Artiodactyla ANCESTRAL SPECIES 24 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.a ##9 ENSGT00950000182869.e.b.b #9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000168975 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 ENSGT00940000156991 #36 ENSGT00410000029246 Artiodactyla_a ANCESTRAL SPECIES 25 ENSGT00940000156892 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.a ##9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 ENSGT00940000156991 #36 ENSGT00410000029246 Artiodactyla_b ANCESTRAL SPECIES 6 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.a ##9 ENSGT00950000182869.e.b.b #9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 ENSGT00940000156991 #36 ENSGT00410000029246 Cetacea ANCESTRAL SPECIES 22 ENSGT00940000156892 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.b #9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 ENSGT00940000156991 #36 ENSGT00410000029246 Odontoceti ANCESTRAL SPECIES 23 ENSGT00940000156892 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.b #9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b.o ##21 ENSGT00940000159875 #22 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 ENSGT00940000156991 #36 ENSGT00410000029246 Odontoceti_a ANCESTRAL SPECIES 25 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.b #9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b.o ##21 ENSGT00390000000134.b.p.a #21 ENSGT00940000159875 #22 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 ENSGT00940000156991 #36 ENSGT00410000029246 Odontoceti_b ANCESTRAL SPECIES 23 ENSGT00940000156892 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.b #9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b.p.a #21 ENSGT00940000159875 #22 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000158064 #34 ENSGT00940000156991 #36 ENSGT00940000155860 #37 ENSGT00950000183167.a.b.b.a Monodontidae ANCESTRAL SPECIES 24 ENSGT00940000156892 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.b #9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b.p.a #21 ENSGT00940000159875 #22 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000158064 #34 ENSGT00390000004856.w.a.a.b.b.a.b.a #35 ENSGT00940000156991 #36 ENSGT00940000155860 #37 Narwhal MODERN SPECIES 303 SMIM19 (ENSMMNG00015001944) #7 SLC20A2 (ENSMMNG00015001976) #8 ENSMMNG00015002048 #9 DKK4 (ENSMMNG00015002093) #10 POLB (ENSMMNG00015002193) #11 IKBKB (ENSMMNG00015002259) #12 PLAT (ENSMMNG00015002398) #13 AP3M2 (ENSMMNG00015002450) #14 ENSMMNG00015002475 #15 ENSMMNG00015002507 #16 ANK1 (ENSMMNG00015002652) #17 NKX6-3 (ENSMMNG00015002884) #18 GPAT4 (ENSMMNG00015002891) #19 GINS4 (ENSMMNG00015002916) #20 ENSMMNG00015002939 #21 SFRP1 (ENSMMNG00015002955) #22 ZMAT4 (ENSMMNG00015002981) #23 TCIM (ENSMMNG00015003006) #24 IDO2 (ENSMMNG00015003020) #25 IDO1 (ENSMMNG00015003045) #26 ADAM18 (ENSMMNG00015003084) #27 ENSMMNG00015003183 #28 ADAM2 (ENSMMNG00015003252) #29 ENSMMNG00015003359 #30 ADAM32 (ENSMMNG00015003432) #31 ADAM9 (ENSMMNG00015003464) #32 TM2D2 (ENSMMNG00015003515) #33 PLEKHA2 (ENSMMNG00015003553) #34 ENSMMNG00015003625 #35 TACC1 (ENSMMNG00015003670) #36 FGFR1 (ENSMMNG00015003878) #37 Beluga whale DUPLICATION Beluga whale MODERN SPECIES 30 CHRNB3 (ENSDLEG00000021409) SMIM19 (ENSDLEG00000021404) #7 SLC20A2 (ENSDLEG00000021401) #8 ENSDLEG00000021398 #9 DKK4 (ENSDLEG00000021396) #10 POLB (ENSDLEG00000021389) #11 IKBKB (ENSDLEG00000021376) #12 PLAT (ENSDLEG00000021369) #13 AP3M2 (ENSDLEG00000021367) #14 KAT6A (ENSDLEG00000021358) #16 ANK1 (ENSDLEG00000007966) #17 NKX6-3 (ENSDLEG00000007337) #18 GPAT4 (ENSDLEG00000007332) #19 GINS4 (ENSDLEG00000007321) #20 ENSDLEG00000007303 #21 SFRP1 (ENSDLEG00000007298) #22 ZMAT4 (ENSDLEG00000007292) #23 TCIM (ENSDLEG00000007290) #24 IDO2 (ENSDLEG00000007277) #25 IDO1 (ENSDLEG00000007248) #26 ADAM18 (ENSDLEG00000007227) #27 ENSDLEG00000007200 #28 ADAM2 (ENSDLEG00000007085) #29 ENSDLEG00000007073 #30 ENSDLEG00000007068 #31 ADAM9 (ENSDLEG00000007048) #32 TM2D2 (ENSDLEG00000007045) #33 PLEKHA2 (ENSDLEG00000007021) #34 ENSDLEG00000007009 #35 TACC1 (ENSDLEG00000006959) #36 FGFR1 (ENSDLEG00000006950) #37 Beluga whale MODERN SPECIES 53 FGB (ENSDLEG00000014794) ENSDLEG00000014768 FGG (ENSDLEG00000014746) LRAT (ENSDLEG00000014737) RBM46 (ENSDLEG00000014695) NKX6-1 (ENSDLEG00000014670) GPAT3 (ENSDLEG00000014638) ##19 ENSDLEG00000014630 ABRAXAS1 (ENSDLEG00000014620) MRPS18C (ENSDLEG00000014529) HELQ (ENSDLEG00000014489) HPSE (ENSDLEG00000014464) ENSDLEG00000014435 ENSDLEG00000014429 ENSDLEG00000014422 ENSDLEG00000014406 #22 PLAC8 (ENSDLEG00000014395) COPS4 (ENSDLEG00000014368) LIN54 (ENSDLEG00000014184) THAP9 (ENSDLEG00000014162) ENSDLEG00000014152 SEC31A (ENSDLEG00000013553) SCD5 (ENSDLEG00000013476) TMEM150C (ENSDLEG00000013460) ENOPH1 (ENSDLEG00000013449) HNRNPDL (ENSDLEG00000013418) HNRNPD (ENSDLEG00000013324) ENSDLEG00000013314 ENSDLEG00000013303 RASGEF1B (ENSDLEG00000013280) PRKG2 (ENSDLEG00000013241) Vaquita MODERN SPECIES 13 CHRNB3 (ENSPSNG00000019107) SMIM19 (ENSPSNG00000019059) #7 SLC20A2 (ENSPSNG00000018979) #8 ENSPSNG00000018850 #9 POLB (ENSPSNG00000018721) #11 IKBKB (ENSPSNG00000018463) #12 PLAT (ENSPSNG00000018352) #13 AP3M2 (ENSPSNG00000018308) #14 ENSPSNG00000018259 #16 ENSPSNG00000018240 #16 ANK1 (ENSPSNG00000016886) #17 NKX6-3 (ENSPSNG00000016700) #18 GPAT4 (ENSPSNG00000016669) #19 GINS4 (ENSPSNG00000016625) #20 ENSPSNG00000016584 ##21 SFRP1 (ENSPSNG00000016536) #22 ZMAT4 (ENSPSNG00000016380) #23 TCIM (ENSPSNG00000016318) #24 IDO2 (ENSPSNG00000016133) #25 IDO1 (ENSPSNG00000015991) #26 ADAM18 (ENSPSNG00000015431) #27 ADAM2 (ENSPSNG00000014671) #29 ENSPSNG00000013928 #30 ADAM32 (ENSPSNG00000013750) #31 ADAM9 (ENSPSNG00000013624) #32 TM2D2 (ENSPSNG00000013491) #33 PLEKHA2 (ENSPSNG00000013373) #34 TACC1 (ENSPSNG00000021744) #36 ENSPSNG00000021721 ENSPSNG00000021703 FGFR1 (ENSPSNG00000021573) #37 Dolphin MODERN SPECIES 3223 SFRP1 (ENSTTRG00000001081) #22 Sperm whale MODERN SPECIES 12 CHRNA6 (ENSPCTG00005008927) CHRNB3 (ENSPCTG00005009052) SMIM19 (ENSPCTG00005009155) #7 SLC20A2 (ENSPCTG00005009197) #8 VDAC3 (ENSPCTG00005009269) #9 DKK4 (ENSPCTG00005009421) #10 POLB (ENSPCTG00005009483) #11 ENSPCTG00005009532 #14 ENSPCTG00005009569 #16 ENSPCTG00005009617 #16 ANK1 (ENSPCTG00005009711) #17 NKX6-3 (ENSPCTG00005011248) #18 GPAT4 (ENSPCTG00005011287) #19 GINS4 (ENSPCTG00005011324) #20 GOLGA7 (ENSPCTG00005011352) ##21 SFRP1 (ENSPCTG00005011403) #22 ZMAT4 (ENSPCTG00005011467) #23 TCIM (ENSPCTG00005011627) #24 IDO2 (ENSPCTG00005011649) #25 IDO1 (ENSPCTG00005011780) #26 ADAM18 (ENSPCTG00005011911) #27 ENSPCTG00005012369 #28 ADAM2 (ENSPCTG00005012753) #29 ENSPCTG00005013483 #30 ADAM32 (ENSPCTG00005013773) #31 ADAM9 (ENSPCTG00005014388) #32 TM2D2 (ENSPCTG00005014515) #33 PLEKHA2 (ENSPCTG00005014615) #34 TACC1 (ENSPCTG00005014739) #36 FGFR1 (ENSPCTG00005015429) #37 ENSPCTG00005016138 Blue whale MODERN SPECIES 13 ENSBMSG00010020752 SLC20A2 (ENSBMSG00010020717) #8 ENSBMSG00010020678 #9 DKK4 (ENSBMSG00010020658) #10 POLB (ENSBMSG00010020604) #11 IKBKB (ENSBMSG00010020465) #12 PLAT (ENSBMSG00010020399) #13 AP3M2 (ENSBMSG00010020358) #14 ENSBMSG00010020319 #16 ENSBMSG00010020304 #16 ANK1 (ENSBMSG00010019640) #17 NKX6-3 (ENSBMSG00010019452) #18 GPAT4 (ENSBMSG00010019416) #19 ENSBMSG00010019385 #20 GOLGA7 (ENSBMSG00010019359) #21 SFRP1 (ENSBMSG00010019335) #22 ASH2L (ENSBMSG00010019289) STAR (ENSBMSG00010019246) LSM1 (ENSBMSG00010019209) BAG4 (ENSBMSG00010019162) DDHD2 (ENSBMSG00010019120) PLPP5 (ENSBMSG00010019054) NSD3 (ENSBMSG00010018918) LETM2 (ENSBMSG00010018798) FGFR1 (ENSBMSG00010018614) #37 TACC1 (ENSBMSG00010018432) #36 ENSBMSG00010018393 ##35 PLEKHA2 (ENSBMSG00010018338) #34 TM2D2 (ENSBMSG00010018288) #33 ADAM9 (ENSBMSG00010018257) #32 ENSBMSG00010018246 Pecora ANCESTRAL SPECIES 31 ENSGT00940000156892 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.a ##9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00960000191534 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 ENSGT00940000156991 #36 Yarkand deer MODERN SPECIES 25 ENSCHYG00000026765 DKK4 (ENSCHYG00000026756) #10 ENSCHYG00000026702 ##9 ENSCHYG00000026675 IKBKB (ENSCHYG00000026569) #12 PLAT (ENSCHYG00000026485) #13 AP3M2 (ENSCHYG00000026452) #14 ENSCHYG00000026437 ENSCHYG00000026414 #16 ENSCHYG00000026404 #16 ANK1 (ENSCHYG00000025825) #17 NKX6-3 (ENSCHYG00000025744) #18 GPAT4 (ENSCHYG00000025722) #19 GINS4 (ENSCHYG00000025621) #20 GOLGA7 (ENSCHYG00000025574) #21 SFRP1 (ENSCHYG00000025546) #22 ENSCHYG00000025524 ZMAT4 (ENSCHYG00000025481) #23 TCIM (ENSCHYG00000025468) #24 IDO2 (ENSCHYG00000025384) #25 IDO1 (ENSCHYG00000025341) #26 ENSCHYG00000025331 ADAM18 (ENSCHYG00000025144) #27 ENSCHYG00000025030 #28 ADAM2 (ENSCHYG00000024967) #29 ENSCHYG00000024870 #30 ENSCHYG00000024847 ADAM32 (ENSCHYG00000024624) #31 ADAM9 (ENSCHYG00000024538) #32 TM2D2 (ENSCHYG00000024462) #33 HTRA4 (ENSCHYG00000024394) Percora_a ANCESTRAL SPECIES 31 ENSGT00940000156892 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.a ##9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00960000191534 ENSGT00960000191014 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 Bovidae ANCESTRAL SPECIES 30 ENSGT00940000156892 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.a ##9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00960000191534 ENSGT00960000191014 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 Caprinae ANCESTRAL SPECIES 31 ENSGT00940000158062 ENSGT00940000156892 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.a ##9 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466.h #28 ENSGT00940000162466.g.a #28 ENSGT00940000161961 #29 ENSGT00390000013989.a.`b.a ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 ENSGT00940000156991 #36 Rambouillet Sheep MODERN SPECIES 18 CHRNA6 (ENSOARG00020025686) CHRNB3 (ENSOARG00020025678) SMIM19 (ENSOARG00020025670) #7 SLC20A2 (ENSOARG00020025665) #8 VDAC3 (ENSOARG00020025662) ##9 POLB (ENSOARG00020025652) #11 IKBKB (ENSOARG00020025633) #12 PLAT (ENSOARG00020025622) #13 AP3M2 (ENSOARG00020025613) #14 KAT6A (ENSOARG00020025591) #16 ANK1 (ENSOARG00020024995) #17 NKX6-3 (ENSOARG00020024881) #18 GPAT4 (ENSOARG00020024847) #19 GINS4 (ENSOARG00020024828) #20 GOLGA7 (ENSOARG00020024819) #21 SFRP1 (ENSOARG00020024807) #22 ZMAT4 (ENSOARG00020024771) #23 TCIM (ENSOARG00020024760) #24 IDO2 (ENSOARG00020024709) #25 IDO1 (ENSOARG00020024595) #26 ADAM18 (ENSOARG00020024437) #27 ENSOARG00020024173 #28 ENSOARG00020024155 ENSOARG00020023902 #28 ENSOARG00020023570 #28 ADAM2 (ENSOARG00020023092) #29 ENSOARG00020023037 ADAM32 (ENSOARG00020022569) #31 ENSOARG00020022534 ADAM9 (ENSOARG00020022343) #32 TM2D2 (ENSOARG00020022306) #33 Goat MODERN SPECIES 19 SMIM19 (ENSCHIG00000010434) #7 SLC20A2 (ENSCHIG00000023382) #8 VDAC3 (ENSCHIG00000020881) ##9 POLB (ENSCHIG00000002303) #11 ENSCHIG00000018571 IKBKB (ENSCHIG00000014206) #12 ENSCHIG00000000115 PLAT (ENSCHIG00000000147) #13 AP3M2 (ENSCHIG00000000394) #14 KAT6A (ENSCHIG00000000530) #16 ANK1 (ENSCHIG00000007347) #17 NKX6-3 (ENSCHIG00000003467) #18 GPAT4 (ENSCHIG00000021145) #19 GINS4 (ENSCHIG00000016339) #20 GOLGA7 (ENSCHIG00000000610) #21 SFRP1 (ENSCHIG00000014291) #22 ENSCHIG00000016476 ZMAT4 (ENSCHIG00000022017) #23 TCIM (ENSCHIG00000004678) #24 IDO2 (ENSCHIG00000025203) #25 IDO1 (ENSCHIG00000019906) #26 ADAM18 (ENSCHIG00000014976) #27 ENSCHIG00000017832 #28 ENSCHIG00000021808 #28 ADAM2 (ENSCHIG00000009840) #29 ENSCHIG00000021726 ADAM32 (ENSCHIG00000001217) #31 ENSCHIG00000016773 ADAM9 (ENSCHIG00000019633) #32 TM2D2 (ENSCHIG00000022268) #33 HTRA4 (ENSCHIG00000014811) Bovinae ANCESTRAL SPECIES 36 ENSGT00940000156892 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.a ##9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00960000191534 ENSGT00960000191014 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 Bos ANCESTRAL SPECIES 33 ENSGT00390000000436 #7 ENSGT00390000014879.c.b.n #8 ENSGT00950000182869.e.b.b.db.a #9 ENSGT00950000182869.e.b.a ##9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00960000191534 ENSGT00960000191014 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 Bos_b ANCESTRAL SPECIES 35 ENSGT00940000156892 ENSGT00390000000436 #7 ENSGT00390000014879.c.b.n #8 ENSGT00950000182869.e.b.a ##9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00960000191014 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT01100000263480.a.b.b.a.b.b.b.b.a.b.b.b.a ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 Hybrid Bos Indicus MODERN SPECIES 19 ENSBIXG00005004905 #7 SLC20A2 (ENSBIXG00005004922) #8 ENSBIXG00005028614 #9 DKK4 (ENSBIXG00005002403) #10 ENSBIXG00005028701 #11 IKBKB (ENSBIXG00005005046) #12 PLAT (ENSBIXG00005002068) #13 AP3M2 (ENSBIXG00005029047) #14 ENSBIXG00005002004 KAT6A (ENSBIXG00005001946) #16 ANK1 (ENSBIXG00005007939) #17 NKX6-3 (ENSBIXG00005007981) #18 GPAT4 (ENSBIXG00005008002) #19 GINS4 (ENSBIXG00005008027) #20 GOLGA7 (ENSBIXG00005008055) #21 SFRP1 (ENSBIXG00005008069) #22 ZMAT4 (ENSBIXG00005008092) #23 ENSBIXG00005008127 IDO2 (ENSBIXG00005008139) #25 IDO1 (ENSBIXG00005008156) #26 ADAM18 (ENSBIXG00005008268) #27 ENSBIXG00005008334 #28 ADAM2 (ENSBIXG00005008443) #29 ENSBIXG00005000215 #30 ADAM32 (ENSBIXG00005008580) #31 ENSBIXG00005008591 ADAM9 (ENSBIXG00005008621) #32 TM2D2 (ENSBIXG00005008632) #33 HTRA4 (ENSBIXG00005008659) PLEKHA2 (ENSBIXG00005008709) #34 ENSBIXG00005008728 Cow MODERN SPECIES 19 VDAC3 (ENSBTAG00000014068) ##9 DKK4 (ENSBTAG00000000226) #10 POLB (ENSBTAG00000000225) #11 IKBKB (ENSBTAG00000007599) #12 PLAT (ENSBTAG00000001244) #13 AP3M2 (ENSBTAG00000001243) #14 KAT6A (ENSBTAG00000004015) #16 ENSBTAG00000052888 ENSBTAG00000003275 #17 ENSBTAG00000054394 #17 ENSBTAG00000027629 #17 NKX6-3 (ENSBTAG00000018495) #18 GPAT4 (ENSBTAG00000005730) #19 GINS4 (ENSBTAG00000017133) #20 GOLGA7 (ENSBTAG00000027626) #21 SFRP1 (ENSBTAG00000027625) #22 ENSBTAG00000051188 ZMAT4 (ENSBTAG00000017420) #23 TCIM (ENSBTAG00000033304) #24 IDO2 (ENSBTAG00000005725) #25 IDO1 (ENSBTAG00000020602) #26 ADAM18 (ENSBTAG00000004830) #27 ADAM3A (ENSBTAG00000033312) #28 ADAM2 (ENSBTAG00000009408) #29 ENSBTAG00000040445 #30 ADAM32 (ENSBTAG00000023146) #31 ENSBTAG00000048547 ADAM9 (ENSBTAG00000017455) #32 TM2D2 (ENSBTAG00000003516) #33 HTRA4 (ENSBTAG00000019532) PLEKHA2 (ENSBTAG00000003509) #34 Bos_a ANCESTRAL SPECIES 31 ENSGT00390000014879.c.b.n #8 ENSGT00950000182869.e.b.b.db.a #9 ENSGT00390000014879.c.b.m #8 ENSGT00950000182869.e.b.a ##9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00960000191534 ENSGT00960000191014 ENSGT00940000156888 #23 ENSGT00390000002226.e.b ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b Domestic yak MODERN SPECIES 20 SLC20A2 (ENSBGRG00000015933) #8 ENSBGRG00000016098 ENSBGRG00000007025 #9 DKK4 (ENSBGRG00000007257) #10 POLB (ENSBGRG00000007383) #11 IKBKB (ENSBGRG00000008023) #12 PLAT (ENSBGRG00000008639) #13 AP3M2 (ENSBGRG00000008906) #14 KAT6A (ENSBGRG00000009022) #16 ENSBGRG00000009141 ANK1 (ENSBGRG00000009277) #17 GPAT4 (ENSBGRG00000010926) #19 NKX6-3 (ENSBGRG00000011190) #18 GINS4 (ENSBGRG00000011269) #20 GOLGA7 (ENSBGRG00000011361) #21 SFRP1 (ENSBGRG00000011484) #22 ZMAT4 (ENSBGRG00000011635) #23 ENSBGRG00000011884 TCIM (ENSBGRG00000011938) #24 IDO2 (ENSBGRG00000011955) #25 IDO1 (ENSBGRG00000012224) #26 ADAM18 (ENSBGRG00000012415) #27 ENSBGRG00000013020 #28 ADAM2 (ENSBGRG00000013291) #29 ENSBGRG00000013979 #30 ADAM32 (ENSBGRG00000014213) #31 ADAM9 (ENSBGRG00000014503) #32 TM2D2 (ENSBGRG00000014912) #33 HTRA4 (ENSBGRG00000014990) PLEKHA2 (ENSBGRG00000015187) #34 TACC1 (ENSBGRG00000015345) #36 Wild yak MODERN SPECIES 1135 GOLGA7 (ENSBMUG00000020666) #21 SFRP1 (ENSBMUG00000020645) #22 ENSBMUG00000020634 ENSBMUG00000020631 ZMAT4 (ENSBMUG00000020613) #23 American bison MODERN SPECIES 3153 SMIM19 (ENSBBBG00000012190) #7 SLC20A2 (ENSBBBG00000012210) #8 VDAC3 (ENSBBBG00000002302) ##9 DKK4 (ENSBBBG00000012236) #10 POLB (ENSBBBG00000012253) #11 IKBKB (ENSBBBG00000001923) #12 PLAT (ENSBBBG00000002352) #13 AP3M2 (ENSBBBG00000012414) #14 ENSBBBG00000012430 #16 ENSBBBG00000012435 #16 ANK1 (ENSBBBG00000012695) #17 NKX6-3 (ENSBBBG00000012724) #18 GPAT4 (ENSBBBG00000001809) #19 GINS4 (ENSBBBG00000012743) #20 GOLGA7 (ENSBBBG00000012747) #21 SFRP1 (ENSBBBG00000012753) #22 ENSBBBG00000001800 ENSBBBG00000012756 ZMAT4 (ENSBBBG00000002470) #23 TCIM (ENSBBBG00000008443) #24 IDO2 (ENSBBBG00000012795) #25 IDO1 (ENSBBBG00000002483) #26 ADAM18 (ENSBBBG00000002494) #27 ENSBBBG00000012838 #28 ADAM2 (ENSBBBG00000001750) #29 ENSBBBG00000002527 #30 Siberian musk deer MODERN SPECIES 142 CHRNB3 (ENSMMSG00000007298) SMIM19 (ENSMMSG00000007267) #7 SLC20A2 (ENSMMSG00000007238) #8 VDAC3 (ENSMMSG00000007208) ##9 DKK4 (ENSMMSG00000007175) #10 POLB (ENSMMSG00000007122) #11 IKBKB (ENSMMSG00000006959) #12 PLAT (ENSMMSG00000006692) #13 AP3M2 (ENSMMSG00000006631) #14 KAT6A (ENSMMSG00000006547) #16 ANK1 (ENSMMSG00000005828) #17 NKX6-3 (ENSMMSG00000005713) #18 GPAT4 (ENSMMSG00000005635) #19 GINS4 (ENSMMSG00000005569) #20 GOLGA7 (ENSMMSG00000005524) #21 SFRP1 (ENSMMSG00000005490) #22 ENSMMSG00000005471 ZMAT4 (ENSMMSG00000005344) #23 TCIM (ENSMMSG00000005322) #24 IDO2 (ENSMMSG00000005235) #25 IDO1 (ENSMMSG00000005169) #26 ADAM18 (ENSMMSG00000004800) #27 ENSMMSG00000004695 #28 ADAM2 (ENSMMSG00000004623) #29 ADAM32 (ENSMMSG00000004459) #31 ADAM9 (ENSMMSG00000004387) #32 TM2D2 (ENSMMSG00000004367) #33 HTRA4 (ENSMMSG00000004356) PLEKHA2 (ENSMMSG00000004313) #34 TACC1 (ENSMMSG00000004195) #36 ENSMMSG00000004179 Camelidae ANCESTRAL SPECIES 35 ENSGT00940000156892 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.a ##9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466 #28 ENSGT00940000161961 #29 ENSGT00940000162784 #30 ENSGT00940000161015 #31 ENSGT00940000156239 #32 ENSGT00730000111181 #33 ENSGT00940000160760.b ENSGT00940000158064 #34 ENSGT00940000156991 #36 ENSGT00940000155860 #37 Arabian camel MODERN SPECIES 18 SMIM19 (ENSCDRG00005019508) #7 SLC20A2 (ENSCDRG00005019519) #8 VDAC3 (ENSCDRG00005019529) ##9 DKK4 (ENSCDRG00005019544) #10 POLB (ENSCDRG00005019560) #11 IKBKB (ENSCDRG00005019600) #12 PLAT (ENSCDRG00005019705) #13 AP3M2 (ENSCDRG00005019785) #14 ENSCDRG00005019843 #16 ENSCDRG00005019862 #16 ANK1 (ENSCDRG00005019941) #17 NKX6-3 (ENSCDRG00005020343) #18 GPAT4 (ENSCDRG00005020350) #19 GINS4 (ENSCDRG00005020358) #20 GOLGA7 (ENSCDRG00005020376) #21 SFRP1 (ENSCDRG00005008913) #22 ZMAT4 (ENSCDRG00005009014) #23 TCIM (ENSCDRG00005009164) #24 IDO2 (ENSCDRG00005009189) #25 IDO1 (ENSCDRG00005009435) #26 ADAM18 (ENSCDRG00005009541) #27 ENSCDRG00005010222 #28 ADAM2 (ENSCDRG00005010441) #29 ENSCDRG00005010581 #30 ADAM9 (ENSCDRG00005011143) #32 TM2D2 (ENSCDRG00005011206) #33 ENSCDRG00005011288 PLEKHA2 (ENSCDRG00005011341) #34 TACC1 (ENSCDRG00005011845) #36 ENSCDRG00005013185 FGFR1 (ENSCDRG00005013254) #37 Suina ANCESTRAL SPECIES 52 ENSGT00390000000436 #7 ENSGT00390000014879.c.b #8 ENSGT00950000182869.e.b.b #9 ENSGT00940000161614 #10 ENSGT00940000156918 #11 ENSGT00950000182937.A.b #12 ENSGT00940000158930.d #13 ENSGT00940000157991 #14 ENSGT00940000156962 #16 ENSGT00940000155760 #17 ENSGT00940000168975 ENSGT00940000160545 #18 ENSGT01030000234574.B.c.b.b #19 ENSGT00390000003246 #20 ENSGT00390000000134.b #21 ENSGT00940000159875 #22 ENSGT00940000156888 #23 ENSGT00390000003458 #24 ENSGT00940000161813 #25 ENSGT00940000161410 #26 ENSGT00940000162281 #27 ENSGT00940000162466.f #28 ENSGT00940000158569 ENSGT00940000160321.d ENSGT00940000157733 ENSGT00940000163257 ENSGT00940000162029 ENSGT00940000154582 ENSGT00390000004552.c.b ENSGT00530000063548.B ENSGT00390000006641 Chacoan peccary MODERN SPECIES 781 CHRNB3 (ENSCWAG00000010206) SMIM19 (ENSCWAG00000010270) #7 SLC20A2 (ENSCWAG00000010306) #8 ENSCWAG00000010355 #9 DKK4 (ENSCWAG00000010429) #10 POLB (ENSCWAG00000010465) #11 IKBKB (ENSCWAG00000010536) #12 PLAT (ENSCWAG00000010791) #13 AP3M2 (ENSCWAG00000010826) #14 KAT6A (ENSCWAG00000010879) #16 ANK1 (ENSCWAG00000011039) #17 NKX6-3 (ENSCWAG00000012653) #18 GPAT4 (ENSCWAG00000012694) #19 GINS4 (ENSCWAG00000012781) #20 GOLGA7 (ENSCWAG00000012944) #21 SFRP1 (ENSCWAG00000012985) #22 ZMAT4 (ENSCWAG00000013045) #23 TCIM (ENSCWAG00000013167) #24 IDO2 (ENSCWAG00000013189) #25 IDO1 (ENSCWAG00000013369) #26 ADAM18 (ENSCWAG00000013491) #27 ENSCWAG00000013554 #28 F11 (ENSCWAG00000013723) MTNR1A (ENSCWAG00000013924) FAT1 (ENSCWAG00000013974) TRIML1 (ENSCWAG00000014167) TRIML2 (ENSCWAG00000014233) ENSCWAG00000014306 FRG1 (ENSCWAG00000014338) ASAH1 (ENSCWAG00000014399) PCM1 (ENSCWAG00000014664) Pig MODERN SPECIES 8 SLC20A2 (ENSSSCG00000007027) #8 ENSSSCG00000007026 #9 DKK4 (ENSSSCG00000007029) #10 POLB (ENSSSCG00000007031) #11 IKBKB (ENSSSCG00000007030) #12 PLAT (ENSSSCG00000007032) #13 AP3M2 (ENSSSCG00000007033) #14 ENSSSCG00000007023 #16 ENSSSCG00000059771 #16 ANK1 (ENSSSCG00000007022) #17 ENSSSCG00000031608 NKX6-3 (ENSSSCG00000033505) #18 GPAT4 (ENSSSCG00000007019) #19 GINS4 (ENSSSCG00000037513) #20 GOLGA7 (ENSSSCG00000020715) #21 SFRP1 (ENSSSCG00000025822) #22 ZMAT4 (ENSSSCG00000007010) #23 ENSSSCG00000062725 TCIM (ENSSSCG00000032320) #24 IDO2 (ENSSSCG00000023054) #25 IDO1 (ENSSSCG00000007007) #26 ADAM18 (ENSSSCG00000007008) #27 ADAM3A (ENSSSCG00000007009) #28 F11 (ENSSSCG00000032653) ENSSSCG00000021473 ENSSSCG00000007005 ENSSSCG00000041367 ENSSSCG00000007003 MTNR1A (ENSSSCG00000007002) ENSSSCG00000061279 TRIML2 (ENSSSCG00000006997)