Gnathostomata ANCESTRAL SPECIES 556 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000161782 ENSGT00940000160103 ENSGT00940000154383 Euteleostomi ANCESTRAL SPECIES 340 ENSGT01070000253744.a.a.b.a ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000158302.d.b ENSGT00940000161782 ENSGT00940000160103 ENSGT00940000154383 Sarcopterygii ANCESTRAL SPECIES 340 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000161782 ENSGT00940000155722 ENSGT01070000253744.a.a.b.a ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 Tetrapoda ANCESTRAL SPECIES 60 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000161782 ENSGT00940000155722 ENSGT01070000253744.a.a.b.a ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00390000003465.b.a Amniota ANCESTRAL SPECIES 39 ENSGT00940000158303 ENSGT01050000244950.a.b ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT01070000253744.a.a.b.a ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768 ENSGT00940000166312.b.a ENSGT00940000164318 ENSGT00390000017672 ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00980000199132 ENSGT00390000009435 ENSGT00940000159513 Mammalia ANCESTRAL SPECIES 19 ENSGT00500000044870.b ENSGT00940000158303 ENSGT01050000244950.a.b ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT01070000253744.a.a.b.a ENSGT00940000160023 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768 ENSGT00940000166312.b.a ENSGT00940000164318 ENSGT00390000017672 ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00980000199132 ENSGT00390000009435 ENSGT00940000159513 Theria ANCESTRAL SPECIES 36 ENSGT00500000044870.b ENSGT00940000158303 ENSGT01050000244950.a.b ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT01070000253744.a.a.b.a ENSGT00940000160023 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00940000178962 #36 ENSGT00390000015214 #37 ENSGT00940000178388 ENSGT00390000015159.a.a ENSGT00940000161166 ENSGT00390000017767.b.b Eutheria ANCESTRAL SPECIES ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00940000178962 #36 ENSGT00390000015214 #37 Boreoeutheria ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00940000178962 #36 ENSGT00390000015214 #37 Laurasiatheria ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00940000178962 #36 ENSGT00390000015214 #37 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00940000178962 #36 ENSGT00390000015214 #37 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00940000178962 #36 ENSGT00390000015214 #37 Carnivora ANCESTRAL SPECIES 1 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00940000178962 #36 ENSGT00390000015214 #37 Caniformia ANCESTRAL SPECIES 2 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00940000178962 #36 ENSGT00390000015214 #37 Caniformia_b ANCESTRAL SPECIES 1 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272 Mustelinae ANCESTRAL SPECIES ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272 American mink MODERN SPECIES 99 ENSNVIG00000016219 FOXJ3 (ENSNVIG00000016128) #10 GUCA2A (ENSNVIG00000016111) #11 GUCA2B (ENSNVIG00000016106) #12 ENSNVIG00000016104 ENSNVIG00000016094 HIVEP3 (ENSNVIG00000016059) #13 EDN2 (ENSNVIG00000016045) #14 ENSNVIG00000016035 #15 SCMH1 (ENSNVIG00000015879) #16 SLFNL1 (ENSNVIG00000015849) #17 PYRG1 (ENSNVIG00000015737) #18 CITED4 (ENSNVIG00000015724) #19 KCNQ4 (ENSNVIG00000015699) #20 NFYC (ENSNVIG00000015556) #21 RIMS3 (ENSNVIG00000015532) #22 ZNF684 (ENSNVIG00000015518) #23 EXO5 (ENSNVIG00000015513) #24 ZFP69 (ENSNVIG00000015479) #25 ZFP69B (ENSNVIG00000015457) #26 SMAP2 (ENSNVIG00000015398) #27 COL9A2 (ENSNVIG00000015312) #28 ZMPSTE24 (ENSNVIG00000015278) #29 TMCO2 (ENSNVIG00000015270) #30 RLF (ENSNVIG00000015255) #31 PPT1 (ENSNVIG00000015174) #32 CAP1 (ENSNVIG00000015095) #33 MFSD2A (ENSNVIG00000014997) #34 MYCL (ENSNVIG00000014970) #35 TRIT1 (ENSNVIG00000014833) #37 ENSNVIG00000014799 Ferret MODERN SPECIES 167 ZMYND12 (ENSMPUG00000014038) #8 RIMKLA (ENSMPUG00000014040) #9 FOXJ3 (ENSMPUG00000014045) #10 GUCA2A (ENSMPUG00000014052) #11 GUCA2B (ENSMPUG00000014055) #12 HIVEP3 (ENSMPUG00000014066) #13 ENSMPUG00000014071 EDN2 (ENSMPUG00000014076) #14 FOXO6 (ENSMPUG00000014082) #15 SCMH1 (ENSMPUG00000014085) #16 SLFNL1 (ENSMPUG00000014091) #17 CTPS1 (ENSMPUG00000014098) #18 ENSMPUG00000014104 KCNQ4 (ENSMPUG00000014105) #20 NFYC (ENSMPUG00000014111) #21 RIMS3 (ENSMPUG00000014121) #22 EXO5 (ENSMPUG00000014127) #24 ZFP69 (ENSMPUG00000014134) #25 ZFP69B (ENSMPUG00000014137) #26 SMAP2 (ENSMPUG00000014143) #27 COL9A2 (ENSMPUG00000014148) #28 ZMPSTE24 (ENSMPUG00000014262) #29 RLF (ENSMPUG00000014267) #31 PPT1 (ENSMPUG00000014273) #32 CAP1 (ENSMPUG00000014278) #33 MFSD2A (ENSMPUG00000014281) #34 MYCL (ENSMPUG00000014286) #35 TRIT1 (ENSMPUG00000014291) #37 ENSMPUG00000014337 PPIE (ENSMPUG00000014345) HPCAL4 (ENSMPUG00000014377) Ursidae ANCESTRAL SPECIES ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00390000014814.a.b.a.b.a.b ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000017955.c.n #33 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790.j #32 ENSGT00390000017955.c.m #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272 Giant Panda MODERN SPECIES 11 PPCS (ENSAMEG00000000554) #7 ZMYND12 (ENSAMEG00000000560) #8 RIMKLA (ENSAMEG00000030543) #9 ENSAMEG00000025996 FOXJ3 (ENSAMEG00000000591) #10 GUCA2A (ENSAMEG00000000614) #11 GUCA2B (ENSAMEG00000026602) #12 HIVEP3 (ENSAMEG00000029105) #13 EDN2 (ENSAMEG00000000522) #14 FOXO6 (ENSAMEG00000028105) #15 SLFNL1 (ENSAMEG00000011863) #17 SCMH1 (ENSAMEG00000011860) #16 CTPS1 (ENSAMEG00000011866) #18 KCNQ4 (ENSAMEG00000011888) #20 NFYC (ENSAMEG00000011899) #21 RIMS3 (ENSAMEG00000011913) #22 ENSAMEG00000026970 ZNF684 (ENSAMEG00000028572) #23 ENSAMEG00000024599 #33 ZFP69 (ENSAMEG00000031429) #25 SMAP2 (ENSAMEG00000004571) #27 COL9A2 (ENSAMEG00000004524) #28 ZMPSTE24 (ENSAMEG00000004501) #29 TMCO2 (ENSAMEG00000004499) #30 RLF (ENSAMEG00000004478) #31 PPT1 (ENSAMEG00000004444) #32 ENSAMEG00000004417 #33 MFSD2A (ENSAMEG00000004371) #34 MYCL (ENSAMEG00000023600) #35 TRIT1 (ENSAMEG00000004342) #37 ENSAMEG00000011490 Ursus ANCESTRAL SPECIES 19 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00390000014814.a.b.a.b.a.b.hb ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 American black bear MODERN SPECIES 2483 KCNQ4 (ENSUAMG00000004706) #20 NFYC (ENSUAMG00000004728) #21 RIMS3 (ENSUAMG00000004735) #22 Polar bear MODERN SPECIES 218 ENSUMAG00000024381 CCDC30 (ENSUMAG00000024382) ENSUMAG00000024383 #7 ZMYND12 (ENSUMAG00000024384) #8 RIMKLA (ENSUMAG00000024385) #9 ENSUMAG00000024386 FOXJ3 (ENSUMAG00000024387) #10 GUCA2A (ENSUMAG00000024388) #11 GUCA2B (ENSUMAG00000024389) #12 HIVEP3 (ENSUMAG00000024393) #13 ENSUMAG00000024394 #14 SCMH1 (ENSUMAG00000000166) #16 CTPS1 (ENSUMAG00000000243) #18 ENSUMAG00000000978 NFYC (ENSUMAG00000000987) #21 RIMS3 (ENSUMAG00000001019) #22 Canidae ANCESTRAL SPECIES 12 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000003156.a.b.q.b ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT01030000236049.a ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.o.a #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 Red fox MODERN SPECIES 183 CCDC30 (ENSVVUG00000001835) PPCS (ENSVVUG00000001916) #7 ZMYND12 (ENSVVUG00000001924) #8 RIMKLA (ENSVVUG00000001955) #9 FOXJ3 (ENSVVUG00000001974) #10 GUCA2A (ENSVVUG00000002000) #11 GUCA2B (ENSVVUG00000002020) #12 HIVEP3 (ENSVVUG00000002055) #13 EDN2 (ENSVVUG00000002072) #14 ENSVVUG00000002106 #15 SCMH1 (ENSVVUG00000002129) #16 SLFNL1 (ENSVVUG00000002164) #17 CTPS1 (ENSVVUG00000002380) #18 KCNQ4 (ENSVVUG00000005030) #20 NFYC (ENSVVUG00000005043) #21 RIMS3 (ENSVVUG00000005066) #22 ENSVVUG00000005079 ZNF684 (ENSVVUG00000005082) #23 EXO5 (ENSVVUG00000005087) #24 ENSVVUG00000005091 ZFP69 (ENSVVUG00000005095) #25 ZFP69B (ENSVVUG00000005101) #26 SMAP2 (ENSVVUG00000005115) #27 ENSVVUG00000005124 #28 ZMPSTE24 (ENSVVUG00000005159) #29 TMCO2 (ENSVVUG00000005166) #30 RLF (ENSVVUG00000005167) #31 PPT1 (ENSVVUG00000005177) #32 CAP1 (ENSVVUG00000005182) #33 MFSD2A (ENSVVUG00000005183) #34 MYCL (ENSVVUG00000005189) #35 Canis_lupus ANCESTRAL SPECIES 16 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000003156.a.b.q.b ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT01030000236049.a ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.o.a #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Dingo MODERN SPECIES 344 ENSCAFG00020002961 #8 RIMKLA (ENSCAFG00020002966) #9 ENSCAFG00020002970 #10 ENSCAFG00020002985 #10 GUCA2A (ENSCAFG00020002988) #11 GUCA2B (ENSCAFG00020002992) #12 HIVEP3 (ENSCAFG00020003007) #13 ENSCAFG00020003014 #14 FOXO6 (ENSCAFG00020003018) #15 SCMH1 (ENSCAFG00020003027) #16 SLFNL1 (ENSCAFG00020003039) #17 CTPS1 (ENSCAFG00020003062) #18 CITED4 (ENSCAFG00020003351) #19 KCNQ4 (ENSCAFG00020003354) #20 NFYC (ENSCAFG00020003362) #21 RIMS3 (ENSCAFG00020003384) #22 ENSCAFG00020003387 ZNF684 (ENSCAFG00020003394) #23 EXO5 (ENSCAFG00020003399) #24 ENSCAFG00020003403 ZFP69B (ENSCAFG00020003410) #26 SMAP2 (ENSCAFG00020003411) #27 COL9A2 (ENSCAFG00020003418) #28 ZMPSTE24 (ENSCAFG00020003431) #29 TMCO2 (ENSCAFG00020003438) #30 RLF (ENSCAFG00020003446) #31 PPT1 (ENSCAFG00020003461) #32 ENSCAFG00020003484 #33 MFSD2A (ENSCAFG00020003855) #34 MYCL (ENSCAFG00020003867) #35 TRIT1 (ENSCAFG00020003875) #37 Dog MODERN SPECIES 6 ENSCAFG00845017232 #9 FOXJ3 (ENSCAFG00845017313) #10 GUCA2A (ENSCAFG00845017500) #11 GUCA2B (ENSCAFG00845008466) #12 ENSCAFG00845008507 ENSCAFG00845008525 HIVEP3 (ENSCAFG00845008551) #13 EDN2 (ENSCAFG00845008596) #14 FOXO6 (ENSCAFG00845008667) #15 SCMH1 (ENSCAFG00845008728) #16 SLFNL1 (ENSCAFG00845008900) #17 CTPS1 (ENSCAFG00845008931) #18 CITED4 (ENSCAFG00845009051) #19 KCNQ4 (ENSCAFG00845009123) #20 NFYC (ENSCAFG00845009374) #21 RIMS3 (ENSCAFG00845009552) #22 ENSCAFG00845009641 ZNF684 (ENSCAFG00845009658) #23 EXO5 (ENSCAFG00845009682) #24 ENSCAFG00845009699 ZFP69B (ENSCAFG00845009753) #26 SMAP2 (ENSCAFG00845009938) #27 COL9A2 (ENSCAFG00845010158) #28 ZMPSTE24 (ENSCAFG00845010326) #29 TMCO2 (ENSCAFG00845010398) #30 RLF (ENSCAFG00845010433) #31 PPT1 (ENSCAFG00845010701) #32 CAP1 (ENSCAFG00845010977) #33 MYCL (ENSCAFG00845011043) #35 MFSD2A (ENSCAFG00845011113) #34 TRIT1 (ENSCAFG00845011261) #37 Felidae ANCESTRAL SPECIES 10 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.k #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272 Panthera ANCESTRAL SPECIES 4 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.k #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000158790 Panthera_a ANCESTRAL SPECIES 11 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.k #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 leopard MODERN SPECIES 122 ZMYND12 (ENSPPRG00000023490) #8 RIMKLA (ENSPPRG00000023129) #9 FOXJ3 (ENSPPRG00000002362) #10 GUCA2A (ENSPPRG00000002704) #11 GUCA2B (ENSPPRG00000003097) #12 HIVEP3 (ENSPPRG00000003849) #13 EDN2 (ENSPPRG00000003973) #14 FOXO6 (ENSPPRG00000004188) #15 SCMH1 (ENSPPRG00000011138) #16 SLFNL1 (ENSPPRG00000012794) #17 CTPS1 (ENSPPRG00000014834) #18 ENSPPRG00000020429 CITED4 (ENSPPRG00000020442) #19 KCNQ4 (ENSPPRG00000017625) #20 NFYC (ENSPPRG00000024994) #21 RIMS3 (ENSPPRG00000024970) #22 ZNF684 (ENSPPRG00000024912) #23 EXO5 (ENSPPRG00000020696) #24 ZFP69 (ENSPPRG00000024684) #25 ZFP69B (ENSPPRG00000024607) #26 SMAP2 (ENSPPRG00000024039) #27 COL9A2 (ENSPPRG00000023328) #28 ZMPSTE24 (ENSPPRG00000022765) #29 TMCO2 (ENSPPRG00000022670) #30 RLF (ENSPPRG00000000135) #31 PPT1 (ENSPPRG00000001088) #32 CAP1 (ENSPPRG00000001756) #33 MFSD2A (ENSPPRG00000005280) #34 MYCL (ENSPPRG00000006062) #35 TRIT1 (ENSPPRG00000009680) #37 lion MODERN SPECIES 80 NFYC (ENSPLOG00000018570) #21 RIMS3 (ENSPLOG00000018675) #22 ZNF684 (ENSPLOG00000018742) #23 EXO5 (ENSPLOG00000018778) #24 ZFP69 (ENSPLOG00000018790) #25 ZFP69B (ENSPLOG00000018823) #26 SMAP2 (ENSPLOG00000018892) #27 COL9A2 (ENSPLOG00000018979) #28 ZMPSTE24 (ENSPLOG00000019179) #29 TMCO2 (ENSPLOG00000019262) #30 RLF (ENSPLOG00000019302) #31 PPT1 (ENSPLOG00000019360) #32 ENSPLOG00000019462 #33 MFSD2A (ENSPLOG00000019565) #34 MYCL (ENSPLOG00000019715) #35 TRIT1 (ENSPLOG00000019799) #37 Tiger MODERN SPECIES 100 ENSPTIG00000011889 CCDC30 (ENSPTIG00000012162) ENSPTIG00000012890 #7 ZMYND12 (ENSPTIG00000013136) #8 RIMKLA (ENSPTIG00000013319) #9 FOXJ3 (ENSPTIG00000013449) #10 GUCA2A (ENSPTIG00000013553) #11 GUCA2B (ENSPTIG00000013678) #12 HIVEP3 (ENSPTIG00000014261) #13 EDN2 (ENSPTIG00000014556) #14 SCMH1 (ENSPTIG00000014755) #16 ENSPTIG00000016960 #17 CTPS1 (ENSPTIG00000017227) #18 KCNQ4 (ENSPTIG00000017705) #20 NFYC (ENSPTIG00000018001) #21 RIMS3 (ENSPTIG00000018430) #22 ZNF684 (ENSPTIG00000018626) #23 EXO5 (ENSPTIG00000006394) #24 ZFP69 (ENSPTIG00000019037) #25 ZFP69B (ENSPTIG00000019160) #26 SMAP2 (ENSPTIG00000019202) #27 COL9A2 (ENSPTIG00000019688) #28 ZMPSTE24 (ENSPTIG00000019825) #29 TMCO2 (ENSPTIG00000019965) #30 RLF (ENSPTIG00000019984) #31 PPT1 (ENSPTIG00000020102) #32 ENSPTIG00000020510 #33 MFSD2A (ENSPTIG00000020789) #34 MYCL (ENSPTIG00000021086) #35 TRIT1 (ENSPTIG00000021134) #37 PPIE (ENSPTIG00000003196) Cat MODERN SPECIES 239 ZMYND12 (ENSFCAG00000012835) #8 RIMKLA (ENSFCAG00000043810) #9 FOXJ3 (ENSFCAG00000026568) #10 GUCA2A (ENSFCAG00000006183) #11 GUCA2B (ENSFCAG00000006182) #12 ENSFCAG00000048899 HIVEP3 (ENSFCAG00000014035) #13 EDN2 (ENSFCAG00000014032) #14 FOXO6 (ENSFCAG00000042868) #15 SCMH1 (ENSFCAG00000015324) #16 SLFNL1 (ENSFCAG00000015323) #17 CTPS1 (ENSFCAG00000002423) #18 CITED4 (ENSFCAG00000045290) #19 KCNQ4 (ENSFCAG00000002917) #20 NFYC (ENSFCAG00000002915) #21 RIMS3 (ENSFCAG00000002913) #22 ZNF684 (ENSFCAG00000028520) #23 EXO5 (ENSFCAG00000005729) #24 ZFP69 (ENSFCAG00000033023) #25 ZFP69B (ENSFCAG00000034968) #26 SMAP2 (ENSFCAG00000005726) #27 COL9A2 (ENSFCAG00000046792) #28 ZMPSTE24 (ENSFCAG00000005722) #29 TMCO2 (ENSFCAG00000013919) #30 RLF (ENSFCAG00000031737) #31 PPT1 (ENSFCAG00000023550) #32 CAP1 (ENSFCAG00000012460) #33 MFSD2A (ENSFCAG00000009858) #34 MYCL (ENSFCAG00000022640) #35 TRIT1 (ENSFCAG00000006029) #37 ENSFCAG00000045792 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401.e #15 ENSGT00940000161401.f #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000161166 Chiroptera ANCESTRAL SPECIES ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401.f #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000161166 Microchiroptera ANCESTRAL SPECIES 1 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401.f #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000161166 Microbat MODERN SPECIES 974 PPCS (ENSMLUG00000017041) #7 ZMYND12 (ENSMLUG00000017037) #8 RIMKLA (ENSMLUG00000005776) #9 FOXJ3 (ENSMLUG00000005770) #10 GUCA2A (ENSMLUG00000009372) #11 GUCA2B (ENSMLUG00000005765) #12 HIVEP3 (ENSMLUG00000004675) #13 EDN2 (ENSMLUG00000004668) #14 SCMH1 (ENSMLUG00000007367) #16 SLFNL1 (ENSMLUG00000007340) #17 CTPS1 (ENSMLUG00000007301) #18 ENSMLUG00000028437 ENSMLUG00000005293 KCNQ4 (ENSMLUG00000007262) #20 NFYC (ENSMLUG00000007242) #21 RIMS3 (ENSMLUG00000007201) #22 EXO5 (ENSMLUG00000014184) #24 ZFP69 (ENSMLUG00000012551) #25 NSUN4 (ENSMLUG00000005448) FAAH (ENSMLUG00000005452) ENSMLUG00000023470 DMBX1 (ENSMLUG00000005458) KNCN (ENSMLUG00000028209) MKNK1 (ENSMLUG00000007816) MOB3C (ENSMLUG00000007841) ATPAF1 (ENSMLUG00000007861) TEX38 (ENSMLUG00000029002) ENSMLUG00000014593 CYP4B1 (ENSMLUG00000002776) ENSMLUG00000024150 ENSMLUG00000025621 Greater horseshoe bat MODERN SPECIES 27 ENSRFEG00010005684 ZMYND12 (ENSRFEG00010005667) #8 RIMKLA (ENSRFEG00010005649) #9 FOXJ3 (ENSRFEG00010005612) #10 GUCA2A (ENSRFEG00010005573) #11 GUCA2B (ENSRFEG00010005559) #12 HIVEP3 (ENSRFEG00010005539) #13 EDN2 (ENSRFEG00010005516) #14 FOXO6 (ENSRFEG00010005506) #15 SCMH1 (ENSRFEG00010005358) #16 SLFNL1 (ENSRFEG00010005268) #17 CTPS1 (ENSRFEG00010005246) #18 CITED4 (ENSRFEG00010005224) #19 KCNQ4 (ENSRFEG00010005194) #20 NFYC (ENSRFEG00010005156) #21 RIMS3 (ENSRFEG00010005135) #22 ZNF684 (ENSRFEG00010004917) #23 EXO5 (ENSRFEG00010004913) #24 ZFP69 (ENSRFEG00010004907) #25 ZFP69B (ENSRFEG00010004898) #26 SMAP2 (ENSRFEG00010004874) #27 COL9A2 (ENSRFEG00010004846) #28 ZMPSTE24 (ENSRFEG00010004824) #29 TMCO2 (ENSRFEG00010004812) #30 ENSRFEG00010004804 RLF (ENSRFEG00010004791) #31 PPT1 (ENSRFEG00010004763) #32 ENSRFEG00010004740 #33 MFSD2A (ENSRFEG00010004694) #34 MYCL (ENSRFEG00010004654) #35 TRIT1 (ENSRFEG00010004607) #37 Megabat MODERN SPECIES 7856 RIMS3 (ENSPVAG00000000772) #22 Equus ANCESTRAL SPECIES 2 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401.e #15 ENSGT00940000161401.f #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000003897.s.a ENSGT00390000015214 #37 ENSGT00940000155272 Donkey MODERN SPECIES 25 ZMYND12 (ENSEASG00005001220) #8 RIMKLA (ENSEASG00005001217) #9 FOXJ3 (ENSEASG00005001210) #10 ENSEASG00005023801 #11 GUCA2B (ENSEASG00005001201) #12 ENSEASG00005036254 HIVEP3 (ENSEASG00005001186) #13 EDN2 (ENSEASG00005036084) #14 FOXO6 (ENSEASG00005029507) #15 SCMH1 (ENSEASG00005001142) #16 SLFNL1 (ENSEASG00005001127) #17 CTPS1 (ENSEASG00005001112) #18 CITED4 (ENSEASG00005001107) #19 KCNQ4 (ENSEASG00005001062) #20 NFYC (ENSEASG00005001046) #21 RIMS3 (ENSEASG00005001037) #22 EXO5 (ENSEASG00005037469) #24 ZNF684 (ENSEASG00005027767) #23 ZFP69 (ENSEASG00005035436) #25 ZFP69B (ENSEASG00005001020) #26 SMAP2 (ENSEASG00005001012) #27 ENSEASG00005000994 ZMPSTE24 (ENSEASG00005000980) #29 TMCO2 (ENSEASG00005000974) #30 RLF (ENSEASG00005000935) #31 ENSEASG00005000926 #32 ENSEASG00005026058 #32 CAP1 (ENSEASG00005000919) #33 MFSD2A (ENSEASG00005000914) #34 MYCL (ENSEASG00005000909) #35 ENSEASG00005000897 Horse MODERN SPECIES 11 PPCS (ENSECAG00000017987) RIMKLA (ENSECAG00000005880) #9 FOXJ3 (ENSECAG00000008665) #10 GUCA2A (ENSECAG00000015312) #11 GUCA2B (ENSECAG00000018081) #12 HIVEP3 (ENSECAG00000018490) #13 EDN2 (ENSECAG00000023173) #14 ENSECAG00000058410 #15 FOXO6 (ENSECAG00000002551) #15 SCMH1 (ENSECAG00000023200) #16 SLFNL1 (ENSECAG00000009666) #17 CTPS1 (ENSECAG00000010772) #18 CITED4 (ENSECAG00000034113) #19 KCNQ4 (ENSECAG00000021257) #20 NFYC (ENSECAG00000000678) #21 RIMS3 (ENSECAG00000021113) #22 ENSECAG00000048355 ZNF684 (ENSECAG00000022010) #23 ENSECAG00000047147 #23 EXO5 (ENSECAG00000004928) #24 ZFP69 (ENSECAG00000022039) #25 ZFP69B (ENSECAG00000023120) #26 SMAP2 (ENSECAG00000024413) #27 COL9A2 (ENSECAG00000010971) ZMPSTE24 (ENSECAG00000007773) #29 TMCO2 (ENSECAG00000037648) #30 RLF (ENSECAG00000012776) #31 PPT1 (ENSECAG00000017370) #32 CAP1 (ENSECAG00000024658) #33 ENSECAG00000052677 MFSD2A (ENSECAG00000013728) #34 Artiodactyla ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00390000009130.a.b Suina ANCESTRAL SPECIES 27 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272 Chacoan peccary MODERN SPECIES 54 ZMYND12 (ENSCWAG00000010714) #8 RIMKLA (ENSCWAG00000010781) #9 FOXJ3 (ENSCWAG00000010849) #10 GUCA2A (ENSCWAG00000011019) #11 GUCA2B (ENSCWAG00000011060) #12 ENSCWAG00000011100 HIVEP3 (ENSCWAG00000011126) #13 EDN2 (ENSCWAG00000011186) #14 FOXO6 (ENSCWAG00000011217) #15 SCMH1 (ENSCWAG00000011323) #16 SLFNL1 (ENSCWAG00000011645) #17 CTPS1 (ENSCWAG00000011769) #18 CITED4 (ENSCWAG00000011903) #19 KCNQ4 (ENSCWAG00000011931) #20 NFYC (ENSCWAG00000012236) #21 RIMS3 (ENSCWAG00000012432) #22 ENSCWAG00000012478 #23 ZNF684 (ENSCWAG00000012539) #23 EXO5 (ENSCWAG00000012561) #24 ZFP69 (ENSCWAG00000012581) #25 ZFP69B (ENSCWAG00000012643) #26 SMAP2 (ENSCWAG00000012703) #27 COL9A2 (ENSCWAG00000012744) #28 ZMPSTE24 (ENSCWAG00000013036) #29 TMCO2 (ENSCWAG00000013076) #30 RLF (ENSCWAG00000013118) #31 PPT1 (ENSCWAG00000013154) #32 CAP1 (ENSCWAG00000013235) #33 MFSD2A (ENSCWAG00000013374) #34 MYCL (ENSCWAG00000013677) #35 TRIT1 (ENSCWAG00000013773) #37 Pig MODERN SPECIES 14 PPCS (ENSSSCG00000058636) #7 ZMYND12 (ENSSSCG00000003967) #8 RIMKLA (ENSSSCG00000055268) #9 FOXJ3 (ENSSSCG00000023266) #10 GUCA2A (ENSSSCG00000055523) #11 GUCA2B (ENSSSCG00000003970) #12 ENSSSCG00000061658 EDN2 (ENSSSCG00000037856) #14 FOXO6 (ENSSSCG00000035074) #15 SCMH1 (ENSSSCG00000003971) #16 SLFNL1 (ENSSSCG00000003972) #17 CTPS1 (ENSSSCG00000003973) #18 ENSSSCG00000033952 KCNQ4 (ENSSSCG00000003975) #20 NFYC (ENSSSCG00000003976) #21 RIMS3 (ENSSSCG00000039245) #22 ENSSSCG00000055753 ZNF684 (ENSSSCG00000003979) #23 EXO5 (ENSSSCG00000003980) #24 ZFP69B (ENSSSCG00000003981) #26 SMAP2 (ENSSSCG00000003983) #27 Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00390000009130.a.b Camelidae ANCESTRAL SPECIES 11 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b.i #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00950000183074.A ENSGT00390000016232 ENSGT00390000009615 ENSGT00390000008413 ENSGT01030000234517.A ENSGT00940000158528.y.b ENSGT00390000008041.B ENSGT00940000157762 ENSGT00510000047245 ENSGT00950000182902.a.c ENSGT00940000156781 Alpaca MODERN SPECIES 434 NFYC (ENSVPAG00000003034) #21 RIMS3 (ENSVPAG00000003033) #22 ZNF684 (ENSVPAG00000003031) #23 ZFP69 (ENSVPAG00000003028) #25 ZFP69B (ENSVPAG00000003027) #26 SMAP2 (ENSVPAG00000003026) #27 ENSVPAG00000003024 ZMPSTE24 (ENSVPAG00000003023) #29 TMCO2 (ENSVPAG00000003021) #30 RLF (ENSVPAG00000003020) #31 PPT1 (ENSVPAG00000003014) #32 CAP1 (ENSVPAG00000003013) #33 ENSVPAG00000003009 #34 TRIT1 (ENSVPAG00000003008) #37 Arabian camel DUPLICATION Arabian camel MODERN SPECIES 4 ZMYND12 (ENSCDRG00005015787) #8 ENSCDRG00005015740 #9 FOXJ3 (ENSCDRG00005015630) #10 GUCA2A (ENSCDRG00005015592) #11 GUCA2B (ENSCDRG00005015564) #12 ENSCDRG00005015546 HIVEP3 (ENSCDRG00005015500) #13 EDN2 (ENSCDRG00005015453) #14 FOXO6 (ENSCDRG00005015434) #15 SCMH1 (ENSCDRG00005015060) #16 SLFNL1 (ENSCDRG00005014975) #17 CTPS1 (ENSCDRG00005014862) #18 CITED4 (ENSCDRG00005014841) #19 KCNQ4 (ENSCDRG00005014732) #20 NFYC (ENSCDRG00005014542) #21 RIMS3 (ENSCDRG00005014464) #22 ZNF684 (ENSCDRG00005014415) #23 ZFP69 (ENSCDRG00005014364) #25 ZFP69B (ENSCDRG00005014292) #26 SMAP2 (ENSCDRG00005014239) #27 ENSCDRG00005014109 ZMPSTE24 (ENSCDRG00005013984) #29 TMCO2 (ENSCDRG00005013941) #30 RLF (ENSCDRG00005013887) #31 PPT1 (ENSCDRG00005013620) #32 CAP1 (ENSCDRG00005013432) #33 MFSD2A (ENSCDRG00005013329) #34 MYCL (ENSCDRG00005013289) #35 TRIT1 (ENSCDRG00005012882) #37 ENSCDRG00005012813 ENSCDRG00005012658 Arabian camel MODERN SPECIES 28 KIN (ENSCDRG00005013334) ATP5F1C (ENSCDRG00005013234) TAF3 (ENSCDRG00005013133) GATA3 (ENSCDRG00005013070) ENSCDRG00005013023 ECHDC3 (ENSCDRG00005012903) ENSCDRG00005012867 USP6NL (ENSCDRG00005012758) ENSCDRG00005012636 ENSCDRG00005012536 ENSCDRG00005012517 ENSCDRG00005012476 ENSCDRG00005012459 CELF2 (ENSCDRG00005011385) ENSCDRG00005011327 ENSCDRG00005011299 #22 ENSCDRG00005011253 ENSCDRG00005011216 ENSCDRG00005011176 PROSER2 (ENSCDRG00005011144) PTCHD3 (ENSCDRG00005011097) MALRD1 (ENSCDRG00005010062) PLXDC2 (ENSCDRG00005009758) ENSCDRG00005009736 ENSCDRG00005009713 ENSCDRG00005009665 ENSCDRG00005009644 ENSCDRG00005009603 NEBL (ENSCDRG00005009232) ENSCDRG00005009125 ENSCDRG00005009074 Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Pecora ANCESTRAL SPECIES 2 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Yarkand deer MODERN SPECIES 12 RIMKLA (ENSCHYG00000026570) #9 FOXJ3 (ENSCHYG00000026583) #10 GUCA2A (ENSCHYG00000026642) #11 GUCA2B (ENSCHYG00000026652) #12 ENSCHYG00000026660 HIVEP3 (ENSCHYG00000026671) #13 ENSCHYG00000026693 #14 FOXO6 (ENSCHYG00000026701) #15 SCMH1 (ENSCHYG00000013603) #16 ENSCHYG00000014221 SLFNL1 (ENSCHYG00000014268) #17 CTPS1 (ENSCHYG00000014356) #18 CITED4 (ENSCHYG00000014495) #19 KCNQ4 (ENSCHYG00000014554) #20 NFYC (ENSCHYG00000015029) #21 RIMS3 (ENSCHYG00000015596) #22 ENSCHYG00000015713 ZNF684 (ENSCHYG00000015737) #23 EXO5 (ENSCHYG00000015822) #24 ZFP69 (ENSCHYG00000015853) #25 ZFP69B (ENSCHYG00000015997) #26 SMAP2 (ENSCHYG00000016181) #27 COL9A2 (ENSCHYG00000016349) #28 ZMPSTE24 (ENSCHYG00000017010) #29 TMCO2 (ENSCHYG00000017083) #30 RLF (ENSCHYG00000017117) #31 PPT1 (ENSCHYG00000017225) #32 CAP1 (ENSCHYG00000017634) #33 MFSD2A (ENSCHYG00000017841) #34 MYCL (ENSCHYG00000018013) #35 TRIT1 (ENSCHYG00000018136) #37 Percora_a ANCESTRAL SPECIES 1 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00390000009130.a.b Siberian musk deer MODERN SPECIES 341 ZMYND12 (ENSMMSG00000011979) #8 ENSMMSG00000012015 #9 FOXJ3 (ENSMMSG00000012062) #10 GUCA2A (ENSMMSG00000012152) #11 GUCA2B (ENSMMSG00000004328) #12 ENSMMSG00000004347 HIVEP3 (ENSMMSG00000004366) #13 EDN2 (ENSMMSG00000004392) #14 FOXO6 (ENSMMSG00000004411) #15 SCMH1 (ENSMMSG00000004452) #16 SLFNL1 (ENSMMSG00000004540) #17 CTPS1 (ENSMMSG00000004591) #18 CITED4 (ENSMMSG00000004673) #19 KCNQ4 (ENSMMSG00000004723) #20 NFYC (ENSMMSG00000004890) #21 RIMS3 (ENSMMSG00000005005) #22 ENSMMSG00000005033 #23 EXO5 (ENSMMSG00000005044) #24 ZFP69 (ENSMMSG00000005053) #25 SMAP2 (ENSMMSG00000005092) #27 TMCO2 (ENSMMSG00000005220) #30 COL9A2 (ENSMMSG00000005256) #28 ZMPSTE24 (ENSMMSG00000005324) #29 RLF (ENSMMSG00000005369) #31 ENSMMSG00000005421 PPT1 (ENSMMSG00000005470) #32 CAP1 (ENSMMSG00000005620) #33 MFSD2A (ENSMMSG00000005706) #34 MYCL (ENSMMSG00000005769) #35 TRIT1 (ENSMMSG00000005816) #37 ENSMMSG00000005898 Bovidae ANCESTRAL SPECIES 1 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272 Bovinae ANCESTRAL SPECIES 1 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00960000189866 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.d.a #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Bos ANCESTRAL SPECIES ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT01100000263481.n.a.b.b.a.a.a.a.a.a.b.a ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00960000189866 ENSGT00940000167707 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT01050000245142 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.d.a #33 ENSGT00390000005318.b.b.b #34 Bos_b ANCESTRAL SPECIES 1 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT01100000263481.n.a.b.b.a.a.a.a.a.a.b.a ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00960000189866 ENSGT00940000167707 ENSGT00940000158387 #27 ENSGT00390000002053 #29 ENSGT01050000245142 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.d.a #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 Cow MODERN SPECIES 22 PPCS (ENSBTAG00000012982) #7 ZMYND12 (ENSBTAG00000012979) #8 RIMKLA (ENSBTAG00000017502) #9 FOXJ3 (ENSBTAG00000015887) #10 GUCA2A (ENSBTAG00000007195) #11 GUCA2B (ENSBTAG00000007194) #12 HIVEP3 (ENSBTAG00000020745) #13 EDN2 (ENSBTAG00000021434) #14 FOXO6 (ENSBTAG00000024115) #15 SCMH1 (ENSBTAG00000001629) #16 SLFNL1 (ENSBTAG00000001628) #17 CTPS1 (ENSBTAG00000001626) #18 CITED4 (ENSBTAG00000015113) #19 KCNQ4 (ENSBTAG00000002644) #20 NFYC (ENSBTAG00000021943) #21 RIMS3 (ENSBTAG00000018726) #22 ENSBTAG00000034332 ZNF684 (ENSBTAG00000000533) #23 EXO5 (ENSBTAG00000000532) #24 ZFP69 (ENSBTAG00000039287) #25 ENSBTAG00000054444 SMAP2 (ENSBTAG00000021922) #27 ZMPSTE24 (ENSBTAG00000044178) #29 TMCO2 (ENSBTAG00000019698) #30 RLF (ENSBTAG00000019695) #31 PPT1 (ENSBTAG00000013367) #32 CAP1 (ENSBTAG00000013363) #33 MFSD2A (ENSBTAG00000013054) #34 MYCL (ENSBTAG00000054059) #35 TRIT1 (ENSBTAG00000013832) #37 ENSBTAG00000031600 Hybrid Bos Indicus MODERN SPECIES 22 RIMKLA (ENSBIXG00005029322) #9 FOXJ3 (ENSBIXG00005029367) #10 ENSBIXG00005029424 #11 GUCA2B (ENSBIXG00005029429) #12 ENSBIXG00005029448 ENSBIXG00005029452 HIVEP3 (ENSBIXG00005029468) #13 EDN2 (ENSBIXG00005029480) #14 FOXO6 (ENSBIXG00005029508) #15 SCMH1 (ENSBIXG00005029540) #16 ENSBIXG00005029585 CTPS1 (ENSBIXG00005029602) #18 SLFNL1 (ENSBIXG00005029661) #17 KCNQ4 (ENSBIXG00005029746) #20 NFYC (ENSBIXG00005029894) #21 RIMS3 (ENSBIXG00005029960) #22 ENSBIXG00005029984 ZNF684 (ENSBIXG00005029992) #23 EXO5 (ENSBIXG00005030004) #24 ZFP69 (ENSBIXG00005030017) #25 ENSBIXG00005030028 ENSBIXG00005030050 SMAP2 (ENSBIXG00005030073) #27 ENSBIXG00005030126 ZMPSTE24 (ENSBIXG00005030180) #29 ENSBIXG00005030197 TMCO2 (ENSBIXG00005030206) #30 RLF (ENSBIXG00005030215) #31 PPT1 (ENSBIXG00005030230) #32 ENSBIXG00005030267 #33 MFSD2A (ENSBIXG00005030283) #34 Bos_a ANCESTRAL SPECIES 1 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT01100000263481.n.a.b.b.a.a.a.a.a.a.b.a ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00960000189866 ENSGT00940000167707 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT01050000245142 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.d.a #33 ENSGT00390000005318.b.b.b #34 Wild yak MODERN SPECIES 1723 SCMH1 (ENSBMUG00000000534) #16 SLFNL1 (ENSBMUG00000000373) #17 CTPS1 (ENSBMUG00000000335) #18 KCNQ4 (ENSBMUG00000000106) #20 NFYC (ENSBMUG00000025058) #21 RIMS3 (ENSBMUG00000025036) #22 ENSBMUG00000025030 ZNF684 (ENSBMUG00000025026) #23 EXO5 (ENSBMUG00000025024) #24 ZFP69 (ENSBMUG00000025019) #25 Domestic yak MODERN SPECIES 22 ENSBGRG00000014045 ENSBGRG00000014074 ENSBGRG00000014097 HIVEP3 (ENSBGRG00000014136) #13 EDN2 (ENSBGRG00000014386) #14 FOXO6 (ENSBGRG00000014468) #15 SCMH1 (ENSBGRG00000014563) #16 ENSBGRG00000016010 ENSBGRG00000016036 #17 CTPS1 (ENSBGRG00000016063) #18 ENSBGRG00000016202 ENSBGRG00000016241 CITED4 (ENSBGRG00000016268) #19 KCNQ4 (ENSBGRG00000016298) #20 NFYC (ENSBGRG00000016660) #21 RIMS3 (ENSBGRG00000016850) #22 ENSBGRG00000016909 ZNF684 (ENSBGRG00000016941) #23 EXO5 (ENSBGRG00000017012) #24 ZFP69 (ENSBGRG00000017030) #25 ENSBGRG00000017070 SMAP2 (ENSBGRG00000017114) #27 COL9A2 (ENSBGRG00000017451) #28 ZMPSTE24 (ENSBGRG00000017914) #29 ENSBGRG00000018213 TMCO2 (ENSBGRG00000000230) #30 RLF (ENSBGRG00000000236) #31 ENSBGRG00000000267 #32 ENSBGRG00000000339 #33 MFSD2A (ENSBGRG00000000405) #34 MYCL (ENSBGRG00000000513) #35 American bison MODERN SPECIES 3342 RIMKLA (ENSBBBG00000001542) #9 FOXJ3 (ENSBBBG00000009523) #10 GUCA2A (ENSBBBG00000009517) #11 GUCA2B (ENSBBBG00000009516) #12 ENSBBBG00000009514 HIVEP3 (ENSBBBG00000001537) #13 EDN2 (ENSBBBG00000009510) #14 FOXO6 (ENSBBBG00000001535) #15 ENSBBBG00000001528 SCMH1 (ENSBBBG00000009494) #16 SLFNL1 (ENSBBBG00000009467) #17 CTPS1 (ENSBBBG00000001514) #18 ENSBBBG00000001511 KCNQ4 (ENSBBBG00000009444) #20 NFYC (ENSBBBG00000007388) #21 RIMS3 (ENSBBBG00000009436) #22 ENSBBBG00000001503 ZNF684 (ENSBBBG00000009434) #23 EXO5 (ENSBBBG00000001501) #24 ZFP69 (ENSBBBG00000001500) #25 ENSBBBG00000001499 ENSBBBG00000007872 SMAP2 (ENSBBBG00000009431) #27 COL9A2 (ENSBBBG00000001498) #28 ZMPSTE24 (ENSBBBG00000008896) #29 TMCO2 (ENSBBBG00000001497) #30 RLF (ENSBBBG00000001496) #31 PPT1 (ENSBBBG00000009427) #32 ENSBBBG00000008895 #33 MFSD2A (ENSBBBG00000009417) #34 MYCL (ENSBBBG00000001492) #35 Caprinae ANCESTRAL SPECIES 2 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999.b #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00390000009130.a.b Rambouillet Sheep MODERN SPECIES PPIH (ENSOARG00020000274) PPCS (ENSOARG00020000145) #7 ZMYND12 (ENSOARG00020000132) #8 RIMKLA (ENSOARG00020000124) #9 FOXJ3 (ENSOARG00020000103) #10 GUCA2A (ENSOARG00020000095) #11 GUCA2B (ENSOARG00020000089) #12 HIVEP3 (ENSOARG00020000082) #13 EDN2 (ENSOARG00020000081) #14 SCMH1 (ENSOARG00020000067) #16 SLFNL1 (ENSOARG00020000061) #17 CTPS1 (ENSOARG00020000058) #18 CITED4 (ENSOARG00020000054) #19 KCNQ4 (ENSOARG00020000050) #20 NFYC (ENSOARG00020000047) #21 RIMS3 (ENSOARG00020000046) #22 ENSOARG00020000045 ZNF684 (ENSOARG00020000044) #23 EXO5 (ENSOARG00020000039) #24 ZFP69 (ENSOARG00020026052) #25 SMAP2 (ENSOARG00020026036) #27 COL9A2 (ENSOARG00020026019) #28 ZMPSTE24 (ENSOARG00020026009) #29 TMCO2 (ENSOARG00020026004) #30 RLF (ENSOARG00020025999) #31 ENSOARG00020025995 PPT1 (ENSOARG00020025978) #32 CAP1 (ENSOARG00020025969) #33 MFSD2A (ENSOARG00020025960) #34 ENSOARG00020025955 #35 TRIT1 (ENSOARG00020025939) #37 Goat MODERN SPECIES 22 ZMYND12 (ENSCHIG00000007728) #8 RIMKLA (ENSCHIG00000015404) #9 FOXJ3 (ENSCHIG00000021942) #10 GUCA2A (ENSCHIG00000005275) #11 GUCA2B (ENSCHIG00000019738) #12 ENSCHIG00000012856 HIVEP3 (ENSCHIG00000011517) #13 EDN2 (ENSCHIG00000024063) #14 FOXO6 (ENSCHIG00000018218) #15 SCMH1 (ENSCHIG00000024918) #16 SLFNL1 (ENSCHIG00000015962) #17 CTPS1 (ENSCHIG00000026631) #18 CITED4 (ENSCHIG00000013877) #19 KCNQ4 (ENSCHIG00000014613) #20 NFYC (ENSCHIG00000021122) #21 RIMS3 (ENSCHIG00000008574) #22 ENSCHIG00000018474 ZNF684 (ENSCHIG00000014482) #23 EXO5 (ENSCHIG00000007542) #24 ZFP69 (ENSCHIG00000008554) #25 ENSCHIG00000001509 SMAP2 (ENSCHIG00000026204) #27 ZMPSTE24 (ENSCHIG00000014367) #29 TMCO2 (ENSCHIG00000020895) #30 RLF (ENSCHIG00000008734) #31 PPT1 (ENSCHIG00000024964) #32 ENSCHIG00000021156 #33 MFSD2A (ENSCHIG00000005567) #34 MYCL (ENSCHIG00000017111) #35 TRIT1 (ENSCHIG00000013259) #37 ENSCHIG00000019430 Cetacea ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00390000018145.xc.a.b ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Odontoceti ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00390000018145.xc.a.b ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Odontoceti_a ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00390000018145.xc.a.b ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Odontoceti_b ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00390000018145.xc.a.b ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000154732.r ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 Monodontidae ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00390000018145.xc.a.b ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000016051.i ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000154732.r ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 Beluga whale MODERN SPECIES 74 ZMYND12 (ENSDLEG00000021604) #8 RIMKLA (ENSDLEG00000021602) #9 FOXJ3 (ENSDLEG00000021596) #10 GUCA2A (ENSDLEG00000021593) #11 GUCA2B (ENSDLEG00000021590) #12 ENSDLEG00000021586 HIVEP3 (ENSDLEG00000021584) #13 EDN2 (ENSDLEG00000021581) #14 FOXO6 (ENSDLEG00000021576) #15 SCMH1 (ENSDLEG00000021571) #16 SLFNL1 (ENSDLEG00000021566) #17 CTPS1 (ENSDLEG00000021563) #18 CITED4 (ENSDLEG00000021561) #19 KCNQ4 (ENSDLEG00000021558) #20 NFYC (ENSDLEG00000021556) #21 RIMS3 (ENSDLEG00000021553) #22 ENSDLEG00000021551 ZNF684 (ENSDLEG00000021547) #23 EXO5 (ENSDLEG00000021545) #24 ZFP69 (ENSDLEG00000021544) #25 ZFP69B (ENSDLEG00000021542) #26 ENSDLEG00000021541 SMAP2 (ENSDLEG00000021539) #27 COL9A2 (ENSDLEG00000021538) #28 ZMPSTE24 (ENSDLEG00000021536) #29 TMCO2 (ENSDLEG00000021535) #30 RLF (ENSDLEG00000021532) #31 PPT1 (ENSDLEG00000021528) #32 CAP1 (ENSDLEG00000021526) #33 MFSD2A (ENSDLEG00000021522) #34 MYCL (ENSDLEG00000021520) #35 Narwhal MODERN SPECIES 304 ZMYND12 (ENSMMNG00015007834) #8 RIMKLA (ENSMMNG00015007858) #9 FOXJ3 (ENSMMNG00015007886) #10 GUCA2A (ENSMMNG00015007926) #11 GUCA2B (ENSMMNG00015007941) #12 HIVEP3 (ENSMMNG00015007974) #13 EDN2 (ENSMMNG00015007991) #14 ENSMMNG00015008007 FOXO6 (ENSMMNG00015008018) #15 SCMH1 (ENSMMNG00015008141) #16 SLFNL1 (ENSMMNG00015008283) #17 CTPS1 (ENSMMNG00015008311) #18 CITED4 (ENSMMNG00015005346) #19 KCNQ4 (ENSMMNG00015005375) #20 NFYC (ENSMMNG00015005483) #21 RIMS3 (ENSMMNG00015005511) #22 ENSMMNG00015005529 ZNF684 (ENSMMNG00015005545) #23 ZFP69 (ENSMMNG00015005572) #25 ZFP69B (ENSMMNG00015005594) #26 SMAP2 (ENSMMNG00015005643) #27 ENSMMNG00015005687 COL9A2 (ENSMMNG00015005714) #28 ZMPSTE24 (ENSMMNG00015005742) #29 TMCO2 (ENSMMNG00015005776) #30 RLF (ENSMMNG00015005790) #31 PPT1 (ENSMMNG00015005839) #32 CAP1 (ENSMMNG00015005895) #33 MFSD2A (ENSMMNG00015005948) #34 MYCL (ENSMMNG00015006076) #35 TRIT1 (ENSMMNG00015006142) #37 Vaquita MODERN SPECIES RIMKLA (ENSPSNG00000001330) #9 FOXJ3 (ENSPSNG00000001302) #10 GUCA2A (ENSPSNG00000001265) #11 GUCA2B (ENSPSNG00000001245) #12 ENSPSNG00000001228 ENSPSNG00000001210 HIVEP3 (ENSPSNG00000001194) #13 EDN2 (ENSPSNG00000001170) #14 FOXO6 (ENSPSNG00000001152) #15 SCMH1 (ENSPSNG00000001014) #16 SLFNL1 (ENSPSNG00000000882) #17 CTPS1 (ENSPSNG00000000839) #18 CITED4 (ENSPSNG00000000821) #19 KCNQ4 (ENSPSNG00000000769) #20 NFYC (ENSPSNG00000000678) #21 RIMS3 (ENSPSNG00000000591) #22 ENSPSNG00000000577 ENSPSNG00000000535 #23 ZNF684 (ENSPSNG00000000492) #23 EXO5 (ENSPSNG00000000484) #24 ZFP69 (ENSPSNG00000000470) #25 ZFP69B (ENSPSNG00000000443) #26 ENSPSNG00000000420 SMAP2 (ENSPSNG00000000368) #27 COL9A2 (ENSPSNG00000000303) #28 ZMPSTE24 (ENSPSNG00000000265) #29 TMCO2 (ENSPSNG00000000247) #30 RLF (ENSPSNG00000000213) #31 PPT1 (ENSPSNG00000000185) #32 CAP1 (ENSPSNG00000000118) #33 MFSD2A (ENSPSNG00000000074) #34 Dolphin MODERN SPECIES 3603 RIMS3 (ENSTTRG00000001142) #22 Sperm whale MODERN SPECIES 14 PPIH (ENSPCTG00005020154) CCDC30 (ENSPCTG00005020273) PPCS (ENSPCTG00005020632) #7 ZMYND12 (ENSPCTG00005020695) #8 RIMKLA (ENSPCTG00005020737) #9 FOXJ3 (ENSPCTG00005020773) #10 GUCA2A (ENSPCTG00005000204) #11 GUCA2B (ENSPCTG00005000211) #12 ENSPCTG00005000219 ENSPCTG00005000247 EDN2 (ENSPCTG00005000271) #14 SCMH1 (ENSPCTG00005000419) #16 CTPS1 (ENSPCTG00005000566) #18 NFYC (ENSPCTG00005000651) #21 ENSPCTG00005000702 RIMS3 (ENSPCTG00005000713) #22 ENSPCTG00005000725 ZNF684 (ENSPCTG00005000746) #23 EXO5 (ENSPCTG00005000767) #24 ZFP69 (ENSPCTG00005000774) #25 ZFP69B (ENSPCTG00005000787) #26 SMAP2 (ENSPCTG00005000816) #27 ENSPCTG00005000858 COL9A2 (ENSPCTG00005000884) #28 ZMPSTE24 (ENSPCTG00005000946) #29 TMCO2 (ENSPCTG00005000997) #30 RLF (ENSPCTG00005001013) #31 PPT1 (ENSPCTG00005001029) #32 ENSPCTG00005001041 #33 MYCL (ENSPCTG00005001056) #35 TRIT1 (ENSPCTG00005001108) #37 Blue whale MODERN SPECIES FOXJ3 (ENSBMSG00010010186) #10 GUCA2A (ENSBMSG00010010152) #11 GUCA2B (ENSBMSG00010010144) #12 ENSBMSG00010010128 ENSBMSG00010010121 HIVEP3 (ENSBMSG00010010109) #13 EDN2 (ENSBMSG00010010097) #14 ENSBMSG00010010082 FOXO6 (ENSBMSG00010010077) #15 SCMH1 (ENSBMSG00010009943) #16 SLFNL1 (ENSBMSG00010009885) #17 CTPS1 (ENSBMSG00010009804) #18 CITED4 (ENSBMSG00010009759) #19 KCNQ4 (ENSBMSG00010009743) #20 NFYC (ENSBMSG00010009698) #21 RIMS3 (ENSBMSG00010009686) #22 ENSBMSG00010009674 ZNF684 (ENSBMSG00010009663) #23 EXO5 (ENSBMSG00010009654) #24 ZFP69 (ENSBMSG00010009643) #25 ENSBMSG00010009632 ENSBMSG00010009624 SMAP2 (ENSBMSG00010009600) #27 COL9A2 (ENSBMSG00010003237) #28 ZMPSTE24 (ENSBMSG00010003220) #29 TMCO2 (ENSBMSG00010003207) #30 RLF (ENSBMSG00010003196) #31 PPT1 (ENSBMSG00010003133) #32 CAP1 (ENSBMSG00010003102) #33 MFSD2A (ENSBMSG00010003050) #34 MYCL (ENSBMSG00010003030) #35 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000159332 #22 Hedgehog MODERN SPECIES 1872 RIMS3 (ENSEEUG00000007448) #22 Common shrew MODERN SPECIES 1311 RIMS3 (ENSSARG00000008483) #22 Euarchontoglires ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000164770 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000164770 Glires ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000164770 Rodentia ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000164770 Rodentia_B ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT01100000264574 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000158790 ENSGT00940000161166 ENSGT00390000017767.b.b Myomorpha ANCESTRAL SPECIES 3 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT01100000264574 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000158790 ENSGT00940000161166 ENSGT00390000017767.b.b Muroidea ANCESTRAL SPECIES 3 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT01100000264574 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000158790 ENSGT00940000161166 ENSGT00390000017767.b.b Muroidea_A ANCESTRAL SPECIES 3 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000164770.b ENSGT00940000158790 ENSGT00940000161166 Murinae ANCESTRAL SPECIES 2 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000164770.b ENSGT00390000009130.a.b ENSGT00940000158790 Mus ANCESTRAL SPECIES 3 ENSGT00390000014577.b #9 ENSGT00530000064266 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00860000135841 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00390000000102.b ENSGT00390000000102.a ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000164770.b Mus_A ANCESTRAL SPECIES 3 ENSGT00390000014577.b #9 ENSGT00530000064266 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b.g #18 ENSGT00860000135841 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000164770.b ENSGT00390000009130.a.b ENSGT00940000158790 Ryukyu mouse MODERN SPECIES 13 Rimkla (MGP_CAROLIEiJ_G0026401) #9 Frg2f1 (MGP_CAROLIEiJ_G0026402) Foxj3 (MGP_CAROLIEiJ_G0026403) #10 Guca2a (MGP_CAROLIEiJ_G0026404) #11 Guca2b (MGP_CAROLIEiJ_G0026405) #12 Hivep3 (MGP_CAROLIEiJ_G0026406) #13 Edn2 (MGP_CAROLIEiJ_G0026407) #14 Foxo6 (MGP_CAROLIEiJ_G0026408) #15 Scmh1 (MGP_CAROLIEiJ_G0026409) #16 Slfnl1 (MGP_CAROLIEiJ_G0026410) #17 Ctps (MGP_CAROLIEiJ_G0026411) #18 MGP_CAROLIEiJ_G0026412 Cited4 (MGP_CAROLIEiJ_G0026413) #19 Kcnq4 (MGP_CAROLIEiJ_G0026414) #20 Nfyc (MGP_CAROLIEiJ_G0026415) #21 Rims3 (MGP_CAROLIEiJ_G0026416) #22 Exo5 (MGP_CAROLIEiJ_G0026417) #24 Zfp69 (MGP_CAROLIEiJ_G0026418) #25 Smap2 (MGP_CAROLIEiJ_G0026419) #27 Col9a2 (MGP_CAROLIEiJ_G0026420) #28 Zmpste24 (MGP_CAROLIEiJ_G0026421) #29 Tmco2 (MGP_CAROLIEiJ_G0026422) #30 Rlf (MGP_CAROLIEiJ_G0026423) #31 Ppt1 (MGP_CAROLIEiJ_G0026424) #32 Cap1 (MGP_CAROLIEiJ_G0026425) #33 Mfsd2a (MGP_CAROLIEiJ_G0026426) #34 Mycl (MGP_CAROLIEiJ_G0026427) #35 Trit1 (MGP_CAROLIEiJ_G0026428) #37 Bmp8b (MGP_CAROLIEiJ_G0026429) MGP_CAROLIEiJ_G0026430 Ppie (MGP_CAROLIEiJ_G0026431) Mus_B ANCESTRAL SPECIES 5 ENSGT00390000014577.b #9 ENSGT00530000064266 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b.g #18 ENSGT00860000135841 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00390000000102.b.b.b ENSGT00390000000102.b.b.a ENSGT00390000000102.a ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Mouse MODERN SPECIES 13 Rimkla (ENSMUSG00000048899) #9 Frg2f1 (ENSMUSG00000087385) Foxj3 (ENSMUSG00000032998) #10 Guca2a (ENSMUSG00000023247) #11 Guca2b (ENSMUSG00000032978) #12 Hivep3 (ENSMUSG00000028634) #13 Gm55960 (ENSMUSG00000115115) Edn2 (ENSMUSG00000028635) #14 Foxo6 (ENSMUSG00000052135) #15 Scmh1 (ENSMUSG00000000085) #16 Slfnl1 (ENSMUSG00000047518) #17 Ctps (ENSMUSG00000028633) #18 Cited4 (ENSMUSG00000070803) #19 Kcnq4 (ENSMUSG00000028631) #20 Nfyc (ENSMUSG00000032897) #21 Rims3 (ENSMUSG00000032890) #22 Exo5 (ENSMUSG00000028629) #24 Zfp69 (ENSMUSG00000064141) #25 Smap2 (ENSMUSG00000032870) #27 Col9a2 (ENSMUSG00000028626) #28 Zmpste24 (ENSMUSG00000043207) #29 Tmco2 (ENSMUSG00000078577) #30 Rlf (ENSMUSG00000049878) #31 Gm12888 (ENSMUSG00000073764) Gm12886 (ENSMUSG00000078576) Gm12887 (ENSMUSG00000078575) 9530002B09Rik (ENSMUSG00000023263) Ppt1 (ENSMUSG00000028657) #32 Cap1 (ENSMUSG00000028656) #33 Mfsd2a (ENSMUSG00000028655) #34 Mycl (ENSMUSG00000028654) #35 Mus_C ANCESTRAL SPECIES 2 ENSGT00390000014577.b #9 ENSGT00530000064266 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b.g #18 ENSGT00860000135841 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00390000000102.b.a ENSGT00390000000102.b.b.a ENSGT00390000000102.a ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Steppe mouse MODERN SPECIES 3192 Foxj3 (ENSMSIG00000010593) #10 ENSMSIG00000010554 #11 Guca2b (ENSMSIG00000010523) #12 ENSMSIG00000010517 Gm55960 (ENSMSIG00000010500) Hivep3 (ENSMSIG00000010455) #13 Edn2 (ENSMSIG00000010433) #14 Foxo6 (ENSMSIG00000010418) #15 Scmh1 (ENSMSIG00000010338) #16 Slfnl1 (ENSMSIG00000010327) #17 Ctps (ENSMSIG00000010291) #18 ENSMSIG00000010277 Cited4 (ENSMSIG00000010267) #19 Kcnq4 (ENSMSIG00000010258) #20 Nfyc (ENSMSIG00000010169) #21 Rims3 (ENSMSIG00000010151) #22 Exo5 (ENSMSIG00000010139) #24 Zfp69 (ENSMSIG00000010091) #25 Smap2 (ENSMSIG00000010052) #27 Col9a2 (ENSMSIG00000010004) #28 Zmpste24 (ENSMSIG00000009797) #29 Tmco2 (ENSMSIG00000009780) #30 Rlf (ENSMSIG00000009747) #31 ENSMSIG00000009736 Gm12886 (ENSMSIG00000009722) spretus MODERN SPECIES 13 Rimkla (MGP_SPRETEiJ_G0027378) #9 Frg2f1 (MGP_SPRETEiJ_G0027379) Foxj3 (MGP_SPRETEiJ_G0027380) #10 Guca2a (MGP_SPRETEiJ_G0027381) #11 Guca2b (MGP_SPRETEiJ_G0027382) #12 Hivep3 (MGP_SPRETEiJ_G0027383) #13 Edn2 (MGP_SPRETEiJ_G0027384) #14 Foxo6 (MGP_SPRETEiJ_G0027385) #15 Scmh1 (MGP_SPRETEiJ_G0027386) #16 Slfnl1 (MGP_SPRETEiJ_G0027387) #17 Ctps (MGP_SPRETEiJ_G0027388) #18 MGP_SPRETEiJ_G0027389 Cited4 (MGP_SPRETEiJ_G0027390) #19 Kcnq4 (MGP_SPRETEiJ_G0027391) #20 Nfyc (MGP_SPRETEiJ_G0027392) #21 Rims3 (MGP_SPRETEiJ_G0027393) #22 Exo5 (MGP_SPRETEiJ_G0027394) #24 Zfp69 (MGP_SPRETEiJ_G0027395) #25 Smap2 (MGP_SPRETEiJ_G0027396) #27 Col9a2 (MGP_SPRETEiJ_G0027397) #28 Zmpste24 (MGP_SPRETEiJ_G0027398) #29 Tmco2 (MGP_SPRETEiJ_G0027399) #30 Rlf (MGP_SPRETEiJ_G0027400) #31 MGP_SPRETEiJ_G0027401 MGP_SPRETEiJ_G0027402 MGP_SPRETEiJ_G0027403 Ppt1 (MGP_SPRETEiJ_G0027404) #32 Cap1 (MGP_SPRETEiJ_G0027405) #33 Mfsd2a (MGP_SPRETEiJ_G0027406) #34 MGP_SPRETEiJ_G0027407 #35 Trit1 (MGP_SPRETEiJ_G0027408) #37 Shrew mouse MODERN SPECIES 19 Rimkla (MGP_PahariEiJ_G0028730) #9 MGP_PahariEiJ_G0028731 Foxj3 (MGP_PahariEiJ_G0028732) #10 Guca2a (MGP_PahariEiJ_G0028733) #11 MGP_PahariEiJ_G0028734 #12 Hivep3 (MGP_PahariEiJ_G0028735) #13 Edn2 (MGP_PahariEiJ_G0028736) #14 Foxo6 (MGP_PahariEiJ_G0028737) #15 Scmh1 (MGP_PahariEiJ_G0028738) #16 Slfnl1 (MGP_PahariEiJ_G0028739) #17 Ctps (MGP_PahariEiJ_G0028740) #18 MGP_PahariEiJ_G0028741 Cited4 (MGP_PahariEiJ_G0028742) #19 Kcnq4 (MGP_PahariEiJ_G0028743) #20 Nfyc (MGP_PahariEiJ_G0028744) #21 Rims3 (MGP_PahariEiJ_G0028745) #22 Exo5 (MGP_PahariEiJ_G0028746) #24 MGP_PahariEiJ_G0028747 #25 Smap2 (MGP_PahariEiJ_G0028748) #27 Col9a2 (MGP_PahariEiJ_G0028749) #28 Zmpste24 (MGP_PahariEiJ_G0028750) #29 Tmco2 (MGP_PahariEiJ_G0028751) #30 Rlf (MGP_PahariEiJ_G0028752) #31 MGP_PahariEiJ_G0028753 Ppt1 (MGP_PahariEiJ_G0028754) #32 Cap1 (MGP_PahariEiJ_G0028755) #33 Mfsd2a (MGP_PahariEiJ_G0028756) #34 Mycl (MGP_PahariEiJ_G0028757) #35 Trit1 (MGP_PahariEiJ_G0028758) #37 MGP_PahariEiJ_G0028759 MGP_PahariEiJ_G0028760 Rat MODERN SPECIES 15 ENSRNOG00000069006 Rimkla (ENSRNOG00000008625) #9 Foxj3 (ENSRNOG00000061851) #10 Rps27a-ps1 (ENSRNOG00000034246) Guca2a (ENSRNOG00000008849) #11 Guca2b (ENSRNOG00000008979) #12 Hivep3 (ENSRNOG00000009341) #13 Edn2 (ENSRNOG00000009390) #14 Foxo6 (ENSRNOG00000032639) #15 Slfnl1 (ENSRNOG00000032183) #16 Ctps1 (ENSRNOG00000009963) #18 ENSRNOG00000065971 Cited4 (ENSRNOG00000046607) #19 Kcnq4 (ENSRNOG00000060435) #20 Nfyc (ENSRNOG00000010735) #21 Rims3 (ENSRNOG00000011171) #22 Exo5 (ENSRNOG00000037432) #24 Zfp69 (ENSRNOG00000028662) #25 Smap2 (ENSRNOG00000011421) #27 LOC680700 (ENSRNOG00000011484) Col9a2 (ENSRNOG00000011502) #28 Zmpste24 (ENSRNOG00000012054) #29 Tmco2 (ENSRNOG00000012340) #30 Rlf (ENSRNOG00000027921) #31 AC124205.2 (ENSRNOG00000059975) Twf1-ps1 (ENSRNOG00000012595) Ppt1 (ENSRNOG00000012616) #32 Cap1 (ENSRNOG00000013492) #33 Mfsd2a (ENSRNOG00000014008) #34 Mycl (ENSRNOG00000014259) #35 Trit1 (ENSRNOG00000014274) #37 Cricetidae ANCESTRAL SPECIES 2 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000164770.b ENSGT00940000158790 ENSGT00940000161166 Cricetinae ANCESTRAL SPECIES 5 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00900000143347 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000164770.b ENSGT00940000158790 ENSGT00940000161166 Chinese hamster chok1gshd MODERN SPECIES 111 Rimkla (ENSCGRG00001011564) #9 ENSCGRG00001005285 Foxj3 (ENSCGRG00001024073) #10 Guca2a (ENSCGRG00001020375) #11 Guca2b (ENSCGRG00001019230) #12 ENSCGRG00001018314 Hivep3 (ENSCGRG00001024833) #13 Edn2 (ENSCGRG00001024277) #14 Foxo6 (ENSCGRG00001020370) #15 Scmh1 (ENSCGRG00001019038) #16 Slfnl1 (ENSCGRG00001004308) #17 Ctps (ENSCGRG00001025038) #18 Cited4 (ENSCGRG00001010621) #19 Kcnq4 (ENSCGRG00001015701) #20 Nfyc (ENSCGRG00001012554) #21 Rims3 (ENSCGRG00001020274) #22 Exo5 (ENSCGRG00001006191) #24 Zfp69 (ENSCGRG00001020565) #25 Smap2 (ENSCGRG00001019982) #27 Col9a2 (ENSCGRG00001015354) #28 Zmpste24 (ENSCGRG00001013492) #29 Tmco2 (ENSCGRG00001013255) #30 Rlf (ENSCGRG00001007124) #31 ENSCGRG00001001757 ENSCGRG00001019636 ENSCGRG00001019698 Ppt1 (ENSCGRG00001017317) #32 Cap1 (ENSCGRG00001014999) #33 Mfsd2a (ENSCGRG00001012559) #34 Mycl (ENSCGRG00001012143) #35 Trit1 (ENSCGRG00001001894) #37 Golden Hamster MODERN SPECIES 773 Zmynd12 (ENSMAUG00000005478) #8 Rimkla (ENSMAUG00000012694) #9 ENSMAUG00000009384 #10 Guca2a (ENSMAUG00000013195) #11 Guca2b (ENSMAUG00000010390) #12 ENSMAUG00000020202 Hivep3 (ENSMAUG00000021204) #13 Edn2 (ENSMAUG00000004856) #14 Foxo6 (ENSMAUG00000020845) #15 Scmh1 (ENSMAUG00000000798) #16 Slfnl1 (ENSMAUG00000016329) #17 Ctps (ENSMAUG00000020664) #18 Cited4 (ENSMAUG00000004452) #19 Kcnq4 (ENSMAUG00000013747) #20 Nfyc (ENSMAUG00000018833) #21 Rims3 (ENSMAUG00000009951) #22 Exo5 (ENSMAUG00000008509) #24 Zfp69 (ENSMAUG00000014135) #25 Smap2 (ENSMAUG00000011611) #27 Col9a2 (ENSMAUG00000008045) #28 Zmpste24 (ENSMAUG00000018975) #29 Tmco2 (ENSMAUG00000005482) #30 ENSMAUG00000010438 #31 ENSMAUG00000007157 #31 Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000161166 Northern American deer mouse MODERN SPECIES 11 Foxj3 (ENSPEMG00000024269) #10 Guca2a (ENSPEMG00000029117) #11 Guca2b (ENSPEMG00000018121) #12 ENSPEMG00000025907 Gm55960 (ENSPEMG00000024634) Hivep3 (ENSPEMG00000009270) #13 Edn2 (ENSPEMG00000023929) #14 Foxo6 (ENSPEMG00000026784) #15 Scmh1 (ENSPEMG00000007400) #16 Slfnl1 (ENSPEMG00000011226) #17 Ctps (ENSPEMG00000011065) #18 ENSPEMG00000008453 Cited4 (ENSPEMG00000006760) #19 Kcnq4 (ENSPEMG00000010808) #20 Nfyc (ENSPEMG00000008178) #21 Rims3 (ENSPEMG00000029843) #22 Exo5 (ENSPEMG00000024028) #24 Zfp69 (ENSPEMG00000004280) #25 Smap2 (ENSPEMG00000022978) #27 Col9a2 (ENSPEMG00000018729) #28 Zmpste24 (ENSPEMG00000017887) #29 Tmco2 (ENSPEMG00000018032) #30 Rlf (ENSPEMG00000027824) #31 ENSPEMG00000009772 ENSPEMG00000030310 Ppt1 (ENSPEMG00000008449) #32 Cap1 (ENSPEMG00000021949) #33 Mfsd2a (ENSPEMG00000022479) #34 Mycl (ENSPEMG00000029362) #35 Trit1 (ENSPEMG00000022418) #37 ENSPEMG00000024171 Prairie vole MODERN SPECIES 1 Zmynd12 (ENSMOCG00000005965) #8 Rimkla (ENSMOCG00000020203) #9 Foxj3 (ENSMOCG00000021577) #10 Guca2a (ENSMOCG00000018839) #11 Guca2b (ENSMOCG00000011621) #12 Hivep3 (ENSMOCG00000012152) #13 Edn2 (ENSMOCG00000009940) #14 Foxo6 (ENSMOCG00000007735) #15 Scmh1 (ENSMOCG00000001256) #16 Slfnl1 (ENSMOCG00000019476) #17 Ctps (ENSMOCG00000003282) #18 Cited4 (ENSMOCG00000008568) #19 Kcnq4 (ENSMOCG00000010712) #20 Nfyc (ENSMOCG00000018240) #21 ENSMOCG00000010327 Rims3 (ENSMOCG00000002716) #22 Exo5 (ENSMOCG00000009071) #24 Zfp69 (ENSMOCG00000001233) #25 Smap2 (ENSMOCG00000003493) #27 Col9a2 (ENSMOCG00000016172) #28 Zmpste24 (ENSMOCG00000001622) #29 Tmco2 (ENSMOCG00000008800) #30 Rlf (ENSMOCG00000021851) #31 Ppt1 (ENSMOCG00000015437) #32 ENSMOCG00000005738 #33 Mfsd2a (ENSMOCG00000020481) #34 Mycl (ENSMOCG00000021799) #35 Trit1 (ENSMOCG00000008173) #37 Bmp8b (ENSMOCG00000022145) ENSMOCG00000018443 Hpcal4 (ENSMOCG00000017738) Upper Galilee mountains blind mole rat MODERN SPECIES 919 Rimkla (ENSNGAG00000014222) #9 Foxj3 (ENSNGAG00000016213) #10 Guca2a (ENSNGAG00000000085) #11 ENSNGAG00000000255 #12 Hivep3 (ENSNGAG00000012662) #13 Edn2 (ENSNGAG00000001608) #14 ENSNGAG00000002325 ENSNGAG00000002409 Foxo6 (ENSNGAG00000012477) #15 Scmh1 (ENSNGAG00000014078) #16 Slfnl1 (ENSNGAG00000014590) #17 Ctps (ENSNGAG00000015034) #18 Kcnq4 (ENSNGAG00000016120) #20 ENSNGAG00000016750 #21 Rims3 (ENSNGAG00000001545) #22 Lesser Egyptian jerboa MODERN SPECIES 188 Ppcs (ENSJJAG00000009656) #7 Zmynd12 (ENSJJAG00000010097) #8 Rimkla (ENSJJAG00000011118) #9 Foxj3 (ENSJJAG00000018049) #10 Guca2a (ENSJJAG00000009524) #11 ENSJJAG00000009743 #12 Hivep3 (ENSJJAG00000011284) #13 Edn2 (ENSJJAG00000016538) #14 Foxo6 (ENSJJAG00000016967) #15 Scmh1 (ENSJJAG00000019805) #16 Slfnl1 (ENSJJAG00000001004) #17 Ctps (ENSJJAG00000004694) #18 Cited4 (ENSJJAG00000000618) #19 Kcnq4 (ENSJJAG00000017406) #20 Nfyc (ENSJJAG00000019128) #21 Rims3 (ENSJJAG00000023746) #22 Exo5 (ENSJJAG00000014170) #24 Zfp69 (ENSJJAG00000002605) #25 Lao1 (ENSJJAG00000021697) Slc2a1 (ENSJJAG00000011969) Ermap (ENSJJAG00000020191) ENSJJAG00000017706 Toe1 (ENSJJAG00000021743) Mutyh (ENSJJAG00000023872) Hpdl (ENSJJAG00000014348) Zswim5 (ENSJJAG00000019970) ENSJJAG00000000200 Urod (ENSJJAG00000006308) Hectd3 (ENSJJAG00000018823) ENSJJAG00000014051 Eif2b3 (ENSJJAG00000022753) Kangaroo rat MODERN SPECIES 352 Ppcs (ENSDORG00000015843) #7 Zmynd12 (ENSDORG00000015840) #8 Rimkla (ENSDORG00000015839) #9 Foxj3 (ENSDORG00000015838) #10 Guca2a (ENSDORG00000015837) #11 ENSDORG00000015916 #12 Hivep3 (ENSDORG00000006074) #13 Edn2 (ENSDORG00000006073) #14 Foxo6 (ENSDORG00000024053) #15 Scmh1 (ENSDORG00000004955) #16 Slfnl1 (ENSDORG00000004953) #17 Ctps (ENSDORG00000007319) #18 Cited4 (ENSDORG00000024161) #19 Kcnq4 (ENSDORG00000009865) #20 Nfyc (ENSDORG00000009863) #21 Rims3 (ENSDORG00000014652) #22 Exo5 (ENSDORG00000003571) #24 Zfp69 (ENSDORG00000024989) #25 Smap2 (ENSDORG00000016161) #27 Col9a2 (ENSDORG00000014027) #28 Zmpste24 (ENSDORG00000014026) #29 Tmco2 (ENSDORG00000024253) #30 Rlf (ENSDORG00000010416) #31 Ppt1 (ENSDORG00000027642) #32 ENSDORG00000003053 #33 Mfsd2a (ENSDORG00000012839) #34 Mycl (ENSDORG00000026501) #35 Trit1 (ENSDORG00000012449) #37 ENSDORG00000025089 Ppie (ENSDORG00000005175) Hpcal4 (ENSDORG00000005161) Rodentia_A ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00390000009130.a.b Hystricomorpha ANCESTRAL SPECIES 4 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT01100000264574 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00390000009130.a.b ENSGT00940000155272 Hystricomorpha_a ANCESTRAL SPECIES 1 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00940000158790 Guinea pig MODERN SPECIES 179 ENSCPOG00000034632 #10 GUCA2A (ENSCPOG00000006795) #11 GUCA2B (ENSCPOG00000006789) #12 HIVEP3 (ENSCPOG00000040721) #13 EDN2 (ENSCPOG00000011158) #14 FOXO6 (ENSCPOG00000022256) #15 SCMH1 (ENSCPOG00000003397) #16 SLFNL1 (ENSCPOG00000003395) #17 CTPS1 (ENSCPOG00000003389) #18 CITED4 (ENSCPOG00000019579) #19 NFYC (ENSCPOG00000004966) #21 KCNQ4 (ENSCPOG00000004971) #20 RIMS3 (ENSCPOG00000001581) #22 Hystricomorpha_b ANCESTRAL SPECIES 90 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 Long-tailed chinchilla MODERN SPECIES 244 ZMYND12 (ENSCLAG00000004415) #8 RIMKLA (ENSCLAG00000004183) #9 FOXJ3 (ENSCLAG00000004107) #10 GUCA2A (ENSCLAG00000003499) #11 GUCA2B (ENSCLAG00000003462) #12 HIVEP3 (ENSCLAG00000003048) #13 EDN2 (ENSCLAG00000002304) #14 FOXO6 (ENSCLAG00000002214) #15 ENSCLAG00000002113 SCMH1 (ENSCLAG00000001877) #16 SLFNL1 (ENSCLAG00000001786) #17 CTPS1 (ENSCLAG00000002296) #18 CITED4 (ENSCLAG00000017523) #19 KCNQ4 (ENSCLAG00000002219) #20 NFYC (ENSCLAG00000002100) #21 RIMS3 (ENSCLAG00000001965) #22 EXO5 (ENSCLAG00000001944) #24 ZFP69 (ENSCLAG00000001880) #25 SMAP2 (ENSCLAG00000001816) #27 COL9A2 (ENSCLAG00000004181) #28 ZMPSTE24 (ENSCLAG00000004117) #29 Degu MODERN SPECIES 286 ENSODEG00000001782 FOXJ3 (ENSODEG00000001809) #10 GUCA2A (ENSODEG00000001820) #11 GUCA2B (ENSODEG00000001838) #12 ENSODEG00000018717 HIVEP3 (ENSODEG00000001881) #13 EDN2 (ENSODEG00000001944) #14 FOXO6 (ENSODEG00000001967) #15 ENSODEG00000001970 SCMH1 (ENSODEG00000002007) #16 SLFNL1 (ENSODEG00000002060) #17 ENSODEG00000002074 #18 CITED4 (ENSODEG00000018822) #19 KCNQ4 (ENSODEG00000002096) #20 NFYC (ENSODEG00000002120) #21 RIMS3 (ENSODEG00000002136) #22 EXO5 (ENSODEG00000018788) #24 ZFP69 (ENSODEG00000002197) #25 ENSODEG00000002213 SMAP2 (ENSODEG00000002229) #27 COL9A2 (ENSODEG00000002270) #28 ZMPSTE24 (ENSODEG00000002325) #29 ENSODEG00000002335 Naked mole-rat female MODERN SPECIES 26 RIMKLA (ENSHGLG00000006347) #9 FOXJ3 (ENSHGLG00000003548) #10 ENSHGLG00000045938 GUCA2A (ENSHGLG00000038174) #11 GUCA2B (ENSHGLG00000005936) #12 ENSHGLG00000036409 HIVEP3 (ENSHGLG00000004497) #13 EDN2 (ENSHGLG00000049667) #14 FOXO6 (ENSHGLG00000003494) #15 SCMH1 (ENSHGLG00000010141) #16 ENSHGLG00000007680 #17 ENSHGLG00000019597 #18 CITED4 (ENSHGLG00000013513) #19 KCNQ4 (ENSHGLG00000004543) #20 NFYC (ENSHGLG00000003915) #21 RIMS3 (ENSHGLG00000003243) #22 ZNF684 (ENSHGLG00000039044) #23 EXO5 (ENSHGLG00000016741) #24 SMAP2 (ENSHGLG00000044537) #27 COL9A2 (ENSHGLG00000014385) #28 ZMPSTE24 (ENSHGLG00000047091) #29 TMCO2 (ENSHGLG00000012956) #30 ENSHGLG00000017963 RLF (ENSHGLG00000012491) #31 ENSHGLG00000035541 PPT1 (ENSHGLG00000011635) #32 ENSHGLG00000011409 #33 ENSHGLG00000049961 MFSD2A (ENSHGLG00000010975) #34 MYCL (ENSHGLG00000035021) #35 ENSHGLG00000010308 #37 Sciuridae ANCESTRAL SPECIES 3 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000158790 Marmotini ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT01100000264574 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00960000186932 ENSGT00390000015214 #37 Marmotini_b ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT01100000264574 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00960000186932 ENSGT00390000015214 #37 ENSGT00940000158790 Arctic ground squirrel MODERN SPECIES 565 SCMH1 (ENSUPAG00010013807) #16 SLFNL1 (ENSUPAG00010013801) #17 CTPS1 (ENSUPAG00010013775) #18 CITED4 (ENSUPAG00010013767) #19 KCNQ4 (ENSUPAG00010013707) #20 NFYC (ENSUPAG00010013678) #21 RIMS3 (ENSUPAG00010013653) #22 EXO5 (ENSUPAG00010013644) #24 ZFP69 (ENSUPAG00010013613) #25 ZFP69B (ENSUPAG00010013604) #26 SMAP2 (ENSUPAG00010013595) #27 COL9A2 (ENSUPAG00010013536) #28 ZMPSTE24 (ENSUPAG00010013517) #29 Squirrel MODERN SPECIES 74 PPCS (ENSSTOG00000000111) #7 ZMYND12 (ENSSTOG00000000110) #8 RIMKLA (ENSSTOG00000000109) #9 FOXJ3 (ENSSTOG00000007775) #10 GUCA2A (ENSSTOG00000001891) #11 GUCA2B (ENSSTOG00000027358) #12 HIVEP3 (ENSSTOG00000014879) #13 EDN2 (ENSSTOG00000014874) #14 FOXO6 (ENSSTOG00000026753) #15 SCMH1 (ENSSTOG00000013099) #16 SLFNL1 (ENSSTOG00000027731) #17 CTPS1 (ENSSTOG00000014218) #18 ENSSTOG00000031714 KCNQ4 (ENSSTOG00000001907) #20 NFYC (ENSSTOG00000001900) #21 RIMS3 (ENSSTOG00000001897) #22 EXO5 (ENSSTOG00000007049) #24 ZFP69 (ENSSTOG00000031462) #25 ZFP69B (ENSSTOG00000009229) #26 SMAP2 (ENSSTOG00000005913) #27 COL9A2 (ENSSTOG00000005862) #28 ZMPSTE24 (ENSSTOG00000020016) #29 TMCO2 (ENSSTOG00000004814) #30 ENSSTOG00000022071 #31 ENSSTOG00000033898 #31 PPT1 (ENSSTOG00000005065) #32 CAP1 (ENSSTOG00000022338) #33 MFSD2A (ENSSTOG00000005042) #34 MYCL (ENSSTOG00000005037) #35 ENSSTOG00000034207 TRIT1 (ENSSTOG00000006446) #37 Alpin marmot MODERN SPECIES 15 ZMYND12 (ENSMMMG00000002011) #8 RIMKLA (ENSMMMG00000002028) #9 FOXJ3 (ENSMMMG00000002048) #10 GUCA2A (ENSMMMG00000002105) #11 GUCA2B (ENSMMMG00000002123) #12 ENSMMMG00000002145 ENSMMMG00000002219 HIVEP3 (ENSMMMG00000002224) #13 ENSMMMG00000002239 ENSMMMG00000002251 SCMH1 (ENSMMMG00000002265) #16 SLFNL1 (ENSMMMG00000002309) #17 CTPS1 (ENSMMMG00000002324) #18 KCNQ4 (ENSMMMG00000002357) #20 NFYC (ENSMMMG00000002381) #21 RIMS3 (ENSMMMG00000002414) #22 ZNF684 (ENSMMMG00000002456) #23 EXO5 (ENSMMMG00000002472) #24 ZFP69 (ENSMMMG00000002478) #25 ZFP69B (ENSMMMG00000002528) #26 SMAP2 (ENSMMMG00000002536) #27 ENSMMMG00000002633 #29 TMCO2 (ENSMMMG00000002664) #30 RLF (ENSMMMG00000002678) #31 PPT1 (ENSMMMG00000002699) #32 CAP1 (ENSMMMG00000002734) #33 MFSD2A (ENSMMMG00000002807) #34 MYCL (ENSMMMG00000002838) #35 ENSMMMG00000002850 TRIT1 (ENSMMMG00000002859) #37 PPIE (ENSMMMG00000002879) Eurasian red squirrel MODERN SPECIES RIMKLA (ENSSVLG00005010382) #9 FOXJ3 (ENSSVLG00005010205) #10 GUCA2A (ENSSVLG00005010160) #11 GUCA2B (ENSSVLG00005010132) #12 ENSSVLG00005010108 HIVEP3 (ENSSVLG00005010057) #13 EDN2 (ENSSVLG00005010001) #14 FOXO6 (ENSSVLG00005009973) #15 ENSSVLG00005009957 SCMH1 (ENSSVLG00005009674) #16 SLFNL1 (ENSSVLG00005009581) #17 CTPS1 (ENSSVLG00005009515) #18 CITED4 (ENSSVLG00005009499) #19 KCNQ4 (ENSSVLG00005009333) #20 NFYC (ENSSVLG00005009237) #21 RIMS3 (ENSSVLG00005009202) #22 ENSSVLG00005009174 ENSSVLG00005009149 EXO5 (ENSSVLG00005009138) #24 ZFP69 (ENSSVLG00005009085) #25 ZFP69B (ENSSVLG00005009014) #26 SMAP2 (ENSSVLG00005008838) #27 COL9A2 (ENSSVLG00005008637) #28 ZMPSTE24 (ENSSVLG00005008594) #29 TMCO2 (ENSSVLG00005007276) #30 RLF (ENSSVLG00005007220) #31 PPT1 (ENSSVLG00005007110) #32 ENSSVLG00005007032 #33 MFSD2A (ENSSVLG00005006874) #34 MYCL (ENSSVLG00005006832) #35 TRIT1 (ENSSVLG00005006559) #37 Lagomorpha ANCESTRAL SPECIES 8 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272 ENSGT00940000154788 Rabbit MODERN SPECIES 4 ZMYND12 (ENSOCUG00000012139) #8 RIMKLA (ENSOCUG00000014732) #9 FOXJ3 (ENSOCUG00000011647) #10 GUCA2A (ENSOCUG00000011644) #11 ENSOCUG00000011637 #12 ENSOCUG00000034241 HIVEP3 (ENSOCUG00000001203) #13 ENSOCUG00000001201 #14 SCMH1 (ENSOCUG00000004703) #16 SLFNL1 (ENSOCUG00000004701) #17 CTPS1 (ENSOCUG00000016294) #18 ENSOCUG00000032431 CITED4 (ENSOCUG00000015927) #19 KCNQ4 (ENSOCUG00000015852) #20 NFYC (ENSOCUG00000025540) #21 RIMS3 (ENSOCUG00000014068) #22 ENSOCUG00000030737 #23 EXO5 (ENSOCUG00000016005) #24 ZFP69 (ENSOCUG00000016000) #25 SMAP2 (ENSOCUG00000015858) #27 COL9A2 (ENSOCUG00000015838) #28 ZMPSTE24 (ENSOCUG00000015825) #29 TMCO2 (ENSOCUG00000017275) #30 RLF (ENSOCUG00000017263) #31 PPT1 (ENSOCUG00000012796) #32 ENSOCUG00000012790 #33 MFSD2A (ENSOCUG00000001028) #34 MYCL (ENSOCUG00000025113) #35 TRIT1 (ENSOCUG00000002054) #37 ENSOCUG00000007677 ENSOCUG00000031949 Pika MODERN SPECIES 4075 ENSOPRG00000013074 NFYC (ENSOPRG00000013034) #21 RIMS3 (ENSOPRG00000013024) #22 Primates ANCESTRAL SPECIES 4 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00390000009130.a.b Strepsirrhini ANCESTRAL SPECIES ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272 Lemuriformes ANCESTRAL SPECIES ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362.e #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272 Lemuriformes_a ANCESTRAL SPECIES 72 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362.e #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000154788 Greater bamboo lemur MODERN SPECIES 1057 RIMS3 (ENSPSMG00000012677) #22 ZNF684 (ENSPSMG00000012698) #23 EXO5 (ENSPSMG00000012705) #24 ZFP69 (ENSPSMG00000012721) #25 ZFP69B (ENSPSMG00000012729) #26 SMAP2 (ENSPSMG00000012789) #27 COL9A2 (ENSPSMG00000012883) #28 ZMPSTE24 (ENSPSMG00000012906) #29 TMCO2 (ENSPSMG00000012917) #30 RLF (ENSPSMG00000012932) #31 Coquerels sifaka MODERN SPECIES 357 PPCS (ENSPCOG00000014596) #7 ZMYND12 (ENSPCOG00000024191) #8 RIMKLA (ENSPCOG00000023531) #9 FOXJ3 (ENSPCOG00000024504) #10 GUCA2A (ENSPCOG00000021933) #11 GUCA2B (ENSPCOG00000022939) #12 HIVEP3 (ENSPCOG00000005141) #13 EDN2 (ENSPCOG00000017654) #14 FOXO6 (ENSPCOG00000014648) #15 SCMH1 (ENSPCOG00000018767) #16 ENSPCOG00000028276 SLFNL1 (ENSPCOG00000016977) #17 CTPS1 (ENSPCOG00000028340) #18 KCNQ4 (ENSPCOG00000021204) #20 NFYC (ENSPCOG00000021083) #21 RIMS3 (ENSPCOG00000028045) #22 ZNF684 (ENSPCOG00000026540) #23 ZFP69 (ENSPCOG00000028710) #25 ZFP69B (ENSPCOG00000017570) #26 SMAP2 (ENSPCOG00000026437) #27 COL9A2 (ENSPCOG00000022937) #28 ZMPSTE24 (ENSPCOG00000016460) #29 TMCO2 (ENSPCOG00000009437) #30 RLF (ENSPCOG00000027247) #31 PPT1 (ENSPCOG00000010059) #32 CAP1 (ENSPCOG00000009880) #33 MFSD2A (ENSPCOG00000013582) #34 MYCL (ENSPCOG00000021177) #35 TRIT1 (ENSPCOG00000014150) #37 PABPC4 (ENSPCOG00000023725) HEYL (ENSPCOG00000000827) Mouse lemur MODERN SPECIES 11 LAPTM5 (ENSMICG00000011554) SDC3 (ENSMICG00000034678) ENSMICG00000007713 NKAIN1 (ENSMICG00000009329) ENSMICG00000046183 ENSMICG00000009336 HIVEP3 (ENSMICG00000037990) #13 EDN2 (ENSMICG00000042709) #14 FOXO6 (ENSMICG00000032013) #15 SCMH1 (ENSMICG00000012377) #16 SLFNL1 (ENSMICG00000012368) #17 CTPS1 (ENSMICG00000014626) #18 ENSMICG00000029716 KCNQ4 (ENSMICG00000046630) #20 NFYC (ENSMICG00000004285) #21 RIMS3 (ENSMICG00000004270) #22 ZNF684 (ENSMICG00000044852) #23 ZFP69 (ENSMICG00000007201) #25 ZFP69B (ENSMICG00000042001) #26 SMAP2 (ENSMICG00000015504) #27 COL9A2 (ENSMICG00000009969) #28 ZMPSTE24 (ENSMICG00000000308) #29 TMCO2 (ENSMICG00000014156) #30 RLF (ENSMICG00000000307) #31 ENSMICG00000000250 #32 CAP1 (ENSMICG00000000248) #33 MFSD2A (ENSMICG00000016306) #34 MYCL (ENSMICG00000030328) #35 TRIT1 (ENSMICG00000016294) #37 ENSMICG00000034577 ENSMICG00000016676 Bushbaby MODERN SPECIES 259 PPCS (ENSOGAG00000031647) #7 ZMYND12 (ENSOGAG00000014919) #8 RIMKLA (ENSOGAG00000000458) #9 FOXJ3 (ENSOGAG00000008237) #10 GUCA2A (ENSOGAG00000006397) #11 GUCA2B (ENSOGAG00000008235) #12 HIVEP3 (ENSOGAG00000028118) #13 EDN2 (ENSOGAG00000009888) #14 FOXO6 (ENSOGAG00000028037) #15 SCMH1 (ENSOGAG00000015403) #16 SLFNL1 (ENSOGAG00000007001) #17 ENSOGAG00000015398 #18 CITED4 (ENSOGAG00000024517) #19 KCNQ4 (ENSOGAG00000012616) #20 NFYC (ENSOGAG00000012614) #21 RIMS3 (ENSOGAG00000006117) #22 ENSOGAG00000014249 #23 ZFP69 (ENSOGAG00000009257) #25 ZFP69B (ENSOGAG00000009114) #26 SMAP2 (ENSOGAG00000009115) #27 COL9A2 (ENSOGAG00000010159) #28 ZMPSTE24 (ENSOGAG00000008841) #29 TMCO2 (ENSOGAG00000002767) #30 RLF (ENSOGAG00000002764) #31 PPT1 (ENSOGAG00000005495) #32 CAP1 (ENSOGAG00000005492) #33 MFSD2A (ENSOGAG00000005489) #34 MYCL (ENSOGAG00000015380) #35 TRIT1 (ENSOGAG00000009571) #37 ENSOGAG00000025082 PPIE (ENSOGAG00000003620) Haplorrhini ANCESTRAL SPECIES 1 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000158790 Tarsier MODERN SPECIES 5760 SCMH1 (ENSTSYG00000001330) #16 SLFNL1 (ENSTSYG00000036523) #17 CTPS1 (ENSTSYG00000006382) #18 KCNQ4 (ENSTSYG00000007641) #20 NFYC (ENSTSYG00000013921) #21 RIMS3 (ENSTSYG00000025855) #22 ZNF684 (ENSTSYG00000033869) #23 ZFP69 (ENSTSYG00000000786) #25 ZFP69B (ENSTSYG00000010669) #26 SMAP2 (ENSTSYG00000006253) #27 COL9A2 (ENSTSYG00000014000) #28 ZMPSTE24 (ENSTSYG00000012315) #29 TMCO2 (ENSTSYG00000013510) #30 RLF (ENSTSYG00000027682) #31 Simiiformes ANCESTRAL SPECIES 3 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00390000009130.a.b Catarrhini ANCESTRAL SPECIES 3 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00390000009130.a.b Hominoidea ANCESTRAL SPECIES 3 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s.a #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000158790 Hominidae ANCESTRAL SPECIES 3 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s.a #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000158790 Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s.a #33 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.b.b.a ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00970000194001 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s.a #33 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.b.b.a ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Pan ANCESTRAL SPECIES ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s.a #33 ENSGT00940000153095.g.b.a.a.a.b.b.a.a.b.b.a ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Bonobo MODERN SPECIES PPIH (ENSPPAG00000034314) CCDC30 (ENSPPAG00000032892) PPCS (ENSPPAG00000039580) #7 ZMYND12 (ENSPPAG00000036047) #8 RIMKLA (ENSPPAG00000033011) #9 FOXJ3 (ENSPPAG00000034767) #10 GUCA2A (ENSPPAG00000029342) #11 GUCA2B (ENSPPAG00000035738) #12 HIVEP3 (ENSPPAG00000037073) #13 EDN2 (ENSPPAG00000039030) #14 SCMH1 (ENSPPAG00000042517) #16 SLFNL1 (ENSPPAG00000030810) #17 CTPS1 (ENSPPAG00000028405) #18 KCNQ4 (ENSPPAG00000041138) #20 ENSPPAG00000032067 #21 RIMS3 (ENSPPAG00000040113) #22 ZNF684 (ENSPPAG00000030066) #23 ZFP69 (ENSPPAG00000028849) #25 ZFP69B (ENSPPAG00000040903) #26 SMAP2 (ENSPPAG00000033555) #27 COL9A2 (ENSPPAG00000042613) #28 ZMPSTE24 (ENSPPAG00000034912) #29 TMCO2 (ENSPPAG00000028744) #30 RLF (ENSPPAG00000032318) #31 PPT1 (ENSPPAG00000040559) #32 CAP1 (ENSPPAG00000033903) #33 MFSD2A (ENSPPAG00000037970) #34 MYCL (ENSPPAG00000029651) #35 TRIT1 (ENSPPAG00000023930) #37 ENSPPAG00000008285 PPIE (ENSPPAG00000042403) Chimpanzee MODERN SPECIES PPCS (ENSPTRG00000030660) #7 ZMYND12 (ENSPTRG00000000608) #8 RIMKLA (ENSPTRG00000000607) #9 FOXJ3 (ENSPTRG00000000606) #10 GUCA2A (ENSPTRG00000023425) #11 GUCA2B (ENSPTRG00000000604) #12 HIVEP3 (ENSPTRG00000000603) #13 EDN2 (ENSPTRG00000000602) #14 FOXO6 (ENSPTRG00000047442) #15 SCMH1 (ENSPTRG00000000601) #16 SLFNL1 (ENSPTRG00000000600) #17 CTPS1 (ENSPTRG00000000599) #18 CITED4 (ENSPTRG00000000598) #19 KCNQ4 (ENSPTRG00000000597) #20 NFYC (ENSPTRG00000000596) #21 RIMS3 (ENSPTRG00000000594) #22 ZNF684 (ENSPTRG00000000593) #23 EXO5 (ENSPTRG00000000592) #24 ZFP69 (ENSPTRG00000000591) #25 ZFP69B (ENSPTRG00000000590) #26 SMAP2 (ENSPTRG00000000589) #27 COL9A2 (ENSPTRG00000044977) #28 ZMPSTE24 (ENSPTRG00000000587) #29 TMCO2 (ENSPTRG00000000586) #30 RLF (ENSPTRG00000000585) #31 PPT1 (ENSPTRG00000000584) #32 CAP1 (ENSPTRG00000000583) #33 ENSPTRG00000046517 MFSD2A (ENSPTRG00000000581) #34 MYCL (ENSPTRG00000000580) #35 TRIT1 (ENSPTRG00000000579) #37 Human MODERN SPECIES ZMYND12 (ENSG00000066185) #8 RIMKLA (ENSG00000177181) #9 FOXJ3 (ENSG00000198815) #10 GUCA2A (ENSG00000197273) #11 GUCA2B (ENSG00000044012) #12 ENSG00000284895 HIVEP3 (ENSG00000127124) #13 EDN2 (ENSG00000127129) #14 FOXO6 (ENSG00000204060) #15 SCMH1 (ENSG00000010803) #16 SLFNL1 (ENSG00000171790) #17 CTPS1 (ENSG00000171793) #18 CITED4 (ENSG00000179862) #19 KCNQ4 (ENSG00000117013) #20 NFYC (ENSG00000066136) #21 RIMS3 (ENSG00000117016) #22 ZNF684 (ENSG00000117010) #23 EXO5 (ENSG00000164002) #24 ZFP69 (ENSG00000187815) #25 ZFP69B (ENSG00000187801) #26 SMAP2 (ENSG00000084070) #27 COL9A2 (ENSG00000049089) #28 ZMPSTE24 (ENSG00000084073) #29 TMCO2 (ENSG00000188800) #30 RLF (ENSG00000117000) #31 PPT1 (ENSG00000131238) #32 CAP1 (ENSG00000131236) #33 MFSD2A (ENSG00000168389) #34 MYCL (ENSG00000116990) #35 TRIT1 (ENSG00000043514) #37 OXCT2 (ENSG00000198754) Gorilla MODERN SPECIES CCDC30 (ENSGGOG00000004124) PPCS (ENSGGOG00000026253) #7 ZMYND12 (ENSGGOG00000004654) #8 RIMKLA (ENSGGOG00000025939) #9 FOXJ3 (ENSGGOG00000013618) #10 GUCA2A (ENSGGOG00000011516) #11 GUCA2B (ENSGGOG00000011520) #12 HIVEP3 (ENSGGOG00000016974) #13 EDN2 (ENSGGOG00000016971) #14 FOXO6 (ENSGGOG00000026271) #15 SCMH1 (ENSGGOG00000017190) #16 SLFNL1 (ENSGGOG00000017189) #17 CTPS1 (ENSGGOG00000017188) #18 KCNQ4 (ENSGGOG00000007364) #20 ENSGGOG00000007360 #21 RIMS3 (ENSGGOG00000009986) #22 ZNF684 (ENSGGOG00000022914) #23 EXO5 (ENSGGOG00000024174) #24 ZFP69 (ENSGGOG00000006972) #25 ZFP69B (ENSGGOG00000039613) #26 SMAP2 (ENSGGOG00000004018) #27 COL9A2 (ENSGGOG00000002596) #28 ZMPSTE24 (ENSGGOG00000002591) #29 TMCO2 (ENSGGOG00000015048) #30 RLF (ENSGGOG00000015221) #31 PPT1 (ENSGGOG00000025819) #32 CAP1 (ENSGGOG00000027527) #33 ENSGGOG00000023672 MFSD2A (ENSGGOG00000015275) #34 MYCL (ENSGGOG00000001693) #35 TRIT1 (ENSGGOG00000010070) #37 Orangutan MODERN SPECIES ZMYND12 (ENSPPYG00000001470) #8 RIMKLA (ENSPPYG00000001471) #9 FOXJ3 (ENSPPYG00000001472) #10 ENSPPYG00000001473 #11 GUCA2B (ENSPPYG00000001474) #12 ENSPPYG00000035846 HIVEP3 (ENSPPYG00000001475) #13 EDN2 (ENSPPYG00000001476) #14 FOXO6 (ENSPPYG00000037126) #15 SCMH1 (ENSPPYG00000001478) #16 SLFNL1 (ENSPPYG00000001479) #17 CTPS1 (ENSPPYG00000001480) #18 CITED4 (ENSPPYG00000001481) #19 KCNQ4 (ENSPPYG00000001482) #20 NFYC (ENSPPYG00000001483) #21 RIMS3 (ENSPPYG00000001485) #22 ZNF684 (ENSPPYG00000001486) #23 EXO5 (ENSPPYG00000001487) #24 ENSPPYG00000035572 ZFP69 (ENSPPYG00000001488) #25 ZFP69B (ENSPPYG00000001489) #26 SMAP2 (ENSPPYG00000001490) #27 COL9A2 (ENSPPYG00000001491) #28 ZMPSTE24 (ENSPPYG00000001492) #29 TMCO2 (ENSPPYG00000001493) #30 RLF (ENSPPYG00000001494) #31 PPT1 (ENSPPYG00000030814) #32 CAP1 (ENSPPYG00000001496) #33 ENSPPYG00000001497 #34 MYCL (ENSPPYG00000032517) #35 TRIT1 (ENSPPYG00000001499) #37 Gibbon MODERN SPECIES 2 PPIH (ENSNLEG00000012313) ENSNLEG00000012311 PPCS (ENSNLEG00000012303) #7 ZMYND12 (ENSNLEG00000012297) #8 RIMKLA (ENSNLEG00000012292) #9 FOXJ3 (ENSNLEG00000012288) #10 ENSNLEG00000012285 #11 GUCA2B (ENSNLEG00000012283) #12 HIVEP3 (ENSNLEG00000012279) #13 EDN2 (ENSNLEG00000012277) #14 SCMH1 (ENSNLEG00000012259) #16 SLFNL1 (ENSNLEG00000012253) #17 CTPS1 (ENSNLEG00000012214) #18 ENSNLEG00000012210 #20 ENSNLEG00000012195 #21 RIMS3 (ENSNLEG00000012190) #22 ZNF684 (ENSNLEG00000012187) #23 EXO5 (ENSNLEG00000028361) #24 ZFP69 (ENSNLEG00000012184) #25 ZFP69B (ENSNLEG00000034783) #26 SMAP2 (ENSNLEG00000032450) #27 COL9A2 (ENSNLEG00000012137) #28 ZMPSTE24 (ENSNLEG00000012132) #29 TMCO2 (ENSNLEG00000012130) #30 RLF (ENSNLEG00000012124) #31 PPT1 (ENSNLEG00000012121) #32 CAP1 (ENSNLEG00000012077) #33 ENSNLEG00000012076 ENSNLEG00000012066 #34 MYCL (ENSNLEG00000012063) #35 TRIT1 (ENSNLEG00000012038) #37 Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT00940000159332 #22 ENSGT00550000074801.h.c.b.a.a ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Rhinopithecus ANCESTRAL SPECIES 76 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00440000034918.q.a.a.a.d.l.a.a ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT00940000159332 #22 ENSGT00550000074801.h.c.b.a.a ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s #33 ENSGT00390000005318.b.b.b #34 ENSGT00550000076451.a.a.b ENSGT00940000158613 #35 Golden snub-nosed monkey MODERN SPECIES 2906 ENSRROG00000030433 HIVEP3 (ENSRROG00000030766) #13 EDN2 (ENSRROG00000031866) #14 FOXO6 (ENSRROG00000040824) #15 SCMH1 (ENSRROG00000043549) #16 SLFNL1 (ENSRROG00000041337) #17 CTPS1 (ENSRROG00000039545) #18 KCNQ4 (ENSRROG00000037203) #20 NFYC (ENSRROG00000044562) #21 RIMS3 (ENSRROG00000044320) #22 ZNF684 (ENSRROG00000032375) #23 EXO5 (ENSRROG00000003374) #24 ZFP69 (ENSRROG00000001028) #25 ZFP69B (ENSRROG00000035064) #26 SMAP2 (ENSRROG00000044815) #27 COL9A2 (ENSRROG00000001908) #28 ZMPSTE24 (ENSRROG00000029334) #29 TMCO2 (ENSRROG00000041961) #30 RLF (ENSRROG00000028839) #31 PPT1 (ENSRROG00000019913) #32 CAP1 (ENSRROG00000037313) #33 MFSD2A (ENSRROG00000045774) #34 ENSRROG00000042951 MYCL (ENSRROG00000039181) #35 TRIT1 (ENSRROG00000042670) #37 Black snub-nosed monkey MODERN SPECIES 443 PPCS (ENSRBIG00000031175) #7 ZMYND12 (ENSRBIG00000028691) #8 RIMKLA (ENSRBIG00000038553) #9 FOXJ3 (ENSRBIG00000029803) #10 GUCA2A (ENSRBIG00000005852) #11 GUCA2B (ENSRBIG00000016693) #12 HIVEP3 (ENSRBIG00000032985) #13 EDN2 (ENSRBIG00000039469) #14 FOXO6 (ENSRBIG00000026900) #15 SCMH1 (ENSRBIG00000027552) #16 SLFNL1 (ENSRBIG00000034653) #17 CTPS1 (ENSRBIG00000036114) #18 ENSRBIG00000023115 KCNQ4 (ENSRBIG00000041469) #20 NFYC (ENSRBIG00000042960) #21 RIMS3 (ENSRBIG00000031605) #22 ENSRBIG00000038649 ZNF684 (ENSRBIG00000040446) #23 ZFP69 (ENSRBIG00000031369) #25 ZFP69B (ENSRBIG00000033501) #26 SMAP2 (ENSRBIG00000031486) #27 COL9A2 (ENSRBIG00000030760) #28 ZMPSTE24 (ENSRBIG00000021858) #29 TMCO2 (ENSRBIG00000037974) #30 RLF (ENSRBIG00000036531) #31 PPT1 (ENSRBIG00000035690) #32 CAP1 (ENSRBIG00000028175) #33 MFSD2A (ENSRBIG00000027966) #34 ENSRBIG00000039892 MYCL (ENSRBIG00000043373) #35 TRIT1 (ENSRBIG00000043179) #37 Cercopithecinae ANCESTRAL SPECIES ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT00940000159332 #22 ENSGT00550000074801.h.c.b.a.a ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Vervet Monkey MODERN SPECIES 12 PPCS (ENSCSAG00000001165) #7 ZMYND12 (ENSCSAG00000001164) #8 RIMKLA (ENSCSAG00000001163) #9 FOXJ3 (ENSCSAG00000001162) #10 GUCA2A (ENSCSAG00000001161) #11 GUCA2B (ENSCSAG00000001160) #12 HIVEP3 (ENSCSAG00000001159) #13 EDN2 (ENSCSAG00000001158) #14 FOXO6 (ENSCSAG00000001157) #15 SCMH1 (ENSCSAG00000001156) #16 SLFNL1 (ENSCSAG00000001155) #17 CTPS1 (ENSCSAG00000001154) #18 CITED4 (ENSCSAG00000000138) #19 KCNQ4 (ENSCSAG00000001153) #20 NFYC (ENSCSAG00000001152) #21 RIMS3 (ENSCSAG00000001151) #22 ZNF684 (ENSCSAG00000001150) #23 EXO5 (ENSCSAG00000000137) #24 ZFP69 (ENSCSAG00000001149) #25 ZFP69B (ENSCSAG00000001148) #26 SMAP2 (ENSCSAG00000001147) #27 COL9A2 (ENSCSAG00000001146) #28 ZMPSTE24 (ENSCSAG00000001145) #29 TMCO2 (ENSCSAG00000001144) #30 RLF (ENSCSAG00000001143) #31 ENSCSAG00000001142 PPT1 (ENSCSAG00000001141) #32 CAP1 (ENSCSAG00000001140) #33 MFSD2A (ENSCSAG00000001139) #34 MYCL (ENSCSAG00000001138) #35 TRIT1 (ENSCSAG00000001137) #37 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00940000171057 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT00940000159332 #22 ENSGT00550000074801.h.c.b.a.a ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Macaca ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00940000171057 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272.`c.a Pig-tailed macaque MODERN SPECIES 217 PPCS (ENSMNEG00000040668) #7 ZMYND12 (ENSMNEG00000045144) #8 ENSMNEG00000043181 RIMKLA (ENSMNEG00000038583) #9 FOXJ3 (ENSMNEG00000035486) #10 GUCA2A (ENSMNEG00000030506) #11 GUCA2B (ENSMNEG00000043147) #12 HIVEP3 (ENSMNEG00000023810) #13 EDN2 (ENSMNEG00000036928) #14 FOXO6 (ENSMNEG00000044561) #15 SCMH1 (ENSMNEG00000010607) #16 SLFNL1 (ENSMNEG00000034423) #17 CTPS1 (ENSMNEG00000044044) #18 KCNQ4 (ENSMNEG00000018935) #20 NFYC (ENSMNEG00000027645) #21 RIMS3 (ENSMNEG00000034822) #22 ZNF684 (ENSMNEG00000044680) #23 EXO5 (ENSMNEG00000008813) #24 ZFP69 (ENSMNEG00000036561) #25 ZFP69B (ENSMNEG00000017249) #26 SMAP2 (ENSMNEG00000032255) #27 COL9A2 (ENSMNEG00000043170) #28 ZMPSTE24 (ENSMNEG00000038045) #29 TMCO2 (ENSMNEG00000034686) #30 RLF (ENSMNEG00000043618) #31 PPT1 (ENSMNEG00000036176) #32 CAP1 (ENSMNEG00000036964) #33 MFSD2A (ENSMNEG00000028513) #34 MYCL (ENSMNEG00000032787) #35 TRIT1 (ENSMNEG00000023137) #37 ENSMNEG00000034094 Macaca_a ANCESTRAL SPECIES ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT01090000260213.a.a.a.b.a.a.a ENSGT00440000034918.q.a.a.a.d.l.a.a ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT01030000238095.b ENSGT00940000159332 #22 ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.b.b.a.a.d ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s #33 ENSGT00390000005318.b.b.b #34 ENSGT01100000263493.a.a.a.b.b.b.b.a.a.a.a.a.b ENSGT00940000158613 #35 ENSGT01100000263493.a.a.a.b.a.a.a.a.a.a.b.a.a Rhesus MODERN SPECIES GUCA2A (ENSMMUG00000055703) #11 GUCA2B (ENSMMUG00000018965) #12 ENSMMUG00000052537 ENSMMUG00000049561 ENSMMUG00000052393 HIVEP3 (ENSMMUG00000016215) #13 EDN2 (ENSMMUG00000016214) #14 FOXO6 (ENSMMUG00000044175) #15 SCMH1 (ENSMMUG00000017104) #16 SLFNL1 (ENSMMUG00000017103) #17 CTPS1 (ENSMMUG00000017101) #18 ENSMMUG00000055760 CITED4 (ENSMMUG00000043675) #19 KCNQ4 (ENSMMUG00000019536) #20 NFYC (ENSMMUG00000014970) #21 RIMS3 (ENSMMUG00000039139) #22 ENSMMUG00000059358 ENSMMUG00000056255 ENSMMUG00000050602 ZNF684 (ENSMMUG00000009234) #23 EXO5 (ENSMMUG00000020398) #24 ZFP69B (ENSMMUG00000005836) #26 ENSMMUG00000057845 SMAP2 (ENSMMUG00000013839) #27 COL9A2 (ENSMMUG00000018664) #28 ZMPSTE24 (ENSMMUG00000005992) #29 TMCO2 (ENSMMUG00000052510) #30 RLF (ENSMMUG00000032180) #31 PPT1 (ENSMMUG00000009189) #32 CAP1 (ENSMMUG00000009188) #33 MFSD2A (ENSMMUG00000011264) #34 Crab-eating macaque MODERN SPECIES RIMKLA (ENSMFAG00000044165) #9 FOXJ3 (ENSMFAG00000034559) #10 GUCA2A (ENSMFAG00000031471) #11 GUCA2B (ENSMFAG00000038173) #12 HIVEP3 (ENSMFAG00000041340) #13 EDN2 (ENSMFAG00000036352) #14 FOXO6 (ENSMFAG00000032820) #15 SCMH1 (ENSMFAG00000036779) #16 SLFNL1 (ENSMFAG00000041721) #17 CTPS1 (ENSMFAG00000039379) #18 ENSMFAG00000058098 ENSMFAG00000028126 KCNQ4 (ENSMFAG00000034264) #20 NFYC (ENSMFAG00000033858) #21 ENSMFAG00000058580 RIMS3 (ENSMFAG00000036770) #22 ENSMFAG00000054328 ENSMFAG00000050468 ZNF684 (ENSMFAG00000000321) #23 EXO5 (ENSMFAG00000008984) #24 ZFP69 (ENSMFAG00000038294) #25 SMAP2 (ENSMFAG00000044100) #27 COL9A2 (ENSMFAG00000028569) #28 ZMPSTE24 (ENSMFAG00000044167) #29 ENSMFAG00000053876 TMCO2 (ENSMFAG00000038683) #30 RLF (ENSMFAG00000001299) #31 PPT1 (ENSMFAG00000029038) #32 CAP1 (ENSMFAG00000036663) #33 MFSD2A (ENSMFAG00000003330) #34 ENSMFAG00000058771 Cercopithecinae_b ANCESTRAL SPECIES 1 ENSGT00390000004248 #8 ENSGT00940000171057 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT00940000159332 #22 ENSGT00550000074801.h.c.b.a.a ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Olive baboon MODERN SPECIES RIMKLA (ENSPANG00000009482) #9 FOXJ3 (ENSPANG00000004657) #10 GUCA2A (ENSPANG00000008252) #11 GUCA2B (ENSPANG00000006448) #12 ENSPANG00000038401 ENSPANG00000049139 HIVEP3 (ENSPANG00000010311) #13 EDN2 (ENSPANG00000000436) #14 FOXO6 (ENSPANG00000000435) #15 SCMH1 (ENSPANG00000025516) #16 SLFNL1 (ENSPANG00000005801) #17 CTPS1 (ENSPANG00000006392) #18 CITED4 (ENSPANG00000008319) #19 KCNQ4 (ENSPANG00000006225) #20 NFYC (ENSPANG00000026473) #21 RIMS3 (ENSPANG00000010023) #22 ZNF684 (ENSPANG00000018123) #23 EXO5 (ENSPANG00000032341) #24 ZFP69 (ENSPANG00000048994) #25 ZFP69B (ENSPANG00000018450) #26 COL9A2 (ENSPANG00000007011) #28 ZMPSTE24 (ENSPANG00000007506) #29 TMCO2 (ENSPANG00000006394) #30 RLF (ENSPANG00000018124) #31 PPT1 (ENSPANG00000017273) #32 CAP1 (ENSPANG00000006452) #33 MFSD2A (ENSPANG00000011715) #34 MYCL (ENSPANG00000042839) #35 TRIT1 (ENSPANG00000018125) #37 ENSPANG00000010056 PPIE (ENSPANG00000000575) Cercopithecinae_d ANCESTRAL SPECIES 1 ENSGT00390000004248 #8 ENSGT00940000171057 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00440000034918.q.a.a.a.d.l.a.a ENSGT00940000159209 #20 ENSGT00940000155689.c #21 ENSGT00940000159332 #22 ENSGT00550000074801.h.c.b.a.a ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.s #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Drill MODERN SPECIES 672 CTPS1 (ENSMLEG00000036132) #18 KCNQ4 (ENSMLEG00000032111) #20 NFYC (ENSMLEG00000038570) #21 RIMS3 (ENSMLEG00000042796) #22 ENSMLEG00000041734 ZNF684 (ENSMLEG00000035552) #23 EXO5 (ENSMLEG00000001570) #24 ZFP69 (ENSMLEG00000042959) #25 ZFP69B (ENSMLEG00000014259) #26 SMAP2 (ENSMLEG00000032355) #27 COL9A2 (ENSMLEG00000035440) #28 ZMPSTE24 (ENSMLEG00000037696) #29 TMCO2 (ENSMLEG00000034301) #30 RLF (ENSMLEG00000040465) #31 ENSMLEG00000043746 #32 CAP1 (ENSMLEG00000044449) #33 MFSD2A (ENSMLEG00000040826) #34 MYCL (ENSMLEG00000017162) #35 TRIT1 (ENSMLEG00000035296) #37 Sooty mangabey MODERN SPECIES 227 RIMKLA (ENSCATG00000036202) #9 ENSCATG00000033575 ENSCATG00000003873 FOXJ3 (ENSCATG00000033279) #10 GUCA2A (ENSCATG00000031405) #11 GUCA2B (ENSCATG00000035261) #12 HIVEP3 (ENSCATG00000032016) #13 EDN2 (ENSCATG00000033771) #14 FOXO6 (ENSCATG00000028336) #15 SCMH1 (ENSCATG00000036607) #16 SLFNL1 (ENSCATG00000037639) #17 CTPS1 (ENSCATG00000033018) #18 ENSCATG00000030649 KCNQ4 (ENSCATG00000038249) #20 NFYC (ENSCATG00000032882) #21 RIMS3 (ENSCATG00000017445) #22 ZNF684 (ENSCATG00000032130) #23 EXO5 (ENSCATG00000003100) #24 ZFP69 (ENSCATG00000030938) #25 ZFP69B (ENSCATG00000032477) #26 SMAP2 (ENSCATG00000039372) #27 COL9A2 (ENSCATG00000032540) #28 ZMPSTE24 (ENSCATG00000043666) #29 TMCO2 (ENSCATG00000044427) #30 RLF (ENSCATG00000032206) #31 PPT1 (ENSCATG00000035844) #32 ENSCATG00000035987 #33 MFSD2A (ENSCATG00000032272) #34 MYCL (ENSCATG00000033384) #35 TRIT1 (ENSCATG00000034344) #37 ENSCATG00000037613 Platyrrhini ANCESTRAL SPECIES ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00390000018052.l.d ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00390000009724.l.s.b.a.b ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b.a #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099.g #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387.a #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.q.a #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272.yb Mas night monkey MODERN SPECIES 604 TAL2 (ENSANAG00000005973) FKTN (ENSANAG00000031912) FSD1L (ENSANAG00000026736) ENSANAG00000020796 SLC44A1 (ENSANAG00000027494) ENSANAG00000019975 ABCA1 (ENSANAG00000033387) NIPSNAP3B (ENSANAG00000024274) ENSANAG00000019822 ENSANAG00000026565 SMC2 (ENSANAG00000030051) ENSANAG00000037167 CITED4 (ENSANAG00000036146) #19 KCNQ4 (ENSANAG00000021072) #20 NFYC (ENSANAG00000020951) #21 RIMS3 (ENSANAG00000029140) #22 ENSANAG00000020223 #23 ZFP69 (ENSANAG00000027896) #25 ZFP69B (ENSANAG00000033029) #26 SMAP2 (ENSANAG00000035291) #27 COL9A2 (ENSANAG00000036329) #28 ZMPSTE24 (ENSANAG00000027026) #29 TMCO2 (ENSANAG00000033235) #30 RLF (ENSANAG00000031894) #31 PPT1 (ENSANAG00000026377) #32 ENSANAG00000036880 #33 MFSD2A (ENSANAG00000034076) #34 MYCL (ENSANAG00000035601) #35 TRIT1 (ENSANAG00000030732) #37 ENSANAG00000026668 PPIE (ENSANAG00000033595) Cebidae ANCESTRAL SPECIES 1 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00390000018052.l.d ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00390000009724.l.s.b.a.b ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b.a #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099.g #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387.a #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.q.a #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272.xb Cebidae_a ANCESTRAL SPECIES ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00390000018052.l.d ENSGT00950000183053.A #14 ENSGT00940000161401 #15 ENSGT00390000009724.l.s.b.a.b ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b.a #18 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099.g #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387.a #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c.q.a #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272.xb Capuchin MODERN SPECIES 136 RIMKLA (ENSCCAG00000026125) #9 FOXJ3 (ENSCCAG00000034037) #10 GUCA2A (ENSCCAG00000023104) #11 GUCA2B (ENSCCAG00000013307) #12 HIVEP3 (ENSCCAG00000035138) #13 ENSCCAG00000037840 EDN2 (ENSCCAG00000001490) #14 FOXO6 (ENSCCAG00000037266) #15 ENSCCAG00000026064 SCMH1 (ENSCCAG00000027670) #16 ENSCCAG00000024381 SLFNL1 (ENSCCAG00000032677) #17 CTPS1 (ENSCCAG00000028834) #18 KCNQ4 (ENSCCAG00000027664) #20 NFYC (ENSCCAG00000023851) #21 RIMS3 (ENSCCAG00000023914) #22 Bolivian squirrel monkey MODERN SPECIES 130 PPCS (ENSSBOG00000019543) #7 ZMYND12 (ENSSBOG00000022821) #8 RIMKLA (ENSSBOG00000028222) #9 FOXJ3 (ENSSBOG00000019519) #10 GUCA2A (ENSSBOG00000026034) #11 GUCA2B (ENSSBOG00000028955) #12 HIVEP3 (ENSSBOG00000030565) #13 ENSSBOG00000032423 EDN2 (ENSSBOG00000032818) #14 FOXO6 (ENSSBOG00000022251) #15 SCMH1 (ENSSBOG00000018650) #16 SLFNL1 (ENSSBOG00000034600) #17 CTPS1 (ENSSBOG00000020990) #18 KCNQ4 (ENSSBOG00000028751) #20 NFYC (ENSSBOG00000023269) #21 RIMS3 (ENSSBOG00000013055) #22 ENSSBOG00000036155 #23 EXO5 (ENSSBOG00000009084) #24 ZFP69 (ENSSBOG00000021129) #25 ZFP69B (ENSSBOG00000029619) #26 SMAP2 (ENSSBOG00000002291) #27 ENSSBOG00000034698 ZMPSTE24 (ENSSBOG00000026426) #29 TMCO2 (ENSSBOG00000036191) #30 RLF (ENSSBOG00000004728) #31 PPT1 (ENSSBOG00000031697) #32 ENSSBOG00000023387 #33 MFSD2A (ENSSBOG00000034208) #34 MYCL (ENSSBOG00000031434) #35 TRIT1 (ENSSBOG00000024417) #37 PPIE (ENSSBOG00000035061) Marmoset MODERN SPECIES 19 ENSCJAG00000003121 #7 ZMYND12 (ENSCJAG00000003111) #8 RIMKLA (ENSCJAG00000003106) #9 FOXJ3 (ENSCJAG00000003088) #10 GUCA2A (ENSCJAG00000003087) #11 GUCA2B (ENSCJAG00000040403) #12 ENSCJAG00000075145 HIVEP3 (ENSCJAG00000015848) #13 ENSCJAG00000003074 #14 FOXO6 (ENSCJAG00000047939) #15 SCMH1 (ENSCJAG00000003039) #16 CTPS1 (ENSCJAG00000003003) #18 CITED4 (ENSCJAG00000046475) #19 KCNQ4 (ENSCJAG00000002997) #20 NFYC (ENSCJAG00000002987) #21 RIMS3 (ENSCJAG00000002973) #22 ZNF684 (ENSCJAG00000002965) #23 EXO5 (ENSCJAG00000002961) #24 ZFP69 (ENSCJAG00000062374) #25 ZFP69B (ENSCJAG00000002952) #26 SMAP2 (ENSCJAG00000002908) #27 COL9A2 (ENSCJAG00000002851) #28 ENSCJAG00000075493 ZMPSTE24 (ENSCJAG00000002833) #29 TMCO2 (ENSCJAG00000002830) #30 RLF (ENSCJAG00000042605) #31 PPT1 (ENSCJAG00000002798) #32 CAP1 (ENSCJAG00000002738) #33 MFSD2A (ENSCJAG00000002712) #34 MYCL (ENSCJAG00000002700) #35 TRIT1 (ENSCJAG00000002620) #37 Atlantogenata ANCESTRAL SPECIES 11 ENSGT00390000000654 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272 Afrotheria ANCESTRAL SPECIES 42 ENSGT00940000167024 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272 Afrotheria_a ANCESTRAL SPECIES 42 ENSGT00390000000654 ENSGT00950000182834.C #7 ENSGT00390000004248 #8 ENSGT00390000014577.b #9 ENSGT00940000160362 #10 ENSGT00940000154436.a #11 ENSGT00940000154436.b #12 ENSGT00940000157218.C #13 ENSGT00950000183053.A #14 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00530000063624.C #19 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 ENSGT00940000155272 Elephant MODERN SPECIES 332 ENSLAFG00000032280 PPCS (ENSLAFG00000009743) #7 ZMYND12 (ENSLAFG00000016574) #8 RIMKLA (ENSLAFG00000016566) #9 FOXJ3 (ENSLAFG00000017663) #10 GUCA2A (ENSLAFG00000007514) #11 GUCA2B (ENSLAFG00000007516) #12 HIVEP3 (ENSLAFG00000017582) #13 EDN2 (ENSLAFG00000016624) #14 ENSLAFG00000013310 #16 ENSLAFG00000013306 #17 ENSLAFG00000025893 #18 CITED4 (ENSLAFG00000031244) #19 NFYC (ENSLAFG00000001223) #21 KCNQ4 (ENSLAFG00000023336) #20 RIMS3 (ENSLAFG00000010340) #22 EXO5 (ENSLAFG00000011024) #24 ZFP69B (ENSLAFG00000011022) #26 SMAP2 (ENSLAFG00000008783) #27 COL9A2 (ENSLAFG00000004588) #28 ZMPSTE24 (ENSLAFG00000015734) #29 TMCO2 (ENSLAFG00000015728) #30 RLF (ENSLAFG00000015722) #31 PPT1 (ENSLAFG00000022663) #32 CAP1 (ENSLAFG00000005592) #33 MFSD2A (ENSLAFG00000003074) #34 ENSLAFG00000001935 #35 TRIT1 (ENSLAFG00000016876) #37 ENSLAFG00000031581 ENSLAFG00000008493 HPCAL4 (ENSLAFG00000012324) Hyrax MODERN SPECIES 1428 RIMS3 (ENSPCAG00000002558) #22 Tenrec MODERN SPECIES 1770 RIMS3 (ENSETEG00000013340) #22 Xenarthra ANCESTRAL SPECIES 150 ENSGT00940000157999 #16 ENSGT00410000025651.B #17 ENSGT00910000144179.b.b #18 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000163099 #23 ENSGT00390000015205 #24 ENSGT00940000162278 #25 ENSGT00940000163434 #26 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214 #37 Armadillo MODERN SPECIES 767 ENSDNOG00000004123 SCMH1 (ENSDNOG00000011593) #16 SLFNL1 (ENSDNOG00000011580) #17 CTPS1 (ENSDNOG00000000880) #18 KCNQ4 (ENSDNOG00000035081) #20 NFYC (ENSDNOG00000045603) #21 ENSDNOG00000045744 RIMS3 (ENSDNOG00000033940) #22 ZNF684 (ENSDNOG00000032206) #23 EXO5 (ENSDNOG00000042481) #24 ZFP69 (ENSDNOG00000007479) #25 ZFP69B (ENSDNOG00000017460) #26 SMAP2 (ENSDNOG00000007914) #27 COL9A2 (ENSDNOG00000043096) #28 ZMPSTE24 (ENSDNOG00000038575) #29 TMCO2 (ENSDNOG00000045954) #30 RLF (ENSDNOG00000035279) #31 PPT1 (ENSDNOG00000005527) #32 ENSDNOG00000016869 #33 MFSD2A (ENSDNOG00000014078) #34 MYCL (ENSDNOG00000001996) #35 TRIT1 (ENSDNOG00000001994) #37 ENSDNOG00000044541 Sloth MODERN SPECIES 1595 ENSCHOG00000006294 #22 Marsupialia ANCESTRAL SPECIES 10 ENSGT00940000161946 ENSGT00500000044870.b ENSGT00940000158303 ENSGT01050000244950.a.b ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214.w #37 ENSGT00940000178388 ENSGT00390000015159.a.a ENSGT00940000161166 ENSGT00390000017767.b.b ENSGT00940000161351 Opossum MODERN SPECIES 3 ENSMODG00000017474 EIF3I (ENSMODG00000017481) TMEM234 (ENSMODG00000017483) CCDC28B (ENSMODG00000017487) TXLNA (ENSMODG00000017491) KPNA6 (ENSMODG00000017528) ENSMODG00000017545 ENSMODG00000017551 PTP4A2 (ENSMODG00000017554) ENSMODG00000017556 ENSMODG00000040929 PEF1 (ENSMODG00000017573) TINAGL1 (ENSMODG00000028729) KCNQ4 (ENSMODG00000017582) #20 NFYC (ENSMODG00000017585) #21 RIMS3 (ENSMODG00000017587) #22 SMAP2 (ENSMODG00000017597) #27 COL9A2 (ENSMODG00000017617) #28 ZMPSTE24 (ENSMODG00000017624) #29 ENSMODG00000017626 #30 RLF (ENSMODG00000017631) #31 PPT1 (ENSMODG00000017638) #32 CAP1 (ENSMODG00000017643) #33 MFSD2A (ENSMODG00000017646) #34 ENSMODG00000017647 #35 TRIT1 (ENSMODG00000041050) #37 ENSMODG00000017650 ENSMODG00000017652 ENSMODG00000017653 PABPC4 (ENSMODG00000017657) PPIE (ENSMODG00000017659) Marsupialia_b ANCESTRAL SPECIES 4 ENSGT00940000161946 ENSGT00500000044870.b ENSGT00940000158303 ENSGT01050000244950.a.b ENSGT00390000018895.b.c ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214.x #37 ENSGT00390000015214.w #37 ENSGT00390000015159.a.a ENSGT00940000161166 ENSGT00390000017767.b.b ENSGT00940000161351 Diprotodontia ANCESTRAL SPECIES 3 ENSGT00940000161946 ENSGT00500000044870.b ENSGT00940000158303 ENSGT01050000244950.a.b ENSGT00390000018895.b.c ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214.x #37 ENSGT00390000015214.w #37 ENSGT00390000015159.a.a ENSGT00940000161166 ENSGT00390000017767.b.b ENSGT00940000161351 Diprotodontia_a ANCESTRAL SPECIES 4 ENSGT00940000161946 ENSGT00500000044870.b ENSGT00940000158303 ENSGT01050000244950.a.b ENSGT00390000018895.b.c ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722.k ENSGT00940000160023 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00390000002053 #29 ENSGT00390000001528 #30 ENSGT00950000183034.B #31 ENSGT00940000156790 #32 ENSGT00390000017955.c #33 ENSGT00390000005318.b.b.b #34 ENSGT00940000158613 #35 ENSGT00390000015214.x #37 ENSGT00390000015214.w #37 ENSGT00390000015159.a.a ENSGT00940000161166 ENSGT00390000017767.b.b ENSGT00940000161351 Common wonbat MODERN SPECIES 1014 ENSVURG00010000587 DCDC2B (ENSVURG00010000597) CCDC28B (ENSVURG00010000609) TXLNA (ENSVURG00010000627) KPNA6 (ENSVURG00010000696) TMEM39B (ENSVURG00010000747) KHDRBS1 (ENSVURG00010000790) PTP4A2 (ENSVURG00010000845) ADGRB2 (ENSVURG00010000920) ENSVURG00010001545 ENSVURG00010001579 ENSVURG00010001594 TINAGL1 (ENSVURG00010001605) KCNQ4 (ENSVURG00010001636) #20 NFYC (ENSVURG00010001799) #21 RIMS3 (ENSVURG00010001849) #22 SMAP2 (ENSVURG00010001866) #27 COL9A2 (ENSVURG00010001881) #28 ZMPSTE24 (ENSVURG00010001947) #29 ENSVURG00010001972 #30 RLF (ENSVURG00010001989) #31 PPT1 (ENSVURG00010002003) #32 CAP1 (ENSVURG00010002032) #33 MFSD2A (ENSVURG00010002108) #34 MYCL (ENSVURG00010002118) #35 ENSVURG00010002124 #37 ENSVURG00010002142 #37 ENSVURG00010002167 NT5C1A (ENSVURG00010002203) HEYL (ENSVURG00010002224) PABPC4 (ENSVURG00010002229) koala MODERN SPECIES 14 CCDC28B (ENSPCIG00000009089) TXLNA (ENSPCIG00000022346) KPNA6 (ENSPCIG00000022336) TMEM39B (ENSPCIG00000022331) KHDRBS1 (ENSPCIG00000022322) ENSPCIG00000035788 ENSPCIG00000020626 PTP4A2 (ENSPCIG00000020627) ENSPCIG00000020630 ADGRB2 (ENSPCIG00000020843) ENSPCIG00000036838 ENSPCIG00000020642 TINAGL1 (ENSPCIG00000020646) KCNQ4 (ENSPCIG00000014308) #20 NFYC (ENSPCIG00000020649) #21 RIMS3 (ENSPCIG00000020652) #22 SMAP2 (ENSPCIG00000020653) #27 ZMPSTE24 (ENSPCIG00000020656) #29 ENSPCIG00000020658 #30 RLF (ENSPCIG00000032935) #31 ENSPCIG00000020660 PPT1 (ENSPCIG00000020661) #32 CAP1 (ENSPCIG00000020662) #33 MFSD2A (ENSPCIG00000020664) #34 MYCL (ENSPCIG00000020665) #35 TRIT1 (ENSPCIG00000020666) #37 ENSPCIG00000020667 ENSPCIG00000020669 NT5C1A (ENSPCIG00000020671) HEYL (ENSPCIG00000032718) PABPC4 (ENSPCIG00000020674) Wallaby MODERN SPECIES 456 RIMS3 (ENSMEUG00000003194) #22 Tasmanian devil MODERN SPECIES 2 EIF3I (ENSSHAG00000008273) TMEM234 (ENSSHAG00000026722) DCDC2B (ENSSHAG00000020621) TXLNA (ENSSHAG00000007944) KPNA6 (ENSSHAG00000007561) TMEM39B (ENSSHAG00000031062) KHDRBS1 (ENSSHAG00000007106) PTP4A2 (ENSSHAG00000024595) ENSSHAG00000003434 ADGRB2 (ENSSHAG00000011480) COL16A1 (ENSSHAG00000010645) ENSSHAG00000010460 ENSSHAG00000028220 ENSSHAG00000009630 #20 NFYC (ENSSHAG00000009190) #21 RIMS3 (ENSSHAG00000032120) #22 SMAP2 (ENSSHAG00000007665) #27 ENSSHAG00000007143 ZMPSTE24 (ENSSHAG00000006392) #29 RLF (ENSSHAG00000005088) #31 PPT1 (ENSSHAG00000002339) #32 CAP1 (ENSSHAG00000001626) #33 ENSSHAG00000004229 #34 ENSSHAG00000018449 #35 ENSSHAG00000022663 #37 ENSSHAG00000027288 #37 ENSSHAG00000018329 ENSSHAG00000031508 NT5C1A (ENSSHAG00000018265) HEYL (ENSSHAG00000018213) PABPC4 (ENSSHAG00000018139) Platypus MODERN SPECIES 7 EIF3I (ENSOANG00000001198) TMEM234 (ENSOANG00000009739) CCDC28B (ENSOANG00000003835) TXLNA (ENSOANG00000003837) KPNA6 (ENSOANG00000003840) TMEM39B (ENSOANG00000039493) KHDRBS1 (ENSOANG00000050922) PTP4A2 (ENSOANG00000012358) ADGRB2 (ENSOANG00000012360) ENSOANG00000049077 PEF1 (ENSOANG00000012363) HCRTR1 (ENSOANG00000012365) TINAGL1 (ENSOANG00000012366) KCNQ4 (ENSOANG00000011432) #20 NFYC (ENSOANG00000012367) #21 RIMS3 (ENSOANG00000021495) #22 SMAP2 (ENSOANG00000012369) #27 CSMD2 (ENSOANG00000003228) ENSOANG00000003227 GJB5 (ENSOANG00000010965) GJB4 (ENSOANG00000010967) ENSOANG00000016018 GJB3 (ENSOANG00000010968) GJA4 (ENSOANG00000040460) SMIM12 (ENSOANG00000003225) DLGAP3 (ENSOANG00000049434) ENSOANG00000040800 TMEM35B (ENSOANG00000038316) SFPQ (ENSOANG00000047356) ZMYM4 (ENSOANG00000010569) ENSOANG00000049345 Sauria ANCESTRAL SPECIES 23 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00960000189425 ENSGT00940000159768 ENSGT00940000166312.b.a ENSGT00940000164318 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 Archelosauria ANCESTRAL SPECIES 25 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00960000189425 ENSGT00940000159768 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 Archosauria ANCESTRAL SPECIES 22 ENSGT00940000161163 ENSGT01100000263935 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00960000189425 ENSGT00940000159768 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 Aves ANCESTRAL SPECIES 28 ENSGT00940000161163 ENSGT01100000263935 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00960000189425 ENSGT00940000159768 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 Neognathae ANCESTRAL SPECIES 26 ENSGT00940000161163 ENSGT01100000263935 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00960000189425 ENSGT00940000159768 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 Neognathae_b ANCESTRAL SPECIES 26 ENSGT01100000263935 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000161782.e.a ENSGT00980000198702 ENSGT00940000161782.e.b ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00960000189425 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 Neognathae_c ANCESTRAL SPECIES 31 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000161782.e.a ENSGT00980000198702 ENSGT00940000161782.e.b ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00960000189425 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT01050000245043 Golden eagle MODERN SPECIES 7 LCK (ENSACCG00020008348) HDAC1 (ENSACCG00020008276) MARCKSL1 (ENSACCG00020008256) TMEM39B (ENSACCG00020008240) KHDRBS1 (ENSACCG00020008220) PTP4A2 (ENSACCG00020008200) ENSACCG00020008190 ENSACCG00020008178 ADGRB2 (ENSACCG00020008113) COL16A1 (ENSACCG00020008041) ENSACCG00020008001 PEF1 (ENSACCG00020007988) TINAGL1 (ENSACCG00020007969) KCNQ4 (ENSACCG00020007954) #20 NFYC (ENSACCG00020007931) #21 RIMS3 (ENSACCG00020007916) #22 SMAP2 (ENSACCG00020007896) #27 ENSACCG00020007879 CSMD2 (ENSACCG00020007812) GJB5 (ENSACCG00020007750) GJB3 (ENSACCG00020007742) GJA4 (ENSACCG00020007736) SMIM12 (ENSACCG00020007729) DLGAP3 (ENSACCG00020007714) ENSACCG00020007702 TMEM35B (ENSACCG00020007691) ENSACCG00020007676 ZMYM4 (ENSACCG00020007551) ENSACCG00020007509 ENSACCG00020007498 KIAA0319L (ENSACCG00020007466) Kakapo MODERN SPECIES 6 EIF3I (ENSSHBG00005016641) FAM167B (ENSSHBG00005016634) LCK (ENSSHBG00005016619) HDAC1 (ENSSHBG00005016601) MARCKSL1 (ENSSHBG00005016589) TMEM39B (ENSSHBG00005016581) KHDRBS1 (ENSSHBG00005016567) PTP4A2 (ENSSHBG00005016560) ENSSHBG00005016041 PEF1 (ENSSHBG00005016033) ENSSHBG00005016027 TINAGL1 (ENSSHBG00005016018) ENSSHBG00005016008 KCNQ4 (ENSSHBG00005016005) #20 NFYC (ENSSHBG00005016002) #21 RIMS3 (ENSSHBG00005015998) #22 SMAP2 (ENSSHBG00005015995) #27 COL9A2 (ENSSHBG00005015987) #28 ENSSHBG00005015978 CSMD2 (ENSSHBG00005011776) ENSSHBG00005011094 ENSSHBG00005011073 GJB5 (ENSSHBG00005011053) ENSSHBG00005011038 GJB3 (ENSSHBG00005011026) GJA4 (ENSSHBG00005011010) SMIM12 (ENSSHBG00005010996) DLGAP3 (ENSSHBG00005010972) ENSSHBG00005010935 TMEM35B (ENSSHBG00005010910) SFPQ (ENSSHBG00005010847) Passeriformes ANCESTRAL SPECIES 23 ENSGT01100000263935 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000161782.e.a ENSGT00940000161782.e.b ENSGT00940000155722 ENSGT00940000160023.c ENSGT00940000160023.d ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000155018 Passeriformes_d ANCESTRAL SPECIES 23 ENSGT00940000159693 ENSGT00940000161163 ENSGT01100000263935 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000161782.e.a ENSGT00940000161782.e.b ENSGT00940000155722 ENSGT00940000160023.c ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000155018 Flycatcher MODERN SPECIES 15 ENSFALG00000000618 ENSFALG00000024042 ENSFALG00000028235 LCK (ENSFALG00000024666) ENSFALG00000025151 TMEM39B (ENSFALG00000000638) PTP4A2 (ENSFALG00000000644) ENSFALG00000000636 ADGRB2 (ENSFALG00000000648) PEF1 (ENSFALG00000000651) ENSFALG00000022917 ENSFALG00000026866 ENSFALG00000023277 KCNQ4 (ENSFALG00000025872) #20 NFYC (ENSFALG00000000660) #21 RIMS3 (ENSFALG00000000664) #22 ENSFALG00000026455 ENSFALG00000025313 SMAP2 (ENSFALG00000028119) #27 CSMD2 (ENSFALG00000000698) ENSFALG00000025538 GJB5 (ENSFALG00000024416) ENSFALG00000014259 GJB3 (ENSFALG00000026077) GJA4 (ENSFALG00000014269) ENSFALG00000014271 DLGAP3 (ENSFALG00000000726) ENSFALG00000026305 TMEM35B (ENSFALG00000026074) SFPQ (ENSFALG00000000731) ZMYM4 (ENSFALG00000000734) Passeriformes_g ANCESTRAL SPECIES 22 ENSGT00940000159693 ENSGT00940000161163 ENSGT01100000263935 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000161782.e.a ENSGT00940000161782.f ENSGT00940000155722 ENSGT00940000160023.c ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000157613 Medium ground finch MODERN SPECIES 181 ENSGFOG00000001912 ENSGFOG00000001876 ENSGFOG00000013533 PEF1 (ENSGFOG00000013532) TINAGL1 (ENSGFOG00000013531) KCNQ4 (ENSGFOG00000013527) #20 NFYC (ENSGFOG00000013525) #21 RIMS3 (ENSGFOG00000013523) #22 SMAP2 (ENSGFOG00000013521) #27 COL9A2 (ENSGFOG00000013515) #28 CSMD2 (ENSGFOG00000013474) GJB5 (ENSGFOG00000013453) ENSGFOG00000013452 GJB3 (ENSGFOG00000013451) GJA4 (ENSGFOG00000013450) SMIM12 (ENSGFOG00000013446) DLGAP3 (ENSGFOG00000013443) ENSGFOG00000013438 TMEM35B (ENSGFOG00000013433) SFPQ (ENSGFOG00000013419) ZMYM4 (ENSGFOG00000013027) KIAA0319L (ENSGFOG00000012978) NCDN (ENSGFOG00000012974) Passeroidea ANCESTRAL SPECIES 22 ENSGT00940000161163 ENSGT01100000263935 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000161782.e.a ENSGT00940000161782.e.b ENSGT00940000155722 ENSGT00940000160023.c ENSGT00940000165345 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000157613 Zebra finch MODERN SPECIES 16 ENSTGUG00000023120 HDAC1 (ENSTGUG00000001420) MARCKSL1 (ENSTGUG00000027588) TMEM39B (ENSTGUG00000001431) KHDRBS1 (ENSTGUG00000017346) PTP4A2 (ENSTGUG00000025992) ENSTGUG00000028214 ADGRB2 (ENSTGUG00000021130) ENSTGUG00000027049 ENSTGUG00000023619 PEF1 (ENSTGUG00000020347) TINAGL1 (ENSTGUG00000026271) ENSTGUG00000017337 KCNQ4 (ENSTGUG00000021494) #20 NFYC (ENSTGUG00000017336) #21 RIMS3 (ENSTGUG00000025961) #22 SMAP2 (ENSTGUG00000017332) #27 COL9A2 (ENSTGUG00000021444) #28 CSMD2 (ENSTGUG00000001744) ENSTGUG00000027655 GJB5 (ENSTGUG00000024360) ENSTGUG00000018960 GJB3 (ENSTGUG00000001742) GJA4 (ENSTGUG00000021611) SMIM12 (ENSTGUG00000029111) DLGAP3 (ENSTGUG00000001734) ENSTGUG00000025466 TMEM35B (ENSTGUG00000001682) SFPQ (ENSTGUG00000001722) ZMYM4 (ENSTGUG00000001709) KIAA0319L (ENSTGUG00000001687) Common canary MODERN SPECIES 49 PEF1 (ENSSCAG00000015691) KCNQ4 (ENSSCAG00000015686) #20 NFYC (ENSSCAG00000015681) #21 RIMS3 (ENSSCAG00000015677) #22 ENSSCAG00000015675 #27 ENSSCAG00000015673 CSMD2 (ENSSCAG00000015618) ENSSCAG00000015548 GJB5 (ENSSCAG00000015545) ENSSCAG00000015544 GJB3 (ENSSCAG00000015541) GJA4 (ENSSCAG00000015540) DLGAP3 (ENSSCAG00000015534) ENSSCAG00000015529 TMEM35B (ENSSCAG00000015528) SFPQ (ENSSCAG00000015523) ZMYM4 (ENSSCAG00000015467) ENSSCAG00000015439 KIAA0319L (ENSSCAG00000015436) Great tit MODERN SPECIES 15 EIF3I (ENSPMJG00000006092) ENSPMJG00000006096 FAM167B (ENSPMJG00000006098) LCK (ENSPMJG00000006099) ENSPMJG00000006100 HDAC1 (ENSPMJG00000006101) MARCKSL1 (ENSPMJG00000006104) TMEM39B (ENSPMJG00000006108) KHDRBS1 (ENSPMJG00000006109) PTP4A2 (ENSPMJG00000006115) ADGRB2 (ENSPMJG00000006121) PEF1 (ENSPMJG00000006263) TINAGL1 (ENSPMJG00000006264) ENSPMJG00000006277 NFYC (ENSPMJG00000006280) #21 RIMS3 (ENSPMJG00000006284) #22 SMAP2 (ENSPMJG00000006289) #27 COL9A2 (ENSPMJG00000006298) #28 CSMD2 (ENSPMJG00000006321) GJB5 (ENSPMJG00000006613) GJB3 (ENSPMJG00000006615) ENSPMJG00000006616 GJA4 (ENSPMJG00000006617) SMIM12 (ENSPMJG00000006618) DLGAP3 (ENSPMJG00000006622) ENSPMJG00000006630 TMEM35B (ENSPMJG00000006631) SFPQ (ENSPMJG00000006633) ZMYM4 (ENSPMJG00000006638) ENSPMJG00000006658 KIAA0319L (ENSPMJG00000006673) Galloanserae ANCESTRAL SPECIES 25 ENSGT00940000161163 ENSGT01100000263935 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103.b ENSGT00940000160103.a ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00960000189425 ENSGT00940000159768 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 Anatidae ANCESTRAL SPECIES 21 ENSGT00940000159693 ENSGT00940000161163 ENSGT01100000263935 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103.a ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768 ENSGT00940000169330 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000159550 ENSGT01030000238234 ENSGT00940000157613 Pink-footed goose MODERN SPECIES 73 FAM167B (ENSABRG00000020392) LCK (ENSABRG00000020397) ENSABRG00000020402 HDAC1 (ENSABRG00000020407) MARCKSL1 (ENSABRG00000020411) TMEM39B (ENSABRG00000020417) KHDRBS1 (ENSABRG00000020429) PTP4A2 (ENSABRG00000020435) ADGRB2 (ENSABRG00000020446) ENSABRG00000020456 PEF1 (ENSABRG00000020465) ENSABRG00000020481 ENSABRG00000020492 KCNQ4 (ENSABRG00000020506) #20 NFYC (ENSABRG00000020515) #21 RIMS3 (ENSABRG00000020522) #22 SMAP2 (ENSABRG00000020532) #27 COL9A2 (ENSABRG00000020553) #28 CSMD2 (ENSABRG00000020619) ENSABRG00000020795 ENSABRG00000020799 GJB5 (ENSABRG00000020800) ENSABRG00000020801 GJB3 (ENSABRG00000020802) GJA4 (ENSABRG00000020803) SMIM12 (ENSABRG00000020804) DLGAP3 (ENSABRG00000020807) ENSABRG00000020820 TMEM35B (ENSABRG00000020823) ENSABRG00000020825 ZMYM4 (ENSABRG00000020832) Duck MODERN SPECIES 15 ENSAPLG00000013425 DCDC2B (ENSAPLG00000002043) EIF3I (ENSAPLG00000013429) ENSAPLG00000013832 FAM167B (ENSAPLG00000026613) LCK (ENSAPLG00000013851) HDAC1 (ENSAPLG00000014752) MARCKSL1 (ENSAPLG00000025946) TMEM39B (ENSAPLG00000006828) PTP4A2 (ENSAPLG00000030704) KHDRBS1 (ENSAPLG00000006587) ENSAPLG00000022989 ADGRB2 (ENSAPLG00000029913) COL16A1 (ENSAPLG00000024730) NFYC (ENSAPLG00000002519) #21 RIMS3 (ENSAPLG00000003119) #22 SMAP2 (ENSAPLG00000003192) #27 COL9A2 (ENSAPLG00000003493) #28 CSMD2 (ENSAPLG00000004505) ENSAPLG00000001785 GJB5 (ENSAPLG00000001783) GJB3 (ENSAPLG00000001770) GJA4 (ENSAPLG00000001756) SMIM12 (ENSAPLG00000001748) DLGAP3 (ENSAPLG00000003910) ENSAPLG00000016724 TMEM35B (ENSAPLG00000017324) ENSAPLG00000003643 ZMYM4 (ENSAPLG00000002899) ENSAPLG00000018446 KIAA0319L (ENSAPLG00000009379) Phasianidae ANCESTRAL SPECIES 24 ENSGT00940000161371 ENSGT00940000163547 ENSGT00940000159693 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103.b ENSGT00940000161782 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00960000189425 ENSGT00940000159768 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 Japanese quail MODERN SPECIES 15 CCDC28B (ENSCJPG00005000622) ENSCJPG00005000621 EIF3I (ENSCJPG00005000616) ENSCJPG00005000612 FAM167B (ENSCJPG00005000608) LCK (ENSCJPG00005000601) HDAC1 (ENSCJPG00005000595) MARCKSL1 (ENSCJPG00005000589) TMEM39B (ENSCJPG00005000584) KHDRBS1 (ENSCJPG00005000574) PTP4A2 (ENSCJPG00005000567) PEF1 (ENSCJPG00005017280) TINAGL1 (ENSCJPG00005017279) KCNQ4 (ENSCJPG00005017277) #20 NFYC (ENSCJPG00005017275) #21 RIMS3 (ENSCJPG00005017274) #22 SMAP2 (ENSCJPG00005017273) #27 CSMD2 (ENSCJPG00005017144) ENSCJPG00005017112 ENSCJPG00005017109 GJB5 (ENSCJPG00005017108) ENSCJPG00005017107 GJB3 (ENSCJPG00005017106) GJA4 (ENSCJPG00005017105) SMIM12 (ENSCJPG00005017103) DLGAP3 (ENSCJPG00005017102) ENSCJPG00005017101 TMEM35B (ENSCJPG00005017100) SFPQ (ENSCJPG00005017099) ZMYM4 (ENSCJPG00005017094) ENSCJPG00005017090 Phasianidae_b ANCESTRAL SPECIES 23 ENSGT00940000161371 ENSGT00940000163547 ENSGT00940000159693 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103.b ENSGT00940000161782 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000017672 ENSGT00940000161290 #28 ENSGT00960000189425 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 Turkey MODERN SPECIES 22 ENSMGAG00000018021 ENSMGAG00000019967 ENSMGAG00000020110 ENSMGAG00000011842 ENSMGAG00000011846 OSGIN2 (ENSMGAG00000011864) CALB1 (ENSMGAG00000011897) ENSMGAG00000011884 ENSMGAG00000011871 TMEM64 (ENSMGAG00000011915) ENSMGAG00000011916 PIP4P2 (ENSMGAG00000011928) ENSMGAG00000011941 ENSMGAG00000011937 ENSMGAG00000021460 ENSMGAG00000017557 #22 ENSMGAG00000001064 ENSMGAG00000011695 ENSMGAG00000018665 ENSMGAG00000011697 ENSMGAG00000011702 ENSMGAG00000017998 ENSMGAG00000021845 ENSMGAG00000011714 ENSMGAG00000021996 ENSMGAG00000011729 ENSMGAG00000018508 ENSMGAG00000018449 ENSMGAG00000017533 ENSMGAG00000019280 ENSMGAG00000022567 Chicken MODERN SPECIES 15 TMEM234 (ENSGALG00010017465) FAM167B (ENSGALG00010017459) MTMR9LP (ENSGALG00010017454) LCK (ENSGALG00010017442) HDAC1 (ENSGALG00010017415) MARCKSL1 (ENSGALG00010017380) TMEM39B (ENSGALG00010017347) KHDRBS1 (ENSGALG00010017322) PTP4A2 (ENSGALG00010017312) ADGRB2 (ENSGALG00010017289) COL16A1 (ENSGALG00010017250) PEF1 (ENSGALG00010017226) TINAGL1 (ENSGALG00010017212) KCNQ4 (ENSGALG00010017200) #20 NFYC (ENSGALG00010017183) #21 RIMS3 (ENSGALG00010017176) #22 SMAP2 (ENSGALG00010017167) #27 COL9A2 (ENSGALG00010017139) #28 ENSGALG00010017123 C1orf94 (ENSGALG00010017117) CSMD2 (ENSGALG00010017101) GJB5 (ENSGALG00010017020) ENSGALG00010017835 GJB3 (ENSGALG00010016960) GJA4 (ENSGALG00010016953) DLGAP3 (ENSGALG00010013936) ENSGALG00010013922 ENSGALG00010013915 SFPQ (ENSGALG00010013890) ZMYM4 (ENSGALG00010013880) IFI27L2 (ENSGALG00010013837) African ostrich MODERN SPECIES 289 RIMS3 (ENSSCUG00000001698) #22 SMAP2 (ENSSCUG00000001696) #27 ENSSCUG00000001691 #28 ENSSCUG00000001683 CSMD2 (ENSSCUG00000001641) ENSSCUG00000001602 GJB5 (ENSSCUG00000001601) GJB3 (ENSSCUG00000001599) GJA4 (ENSSCUG00000001597) ENSSCUG00000001596 Australian saltwater crocodile MODERN SPECIES 57 FAM167B (ENSCPRG00005002181) LCK (ENSCPRG00005001689) ENSCPRG00005001664 HDAC1 (ENSCPRG00005001656) MARCKSL1 (ENSCPRG00005001653) TMEM39B (ENSCPRG00005001596) KHDRBS1 (ENSCPRG00005001572) ENSCPRG00005001561 ENSCPRG00005001557 ADGRB2 (ENSCPRG00005001497) ENSCPRG00005001469 PEF1 (ENSCPRG00005001461) TINAGL1 (ENSCPRG00005001455) KCNQ4 (ENSCPRG00005001423) #20 NFYC (ENSCPRG00005001412) #21 RIMS3 (ENSCPRG00005001406) #22 SMAP2 (ENSCPRG00005001395) #27 ENSCPRG00005001379 CSMD2 (ENSCPRG00005000414) C1orf94 (ENSCPRG00005000245) GJB5 (ENSCPRG00005000230) GJB4 (ENSCPRG00005000227) ENSCPRG00005000221 GJB3 (ENSCPRG00005000203) GJA4 (ENSCPRG00005000195) SMIM12 (ENSCPRG00005000185) DLGAP3 (ENSCPRG00005000178) ENSCPRG00005000152 TMEM35B (ENSCPRG00005000149) SFPQ (ENSCPRG00005000143) ZMYM4 (ENSCPRG00005000067) Cryptodira ANCESTRAL SPECIES 31 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911 ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000156221 ENSGT00940000159550 ENSGT00940000165614 ENSGT00940000155018 Testudinoidea ANCESTRAL SPECIES 27 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00980000198702 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768.q ENSGT00940000166312.b.a ENSGT00940000159768.p ENSGT00390000017672 ENSGT01030000234911.a.b ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911.a.a ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911.b ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513.c Testudinidae ANCESTRAL SPECIES 4 ENSGT00940000159693 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00950000182891.a.a.b.a.a.a.b ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768.q ENSGT00940000166312.b.a ENSGT00960000189425 ENSGT00940000164318 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911.b ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513.c ENSGT01100000263536.A.b Abingdon island giant tortoise MODERN SPECIES 2222 ADGRB2 (ENSCABG00000008163) COL16A1 (ENSCABG00000008608) ENSCABG00000008612 PEF1 (ENSCABG00000008613) TINAGL1 (ENSCABG00000008624) KCNQ4 (ENSCABG00000008644) #20 NFYC (ENSCABG00000008660) #21 RIMS3 (ENSCABG00000008663) #22 SMAP2 (ENSCABG00000008666) #27 CSMD2 (ENSCABG00000008675) ENSCABG00000008684 C1orf94 (ENSCABG00000008687) ENSCABG00000008691 GJB4 (ENSCABG00000008693) ENSCABG00000008694 GJB3 (ENSCABG00000008695) GJA4 (ENSCABG00000008696) SMIM12 (ENSCABG00000008698) ENSCABG00000008702 ENSCABG00000008953 TMEM35B (ENSCABG00000008960) SFPQ (ENSCABG00000008964) Goode s thornscrub tortoise MODERN SPECIES 12 ENSGEVG00005009555 FAM167B (ENSGEVG00005009478) LCK (ENSGEVG00005009421) HDAC1 (ENSGEVG00005009366) MARCKSL1 (ENSGEVG00005009332) TMEM39B (ENSGEVG00005009286) KHDRBS1 (ENSGEVG00005009253) PTP4A2 (ENSGEVG00005009190) ENSGEVG00005009090 ADGRB2 (ENSGEVG00005008263) ENSGEVG00005008088 PEF1 (ENSGEVG00005008067) TINAGL1 (ENSGEVG00005007849) KCNQ4 (ENSGEVG00005007711) #20 NFYC (ENSGEVG00005007556) #21 RIMS3 (ENSGEVG00005007502) #22 SMAP2 (ENSGEVG00005007481) #27 COL9A2 (ENSGEVG00005007395) #28 ENSGEVG00005007340 ENSGEVG00005007311 ENSGEVG00005007285 ENSGEVG00005007265 ENSGEVG00005007225 C1orf94 (ENSGEVG00005007160) GJB5 (ENSGEVG00005007121) GJB4 (ENSGEVG00005007098) ENSGEVG00005007080 GJB3 (ENSGEVG00005007051) GJA4 (ENSGEVG00005007033) SMIM12 (ENSGEVG00005007018) DLGAP3 (ENSGEVG00005006644) Emydidae ANCESTRAL SPECIES 39 ENSGT00940000159693 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00980000198702 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768.p ENSGT00390000017672 ENSGT01030000234911.a.b ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911.a.a ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234911.b ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513.c ENSGT01100000263536.A.b ENSGT00940000154325.b painted turtle MODERN SPECIES 6 NPHP4 (ENSCPBG00000019380) KCNAB2 (ENSCPBG00000019373) CHD5 (ENSCPBG00000019363) ENSCPBG00000019359 RNF207 (ENSCPBG00000019352) PTP4A2 (ENSCPBG00000019348) ENSCPBG00000019343 ADGRB2 (ENSCPBG00000019038) ENSCPBG00000018992 ENSCPBG00000018978 PEF1 (ENSCPBG00000018974) TINAGL1 (ENSCPBG00000018969) ENSCPBG00000018967 KCNQ4 (ENSCPBG00000018964) #20 NFYC (ENSCPBG00000018957) #21 RIMS3 (ENSCPBG00000018956) #22 SMAP2 (ENSCPBG00000018953) #27 COL9A2 (ENSCPBG00000018950) #28 ENSCPBG00000018942 ENSCPBG00000018940 ENSCPBG00000018789 C1orf94 (ENSCPBG00000018722) GJB5 (ENSCPBG00000018713) GJB4 (ENSCPBG00000018710) ENSCPBG00000018708 GJB3 (ENSCPBG00000018701) GJA4 (ENSCPBG00000018698) SMIM12 (ENSCPBG00000018693) DLGAP3 (ENSCPBG00000018687) ENSCPBG00000018683 TMEM35B (ENSCPBG00000018680) Three-toed box turtle MODERN SPECIES 111 EIF3I (ENSTMTG00000003389) ENSTMTG00000003426 FAM167B (ENSTMTG00000003487) LCK (ENSTMTG00000003509) HDAC1 (ENSTMTG00000003654) MARCKSL1 (ENSTMTG00000003687) TMEM39B (ENSTMTG00000003698) KHDRBS1 (ENSTMTG00000003740) PTP4A2 (ENSTMTG00000003763) ADGRB2 (ENSTMTG00000003868) ENSTMTG00000004893 PEF1 (ENSTMTG00000004914) ENSTMTG00000004944 KCNQ4 (ENSTMTG00000004988) #20 NFYC (ENSTMTG00000005156) #21 RIMS3 (ENSTMTG00000005184) #22 SMAP2 (ENSTMTG00000005209) #27 CSMD2 (ENSTMTG00000005268) ENSTMTG00000005432 C1orf94 (ENSTMTG00000005447) ENSTMTG00000005458 GJB5 (ENSTMTG00000005466) ENSTMTG00000005475 GJB4 (ENSTMTG00000005483) ENSTMTG00000005489 GJB3 (ENSTMTG00000005494) GJA4 (ENSTMTG00000005509) SMIM12 (ENSTMTG00000005528) DLGAP3 (ENSTMTG00000005580) ENSTMTG00000006056 TMEM35B (ENSTMTG00000006072) Chinese turtle MODERN SPECIES 1260 PEF1 (ENSPSIG00000011995) ENSPSIG00000001997 TINAGL1 (ENSPSIG00000011883) KCNQ4 (ENSPSIG00000011393) #20 NFYC (ENSPSIG00000010059) #21 RIMS3 (ENSPSIG00000009297) #22 SMAP2 (ENSPSIG00000007644) #27 COL9A2 (ENSPSIG00000013876) #28 Lepidosauria ANCESTRAL SPECIES 18 ENSGT00940000159693 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00960000189425 ENSGT00940000159768 ENSGT00940000166312.b.a ENSGT00940000164318 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b Episquamata ANCESTRAL SPECIES 7 ENSGT00940000159693 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00960000189425 ENSGT00940000159768 ENSGT00940000166312.b.a ENSGT00940000164318 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b Toxicofera ANCESTRAL SPECIES 29 ENSGT00940000161371 ENSGT00940000163547 ENSGT00940000159693 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768 ENSGT00940000166312.b.a ENSGT00940000164318 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT00980000199132 ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513 ENSGT01100000263536.A.b ENSGT00940000154325.b Elapidae ANCESTRAL SPECIES 9 ENSGT00940000161371 ENSGT00940000163547 ENSGT00940000159693 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768 ENSGT00960000189425 ENSGT00940000155549.a.b ENSGT00940000166312.b.b ENSGT00940000164318 ENSGT00390000017672 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513.a ENSGT00940000159513.b Indian cobra MODERN SPECIES 11 ENSNNAG00000017527 FAM167B (ENSNNAG00000017532) LCK (ENSNNAG00000017536) HDAC1 (ENSNNAG00000017544) MARCKSL1 (ENSNNAG00000017554) ENSNNAG00000017555 ENSNNAG00000017562 KHDRBS1 (ENSNNAG00000017568) PTP4A2 (ENSNNAG00000017587) ENSNNAG00000017609 ENSNNAG00000017713 PEF1 (ENSNNAG00000017782) TINAGL1 (ENSNNAG00000017786) KCNQ4 (ENSNNAG00000017791) #20 NFYC (ENSNNAG00000017795) #21 RIMS3 (ENSNNAG00000017807) #22 SMAP2 (ENSNNAG00000017818) #27 COL9A2 (ENSNNAG00000017827) #28 CSMD2 (ENSNNAG00000017865) ENSNNAG00000017963 C1orf94 (ENSNNAG00000017969) GJB5 (ENSNNAG00000017972) ENSNNAG00000017976 GJB3 (ENSNNAG00000017979) GJA4 (ENSNNAG00000017982) SMIM12 (ENSNNAG00000017988) DLGAP3 (ENSNNAG00000018007) ENSNNAG00000018032 TMEM35B (ENSNNAG00000018038) ENSNNAG00000018044 ZMYM4 (ENSNNAG00000018098) Elapidae_a ANCESTRAL SPECIES 15 ENSGT00940000161371 ENSGT00940000163547 ENSGT00940000159693 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00960000189425 ENSGT00940000159768 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B ENSGT00390000009435 ENSGT00940000159513.a ENSGT00940000159513.b ENSGT01100000263536.A.b ENSGT00940000154325.b ENSGT00940000159550 ENSGT00950000182941.a.a.b ENSGT00940000164972 Acanthophiinae ANCESTRAL SPECIES 25 ENSGT00940000161371 ENSGT00940000163547 ENSGT00940000159693 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00960000189425 ENSGT00940000159768 ENSGT00940000161219.d ENSGT00940000161219.c ENSGT00390000007786.b ENSGT01050000244893.c.b.a ENSGT01050000244961.b ENSGT00940000159620.b.a ENSGT00550000074829.ac.a ENSGT00940000154244.B ENSGT00940000153560.b.a.b ENSGT00940000161095 ENSGT01060000248591.b ENSGT00940000160074 Eastern brown snake MODERN SPECIES 19 ENSPTXG00000004162 FAM167B (ENSPTXG00000004161) LCK (ENSPTXG00000004160) HDAC1 (ENSPTXG00000004159) MARCKSL1 (ENSPTXG00000004158) TMEM39B (ENSPTXG00000004157) KHDRBS1 (ENSPTXG00000004156) PTP4A2 (ENSPTXG00000004155) ENSPTXG00000004154 ADGRB2 (ENSPTXG00000003492) PEF1 (ENSPTXG00000003440) TINAGL1 (ENSPTXG00000003439) ENSPTXG00000003438 KCNQ4 (ENSPTXG00000003435) #20 NFYC (ENSPTXG00000003431) #21 RIMS3 (ENSPTXG00000003430) #22 SMAP2 (ENSPTXG00000003427) #27 ENSPTXG00000003425 ENSPTXG00000003421 ENSPTXG00000003420 GJB5 (ENSPTXG00000003419) GJB3 (ENSPTXG00000003418) GJA4 (ENSPTXG00000003417) SMIM12 (ENSPTXG00000003416) DLGAP3 (ENSPTXG00000003414) ENSPTXG00000003413 TMEM35B (ENSPTXG00000003412) ENSPTXG00000003410 ZMYM4 (ENSPTXG00000002416) ENSPTXG00000002031 ENSPTXG00000002030 Mainland tiger snake MODERN SPECIES 56 ENSNSUG00000012020 ENSNSUG00000012002 ENSNSUG00000011938 FAM167B (ENSNSUG00000011937) LCK (ENSNSUG00000011936) HDAC1 (ENSNSUG00000011935) MARCKSL1 (ENSNSUG00000011934) TMEM39B (ENSNSUG00000011932) KHDRBS1 (ENSNSUG00000011931) PTP4A2 (ENSNSUG00000011930) ADGRB2 (ENSNSUG00000011864) PEF1 (ENSNSUG00000011862) TINAGL1 (ENSNSUG00000011861) KCNQ4 (ENSNSUG00000011860) #20 NFYC (ENSNSUG00000011858) #21 RIMS3 (ENSNSUG00000011857) #22 SMAP2 (ENSNSUG00000011856) #27 ENSNSUG00000011855 ENSNSUG00000011854 ENSNSUG00000011853 C1orf94 (ENSNSUG00000011852) ENSNSUG00000011851 Blue-lipped sea krait MODERN SPECIES 1593 RIMS3 (ENSLLTG00000001711) #22 SMAP2 (ENSLLTG00000001718) #27 Lizard MODERN SPECIES 922 TMEM39B (ENSACAG00000011591) KHDRBS1 (ENSACAG00000011693) PTP4A2 (ENSACAG00000040150) ENSACAG00000011847 ENSACAG00000039679 ADGRB2 (ENSACAG00000011853) PEF1 (ENSACAG00000037503) TINAGL1 (ENSACAG00000012412) KCNQ4 (ENSACAG00000012490) #20 ENSACAG00000012591 #21 RIMS3 (ENSACAG00000014438) #22 SMAP2 (ENSACAG00000014470) #27 ENSACAG00000014522 ENSACAG00000014787 Laterata ANCESTRAL SPECIES 38 ENSGT00940000163547 ENSGT00940000159693 ENSGT00940000161163 ENSGT00940000154301 ENSGT00730000111349 ENSGT00390000018895.b ENSGT00940000155718 ENSGT00940000154383 ENSGT00940000162194 ENSGT00940000160103 ENSGT00940000161782 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00960000189425 Common wall lizard MODERN SPECIES 16 ENSPMRG00000009648 FAM167B (ENSPMRG00000009642) LCK (ENSPMRG00000009632) HDAC1 (ENSPMRG00000009621) MARCKSL1 (ENSPMRG00000009613) TMEM39B (ENSPMRG00000009596) KHDRBS1 (ENSPMRG00000009579) PTP4A2 (ENSPMRG00000009551) ENSPMRG00000009480 ADGRB2 (ENSPMRG00000008643) ENSPMRG00000008401 PEF1 (ENSPMRG00000008383) TINAGL1 (ENSPMRG00000008370) KCNQ4 (ENSPMRG00000008319) #20 NFYC (ENSPMRG00000008287) #21 RIMS3 (ENSPMRG00000008276) #22 SMAP2 (ENSPMRG00000008263) #27 COL9A2 (ENSPMRG00000008217) #28 ENSPMRG00000008198 CSMD2 (ENSPMRG00000011468) C1orf94 (ENSPMRG00000011438) ENSPMRG00000011431 ENSPMRG00000011429 ENSPMRG00000011426 GJB4 (ENSPMRG00000011424) GJB3 (ENSPMRG00000011422) GJA4 (ENSPMRG00000011419) SMIM12 (ENSPMRG00000011417) DLGAP3 (ENSPMRG00000011410) ENSPMRG00000011406 ENSPMRG00000011405 Argentine black and white tegu MODERN SPECIES 82 FAM167B (ENSSMRG00000012033) LCK (ENSSMRG00000011981) MARCKSL1 (ENSSMRG00000011980) HDAC1 (ENSSMRG00000011979) ENSSMRG00000011976 TMEM39B (ENSSMRG00000011975) KHDRBS1 (ENSSMRG00000011971) PTP4A2 (ENSSMRG00000011968) ENSSMRG00000011964 ADGRB2 (ENSSMRG00000011919) COL16A1 (ENSSMRG00000011911) PEF1 (ENSSMRG00000011909) TINAGL1 (ENSSMRG00000011908) KCNQ4 (ENSSMRG00000011833) #20 NFYC (ENSSMRG00000011832) #21 RIMS3 (ENSSMRG00000011831) #22 SMAP2 (ENSSMRG00000011830) #27 ENSSMRG00000011828 ENSSMRG00000011726 C1orf94 (ENSSMRG00000011719) GJB5 (ENSSMRG00000011709) ENSSMRG00000011708 GJB3 (ENSSMRG00000011703) GJA4 (ENSSMRG00000011702) ENSSMRG00000011701 SMIM12 (ENSSMRG00000011700) DLGAP3 (ENSSMRG00000011699) ENSSMRG00000011691 TMEM35B (ENSSMRG00000011690) SFPQ (ENSSMRG00000011683) ZMYM4 (ENSSMRG00000011677) tuatara MODERN SPECIES 1060 ADGRB2 (ENSSPUG00000016008) ENSSPUG00000016384 PEF1 (ENSSPUG00000016393) TINAGL1 (ENSSPUG00000016409) KCNQ4 (ENSSPUG00000016437) #20 NFYC (ENSSPUG00000016450) #21 RIMS3 (ENSSPUG00000016463) #22 SMAP2 (ENSSPUG00000016473) #27 ENSSPUG00000016487 Anura ANCESTRAL SPECIES 37 ENSGT00940000161371 ENSGT00940000165828 ENSGT00940000155718 ENSGT00390000018895.b ENSGT01050000244950.a.b ENSGT00940000158303 ENSGT00500000044870.b ENSGT00940000161946 ENSGT00940000154383 ENSGT00940000160103 ENSGT00940000163129 ENSGT00940000155722 ENSGT00940000160023 ENSGT00940000159209.f #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000159768 ENSGT00940000164318 ENSGT01030000234513.A.a.a.a.b.b ENSGT01030000234513.A.a.a.a.b.a ENSGT01030000234513.A.a.a.a.a ENSGT01090000260070.B.d ENSGT01090000260070.B.c.a ENSGT00390000009435 ENSGT00390000002053 #29 ENSGT00390000004660.C.a.b ENSGT00940000157193 ENSGT00950000182852.A.b ENSGT00950000183215.c.b Frog MODERN SPECIES 2 smim12 (ENSXETG00000041748) gja4 (ENSXETG00000026789) cx38 (ENSXETG00000039917) gjb3 (ENSXETG00000016481) GJB4 (ENSXETG00000045576) gjb4 (ENSXETG00000032209) ENSXETG00000046092 ENSXETG00000042524 ENSXETG00000045589 c1orf94 (ENSXETG00000044177) csmd2 (ENSXETG00000003368) col9a2 (ENSXETG00000034542) #28 smap2 (ENSXETG00000004776) #27 kcnq4 (ENSXETG00000004775) #20 nfyc (ENSXETG00000025363) #21 rims3 (ENSXETG00000017630) #22 tinagl1 (ENSXETG00000017634) pef1 (ENSXETG00000017650) col16a1 (ENSXETG00000038251) adgrb2 (ENSXETG00000017680) ENSXETG00000047904 ptp4a2 (ENSXETG00000005239) dcdc2b (ENSXETG00000005240) iqcc (ENSXETG00000040824) ccdc28b (ENSXETG00000027651) txlna (ENSXETG00000005241) kpna6 (ENSXETG00000005242) tmem39b (ENSXETG00000005243) khdrbs1 (ENSXETG00000005246) tmem234 (ENSXETG00000035566) eif3i (ENSXETG00000005247) Leishan spiny toad MODERN SPECIES 5 CCDC28B (ENSLLEG00000006450) ENSLLEG00000005999 PTP4A2 (ENSLLEG00000005936) ENSLLEG00000005905 ENSLLEG00000005887 ENSLLEG00000005877 ENSLLEG00000005864 ENSLLEG00000005850 ADGRB2 (ENSLLEG00000005538) ENSLLEG00000005494 PEF1 (ENSLLEG00000003357) ENSLLEG00000003341 TINAGL1 (ENSLLEG00000003272) KCNQ4 (ENSLLEG00000003140) #20 ENSLLEG00000003106 #21 RIMS3 (ENSLLEG00000003063) #22 SMAP2 (ENSLLEG00000003008) #27 COL9A2 (ENSLLEG00000002941) #28 ENSLLEG00000002924 CSMD2 (ENSLLEG00000002823) ENSLLEG00000002776 ENSLLEG00000002763 ENSLLEG00000002754 ENSLLEG00000002747 GJB5 (ENSLLEG00000002735) GJB4 (ENSLLEG00000002723) ENSLLEG00000002718 GJB3 (ENSLLEG00000002704) ENSLLEG00000002685 ENSLLEG00000002665 FHL3 (ENSLLEG00000002645) Coelacanth MODERN SPECIES 590 ADGRB2 (ENSLACG00000003170) COL16A1 (ENSLACG00000010087) PEF1 (ENSLACG00000011867) HCRTR1 (ENSLACG00000011960) TINAGL1 (ENSLACG00000012740) KCNQ4 (ENSLACG00000013552) #20 NFYC (ENSLACG00000014668) #21 RIMS3 (ENSLACG00000015226) #22 SMAP2 (ENSLACG00000015414) #27 COL9A2 (ENSLACG00000015553) #28 LSM10 (ENSLACG00000015904) STK40 (ENSLACG00000016024) Actinopterygii ANCESTRAL SPECIES 137 ENSGT01030000234911 ENSGT01030000234513.A.a.a.a.a ENSGT01020000230683 ENSGT01030000234513.A.a.a.a.b.c ENSGT01070000253744.a.a.b.a ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000158302.d.b ENSGT00940000161782 ENSGT00940000160103 ENSGT00940000154383 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513 Neopterygii ANCESTRAL SPECIES 48 ENSGT00940000154576 ENSGT00940000158451 ENSGT00950000182995.e.a.b ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00940000177120 ENSGT00940000166468 ENSGT00980000198642 ENSGT00940000155272 ENSGT01070000253744.a.a.b.a ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000158302.d.b ENSGT00940000161782 ENSGT00940000160103 ENSGT00940000154383 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513 Osteoglossocephalai ANCESTRAL SPECIES 25 ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000156221 ENSGT00940000154576 ENSGT00940000158451 ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000155272 ENSGT00390000003465.b.a ENSGT00940000160023 ENSGT00940000165648 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000158302.d.b ENSGT00940000158302.d.a ENSGT00940000160103 ENSGT00940000154383.a ENSGT00940000154317.a.a ENSGT00960000186902 ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B Osteoglossiformes ANCESTRAL SPECIES 1 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000156221 ENSGT00940000159550.g ENSGT00940000154576 ENSGT00940000158451 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00390000003465.b.a ENSGT00940000160023 ENSGT00940000159209 #20 ENSGT00940000155689 #21 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000158302.d.a ENSGT00940000160103 ENSGT00940000154383.a ENSGT00940000154317.a.a ENSGT00960000186902 ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT00940000155722 ENSGT01090000260070.B ENSGT00940000159513.k ENSGT00440000035378.c ENSGT00940000154994.b Asian bonytongue MODERN SPECIES 15 rpl11 (ENSSFOG00015022461) ENSSFOG00015022469 eloa (ENSSFOG00015022482) pithd1 (ENSSFOG00015022511) lypla2 (ENSSFOG00015029087) sfpq (ENSSFOG00015028929) ENSSFOG00015009224 ak2 (ENSSFOG00015009206) rnf19b (ENSSFOG00015009175) ndufs5 (ENSSFOG00015024412) bmp8a (ENSSFOG00015030359) zgc:91910 (ENSSFOG00015026591) TINAGL1 (ENSSFOG00015032290) KCNQ4 (ENSSFOG00015008758) #20 nfyc (ENSSFOG00015008658) #21 rims3 (ENSSFOG00015008570) #22 smap2 (ENSSFOG00015008537) #27 ENSSFOG00015025746 ENSSFOG00015029580 ENSSFOG00015008435 ADGRB2 (ENSSFOG00015008397) ptp4a2b (ENSSFOG00015025849) col8a2 (ENSSFOG00015008345) ENSSFOG00015025579 trappc3 (ENSSFOG00015008327) angpt2b (ENSSFOG00015008279) ENSSFOG00015008138 GJB5 (ENSSFOG00015023521) gja4 (ENSSFOG00015008075) dlgap3 (ENSSFOG00015007946) fuca1.2 (ENSSFOG00015007917) P. kingsleyae MODERN SPECIES 27 rpl11 (ENSPKIG00000022926) ENSPKIG00000022938 eloa (ENSPKIG00000022960) pithd1 (ENSPKIG00000022990) lypla2 (ENSPKIG00000023009) sfpq (ENSPKIG00000023035) ZMYM4 (ENSPKIG00000023057) ak2 (ENSPKIG00000023102) rnf19b (ENSPKIG00000023127) ndufs5 (ENSPKIG00000023159) MACF1 (ENSPKIG00000023210) bmp8a (ENSPKIG00000023298) TINAGL1 (ENSPKIG00000023340) KCNQ4 (ENSPKIG00000023405) #20 nfyc (ENSPKIG00000023464) #21 rims3 (ENSPKIG00000023497) #22 smap2 (ENSPKIG00000023520) #27 col9a2 (ENSPKIG00000023550) #28 ENSPKIG00000023589 ADGRB2 (ENSPKIG00000023738) ENSPKIG00000023977 ptp4a2b (ENSPKIG00000023998) col8a2 (ENSPKIG00000024023) ENSPKIG00000024037 trappc3 (ENSPKIG00000024048) angpt2b (ENSPKIG00000024068) ENSPKIG00000024135 ENSPKIG00000024315 gjb9b (ENSPKIG00000024323) dlgap3 (ENSPKIG00000024338) fuca1.2 (ENSPKIG00000024361) Clupeocephala ANCESTRAL SPECIES 178 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000158302.d.b ENSGT00940000160103 ENSGT00940000154383.a ENSGT00940000154317.a.a ENSGT00960000186902 ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513 Otomorpha ANCESTRAL SPECIES 359 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000161290 #28 ENSGT00940000158302.d.b ENSGT00940000160103 ENSGT00940000154383.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513 Clupeiformes ANCESTRAL SPECIES 172 ENSGT00940000163281.b ENSGT01090000259987.b.a ENSGT00940000162033.a.b.a ENSGT00940000157827 ENSGT00940000159108 ENSGT00390000011295.b ENSGT00390000014833 ENSGT00940000155137.a.b ENSGT00940000155602 ENSGT00390000000118 ENSGT00390000018531 ENSGT00940000158906.j ENSGT00940000154896.k.b ENSGT00940000154896.k.a ENSGT00510000049601.a ENSGT00940000159332 #22 ENSGT00940000158387 #27 Atlantic herring MODERN SPECIES 10 ENSCHAG00000022506 RAPGEF5 (ENSCHAG00000000509) klhl7 (ENSCHAG00000000744) nup42 (ENSCHAG00000000855) tert (ENSCHAG00000001169) slc6a18 (ENSCHAG00000002089) ENSCHAG00000005484 ENSCHAG00000005793 ENSCHAG00000007797 gstr (ENSCHAG00000007988) gstr (ENSCHAG00000008392) gstt1b (ENSCHAG00000008404) ENSCHAG00000008441 gstr (ENSCHAG00000008456) gstr (ENSCHAG00000008471) rims3 (ENSCHAG00000008510) #22 smap2 (ENSCHAG00000008522) #27 ADGRB1 (ENSCHAG00000008603) ENSCHAG00000010580 ENSCHAG00000010618 HERPUD2 (ENSCHAG00000010629) ENSCHAG00000010636 SLC4A7 (ENSCHAG00000010801) eomesa (ENSCHAG00000011934) ENSCHAG00000012075 TGFBR2 (ENSCHAG00000012929) STT3B (ENSCHAG00000012942) OSBPL10 (ENSCHAG00000013053) TMEM42 (ENSCHAG00000013078) zdhhc3b (ENSCHAG00000013088) exosc7 (ENSCHAG00000013145) Denticle herring MODERN SPECIES 12 ITGB8 (ENSDCDG00000027510) ENSDCDG00000027491 sp4 (ENSDCDG00000027489) CDCA7L (ENSDCDG00000027486) hycc1 (ENSDCDG00000027472) TOMM7 (ENSDCDG00000027466) RAPGEF5 (ENSDCDG00000027461) klhl7 (ENSDCDG00000027457) nup42 (ENSDCDG00000027453) tert (ENSDCDG00000027427) slc6a18 (ENSDCDG00000027241) ENSDCDG00000027204 slc6a19a.1 (ENSDCDG00000027158) ENSDCDG00000027139 gstr (ENSDCDG00000027129) rims3 (ENSDCDG00000027128) #22 smap2 (ENSDCDG00000027127) #27 zfpm2b (ENSDCDG00000026903) NEK10 (ENSDCDG00000026895) lrp12 (ENSDCDG00000026885) ENSDCDG00000026878 ENSDCDG00000026042 slc25a32a (ENSDCDG00000026027) cthrc1a (ENSDCDG00000026026) mc5ra (ENSDCDG00000026025) rnmt (ENSDCDG00000025904) fam210aa (ENSDCDG00000025902) LDLRAD4 (ENSDCDG00000025901) seh1l (ENSDCDG00000025900) ENSDCDG00000025897 vps45 (ENSDCDG00000025870) Otophysi ANCESTRAL SPECIES 95 ENSGT00390000014184 ENSGT00940000156985.h ENSGT00940000156206.e ENSGT00940000156479.b ENSGT00940000159220.d ENSGT00950000183211.a.b.b ENSGT00390000006790.b ENSGT00390000001994 ENSGT00390000002457.c ENSGT00390000010029 ENSGT00940000164651.a.a.c ENSGT00940000165423.b ENSGT00390000008029 ENSGT00390000003051 ENSGT00950000183046.b.b ENSGT00940000159332 #22 ENSGT01030000234863.a ENSGT00940000159581.b.b Characiphysae ANCESTRAL SPECIES 51 ENSGT00390000014184 ENSGT00940000156985.h ENSGT00940000156206.e ENSGT00940000156479.b ENSGT00940000159220.d ENSGT00950000183211.a.b.b ENSGT00390000006790.b ENSGT00390000001994 ENSGT00390000002457.c ENSGT00390000010029 ENSGT00940000164651.a.a.c ENSGT00940000165423.b ENSGT00390000008029 ENSGT00390000003051 ENSGT00950000183046.b.b ENSGT00940000159332 #22 ENSGT00940000159581.b.b Channel catfish MODERN SPECIES 3 ENSIPUG00000017620 ENSIPUG00000017600 ENSIPUG00000017589 dtnbp1b (ENSIPUG00000017544) jarid2 (ENSIPUG00000017520) pard6gb (ENSIPUG00000017510) bloc1s4 (ENSIPUG00000017477) asns (ENSIPUG00000017428) tac1 (ENSIPUG00000017395) ENSIPUG00000017308 sdhaf3 (ENSIPUG00000017298) ENSIPUG00000017293 rpa3 (ENSIPUG00000017268) umad1 (ENSIPUG00000017256) glcci1 (ENSIPUG00000017224) RIMS3 (ENSIPUG00000017195) #22 ptp4a3a (ENSIPUG00000017176) ENSIPUG00000017158 ENSIPUG00000017142 ENSIPUG00000017109 ENSIPUG00000017062 ENSIPUG00000016973 ENSIPUG00000016954 mylipa (ENSIPUG00000016917) npr1a (ENSIPUG00000016873) ints3 (ENSIPUG00000016699) ENSIPUG00000016661 ENSIPUG00000016655 pdia8 (ENSIPUG00000016619) csnk2b (ENSIPUG00000016575) prrc2a (ENSIPUG00000016528) Characiphysae_b ANCESTRAL SPECIES 126 ENSGT00390000014184 ENSGT00940000156985.h ENSGT00940000156206.e ENSGT00940000156479.b ENSGT00940000159220.d ENSGT00950000183211.a.b.b ENSGT00390000006790.b ENSGT00390000001994 ENSGT00390000002457.c ENSGT00390000010029 ENSGT00940000164651.a.a.c ENSGT00940000165423.b ENSGT00390000008029 ENSGT00390000003051 ENSGT00950000183046.b.b ENSGT00940000159332 #22 ENSGT00940000159581.b.b Electric eel MODERN SPECIES 455 pard6gb (ENSEEEG00000011856) bloc1s4 (ENSEEEG00000011855) tac1 (ENSEEEG00000011851) sdhaf3 (ENSEEEG00000011850) COL28A1 (ENSEEEG00000011848) rpa3 (ENSEEEG00000011847) umad1 (ENSEEEG00000011845) glcci1a (ENSEEEG00000011839) rims3 (ENSEEEG00000011832) #22 ptp4a3a (ENSEEEG00000011829) si:ch211-264f5.2 (ENSEEEG00000011823) pdk2b (ENSEEEG00000011648) ENSEEEG00000011643 ENSEEEG00000011638 ENSEEEG00000011621 ENSEEEG00000011616 Characoidei ANCESTRAL SPECIES 79 ENSGT00390000014184 ENSGT00940000156985.h ENSGT00940000156206.e ENSGT00940000156479.b ENSGT00940000159220.d ENSGT00950000183211.a.b.b ENSGT00390000006790.b ENSGT00390000001994.c ENSGT00390000002457.c ENSGT00390000010029 ENSGT00940000164651.a.a.c ENSGT00940000165423.b ENSGT00940000165163 ENSGT00390000003051 ENSGT00950000183046.b.b ENSGT00940000159332 #22 ENSGT00940000159581.b.b ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b ENSGT00390000008812.b.a ENSGT00940000158053 ENSGT01100000263475.f.b.g ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000154222.d.b ENSGT00390000009677 ENSGT00390000004417.a ENSGT00390000002869 ENSGT00390000008274 ENSGT00940000164585.c.a.a.b Red-bellied piranha MODERN SPECIES 1421 glcci1a (ENSPNAG00000029676) rims3 (ENSPNAG00000029667) #22 Mexicana tetra MODERN SPECIES 15 ENSAMXG00000030067 pard6gb (ENSAMXG00000035492) bloc1s4 (ENSAMXG00000043143) asns (ENSAMXG00000029843) ENSAMXG00000043078 asns (ENSAMXG00000039240) tac1 (ENSAMXG00000033449) sdhaf3 (ENSAMXG00000039809) c1galt1a (ENSAMXG00000042754) col28a1a (ENSAMXG00000015729) ENSAMXG00000042726 umad1 (ENSAMXG00000042230) ENSAMXG00000038644 glcci1a (ENSAMXG00000015807) ENSAMXG00000032606 rims3 (ENSAMXG00000015828) #22 ptp4a3a (ENSAMXG00000038147) ENSAMXG00000013192 ENSAMXG00000015859 ENSAMXG00000030341 ENSAMXG00000031540 ENSAMXG00000001132 ENSAMXG00000037320 ENSAMXG00000037864 ENSAMXG00000033245 ENSAMXG00000042428 myo1g (ENSAMXG00000017476) ENSAMXG00000017459 ENSAMXG00000031043 ENSAMXG00000042852 si:ch211-195b13.1 (ENSAMXG00000036994) Cyprinoidei ANCESTRAL SPECIES 15 ENSGT00390000014184 ENSGT00940000156985.h ENSGT00940000156206.e ENSGT00940000156479.b ENSGT00940000159220.d ENSGT00950000183211.a.b.b.a ENSGT00390000006790.b ENSGT00390000001994 ENSGT00390000002457.c ENSGT00390000010029 ENSGT00940000164651.a.a.c ENSGT00940000165423.b ENSGT00390000008029 ENSGT00390000003051 ENSGT00950000183046.b.b ENSGT00940000159332 #22 ENSGT01030000234863.a ENSGT00940000159581.b.b ENSGT01090000260093.b.e ENSGT01090000260093.b.f ENSGT00950000182978.B ENSGT00940000164496.a.a ENSGT00940000158053 ENSGT00390000008812.b.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 416 ENSGT00940000159332.a #22 ENSGT01030000234863.a ENSGT00940000159581.b.b.e.b ENSGT00940000159581.b.b.e.a ENSGT01090000260093.b.e ENSGT01090000260093.b.f.l.a.b ENSGT01090000260093.b.f.k.a.b.b ENSGT01090000260093.b.f.k.a.a ENSGT00950000182978.B.b.a.b ENSGT00940000164496.a.a.f.a ENSGT00940000158053.t ENSGT00390000008812.b.a.a.a ENSGT00940000159283.c.a.b ENSGT00950000182919.B.a.h ENSGT00940000158522.m ENSGT00990000204388.b Cyprininae_a ANCESTRAL SPECIES 147 ENSGT00940000156479.b.d ENSGT00940000159220.d.b ENSGT00950000183211.a.b.b.a.a.b ENSGT00390000006790.b.i ENSGT00390000001994.f ENSGT00390000010029.k.b ENSGT00940000164651.a.a.c.a ENSGT00940000165423.b ENSGT00390000002457.c ENSGT00390000010029.k.a ENSGT00940000164651.a.a.c.b ENSGT00940000163195.A.d ENSGT00390000008029 ENSGT00390000003051 ENSGT00950000183046.b.b.a ENSGT00940000159332.a #22 ENSGT01030000234863.a ENSGT00940000159581.b.b.e.b ENSGT00940000159581.b.b.e.a ENSGT01090000260093.b.e ENSGT01090000260093.b.f.l.a.b ENSGT01090000260093.b.f.k.a.b.b ENSGT01090000260093.b.f.k.a.a ENSGT00950000182978.B.a ENSGT00940000164496.a.a.f.a ENSGT00940000158053.t ENSGT00390000008812.b.a.a.a ENSGT00940000159283.c.a.b ENSGT00950000182919.B.a.h ENSGT00990000204388.b ENSGT00400000025005.a.a Golden-line barbel MODERN SPECIES 247 dtnbp1b (ENSSGRG00000009697) jarid2b (ENSSGRG00000009699) pard6gb (ENSSGRG00000009701) bloc1s4 (ENSSGRG00000009702) asns (ENSSGRG00000009704) tac1 (ENSSGRG00000009748) sdhaf3 (ENSSGRG00000009749) sdhaf3 (ENSSGRG00000009750) rpa3 (ENSSGRG00000009757) glcci1a (ENSSGRG00000009759) rims3 (ENSSGRG00000009761) #22 ENSSGRG00000009765 ptp4a3a (ENSSGRG00000009768) ENSSGRG00000009781 xkr8.3 (ENSSGRG00000009783) ENSSGRG00000009785 ENSSGRG00000009786 ENSSGRG00000009787 eya3 (ENSSGRG00000009805) myo1g (ENSSGRG00000009807) si:dkeyp-92c9.2 (ENSSGRG00000010065) thbs3b (ENSSGRG00000010111) mtx1b (ENSSGRG00000013648) ENSSGRG00000013650 polr3gla (ENSSGRG00000013651) ENSSGRG00000013655 Common carp reference MODERN SPECIES 12 ints3 (ENSCCRG00000003855) npr1a (ENSCCRG00000050084) mylipa (ENSCCRG00000074532) dtnbp1b (ENSCCRG00000006924) jarid2b (ENSCCRG00000006920) ENSCCRG00000067869 pard6gb (ENSCCRG00000056069) bloc1s4 (ENSCCRG00000054452) asns (ENSCCRG00000039238) tac1 (ENSCCRG00000039211) sdhaf3 (ENSCCRG00000047133) c1galt1a (ENSCCRG00000068338) ENSCCRG00000059211 rpa3 (ENSCCRG00000071692) glcci1a (ENSCCRG00000056076) rims3 (ENSCCRG00000066220) #22 ENSCCRG00000037001 ptp4a3a (ENSCCRG00000053762) ENSCCRG00000053890 ENSCCRG00000058002 ENSCCRG00000008333 ENSCCRG00000011038 ENSCCRG00000001226 ENSCCRG00000067593 ENSCCRG00000069884 xkr8.3 (ENSCCRG00000062469) ENSCCRG00000025449 ENSCCRG00000075227 ENSCCRG00000024720 eya3 (ENSCCRG00000007984) si:ch211-195b13.1 (ENSCCRG00000059502) Goldfish MODERN SPECIES 10 ENSCARG00000032689 npr1a (ENSCARG00000032180) mylipa (ENSCARG00000032126) dtnbp1b (ENSCARG00000032117) jarid2b (ENSCARG00000031463) pard6gb (ENSCARG00000031355) bloc1s4 (ENSCARG00000031319) asns (ENSCARG00000031261) tac1 (ENSCARG00000031237) sdhaf3 (ENSCARG00000031223) c1galt1a (ENSCARG00000031217) col28a1a (ENSCARG00000031185) rpa3 (ENSCARG00000031173) ENSCARG00000050528 glcci1a (ENSCARG00000050470) rims3 (ENSCARG00000050442) #22 nt5c1aa (ENSCARG00000050437) hpca (ENSCARG00000050415) tmem54b (ENSCARG00000050381) zgc:91944 (ENSCARG00000050336) heyl (ENSCARG00000050316) zbtb8b (ENSCARG00000050303) FUCA1 (ENSCARG00000050066) gmpr (ENSCARG00000049705) atxn1a (ENSCARG00000049692) ENSCARG00000049631 fabp4a (ENSCARG00000049584) mrpl53 (ENSCARG00000049574) ENSCARG00000049565 znf704 (ENSCARG00000049538) tpd52 (ENSCARG00000049403) Cyprininae ANCESTRAL SPECIES 304 ENSGT00390000014184.i ENSGT00940000156985.h.i ENSGT00940000156206.e.b ENSGT00940000156479.b.d ENSGT00940000159220.d.b ENSGT00950000183211.a.b.b.a.a.b ENSGT00390000006790.b.i ENSGT00390000001994.f ENSGT00390000002457.c ENSGT00390000010029.k.a ENSGT00940000164651.a.a.c.b ENSGT00940000165423.b ENSGT00390000008029 ENSGT00390000003051 ENSGT00950000183046.b.b ENSGT00940000159332.b #22 ENSGT00940000159581.b.b.f ENSGT01090000260093.b.f.l.a.a ENSGT00940000178710 ENSGT01090000260093.b.f.k.a.b.a ENSGT00950000182978.B.a ENSGT01090000260093.b.f.k.b ENSGT00950000182978.B.b.a.a ENSGT00940000164496.a.a.f.b Goldfish MODERN SPECIES 983 pdia8 (ENSCARG00000056117) ENSCARG00000056181 ints3 (ENSCARG00000056316) npr1a (ENSCARG00000057484) mylipa (ENSCARG00000058594) dtnbp1b (ENSCARG00000058635) jarid2b (ENSCARG00000058671) pard6gb (ENSCARG00000058732) bloc1s4 (ENSCARG00000058757) asns (ENSCARG00000058813) tac1 (ENSCARG00000030384) ENSCARG00000030400 rpa3 (ENSCARG00000030411) umad1 (ENSCARG00000030421) glcci1a (ENSCARG00000030427) rims3 (ENSCARG00000030445) #22 ptp4a3a (ENSCARG00000030463) ENSCARG00000030497 ENSCARG00000030513 ENSCARG00000030584 eya3 (ENSCARG00000030613) si:ch211-195b13.1 (ENSCARG00000031474) Cyprininae_a ANCESTRAL SPECIES 122 ENSGT00950000183046.b.b.b ENSGT00940000159332.b #22 ENSGT00940000159581.b.b.f ENSGT01090000260093.b.f.l.a.a ENSGT00940000178710 ENSGT01090000260093.b.f.k.a.b.a ENSGT01090000260093.b.f.k.b ENSGT00950000182978.B.b.a.a ENSGT00940000164496.a.a.f.b ENSGT01100000263547.a.a.a.c.b.a ENSGT00940000158053.s ENSGT00390000008812.b.a.a.b ENSGT00940000159283.c.a.a ENSGT00940000158522.m ENSGT00990000204388.a ENSGT00400000025005.a.b ENSGT00940000154870.A.b.b Common carp reference MODERN SPECIES 31 ints3 (ENSCCRG00000002797) npr1a (ENSCCRG00000038385) ENSCCRG00000064029 mylipa (ENSCCRG00000012480) dtnbp1b (ENSCCRG00000011037) jarid2b (ENSCCRG00000011039) pard6gb (ENSCCRG00000072354) bloc1s4 (ENSCCRG00000062706) asns (ENSCCRG00000065194) sdhaf3 (ENSCCRG00000074655) c1galt1a (ENSCCRG00000081575) col28a1a (ENSCCRG00000039357) rpa3 (ENSCCRG00000080368) umad1 (ENSCCRG00000061868) glcci1a (ENSCCRG00000072157) rims3 (ENSCCRG00000040403) #22 ENSCCRG00000040422 ENSCCRG00000080637 ENSCCRG00000076438 ENSCCRG00000040439 ENSCCRG00000024721 si:ch211-195b13.1 (ENSCCRG00000025282) ENSCCRG00000069835 ENSCCRG00000076637 ENSCCRG00000058078 myo1g (ENSCCRG00000058923) si:dkeyp-92c9.2 (ENSCCRG00000066400) thbs3b (ENSCCRG00000020222) txnipa (ENSCCRG00000035169) polr3gla (ENSCCRG00000063361) ENSCCRG00000028793 Golden-line barbel MODERN SPECIES 1587 glcci1a (ENSSGRG00000020638) rims3 (ENSSGRG00000020635) #22 ptp4a3a (ENSSGRG00000020633) xkr8.3 (ENSSGRG00000020627) ENSSGRG00000020625 ENSSGRG00000020623 ENSSGRG00000020621 eya3 (ENSSGRG00000020618) ENSSGRG00000020605 myo1g (ENSSGRG00000019064) ENSSGRG00000019038 Zebrafish MODERN SPECIES 10 ints3 (ENSDARG00000016811) npr1a (ENSDARG00000031751) mylipa (ENSDARG00000008859) dtnbp1b (ENSDARG00000055206) jarid2b (ENSDARG00000062268) pard6gb (ENSDARG00000036090) bloc1s4 (ENSDARG00000007597) asns (ENSDARG00000016375) tac1 (ENSDARG00000014490) sdhaf3 (ENSDARG00000036092) c1galt1a (ENSDARG00000062278) col28a1a (ENSDARG00000077084) rpa3 (ENSDARG00000002613) umad1 (ENSDARG00000076008) glcci1a (ENSDARG00000008503) rims3 (ENSDARG00000062305) #22 ENSDARG00000103700 ptp4a3a (ENSDARG00000039997) xkr8.3 (ENSDARG00000039996) ENSDARG00000076820 ENSDARG00000004498 ENSDARG00000078841 eya3 (ENSDARG00000036100) si:ch211-195b13.1 (ENSDARG00000016623) ENSDARG00000057010 myo1g (ENSDARG00000036104) si:dkeyp-92c9.2 (ENSDARG00000036105) ENSDARG00000098950 polr3gla (ENSDARG00000012044) txnipa (ENSDARG00000036107) mtx1b (ENSDARG00000036109) Euteleosteomorpha ANCESTRAL SPECIES 546 ENSGT00940000159332 #22 ENSGT00940000158387 #27 Acanthomorphata ANCESTRAL SPECIES 49 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000156420.a.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000155884.a.d ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.e ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01010000222987 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513 ENSGT00440000035378.c.b Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.e ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01010000222987 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.e ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01010000222987 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.e ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000155356.d.b.a.a.a ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Eupercaria ANCESTRAL SPECIES 11 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT01030000234973 ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000155356.d.b.a.a.a ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Tetraodontidae ANCESTRAL SPECIES 20 ENSGT00940000158988.a.a ENSGT00940000159894 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000156906.j.b ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000160242.b ENSGT00940000154107.b ENSGT00940000154995 ENSGT00940000154337.a.b ENSGT00390000012840 ENSGT00950000183176.b.f ENSGT01030000234950 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a Fugu MODERN SPECIES 3 hoxa5a (ENSTRUG00000018252) ENSTRUG00000015974 hoxa10b (ENSTRUG00000015981) hoxa11a (ENSTRUG00000020015) hoxa13a (ENSTRUG00000016010) Evx1 (ENSTRUG00000020143) hibadha (ENSTRUG00000023488) tax1bp1a (ENSTRUG00000027936) Jazf1a (ENSTRUG00000028050) ENSTRUG00000031997 ENSTRUG00000027270 ENSTRUG00000018191 osbpl3a (ENSTRUG00000018171) ENSTRUG00000020598 nup42 (ENSTRUG00000023049) rims3 (ENSTRUG00000018155) #22 smap2 (ENSTRUG00000018144) #27 ZNF385D (ENSTRUG00000018125) ENSTRUG00000018124 kat2b (ENSTRUG00000018099) RAB5A (ENSTRUG00000032332) otud6b (ENSTRUG00000018086) runx1t1 (ENSTRUG00000001804) ENSTRUG00000030954 ENSTRUG00000029066 cibar1 (ENSTRUG00000001486) TRIB1 (ENSTRUG00000028474) rplp1 (ENSTRUG00000005235) clptm1l (ENSTRUG00000005291) trps1 (ENSTRUG00000021680) ENSTRUG00000024953 Tetraodon MODERN SPECIES 15 HOXA4 (ENSTNIG00000001755) hoxa5a (ENSTNIG00000001756) ENSTNIG00000001582 hoxa10b (ENSTNIG00000001766) hoxa11a (ENSTNIG00000001767) hoxa13a (ENSTNIG00000009207) evx1 (ENSTNIG00000000875) hibadha (ENSTNIG00000009206) tax1bp1a (ENSTNIG00000009205) jazf1a (ENSTNIG00000009204) ENSTNIG00000009203 ENSTNIG00000000262 osbpl3a (ENSTNIG00000009202) ENSTNIG00000000830 nup42 (ENSTNIG00000001691) rims3 (ENSTNIG00000009201) #22 smap2 (ENSTNIG00000009200) #27 ZNF385D (ENSTNIG00000009199) ENSTNIG00000009198 kat2b (ENSTNIG00000009197) RAB5A (ENSTNIG00000009196) otud6b (ENSTNIG00000009195) runx1t1 (ENSTNIG00000009194) cibar1 (ENSTNIG00000009193) TRIB1 (ENSTNIG00000009192) rplp1 (ENSTNIG00000009191) clptm1l (ENSTNIG00000009190) ENSTNIG00000009189 ENSTNIG00000009188 CSMD3 (ENSTNIG00000009187) tshz1 (ENSTNIG00000001441) Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT01030000234973 ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000155356.d.b.a.a.a ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Ballan wrasse MODERN SPECIES 172 hoxa5a (ENSLBEG00000001723) HOXA7 (ENSLBEG00000001798) ENSLBEG00000001814 hoxa10b (ENSLBEG00000001831) hoxa11a (ENSLBEG00000001844) hoxa13a (ENSLBEG00000001862) evx1 (ENSLBEG00000001985) hibadha (ENSLBEG00000002000) tax1bp1a (ENSLBEG00000002045) jazf1a (ENSLBEG00000002120) ENSLBEG00000002154 TRIL (ENSLBEG00000002179) osbpl3a (ENSLBEG00000002210) ENSLBEG00000002291 nup42 (ENSLBEG00000002319) rims3 (ENSLBEG00000002336) #22 ENSLBEG00000002371 trappc3 (ENSLBEG00000002379) col8a2 (ENSLBEG00000002403) ENSLBEG00000002408 ptp4a2b (ENSLBEG00000002430) ENSLBEG00000002462 ENSLBEG00000002489 Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000155356.d.b.a.a.a ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B Perciformes ANCESTRAL SPECIES 11 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h Cottioidei ANCESTRAL SPECIES 16 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h ENSGT00440000035378.c.b Stickleback MODERN SPECIES 9 hoxa5a (ENSGACG00000007108) HOXA7 (ENSGACG00000007112) ENSGACG00000007123 hoxa10b (ENSGACG00000007128) hoxa11a (ENSGACG00000007132) hoxa13a (ENSGACG00000007134) evx1 (ENSGACG00000007148) hibadha (ENSGACG00000007155) tax1bp1a (ENSGACG00000007180) jazf1a (ENSGACG00000007192) ENSGACG00000007196 TRIL (ENSGACG00000007203) osbpl3a (ENSGACG00000007208) ENSGACG00000007216 nup42 (ENSGACG00000007219) rims3 (ENSGACG00000007223) #22 smap2 (ENSGACG00000007231) #27 trappc3 (ENSGACG00000007236) col8a2 (ENSGACG00000007251) ptp4a2b (ENSGACG00000007254) ADGRB2 (ENSGACG00000007293) ENSGACG00000007310 col9a2 (ENSGACG00000007343) #28 angpt2b (ENSGACG00000007359) ENSGACG00000007372 gjb9b (ENSGACG00000007404) pef1 (ENSGACG00000007413) smim12 (ENSGACG00000007431) gja4 (ENSGACG00000007433) dlgap3 (ENSGACG00000007439) FUCA1 (ENSGACG00000007448) Lumpfish MODERN SPECIES 2 HOXA4 (ENSCLMG00005020116) hoxa5a (ENSCLMG00005020117) ENSCLMG00005020119 ENSCLMG00005020123 hoxa11a (ENSCLMG00005020127) hoxa13a (ENSCLMG00005020129) evx1 (ENSCLMG00005020130) hibadha (ENSCLMG00005020131) tax1bp1a (ENSCLMG00005020195) jazf1a (ENSCLMG00005020199) ENSCLMG00005020208 TRIL (ENSCLMG00005020211) osbpl3a (ENSCLMG00005020227) ENSCLMG00005020357 nup42 (ENSCLMG00005020358) rims3 (ENSCLMG00005020359) #22 smap2 (ENSCLMG00005020360) #27 trappc3 (ENSCLMG00005020361) col8a2 (ENSCLMG00005020362) ptp4a2b (ENSCLMG00005020363) ADGRB2 (ENSCLMG00005020378) ENSCLMG00005020473 col9a2 (ENSCLMG00005020474) #28 angpt2b (ENSCLMG00005001460) ENSCLMG00005001961 gjb9b (ENSCLMG00005002149) pef1 (ENSCLMG00005002150) smim12 (ENSCLMG00005002201) gja4 (ENSCLMG00005002202) dlgap3 (ENSCLMG00005002207) FUCA1 (ENSCLMG00005002213) Perciformes_a ANCESTRAL SPECIES 14 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h ENSGT00440000035378.c.b Channel bull blenny MODERN SPECIES 2 hoxa5a (ENSCGOG00000002402) HOXA7 (ENSCGOG00000002396) ENSCGOG00000002392 hoxa10b (ENSCGOG00000002380) hoxa11a (ENSCGOG00000002371) hoxa13a (ENSCGOG00000002368) evx1 (ENSCGOG00000002366) hibadha (ENSCGOG00000002339) tax1bp1a (ENSCGOG00000002329) jazf1a (ENSCGOG00000002320) ENSCGOG00000002307 TRIL (ENSCGOG00000002306) osbpl3a (ENSCGOG00000001403) ENSCGOG00000001326 ENSCGOG00000001319 rims3 (ENSCGOG00000001316) #22 ENSCGOG00000001313 ENSCGOG00000001310 #27 trappc3 (ENSCGOG00000001270) ENSCGOG00000007534 ENSCGOG00000007529 ptp4a2b (ENSCGOG00000007470) ENSCGOG00000007466 ADGRB2 (ENSCGOG00000007429) col9a2 (ENSCGOG00000007425) #28 ENSCGOG00000007423 angpt2b (ENSCGOG00000007387) ENSCGOG00000006780 ENSCGOG00000006739 ENSCGOG00000006735 ENSCGOG00000006733 Pike perch MODERN SPECIES 41 hoxa5a (ENSSLUG00000011216) HOXA7 (ENSSLUG00000011211) ENSSLUG00000011207 ENSSLUG00000011201 hoxa11a (ENSSLUG00000011196) hoxa13a (ENSSLUG00000011191) evx1 (ENSSLUG00000011184) hibadha (ENSSLUG00000011037) tax1bp1a (ENSSLUG00000011017) jazf1a (ENSSLUG00000010981) ENSSLUG00000010975 TRIL (ENSSLUG00000010971) osbpl3a (ENSSLUG00000009717) ENSSLUG00000009633 ENSSLUG00000009628 rims3 (ENSSLUG00000009621) #22 smap2 (ENSSLUG00000009617) #27 trappc3 (ENSSLUG00000009611) ENSSLUG00000009603 ptp4a2b (ENSSLUG00000009593) ADGRB2 (ENSSLUG00000008980) col9a2 (ENSSLUG00000008924) #28 angpt2b (ENSSLUG00000008890) ENSSLUG00000008651 gjb9b (ENSSLUG00000008567) pef1 (ENSSLUG00000008364) smim12 (ENSSLUG00000008345) gja4 (ENSSLUG00000008342) dlgap3 (ENSSLUG00000008326) FUCA1 (ENSSLUG00000008314) fuca1.2 (ENSSLUG00000008308) Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000155356.d.b.a.a.a ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h Gilthead seabream MODERN SPECIES 17 hoxa5a (ENSSAUG00010023117) HOXA7 (ENSSAUG00010023118) ENSSAUG00010023119 hoxa10b (ENSSAUG00010023121) hoxa11a (ENSSAUG00010023122) hoxa13a (ENSSAUG00010023123) evx1 (ENSSAUG00010023124) hibadha (ENSSAUG00010023125) tax1bp1a (ENSSAUG00010023127) jazf1a (ENSSAUG00010023128) ENSSAUG00010023129 TRIL (ENSSAUG00010023131) osbpl3a (ENSSAUG00010023135) ENSSAUG00010023175 nup42 (ENSSAUG00010023177) rims3 (ENSSAUG00010023178) #22 smap2 (ENSSAUG00010023179) #27 trappc3 (ENSSAUG00010023182) col8a2 (ENSSAUG00010023183) ptp4a2b (ENSSAUG00010023184) ADGRB2 (ENSSAUG00010000425) ENSSAUG00010002400 col9a2 (ENSSAUG00010002404) #28 angpt2b (ENSSAUG00010002424) ENSSAUG00010002451 ENSSAUG00010002481 ENSSAUG00010003803 gjb9b (ENSSAUG00010003804) pef1 (ENSSAUG00010003805) smim12 (ENSSAUG00010003808) gja4 (ENSSAUG00010003809) Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000155356.d.b.a.a.a ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h European seabass MODERN SPECIES 22 HOXA4 (ENSDLAG00005027508) HOXA7 (ENSDLAG00005032717) ENSDLAG00005033816 ENSDLAG00005019887 hoxa11a (ENSDLAG00005019880) hoxa13a (ENSDLAG00005019876) evx1 (ENSDLAG00005032633) hibadha (ENSDLAG00005019778) tax1bp1a (ENSDLAG00005019739) jazf1a (ENSDLAG00005032768) ENSDLAG00005019707 TRIL (ENSDLAG00005033461) ENSDLAG00005019468 ENSDLAG00005019463 ENSDLAG00005019459 ENSDLAG00005033407 #22 ENSDLAG00005019451 #27 trappc3 (ENSDLAG00005019448) ENSDLAG00005019445 ptp4a2b (ENSDLAG00005019420) ENSDLAG00005018728 ENSDLAG00005029100 col9a2 (ENSDLAG00005026861) #28 angpt2b (ENSDLAG00005018644) ENSDLAG00005018620 ENSDLAG00005015894 gjb9b (ENSDLAG00005015791) pef1 (ENSDLAG00005015743) smim12 (ENSDLAG00005034558) gja4 (ENSDLAG00005033262) dlgap3 (ENSDLAG00005015722) Large yellow croaker MODERN SPECIES 484 hoxa5a (ENSLCRG00005008888) HOXA7 (ENSLCRG00005008884) ENSLCRG00005008882 ENSLCRG00005008877 hoxa11a (ENSLCRG00005008876) hoxa13a (ENSLCRG00005008874) evx1 (ENSLCRG00005008873) hibadha (ENSLCRG00005008807) tax1bp1a (ENSLCRG00005008801) jazf1a (ENSLCRG00005008799) ENSLCRG00005008798 TRIL (ENSLCRG00005008796) osbpl3a (ENSLCRG00005008414) ENSLCRG00005008401 nup42 (ENSLCRG00005008398) rims3 (ENSLCRG00005008396) #22 ENSLCRG00005008394 trappc3 (ENSLCRG00005008389) col8a2 (ENSLCRG00005008388) ptp4a2b (ENSLCRG00005008384) ADGRB2 (ENSLCRG00005006445) ENSLCRG00005006428 col9a2 (ENSLCRG00005006425) #28 angpt2b (ENSLCRG00005006393) ENSLCRG00005001081 gjb9b (ENSLCRG00005000674) pef1 (ENSLCRG00005000668) pef1 (ENSLCRG00005000660) smim12 (ENSLCRG00005000658) ENSLCRG00005000655 dlgap3 (ENSLCRG00005013270) Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.e ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000155356.d.b.a.a.a ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Anabantaria ANCESTRAL SPECIES 16 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h ENSGT00440000035378.c.b ENSGT00940000154994.b ENSGT00940000166437 Zig-zag eel MODERN SPECIES 2 HOXA7 (ENSMAMG00000027947) ENSMAMG00000025324 ENSMAMG00000007899 ENSMAMG00000007887 hoxa11a (ENSMAMG00000007883) ENSMAMG00000007871 evx1 (ENSMAMG00000007854) hibadha (ENSMAMG00000007830) tax1bp1a (ENSMAMG00000007765) JAZF1 (ENSMAMG00000027007) ENSMAMG00000007742 TRIL (ENSMAMG00000007728) ENSMAMG00000007664 ENSMAMG00000007640 ENSMAMG00000007625 ENSMAMG00000007605 #22 ENSMAMG00000007594 #27 trappc3 (ENSMAMG00000025439) ENSMAMG00000027164 ptp4a2b (ENSMAMG00000007525) ENSMAMG00000007256 angpt2b (ENSMAMG00000007116) ENSMAMG00000006957 gjb9b (ENSMAMG00000028467) pef1 (ENSMAMG00000006927) smim12 (ENSMAMG00000006919) gja4 (ENSMAMG00000006907) dlgap3 (ENSMAMG00000006613) ENSMAMG00000006579 ENSMAMG00000006567 ENSMAMG00000006539 Anabantoidei ANCESTRAL SPECIES 19 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h ENSGT00440000035378.c.b ENSGT00940000154994.b ENSGT00940000166437 Siamese fighting fish MODERN SPECIES 2 hoxa3a (ENSBSLG00000011839) HOXA4 (ENSBSLG00000011815) hoxa5a (ENSBSLG00000011797) HOXA7 (ENSBSLG00000011758) hoxa11a (ENSBSLG00000011737) hoxa13a (ENSBSLG00000011697) evx1 (ENSBSLG00000011641) ENSBSLG00000011586 hibadha (ENSBSLG00000010856) tax1bp1a (ENSBSLG00000010674) jazf1a (ENSBSLG00000010180) TRIL (ENSBSLG00000010166) osbpl3a (ENSBSLG00000009971) ENSBSLG00000009937 nup42 (ENSBSLG00000009916) rims3 (ENSBSLG00000009887) #22 smap2 (ENSBSLG00000009858) #27 trappc3 (ENSBSLG00000009810) ENSBSLG00000009795 ptp4a2b (ENSBSLG00000009712) ENSBSLG00000009376 ADGRB2 (ENSBSLG00000007960) angpt2b (ENSBSLG00000007679) ENSBSLG00000006903 gjb9b (ENSBSLG00000005789) ENSBSLG00000005784 pef1 (ENSBSLG00000005406) smim12 (ENSBSLG00000005351) gja4 (ENSBSLG00000005331) dlgap3 (ENSBSLG00000005280) FUCA1 (ENSBSLG00000005232) Climbing perch MODERN SPECIES 2 HOXA4 (ENSATEG00000028592) hoxa5a (ENSATEG00000001828) ENSATEG00000001859 ENSATEG00000001918 hoxa11a (ENSATEG00000001926) ENSATEG00000026862 evx1 (ENSATEG00000001945) hibadha (ENSATEG00000001998) tax1bp1a (ENSATEG00000002002) JAZF1 (ENSATEG00000002071) ENSATEG00000002087 TRIL (ENSATEG00000029886) ENSATEG00000002124 ENSATEG00000002213 ENSATEG00000002228 ENSATEG00000002280 #22 ENSATEG00000029594 trappc3 (ENSATEG00000026325) ENSATEG00000025493 ptp4a2b (ENSATEG00000002362) ENSATEG00000002408 angpt2b (ENSATEG00000002633) ENSATEG00000002672 gjb9b (ENSATEG00000026370) pef1 (ENSATEG00000003027) smim12 (ENSATEG00000003036) gja4 (ENSATEG00000029097) ENSATEG00000027095 dlgap3 (ENSATEG00000025413) ENSATEG00000003162 ENSATEG00000003167 Carangaria ANCESTRAL SPECIES 14 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.e ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000155356.d.b.a.a.a ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Pleuronectoidei ANCESTRAL SPECIES 15 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h ENSGT00440000035378.c.b Tongue sole MODERN SPECIES 9 hoxa5a (ENSCSEG00000014317) HOXA7 (ENSCSEG00000014312) ENSCSEG00000014310 hoxa10b (ENSCSEG00000014301) hoxa11a (ENSCSEG00000014288) hoxa13a (ENSCSEG00000014281) evx1 (ENSCSEG00000014267) hibadha (ENSCSEG00000014257) tax1bp1a (ENSCSEG00000014240) jazf1a (ENSCSEG00000014225) ENSCSEG00000014203 TRIL (ENSCSEG00000014180) osbpl3a (ENSCSEG00000014147) ENSCSEG00000014132 nup42 (ENSCSEG00000014125) rims3 (ENSCSEG00000014116) #22 smap2 (ENSCSEG00000014107) #27 trappc3 (ENSCSEG00000014099) col8a2 (ENSCSEG00000014092) ptp4a2b (ENSCSEG00000014069) ENSCSEG00000014060 ADGRB2 (ENSCSEG00000013908) ENSCSEG00000013862 col9a2 (ENSCSEG00000013847) #28 angpt2b (ENSCSEG00000013838) ENSCSEG00000013783 gjb9b (ENSCSEG00000013765) ENSCSEG00000013760 pef1 (ENSCSEG00000013754) smim12 (ENSCSEG00000013748) gja4 (ENSCSEG00000013743) Turbot DUPLICATION Turbot MODERN SPECIES 14 ENSSMAG00000037197 #22 ENSSMAG00000034474 trappc3 (ENSSMAG00000015404) ENSSMAG00000015386 ENSSMAG00000017888 ptp4a2b (ENSSMAG00000017865) ENSSMAG00000035107 ENSSMAG00000017858 ENSSMAG00000036183 ENSSMAG00000029353 ENSSMAG00000029130 ENSSMAG00000017831 ENSSMAG00000017840 ENSSMAG00000015825 ENSSMAG00000016298 #28 angpt2b (ENSSMAG00000016430) Turbot MODERN SPECIES 3 ENSSMAG00000018656 ENSSMAG00000018666 ENSSMAG00000023652 ENSSMAG00000018691 ENSSMAG00000029796 ENSSMAG00000018735 SZT2 (ENSSMAG00000018747) hyi (ENSSMAG00000018790) ptprfa (ENSSMAG00000036071) ENSSMAG00000034089 st3gal3a (ENSSMAG00000030052) ENSSMAG00000037156 rad54l (ENSSMAG00000025409) ENSSMAG00000027470 ENSSMAG00000028775 ENSSMAG00000027812 #22 ENSSMAG00000023143 #27 trappc3 (ENSSMAG00000035435) ENSSMAG00000015363 ENSSMAG00000034336 ptp4a2b (ENSSMAG00000027250) ENSSMAG00000022390 ENSSMAG00000025201 ENSSMAG00000034351 ENSSMAG00000036585 ENSSMAG00000029540 ENSSMAG00000023931 ENSSMAG00000029753 ENSSMAG00000004158 ENSSMAG00000004170 ENSSMAG00000004187 Carangaria_A ANCESTRAL SPECIES 16 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab.b ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.e ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000155356.d.b.a.a.a ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Barramundi perch MODERN SPECIES 3 HOXA7 (ENSLCAG00010016662) ENSLCAG00010016661 hoxa10b (ENSLCAG00010016658) hoxa11a (ENSLCAG00010016655) hoxa13a (ENSLCAG00010016654) evx1 (ENSLCAG00010016651) hibadha (ENSLCAG00010016611) ENSLCAG00010016602 tax1bp1a (ENSLCAG00010016597) jazf1a (ENSLCAG00010016593) ENSLCAG00010016589 TRIL (ENSLCAG00010016586) osbpl3a (ENSLCAG00010016439) ENSLCAG00010016392 nup42 (ENSLCAG00010016376) rims3 (ENSLCAG00010016368) #22 smap2 (ENSLCAG00010016361) #27 trappc3 (ENSLCAG00010016343) ENSLCAG00010016339 col8a2 (ENSLCAG00010016337) ptp4a2b (ENSLCAG00010016327) ADGRB2 (ENSLCAG00010016146) ENSLCAG00010016090 Seriola ANCESTRAL SPECIES 12 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab.b ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.e ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h ENSGT00440000035378.c.b Greater amberjack MODERN SPECIES 48 hoxa5a (ENSSDUG00000004737) HOXA7 (ENSSDUG00000004723) ENSSDUG00000004714 hoxa11a (ENSSDUG00000004669) hoxa10b (ENSSDUG00000004658) hoxa13a (ENSSDUG00000004612) evx1 (ENSSDUG00000004583) hibadha (ENSSDUG00000004564) tax1bp1a (ENSSDUG00000004489) jazf1a (ENSSDUG00000004450) ENSSDUG00000004437 TRIL (ENSSDUG00000004429) osbpl3a (ENSSDUG00000004357) ENSSDUG00000004322 nup42 (ENSSDUG00000004296) rims3 (ENSSDUG00000004261) #22 smap2 (ENSSDUG00000004248) #27 trappc3 (ENSSDUG00000004221) col8a2 (ENSSDUG00000004214) ptp4a2b (ENSSDUG00000004204) ADGRB2 (ENSSDUG00000003886) col9a2 (ENSSDUG00000003739) #28 angpt2b (ENSSDUG00000003697) ENSSDUG00000003547 gjb9b (ENSSDUG00000003518) pef1 (ENSSDUG00000003496) smim12 (ENSSDUG00000003486) gja4 (ENSSDUG00000003475) dlgap3 (ENSSDUG00000003361) FUCA1 (ENSSDUG00000003307) fuca1.2 (ENSSDUG00000003274) Yellowtail amberjack MODERN SPECIES 3204 hoxa5a (ENSSLDG00000006039) HOXA7 (ENSSLDG00000006049) ENSSLDG00000006063 hoxa10b (ENSSLDG00000006083) hoxa11a (ENSSLDG00000006095) hoxa13a (ENSSLDG00000006148) evx1 (ENSSLDG00000006166) hibadha (ENSSLDG00000006181) tax1bp1a (ENSSLDG00000006207) jazf1a (ENSSLDG00000006230) ENSSLDG00000006258 ENSSLDG00000006275 osbpl3a (ENSSLDG00000006313) ENSSLDG00000006408 nup42 (ENSSLDG00000006438) rims3 (ENSSLDG00000006487) #22 smap2 (ENSSLDG00000006519) #27 trappc3 (ENSSLDG00000006549) col8a2 (ENSSLDG00000006572) ptp4a2b (ENSSLDG00000006586) ADGRB2 (ENSSLDG00000006685) ENSSLDG00000006999 col9a2 (ENSSLDG00000007132) #28 angpt2b (ENSSLDG00000007186) ENSSLDG00000007262 gjb9b (ENSSLDG00000007469) pef1 (ENSSLDG00000007504) smim12 (ENSSLDG00000007532) gja4 (ENSSLDG00000007542) dlgap3 (ENSSLDG00000007558) FUCA1 (ENSSLDG00000007578) Ovalentaria ANCESTRAL SPECIES 12 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.e ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01010000222987 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.e ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000235399 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.e ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000235399 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000235399 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B Mangrove rivulus MODERN SPECIES 2 hoxa5a (ENSKMAG00000018990) HOXA7 (ENSKMAG00000018979) ENSKMAG00000018970 hoxa10b (ENSKMAG00000018961) hoxa11a (ENSKMAG00000018955) hoxa13a (ENSKMAG00000018947) evx1 (ENSKMAG00000018913) hibadha (ENSKMAG00000018892) tax1bp1a (ENSKMAG00000018833) jazf1a (ENSKMAG00000018788) ENSKMAG00000018769 TRIL (ENSKMAG00000018754) osbpl3a (ENSKMAG00000018663) ENSKMAG00000018632 nup42 (ENSKMAG00000018611) rims3 (ENSKMAG00000018578) #22 ENSKMAG00000018554 trappc3 (ENSKMAG00000018518) ENSKMAG00000018503 col8a2 (ENSKMAG00000018490) ptp4a2b (ENSKMAG00000018464) ADGRB2 (ENSKMAG00000018384) col9a2 (ENSKMAG00000018326) #28 angpt2b (ENSKMAG00000018251) ENSKMAG00000018094 ENSKMAG00000018061 gjb9b (ENSKMAG00000018047) pef1 (ENSKMAG00000018032) smim12 (ENSKMAG00000018017) gja4 (ENSKMAG00000017974) dlgap3 (ENSKMAG00000017947) Turquoise killifish MODERN SPECIES 1618 ENSNFUG00015005887 hoxa10b (ENSNFUG00015005892) hoxa11a (ENSNFUG00015005895) hoxa13a (ENSNFUG00015005897) evx1 (ENSNFUG00015005899) HIBADHA (ENSNFUG00015005906) tax1bp1a (ENSNFUG00015005921) jazf1a (ENSNFUG00015005952) ENSNFUG00015005958 ENSNFUG00015005960 TRIL (ENSNFUG00015005963) OSBPL3A (ENSNFUG00015005984) ENSNFUG00015006076 ENSNFUG00015006081 NUPL2 (ENSNFUG00015006085) RIMS3 (ENSNFUG00015006090) #22 smap2 (ENSNFUG00015006095) #27 TRAPPC3 (ENSNFUG00015006104) COL8A2 (ENSNFUG00015006115) PTP4A2 (ENSNFUG00015006124) ENSNFUG00015006150 ENSNFUG00015006155 ENSNFUG00015006159 ENSNFUG00015006163 ENSNFUG00015006169 ENSNFUG00015006173 ENSNFUG00015006178 ENSNFUG00015006185 ADGRB2 (ENSNFUG00015006220) ENSNFUG00015006333 COL9A2 (ENSNFUG00015006337) #28 Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.e ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B Poeciliinae ANCESTRAL SPECIES 18 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000155884.a.d ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B Poecilia ANCESTRAL SPECIES 24 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000155884.a.d ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B NAME_6 ANCESTRAL SPECIES 131 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a Amazon molly MODERN SPECIES 389 hoxa5a (ENSPFOG00000002629) HOXA7 (ENSPFOG00000002599) ENSPFOG00000002585 hoxa10b (ENSPFOG00000002523) hoxa11a (ENSPFOG00000024708) hoxa13a (ENSPFOG00000002494) evx1 (ENSPFOG00000002469) hibadha (ENSPFOG00000002325) tax1bp1a (ENSPFOG00000002209) jazf1a (ENSPFOG00000002162) ENSPFOG00000002064 TRIL (ENSPFOG00000020428) osbpl3a (ENSPFOG00000001768) ENSPFOG00000001659 nup42 (ENSPFOG00000001612) rims3 (ENSPFOG00000001562) #22 ENSPFOG00000001480 trappc3 (ENSPFOG00000001402) col8a2 (ENSPFOG00000001371) ptp4a2b (ENSPFOG00000001334) Sailfin molly MODERN SPECIES 141 hoxa5a (ENSPLAG00000021936) HOXA7 (ENSPLAG00000021952) ENSPLAG00000021989 ENSPLAG00000022003 hoxa11a (ENSPLAG00000022048) hoxa13a (ENSPLAG00000022061) evx1 (ENSPLAG00000022075) hibadha (ENSPLAG00000022107) tax1bp1a (ENSPLAG00000022213) jazf1a (ENSPLAG00000022239) ENSPLAG00000022243 TRIL (ENSPLAG00000022255) osbpl3a (ENSPLAG00000022345) ENSPLAG00000022362 nup42 (ENSPLAG00000022371) rims3 (ENSPLAG00000022389) #22 smap2 (ENSPLAG00000022418) #27 trappc3 (ENSPLAG00000022436) Guppy MODERN SPECIES 441 HOXA4 (ENSPREG00000000563) hoxa5a (ENSPREG00000021725) ENSPREG00000021719 hoxa10b (ENSPREG00000021717) hoxa11a (ENSPREG00000021710) hoxa13a (ENSPREG00000021694) evx1 (ENSPREG00000021672) hibadha (ENSPREG00000021657) tax1bp1a (ENSPREG00000021617) jazf1a (ENSPREG00000021580) ENSPREG00000021553 TRIL (ENSPREG00000021545) osbpl3a (ENSPREG00000021509) ENSPREG00000021480 nup42 (ENSPREG00000021471) rims3 (ENSPREG00000021462) #22 ENSPREG00000021452 trappc3 (ENSPREG00000021442) ENSPREG00000021432 col8a2 (ENSPREG00000021429) ptp4a2b (ENSPREG00000021409) ENSPREG00000021389 ADGRB2 (ENSPREG00000021037) ENSPREG00000020643 col9a2 (ENSPREG00000020537) #28 angpt2b (ENSPREG00000020513) ENSPREG00000020391 pef1 (ENSPREG00000020293) gja4 (ENSPREG00000020288) smim12 (ENSPREG00000020278) si:dkey-81h8.1 (ENSPREG00000020260) Platyfish MODERN SPECIES 4 hoxa5a (ENSXMAG00000001054) HOXA7 (ENSXMAG00000026689) ENSXMAG00000001057 hoxa10b (ENSXMAG00000029054) hoxa11a (ENSXMAG00000027852) hoxa13a (ENSXMAG00000001062) evx1 (ENSXMAG00000028620) hibadha (ENSXMAG00000027716) tax1bp1a (ENSXMAG00000010881) jazf1a (ENSXMAG00000025678) ENSXMAG00000001066 ENSXMAG00000020864 osbpl3a (ENSXMAG00000001083) ENSXMAG00000010652 nup42 (ENSXMAG00000010651) rims3 (ENSXMAG00000010647) #22 ENSXMAG00000010637 trappc3 (ENSXMAG00000010634) col8a2 (ENSXMAG00000029783) ptp4a2b (ENSXMAG00000028788) ADGRB2 (ENSXMAG00000010598) col9a2 (ENSXMAG00000010479) #28 angpt2b (ENSXMAG00000010460) ENSXMAG00000010387 ENSXMAG00000026814 gjb9b (ENSXMAG00000024312) gjb9b (ENSXMAG00000008062) pef1 (ENSXMAG00000008164) smim12 (ENSXMAG00000019467) gja4 (ENSXMAG00000008163) ENSXMAG00000029280 NAME_4 ANCESTRAL SPECIES 107 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a Mummichog MODERN SPECIES 2329 hoxa5a (ENSFHEG00000013822) HOXA7 (ENSFHEG00000013819) ENSFHEG00000013809 hoxa10b (ENSFHEG00000013805) hoxa11a (ENSFHEG00000013797) hoxa13a (ENSFHEG00000013789) evx1 (ENSFHEG00000013781) hibadha (ENSFHEG00000013773) tax1bp1a (ENSFHEG00000013748) jazf1a (ENSFHEG00000013733) ENSFHEG00000013720 TRIL (ENSFHEG00000013715) osbpl3a (ENSFHEG00000013709) ENSFHEG00000013700 nup42 (ENSFHEG00000013692) rims3 (ENSFHEG00000013684) #22 smap2 (ENSFHEG00000013666) #27 trappc3 (ENSFHEG00000013629) col8a2 (ENSFHEG00000000321) ptp4a2b (ENSFHEG00000013610) Sheepshead minnow MODERN SPECIES 210 hoxa5a (ENSCVAG00000010032) HOXA7 (ENSCVAG00000010047) ENSCVAG00000010053 hoxa10b (ENSCVAG00000010058) hoxa11a (ENSCVAG00000010064) hoxa13a (ENSCVAG00000010073) evx1 (ENSCVAG00000010081) hibadha (ENSCVAG00000010129) tax1bp1a (ENSCVAG00000000881) jazf1a (ENSCVAG00000010159) ENSCVAG00000010172 ENSCVAG00000010188 osbpl3a (ENSCVAG00000010263) ENSCVAG00000010274 ENSCVAG00000010294 rims3 (ENSCVAG00000010314) #22 ENSCVAG00000010322 trappc3 (ENSCVAG00000010339) col8a2 (ENSCVAG00000010343) ptp4a2b (ENSCVAG00000010356) Oryzias ANCESTRAL SPECIES 22 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h ENSGT00390000001663.n ENSGT00390000007888 Oryzias_b ANCESTRAL SPECIES 22 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h Indian medaka MODERN SPECIES 3 hoxa5a (ENSOMEG00000018736) HOXA7 (ENSOMEG00000018749) ENSOMEG00000018763 hoxa10b (ENSOMEG00000000716) hoxa11a (ENSOMEG00000018787) hoxa13a (ENSOMEG00000018800) evx1 (ENSOMEG00000018828) hibadha (ENSOMEG00000018845) tax1bp1a (ENSOMEG00000018894) jazf1a (ENSOMEG00000018946) ENSOMEG00000018974 TRIL (ENSOMEG00000018990) osbpl3a (ENSOMEG00000019036) ENSOMEG00000019056 nup42 (ENSOMEG00000019078) rims3 (ENSOMEG00000019104) #22 smap2 (ENSOMEG00000019127) #27 trappc3 (ENSOMEG00000019153) col8a2 (ENSOMEG00000019173) ptp4a2b (ENSOMEG00000000709) ADGRB2 (ENSOMEG00000019659) ENSOMEG00000019725 col9a2 (ENSOMEG00000019788) #28 angpt2b (ENSOMEG00000019810) ENSOMEG00000019990 gjb9b (ENSOMEG00000020073) pef1 (ENSOMEG00000000983) smim12 (ENSOMEG00000020100) gja4 (ENSOMEG00000020105) dlgap3 (ENSOMEG00000020146) Javanese ricefish MODERN SPECIES 2 hoxa5a (ENSOJAG00000003979) HOXA7 (ENSOJAG00000003886) ENSOJAG00000003848 hoxa10b (ENSOJAG00000003838) hoxa11a (ENSOJAG00000003810) hoxa13a (ENSOJAG00000003786) evx1 (ENSOJAG00000003773) hibadha (ENSOJAG00000003690) tax1bp1a (ENSOJAG00000003658) jazf1a (ENSOJAG00000003619) ENSOJAG00000003593 TRIL (ENSOJAG00000003583) osbpl3a (ENSOJAG00000003244) ENSOJAG00000003225 nup42 (ENSOJAG00000003218) rims3 (ENSOJAG00000003209) #22 smap2 (ENSOJAG00000003200) #27 trappc3 (ENSOJAG00000003187) col8a2 (ENSOJAG00000003180) ptp4a2b (ENSOJAG00000003148) ENSOJAG00000003133 ENSOJAG00000003128 cacng7a (ENSOJAG00000003117) cacng8a (ENSOJAG00000003100) cacng6a (ENSOJAG00000003092) ENSOJAG00000003086 ENSOJAG00000003081 slc2a3a (ENSOJAG00000003050) ENSOJAG00000003019 ENSOJAG00000003000 clcn1a (ENSOJAG00000002727) Oryzias_a ANCESTRAL SPECIES 30 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h ENSGT00390000001663.n ENSGT00390000007888 Chinese medaka MODERN SPECIES 1110 HOXA4 (ENSOSIG00000010142) hoxa5a (ENSOSIG00000010140) HOXA7 (ENSOSIG00000010138) ENSOSIG00000010135 hoxa10b (ENSOSIG00000010133) hoxa11a (ENSOSIG00000010131) hoxa13a (ENSOSIG00000010129) evx1 (ENSOSIG00000010128) hibadha (ENSOSIG00000010076) tax1bp1a (ENSOSIG00000010075) jazf1a (ENSOSIG00000010073) ENSOSIG00000010072 TRIL (ENSOSIG00000010071) osbpl3a (ENSOSIG00000008712) nup42 (ENSOSIG00000008711) rims3 (ENSOSIG00000008710) #22 ENSOSIG00000008709 #27 smap2 (ENSOSIG00000008708) #27 trappc3 (ENSOSIG00000008706) col8a2 (ENSOSIG00000008704) ptp4a2b (ENSOSIG00000008680) Japanese Medaka HdrR MODERN SPECIES 2 HOXA7 (ENSORLG00000023188) hoxa9a (ENSORLG00000027463) ENSORLG00000005034 hoxa11a (ENSORLG00000005037) hoxa13a (ENSORLG00000005043) evx1 (ENSORLG00000005050) hibadha (ENSORLG00000005067) tax1bp1a (ENSORLG00000005098) ENSORLG00000023632 jazf1a (ENSORLG00000005107) ENSORLG00000005125 TRIL (ENSORLG00000005131) osbpl3a (ENSORLG00000005177) ENSORLG00000005186 nup42 (ENSORLG00000027168) rims3 (ENSORLG00000005207) #22 smap2 (ENSORLG00000028329) #27 trappc3 (ENSORLG00000030170) col8a2 (ENSORLG00000005237) ptp4a2b (ENSORLG00000005261) ENSORLG00000024462 col9a2 (ENSORLG00000005372) #28 angpt2b (ENSORLG00000005397) ENSORLG00000030437 ENSORLG00000005493 ENSORLG00000021840 gjb9b (ENSORLG00000005510) pef1 (ENSORLG00000005514) smim12 (ENSORLG00000023769) gja4 (ENSORLG00000027847) dlgap3 (ENSORLG00000005540) Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01010000222987 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B Pomacentridae ANCESTRAL SPECIES 7 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000155884.a.d ENSGT00390000003880.b.a ENSGT00960000186902 ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01010000222987 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000155884.a.d ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00960000186902 ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01010000222987 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B Amphiprion ANCESTRAL SPECIES 16 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000155884.a.d ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01010000222987 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h ENSGT00440000035378.c.b Orange clownfish MODERN SPECIES 8 HOXA7 (ENSAPEG00000019614) ENSAPEG00000019634 hoxa10b (ENSAPEG00000019646) hoxa11a (ENSAPEG00000019676) hoxa13a (ENSAPEG00000019685) evx1 (ENSAPEG00000019743) hibadha (ENSAPEG00000019757) tax1bp1a (ENSAPEG00000019804) jazf1a (ENSAPEG00000019873) ENSAPEG00000019890 ENSAPEG00000019901 TRIL (ENSAPEG00000019911) osbpl3a (ENSAPEG00000019934) ENSAPEG00000019986 nup42 (ENSAPEG00000020008) rims3 (ENSAPEG00000020030) #22 ENSAPEG00000020083 trappc3 (ENSAPEG00000020098) col8a2 (ENSAPEG00000020124) ptp4a2b (ENSAPEG00000020140) ADGRB2 (ENSAPEG00000020201) col9a2 (ENSAPEG00000020325) #28 angpt2b (ENSAPEG00000020515) ENSAPEG00000020538 ENSAPEG00000020741 gjb9b (ENSAPEG00000020753) pef1 (ENSAPEG00000020782) smim12 (ENSAPEG00000020967) gja4 (ENSAPEG00000020977) dlgap3 (ENSAPEG00000020983) ENSAPEG00000021062 Clown anemonefish MODERN SPECIES 1052 hoxa5a (ENSAOCG00000020522) HOXA7 (ENSAOCG00000020541) ENSAOCG00000020575 hoxa11a (ENSAOCG00000020636) hoxa13a (ENSAOCG00000020728) evx1 (ENSAOCG00000020769) hoxa10b (ENSAOCG00000001942) hibadha (ENSAOCG00000020824) tax1bp1a (ENSAOCG00000020906) jazf1a (ENSAOCG00000002494) ENSAOCG00000020977 TRIL (ENSAOCG00000021002) osbpl3a (ENSAOCG00000021114) ENSAOCG00000021132 nup42 (ENSAOCG00000021141) rims3 (ENSAOCG00000021180) #22 ENSAOCG00000021189 trappc3 (ENSAOCG00000021217) col8a2 (ENSAOCG00000021228) ptp4a2b (ENSAOCG00000021271) ADGRB2 (ENSAOCG00000021381) ENSAOCG00000021397 col9a2 (ENSAOCG00000021596) #28 Spiny chromis MODERN SPECIES 10 hoxa5a (ENSAPOG00000021214) HOXA7 (ENSAPOG00000021207) ENSAPOG00000021169 hoxa10b (ENSAPOG00000021132) hoxa11a (ENSAPOG00000021108) hoxa13a (ENSAPOG00000021038) evx1 (ENSAPOG00000000596) hibadha (ENSAPOG00000020887) tax1bp1a (ENSAPOG00000020841) JAZF1 (ENSAPOG00000020760) ENSAPOG00000020725 TRIL (ENSAPOG00000020703) osbpl3a (ENSAPOG00000020643) ENSAPOG00000020527 nup42 (ENSAPOG00000020514) rims3 (ENSAPOG00000020491) #22 ENSAPOG00000020458 trappc3 (ENSAPOG00000020444) col8a2 (ENSAPOG00000020410) ENSAPOG00000020399 ptp4a2b (ENSAPOG00000020372) ADGRB2 (ENSAPOG00000020293) ENSAPOG00000020049 col9a2 (ENSAPOG00000020035) #28 ENSAPOG00000019937 angpt2b (ENSAPOG00000019920) ENSAPOG00000019903 Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 1832 jazf1a (ENSSPAG00000002568) ENSSPAG00000002596 TRIL (ENSSPAG00000002614) osbpl3a (ENSSPAG00000002673) ENSSPAG00000002787 nup42 (ENSSPAG00000002802) rims3 (ENSSPAG00000002820) #22 Bicolor damselfish MODERN SPECIES 608 rims3 (ENSSPAG00000004289) #22 smap2 (ENSSPAG00000004273) #27 trappc3 (ENSSPAG00000004250) ENSSPAG00000004228 col8a2 (ENSSPAG00000004218) ptp4a2b (ENSSPAG00000004204) ENSSPAG00000004178 Cichlidae ANCESTRAL SPECIES 7 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00960000186902 ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000235399 ENSGT00990000205563 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000155884.a.d ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000235399 ENSGT00990000205563 ENSGT01030000234513.A.a.a.a.b.d.a ENSGT00940000155722 ENSGT00390000009435 Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000235399 ENSGT00990000205563 ENSGT01030000234513.A.a.a.a.b.d.a.i ENSGT01030000234513.A.a.a.a.b.d.a.j ENSGT00940000155722 ENSGT00390000009435 Haplochromini ANCESTRAL SPECIES 5 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000155884.a.d ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT00990000205563 ENSGT01030000234513.A.a.a.a.b.d.a.i ENSGT01030000234513.A.a.a.a.b.d.a.j ENSGT00940000155722 ENSGT00390000009435 Burton s mouthbrooder MODERN SPECIES 882 rims3 (ENSHBUG00000002420) #22 ENSHBUG00000002436 trappc3 (ENSHBUG00000002447) col8a2 (ENSHBUG00000002458) ptp4a2b (ENSHBUG00000000042) Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000155884.a.d ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000158302.d.b ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT01030000234513.A.a.a.a.b.d.a.i ENSGT00990000205563 ENSGT01030000234513.A.a.a.a.b.d.a.j ENSGT00940000155722 ENSGT00390000009435 Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00940000159894 ENSGT00940000161013 ENSGT00940000166648 ENSGT00940000163268.d.a ENSGT00940000158311.a ENSGT00940000164071.b.b ENSGT00940000159854 ENSGT00940000165581 ENSGT00950000183025.b.a.ab ENSGT00390000003635.g ENSGT00940000155261.b ENSGT00940000161975 ENSGT00940000155957.b ENSGT00940000155880.f ENSGT00390000000118 ENSGT00940000159332 #22 ENSGT00940000155884.a.d ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00940000154383.a ENSGT00940000160103 ENSGT00940000161290 #28 ENSGT00940000164972 ENSGT00940000161110.a.b ENSGT00990000205563 ENSGT01030000234513.A.a.a.a.b.d.a.i ENSGT01030000234513.A.a.a.a.b.d.a.j ENSGT00940000155722 ENSGT00390000009435 ENSGT01090000260070.B ENSGT00940000159513.h Zebra mbuna MODERN SPECIES 1104 hoxa5a (ENSMZEG00005010174) HOXA7 (ENSMZEG00005010189) ENSMZEG00005010211 hoxa10b (ENSMZEG00005010234) hoxa11a (ENSMZEG00005010243) hoxa13a (ENSMZEG00005010249) evx1 (ENSMZEG00005010281) hibadha (ENSMZEG00005010300) tax1bp1a (ENSMZEG00005010312) jazf1a (ENSMZEG00005010334) ENSMZEG00005010360 TRIL (ENSMZEG00005010370) osbpl3a (ENSMZEG00005010389) ENSMZEG00005010434 nup42 (ENSMZEG00005010447) rims3 (ENSMZEG00005010454) #22 ENSMZEG00005010474 trappc3 (ENSMZEG00005010494) col8a2 (ENSMZEG00005010509) ptp4a2b (ENSMZEG00005010525) ENSMZEG00005010549 ADGRB2 (ENSMZEG00005010560) col9a2 (ENSMZEG00005010617) #28 angpt2b (ENSMZEG00005010640) ENSMZEG00005010675 ENSMZEG00005010717 ENSMZEG00005010725 ENSMZEG00005010737 gjb9b (ENSMZEG00005010745) gjb9b (ENSMZEG00005010754) pef1 (ENSMZEG00005010760) Eastern happy MODERN SPECIES 13 hoxa5a (ENSACLG00000001190) HOXA7 (ENSACLG00000001195) ENSACLG00000001248 hoxa10b (ENSACLG00000001266) hoxa11a (ENSACLG00000001279) hoxa13a (ENSACLG00000001370) evx1 (ENSACLG00000001390) hibadha (ENSACLG00000001395) tax1bp1a (ENSACLG00000001428) jazf1a (ENSACLG00000001447) ENSACLG00000001476 TRIL (ENSACLG00000001487) osbpl3a (ENSACLG00000001532) ENSACLG00000001705 nup42 (ENSACLG00000001722) rims3 (ENSACLG00000001737) #22 ENSACLG00000002062 trappc3 (ENSACLG00000002073) col8a2 (ENSACLG00000002115) ptp4a2b (ENSACLG00000002127) ENSACLG00000002238 ENSACLG00000002250 ADGRB2 (ENSACLG00000002532) col9a2 (ENSACLG00000002709) #28 angpt2b (ENSACLG00000002895) ENSACLG00000002944 ENSACLG00000003206 ENSACLG00000003403 ENSACLG00000003410 gjb9b (ENSACLG00000003416) ENSACLG00000003426 P. nyererei MODERN SPECIES 325 hoxa5a (ENSPNYG00000020824) HOXA7 (ENSPNYG00000020831) ENSPNYG00000020845 hoxa10b (ENSPNYG00000020854) hoxa11a (ENSPNYG00000020865) hoxa13a (ENSPNYG00000020872) evx1 (ENSPNYG00000020879) hibadha (ENSPNYG00000020895) tax1bp1a (ENSPNYG00000020912) jazf1a (ENSPNYG00000020954) ENSPNYG00000020970 TRIL (ENSPNYG00000020984) osbpl3a (ENSPNYG00000021001) ENSPNYG00000021034 nup42 (ENSPNYG00000021054) rims3 (ENSPNYG00000021062) #22 smap2 (ENSPNYG00000021078) #27 trappc3 (ENSPNYG00000021098) col8a2 (ENSPNYG00000021113) ptp4a2b (ENSPNYG00000021125) ENSPNYG00000021144 ADGRB2 (ENSPNYG00000021156) ENSPNYG00000021219 col9a2 (ENSPNYG00000021246) #28 ENSPNYG00000021314 angpt2b (ENSPNYG00000021328) ENSPNYG00000021365 ENSPNYG00000021448 ENSPNYG00000021458 gjb9b (ENSPNYG00000021471) ENSPNYG00000021478 Lyretail cichlid MODERN SPECIES 302 HOXA7 (ENSNBRG00000004775) ENSNBRG00000004756 hoxa10b (ENSNBRG00000004742) hoxa11a (ENSNBRG00000004716) hoxa13a (ENSNBRG00000004706) evx1 (ENSNBRG00000004662) hibadha (ENSNBRG00000004647) tax1bp1a (ENSNBRG00000004586) jazf1a (ENSNBRG00000004573) jazf1a (ENSNBRG00000004558) ENSNBRG00000004534 ENSNBRG00000004507 osbpl3a (ENSNBRG00000004455) ENSNBRG00000004442 nup42 (ENSNBRG00000004424) rims3 (ENSNBRG00000004399) #22 smap2 (ENSNBRG00000004327) #27 trappc3 (ENSNBRG00000004294) ENSNBRG00000004287 ENSNBRG00000004272 col8a2 (ENSNBRG00000004249) ptp4a2b (ENSNBRG00000004228) ADGRB2 (ENSNBRG00000004160) Nile tilapia MODERN SPECIES 13 HOXA4 (ENSONIG00000004594) hoxa5a (ENSONIG00000004595) HOXA7 (ENSONIG00000004596) ENSONIG00000004597 hoxa10b (ENSONIG00000004598) hoxa11a (ENSONIG00000004600) hoxa13 (ENSONIG00000029807) evx1 (ENSONIG00000027928) hibadha (ENSONIG00000004603) tax1bp1a (ENSONIG00000004605) jazf1a (ENSONIG00000042804) ENSONIG00000034494 osbpl3a (ENSONIG00000004610) ENSONIG00000004618 nup42 (ENSONIG00000037233) rims3 (ENSONIG00000004620) #22 ENSONIG00000035265 ENSONIG00000042045 trappc3 (ENSONIG00000038477) col8a2 (ENSONIG00000038111) ptp4a2b (ENSONIG00000004632) ADGRB2 (ENSONIG00000004634) ENSONIG00000042754 col9a2 (ENSONIG00000004658) #28 angpt2b (ENSONIG00000004681) ENSONIG00000004689 ENSONIG00000036506 ENSONIG00000040367 gjb9b (ENSONIG00000004704) pef1 (ENSONIG00000034632) smim12 (ENSONIG00000041269) Midas cichlid MODERN SPECIES 563 HOXA4 (ENSACIG00000002307) hoxa5a (ENSACIG00000002319) HOXA7 (ENSACIG00000002354) ENSACIG00000002365 hoxa11a (ENSACIG00000002384) hoxa13a (ENSACIG00000002418) evx1 (ENSACIG00000002431) hibadha (ENSACIG00000002440) tax1bp1a (ENSACIG00000002452) jazf1a (ENSACIG00000002498) ENSACIG00000002517 TRIL (ENSACIG00000002530) osbpl3a (ENSACIG00000002569) ENSACIG00000002621 nup42 (ENSACIG00000002634) rims3 (ENSACIG00000002657) #22 smap2 (ENSACIG00000002678) #27 trappc3 (ENSACIG00000002716) col8a2 (ENSACIG00000002847) ENSACIG00000002860 ptp4a2b (ENSACIG00000002873) ADGRB2 (ENSACIG00000002909) col9a2 (ENSACIG00000003057) #28 angpt2b (ENSACIG00000003126) ENSACIG00000003164 ENSACIG00000003306 ENSACIG00000003332 gjb9b (ENSACIG00000003352) pef1 (ENSACIG00000003379) smim12 (ENSACIG00000003391) gja4 (ENSACIG00000003399) Tiger tail seahorse MODERN SPECIES 141 grhl2b (ENSHCOG00000003264) ncaldb (ENSHCOG00000003277) zgc:136493 (ENSHCOG00000003284) psmg2 (ENSHCOG00000000861) ptpn2b (ENSHCOG00000003308) eif3i (ENSHCOG00000003328) hdac1 (ENSHCOG00000003352) tmem79a (ENSHCOG00000003359) mef2d (ENSHCOG00000003436) ENSHCOG00000003465 BCAN (ENSHCOG00000003531) mrpl24 (ENSHCOG00000003539) HDGF (ENSHCOG00000003545) ENSHCOG00000003566 nup42 (ENSHCOG00000003600) rims3 (ENSHCOG00000003619) #22 smap2 (ENSHCOG00000003627) #27 trappc3 (ENSHCOG00000003656) col8a2 (ENSHCOG00000003676) ptp4a2b (ENSHCOG00000003690) Pinecone sodierfish MODERN SPECIES 2 hoxa5a (ENSMMDG00005023106) HOXA7 (ENSMMDG00005023109) ENSMMDG00005023112 ENSMMDG00005023114 hoxa11a (ENSMMDG00005023116) hoxa13a (ENSMMDG00005001155) evx1 (ENSMMDG00005001159) hibadha (ENSMMDG00005001180) tax1bp1a (ENSMMDG00005001294) jazf1a (ENSMMDG00005001312) ENSMMDG00005001324 TRIL (ENSMMDG00005001342) osbpl3a (ENSMMDG00005001447) ENSMMDG00005002423 nup42 (ENSMMDG00005002426) rims3 (ENSMMDG00005002432) #22 smap2 (ENSMMDG00005002437) #27 trappc3 (ENSMMDG00005002444) ENSMMDG00005002462 ptp4a2b (ENSMMDG00005002473) ADGRB2 (ENSMMDG00005002498) angpt2b (ENSMMDG00005002778) ENSMMDG00005003494 ENSMMDG00005003994 ENSMMDG00005003997 gjb9b (ENSMMDG00005004001) pef1 (ENSMMDG00005004013) smim12 (ENSMMDG00005004021) gja4 (ENSMMDG00005004022) dlgap3 (ENSMMDG00005004027) FUCA1 (ENSMMDG00005004029) Cod MODERN SPECIES 14 HOXA4 (ENSGMOG00000029383) hoxa5a (ENSGMOG00000013854) ENSGMOG00000036842 ENSGMOG00000024363 hoxa11a (ENSGMOG00000028868) ENSGMOG00000027233 evx1 (ENSGMOG00000013898) hibadha (ENSGMOG00000013912) tax1bp1a (ENSGMOG00000013935) jazf1a (ENSGMOG00000027822) CREB5 (ENSGMOG00000013999) TRIL (ENSGMOG00000026639) ENSGMOG00000014090 ENSGMOG00000035459 ENSGMOG00000026304 ENSGMOG00000014179 #22 ENSGMOG00000014200 trappc3 (ENSGMOG00000014231) ENSGMOG00000023880 ptp4a2b (ENSGMOG00000014324) ENSGMOG00000018487 ENSGMOG00000013290 col9a2 (ENSGMOG00000013372) #28 ENSGMOG00000023040 fndc5b (ENSGMOG00000034257) ldlrap1a (ENSGMOG00000012755) maco1a (ENSGMOG00000012742) ENSGMOG00000028660 ENSGMOG00000032200 e2f3 (ENSGMOG00000030682) sox4a (ENSGMOG00000030690) Protacanthopterygii ANCESTRAL SPECIES 112 ENSGT00940000159332 #22 ENSGT00940000158387 #27 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 ENSGT01060000251836 ENSGT00390000000118 ENSGT00390000018531 ENSGT00940000158906.j ENSGT00940000154896.l ENSGT00940000154896.k.a ENSGT00940000154807.a.b.b ENSGT00510000049601 ENSGT00940000158569 ENSGT00940000166437 ENSGT00940000154994.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 280 ENSGT00940000159332.g #22 ENSGT00940000158387.i #27 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 ENSGT00390000000118.d ENSGT00390000018531 ENSGT00940000158906.j.r ENSGT00940000158906.j.q ENSGT00940000154896.l.z ENSGT00510000049601.i ENSGT00940000166437.e ENSGT00940000154994.b ENSGT00440000035378.c.a ENSGT00940000159513.j ENSGT01090000260070.B.j Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00940000158303.d ENSGT01050000244950.a.b.y ENSGT00940000155718.b.f ENSGT00940000154641.B.a ENSGT00940000154928.c.b.d ENSGT01030000234513.A.a.a.a.b.c.a ENSGT01030000234513.A.a.a.a.a.f.b ENSGT00390000004700.a.h.c ENSGT00940000165764.c.a ENSGT00390000015159.a.a.e.b ENSGT00390000015214.db.a #37 ENSGT00940000158613.k.f #35 ENSGT00390000005318.b.b.b.b.e #34 ENSGT00950000182963.a.b.f.a ENSGT00390000018108.b.d ENSGT00940000159332.g #22 ENSGT00940000158387.i #27 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 ENSGT00390000000118.d ENSGT00390000018531 ENSGT00940000158906.j.r ENSGT00940000158906.j.q ENSGT00940000154896.l.z ENSGT00940000154807.b ENSGT00510000049601.i ENSGT00940000166437.e ENSGT00940000154994.b ENSGT00440000035378.c.a ENSGT00940000159513.j Oncorhynchus ANCESTRAL SPECIES 87 ENSGT00390000005318.b.b.b.b.e #34 ENSGT00950000182963.a.b.f.a ENSGT00390000018108.b.d ENSGT00940000159332.g #22 ENSGT00940000158387.i #27 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 ENSGT00390000000118.d ENSGT00390000018531 ENSGT00940000158906.j.r ENSGT00940000158906.j.q ENSGT00940000154896.l.z ENSGT00510000049601.i ENSGT00940000166437.e ENSGT00940000154994.b ENSGT00440000035378.c.a ENSGT00940000159513.j ENSGT01090000260070.B.j.a Rainbow trout MODERN SPECIES 24 ENSOMYG00000049486 zgc:91944 (ENSOMYG00000003649) ENSOMYG00000003612 ENSOMYG00000003577 ENSOMYG00000003508 hpca (ENSOMYG00000071504) hpcal4 (ENSOMYG00000069956) ENSOMYG00000070516 ENSOMYG00000003406 #37 ENSOMYG00000052170 #35 ENSOMYG00000065984 ENSOMYG00000067293 mfsd2ab (ENSOMYG00000034226) #34 si:ch211-194e15.5 (ENSOMYG00000053198) ENSOMYG00000070521 ENSOMYG00000050898 #22 ENSOMYG00000054361 #27 ENSOMYG00000059506 ENSOMYG00000071549 ENSOMYG00000063814 nup42 (ENSOMYG00000058901) ENSOMYG00000034782 slc6a18 (ENSOMYG00000034578) slc6a18 (ENSOMYG00000034723) ENSOMYG00000034439 gstr (ENSOMYG00000034408) heyl (ENSOMYG00000059343) ENSOMYG00000075100 fuca1.2 (ENSOMYG00000034376) dlgap3 (ENSOMYG00000069851) ENSOMYG00000048414 Oncorhynchus_a ANCESTRAL SPECIES 100 ENSGT00940000159332.g #22 ENSGT00940000158387.i #27 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 ENSGT00390000000118.d ENSGT00390000018531 ENSGT00940000158906.j.r ENSGT00940000154896.l.z ENSGT00510000049601.i ENSGT00940000166437.e ENSGT00940000154994.b ENSGT00440000035378.c.a ENSGT00940000159513.j ENSGT01090000260070.B.j.a ENSGT00390000009435 Coho salmon MODERN SPECIES 5 ENSOKIG00005036495 ENSOKIG00005036506 ENSOKIG00005036520 ENSOKIG00005036529 ENSOKIG00005036534 hpca (ENSOKIG00005036540) ENSOKIG00005036552 ENSOKIG00005036577 fam49al (ENSOKIG00005036632) ENSOKIG00005004249 MYCL (ENSOKIG00005004265) #35 ENSOKIG00005004286 ENSOKIG00005004300 ENSOKIG00005004321 mfsd2ab (ENSOKIG00005004459) #34 ENSOKIG00005004899 #22 smap2 (ENSOKIG00005004924) #27 ENSOKIG00005004935 FKBP14 (ENSOKIG00005004945) ENSOKIG00005004955 nup42 (ENSOKIG00005004962) ENSOKIG00005004973 tert (ENSOKIG00005005032) slc6a18 (ENSOKIG00005005257) ENSOKIG00005005550 ENSOKIG00005005724 heyl (ENSOKIG00005005731) zbtb8b (ENSOKIG00005005738) fuca1.2 (ENSOKIG00005005749) dlgap3 (ENSOKIG00005005763) ENSOKIG00005005798 Chinook salmon MODERN SPECIES 24 ncalda (ENSOTSG00005021813) RIDA (ENSOTSG00005021814) rpl30 (ENSOTSG00005021891) rrm2b (ENSOTSG00005021892) ENSOTSG00005021893 azin1b (ENSOTSG00005021894) angpt2b (ENSOTSG00005021895) ENSOTSG00005021897 zgc:111986 (ENSOTSG00005021898) tdp2b (ENSOTSG00005021899) tmem64 (ENSOTSG00005021901) ENSOTSG00005021903 ENSOTSG00005021904 ENSOTSG00005021906 eif3ha (ENSOTSG00005021907) rims3 (ENSOTSG00005021908) #22 nup42 (ENSOTSG00005021909) fam49al (ENSOTSG00005021910) hpcal4 (ENSOTSG00005021911) hpca (ENSOTSG00005021912) ENSOTSG00005021913 ENSOTSG00005021915 zgc:91944 (ENSOTSG00005021916) ENSOTSG00005021918 ENSOTSG00005021919 khdrbs1b (ENSOTSG00005021920) ldlrap1a (ENSOTSG00005021923) fndc5b (ENSOTSG00005021926) ENSOTSG00005021927 ENSOTSG00005021928 ENSOTSG00005021929 Salmo ANCESTRAL SPECIES 2 ENSGT00940000158303.d ENSGT01050000244950.a.b.y ENSGT00940000155718.b.f ENSGT00940000154641.B.a ENSGT00940000154928.c.b.d ENSGT01030000234513.A.a.a.a.b.c.a ENSGT01030000234513.A.a.a.a.a.f.b ENSGT00390000004700.a.h.c ENSGT00940000165764.c.a ENSGT00390000015159.a.a.e.b ENSGT00390000015214.db.a #37 ENSGT00940000158613.k.f #35 ENSGT00390000005318.b.b.b.b.e #34 ENSGT00950000182963.a.b.f.a ENSGT00940000154748.B ENSGT00940000159332.g #22 ENSGT00940000158387.i #27 ENSGT00940000157248.c.b ENSGT00940000157858.j ENSGT00940000160267 ENSGT00390000000118.d ENSGT00390000018531 ENSGT00940000158906.j.r ENSGT00940000154896.l.z ENSGT00940000154807.a.b.b ENSGT00940000154807.b ENSGT00510000049601.i ENSGT00940000166437.e ENSGT00940000154994.b.c ENSGT00440000035378.c.a ENSGT00940000159513.j Atlantic salmon MODERN SPECIES 5 ENSSSAG00000087382 ENSSSAG00000092233 hpca (ENSSSAG00000102946) ENSSSAG00000089776 hpcal4 (ENSSSAG00000093637) fam49al (ENSSSAG00000065107) ENSSSAG00000056147 #37 myclb (ENSSSAG00000101843) #35 ENSSSAG00000056144 mfsd2ab (ENSSSAG00000065662) #34 si:ch211-194e15.5 (ENSSSAG00000055312) ENSSSAG00000111522 ENSSSAG00000118322 ENSSSAG00000055154 ENSSSAG00000098493 ENSSSAG00000106884 #22 ENSSSAG00000095627 #27 ENSSSAG00000055077 ENSSSAG00000055070 ENSSSAG00000116789 nup42 (ENSSSAG00000055015) tert (ENSSSAG00000051784) ENSSSAG00000120487 slc6a18 (ENSSSAG00000050802) ENSSSAG00000082207 slc6a19 (ENSSSAG00000050191) ENSSSAG00000119433 ENSSSAG00000094191 gstr (ENSSSAG00000056150) heyl (ENSSSAG00000120925) ENSSSAG00000119564 River trout DUPLICATION River trout MODERN SPECIES 254 rims3 (ENSSTUG00000040867) #22 ENSSTUG00000040905 slc6a19a.1 (ENSSTUG00000040944) nup42 (ENSSTUG00000041207) River trout MODERN SPECIES 29 KPNA6 (ENSSTUG00000040695) khdrbs1b (ENSSTUG00000040662) ENSSTUG00000040638 zgc:91944 (ENSSTUG00000040567) ENSSTUG00000040485 ENSSTUG00000040476 ENSSTUG00000040438 ENSSTUG00000040428 hpca (ENSSTUG00000040406) hpcal4 (ENSSTUG00000040396) ENSSTUG00000040393 #37 myclb (ENSSTUG00000040390) #35 mfsd2ab (ENSSTUG00000039301) #34 si:ch211-194e15.5 (ENSSTUG00000039260) ENSSTUG00000038801 rims3 (ENSSTUG00000038773) #22 smap2 (ENSSTUG00000038771) #27 ENSSTUG00000038748 FKBP14 (ENSSTUG00000038740) ENSSTUG00000038718 nup42 (ENSSTUG00000038704) tert (ENSSTUG00000038585) slc6a18 (ENSSTUG00000038178) ENSSTUG00000037991 ENSSTUG00000037974 gstr (ENSSTUG00000037965) ENSSTUG00000037962 gja4 (ENSSTUG00000037956) smim12 (ENSSTUG00000037948) pef1 (ENSSTUG00000037920) ENSSTUG00000037913 Salmoninae ANCESTRAL SPECIES 1594 ENSGT00940000159332.h #22 ENSGT00940000158387.j #27 Huchen MODERN SPECIES 7091 ENSHHUG00000011805 #22 Salmoninae_a ANCESTRAL SPECIES 28 ENSGT00940000154928.c.b.c ENSGT01030000234513.A.a.a.a.a.f.a ENSGT00390000004700.a.h.d ENSGT00940000158110.h ENSGT00390000017767.b.b.a ENSGT00940000165764.c.b ENSGT00940000165764.d ENSGT00390000015159.a.a.f ENSGT00390000015214.db.b #37 ENSGT00940000158613.k.e #35 ENSGT00390000005318.b.b.b.b.f #34 ENSGT00940000156949 ENSGT00940000171296.b ENSGT00950000182963.a.b.f.b ENSGT00390000018108.b.c ENSGT00940000159332.h #22 ENSGT00940000158387.j #27 ENSGT00390000000118.c ENSGT00940000154896.k.a ENSGT00940000154807.a.b.b ENSGT00940000166437.f ENSGT00440000035378.c.b ENSGT00940000153269.b.b.n ENSGT01030000234510.a.a.a.a.a.a ENSGT00940000156554.b.d ENSGT00390000000724.c.b.d ENSGT00390000003465.b.b.a ENSGT00940000154697.a.a.a.b ENSGT00940000154984.A.g ENSGT00390000012138.a.b.c.a.b ENSGT00940000154181.b.b Oncorhynchus ANCESTRAL SPECIES 29 ENSGT00940000155718.b.e ENSGT00940000154928.c.b.c ENSGT01030000234513.A.a.a.a.a.f.a ENSGT00390000004700.a.h.c ENSGT00940000158110.h ENSGT00390000017767.b.b.a ENSGT00940000165764.d.b ENSGT00390000015159.a.a.f ENSGT00390000015214.db.b #37 ENSGT00940000158613.k.e #35 ENSGT00390000005318.b.b.b.b.f #34 ENSGT00940000156949 ENSGT00940000171296.b ENSGT00950000182963.a.b.f.b ENSGT00390000018108.b.c ENSGT00940000159332.h #22 ENSGT00940000158387.j #27 ENSGT00390000000118.c ENSGT00940000154896.k.a ENSGT00940000154807.a.b.b ENSGT00940000166437.f ENSGT00440000035378.c.b ENSGT00940000159513.i ENSGT01090000260070.B.j.b ENSGT00940000153269.b.b.n ENSGT01030000234510.a.a.a.a.a.a ENSGT00940000156554.b.d ENSGT00390000000724.c.b.d ENSGT00390000003465.b.b.a ENSGT00940000154697.a.a.a.b ENSGT00390000008918 Oncorhynchus_a ANCESTRAL SPECIES 117 ENSGT00940000161371 ENSGT00940000158303.c ENSGT01050000244950.a.b.z ENSGT00940000155718.b.e ENSGT00940000154928.c.b.c ENSGT01030000234513.A.a.a.a.a.f.a ENSGT00940000158110.h ENSGT00390000017767.b.b.a ENSGT00940000165764.d.b ENSGT00390000015159.a.a.f ENSGT00390000015214.db.b #37 ENSGT00940000158613.k.e #35 ENSGT00390000005318.b.b.b.b.f #34 ENSGT00950000182963.a.b.f.b ENSGT00390000018108.b.c ENSGT00940000159332.h #22 ENSGT00940000158387.j #27 ENSGT00390000000118.c ENSGT00940000154896.k.a ENSGT00940000154807.a.b.b ENSGT00940000166437.f ENSGT00440000035378.c.b ENSGT00940000159513.i Coho salmon MODERN SPECIES 8 ENSOKIG00005026025 zgc:91944 (ENSOKIG00005025985) GJB3 (ENSOKIG00005025966) ENSOKIG00005025960 ENSOKIG00005025945 nt5c1aa (ENSOKIG00005025914) ENSOKIG00005025893 hpcal4 (ENSOKIG00005025879) ENSOKIG00005025855 fam49al (ENSOKIG00005025526) trit1 (ENSOKIG00005025476) #37 myclb (ENSOKIG00005025468) #35 mfsd2ab (ENSOKIG00005025002) #34 si:ch211-194e15.5 (ENSOKIG00005024948) ENSOKIG00005024935 rims3 (ENSOKIG00005024919) #22 ENSOKIG00005024914 #27 nup42 (ENSOKIG00005024881) ENSOKIG00005023728 ENSOKIG00005023677 ENSOKIG00005023672 ENSOKIG00005023666 ENSOKIG00005023635 heyl (ENSOKIG00005023605) FUCA1 (ENSOKIG00005023563) ENSOKIG00005023555 ENSOKIG00005023549 gja4 (ENSOKIG00005023533) gjb9b (ENSOKIG00005023512) ENSOKIG00005023495 ENSOKIG00005023487 Rainbow trout MODERN SPECIES 9 NECAB1 (ENSOMYG00000076168) tmem64 (ENSOMYG00000030894) ENSOMYG00000007370 ENSOMYG00000034129 ENSOMYG00000069461 angpt2b (ENSOMYG00000069799) ENSOMYG00000067116 ENSOMYG00000058116 ENSOMYG00000070958 ENSOMYG00000070759 ENSOMYG00000059535 gjb9b (ENSOMYG00000064515) ENSOMYG00000005789 ENSOMYG00000005719 ENSOMYG00000005827 ENSOMYG00000005907 #22 ENSOMYG00000071811 ENSOMYG00000006510 ENSOMYG00000006319 ENSOMYG00000076470 ENSOMYG00000065442 ENSOMYG00000055486 ENSOMYG00000005943 ENSOMYG00000062788 ENSOMYG00000071870 ENSOMYG00000048460 ENSOMYG00000006566 ENSOMYG00000066904 ENSOMYG00000006614 ENSOMYG00000052626 ENSOMYG00000057755 Salmo ANCESTRAL SPECIES 2 ENSGT01050000244950.a.b.z ENSGT00940000155718.b.e ENSGT00940000154928.c.b.c ENSGT01030000234513.A.a.a.a.a.f.a ENSGT00390000004700.a.h.d ENSGT00940000158110.h ENSGT00390000017767.b.b.a ENSGT00940000165764.c.b ENSGT00390000015159.a.a.f ENSGT00390000015214.db.b #37 ENSGT00940000158613.k.e #35 ENSGT00390000005318.b.b.b.b.f #34 ENSGT00940000156949 ENSGT00940000171296.b ENSGT00390000018108.b.c ENSGT00940000159332.h #22 ENSGT00940000158387.j #27 ENSGT00390000000118.c ENSGT00940000154896.k.a ENSGT00940000166437.f ENSGT00940000154994.b.d ENSGT00440000035378.c.b ENSGT00940000159513.i ENSGT00940000153269.b.b.n ENSGT01030000234510.a.a.a.a.a.a ENSGT00940000156554.b.d ENSGT00390000000724.c.b.d ENSGT00390000003465.b.b.a ENSGT00940000154697.a.a.a.b ENSGT00390000008918 ENSGT00940000154984.A.h.a Atlantic salmon MODERN SPECIES 19 ENSSSAG00000102498 ENSSSAG00000099550 tmem54b (ENSSSAG00000050051) hpca (ENSSSAG00000116685) nt5c1aa (ENSSSAG00000121644) hpcal4 (ENSSSAG00000050119) fam49al (ENSSSAG00000107810) ENSSSAG00000090397 TRIT1 (ENSSSAG00000104484) #37 myclb (ENSSSAG00000086424) #35 mfsd2ab (ENSSSAG00000055338) #34 yars (ENSSSAG00000065633) ENSSSAG00000065606 ENSSSAG00000089727 ENSSSAG00000065591 ENSSSAG00000055132 #22 ENSSSAG00000102987 #27 ENSSSAG00000065925 nupl2 (ENSSSAG00000065923) ENSSSAG00000104853 ENSSSAG00000086811 ENSSSAG00000095231 ENSSSAG00000116306 ENSSSAG00000065935 ENSSSAG00000065950 ENSSSAG00000104699 ENSSSAG00000110183 ENSSSAG00000065962 mc5ra (ENSSSAG00000100030) ENSSSAG00000065969 LDLRAD4 (ENSSSAG00000102457) Northern pike MODERN SPECIES 9 ENSELUG00000017470 eya3 (ENSELUG00000017448) si:ch211-195b13.1 (ENSELUG00000017374) ENSELUG00000029661 myo1g (ENSELUG00000017330) si:dkeyp-92c9.2 (ENSELUG00000017305) ENSELUG00000028500 ENSELUG00000017291 trit1 (ENSELUG00000017278) #37 myclb (ENSELUG00000017228) #35 mfsd2ab (ENSELUG00000017220) #34 yars1 (ENSELUG00000017171) ENSELUG00000017134 ENSELUG00000000640 rbbp4 (ENSELUG00000017073) rims3 (ENSELUG00000017025) #22 smap2 (ENSELUG00000017011) #27 ENSELUG00000032187 ENSELUG00000016982 FKBP14 (ENSELUG00000016947) klhl38a (ENSELUG00000016921) fam91a1 (ENSELUG00000016894) lratd2a (ENSELUG00000016790) TRIB1 (ENSELUG00000016780) cibar1 (ENSELUG00000016762) triqk (ENSELUG00000016719) runx1t1 (ENSELUG00000016688) ENSELUG00000034648 ENSELUG00000016652 pip4p2 (ENSELUG00000016538) necab1 (ENSELUG00000016505) Spotted gar MODERN SPECIES 672 ENSLOCG00000000972 eloa (ENSLOCG00000000997) pithd1 (ENSLOCG00000001023) lypla2 (ENSLOCG00000001047) sfpq (ENSLOCG00000001067) rnf19b (ENSLOCG00000001101) ak2 (ENSLOCG00000001124) ENSLOCG00000001148 ndufs5 (ENSLOCG00000001164) MACF1 (ENSLOCG00000001182) bmp8a (ENSLOCG00000001276) HCRTR1 (ENSLOCG00000001293) TINAGL1 (ENSLOCG00000001320) KCNQ4 (ENSLOCG00000001349) #20 nfyc (ENSLOCG00000001376) #21 rims3 (ENSLOCG00000001399) #22 smap2 (ENSLOCG00000001419) #27 col9a2 (ENSLOCG00000001441) #28 COL16A1 (ENSLOCG00000001473) ADGRB2 (ENSLOCG00000001563) ptp4a2b (ENSLOCG00000001611) col8a2 (ENSLOCG00000001624) trappc3 (ENSLOCG00000001636) angpt2b (ENSLOCG00000001647) ENSLOCG00000001676 gjb9a (ENSLOCG00000018271) pef1 (ENSLOCG00000001726) smim12 (ENSLOCG00000018272) gja4 (ENSLOCG00000001736) dlgap3 (ENSLOCG00000001754) ENSLOCG00000001767 Reedfish MODERN SPECIES 5 ENSECRG00000012365 nt5c1aa (ENSECRG00000012415) hpcal4 (ENSECRG00000012436) fam49al (ENSECRG00000012457) trit1 (ENSECRG00000012485) #37 ENSECRG00000012497 myclb (ENSECRG00000012519) #35 mfsd2aa (ENSECRG00000012556) #34 TINAGL1 (ENSECRG00000012583) HCRTR1 (ENSECRG00000012633) zgc:91910 (ENSECRG00000012709) gjb10 (ENSECRG00000012721) gjb3 (ENSECRG00000012731) KCNQ4 (ENSECRG00000012750) #20 nfyc (ENSECRG00000012781) #21 rims3 (ENSECRG00000012798) #22 smap2 (ENSECRG00000012810) #27 ENSECRG00000012823 ENSECRG00000012838 ENSECRG00000012852 ADGRB2 (ENSECRG00000012878) ENSECRG00000012912 ptp4a2b (ENSECRG00000012918) col8a2 (ENSECRG00000012930) ENSECRG00000012942 trappc3 (ENSECRG00000012955) angpt2b (ENSECRG00000013006) ENSECRG00000013110 ENSECRG00000013116 ENSECRG00000013165 ENSECRG00000013252 Elephant shark MODERN SPECIES 1521 ENSCMIG00000019191 KCNQ4 (ENSCMIG00000019189) #20 nfyc (ENSCMIG00000019187) #21 rims3 (ENSCMIG00000019183) #22 smap2 (ENSCMIG00000019179) #27 col9a2 (ENSCMIG00000019177) #28 ENSCMIG00000019174 ENSCMIG00000019171 ENSCMIG00000019166 ENSCMIG00000019158 ENSCMIG00000019133 ENSCMIG00000019131 nipal3 (ENSCMIG00000019129) ENSCMIG00000019126 INPP5B (ENSCMIG00000019117) mtf1 (ENSCMIG00000019108) yrdc (ENSCMIG00000019103) ENSCMIG00000019100 ENSCMIG00000019098