #22	CSRP2 (ENSMMNG00015017494) #23	ENSMMNG00015017474	ZDHHC17 (ENSMMNG00015017285) #24	OSBPL8 (ENSMMNG00015017163) #25	BBS10 (ENSMMNG00015017120) #26	NAP1L1 (ENSMMNG00015016626) #27	PHLDA1 (ENSMMNG00015016497) #28	ENSMMNG00015016472	KRR1 (ENSMMNG00015016424) #29	GLIPR1 (ENSMMNG00015016368) #30	GLIPR1L2 (ENSMMNG00015016289) #32	KCNC2 (ENSMMNG00015016164) #34	ATXN7L3B (ENSMMNG00015016119) #35	ENSMMNG00015016102	TRHDE (ENSMMNG00015016061) #37
Vaquita	MODERN SPECIES	1	METTL25 (ENSPSNG00000005420) #9	ENSPSNG00000005450 #10	PPFIA2 (ENSPSNG00000005685) #11	ACSS3 (ENSPSNG00000006403) #12	LIN7A (ENSPSNG00000006484) #13	MYF5 (ENSPSNG00000006510) #14	MYF6 (ENSPSNG00000006531) #15	PTPRQ (ENSPSNG00000006652) #16	OTOGL (ENSPSNG00000007188) #17	PPP1R12A (ENSPSNG00000008207) #18	ENSPSNG00000008403	PAWR (ENSPSNG00000008439) #19	SYT1 (ENSPSNG00000008513) #20	ENSPSNG00000008562	NAV3 (ENSPSNG00000009074) #21	E2F7 (ENSPSNG00000010547) #22	CSRP2 (ENSPSNG00000010823) #23	ZDHHC17 (ENSPSNG00000010872) #24	ENSPSNG00000010920	ENSPSNG00000010941	OSBPL8 (ENSPSNG00000010975) #25	BBS10 (ENSPSNG00000011255) #26	ENSPSNG00000011336 #27	ENSPSNG00000011534	ENSPSNG00000011566	KRR1 (ENSPSNG00000011619) #29	GLIPR1 (ENSPSNG00000011694) #30	ENSPSNG00000011741 #32	ENSPSNG00000011783 #33	KCNC2 (ENSPSNG00000011897) #34	ENSPSNG00000012078
Dolphin	MODERN SPECIES	5125																E2F7 (ENSTTRG00000000110) #22
Sperm whale	MODERN SPECIES	17	ENSPCTG00005020220	METTL25 (ENSPCTG00005020146) #9	CCDC59 (ENSPCTG00005020122) #10	PPFIA2 (ENSPCTG00005017124) #11	ACSS3 (ENSPCTG00005016578) #12	LIN7A (ENSPCTG00005016469) #13	MYF5 (ENSPCTG00005016429) #14	MYF6 (ENSPCTG00005016374) #15	PTPRQ (ENSPCTG00005015293) #16	OTOGL (ENSPCTG00005013033) #17	ENSPCTG00005012953	PPP1R12A (ENSPCTG00005012575) #18	PAWR (ENSPCTG00005012474) #19	SYT1 (ENSPCTG00005012311) #20	NAV3 (ENSPCTG00005010415) #21	E2F7 (ENSPCTG00005009995) #22	CSRP2 (ENSPCTG00005009938) #23	ZDHHC17 (ENSPCTG00005009874) #24	OSBPL8 (ENSPCTG00005009709) #25	BBS10 (ENSPCTG00005009666) #26	ENSPCTG00005009647	ENSPCTG00005009623	NAP1L1 (ENSPCTG00005009406) #27	PHLDA1 (ENSPCTG00005009371) #28	ENSPCTG00005009342	KRR1 (ENSPCTG00005009253) #29	GLIPR1 (ENSPCTG00005009154) #30	GLIPR1L2 (ENSPCTG00005008930) #32	GLIPR1L1 (ENSPCTG00005008822) #31	CAPS2 (ENSPCTG00005008725) #33	KCNC2 (ENSPCTG00005008582) #34
Blue whale	MODERN SPECIES	1	CCDC59 (ENSBMSG00010008631) #10	PPFIA2 (ENSBMSG00010007808) #11	ACSS3 (ENSBMSG00010007621) #12	ENSBMSG00010007609	LIN7A (ENSBMSG00010007592) #13	MYF5 (ENSBMSG00010007571) #14	MYF6 (ENSBMSG00010007564) #15	PTPRQ (ENSBMSG00010007468) #16	OTOGL (ENSBMSG00010021255) #17	ENSBMSG00010021208	PPP1R12A (ENSBMSG00010021198) #18	PAWR (ENSBMSG00010021183) #19	SYT1 (ENSBMSG00010021177) #20	ENSBMSG00010021165	NAV3 (ENSBMSG00010021020) #21	E2F7 (ENSBMSG00010020948) #22	CSRP2 (ENSBMSG00010020929) #23	ZDHHC17 (ENSBMSG00010020913) #24	OSBPL8 (ENSBMSG00010020883) #25	BBS10 (ENSBMSG00010020864) #26	NAP1L1 (ENSBMSG00010020766) #27	PHLDA1 (ENSBMSG00010020734) #28	ENSBMSG00010020727	KRR1 (ENSBMSG00010020702) #29	GLIPR1 (ENSBMSG00010020669) #30	GLIPR1L2 (ENSBMSG00010020577) #32	GLIPR1L1 (ENSBMSG00010020548) #31	CAPS2 (ENSBMSG00010020525) #33	KCNC2 (ENSBMSG00010020489) #34	TRHDE (ENSBMSG00010020456) #37	TPH2 (ENSBMSG00010020429)
Pecora	ANCESTRAL SPECIES	3	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Percora_a	ANCESTRAL SPECIES	3	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Bovidae	ANCESTRAL SPECIES	3	ENSGT00390000013187.b	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00390000012446.o.b	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb.b #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Caprinae	ANCESTRAL SPECIES		ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT00390000013187.b	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a.n #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb.b #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Goat	MODERN SPECIES	24	ENSCHIG00000005384	PPFIA2 (ENSCHIG00000022919) #11	ACSS3 (ENSCHIG00000023281) #12	LIN7A (ENSCHIG00000003123) #13	MYF5 (ENSCHIG00000015029) #14	MYF6 (ENSCHIG00000021667) #15	PTPRQ (ENSCHIG00000026657) #16	OTOGL (ENSCHIG00000001357) #17	PPP1R12A (ENSCHIG00000007263) #18	PAWR (ENSCHIG00000014049) #19	SYT1 (ENSCHIG00000027174) #20	ENSCHIG00000020619	NAV3 (ENSCHIG00000012255) #21	ENSCHIG00000009714	ENSCHIG00000017418	E2F7 (ENSCHIG00000023455) #22	CSRP2 (ENSCHIG00000025767) #23	ZDHHC17 (ENSCHIG00000009471) #24	OSBPL8 (ENSCHIG00000010416) #25	BBS10 (ENSCHIG00000016567) #26	PHLDA1 (ENSCHIG00000005054) #28	KRR1 (ENSCHIG00000018496) #29	GLIPR1 (ENSCHIG00000024224) #30	ENSCHIG00000010162 #32	ENSCHIG00000017904 #31	CAPS2 (ENSCHIG00000023572) #33	ENSCHIG00000011941 #34	ENSCHIG00000018503 #34	ATXN7L3B (ENSCHIG00000009745) #35	ENSCHIG00000009502	ENSCHIG00000012666
Rambouillet Sheep	MODERN SPECIES	19	TSPAN19 (ENSOARG00020007275)	SLC6A15 (ENSOARG00020007201) #7	TMTC2 (ENSOARG00020015711) #8	CCDC59 (ENSOARG00020015621) #10	PPFIA2 (ENSOARG00020009934) #11	ACSS3 (ENSOARG00020009124) #12	LIN7A (ENSOARG00020009053) #13	MYF5 (ENSOARG00020009026) #14	MYF6 (ENSOARG00020008989) #15	MYF6 (ENSOARG00020008943) #15	PTPRQ (ENSOARG00020008080) #16	PPP1R12A (ENSOARG00020005817) #18	PAWR (ENSOARG00020005665) #19	SYT1 (ENSOARG00020005626) #20	NAV3 (ENSOARG00020003813) #21	E2F7 (ENSOARG00020003529) #22	CSRP2 (ENSOARG00020003468) #23	ZDHHC17 (ENSOARG00020003403) #24	ENSOARG00020003381	BBS10 (ENSOARG00020003354) #26	OSBPL8 (ENSOARG00020003030) #25	ENSOARG00020002933 #27	PHLDA1 (ENSOARG00020002913) #28	KRR1 (ENSOARG00020002893) #29	GLIPR1 (ENSOARG00020002870) #30	ENSOARG00020002828	GLIPR1L1 (ENSOARG00020002811) #31	CAPS2 (ENSOARG00020002788) #33	KCNC2 (ENSOARG00020002747) #34	ATXN7L3B (ENSOARG00020002735) #35	ENSOARG00020002731
Bovinae	ANCESTRAL SPECIES	17	ENSGT00390000013187.b	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00390000012446.o.b	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb.b.b #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Bos	ANCESTRAL SPECIES	2	ENSGT00390000003710.c.a.b.b	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00390000012446.o.b	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.a.b	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb.b.b #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Bos_b	ANCESTRAL SPECIES	4	ENSGT00390000013187.b	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT01030000234758.a.a.b.a.a.b.b.a.a	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00390000012446.o.b	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.a.b	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb.b.b.f.b #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Hybrid Bos Indicus	MODERN SPECIES	24	ENSBIXG00005009217	ACSS3 (ENSBIXG00005009198) #12	ENSBIXG00005009169	LIN7A (ENSBIXG00005009155) #13	MYF5 (ENSBIXG00005009143) #14	MYF6 (ENSBIXG00005009131) #15	PTPRQ (ENSBIXG00005009087) #16	OTOGL (ENSBIXG00005008900) #17	PPP1R12A (ENSBIXG00005000226) #18	ENSBIXG00005000182	PAWR (ENSBIXG00005000179) #19	SYT1 (ENSBIXG00005008356) #20	ENSBIXG00005008283	NAV3 (ENSBIXG00005000135) #21	ENSBIXG00005008045	E2F7 (ENSBIXG00005008016) #22	CSRP2 (ENSBIXG00005007979) #23	ZDHHC17 (ENSBIXG00005000041) #24	OSBPL8 (ENSBIXG00005007884) #25	ENSBIXG00005029293	BBS10 (ENSBIXG00005029298) #26	ENSBIXG00005029325 #27	PHLDA1 (ENSBIXG00005029359) #28	ENSBIXG00005029389	KRR1 (ENSBIXG00005029408) #29	GLIPR1 (ENSBIXG00005029431) #30	ENSBIXG00005029442 #32	GLIPR1L1 (ENSBIXG00005029466) #31	CAPS2 (ENSBIXG00005029482) #33	KCNC2 (ENSBIXG00005029515) #34	ENSBIXG00005029561
Cow	MODERN SPECIES	24	ENSBTAG00000053526	PPFIA2 (ENSBTAG00000003036) #11	ACSS3 (ENSBTAG00000018694) #12	LIN7A (ENSBTAG00000011367) #13	MYF5 (ENSBTAG00000026972) #14	MYF6 (ENSBTAG00000014003) #15	PTPRQ (ENSBTAG00000026977) #16	OTOGL (ENSBTAG00000011336) #17	PPP1R12A (ENSBTAG00000014609) #18	ENSBTAG00000048833	PAWR (ENSBTAG00000043949) #19	SYT1 (ENSBTAG00000034693) #20	ENSBTAG00000054695	NAV3 (ENSBTAG00000009852) #21	ENSBTAG00000054109	E2F7 (ENSBTAG00000016931) #22	CSRP2 (ENSBTAG00000013406) #23	ZDHHC17 (ENSBTAG00000021756) #24	OSBPL8 (ENSBTAG00000004427) #25	BBS10 (ENSBTAG00000050467) #26	PHLDA1 (ENSBTAG00000034985) #28	KRR1 (ENSBTAG00000011591) #29	GLIPR1 (ENSBTAG00000011590) #30	GLIPR1L2 (ENSBTAG00000019260) #32	GLIPR1L1 (ENSBTAG00000004569) #31	CAPS2 (ENSBTAG00000014859) #33	ENSBTAG00000054123 #34	ATXN7L3B (ENSBTAG00000035083) #35	TRHDE (ENSBTAG00000018575) #37	TPH2 (ENSBTAG00000020792)	TBC1D15 (ENSBTAG00000012828)
Bos_a	ANCESTRAL SPECIES	3	ENSGT00390000013187.b	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.b.a.a.b.a.a.a	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000168324	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00390000012446.o.b	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.a.b	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.cb.b.b #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Wild yak	MODERN SPECIES	581																E2F7 (ENSBMUG00000000593) #22	CSRP2 (ENSBMUG00000000626) #23	ZDHHC17 (ENSBMUG00000000646) #24
Domestic yak	MODERN SPECIES	24	ENSBGRG00000003736	MYF5 (ENSBGRG00000003759) #14	MYF6 (ENSBGRG00000003786) #15	PTPRQ (ENSBGRG00000003831) #16	ENSBGRG00000005290	OTOGL (ENSBGRG00000005461) #17	PPP1R12A (ENSBGRG00000006560) #18	ENSBGRG00000007448	PAWR (ENSBGRG00000007479) #19	ENSBGRG00000007603	SYT1 (ENSBGRG00000007621) #20	NAV3 (ENSBGRG00000007767) #21	ENSBGRG00000009036	ENSBGRG00000009079	ENSBGRG00000009095	E2F7 (ENSBGRG00000009145) #22	ENSBGRG00000009376 #23	ZDHHC17 (ENSBGRG00000009471) #24	ENSBGRG00000009858	OSBPL8 (ENSBGRG00000009892) #25	BBS10 (ENSBGRG00000010078) #26	ENSBGRG00000010174 #27	PHLDA1 (ENSBGRG00000010374) #28	ENSBGRG00000010394	KRR1 (ENSBGRG00000010440) #29	GLIPR1 (ENSBGRG00000010721) #30	GLIPR1L2 (ENSBGRG00000010806) #32	ENSBGRG00000011010 #31	CAPS2 (ENSBGRG00000011068) #33	KCNC2 (ENSBGRG00000011149) #34	ENSBGRG00000011407
American bison	MODERN SPECIES	2940														ENSBBBG00000021397	NAV3 (ENSBBBG00000021636) #21	E2F7 (ENSBBBG00000021699) #22	CSRP2 (ENSBBBG00000021745) #23	ZDHHC17 (ENSBBBG00000007523) #24	OSBPL8 (ENSBBBG00000021874) #25	BBS10 (ENSBBBG00000021881) #26	NAP1L1 (ENSBBBG00000022264) #27	PHLDA1 (ENSBBBG00000022301) #28
Siberian musk deer	MODERN SPECIES	161															ENSMMSG00000008018	E2F7 (ENSMMSG00000007800) #22	ENSMMSG00000007753 #23	ZDHHC17 (ENSMMSG00000007709) #24	OSBPL8 (ENSMMSG00000007416) #25	ENSMMSG00000007025 #27	PHLDA1 (ENSMMSG00000006968) #28	ENSMMSG00000006950	KRR1 (ENSMMSG00000006803) #29	GLIPR1 (ENSMMSG00000006761) #30	GLIPR1L2 (ENSMMSG00000006598) #32	GLIPR1L1 (ENSMMSG00000006495) #31	CAPS2 (ENSMMSG00000006455) #33	KCNC2 (ENSMMSG00000006316) #34	ATXN7L3B (ENSMMSG00000006291) #35	ENSMMSG00000006282
Yarkand deer	MODERN SPECIES	22	ENSCHYG00000021532	PPFIA2 (ENSCHYG00000018601) #11	ACSS3 (ENSCHYG00000018161) #12	LIN7A (ENSCHYG00000018063) #13	MYF5 (ENSCHYG00000018006) #14	MYF6 (ENSCHYG00000017934) #15	PTPRQ (ENSCHYG00000015685) #16	OTOGL (ENSCHYG00000013254) #17	PPP1R12A (ENSCHYG00000011940) #18	ENSCHYG00000011841	PAWR (ENSCHYG00000011616) #19	SYT1 (ENSCHYG00000011518) #20	ENSCHYG00000011512	NAV3 (ENSCHYG00000010069) #21	ENSCHYG00000009932	E2F7 (ENSCHYG00000009596) #22	ENSCHYG00000009520	CSRP2 (ENSCHYG00000009422) #23	ZDHHC17 (ENSCHYG00000009052) #24	OSBPL8 (ENSCHYG00000008637) #25	ENSCHYG00000008327 #27	PHLDA1 (ENSCHYG00000008287) #28	KRR1 (ENSCHYG00000008210) #29	GLIPR1 (ENSCHYG00000008170) #30	GLIPR1L2 (ENSCHYG00000008064) #32	GLIPR1L1 (ENSCHYG00000008035) #31	CAPS2 (ENSCHYG00000007943) #33	KCNC2 (ENSCHYG00000007653) #34	ATXN7L3B (ENSCHYG00000007602) #35	ENSCHYG00000007590	TRHDE (ENSCHYG00000007528) #37
Camelidae	ANCESTRAL SPECIES	39	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.cb #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00910000147024	ENSGT00940000162576 #35	ENSGT00940000155878 #37
Alpaca	MODERN SPECIES	1665																E2F7 (ENSVPAG00000011151) #22
Arabian camel	MODERN SPECIES	3	SLC6A15 (ENSCDRG00005005426) #7	TMTC2 (ENSCDRG00005005499) #8	METTL25 (ENSCDRG00005005578) #9	CCDC59 (ENSCDRG00005005635) #10	PPFIA2 (ENSCDRG00005005786) #11	ACSS3 (ENSCDRG00005008842) #12	LIN7A (ENSCDRG00005009181) #13	MYF5 (ENSCDRG00005009235) #14	MYF6 (ENSCDRG00005009281) #15	PTPRQ (ENSCDRG00005009356) #16	OTOGL (ENSCDRG00005010509) #17	PPP1R12A (ENSCDRG00005012542) #18	PAWR (ENSCDRG00005014596) #19	SYT1 (ENSCDRG00005014660) #20	NAV3 (ENSCDRG00005014880) #21	E2F7 (ENSCDRG00005015968) #22	CSRP2 (ENSCDRG00005016043) #23	ZDHHC17 (ENSCDRG00005016120) #24	OSBPL8 (ENSCDRG00005016392) #25	BBS10 (ENSCDRG00005016659) #26	NAP1L1 (ENSCDRG00005016698) #27	PHLDA1 (ENSCDRG00005016995) #28	ENSCDRG00005017029 #29	ENSCDRG00005017128 #30	ENSCDRG00005017149 #32	ENSCDRG00005017179	GLIPR1L1 (ENSCDRG00005017244) #31	CAPS2 (ENSCDRG00005017344) #33	KCNC2 (ENSCDRG00005017383) #34	ENSCDRG00005017473	ATXN7L3B (ENSCDRG00005017489) #35
Atlantogenata	ANCESTRAL SPECIES	16	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Afrotheria	ANCESTRAL SPECIES	8	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Tenrec	MODERN SPECIES	5837																E2F7 (ENSETEG00000014750) #22
Afrotheria_a	ANCESTRAL SPECIES	8	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000162576 #35	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Hyrax	MODERN SPECIES	4937																E2F7 (ENSPCAG00000000596) #22
Elephant	MODERN SPECIES	196	ENSLAFG00000029547	TMTC2 (ENSLAFG00000018670) #8	METTL25 (ENSLAFG00000015370) #9	CCDC59 (ENSLAFG00000015368) #10	PPFIA2 (ENSLAFG00000011055) #11	ACSS3 (ENSLAFG00000011051) #12	LIN7A (ENSLAFG00000014801) #13	MYF5 (ENSLAFG00000016473) #14	MYF6 (ENSLAFG00000016476) #15	PTPRQ (ENSLAFG00000009382) #16	ENSLAFG00000016020 #17	PPP1R12A (ENSLAFG00000014619) #18	ENSLAFG00000007186 #19	SYT1 (ENSLAFG00000013359) #20	NAV3 (ENSLAFG00000001793) #21	E2F7 (ENSLAFG00000017902) #22	ENSLAFG00000028909	CSRP2 (ENSLAFG00000006735) #23	ZDHHC17 (ENSLAFG00000006732) #24	OSBPL8 (ENSLAFG00000009398) #25	BBS10 (ENSLAFG00000009397) #26	NAP1L1 (ENSLAFG00000005711) #27	ENSLAFG00000008030 #28	KRR1 (ENSLAFG00000015986) #29	GLIPR1 (ENSLAFG00000031551) #30	GLIPR1L2 (ENSLAFG00000006750) #32	CAPS2 (ENSLAFG00000006745) #33	KCNC2 (ENSLAFG00000031982) #34	ATXN7L3B (ENSLAFG00000029803) #35	TRHDE (ENSLAFG00000000333) #37	ENSLAFG00000026873
Xenarthra	ANCESTRAL SPECIES	268														ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357 #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33
Sloth	MODERN SPECIES	5359																E2F7 (ENSCHOG00000004785) #22
Armadillo	MODERN SPECIES	3011									ENSDNOG00000041480	ENSDNOG00000015540 #19	ENSDNOG00000031221	SYT1 (ENSDNOG00000032547) #20	NAV3 (ENSDNOG00000005668) #21	ENSDNOG00000042472	ENSDNOG00000048320	E2F7 (ENSDNOG00000001580) #22	ENSDNOG00000008785 #23	ZDHHC17 (ENSDNOG00000014749) #24	OSBPL8 (ENSDNOG00000047010) #25	BBS10 (ENSDNOG00000042628) #26	NAP1L1 (ENSDNOG00000010126) #27	PHLDA1 (ENSDNOG00000018745) #28	KRR1 (ENSDNOG00000015614) #29	GLIPR1 (ENSDNOG00000043370) #30	GLIPR1L2 (ENSDNOG00000018693) #32	ENSDNOG00000031956 #31	CAPS2 (ENSDNOG00000009684) #33
Marsupialia	ANCESTRAL SPECIES	11	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.k #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357.b #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Marsupialia_b	ANCESTRAL SPECIES	13	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.k #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357.b #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Diprotodontia	ANCESTRAL SPECIES	8	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.k #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357.b #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Diprotodontia_a	ANCESTRAL SPECIES	8	ENSGT00940000157277 #7	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a.k #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000160727 #30	ENSGT00940000162357.b #32	ENSGT00940000162547 #31	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
koala	MODERN SPECIES	51	TMTC2 (ENSPCIG00000032378) #8	METTL25 (ENSPCIG00000007809) #9	CCDC59 (ENSPCIG00000007808) #10	PPFIA2 (ENSPCIG00000024777) #11	ACSS3 (ENSPCIG00000035215) #12	LIN7A (ENSPCIG00000029151) #13	MYF5 (ENSPCIG00000029150) #14	MYF6 (ENSPCIG00000029149) #15	PTPRQ (ENSPCIG00000029148) #16	OTOGL (ENSPCIG00000026368) #17	PPP1R12A (ENSPCIG00000026366) #18	PAWR (ENSPCIG00000026365) #19	SYT1 (ENSPCIG00000032719) #20	ENSPCIG00000026362	NAV3 (ENSPCIG00000025666) #21	E2F7 (ENSPCIG00000025823) #22	CSRP2 (ENSPCIG00000005894) #23	ZDHHC17 (ENSPCIG00000005890) #24
Common wonbat	MODERN SPECIES	1095	ACSS3 (ENSVURG00010000986) #12	LIN7A (ENSVURG00010001078) #13	MYF5 (ENSVURG00010001088) #14	MYF6 (ENSVURG00010001122) #15	PTPRQ (ENSVURG00010001162) #16	OTOGL (ENSVURG00010001281) #17	PPP1R12A (ENSVURG00010001421) #18	PAWR (ENSVURG00010001479) #19	SYT1 (ENSVURG00010001565) #20	ENSVURG00010001581	ENSVURG00010001638	NAV3 (ENSVURG00010001745) #21	ENSVURG00010001934	ENSVURG00010001942	ENSVURG00010001969	E2F7 (ENSVURG00010001992) #22	CSRP2 (ENSVURG00010002008) #23	ZDHHC17 (ENSVURG00010002037) #24	OSBPL8 (ENSVURG00010002089) #25	ENSVURG00010002140 #26	ENSVURG00010002166 #27	ENSVURG00010002181 #28
Wallaby	MODERN SPECIES	7268																E2F7 (ENSMEUG00000008461) #22
Tasmanian devil	MODERN SPECIES	4	METTL25 (ENSSHAG00000007147) #9	CCDC59 (ENSSHAG00000031706) #10	ENSSHAG00000032226	PPFIA2 (ENSSHAG00000007734) #11	ACSS3 (ENSSHAG00000005298) #12	ENSSHAG00000025569	LIN7A (ENSSHAG00000029974) #13	MYF5 (ENSSHAG00000013391) #14	MYF6 (ENSSHAG00000013331) #15	PTPRQ (ENSSHAG00000022062) #16	OTOGL (ENSSHAG00000010191) #17	PPP1R12A (ENSSHAG00000005280) #18	ENSSHAG00000022708 #19	SYT1 (ENSSHAG00000009436) #20	NAV3 (ENSSHAG00000001971) #21	E2F7 (ENSSHAG00000002919) #22	CSRP2 (ENSSHAG00000005571) #23	ZDHHC17 (ENSSHAG00000022371) #24	OSBPL8 (ENSSHAG00000023268) #25	BBS10 (ENSSHAG00000001800) #26	NAP1L1 (ENSSHAG00000002304) #27	ENSSHAG00000031318 #28	KRR1 (ENSSHAG00000001646) #29	ENSSHAG00000000387 #32	ENSSHAG00000003351 #32	ENSSHAG00000022579 #33	ENSSHAG00000003523 #34	ENSSHAG00000001350	ENSSHAG00000024905	ENSSHAG00000032196	ENSSHAG00000023271 #37
Opossum	MODERN SPECIES	7	METTL25 (ENSMODG00000020485) #9	ENSMODG00000020484 #10	ENSMODG00000020481 #11	ACSS3 (ENSMODG00000020480) #12	ENSMODG00000037278	LIN7A (ENSMODG00000020479) #13	MYF5 (ENSMODG00000020478) #14	MYF6 (ENSMODG00000039074) #15	PTPRQ (ENSMODG00000020476) #16	OTOGL (ENSMODG00000020473) #17	ENSMODG00000025012	PPP1R12A (ENSMODG00000020471) #18	PAWR (ENSMODG00000020468) #19	SYT1 (ENSMODG00000020467) #20	NAV3 (ENSMODG00000020466) #21	E2F7 (ENSMODG00000020465) #22	ENSMODG00000020464 #23	ENSMODG00000048422 #24	OSBPL8 (ENSMODG00000020459) #25	ENSMODG00000020458 #26	ENSMODG00000020456 #27	ENSMODG00000044376 #28	KRR1 (ENSMODG00000020451) #29	GLIPR1 (ENSMODG00000020450) #30	ENSMODG00000037882	ENSMODG00000025130 #30	ENSMODG00000043532 #32	ENSMODG00000020442 #33	ENSMODG00000020440 #34	TRHDE (ENSMODG00000020425) #37	TBC1D15 (ENSMODG00000020417)
Platypus	MODERN SPECIES	5	SLC6A15 (ENSOANG00000006324) #7	TMTC2 (ENSOANG00000015210) #8	ENSOANG00000004849 #9	ENSOANG00000042867 #10	PPFIA2 (ENSOANG00000004850) #11	ACSS3 (ENSOANG00000004851) #12	ENSOANG00000041857 #13	MYF5 (ENSOANG00000004853) #14	MYF6 (ENSOANG00000004854) #15	PTPRQ (ENSOANG00000004855) #16	OTOGL (ENSOANG00000004859) #17	PPP1R12A (ENSOANG00000001685) #18	PAWR (ENSOANG00000043356) #19	SYT1 (ENSOANG00000007531) #20	NAV3 (ENSOANG00000007451) #21	E2F7 (ENSOANG00000007450) #22	CSRP2 (ENSOANG00000007447) #23	ZDHHC17 (ENSOANG00000047613) #24	OSBPL8 (ENSOANG00000011301) #25	ENSOANG00000037830 #26	ENSOANG00000004688	ENSOANG00000047378 #28	KRR1 (ENSOANG00000014451) #29	ENSOANG00000012140 #30	ENSOANG00000022184 #32	CAPS2 (ENSOANG00000029950) #33	ENSOANG00000000183	TRHDE (ENSOANG00000012281) #37	ENSOANG00000040551	TPH2 (ENSOANG00000012279)	TBC1D15 (ENSOANG00000014716)
Sauria	ANCESTRAL SPECIES	4	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Lepidosauria	ANCESTRAL SPECIES	3	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000171110	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Episquamata	ANCESTRAL SPECIES	3	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000166459.B	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Laterata	ANCESTRAL SPECIES	6	ENSGT00390000006546 #10	ENSGT01040000241648	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000166459.B.e	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429	ENSGT00940000156786
Common wall lizard	MODERN SPECIES	1	ENSPMRG00000021433	PPFIA2 (ENSPMRG00000019499) #11	ACSS3 (ENSPMRG00000019167) #12	LIN7A (ENSPMRG00000019147) #13	MYF5 (ENSPMRG00000019143) #14	MYF6 (ENSPMRG00000019140) #15	PTPRQ (ENSPMRG00000019053) #16	ENSPMRG00000019031	OTOGL (ENSPMRG00000018808) #17	ENSPMRG00000018768	ENSPMRG00000018764	PPP1R12A (ENSPMRG00000018742) #18	PAWR (ENSPMRG00000018731) #19	SYT1 (ENSPMRG00000018726) #20	NAV3 (ENSPMRG00000018638) #21	E2F7 (ENSPMRG00000018546) #22	CSRP2 (ENSPMRG00000018535) #23	ENSPMRG00000018530	ZDHHC17 (ENSPMRG00000018520) #24	OSBPL8 (ENSPMRG00000018504) #25	NAP1L1 (ENSPMRG00000018484) #27	PHLDA1 (ENSPMRG00000018474) #28	KRR1 (ENSPMRG00000018460) #29	ENSPMRG00000018446	ENSPMRG00000018434	ENSPMRG00000018418	ENSPMRG00000018408	ENSPMRG00000018404	CAPS2 (ENSPMRG00000018391) #33	KCNC2 (ENSPMRG00000018386) #34	ENSPMRG00000018381
Argentine black and white tegu	MODERN SPECIES	6	ENSSMRG00000010304	PPFIA2 (ENSSMRG00000010302) #11	ACSS3 (ENSSMRG00000010292) #12	LIN7A (ENSSMRG00000010290) #13	MYF5 (ENSSMRG00000010286) #14	MYF6 (ENSSMRG00000010285) #15	PTPRQ (ENSSMRG00000010276) #16	ENSSMRG00000010275	ENSSMRG00000010274	OTOGL (ENSSMRG00000010267) #17	RPS16 (ENSSMRG00000010263)	PPP1R12A (ENSSMRG00000010257) #18	PAWR (ENSSMRG00000010238) #19	SYT1 (ENSSMRG00000010234) #20	NAV3 (ENSSMRG00000002199) #21	E2F7 (ENSSMRG00000002156) #22	CSRP2 (ENSSMRG00000002146) #23	ZDHHC17 (ENSSMRG00000002140) #24	OSBPL8 (ENSSMRG00000002083) #25	NAP1L1 (ENSSMRG00000001927) #27	PHLDA1 (ENSSMRG00000001842) #28	KRR1 (ENSSMRG00000001818) #29	ENSSMRG00000001816	ENSSMRG00000001811	ENSSMRG00000001806	CAPS2 (ENSSMRG00000001794) #33	KCNC2 (ENSSMRG00000001695) #34
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000166459.B	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Elapidae	ANCESTRAL SPECIES	6	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b.f.a #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A.b	ENSGT00940000166459.B	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429	ENSGT00940000156786
Elapidae_a	ANCESTRAL SPECIES	1	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b.f.a #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A.a	ENSGT00940000166459.A.b	ENSGT00940000166459.B	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Acanthophiinae	ANCESTRAL SPECIES		ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b.f.a #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A.b	ENSGT00940000166459.B	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Mainland tiger snake	MODERN SPECIES	20	PPFIA2 (ENSNSUG00000000679) #11	ACSS3 (ENSNSUG00000000722) #12	LIN7A (ENSNSUG00000000879) #13	MYF5 (ENSNSUG00000000881) #14	MYF6 (ENSNSUG00000000885) #15	PTPRQ (ENSNSUG00000000888) #16	ENSNSUG00000000905	OTOGL (ENSNSUG00000000909) #17	ENSNSUG00000000966	ENSNSUG00000000970	PPP1R12A (ENSNSUG00000000977) #18	PAWR (ENSNSUG00000001717) #19	SYT1 (ENSNSUG00000001720) #20	NAV3 (ENSNSUG00000001737) #21	ENSNSUG00000001751	E2F7 (ENSNSUG00000001756) #22	CSRP2 (ENSNSUG00000001781) #23	ZDHHC17 (ENSNSUG00000001783) #24	ENSNSUG00000001793	NAP1L1 (ENSNSUG00000001802) #27	PHLDA1 (ENSNSUG00000002091) #28	KRR1 (ENSNSUG00000002095) #29	ENSNSUG00000002098	ENSNSUG00000002101	ENSNSUG00000002104	ENSNSUG00000002108 #33	KCNC2 (ENSNSUG00000002111) #34	TRHDE (ENSNSUG00000002194) #37	ENSNSUG00000002197	TPH2 (ENSNSUG00000002199)	TBC1D15 (ENSNSUG00000002205)
Eastern brown snake	MODERN SPECIES		METTL25 (ENSPTXG00000007317) #9	CCDC59 (ENSPTXG00000007319) #10	PPFIA2 (ENSPTXG00000007321) #11	ACSS3 (ENSPTXG00000007330) #12	LIN7A (ENSPTXG00000007335) #13	MYF5 (ENSPTXG00000007338) #14	MYF6 (ENSPTXG00000007339) #15	PTPRQ (ENSPTXG00000007341) #16	ENSPTXG00000007343	OTOGL (ENSPTXG00000007346) #17	RPS16 (ENSPTXG00000007353)	PPP1R12A (ENSPTXG00000007355) #18	PAWR (ENSPTXG00000007356) #19	SYT1 (ENSPTXG00000007357) #20	NAV3 (ENSPTXG00000007360) #21	E2F7 (ENSPTXG00000007372) #22	CSRP2 (ENSPTXG00000007374) #23	ZDHHC17 (ENSPTXG00000007375) #24	OSBPL8 (ENSPTXG00000007376) #25	ENSPTXG00000007380	NAP1L1 (ENSPTXG00000007381) #27	PHLDA1 (ENSPTXG00000007382) #28	KRR1 (ENSPTXG00000007383) #29	ENSPTXG00000007385	ENSPTXG00000007387	ENSPTXG00000007389	CAPS2 (ENSPTXG00000007392) #33	TRHDE (ENSPTXG00000007394) #37	ENSPTXG00000007395	RAB21 (ENSPTXG00000007396)	TMEM19 (ENSPTXG00000007397)
Blue-lipped sea krait	MODERN SPECIES	8564																E2F7 (ENSLLTG00000011861) #22
Indian cobra	MODERN SPECIES	6	METTL25 (ENSNNAG00000012065) #9	CCDC59 (ENSNNAG00000012004) #10	PPFIA2 (ENSNNAG00000011658) #11	ACSS3 (ENSNNAG00000011558) #12	LIN7A (ENSNNAG00000011463) #13	MYF5 (ENSNNAG00000011436) #14	MYF6 (ENSNNAG00000011423) #15	PTPRQ (ENSNNAG00000011257) #16	ENSNNAG00000011195	OTOGL (ENSNNAG00000010528) #17	RPS16 (ENSNNAG00000010459)	PPP1R12A (ENSNNAG00000007491) #18	PAWR (ENSNNAG00000007341) #19	SYT1 (ENSNNAG00000007300) #20	NAV3 (ENSNNAG00000007065) #21	E2F7 (ENSNNAG00000006676) #22	CSRP2 (ENSNNAG00000006626) #23	ZDHHC17 (ENSNNAG00000006609) #24	OSBPL8 (ENSNNAG00000006212) #25	NAP1L1 (ENSNNAG00000006156) #27	PHLDA1 (ENSNNAG00000006109) #28	ENSNNAG00000006093	ENSNNAG00000006071	KRR1 (ENSNNAG00000005951) #29	ENSNNAG00000005878	ENSNNAG00000005851	CAPS2 (ENSNNAG00000005778) #33	KCNC2 (ENSNNAG00000005744) #34	TRHDE (ENSNNAG00000005672) #37	TPH2 (ENSNNAG00000005600)	TBC1D15 (ENSNNAG00000005508)
Lizard	MODERN SPECIES	4	LIN54 (ENSACAG00000010548)	ENSACAG00000037629	ENSACAG00000037011	SEC31A (ENSACAG00000010481)	ENSACAG00000041939	TMEM150C (ENSACAG00000043889)	ENOPH1 (ENSACAG00000010419)	HNRNPDL (ENSACAG00000010416)	HNRNPD (ENSACAG00000010342)	ENSACAG00000041319	RASGEF1B (ENSACAG00000010279)	PRKG2 (ENSACAG00000010172)	ENSACAG00000010162	NAV3 (ENSACAG00000014617) #21	ENSACAG00000036618	E2F7 (ENSACAG00000005414) #22	ZDHHC17 (ENSACAG00000006696) #24	CSRP2 (ENSACAG00000037715) #23	ENSACAG00000038391	OSBPL8 (ENSACAG00000006790) #25	PHLDA1 (ENSACAG00000037036) #28	NAP1L1 (ENSACAG00000006924) #27	KRR1 (ENSACAG00000007788) #29	ENSACAG00000007763	ENSACAG00000007749	ENSACAG00000041706	ENSACAG00000007743	ENSACAG00000029585	ENSACAG00000040000	ENSACAG00000029340	CAPS2 (ENSACAG00000007716) #33
tuatara	MODERN SPECIES	1779				PPFIA2 (ENSSPUG00000006051) #11	ACSS3 (ENSSPUG00000006460) #12	ENSSPUG00000006572 #13	ENSSPUG00000006578 #13	MYF6 (ENSSPUG00000006611) #15	PTPRQ (ENSSPUG00000006635) #16	OTOGL (ENSSPUG00000006721) #17	RPS16 (ENSSPUG00000006832)	PPP1R12A (ENSSPUG00000006848) #18	PAWR (ENSSPUG00000006881) #19	SYT1 (ENSSPUG00000006892) #20	NAV3 (ENSSPUG00000006945) #21	E2F7 (ENSSPUG00000007017) #22	CSRP2 (ENSSPUG00000007078) #23	ZDHHC17 (ENSSPUG00000007115) #24	OSBPL8 (ENSSPUG00000007161) #25	BBS10 (ENSSPUG00000007433) #26	NAP1L1 (ENSSPUG00000007452) #27	PHLDA1 (ENSSPUG00000007502) #28	ENSSPUG00000007507	KRR1 (ENSSPUG00000007513) #29	ENSSPUG00000007522	ENSSPUG00000007528	ENSSPUG00000007534	CAPS2 (ENSSPUG00000007542) #33
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37
Archosauria	ANCESTRAL SPECIES	4	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37
Aves	ANCESTRAL SPECIES	1	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37
Neognathae	ANCESTRAL SPECIES	3	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37
Neognathae_c	ANCESTRAL SPECIES		ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00960000190133	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37
Golden eagle	MODERN SPECIES	18	CCDC59 (ENSACCG00020010109) #10	ENSACCG00020010123	PPFIA2 (ENSACCG00020010168) #11	ACSS3 (ENSACCG00020010468) #12	LIN7A (ENSACCG00020010701) #13	MYF5 (ENSACCG00020010710) #14	MYF6 (ENSACCG00020010717) #15	PTPRQ (ENSACCG00020010748) #16	ENSACCG00020010786	OTOGL (ENSACCG00020010835) #17	RPS16 (ENSACCG00020010874)	PPP1R12A (ENSACCG00020010939) #18	PAWR (ENSACCG00020011015) #19	SYT1 (ENSACCG00020011033) #20	NAV3 (ENSACCG00020011091) #21	E2F7 (ENSACCG00020011147) #22	CSRP2 (ENSACCG00020011176) #23	ZDHHC17 (ENSACCG00020011189) #24	OSBPL8 (ENSACCG00020011213) #25	BBS10 (ENSACCG00020011231) #26	NAP1L1 (ENSACCG00020011243) #27	PHLDA1 (ENSACCG00020011262) #28	KRR1 (ENSACCG00020011277) #29	ENSACCG00020011291	ENSACCG00020011297	ENSACCG00020011312	ENSACCG00020011320	ENSACCG00020011333 #33	KCNC2 (ENSACCG00020011347) #34	TRHDE (ENSACCG00020011378) #37	TPH2 (ENSACCG00020011409)
Kakapo	MODERN SPECIES	20	CCDC59 (ENSSHBG00005005147) #10	PPFIA2 (ENSSHBG00005005123) #11	ACSS3 (ENSSHBG00005005107) #12	LIN7A (ENSSHBG00005005088) #13	MYF5 (ENSSHBG00005005076) #14	MYF6 (ENSSHBG00005005072) #15	PTPRQ (ENSSHBG00005005034) #16	ENSSHBG00005004998	OTOGL (ENSSHBG00005004951) #17	RPS16 (ENSSHBG00005004902)	PPP1R12A (ENSSHBG00005004881) #18	PAWR (ENSSHBG00005004872) #19	SYT1 (ENSSHBG00005004867) #20	ENSSHBG00005004847	NAV3 (ENSSHBG00005004247) #21	E2F7 (ENSSHBG00005003861) #22	CSRP2 (ENSSHBG00005003817) #23	ZDHHC17 (ENSSHBG00005003761) #24	OSBPL8 (ENSSHBG00005003509) #25	ENSSHBG00005003428	BBS10 (ENSSHBG00005003419) #26	NAP1L1 (ENSSHBG00005003406) #27	PHLDA1 (ENSSHBG00005003397) #28	KRR1 (ENSSHBG00005003376) #29	ENSSHBG00005003356	ENSSHBG00005003343	ENSSHBG00005003325	ENSSHBG00005003305	CAPS2 (ENSSHBG00005003291) #33	KCNC2 (ENSSHBG00005003258) #34	TRHDE (ENSSHBG00005003220) #37
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Great tit	MODERN SPECIES	10	CCDC59 (ENSPMJG00000012676) #10	PPFIA2 (ENSPMJG00000012675) #11	ACSS3 (ENSPMJG00000012674) #12	LIN7A (ENSPMJG00000012673) #13	MYF5 (ENSPMJG00000012672) #14	MYF6 (ENSPMJG00000012671) #15	PTPRQ (ENSPMJG00000012670) #16	ENSPMJG00000012669	OTOGL (ENSPMJG00000012668) #17	RPS16 (ENSPMJG00000012667)	PPP1R12A (ENSPMJG00000012665) #18	PAWR (ENSPMJG00000012664) #19	ENSPMJG00000012663	SYT1 (ENSPMJG00000012662) #20	NAV3 (ENSPMJG00000012656) #21	E2F7 (ENSPMJG00000012655) #22	CSRP2 (ENSPMJG00000012654) #23	ZDHHC17 (ENSPMJG00000012653) #24	OSBPL8 (ENSPMJG00000012652) #25	NAP1L1 (ENSPMJG00000012651) #27	PHLDA1 (ENSPMJG00000012650) #28	KRR1 (ENSPMJG00000012649) #29	ENSPMJG00000012648	ENSPMJG00000012647	ENSPMJG00000012646	CAPS2 (ENSPMJG00000012645) #33	KCNC2 (ENSPMJG00000012644) #34	ENSPMJG00000012643	TRHDE (ENSPMJG00000012642) #37	TPH2 (ENSPMJG00000012641)	TBC1D15 (ENSPMJG00000012640)
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Medium ground finch	MODERN SPECIES	13		TMTC2 (ENSGFOG00000000573) #8	METTL25 (ENSGFOG00000000588) #9	CCDC59 (ENSGFOG00000000604) #10	ENSGFOG00000000855 #11	ACSS3 (ENSGFOG00000004536) #12	LIN7A (ENSGFOG00000004616) #13	MYF5 (ENSGFOG00000004624) #14	MYF6 (ENSGFOG00000004628) #15	PTPRQ (ENSGFOG00000004653) #16	OTOGL (ENSGFOG00000004777) #17	RPS16 (ENSGFOG00000004986)	PPP1R12A (ENSGFOG00000005009) #18	SYT1 (ENSGFOG00000005048) #20	NAV3 (ENSGFOG00000005066) #21	E2F7 (ENSGFOG00000005143) #22	CSRP2 (ENSGFOG00000005156) #23	ZDHHC17 (ENSGFOG00000005185) #24	OSBPL8 (ENSGFOG00000005268) #25	NAP1L1 (ENSGFOG00000005292) #27	KRR1 (ENSGFOG00000005331) #29	ENSGFOG00000005348	ENSGFOG00000005356	ENSGFOG00000005369	ENSGFOG00000005379 #33	KCNC2 (ENSGFOG00000005392) #34	TRHDE (ENSGFOG00000005406) #37	TPH2 (ENSGFOG00000005460)	TBC1D15 (ENSGFOG00000005583)	RAB21 (ENSGFOG00000006163)	TMEM19 (ENSGFOG00000006172)
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Zebra finch	MODERN SPECIES	11	METTL25 (ENSTGUG00000007841) #9	CCDC59 (ENSTGUG00000007835) #10	PPFIA2 (ENSTGUG00000007778) #11	ACSS3 (ENSTGUG00000007763) #12	LIN7A (ENSTGUG00000007757) #13	MYF5 (ENSTGUG00000007755) #14	MYF6 (ENSTGUG00000007751) #15	PTPRQ (ENSTGUG00000007720) #16	ENSTGUG00000023557	OTOGL (ENSTGUG00000007680) #17	RPS16 (ENSTGUG00000007667)	PPP1R12A (ENSTGUG00000007603) #18	PAWR (ENSTGUG00000020006) #19	SYT1 (ENSTGUG00000007572) #20	NAV3 (ENSTGUG00000007519) #21	E2F7 (ENSTGUG00000007515) #22	CSRP2 (ENSTGUG00000028299) #23	ZDHHC17 (ENSTGUG00000007477) #24	OSBPL8 (ENSTGUG00000007445) #25	BBS10 (ENSTGUG00000007444) #26	NAP1L1 (ENSTGUG00000007412) #27	PHLDA1 (ENSTGUG00000018888) #28	KRR1 (ENSTGUG00000007385) #29	ENSTGUG00000007376	ENSTGUG00000007373	ENSTGUG00000007370	CAPS2 (ENSTGUG00000007358) #33	KCNC2 (ENSTGUG00000007354) #34	TRHDE (ENSTGUG00000026259) #37	TPH2 (ENSTGUG00000007300)	TBC1D15 (ENSTGUG00000007267)
Common canary	MODERN SPECIES	6	CCDC59 (ENSSCAG00000008055) #10	PPFIA2 (ENSSCAG00000008164) #11	ACSS3 (ENSSCAG00000008416) #12	LIN7A (ENSSCAG00000008443) #13	MYF5 (ENSSCAG00000008451) #14	MYF6 (ENSSCAG00000008454) #15	PTPRQ (ENSSCAG00000008462) #16	ENSSCAG00000008481	OTOGL (ENSSCAG00000008492) #17	RPS16 (ENSSCAG00000008547)	PPP1R12A (ENSSCAG00000008580) #18	PAWR (ENSSCAG00000008657) #19	SYT1 (ENSSCAG00000008697) #20	ENSSCAG00000008738 #21	ENSSCAG00000008755 #21	E2F7 (ENSSCAG00000008773) #22	CSRP2 (ENSSCAG00000008783) #23	ZDHHC17 (ENSSCAG00000008792) #24	OSBPL8 (ENSSCAG00000008836) #25	NAP1L1 (ENSSCAG00000008861) #27	PHLDA1 (ENSSCAG00000008868) #28	KRR1 (ENSSCAG00000008870) #29	ENSSCAG00000008874	ENSSCAG00000008881	ENSSCAG00000008887	ENSSCAG00000008897 #33	KCNC2 (ENSSCAG00000008902) #34	TRHDE (ENSSCAG00000008927) #37	TPH2 (ENSSCAG00000008941)	TBC1D15 (ENSSCAG00000008954)	RAB21 (ENSSCAG00000008962)
Flycatcher	MODERN SPECIES	10	TMTC2 (ENSFALG00000010537) #8	METTL25 (ENSFALG00000010529) #9	CCDC59 (ENSFALG00000010525) #10	PPFIA2 (ENSFALG00000010521) #11	ACSS3 (ENSFALG00000010517) #12	LIN7A (ENSFALG00000010511) #13	MYF5 (ENSFALG00000010507) #14	MYF6 (ENSFALG00000010503) #15	PTPRQ (ENSFALG00000010498) #16	ENSFALG00000026391	OTOGL (ENSFALG00000010495) #17	ENSFALG00000028909	PPP1R12A (ENSFALG00000010487) #18	SYT1 (ENSFALG00000010476) #20	NAV3 (ENSFALG00000010449) #21	E2F7 (ENSFALG00000010433) #22	CSRP2 (ENSFALG00000010426) #23	ZDHHC17 (ENSFALG00000010415) #24	OSBPL8 (ENSFALG00000010404) #25	NAP1L1 (ENSFALG00000010403) #27	PHLDA1 (ENSFALG00000014745) #28	KRR1 (ENSFALG00000010395) #29	ENSFALG00000010390	ENSFALG00000010384	ENSFALG00000029079	ENSFALG00000024791 #33	KCNC2 (ENSFALG00000010376) #34	TRHDE (ENSFALG00000010372) #37	TPH2 (ENSFALG00000010361)	TBC1D15 (ENSFALG00000010336)	RAB21 (ENSFALG00000026065)
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Anatidae	ANCESTRAL SPECIES	14	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000267073	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429
Pink-footed goose	MODERN SPECIES	36	RANGAP1 (ENSABRG00000004047)	CHADL (ENSABRG00000003979)	ENSABRG00000003973 ##11	ENSABRG00000003943 #12	LIN7A (ENSABRG00000003928) #13	MYF5 (ENSABRG00000003896) #14	MYF6 (ENSABRG00000003882) #15	PTPRQ (ENSABRG00000003711) #16	OTOGL (ENSABRG00000003060) #17	RPS16 (ENSABRG00000002997)	PPP1R12A (ENSABRG00000002856) #18	PAWR (ENSABRG00000002832) #19	SYT1 (ENSABRG00000002806) #20	ENSABRG00000002691	NAV3 (ENSABRG00000002539) #21	E2F7 (ENSABRG00000002456) #22	CSRP2 (ENSABRG00000002441) #23	ZDHHC17 (ENSABRG00000002383) #24	OSBPL8 (ENSABRG00000002275) #25	BBS10 (ENSABRG00000002187) #26	NAP1L1 (ENSABRG00000002153) #27	PHLDA1 (ENSABRG00000002143) #28	KRR1 (ENSABRG00000002114) #29	ENSABRG00000002091	ENSABRG00000002072	ENSABRG00000002061	CAPS2 (ENSABRG00000001989) #33	KCNC2 (ENSABRG00000001961) #34	TRHDE (ENSABRG00000001879) #37	ENSABRG00000001857	TPH2 (ENSABRG00000001821)
Duck	MODERN SPECIES		RANGAP1 (ENSAPLG00000006767)	ENSAPLG00000029393	LIN7A (ENSAPLG00000017756) #13	ENSAPLG00000001136 #13	MYF5 (ENSAPLG00000001124) #14	MYF6 (ENSAPLG00000002254) #15	PTPRQ (ENSAPLG00000016187) #16	ENSAPLG00000019979	OTOGL (ENSAPLG00000015946) #17	RPS16 (ENSAPLG00000015907)	PPP1R12A (ENSAPLG00000015197) #18	PAWR (ENSAPLG00000027740) #19	SYT1 (ENSAPLG00000014912) #20	ENSAPLG00000029309	NAV3 (ENSAPLG00000014672) #21	E2F7 (ENSAPLG00000014506) #22	ENSAPLG00000014346	ZDHHC17 (ENSAPLG00000014034) #24	OSBPL8 (ENSAPLG00000016005) #25	NAP1L1 (ENSAPLG00000016178) #27	PHLDA1 (ENSAPLG00000002044) #28	KRR1 (ENSAPLG00000016378) #29	ENSAPLG00000011934	ENSAPLG00000020051	CAPS2 (ENSAPLG00000011831) #33	KCNC2 (ENSAPLG00000008754) #34	TRHDE (ENSAPLG00000004571) #37	TPH2 (ENSAPLG00000003421)	TBC1D15 (ENSAPLG00000002695)	RAB21 (ENSAPLG00000029848)	TMEM19 (ENSAPLG00000002431)
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Japanese quail	MODERN SPECIES		METTL25 (ENSCJPG00005004697) #9	CCDC59 (ENSCJPG00005004695) #10	PPFIA2 (ENSCJPG00005001332) #11	ACSS3 (ENSCJPG00005001150) #12	LIN7A (ENSCJPG00005001112) #13	MYF5 (ENSCJPG00005001107) #14	MYF6 (ENSCJPG00005001103) #15	PTPRQ (ENSCJPG00005001013) #16	OTOGL (ENSCJPG00005000816) #17	RPS16 (ENSCJPG00005000776)	PPP1R12A (ENSCJPG00005016217) #18	PAWR (ENSCJPG00005016216) #19	SYT1 (ENSCJPG00005016211) #20	NAV3 (ENSCJPG00005016185) #21	ENSCJPG00005016175	E2F7 (ENSCJPG00005016173) #22	CSRP2 (ENSCJPG00005016171) #23	ZDHHC17 (ENSCJPG00005016170) #24	OSBPL8 (ENSCJPG00005016164) #25	BBS10 (ENSCJPG00005016163) #26	NAP1L1 (ENSCJPG00005016162) #27	PHLDA1 (ENSCJPG00005016153) #28	KRR1 (ENSCJPG00005016146) #29	ENSCJPG00005016145	ENSCJPG00005016144	ENSCJPG00005016143	ENSCJPG00005016141	CAPS2 (ENSCJPG00005016140) #33	KCNC2 (ENSCJPG00005016138) #34	TRHDE (ENSCJPG00005016108) #37	TPH2 (ENSCJPG00005016097)
Phasianidae_b	ANCESTRAL SPECIES	9	ENSGT00940000156144 #8	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Chicken	MODERN SPECIES		CCDC59 (ENSGALG00010010017) #10	ENSGALG00010013569	PPFIA2 (ENSGALG00010012450) #11	ACSS3 (ENSGALG00010012337) #12	ENSGALG00010014881 #13	ENSGALG00010012271 #13	MYF5 (ENSGALG00010012264) #14	MYF6 (ENSGALG00010012253) #15	PTPRQ (ENSGALG00010012230) #16	OTOGL (ENSGALG00010013364) #17	RPS16 (ENSGALG00010013358)	PPP1R12A (ENSGALG00010013333) #18	PAWR (ENSGALG00010013283) #19	SYT1 (ENSGALG00010012026) #20	NAV3 (ENSGALG00010013648) #21	E2F7 (ENSGALG00010013538) #22	CSRP2 (ENSGALG00010013516) #23	ZDHHC17 (ENSGALG00010013476) #24	OSBPL8 (ENSGALG00010013444) #25	BBS10 (ENSGALG00010013400) #26	NAP1L1 (ENSGALG00010013389) #27	PHLDA1 (ENSGALG00010014238) #28	KRR1 (ENSGALG00010012975) #29	GLIPR1L (ENSGALG00010012966)	GLIPR1 (ENSGALG00010012924)	GLIPR1L1 (ENSGALG00010012907)	ENSGALG00010012899	CAPS2 (ENSGALG00010012891) #33	KCNC2 (ENSGALG00010012870) #34	TRHDE (ENSGALG00010012849) #37	TPH2 (ENSGALG00010012834)
Turkey	MODERN SPECIES		ENSMGAG00000011134	TSPAN19 (ENSMGAG00000017647)	SLC6A15 (ENSMGAG00000011123) #7	ENSMGAG00000011103 #11	ACSS3 (ENSMGAG00000011096) #12	LIN7A (ENSMGAG00000011093) #13	MYF6 (ENSMGAG00000011091) #15	ENSMGAG00000018753	PTPRQ (ENSMGAG00000011081) #16	OTOGL (ENSMGAG00000011065) #17	ENSMGAG00000011060	PPP1R12A (ENSMGAG00000011011) #18	PAWR (ENSMGAG00000011010) #19	SYT1 (ENSMGAG00000011006) #20	NAV3 (ENSMGAG00000010956) #21	E2F7 (ENSMGAG00000010943) #22	CSRP2 (ENSMGAG00000010931) #23	ZDHHC17 (ENSMGAG00000010911) #24	OSBPL8 (ENSMGAG00000010890) #25	NAP1L1 (ENSMGAG00000010858) #27	ENSMGAG00000010856	KRR1 (ENSMGAG00000010844) #29	ENSMGAG00000010839	ENSMGAG00000010833	ENSMGAG00000010832	ENSMGAG00000010827	CAPS2 (ENSMGAG00000010816) #33	KCNC2 (ENSMGAG00000010812) #34	TRHDE (ENSMGAG00000010787) #37	TPH2 (ENSMGAG00000010781)	TBC1D15 (ENSMGAG00000010741)
African ostrich	MODERN SPECIES	426	TMTC2 (ENSSCUG00000008949) #8	METTL25 (ENSSCUG00000008954) #9	CCDC59 (ENSSCUG00000008956) #10	PPFIA2 (ENSSCUG00000008966) #11	ACSS3 (ENSSCUG00000008985) #12	LIN7A (ENSSCUG00000008995) #13	ENSSCUG00000008997 #13	MYF6 (ENSSCUG00000008999) #15	PTPRQ (ENSSCUG00000009002) #16	OTOGL (ENSSCUG00000009047) #17	RPS16 (ENSSCUG00000009078)	PPP1R12A (ENSSCUG00000009087) #18	SYT1 (ENSSCUG00000009090) #20	NAV3 (ENSSCUG00000009108) #21	ENSSCUG00000009143	E2F7 (ENSSCUG00000009145) #22	CSRP2 (ENSSCUG00000009147) #23	ZDHHC17 (ENSSCUG00000009151) #24	OSBPL8 (ENSSCUG00000009164) #25	NAP1L1 (ENSSCUG00000009180) #27	KRR1 (ENSSCUG00000009184) #29	ENSSCUG00000009187	ENSSCUG00000009190	ENSSCUG00000009192	ENSSCUG00000009194	CAPS2 (ENSSCUG00000009195) #33	KCNC2 (ENSSCUG00000009197) #34	TRHDE (ENSSCUG00000009206) #37	TPH2 (ENSSCUG00000009230)	TBC1D15 (ENSSCUG00000009266)	RAB21 (ENSSCUG00000009312)
Australian saltwater crocodile	MODERN SPECIES	49	PPFIA2 (ENSCPRG00005003178) #11	ACSS3 (ENSCPRG00005003271) #12	LIN7A (ENSCPRG00005003468) #13	ENSCPRG00005003470 #13	MYF5 (ENSCPRG00005003473) #14	MYF6 (ENSCPRG00005003486) #15	PTPRQ (ENSCPRG00005003495) #16	ENSCPRG00005003525	OTOGL (ENSCPRG00005003554) #17	RPS16 (ENSCPRG00005003696)	PPP1R12A (ENSCPRG00005003724) #18	PAWR (ENSCPRG00005003774) #19	SYT1 (ENSCPRG00005003800) #20	NAV3 (ENSCPRG00005004050) #21	ENSCPRG00005005917	E2F7 (ENSCPRG00005005958) #22	CSRP2 (ENSCPRG00005005963) #23	ZDHHC17 (ENSCPRG00005006020) #24	OSBPL8 (ENSCPRG00005006069) #25	BBS10 (ENSCPRG00005006087) #26	NAP1L1 (ENSCPRG00005006105) #27	PHLDA1 (ENSCPRG00005006137) #28	KRR1 (ENSCPRG00005006167) #29	ENSCPRG00005006174	ENSCPRG00005006177	ENSCPRG00005006179	ENSCPRG00005006183	CAPS2 (ENSCPRG00005006189) #33	KCNC2 (ENSCPRG00005006250) #34	TRHDE (ENSCPRG00005006331) #37	TPH2 (ENSCPRG00005006354)
Cryptodira	ANCESTRAL SPECIES	11	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000160727 #30	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34
Testudinoidea	DUPLICATION
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713.v #22	ENSGT00940000157713.u #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000160727 #30	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34
Emydidae	ANCESTRAL SPECIES	10	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713.v #22	ENSGT00940000157713.u #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000160727 #30	ENSGT00440000034107.b	ENSGT00940000159670 #33	ENSGT00940000157371 #34
painted turtle	MODERN SPECIES	2420														NAV3 (ENSCPBG00000017880) #21	PMS2 (ENSCPBG00000017946)	E2F7 (ENSCPBG00000018079) #22	CSRP2 (ENSCPBG00000018081) #23	ZDHHC17 (ENSCPBG00000018083) #24	OSBPL8 (ENSCPBG00000018089) #25	BBS10 (ENSCPBG00000018096) #26	NAP1L1 (ENSCPBG00000018098) #27	PHLDA1 (ENSCPBG00000018103) #28	KRR1 (ENSCPBG00000018105) #29	ENSCPBG00000018107	GLIPR1 (ENSCPBG00000018108) #30	ENSCPBG00000018109 #30	ENSCPBG00000018110	CAPS2 (ENSCPBG00000018113) #33	KCNC2 (ENSCPBG00000018114) #34
Three-toed box turtle	MODERN SPECIES	28	ENSTMTG00000000306 #11	ENSTMTG00000000244 #11	ACSS3 (ENSTMTG00000000183) #12	LIN7A (ENSTMTG00000000157) #13	ENSTMTG00000000099 #13	MYF5 (ENSTMTG00000000077) #14	MYF6 (ENSTMTG00000018967) #15	PTPRQ (ENSTMTG00000018868) #16	OTOGL (ENSTMTG00000018509) #17	RPS16 (ENSTMTG00000018474)	PPP1R12A (ENSTMTG00000018415) #18	PAWR (ENSTMTG00000018399) #19	SYT1 (ENSTMTG00000018366) #20	NAV3 (ENSTMTG00000018146) #21	ENSTMTG00000018124 #22	ENSTMTG00000018112 #22	CSRP2 (ENSTMTG00000018107) #23	ZDHHC17 (ENSTMTG00000018059) #24	OSBPL8 (ENSTMTG00000018028) #25	BBS10 (ENSTMTG00000017983) #26	NAP1L1 (ENSTMTG00000017966) #27	PHLDA1 (ENSTMTG00000017953) #28	KRR1 (ENSTMTG00000017936) #29	ENSTMTG00000017924	ENSTMTG00000017909	ENSTMTG00000017897	ENSTMTG00000017887	CAPS2 (ENSTMTG00000017868) #33	KCNC2 (ENSTMTG00000017857) #34	TRHDE (ENSTMTG00000017809) #37	TPH2 (ENSTMTG00000017763)
Testudinidae	ANCESTRAL SPECIES	12	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713.v #22	ENSGT00940000157713.u #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	174															ENSCABG00000017714 #22	ENSCABG00000017712 #22	CSRP2 (ENSCABG00000017635) #23	ZDHHC17 (ENSCABG00000017622) #24	ENSCABG00000017559	ANXA1 (ENSCABG00000017367)	RORB (ENSCABG00000017351)	TRPM6 (ENSCABG00000017252)
Abingdon island giant tortoise	MODERN SPECIES	174																ENSCABG00000017714 #22	ENSCABG00000017712 #22	CSRP2 (ENSCABG00000017635) #23	ZDHHC17 (ENSCABG00000017622) #24	ENSCABG00000017559	ANXA1 (ENSCABG00000017367)	RORB (ENSCABG00000017351)	TRPM6 (ENSCABG00000017252)
Goode s thornscrub tortoise	MODERN SPECIES		METTL25 (ENSGEVG00005006938) #9	CCDC59 (ENSGEVG00005006965) #10	PPFIA2 (ENSGEVG00005007013) #11	ACSS3 (ENSGEVG00005007236) #12	LIN7A (ENSGEVG00005007306) #13	MYF5 (ENSGEVG00005007350) #14	MYF6 (ENSGEVG00005007365) #15	PTPRQ (ENSGEVG00005007409) #16	OTOGL (ENSGEVG00005007663) #17	RPS16 (ENSGEVG00005008158)	PPP1R12A (ENSGEVG00005008199) #18	PAWR (ENSGEVG00005008262) #19	SYT1 (ENSGEVG00005008297) #20	NAV3 (ENSGEVG00005008397) #21	ENSGEVG00005008646 #22	ENSGEVG00005008668 #22	CSRP2 (ENSGEVG00005008707) #23	ZDHHC17 (ENSGEVG00005008730) #24	OSBPL8 (ENSGEVG00005008789) #25	BBS10 (ENSGEVG00005008898) #26	NAP1L1 (ENSGEVG00005000012) #27	PHLDA1 (ENSGEVG00005000018) #28	KRR1 (ENSGEVG00005000023) #29	ENSGEVG00005000031	ENSGEVG00005000043	GLIPR1 (ENSGEVG00005000064) #30	ENSGEVG00005000074	CAPS2 (ENSGEVG00005000103) #33	KCNC2 (ENSGEVG00005000127) #34	TRHDE (ENSGEVG00005000157) #37	TPH2 (ENSGEVG00005000195)
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713.v #22	ENSGT00940000157713.u #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000160727 #30	ENSGT00440000034107.b	ENSGT00940000159670 #33
Testudinidae	ANCESTRAL SPECIES	12	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713.v #22	ENSGT00940000157713.u #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37
Goode s thornscrub tortoise	MODERN SPECIES		TMTC2 (ENSGEVG00005006853) #8	METTL25 (ENSGEVG00005006938) #9	CCDC59 (ENSGEVG00005006965) #10	PPFIA2 (ENSGEVG00005007013) #11	ACSS3 (ENSGEVG00005007236) #12	LIN7A (ENSGEVG00005007306) #13	MYF5 (ENSGEVG00005007350) #14	MYF6 (ENSGEVG00005007365) #15	PTPRQ (ENSGEVG00005007409) #16	OTOGL (ENSGEVG00005007663) #17	RPS16 (ENSGEVG00005008158)	PPP1R12A (ENSGEVG00005008199) #18	PAWR (ENSGEVG00005008262) #19	SYT1 (ENSGEVG00005008297) #20	NAV3 (ENSGEVG00005008397) #21	ENSGEVG00005008646 #22	ENSGEVG00005008668 #22	CSRP2 (ENSGEVG00005008707) #23	ZDHHC17 (ENSGEVG00005008730) #24	OSBPL8 (ENSGEVG00005008789) #25	BBS10 (ENSGEVG00005008898) #26	NAP1L1 (ENSGEVG00005000012) #27	PHLDA1 (ENSGEVG00005000018) #28	KRR1 (ENSGEVG00005000023) #29	ENSGEVG00005000031	ENSGEVG00005000043	GLIPR1 (ENSGEVG00005000064) #30	ENSGEVG00005000074	CAPS2 (ENSGEVG00005000103) #33	KCNC2 (ENSGEVG00005000127) #34	TRHDE (ENSGEVG00005000157) #37
Emydidae	ANCESTRAL SPECIES	10	ENSGT00530000063745.b #9	ENSGT00390000006546 #10	ENSGT01050000244900.a.a.a.a.b #11	ENSGT00940000157479 #12	ENSGT00940000153222.a.a #13	ENSGT00950000182959.a.a #14	ENSGT00950000182959.a.b.b.a #15	ENSGT00940000159215 #16	ENSGT00960000187527	ENSGT00940000160698 #17	ENSGT00390000013067	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713.v #22	ENSGT00940000157713.u #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000166459.A	ENSGT00940000165853.i	ENSGT00940000165853.j	ENSGT00940000171110	ENSGT00940000160727 #30	ENSGT00440000034107.b	ENSGT00940000159670 #33
Three-toed box turtle	MODERN SPECIES	28	CCDC59 (ENSTMTG00000000341) #10	ENSTMTG00000000306 #11	ENSTMTG00000000244 #11	ACSS3 (ENSTMTG00000000183) #12	LIN7A (ENSTMTG00000000157) #13	ENSTMTG00000000099 #13	MYF5 (ENSTMTG00000000077) #14	MYF6 (ENSTMTG00000018967) #15	PTPRQ (ENSTMTG00000018868) #16	OTOGL (ENSTMTG00000018509) #17	RPS16 (ENSTMTG00000018474)	PPP1R12A (ENSTMTG00000018415) #18	PAWR (ENSTMTG00000018399) #19	SYT1 (ENSTMTG00000018366) #20	NAV3 (ENSTMTG00000018146) #21	ENSTMTG00000018124 #22	ENSTMTG00000018112 #22	CSRP2 (ENSTMTG00000018107) #23	ZDHHC17 (ENSTMTG00000018059) #24	OSBPL8 (ENSTMTG00000018028) #25	BBS10 (ENSTMTG00000017983) #26	NAP1L1 (ENSTMTG00000017966) #27	PHLDA1 (ENSTMTG00000017953) #28	KRR1 (ENSTMTG00000017936) #29	ENSTMTG00000017924	ENSTMTG00000017909	ENSTMTG00000017897	ENSTMTG00000017887	CAPS2 (ENSTMTG00000017868) #33	KCNC2 (ENSTMTG00000017857) #34	TRHDE (ENSTMTG00000017809) #37
Chinese turtle	MODERN SPECIES	718	TMTC2 (ENSPSIG00000006034) #8	METTL25 (ENSPSIG00000007019) #9	PPFIA2 (ENSPSIG00000007454) #11	ACSS3 (ENSPSIG00000009322) #12	LIN7A (ENSPSIG00000011871) #13	MYF5 (ENSPSIG00000012000) #14	MYF6 (ENSPSIG00000012468) #15	ENSPSIG00000013550	OTOGL (ENSPSIG00000014034) #17	ENSPSIG00000016823	ENSPSIG00000016930	PPP1R12A (ENSPSIG00000017200) #18	PAWR (ENSPSIG00000007487) #19	SYT1 (ENSPSIG00000007501) #20	NAV3 (ENSPSIG00000009060) #21	E2F7 (ENSPSIG00000012629) #22	CSRP2 (ENSPSIG00000012637) #23	ZDHHC17 (ENSPSIG00000012905) #24	ENSPSIG00000001298
Anura	ANCESTRAL SPECIES	24	ENSGT00950000183205.b.a.b.a.b	ENSGT00940000160716	ENSGT00940000155486	ENSGT00940000158917	ENSGT00950000183146.a.a	ENSGT00940000156749	ENSGT00390000010948	ENSGT00940000157098	ENSGT00940000157309	ENSGT00940000161214	ENSGT00940000154932.A	ENSGT00940000156120.a #18	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #23	ENSGT00530000063074.b.b #24	ENSGT00940000156622 #25	ENSGT00390000002417 #26	ENSGT00940000153362.a #27	ENSGT00440000039564.b #28	ENSGT00390000018775 #29	ENSGT00940000165467	ENSGT00940000159670 #33	ENSGT00940000157371 #34	ENSGT00940000155878 #37	ENSGT00950000182885.A.b	ENSGT00940000156429	ENSGT00940000156786	ENSGT00390000017998
Frog	MODERN SPECIES	3	ENSXETG00000042608	ENSXETG00000032882	rpap3 (ENSXETG00000014674)	atp23 (ENSXETG00000014677)	lrig3 (ENSXETG00000021481)	slc16a7 (ENSXETG00000021479)	ENSXETG00000035432	ENSXETG00000043063	ENSXETG00000046348	tafa2 (ENSXETG00000038846)	usp15 (ENSXETG00000021472)	ppp1r12a (ENSXETG00000021468) #18	pawr (ENSXETG00000004074) #19	syt1 (ENSXETG00000004068) #20	nav3 (ENSXETG00000014323) #21	e2f7 (ENSXETG00000014320) #22	csrp2 (ENSXETG00000014318) #23	zdhhc17 (ENSXETG00000014315) #24	ENSXETG00000046768	osbpl8 (ENSXETG00000013334) #25	ENSXETG00000047866	bbs10 (ENSXETG00000031389) #26	nap1l1 (ENSXETG00000013323) #27	phlda1 (ENSXETG00000013321) #28	ENSXETG00000046760	krr1 (ENSXETG00000013312) #29	ENSXETG00000043158	ccdc107 (ENSXETG00000030850)	CAPS2 (ENSXETG00000032225) #33	kcnc2 (ENSXETG00000032745) #34	ENSXETG00000043992
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000029332	PTPRB (ENSLLEG00000029389)	PTPRR (ENSLLEG00000029638)	ENSLLEG00000029670	ENSLLEG00000004652	TSPAN8 (ENSLLEG00000004690)	ENSLLEG00000004700	ENSLLEG00000004706	LGR5 (ENSLLEG00000004723)	ZFC3H1 (ENSLLEG00000004747)	TMEM19 (ENSLLEG00000004833)	RAB21 (ENSLLEG00000004844)	TBC1D15 (ENSLLEG00000004867)	SCUBE1 (ENSLLEG00000004904)	ENSLLEG00000004936	E2F7 (ENSLLEG00000004947) #22	CSRP2 (ENSLLEG00000004972) #23	ZDHHC17 (ENSLLEG00000005022) #24	OSBPL8 (ENSLLEG00000005208) #25	BBS10 (ENSLLEG00000005343) #26	ENSLLEG00000005358	ENSLLEG00000005436 #27	PHLDA1 (ENSLLEG00000006026) #28	ENSLLEG00000006041	KRR1 (ENSLLEG00000006073) #29	ENSLLEG00000006302	CAPS2 (ENSLLEG00000006381) #33	ENSLLEG00000006706 #34	ENSLLEG00000006729 #34	ENSLLEG00000006750	ENSLLEG00000006766 #37
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	944															NAV3 (ENSLACG00000001187) #21	e2f7 (ENSLACG00000014031) #22
Coelacanth	MODERN SPECIES	20																ENSLACG00000000448 #22