Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00910000147024	ENSGT00940000162576 #36
Primates	ANCESTRAL SPECIES	6	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00910000147024	ENSGT00940000162576 #36
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394.b #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394.b #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Mouse lemur	MODERN SPECIES	29	TMTC2 (ENSMICG00000031682) #7	METTL25 (ENSMICG00000027175) #8	CCDC59 (ENSMICG00000041747) #9	PPFIA2 (ENSMICG00000010822) #10	ACSS3 (ENSMICG00000010809) #11	LIN7A (ENSMICG00000033894) #12	MYF5 (ENSMICG00000036139) #13	MYF6 (ENSMICG00000004274) #14	PTPRQ (ENSMICG00000038737) #15	OTOGL (ENSMICG00000026871) #16	PPP1R12A (ENSMICG00000032335) #17	ENSMICG00000032513 #18	PAWR (ENSMICG00000031649) #19	SYT1 (ENSMICG00000015517) #20	NAV3 (ENSMICG00000003403) #21	E2F7 (ENSMICG00000013872) #22	ENSMICG00000014368 #23	CSRP2 (ENSMICG00000047076) #24	ZDHHC17 (ENSMICG00000033453) #25	ENSMICG00000029525 #26	OSBPL8 (ENSMICG00000000969) #27	BBS10 (ENSMICG00000042947) #28	NAP1L1 (ENSMICG00000006036) #29	KRR1 (ENSMICG00000015127) #30	GLIPR1 (ENSMICG00000015121) #31	GLIPR1L2 (ENSMICG00000037234) #32	ENSMICG00000015888 #33	CAPS2 (ENSMICG00000015872) #34	KCNC2 (ENSMICG00000017734) #35	ATXN7L3B (ENSMICG00000033344) #36	TRHDE (ENSMICG00000014223) #37
Lemuriformes_a	ANCESTRAL SPECIES	201															ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000161696	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36
Coquerels sifaka	MODERN SPECIES	402														NAV3 (ENSPCOG00000028313) #21	ENSPCOG00000013372	E2F7 (ENSPCOG00000022301) #22	CSRP2 (ENSPCOG00000019899) #24	ZDHHC17 (ENSPCOG00000018266) #25	OSBPL8 (ENSPCOG00000022869) #27	BBS10 (ENSPCOG00000025178) #28	ENSPCOG00000022339	PHLDA1 (ENSPCOG00000020854)	KRR1 (ENSPCOG00000012869) #30	GLIPR1 (ENSPCOG00000017258) #31
Greater bamboo lemur	MODERN SPECIES	749													NAV3 (ENSPSMG00000004708) #21	ENSPSMG00000004524	ENSPSMG00000004520	E2F7 (ENSPSMG00000004506) #22	CSRP2 (ENSPSMG00000004453) #24	ZDHHC17 (ENSPSMG00000004438) #25	ENSPSMG00000004399	OSBPL8 (ENSPSMG00000004309) #27
Bushbaby	MODERN SPECIES	122	METTL25 (ENSOGAG00000004384) #8	CCDC59 (ENSOGAG00000004383) #9	ENSOGAG00000025088	PPFIA2 (ENSOGAG00000014823) #10	ACSS3 (ENSOGAG00000014813) #11	LIN7A (ENSOGAG00000004616) #12	MYF5 (ENSOGAG00000001039) #13	MYF6 (ENSOGAG00000001038) #14	PTPRQ (ENSOGAG00000025362) #15	OTOGL (ENSOGAG00000030466) #16	PPP1R12A (ENSOGAG00000010740) #17	PAWR (ENSOGAG00000027944) #19	SYT1 (ENSOGAG00000009943) #20	NAV3 (ENSOGAG00000010604) #21	ENSOGAG00000030290	E2F7 (ENSOGAG00000010821) #22	CSRP2 (ENSOGAG00000013999) #24	ZDHHC17 (ENSOGAG00000013994) #25	OSBPL8 (ENSOGAG00000017084) #27	BBS10 (ENSOGAG00000025855) #28	NAP1L1 (ENSOGAG00000010319) #29	PHLDA1 (ENSOGAG00000010317)	ENSOGAG00000010313 #30	GLIPR1 (ENSOGAG00000010309) #31	GLIPR1L2 (ENSOGAG00000010303) #32	ENSOGAG00000010299 #33	CAPS2 (ENSOGAG00000010291) #34	ENSOGAG00000006608	KCNC2 (ENSOGAG00000000768) #35
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00910000147024	ENSGT00940000162576 #36
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00910000147024	ENSGT00940000162576 #36
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00910000147024	ENSGT00940000162576 #36
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546.c #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00910000147024
Hominidae	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546.c #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a #29	ENSGT00910000147072	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546.c #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00910000147024	ENSGT00940000162576 #36
Gorilla	MODERN SPECIES	3	CCDC59 (ENSGGOG00000025296) #9	PPFIA2 (ENSGGOG00000026460) #10	ACSS3 (ENSGGOG00000010105) #11	LIN7A (ENSGGOG00000038053) #12	MYF5 (ENSGGOG00000004366) #13	MYF6 (ENSGGOG00000004369) #14	PTPRQ (ENSGGOG00000011494) #15	ENSGGOG00000015088 #16	ENSGGOG00000025286	PPP1R12A (ENSGGOG00000014574) #17	PAWR (ENSGGOG00000010093) #19	ENSGGOG00000022534	SYT1 (ENSGGOG00000024224) #20	ENSGGOG00000002908	NAV3 (ENSGGOG00000006574) #21	E2F7 (ENSGGOG00000012645) #22	ENSGGOG00000038839	ENSGGOG00000041578 #24	ENSGGOG00000039704 #24	ZDHHC17 (ENSGGOG00000023287) #25	ENSGGOG00000023867	OSBPL8 (ENSGGOG00000016140) #27	BBS10 (ENSGGOG00000023091) #28	ENSGGOG00000041304	NAP1L1 (ENSGGOG00000003883) #29	KRR1 (ENSGGOG00000013596) #30	GLIPR1 (ENSGGOG00000013591) #31	GLIPR1L2 (ENSGGOG00000024647) #32	GLIPR1L1 (ENSGGOG00000001021) #33	CAPS2 (ENSGGOG00000013620) #34	KCNC2 (ENSGGOG00000003896) #35
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546.c #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00910000147024	ENSGT00940000162576 #36
Pan	ANCESTRAL SPECIES	4	ENSGT00530000063745.b #8	ENSGT00390000006546.c #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154389.b.e	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00950000182922.a.a.a.b.a.b.a.b.b.a	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00880000138028.b.b.b	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35
Chimpanzee	MODERN SPECIES	3	PPFIA2 (ENSPTRG00000005265) #10	ACSS3 (ENSPTRG00000005263) #11	LIN7A (ENSPTRG00000005262) #12	MYF5 (ENSPTRG00000005261) #13	MYF6 (ENSPTRG00000005260) #14	PTPRQ (ENSPTRG00000039205) #15	OTOGL (ENSPTRG00000005257) #16	ENSPTRG00000045837	PPP1R12A (ENSPTRG00000005252) #17	PAWR (ENSPTRG00000005250) #19	SYT1 (ENSPTRG00000024064) #20	ENSPTRG00000050322	ENSPTRG00000044151	ENSPTRG00000046920	NAV3 (ENSPTRG00000005247) #21	E2F7 (ENSPTRG00000005245) #22	ENSPTRG00000051009	CSRP2 (ENSPTRG00000005244) #24	ZDHHC17 (ENSPTRG00000005243) #25	ENSPTRG00000048649	ENSPTRG00000045883	OSBPL8 (ENSPTRG00000005242) #27	BBS10 (ENSPTRG00000005241) #28	ENSPTRG00000043245	NAP1L1 (ENSPTRG00000005240) #29	PHLDA1 (ENSPTRG00000043613)	KRR1 (ENSPTRG00000005238) #30	GLIPR1 (ENSPTRG00000005237) #31	GLIPR1L2 (ENSPTRG00000005236) #32	GLIPR1L1 (ENSPTRG00000005234) #33	CAPS2 (ENSPTRG00000005233) #34
Bonobo	MODERN SPECIES	3	METTL25 (ENSPPAG00000028130) #8	CCDC59 (ENSPPAG00000030113) #9	PPFIA2 (ENSPPAG00000033118) #10	ACSS3 (ENSPPAG00000040977) #11	LIN7A (ENSPPAG00000026771) #12	MYF5 (ENSPPAG00000028699) #13	MYF6 (ENSPPAG00000032290) #14	PTPRQ (ENSPPAG00000000830) #15	OTOGL (ENSPPAG00000014085) #16	PPP1R12A (ENSPPAG00000030740) #17	PAWR (ENSPPAG00000043711) #19	SYT1 (ENSPPAG00000029261) #20	ENSPPAG00000028521	ENSPPAG00000015674	NAV3 (ENSPPAG00000036134) #21	E2F7 (ENSPPAG00000002532) #22	ENSPPAG00000042681	ENSPPAG00000042089 #24	ZDHHC17 (ENSPPAG00000030097) #25	ENSPPAG00000040481	OSBPL8 (ENSPPAG00000043423) #27	BBS10 (ENSPPAG00000028532) #28	ENSPPAG00000043638	NAP1L1 (ENSPPAG00000043344) #29	PHLDA1 (ENSPPAG00000030521)	KRR1 (ENSPPAG00000011194) #30	GLIPR1 (ENSPPAG00000038902) #31	GLIPR1L2 (ENSPPAG00000038173) #32	GLIPR1L1 (ENSPPAG00000027759) #33	CAPS2 (ENSPPAG00000005409) #34	ENSPPAG00000040201 #35
Human	MODERN SPECIES	3	SLC6A15 (ENSG00000072041)	TMTC2 (ENSG00000179104) #7	METTL25 (ENSG00000127720) #8	CCDC59 (ENSG00000133773) #9	PPFIA2 (ENSG00000139220) #10	ACSS3 (ENSG00000111058) #11	LIN7A (ENSG00000111052) #12	MYF5 (ENSG00000111049) #13	MYF6 (ENSG00000111046) #14	PTPRQ (ENSG00000139304) #15	OTOGL (ENSG00000165899) #16	PPP1R12A (ENSG00000058272) #17	PAWR (ENSG00000177425) #19	SYT1 (ENSG00000067715) #20	NAV3 (ENSG00000067798) #21	E2F7 (ENSG00000165891) #22	CSRP2 (ENSG00000175183) #24	ZDHHC17 (ENSG00000186908) #25	OSBPL8 (ENSG00000091039) #27	BBS10 (ENSG00000179941) #28	NAP1L1 (ENSG00000187109) #29	PHLDA1 (ENSG00000139289)	KRR1 (ENSG00000111615) #30	GLIPR1 (ENSG00000139278) #31	GLIPR1L2 (ENSG00000180481) #32	GLIPR1L1 (ENSG00000173401) #33	CAPS2 (ENSG00000180881) #34	KCNC2 (ENSG00000166006) #35	ATXN7L3B (ENSG00000253719) #36	TRHDE (ENSG00000072657) #37	TPH2 (ENSG00000139287)
Orangutan	MODERN SPECIES	3	METTL25 (ENSPPYG00000004805) #8	CCDC59 (ENSPPYG00000004804) #9	PPFIA2 (ENSPPYG00000004803) #10	ACSS3 (ENSPPYG00000004802) #11	LIN7A (ENSPPYG00000039262) #12	MYF5 (ENSPPYG00000004800) #13	MYF6 (ENSPPYG00000004799) #14	PTPRQ (ENSPPYG00000041069) #15	OTOGL (ENSPPYG00000004797) #16	PPP1R12A (ENSPPYG00000004796) #17	ENSPPYG00000025853	PAWR (ENSPPYG00000004795) #19	SYT1 (ENSPPYG00000004794) #20	ENSPPYG00000004793	NAV3 (ENSPPYG00000004792) #21	E2F7 (ENSPPYG00000004791) #22	ENSPPYG00000031243 #24	ZDHHC17 (ENSPPYG00000004789) #25	OSBPL8 (ENSPPYG00000004788) #27	ENSPPYG00000037353	BBS10 (ENSPPYG00000004787) #28	ENSPPYG00000032561	NAP1L1 (ENSPPYG00000004786) #29	ENSPPYG00000038710	PHLDA1 (ENSPPYG00000041713)	KRR1 (ENSPPYG00000004785) #30	GLIPR1 (ENSPPYG00000004784) #31	GLIPR1L2 (ENSPPYG00000004783) #32	GLIPR1L1 (ENSPPYG00000004782) #33	CAPS2 (ENSPPYG00000004781) #34	KCNC2 (ENSPPYG00000004780) #35
Gibbon	MODERN SPECIES		SLC6A15 (ENSNLEG00000005336)	TMTC2 (ENSNLEG00000005311) #7	METTL25 (ENSNLEG00000005299) #8	CCDC59 (ENSNLEG00000033968) #9	PPFIA2 (ENSNLEG00000005251) #10	ACSS3 (ENSNLEG00000005227) #11	LIN7A (ENSNLEG00000032491) #12	MYF5 (ENSNLEG00000005207) #13	MYF6 (ENSNLEG00000032583) #14	PTPRQ (ENSNLEG00000005154) #15	OTOGL (ENSNLEG00000005115) #16	PPP1R12A (ENSNLEG00000005041) #17	PAWR (ENSNLEG00000005035) #19	SYT1 (ENSNLEG00000004995) #20	NAV3 (ENSNLEG00000004917) #21	E2F7 (ENSNLEG00000004897) #22	ENSNLEG00000028737	ENSNLEG00000004885 #24	ZDHHC17 (ENSNLEG00000004841) #25	OSBPL8 (ENSNLEG00000004750) #27	BBS10 (ENSNLEG00000004748) #28	ENSNLEG00000031630	NAP1L1 (ENSNLEG00000004682) #29	ENSNLEG00000004680	KRR1 (ENSNLEG00000004647) #30	GLIPR1 (ENSNLEG00000004629) #31	GLIPR1L2 (ENSNLEG00000004622) #32	GLIPR1L1 (ENSNLEG00000004609) #33	CAPS2 (ENSNLEG00000004582) #34	KCNC2 (ENSNLEG00000004570) #35	ATXN7L3B (ENSNLEG00000018759) #36
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000017839.o.b.b.b.f	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00910000147024
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000017839.o.b.b.b.f	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00910000147024
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00390000009168.hb	ENSGT01050000244986.b.b.d.a.a.b	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000017839.o.b.b.b.f	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34
Macaca	ANCESTRAL SPECIES	6	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00910000147454	ENSGT00950000183030.m.a.a.b.b.a.b.a	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00390000009168.hb	ENSGT01050000244986.b.b.d.a.a.b	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a.lb #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35
Pig-tailed macaque	MODERN SPECIES	517	MYF5 (ENSMNEG00000039510) #13	MYF6 (ENSMNEG00000019739) #14	PTPRQ (ENSMNEG00000045562) #15	OTOGL (ENSMNEG00000034772) #16	PPP1R12A (ENSMNEG00000033679) #17	PAWR (ENSMNEG00000004020) #19	SYT1 (ENSMNEG00000030551) #20	ENSMNEG00000031657	ENSMNEG00000038165	ENSMNEG00000037055	ENSMNEG00000028899	ENSMNEG00000026858	ENSMNEG00000009689	ENSMNEG00000000985	NAV3 (ENSMNEG00000043424) #21	E2F7 (ENSMNEG00000025875) #22	CSRP2 (ENSMNEG00000030922) #24	ZDHHC17 (ENSMNEG00000028456) #25	ENSMNEG00000035026	ENSMNEG00000032096	OSBPL8 (ENSMNEG00000028835) #27	ENSMNEG00000030308	BBS10 (ENSMNEG00000040224) #28	NAP1L1 (ENSMNEG00000035793) #29	PHLDA1 (ENSMNEG00000033607)	ENSMNEG00000040738	ENSMNEG00000045114	ENSMNEG00000034922 #30	GLIPR1 (ENSMNEG00000044536) #31	GLIPR1L2 (ENSMNEG00000044396) #32	GLIPR1L1 (ENSMNEG00000028603) #33
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00940000157479 #11	ENSGT00940000153052.c.b.a.a.a.a.b.b.b	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.b.a.b.c.b	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00950000183030.m.a.a.b.b.a.b.a	ENSGT00940000158014 #21	ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.a.a.b	ENSGT01050000245239.a.a	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a	ENSGT01050000244986.b.b.d.a.a.b.a	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a.lb #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000164709.a.b.b.a.b.b.a.a.a.b
Rhesus	MODERN SPECIES	2	MYF5 (ENSMMUG00000011669) #13	MYF6 (ENSMMUG00000011667) #14	PTPRQ (ENSMMUG00000037711) #15	OTOGL (ENSMMUG00000000121) #16	PPP1R12A (ENSMMUG00000019214) #17	ENSMMUG00000053591	PAWR (ENSMMUG00000015179) #19	SYT1 (ENSMMUG00000005530) #20	ENSMMUG00000060137	ENSMMUG00000051304	ENSMMUG00000058640	NAV3 (ENSMMUG00000021329) #21	ENSMMUG00000060140	ENSMMUG00000055171	ENSMMUG00000059985	E2F7 (ENSMMUG00000022846) #22	ENSMMUG00000052719	CSRP2 (ENSMMUG00000018257) #24	ZDHHC17 (ENSMMUG00000018254) #25	ENSMMUG00000057698	OSBPL8 (ENSMMUG00000017864) #27	BBS10 (ENSMMUG00000056087) #28	NAP1L1 (ENSMMUG00000015583) #29	PHLDA1 (ENSMMUG00000064103)	ENSMMUG00000053099	KRR1 (ENSMMUG00000009640) #30	GLIPR1L2 (ENSMMUG00000012290) #32	GLIPR1L1 (ENSMMUG00000012289) #33	CAPS2 (ENSMMUG00000012288) #34	KCNC2 (ENSMMUG00000012362) #35	ENSMMUG00000051853
Crab-eating macaque	MODERN SPECIES	2	PTPRQ (ENSMFAG00000044210) #15	OTOGL (ENSMFAG00000031786) #16	PPP1R12A (ENSMFAG00000034239) #17	ENSMFAG00000049694	ENSMFAG00000063729	PAWR (ENSMFAG00000062333) #19	ENSMFAG00000050054	SYT1 (ENSMFAG00000003495) #20	ENSMFAG00000000157	ENSMFAG00000034379	ENSMFAG00000034925	NAV3 (ENSMFAG00000044289) #21	ENSMFAG00000059233	ENSMFAG00000060207	ENSMFAG00000065572	E2F7 (ENSMFAG00000000355) #22	CSRP2 (ENSMFAG00000033853) #24	ZDHHC17 (ENSMFAG00000042288) #25	ENSMFAG00000034161	ENSMFAG00000047389	ENSMFAG00000057937	OSBPL8 (ENSMFAG00000036321) #27	BBS10 (ENSMFAG00000033883) #28	NAP1L1 (ENSMFAG00000001457) #29	PHLDA1 (ENSMFAG00000001119)	ENSMFAG00000053039	ENSMFAG00000032969	ENSMFAG00000001123	KRR1 (ENSMFAG00000000042) #30	GLIPR1 (ENSMFAG00000003978) #31	GLIPR1L1 (ENSMFAG00000031259) #33
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00940000153294.m.b.s.f	ENSGT00390000014818.g.b.a.a.a.b.b	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000155142.i.a.a	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00390000009168.hb	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00940000158854.ab.a	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000155142.i.a.a	ENSGT00390000003133.i.a	ENSGT00940000163914.c.a	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00390000009168.hb	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00940000158854.ab.a	ENSGT00390000018052.k	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35
Drill	MODERN SPECIES	821				PPP1R12A (ENSMLEG00000040285) #17	PAWR (ENSMLEG00000041230) #19	ENSMLEG00000039162	SYT1 (ENSMLEG00000029930) #20	ENSMLEG00000037266	ENSMLEG00000014509	ENSMLEG00000028959	ENSMLEG00000035186	ENSMLEG00000020902	ENSMLEG00000034369	ENSMLEG00000027815	NAV3 (ENSMLEG00000033553) #21	E2F7 (ENSMLEG00000040254) #22	CSRP2 (ENSMLEG00000041421) #24	ZDHHC17 (ENSMLEG00000009010) #25	ENSMLEG00000042240	ENSMLEG00000040060	OSBPL8 (ENSMLEG00000035972) #27	BBS10 (ENSMLEG00000042359) #28	NAP1L1 (ENSMLEG00000044434) #29	PHLDA1 (ENSMLEG00000037110)	ENSMLEG00000027928	ENSMLEG00000039434	ENSMLEG00000042283	KRR1 (ENSMLEG00000037074) #30	GLIPR1 (ENSMLEG00000037327) #31	GLIPR1L2 (ENSMLEG00000040765) #32	GLIPR1L1 (ENSMLEG00000020393) #33
Sooty mangabey	MODERN SPECIES	582	ENSCATG00000038856	PPFIA2 (ENSCATG00000040747) #10	ACSS3 (ENSCATG00000030914) #11	LIN7A (ENSCATG00000029939) #12	MYF5 (ENSCATG00000042162) #13	MYF6 (ENSCATG00000029151) #14	PTPRQ (ENSCATG00000039610) #15	OTOGL (ENSCATG00000038125) #16	PPP1R12A (ENSCATG00000038278) #17	PAWR (ENSCATG00000034935) #19	SYT1 (ENSCATG00000033541) #20	ENSCATG00000044466	ENSCATG00000040529	ENSCATG00000017337	NAV3 (ENSCATG00000032040) #21	E2F7 (ENSCATG00000035481) #22	CSRP2 (ENSCATG00000040566) #24	ZDHHC17 (ENSCATG00000040479) #25	ENSCATG00000044128	ENSCATG00000039522	ENSCATG00000005498	OSBPL8 (ENSCATG00000036635) #27	BBS10 (ENSCATG00000042101) #28	ENSCATG00000039964	NAP1L1 (ENSCATG00000032285) #29	ENSCATG00000010102	ENSCATG00000040362	KRR1 (ENSCATG00000038219) #30	GLIPR1 (ENSCATG00000007700) #31	GLIPR1L2 (ENSCATG00000032595) #32	GLIPR1L1 (ENSCATG00000035838) #33
Olive baboon	MODERN SPECIES	19	ACSS3 (ENSPANG00000019084) #11	LIN7A (ENSPANG00000005931) #12	MYF5 (ENSPANG00000020394) #13	MYF6 (ENSPANG00000044306) #14	ENSPANG00000005319	PTPRQ (ENSPANG00000014456) #15	OTOGL (ENSPANG00000012907) #16	ENSPANG00000047805	PPP1R12A (ENSPANG00000026354) #17	PAWR (ENSPANG00000009557) #19	SYT1 (ENSPANG00000009048) #20	ENSPANG00000040020	ENSPANG00000015985	ENSPANG00000043139	NAV3 (ENSPANG00000007911) #21	E2F7 (ENSPANG00000004929) #22	CSRP2 (ENSPANG00000023047) #24	ZDHHC17 (ENSPANG00000004050) #25	ENSPANG00000028903	OSBPL8 (ENSPANG00000009379) #27	BBS10 (ENSPANG00000026355) #28	NAP1L1 (ENSPANG00000009165) #29	PHLDA1 (ENSPANG00000013115)	ENSPANG00000048738	ENSPANG00000047595	ENSPANG00000031665	KRR1 (ENSPANG00000019085) #30	GLIPR1 (ENSPANG00000005562) #31	GLIPR1L2 (ENSPANG00000036151) #32	GLIPR1L1 (ENSPANG00000032562) #33	CAPS2 (ENSPANG00000017443) #34
Vervet Monkey	MODERN SPECIES	2	CCDC59 (ENSCSAG00000003867) #9	ENSCSAG00000003868 #10	PPFIA2 (ENSCSAG00000003876) #10	ACSS3 (ENSCSAG00000003882) #11	LIN7A (ENSCSAG00000003887) #12	MYF5 (ENSCSAG00000003889) #13	MYF6 (ENSCSAG00000003893) #14	PTPRQ (ENSCSAG00000003913) #15	OTOGL (ENSCSAG00000003939) #16	PPP1R12A (ENSCSAG00000003956) #17	PAWR (ENSCSAG00000003962) #19	SYT1 (ENSCSAG00000003971) #20	ENSCSAG00000018914	ENSCSAG00000018912	ENSCSAG00000003979 #21	E2F7 (ENSCSAG00000003998) #22	CSRP2 (ENSCSAG00000004009) #24	ZDHHC17 (ENSCSAG00000004014) #25	OSBPL8 (ENSCSAG00000004024) #27	BBS10 (ENSCSAG00000004028) #28	NAP1L1 (ENSCSAG00000004030) #29	ENSCSAG00000018909	KRR1 (ENSCSAG00000004034) #30	GLIPR1 (ENSCSAG00000004038) #31	GLIPR1L2 (ENSCSAG00000004041) #32	GLIPR1L1 (ENSCSAG00000004045) #33	CAPS2 (ENSCSAG00000004056) #34	KCNC2 (ENSCSAG00000004064) #35	ATXN7L3B (ENSCSAG00000018907) #36	TRHDE (ENSCSAG00000004072) #37	TBC1D15 (ENSCSAG00000004078)
Rhinopithecus	ANCESTRAL SPECIES	358														ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35
Black snub-nosed monkey	MODERN SPECIES	416												ENSRBIG00000044674	ENSRBIG00000044553	ENSRBIG00000035549	NAV3 (ENSRBIG00000032816) #21	E2F7 (ENSRBIG00000044218) #22	CSRP2 (ENSRBIG00000001565) #24	ZDHHC17 (ENSRBIG00000036627) #25	OSBPL8 (ENSRBIG00000042807) #27	BBS10 (ENSRBIG00000044840) #28	ENSRBIG00000044471 #29	ENSRBIG00000039726	PHLDA1 (ENSRBIG00000034999)	ENSRBIG00000034429	ENSRBIG00000029304	KRR1 (ENSRBIG00000033716) #30	GLIPR1 (ENSRBIG00000034588) #31	GLIPR1L2 (ENSRBIG00000040782) #32	GLIPR1L1 (ENSRBIG00000031640) #33
Golden snub-nosed monkey	MODERN SPECIES	1031																E2F7 (ENSRROG00000031867) #22	CSRP2 (ENSRROG00000031526) #24	ZDHHC17 (ENSRROG00000039872) #25	OSBPL8 (ENSRROG00000042405) #27	BBS10 (ENSRROG00000028824) #28	ENSRROG00000014250	NAP1L1 (ENSRROG00000026775) #29	ENSRROG00000033201	PHLDA1 (ENSRROG00000007029)	ENSRROG00000024996	ENSRROG00000037708	KRR1 (ENSRROG00000029658) #30	GLIPR1 (ENSRROG00000043395) #31	ENSRROG00000041620	ENSRROG00000016846	GLIPR1L2 (ENSRROG00000017927) #32
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00910000148286	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.u.a.b #24	ENSGT00940000154980.u.a.a #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00910000147072.b	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36
Cebidae	ANCESTRAL SPECIES	2	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.u.a.a #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00910000147072.b	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37
Cebidae_a	ANCESTRAL SPECIES	8	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00550000074807.d	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT01100000263748	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980.u.a.a #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00910000147072.b	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37
Capuchin	MODERN SPECIES	67													ALCAM (ENSCCAG00000034808)	ENSCCAG00000036645	CBLB (ENSCCAG00000031829)	E2F7 (ENSCCAG00000020477) #22	CSRP2 (ENSCCAG00000027954) #24	ZDHHC17 (ENSCCAG00000024753) #25	ENSCCAG00000026832 #27	BBS10 (ENSCCAG00000010754) #28	NAP1L1 (ENSCCAG00000030757) #29	ENSCCAG00000029133	PHLDA1 (ENSCCAG00000030384)	GLIPR1 (ENSCCAG00000033906) #31	KRR1 (ENSCCAG00000021457) #30	GLIPR1L2 (ENSCCAG00000021275) #32	GLIPR1L1 (ENSCCAG00000006107) #33	CAPS2 (ENSCCAG00000033136) #34	KCNC2 (ENSCCAG00000028917) #35	ENSCCAG00000000428	ENSCCAG00000010640
Bolivian squirrel monkey	MODERN SPECIES	67	ACSS3 (ENSSBOG00000018710) #11	ENSSBOG00000022040	ENSSBOG00000034028	LIN7A (ENSSBOG00000030034) #12	MYF5 (ENSSBOG00000019536) #13	MYF6 (ENSSBOG00000021822) #14	PTPRQ (ENSSBOG00000027538) #15	OTOGL (ENSSBOG00000033681) #16	ENSSBOG00000026289	PPP1R12A (ENSSBOG00000033660) #17	PAWR (ENSSBOG00000025731) #19	SYT1 (ENSSBOG00000033271) #20	ENSSBOG00000025849	ENSSBOG00000036163	NAV3 (ENSSBOG00000036099) #21	E2F7 (ENSSBOG00000028674) #22	ENSSBOG00000014459 #24	ZDHHC17 (ENSSBOG00000036173) #25	OSBPL8 (ENSSBOG00000030671) #27	BBS10 (ENSSBOG00000022169) #28	ENSSBOG00000034714 #29	KRR1 (ENSSBOG00000029569) #30	GLIPR1 (ENSSBOG00000033770) #31	ENSSBOG00000025791	GLIPR1L2 (ENSSBOG00000027126) #32	GLIPR1L1 (ENSSBOG00000033891) #33	CAPS2 (ENSSBOG00000018991) #34	KCNC2 (ENSSBOG00000022617) #35	ATXN7L3B (ENSSBOG00000006505) #36	TRHDE (ENSSBOG00000029813) #37	TPH2 (ENSSBOG00000029996)
Marmoset	MODERN SPECIES	21	METTL25 (ENSCJAG00000019400) #8	CCDC59 (ENSCJAG00000019396) #9	PPFIA2 (ENSCJAG00000019370) #10	ACSS3 (ENSCJAG00000019352) #11	LIN7A (ENSCJAG00000019343) #12	MYF5 (ENSCJAG00000019340) #13	MYF6 (ENSCJAG00000081789) #14	PTPRQ (ENSCJAG00000019332) #15	OTOGL (ENSCJAG00000019323) #16	PPP1R12A (ENSCJAG00000019271) #17	PAWR (ENSCJAG00000019265) #19	SYT1 (ENSCJAG00000019262) #20	ENSCJAG00000078194	ENSCJAG00000078124	NAV3 (ENSCJAG00000019176) #21	E2F7 (ENSCJAG00000019162) #22	ENSCJAG00000019153 #24	ZDHHC17 (ENSCJAG00000019075) #25	OSBPL8 (ENSCJAG00000001055) #27	BBS10 (ENSCJAG00000001113) #28	ENSCJAG00000078161	NAP1L1 (ENSCJAG00000001115) #29	PHLDA1 (ENSCJAG00000072700)	ENSCJAG00000075772	ENSCJAG00000077543	ENSCJAG00000070252	ENSCJAG00000077700	KRR1 (ENSCJAG00000001181) #30	ENSCJAG00000069534	GLIPR1L2 (ENSCJAG00000001222) #32	ENSCJAG00000083004
Mas night monkey	MODERN SPECIES	833	ACSS3 (ENSANAG00000034361) #11	LIN7A (ENSANAG00000032889) #12	MYF5 (ENSANAG00000023208) #13	MYF6 (ENSANAG00000024892) #14	PTPRQ (ENSANAG00000035871) #15	OTOGL (ENSANAG00000024695) #16	ENSANAG00000036662	ENSANAG00000019658	PPP1R12A (ENSANAG00000034824) #17	PAWR (ENSANAG00000022396) #19	SYT1 (ENSANAG00000025826) #20	ENSANAG00000023157	ENSANAG00000023582	NAV3 (ENSANAG00000037686) #21	ENSANAG00000032226	E2F7 (ENSANAG00000036545) #22	ENSANAG00000021237 #24	ENSANAG00000028981	ENSANAG00000023471	ZDHHC17 (ENSANAG00000030636) #25
Tarsier	MODERN SPECIES	6007																E2F7 (ENSTSYG00000008243) #22	CSRP2 (ENSTSYG00000007974) #24	ZDHHC17 (ENSTSYG00000007950) #25
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37
Tree shrew	MODERN SPECIES	3364																E2F7 (ENSTBEG00000005417) #22
Glires	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37
Lagomorpha	ANCESTRAL SPECIES	113	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547.f.b #33	ENSGT00940000162547.f.a #33	ENSGT00940000162547.e #33
Rabbit	MODERN SPECIES	15	ENSOCUG00000036764	PPFIA2 (ENSOCUG00000015770) #10	ACSS3 (ENSOCUG00000015752) #11	LIN7A (ENSOCUG00000004203) #12	MYF5 (ENSOCUG00000025477) #13	MYF6 (ENSOCUG00000001457) #14	PTPRQ (ENSOCUG00000011455) #15	OTOGL (ENSOCUG00000014963) #16	ENSOCUG00000037584	PPP1R12A (ENSOCUG00000016701) #17	PAWR (ENSOCUG00000013722) #19	SYT1 (ENSOCUG00000014829) #20	ENSOCUG00000005148	NAV3 (ENSOCUG00000004936) #21	ENSOCUG00000025947	E2F7 (ENSOCUG00000004932) #22	ENSOCUG00000008330 #24	ENSOCUG00000027238	ZDHHC17 (ENSOCUG00000010401) #25	ENSOCUG00000028124	ENSOCUG00000032449	OSBPL8 (ENSOCUG00000010527) #27	BBS10 (ENSOCUG00000010522) #28	NAP1L1 (ENSOCUG00000013857) #29	PHLDA1 (ENSOCUG00000022950)	KRR1 (ENSOCUG00000003925) #30	GLIPR1 (ENSOCUG00000003921) #31	ENSOCUG00000031904 #33	ENSOCUG00000031541 #33	GLIPR1L2 (ENSOCUG00000003916) #32	ENSOCUG00000003909 #33
Pika	MODERN SPECIES	6842																E2F7 (ENSOPRG00000001896) #22
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00940000167051	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37
Chinese hamster chok1gshd	MODERN SPECIES	83	Ppfia2 (ENSCGRG00001020914) #10	Acss3 (ENSCGRG00001009906) #11	Lin7a (ENSCGRG00001003313) #12	Myf5 (ENSCGRG00001009370) #13	Myf6 (ENSCGRG00001006341) #14	Ptprq (ENSCGRG00001017128) #15	Otogl (ENSCGRG00001018530) #16	Ppp1r12a (ENSCGRG00001017263) #17	Pawr (ENSCGRG00001011044) #19	ENSCGRG00001009057	ENSCGRG00001010398	Syt1 (ENSCGRG00001000069) #20	Brcc3dc (ENSCGRG00001009076)	Nav3 (ENSCGRG00001022037) #21	ENSCGRG00001011762	E2f7 (ENSCGRG00001006568) #22	Csrp2 (ENSCGRG00001000844) #24	Zdhhc17 (ENSCGRG00001007660) #25	Osbpl8 (ENSCGRG00001021286) #27	Bbs10 (ENSCGRG00001010466) #28	ENSCGRG00001019257 #29	Phlda1 (ENSCGRG00001012896)	ENSCGRG00001005440	Krr1 (ENSCGRG00001005995) #30	Glipr1 (ENSCGRG00001017559) #31	ENSCGRG00001014628 #33	Caps2 (ENSCGRG00001012612) #34	Kcnc2 (ENSCGRG00001023381) #35	Atxn7l3b (ENSCGRG00001001803) #36	Trhde (ENSCGRG00001020946) #37	Tph2 (ENSCGRG00001012899)
Golden Hamster	MODERN SPECIES	628	Mettl25 (ENSMAUG00000020950) #8	Ccdc59 (ENSMAUG00000017516) #9	Ppfia2 (ENSMAUG00000021622) #10	ENSMAUG00000019031	Acss3 (ENSMAUG00000014131) #11	Lin7a (ENSMAUG00000007088) #12	Myf5 (ENSMAUG00000000933) #13	Myf6 (ENSMAUG00000019329) #14	Ptprq (ENSMAUG00000014282) #15	Otogl (ENSMAUG00000009930) #16	Ppp1r12a (ENSMAUG00000021712) #17	ENSMAUG00000008984	Syt1 (ENSMAUG00000012263) #20	ENSMAUG00000014224	Nav3 (ENSMAUG00000012505) #21	E2f7 (ENSMAUG00000010792) #22	Csrp2 (ENSMAUG00000018727) #24	Zdhhc17 (ENSMAUG00000021687) #25	Osbpl8 (ENSMAUG00000022092) #27	Bbs10 (ENSMAUG00000018240) #28	Nap1l1 (ENSMAUG00000016700) #29	ENSMAUG00000021584	Krr1 (ENSMAUG00000021283) #30	Glipr1l2 (ENSMAUG00000017252) #32	ENSMAUG00000022161 #33	Caps2 (ENSMAUG00000009850) #34	Kcnc2 (ENSMAUG00000010585) #35
Cricetidae_B	ANCESTRAL SPECIES	29	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Prairie vole	MODERN SPECIES	10	Tmtc2 (ENSMOCG00000012479) #7	Mettl25 (ENSMOCG00000018000) #8	Ccdc59 (ENSMOCG00000006690) #9	Ppfia2 (ENSMOCG00000007873) #10	Acss3 (ENSMOCG00000012086) #11	Lin7a (ENSMOCG00000021369) #12	Myf5 (ENSMOCG00000017847) #13	Myf6 (ENSMOCG00000015833) #14	Ptprq (ENSMOCG00000017842) #15	Otogl (ENSMOCG00000018409) #16	Ppp1r12a (ENSMOCG00000018418) #17	Pawr (ENSMOCG00000019570) #19	Syt1 (ENSMOCG00000012503) #20	ENSMOCG00000020523	Nav3 (ENSMOCG00000018391) #21	E2f7 (ENSMOCG00000021130) #22	Csrp2 (ENSMOCG00000007217) #24	Zdhhc17 (ENSMOCG00000002407) #25	Osbpl8 (ENSMOCG00000016633) #27	Bbs10 (ENSMOCG00000020010) #28	Nap1l1 (ENSMOCG00000012136) #29	Phlda1 (ENSMOCG00000021889)	Krr1 (ENSMOCG00000018635) #30	Glipr1 (ENSMOCG00000022141) #31	Glipr1l2 (ENSMOCG00000002411) #32	ENSMOCG00000013587 #33	Caps2 (ENSMOCG00000001012) #34	Kcnc2 (ENSMOCG00000022707) #35	Atxn7l3b (ENSMOCG00000007338) #36	ENSMOCG00000016064	Trhde (ENSMOCG00000000440) #37
Northern American deer mouse	MODERN SPECIES	9	Tmtc2 (ENSPEMG00000020725) #7	Mettl25 (ENSPEMG00000013112) #8	Ccdc59 (ENSPEMG00000031144) #9	Ppfia2 (ENSPEMG00000015993) #10	Acss3 (ENSPEMG00000017696) #11	Lin7a (ENSPEMG00000018576) #12	Myf5 (ENSPEMG00000018818) #13	Myf6 (ENSPEMG00000019751) #14	Ptprq (ENSPEMG00000019976) #15	Otogl (ENSPEMG00000005921) #16	Ppp1r12a (ENSPEMG00000011824) #17	Pawr (ENSPEMG00000031267) #19	Syt1 (ENSPEMG00000011853) #20	Brcc3dc (ENSPEMG00000012864)	Nav3 (ENSPEMG00000003783) #21	E2f7 (ENSPEMG00000013555) #22	Csrp2 (ENSPEMG00000012653) #24	Zdhhc17 (ENSPEMG00000011257) #25	Osbpl8 (ENSPEMG00000008934) #27	Bbs10 (ENSPEMG00000031116) #28	Nap1l1 (ENSPEMG00000000646) #29	Phlda1 (ENSPEMG00000020277)	Krr1 (ENSPEMG00000020228) #30	Glipr1 (ENSPEMG00000020190) #31	ENSPEMG00000020146 #32	ENSPEMG00000020129 #33	ENSPEMG00000030311 #33	Caps2 (ENSPEMG00000020036) #34	Kcnc2 (ENSPEMG00000014606) #35	Atxn7l3b (ENSPEMG00000027167) #36	Trhde (ENSPEMG00000022340) #37
Murinae	ANCESTRAL SPECIES	22	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Mus	ANCESTRAL SPECIES	23	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00900000143684	ENSGT00940000155878 #37
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00390000000360.r.b.a.b	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162547.i.a #33	ENSGT00940000162357 #32	ENSGT00940000162547.i.b #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00900000143684
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162547.i.a #33	ENSGT00940000162357 #32	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00900000143684	ENSGT00940000155878 #37
Steppe mouse	MODERN SPECIES	2517																E2f7 (ENSMSIG00000004948) #22	Csrp2 (ENSMSIG00000004873) #24	Zdhhc17 (ENSMSIG00000004833) #25
spretus	MODERN SPECIES	1	Slc6a15 (MGP_SPRETEiJ_G0016600)	Tmtc2 (MGP_SPRETEiJ_G0016601) #7	Mettl25 (MGP_SPRETEiJ_G0016602) #8	Ccdc59 (MGP_SPRETEiJ_G0016603) #9	Ppfia2 (MGP_SPRETEiJ_G0016604) #10	Acss3 (MGP_SPRETEiJ_G0016605) #11	Lin7a (MGP_SPRETEiJ_G0016606) #12	Myf5 (MGP_SPRETEiJ_G0016607) #13	Myf6 (MGP_SPRETEiJ_G0016608) #14	Ptprq (MGP_SPRETEiJ_G0016609) #15	Otogl (MGP_SPRETEiJ_G0016610) #16	Ppp1r12a (MGP_SPRETEiJ_G0016611) #17	Pawr (MGP_SPRETEiJ_G0016612) #19	Syt1 (MGP_SPRETEiJ_G0016613) #20	Nav3 (MGP_SPRETEiJ_G0016614) #21	E2f7 (MGP_SPRETEiJ_G0016615) #22	Csrp2 (MGP_SPRETEiJ_G0016616) #24	Zdhhc17 (MGP_SPRETEiJ_G0016617) #25	Osbpl8 (MGP_SPRETEiJ_G0016618) #27	Bbs10 (MGP_SPRETEiJ_G0016619) #28	Nap1l1 (MGP_SPRETEiJ_G0016620) #29	Phlda1 (MGP_SPRETEiJ_G0016621)	Krr1 (MGP_SPRETEiJ_G0016622) #30	Glipr1 (MGP_SPRETEiJ_G0016623) #31	MGP_SPRETEiJ_G0016624 #33	MGP_SPRETEiJ_G0016625 #32	MGP_SPRETEiJ_G0016626 #34	Kcnc2 (MGP_SPRETEiJ_G0016627) #35	Atxn7l3b (MGP_SPRETEiJ_G0016628) #36	MGP_SPRETEiJ_G0016629	Trhde (MGP_SPRETEiJ_G0016630) #37
Mouse	MODERN SPECIES	1	Tmtc2 (ENSMUSG00000036019) #7	Mettl25 (ENSMUSG00000036009) #8	Ccdc59 (ENSMUSG00000019897) #9	Ppfia2 (ENSMUSG00000053825) #10	Acss3 (ENSMUSG00000035948) #11	Lin7a (ENSMUSG00000019906) #12	Myf5 (ENSMUSG00000000435) #13	Myf6 (ENSMUSG00000035923) #14	Ptprq (ENSMUSG00000035916) #15	Otogl (ENSMUSG00000091455) #16	Ppp1r12a (ENSMUSG00000019907) #17	Pawr (ENSMUSG00000035873) #19	Syt1 (ENSMUSG00000035864) #20	Brcc3dc (ENSMUSG00000112039)	Nav3 (ENSMUSG00000020181) #21	E2f7 (ENSMUSG00000020185) #22	Csrp2 (ENSMUSG00000020186) #24	Zdhhc17 (ENSMUSG00000035798) #25	Osbpl8 (ENSMUSG00000020189) #27	Bbs10 (ENSMUSG00000035759) #28	Nap1l1 (ENSMUSG00000058799) #29	Phlda1 (ENSMUSG00000020205)	Krr1 (ENSMUSG00000063334) #30	Glipr1 (ENSMUSG00000056888) #31	Glipr1l1 (ENSMUSG00000020213) #33	Glipr1l2 (ENSMUSG00000020214) #32	Glipr1l3 (ENSMUSG00000112611) #33	Caps2 (ENSMUSG00000035694) #34	Kcnc2 (ENSMUSG00000035681) #35	Atxn7l3b (ENSMUSG00000074748) #36	Trhde (ENSMUSG00000050663) #37
Ryukyu mouse	MODERN SPECIES	1	Slc6a15 (MGP_CAROLIEiJ_G0015778)	Tmtc2 (MGP_CAROLIEiJ_G0015779) #7	Mettl25 (MGP_CAROLIEiJ_G0015780) #8	Ccdc59 (MGP_CAROLIEiJ_G0015781) #9	Ppfia2 (MGP_CAROLIEiJ_G0015782) #10	Acss3 (MGP_CAROLIEiJ_G0015783) #11	Lin7a (MGP_CAROLIEiJ_G0015784) #12	Myf5 (MGP_CAROLIEiJ_G0015785) #13	Myf6 (MGP_CAROLIEiJ_G0015786) #14	Ptprq (MGP_CAROLIEiJ_G0015787) #15	Otogl (MGP_CAROLIEiJ_G0015788) #16	Ppp1r12a (MGP_CAROLIEiJ_G0015789) #17	MGP_CAROLIEiJ_G0015790 #19	Syt1 (MGP_CAROLIEiJ_G0015791) #20	Nav3 (MGP_CAROLIEiJ_G0015792) #21	E2f7 (MGP_CAROLIEiJ_G0015793) #22	Csrp2 (MGP_CAROLIEiJ_G0015794) #24	Zdhhc17 (MGP_CAROLIEiJ_G0015795) #25	Osbpl8 (MGP_CAROLIEiJ_G0015796) #27	Bbs10 (MGP_CAROLIEiJ_G0015797) #28	Nap1l1 (MGP_CAROLIEiJ_G0015798) #29	Phlda1 (MGP_CAROLIEiJ_G0015799)	Krr1 (MGP_CAROLIEiJ_G0015800) #30	Glipr1 (MGP_CAROLIEiJ_G0015801) #31	Glipr1l2 (MGP_CAROLIEiJ_G0015802) #32	MGP_CAROLIEiJ_G0015803 #33	Caps2 (MGP_CAROLIEiJ_G0015804) #34	Kcnc2 (MGP_CAROLIEiJ_G0015805) #35	Atxn7l3b (MGP_CAROLIEiJ_G0015806) #36	MGP_CAROLIEiJ_G0015807	Trhde (MGP_CAROLIEiJ_G0015808) #37
Shrew mouse	MODERN SPECIES	22	Slc6a15 (MGP_PahariEiJ_G0031309)	Tmtc2 (MGP_PahariEiJ_G0031308) #7	Mettl25 (MGP_PahariEiJ_G0031307) #8	Ccdc59 (MGP_PahariEiJ_G0031306) #9	Ppfia2 (MGP_PahariEiJ_G0031305) #10	Acss3 (MGP_PahariEiJ_G0031304) #11	Lin7a (MGP_PahariEiJ_G0031303) #12	Myf5 (MGP_PahariEiJ_G0031302) #13	Myf6 (MGP_PahariEiJ_G0031301) #14	Ptprq (MGP_PahariEiJ_G0031300) #15	MGP_PahariEiJ_G0031299 #16	Ppp1r12a (MGP_PahariEiJ_G0031298) #17	Pawr (MGP_PahariEiJ_G0031297) #19	Syt1 (MGP_PahariEiJ_G0031296) #20	MGP_PahariEiJ_G0031295 #21	E2f7 (MGP_PahariEiJ_G0031294) #22	Csrp2 (MGP_PahariEiJ_G0031293) #24	Zdhhc17 (MGP_PahariEiJ_G0031292) #25	Osbpl8 (MGP_PahariEiJ_G0031291) #27	Bbs10 (MGP_PahariEiJ_G0031290) #28	MGP_PahariEiJ_G0031289 #29	Phlda1 (MGP_PahariEiJ_G0031288)	Krr1 (MGP_PahariEiJ_G0031287) #30	Glipr1 (MGP_PahariEiJ_G0031286) #31	Glipr1l2 (MGP_PahariEiJ_G0031285) #32	MGP_PahariEiJ_G0031284 #33	Caps2 (MGP_PahariEiJ_G0031283) #34	Kcnc2 (MGP_PahariEiJ_G0031282) #35	Atxn7l3b (MGP_PahariEiJ_G0031281) #36	MGP_PahariEiJ_G0031280	Trhde (MGP_PahariEiJ_G0031279) #37
Rat	MODERN SPECIES	17	Mettl25 (ENSRNOG00000027451) #8	Ccdc59 (ENSRNOG00000004183) #9	ENSRNOG00000063471	Ppfia2 (ENSRNOG00000004353) #10	Acss3 (ENSRNOG00000004448) #11	Lin7a (ENSRNOG00000004527) #12	Myf5 (ENSRNOG00000004768) #13	Myf6 (ENSRNOG00000004878) #14	Ptprq (ENSRNOG00000056915) #15	Otogl (ENSRNOG00000030316) #16	Ppp1r12a (ENSRNOG00000004925) #17	Pawr (ENSRNOG00000005917) #19	Syt1 (ENSRNOG00000006426) #20	Brcc3dc (ENSRNOG00000070196)	Nav3 (ENSRNOG00000052157) #21	E2f7 (ENSRNOG00000026252) #22	Csrp2 (ENSRNOG00000003772) #24	Zdhhc17 (ENSRNOG00000003803) #25	Osbpl8 (ENSRNOG00000026962) #27	ENSRNOG00000062798	Bbs10 (ENSRNOG00000026913) #28	Nap1l1 (ENSRNOG00000003890) #29	Phlda1 (ENSRNOG00000004019)	Krr1 (ENSRNOG00000004035) #30	Glipr1 (ENSRNOG00000026644) #31	Glipr1l2 (ENSRNOG00000049053) #32	Glipr1l1 (ENSRNOG00000026634) #33	Caps2 (ENSRNOG00000026600) #34	Kcnc2 (ENSRNOG00000004077) #35	Atxn7l3b (ENSRNOG00000059744) #36	Trhde (ENSRNOG00000005278) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	494	Ccdc59 (ENSNGAG00000023637) #9	ENSNGAG00000012599	Ppfia2 (ENSNGAG00000022807) #10	Acss3 (ENSNGAG00000015078) #11	Lin7a (ENSNGAG00000022827) #12	Myf5 (ENSNGAG00000003539) #13	Myf6 (ENSNGAG00000023390) #14	Ptprq (ENSNGAG00000024172) #15	Otogl (ENSNGAG00000022483) #16	ENSNGAG00000024231	Ppp1r12a (ENSNGAG00000023300) #17	Pawr (ENSNGAG00000015922) #19	Syt1 (ENSNGAG00000020988) #20	Nav3 (ENSNGAG00000024210) #21	ENSNGAG00000024182	E2f7 (ENSNGAG00000023644) #22	ENSNGAG00000023257 #24	Zdhhc17 (ENSNGAG00000009049) #25	Osbpl8 (ENSNGAG00000014231) #27	Bbs10 (ENSNGAG00000022298) #28	ENSNGAG00000014133	ENSNGAG00000022884
Lesser Egyptian jerboa	MODERN SPECIES	42	Ccdc59 (ENSJJAG00000015263) #9	ENSJJAG00000003779	Ppfia2 (ENSJJAG00000006298) #10	Acss3 (ENSJJAG00000008308) #11	Lin7a (ENSJJAG00000023503) #12	Myf5 (ENSJJAG00000003407) #13	Myf6 (ENSJJAG00000011250) #14	Ptprq (ENSJJAG00000017741) #15	Otogl (ENSJJAG00000019493) #16	Ppp1r12a (ENSJJAG00000023796) #17	Pawr (ENSJJAG00000018666) #19	Syt1 (ENSJJAG00000023399) #20	ENSJJAG00000022372	Nav3 (ENSJJAG00000012332) #21	ENSJJAG00000010552	E2f7 (ENSJJAG00000007878) #22	ENSJJAG00000005723	ENSJJAG00000014135 #24	ENSJJAG00000011419 #25	Osbpl8 (ENSJJAG00000024252) #27	Bbs10 (ENSJJAG00000023405) #28	ENSJJAG00000024142	Nap1l1 (ENSJJAG00000023205) #29	Phlda1 (ENSJJAG00000023924)	ENSJJAG00000023900 #30	ENSJJAG00000013157 #32	ENSJJAG00000023384 #31	ENSJJAG00000022416 #33	ENSJJAG00000009366 #34	Atxn7l3b (ENSJJAG00000002351) #36	ENSJJAG00000016750
Kangaroo rat	MODERN SPECIES	322	ENSDORG00000008703	Slc6a15 (ENSDORG00000000388)	Tmtc2 (ENSDORG00000005875) #7	Mettl25 (ENSDORG00000003006) #8	Ppfia2 (ENSDORG00000007289) #10	Acss3 (ENSDORG00000007288) #11	Lin7a (ENSDORG00000014355) #12	Myf5 (ENSDORG00000015437) #13	Myf6 (ENSDORG00000015435) #14	Ptprq (ENSDORG00000023208) #15	Otogl (ENSDORG00000028677) #16	Ppp1r12a (ENSDORG00000007157) #17	Pawr (ENSDORG00000029489) #19	Syt1 (ENSDORG00000003724) #20	Nav3 (ENSDORG00000011080) #21	ENSDORG00000026154 #22	Csrp2 (ENSDORG00000012441) #24	Zdhhc17 (ENSDORG00000012435) #25	Osbpl8 (ENSDORG00000000670) #27	Bbs10 (ENSDORG00000000668) #28	Nap1l1 (ENSDORG00000029138) #29	Phlda1 (ENSDORG00000027757)	ENSDORG00000023399	ENSDORG00000004614 #30	Glipr1 (ENSDORG00000004613) #31	ENSDORG00000027121 #32	Kcnc2 (ENSDORG00000000056) #35	Atxn7l3b (ENSDORG00000025438) #36	ENSDORG00000013399 #37	ENSDORG00000028797 #37	Tph2 (ENSDORG00000000779)
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a.hb.b #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a.hb.b.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000036317	PPFIA2 (ENSHGLG00000000429) #10	ACSS3 (ENSHGLG00000004579) #11	ENSHGLG00000003757 #12	MYF5 (ENSHGLG00000003654) #13	MYF6 (ENSHGLG00000003419) #14	PTPRQ (ENSHGLG00000011762) #15	OTOGL (ENSHGLG00000013295) #16	PPP1R12A (ENSHGLG00000014201) #17	ENSHGLG00000036431	PAWR (ENSHGLG00000017940) #19	SYT1 (ENSHGLG00000047548) #20	ENSHGLG00000042592	ENSHGLG00000010015	NAV3 (ENSHGLG00000012083) #21	E2F7 (ENSHGLG00000006491) #22	ENSHGLG00000008206 #24	ENSHGLG00000009233 #25	ENSHGLG00000004489	ENSHGLG00000044176	ENSHGLG00000008641	ENSHGLG00000033319	ENSHGLG00000039577	ENSHGLG00000008111 #27	BBS10 (ENSHGLG00000041362) #28	ENSHGLG00000046259	ENSHGLG00000014189 #29	ENSHGLG00000045931	KRR1 (ENSHGLG00000004459) #30	GLIPR1 (ENSHGLG00000037317) #31	ENSHGLG00000037384
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a.hb.b.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Guinea pig	MODERN SPECIES	9	SLC6A15 (ENSCPOG00000003103)	TMTC2 (ENSCPOG00000005425) #7	METTL25 (ENSCPOG00000011621) #8	CCDC59 (ENSCPOG00000036718) #9	PPFIA2 (ENSCPOG00000003459) #10	ACSS3 (ENSCPOG00000003451) #11	LIN7A (ENSCPOG00000001373) #12	MYF5 (ENSCPOG00000007766) #13	MYF6 (ENSCPOG00000030745) #14	PTPRQ (ENSCPOG00000031105) #15	OTOGL (ENSCPOG00000022231) #16	PPP1R12A (ENSCPOG00000004019) #17	PAWR (ENSCPOG00000002469) #19	SYT1 (ENSCPOG00000002054) #20	NAV3 (ENSCPOG00000015431) #21	E2F7 (ENSCPOG00000007375) #22	CSRP2 (ENSCPOG00000031460) #24	ZDHHC17 (ENSCPOG00000012534) #25	OSBPL8 (ENSCPOG00000001130) #27	BBS10 (ENSCPOG00000038158) #28	NAP1L1 (ENSCPOG00000019420) #29	PHLDA1 (ENSCPOG00000003245)	KRR1 (ENSCPOG00000014353) #30	GLIPR1 (ENSCPOG00000014351) #31	ENSCPOG00000013925 #32	ENSCPOG00000011301	GLIPR1L1 (ENSCPOG00000011726) #33	CAPS2 (ENSCPOG00000011709) #34	KCNC2 (ENSCPOG00000003474) #35	ATXN7L3B (ENSCPOG00000040398) #36	TRHDE (ENSCPOG00000007500) #37
Hystricomorpha_b	ANCESTRAL SPECIES	13	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a.hb.b.a #29	ENSGT00440000039564.b	ENSGT00390000018775 #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Long-tailed chinchilla	MODERN SPECIES	112	TMTC2 (ENSCLAG00000008519) #7	METTL25 (ENSCLAG00000014989) #8	CCDC59 (ENSCLAG00000015050) #9	PPFIA2 (ENSCLAG00000008120) #10	ACSS3 (ENSCLAG00000005808) #11	ENSCLAG00000013764 #12	MYF5 (ENSCLAG00000014410) #13	MYF6 (ENSCLAG00000013875) #14	PTPRQ (ENSCLAG00000012232) #15	OTOGL (ENSCLAG00000006526) #16	PPP1R12A (ENSCLAG00000006399) #17	PAWR (ENSCLAG00000008196) #19	SYT1 (ENSCLAG00000004862) #20	ENSCLAG00000005685	NAV3 (ENSCLAG00000012036) #21	E2F7 (ENSCLAG00000007164) #22	CSRP2 (ENSCLAG00000008899) #24	ZDHHC17 (ENSCLAG00000011124) #25	ENSCLAG00000017859	OSBPL8 (ENSCLAG00000010204) #27	BBS10 (ENSCLAG00000007902) #28	ENSCLAG00000005333 #29	PHLDA1 (ENSCLAG00000006934)	KRR1 (ENSCLAG00000005111) #30	GLIPR1 (ENSCLAG00000006364) #31	GLIPR1L2 (ENSCLAG00000006004) #32	GLIPR1L1 (ENSCLAG00000005153) #33	ENSCLAG00000004453 #34	KCNC2 (ENSCLAG00000009275) #35	ATXN7L3B (ENSCLAG00000017725) #36	TRHDE (ENSCLAG00000005841) #37
Degu	MODERN SPECIES	45	PPFIA2 (ENSODEG00000007419) #10	ACSS3 (ENSODEG00000007503) #11	ENSODEG00000019454	LIN7A (ENSODEG00000007832) #12	MYF5 (ENSODEG00000007510) #13	MYF6 (ENSODEG00000007305) #14	PTPRQ (ENSODEG00000007761) #15	OTOGL (ENSODEG00000007895) #16	PPP1R12A (ENSODEG00000009363) #17	ENSODEG00000019636	PAWR (ENSODEG00000008160) #19	ENSODEG00000007440	SYT1 (ENSODEG00000008387) #20	ENSODEG00000007970	NAV3 (ENSODEG00000010398) #21	ENSODEG00000008575 #22	CSRP2 (ENSODEG00000008449) #24	ZDHHC17 (ENSODEG00000010670) #25	ENSODEG00000007367	OSBPL8 (ENSODEG00000007618) #27	BBS10 (ENSODEG00000007380) #28	ENSODEG00000007344 #29	PHLDA1 (ENSODEG00000019456)	ENSODEG00000006609	ENSODEG00000019616	ENSODEG00000007152 #30	GLIPR1 (ENSODEG00000008406) #31	ENSODEG00000019533	TMTC1 (ENSODEG00000007589)	ENSODEG00000006579	ERGIC2 (ENSODEG00000007081)
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00960000192410	ENSGT00390000002417 #28	ENSGT00940000153362.a.hb.b #29	ENSGT00440000039564.b	ENSGT00390000018775.ab #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a.hb.b #29	ENSGT00440000039564.b	ENSGT00390000018775.ab #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00940000157371 #35	ENSGT00940000162576 #36	ENSGT00940000155878 #37	ENSGT00950000182885.A.b
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00940000157277	ENSGT00940000156144 #7	ENSGT00530000063745.b #8	ENSGT00390000006546 #9	ENSGT01050000244900.a.a.a.a.b #10	ENSGT00940000157479 #11	ENSGT00940000153222.a.a #12	ENSGT00950000182959.a.a #13	ENSGT00950000182959.a.b.b.a #14	ENSGT00940000159215 #15	ENSGT00940000160698 #16	ENSGT00940000156120.a #17	ENSGT00390000000406 #19	ENSGT00940000155394 #20	ENSGT00940000158014 #21	ENSGT00940000157713 #22	ENSGT00940000154980 #24	ENSGT00530000063074.b.b #25	ENSGT00940000156622 #27	ENSGT00390000002417 #28	ENSGT00940000153362.a.hb.b #29	ENSGT00440000039564.b	ENSGT00390000018775.ab #30	ENSGT00940000160727 #31	ENSGT00940000162357 #32	ENSGT00940000162547 #33	ENSGT00940000159670 #34	ENSGT00390000001376	ENSGT00390000008294.e.b.a.b	ENSGT00940000157371 #35	ENSGT00940000162576 #36
Arctic ground squirrel	MODERN SPECIES	177											OTOGL (ENSUPAG00010005372) #16	PPP1R12A (ENSUPAG00010005325) #17	PAWR (ENSUPAG00010005305) #19	SYT1 (ENSUPAG00010005294) #20	NAV3 (ENSUPAG00010005261) #21	E2F7 (ENSUPAG00010005233) #22	CSRP2 (ENSUPAG00010005224) #24	ZDHHC17 (ENSUPAG00010005181) #25	OSBPL8 (ENSUPAG00010005095) #27	BBS10 (ENSUPAG00010005089) #28	ENSUPAG00010004967	ENSUPAG00010004960
Squirrel	MODERN SPECIES	168															NAV3 (ENSSTOG00000012725) #21	E2F7 (ENSSTOG00000007887) #22	CSRP2 (ENSSTOG00000010876) #24	ZDHHC17 (ENSSTOG00000010869) #25	OSBPL8 (ENSSTOG00000011866) #27	BBS10 (ENSSTOG00000011855) #28	NAP1L1 (ENSSTOG00000003046) #29	PHLDA1 (ENSSTOG00000020332)	KRR1 (ENSSTOG00000003620) #30	GLIPR1 (ENSSTOG00000003613) #31	ENSSTOG00000024468 #32	GLIPR1L1 (ENSSTOG00000020403) #33	ENSSTOG00000003438 #34	ENSSTOG00000028374	KCNC2 (ENSSTOG00000004842) #35	ATXN7L3B (ENSSTOG00000023624) #36	TRHDE (ENSSTOG00000003761) #37
Alpin marmot	MODERN SPECIES	11	SLC6A15 (ENSMMMG00000001050)	ENSMMMG00000001090	TMTC2 (ENSMMMG00000001120) #7	METTL25 (ENSMMMG00000001158) #8	CCDC59 (ENSMMMG00000001213) #9	PPFIA2 (ENSMMMG00000001244) #10	ACSS3 (ENSMMMG00000001391) #11	LIN7A (ENSMMMG00000001429) #12	MYF5 (ENSMMMG00000001446) #13	MYF6 (ENSMMMG00000001463) #14	PTPRQ (ENSMMMG00000001485) #15	OTOGL (ENSMMMG00000001599) #16	PPP1R12A (ENSMMMG00000001751) #17	SYT1 (ENSMMMG00000001991) #20	NAV3 (ENSMMMG00000002035) #21	E2F7 (ENSMMMG00000002119) #22	ENSMMMG00000002164 #24	ZDHHC17 (ENSMMMG00000002185) #25	OSBPL8 (ENSMMMG00000002240) #27	BBS10 (ENSMMMG00000002273) #28	ENSMMMG00000002289 #29	PHLDA1 (ENSMMMG00000002474)	KRR1 (ENSMMMG00000002493) #30	GLIPR1 (ENSMMMG00000002546) #31	GLIPR1L2 (ENSMMMG00000002582) #32	GLIPR1L1 (ENSMMMG00000002592) #33	CAPS2 (ENSMMMG00000002609) #34	ENSMMMG00000002677	KCNC2 (ENSMMMG00000002683) #35	ENSMMMG00000002698	ATXN7L3B (ENSMMMG00000002707) #36
Eurasian red squirrel	MODERN SPECIES	14	METTL25 (ENSSVLG00005002343) #8	CCDC59 (ENSSVLG00005002316) #9	PPFIA2 (ENSSVLG00005001201) #10	ACSS3 (ENSSVLG00005000239) #11	BLVRB (ENSSVLG00005025266)	LIN7A (ENSSVLG00005025250) #12	MYF5 (ENSSVLG00005025239) #13	MYF6 (ENSSVLG00005025222) #14	PTPRQ (ENSSVLG00005025041) #15	OTOGL (ENSSVLG00005024601) #16	PPP1R12A (ENSSVLG00005024407) #17	PAWR (ENSSVLG00005024360) #19	SYT1 (ENSSVLG00005024299) #20	NAV3 (ENSSVLG00005023837) #21	ENSSVLG00005023728	E2F7 (ENSSVLG00005023615) #22	ENSSVLG00005023521 #24	ZDHHC17 (ENSSVLG00005023480) #25	OSBPL8 (ENSSVLG00005023307) #27	ENSSVLG00005023266	BBS10 (ENSSVLG00005023257) #28	NAP1L1 (ENSSVLG00005023160) #29	ENSSVLG00005023108	KRR1 (ENSSVLG00005023069) #30	GLIPR1 (ENSSVLG00005023023) #31	ENSSVLG00005023001	GLIPR1L2 (ENSSVLG00005022916) #32	GLIPR1L1 (ENSSVLG00005022861) #33	CAPS2 (ENSSVLG00005022512) #34	KCNC2 (ENSSVLG00005022353) #35	ATXN7L3B (ENSSVLG00005022316) #36