Murinae	ANCESTRAL SPECIES	23	ENSGT00390000010017 #7	ENSGT00390000000436 #8	ENSGT00390000014879.c.b #9	ENSGT00950000182869.e.b.a #10	ENSGT00940000161614 #11	ENSGT00940000156918 #12	ENSGT00950000182937.A.b #13	ENSGT00940000158930.d #14	ENSGT00940000157991 #15	ENSGT00940000156962 #16	ENSGT00940000155760 #17	ENSGT00940000160545 #18	ENSGT01030000234574.B.c.b.b #19	ENSGT00390000003246 #20	ENSGT00390000000134.b #21	ENSGT00940000159875 #22	ENSGT00940000156888 #23	ENSGT00390000003458 #24	ENSGT00940000161813 #25	ENSGT00940000161410 #26	ENSGT00940000162281 #27	ENSGT00940000162466 #28	ENSGT00940000162784 #29	ENSGT00940000161015 #30	ENSGT00940000156239 #31	ENSGT00730000111181 #32	ENSGT00940000160760.b #33	ENSGT00940000158064 #34	ENSGT00940000156991 #35	ENSGT00960000193286	ENSGT00940000155860 #36
Mus	ANCESTRAL SPECIES	6	ENSGT00390000010017 #7	ENSGT00390000000436 #8	ENSGT00390000014879.c.b #9	ENSGT00950000182869.e.b.a #10	ENSGT00940000161614 #11	ENSGT00940000156918 #12	ENSGT00950000182937.A.b #13	ENSGT00940000158930.d #14	ENSGT00940000157991 #15	ENSGT00940000156962 #16	ENSGT00940000155760 #17	ENSGT00940000160545 #18	ENSGT01030000234574.B.c.b.b #19	ENSGT00390000003246 #20	ENSGT00390000000134.b #21	ENSGT00940000159875 #22	ENSGT00940000156888 #23	ENSGT00390000003458 #24	ENSGT00940000161813 #25	ENSGT00940000161410 #26	ENSGT00940000162281 #27	ENSGT00940000162466 #28	ENSGT00940000162784 #29	ENSGT00940000161015 #30	ENSGT00940000156239 #31	ENSGT00730000111181 #32	ENSGT00940000160760.b #33	ENSGT00940000158064 #34	ENSGT00940000156991 #35	ENSGT00960000193286	ENSGT00940000155860 #36
Shrew mouse	MODERN SPECIES	10	Mrps31 (MGP_PahariEiJ_G0021364) #7	Smim19 (MGP_PahariEiJ_G0021365) #8	Slc20a2 (MGP_PahariEiJ_G0021366) #9	Vdac3 (MGP_PahariEiJ_G0021367) #10	Dkk4 (MGP_PahariEiJ_G0021368) #11	Polb (MGP_PahariEiJ_G0021369) #12	Ikbkb (MGP_PahariEiJ_G0021370) #13	Plat (MGP_PahariEiJ_G0021371) #14	Ap3m2 (MGP_PahariEiJ_G0021372) #15	Kat6a (MGP_PahariEiJ_G0021373) #16	Ank1 (MGP_PahariEiJ_G0021374) #17	Nkx6-3 (MGP_PahariEiJ_G0021375) #18	Gpat4 (MGP_PahariEiJ_G0021376) #19	Gins4 (MGP_PahariEiJ_G0021377) #20	Golga7 (MGP_PahariEiJ_G0021378) #21	Sfrp1 (MGP_PahariEiJ_G0021379) #22	Zmat4 (MGP_PahariEiJ_G0021380) #23	Tcim (MGP_PahariEiJ_G0021381) #24	Ido2 (MGP_PahariEiJ_G0021382) #25	Ido1 (MGP_PahariEiJ_G0021383) #26	Adam18 (MGP_PahariEiJ_G0021384) #27	MGP_PahariEiJ_G0021385 #28	MGP_PahariEiJ_G0021386 #29	Adam32 (MGP_PahariEiJ_G0021387) #30	Adam9 (MGP_PahariEiJ_G0021388) #31	Tm2d2 (MGP_PahariEiJ_G0021389) #32	Htra4 (MGP_PahariEiJ_G0021390) #33	Plekha2 (MGP_PahariEiJ_G0021391) #34	Tacc1 (MGP_PahariEiJ_G0021392) #35	Fgfr1 (MGP_PahariEiJ_G0021393) #36	Letm2 (MGP_PahariEiJ_G0021394) #37
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000010017 #7	ENSGT00390000000436 #8	ENSGT00390000014879.c.b #9	ENSGT00950000182869.e.b.a #10	ENSGT00940000161614 #11	ENSGT00940000156918 #12	ENSGT00950000182937.A.b #13	ENSGT00940000158930.d #14	ENSGT00940000157991 #15	ENSGT00940000156962 #16	ENSGT00940000155760 #17	ENSGT00940000160545 #18	ENSGT01030000234574.B.c.b.b #19	ENSGT00390000003246 #20	ENSGT00390000000134.b #21	ENSGT00940000159875 #22	ENSGT00940000156888 #23	ENSGT00390000003458 #24	ENSGT00940000161813 #25	ENSGT00940000161410 #26	ENSGT00940000162281 #27	ENSGT00940000162466 #28	ENSGT00940000162784 #29	ENSGT00940000161015 #30	ENSGT00940000156239 #31	ENSGT00730000111181 #32	ENSGT00940000160760.b #33	ENSGT00940000158064 #34	ENSGT00940000156991 #35	ENSGT00960000193286	ENSGT00940000155860 #36
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000010017 #7	ENSGT00390000000436 #8	ENSGT00390000014879.c.b #9	ENSGT00950000182869.e.b.a #10	ENSGT00940000161614 #11	ENSGT00940000156918 #12	ENSGT00950000182937.A.b #13	ENSGT00940000158930.d #14	ENSGT00940000157991 #15	ENSGT00940000156962 #16	ENSGT00940000155760 #17	ENSGT00940000160545 #18	ENSGT01030000234574.B.c.b.b #19	ENSGT00390000003246 #20	ENSGT00390000000134.b #21	ENSGT00940000159875 #22	ENSGT00940000156888 #23	ENSGT00390000003458 #24	ENSGT00940000161813 #25	ENSGT00940000161410 #26	ENSGT00940000162281 #27	ENSGT00940000162466 #28	ENSGT00940000162784 #29	ENSGT00940000161015 #30	ENSGT00940000156239 #31	ENSGT00730000111181 #32	ENSGT00940000160760.b #33	ENSGT00940000158064 #34	ENSGT00940000156991 #35	ENSGT00960000193286	ENSGT00940000155860 #36
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000010017 #7	ENSGT00390000000436 #8	ENSGT00390000014879.c.b #9	ENSGT00950000182869.e.b.a #10	ENSGT00940000161614 #11	ENSGT00940000156918 #12	ENSGT00950000182937.A.b #13	ENSGT00940000158930.d #14	ENSGT00940000157991 #15	ENSGT00940000156962 #16	ENSGT00940000155760 #17	ENSGT00940000160545 #18	ENSGT01030000234574.B.c.b.b #19	ENSGT00390000003246 #20	ENSGT00390000000134.b #21	ENSGT00940000159875 #22	ENSGT00940000156888 #23	ENSGT00390000003458 #24	ENSGT00940000161813 #25	ENSGT00940000161410 #26	ENSGT00940000162281 #27	ENSGT00940000162466 #28	ENSGT00940000162784 #29	ENSGT00940000161015 #30	ENSGT00940000156239 #31	ENSGT00730000111181 #32	ENSGT00940000160760.b #33	ENSGT00940000158064 #34	ENSGT00940000156991 #35	ENSGT00960000193286	ENSGT00940000155860 #36
spretus	MODERN SPECIES	17	Mrps31 (MGP_SPRETEiJ_G0032012) #7	Smim19 (MGP_SPRETEiJ_G0032013) #8	Slc20a2 (MGP_SPRETEiJ_G0032014) #9	Vdac3 (MGP_SPRETEiJ_G0032015) #10	Dkk4 (MGP_SPRETEiJ_G0032016) #11	Polb (MGP_SPRETEiJ_G0032017) #12	Ikbkb (MGP_SPRETEiJ_G0032018) #13	Plat (MGP_SPRETEiJ_G0032019) #14	Ap3m2 (MGP_SPRETEiJ_G0032020) #15	Kat6a (MGP_SPRETEiJ_G0032021) #16	Ank1 (MGP_SPRETEiJ_G0032022) #17	Nkx6-3 (MGP_SPRETEiJ_G0032023) #18	Gpat4 (MGP_SPRETEiJ_G0032024) #19	Gins4 (MGP_SPRETEiJ_G0032025) #20	Golga7 (MGP_SPRETEiJ_G0032026) #21	Sfrp1 (MGP_SPRETEiJ_G0032027) #22	Zmat4 (MGP_SPRETEiJ_G0032028) #23	MGP_SPRETEiJ_G0032029	Tcim (MGP_SPRETEiJ_G0032030) #24	Ido2 (MGP_SPRETEiJ_G0032031) #25	Ido1 (MGP_SPRETEiJ_G0032032) #26	Adam18 (MGP_SPRETEiJ_G0032033) #27	Adam3 (MGP_SPRETEiJ_G0032034) #28	Adam5 (MGP_SPRETEiJ_G0032035) #29	Adam32 (MGP_SPRETEiJ_G0032036) #30	Adam9 (MGP_SPRETEiJ_G0032037) #31	Tm2d2 (MGP_SPRETEiJ_G0032038) #32	Htra4 (MGP_SPRETEiJ_G0032039) #33	Plekha2 (MGP_SPRETEiJ_G0032040) #34	Tacc1 (MGP_SPRETEiJ_G0032041) #35	Fgfr1 (MGP_SPRETEiJ_G0032042) #36
Steppe mouse	MODERN SPECIES	3292	Slc20a2 (ENSMSIG00000022322) #9	Vdac3 (ENSMSIG00000022306) #10	Dkk4 (ENSMSIG00000022292) #11	Polb (ENSMSIG00000022265) #12	Ikbkb (ENSMSIG00000022158) #13	Plat (ENSMSIG00000022138) #14	Ap3m2 (ENSMSIG00000021987) #15	ENSMSIG00000021979	ENSMSIG00000021960	Kat6a (ENSMSIG00000021939) #16	Ank1 (ENSMSIG00000021183) #17	Nkx6-3 (ENSMSIG00000021160) #18	Gpat4 (ENSMSIG00000021135) #19	Gins4 (ENSMSIG00000021124) #20	ENSMSIG00000021106 #21	Sfrp1 (ENSMSIG00000021081) #22	Zmat4 (ENSMSIG00000021053) #23	Tcim (ENSMSIG00000021048) #24	Ido2 (ENSMSIG00000021020) #25	Ido1 (ENSMSIG00000020979) #26	Adam18 (ENSMSIG00000020940) #27	Adam3 (ENSMSIG00000020764) #28	Adam5 (ENSMSIG00000020611) #29	Adam32 (ENSMSIG00000020547) #30	Adam9 (ENSMSIG00000020432) #31	Tm2d2 (ENSMSIG00000020418) #32	Htra4 (ENSMSIG00000020401) #33	Plekha2 (ENSMSIG00000020367) #34	Tacc1 (ENSMSIG00000020252) #35	ENSMSIG00000020242	Fgfr1 (ENSMSIG00000020120) #36
Mouse	MODERN SPECIES	17	Mrps31 (ENSMUSG00000031533) #7	Smim19 (ENSMUSG00000031534) #8	Slc20a2 (ENSMUSG00000037656) #9	Vdac3 (ENSMUSG00000008892) #10	Dkk4 (ENSMUSG00000031535) #11	Polb (ENSMUSG00000031536) #12	Ikbkb (ENSMUSG00000031537) #13	Plat (ENSMUSG00000031538) #14	Ap3m2 (ENSMUSG00000031539) #15	Kat6a (ENSMUSG00000031540) #16	Ank1 (ENSMUSG00000031543) #17	Nkx6-3 (ENSMUSG00000063672) #18	Gpat4 (ENSMUSG00000031545) #19	Gins4 (ENSMUSG00000031546) #20	Golga7 (ENSMUSG00000015341) #21	Sfrp1 (ENSMUSG00000031548) #22	Zmat4 (ENSMUSG00000037492) #23	Tcim (ENSMUSG00000056313) #24	Ido2 (ENSMUSG00000031549) #25	Ido1 (ENSMUSG00000031551) #26	Adam18 (ENSMUSG00000031552) #27	Adam3 (ENSMUSG00000031553) #28	Adam5 (ENSMUSG00000031554) #29	Adam32 (ENSMUSG00000037437) #30	Adam9 (ENSMUSG00000031555) #31	Tm2d2 (ENSMUSG00000031556) #32	Htra4 (ENSMUSG00000037406) #33	Plekha2 (ENSMUSG00000031557) #34	Tacc1 (ENSMUSG00000065954) #35	Fgfr1 (ENSMUSG00000031565) #36	Letm2 (ENSMUSG00000037363) #37
Ryukyu mouse	MODERN SPECIES	17	MGP_CAROLIEiJ_G0030893	MGP_CAROLIEiJ_G0030894	MGP_CAROLIEiJ_G0030895	Thsd1 (MGP_CAROLIEiJ_G0030896)	Slc25a15 (MGP_CAROLIEiJ_G0030897)	MGP_CAROLIEiJ_G0030898 #9	Vdac3 (MGP_CAROLIEiJ_G0030899) #10	MGP_CAROLIEiJ_G0030900 #11	MGP_CAROLIEiJ_G0030901 #12	MGP_CAROLIEiJ_G0030902	Ap3m2 (MGP_CAROLIEiJ_G0030903) #15	Kat6a (MGP_CAROLIEiJ_G0030904) #16	MGP_CAROLIEiJ_G0030905 #17	Gpat4 (MGP_CAROLIEiJ_G0030906) #19	MGP_CAROLIEiJ_G0030907 #20	Sfrp1 (MGP_CAROLIEiJ_G0030908) #22	Zmat4 (MGP_CAROLIEiJ_G0030909) #23	MGP_CAROLIEiJ_G0030910	Tcim (MGP_CAROLIEiJ_G0030911) #24	Ido2 (MGP_CAROLIEiJ_G0030912) #25	Ido1 (MGP_CAROLIEiJ_G0030913) #26	Adam18 (MGP_CAROLIEiJ_G0030914) #27	Adam3 (MGP_CAROLIEiJ_G0030915) #28	Adam5 (MGP_CAROLIEiJ_G0030916) #29	Adam32 (MGP_CAROLIEiJ_G0030917) #30	Adam9 (MGP_CAROLIEiJ_G0030918) #31	Tm2d2 (MGP_CAROLIEiJ_G0030919) #32	Htra4 (MGP_CAROLIEiJ_G0030920) #33	Plekha2 (MGP_CAROLIEiJ_G0030921) #34	Tacc1 (MGP_CAROLIEiJ_G0030922) #35	Fgfr1 (MGP_CAROLIEiJ_G0030923) #36
Rat	MODERN SPECIES	7	Mrps31 (ENSRNOG00000011839) #7	Smim19 (ENSRNOG00000024930) #8	Slc20a2 (ENSRNOG00000019490) #9	Vdac3 (ENSRNOG00000019277) #10	Dkk4 (ENSRNOG00000019267) #11	Polb (ENSRNOG00000019150) #12	Ikbkb (ENSRNOG00000019073) #13	Plat (ENSRNOG00000019018) #14	Ap3m2 (ENSRNOG00000018650) #15	Kat6a (ENSRNOG00000025174) #16	Ank1 (ENSRNOG00000018241) #17	Nkx6-3 (ENSRNOG00000018147) #18	Gpat4 (ENSRNOG00000018077) #19	Gins4 (ENSRNOG00000018040) #20	Golga7 (ENSRNOG00000017956) #21	Sfrp1 (ENSRNOG00000017783) #22	Zmat4 (ENSRNOG00000042690) #23	Ido2 (ENSRNOG00000025365) #25	Ido1 (ENSRNOG00000031189) #26	Adam18 (ENSRNOG00000017683) #27	Adam3a (ENSRNOG00000017554) #28	Adam5 (ENSRNOG00000017518) #29	Adam32 (ENSRNOG00000025728) #30	Adam9 (ENSRNOG00000017231) #31	Tm2d2 (ENSRNOG00000016559) #32	Htra4 (ENSRNOG00000061160) #33	Plekha2 (ENSRNOG00000066109) #34	Tacc1 (ENSRNOG00000016423) #35	Rps28-ps1 (ENSRNOG00000049442)	H2az1-ps1 (ENSRNOG00000038375)	Fgfr1 (ENSRNOG00000016050) #36