Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000014507.b	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36
Glires	ANCESTRAL SPECIES		ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256312	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36
Rodentia	ANCESTRAL SPECIES		ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256312	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000014507.b	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Myomorpha	ANCESTRAL SPECIES	16	ENSGT00390000014507.b	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Muroidea	ANCESTRAL SPECIES	9	ENSGT00390000014507.b	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT00390000014507.b	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Murinae	ANCESTRAL SPECIES	11	ENSGT00390000014507.b	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Mus	ANCESTRAL SPECIES	5	ENSGT00390000014507.b.a.a	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Shrew mouse	MODERN SPECIES	18	MGP_PahariEiJ_G0027833 #7	Plekha6 (MGP_PahariEiJ_G0027832) #8	Ppp1r15b (MGP_PahariEiJ_G0027831) #9	Pik3c2b (MGP_PahariEiJ_G0027830) #10	Mdm4 (MGP_PahariEiJ_G0027829) #11	Lrrn2 (MGP_PahariEiJ_G0027828) #12	Nfasc (MGP_PahariEiJ_G0027827) #13	Cntn2 (MGP_PahariEiJ_G0027826) #14	Tmem81 (MGP_PahariEiJ_G0027825) #15	Rbbp5 (MGP_PahariEiJ_G0027824) #16	Dstyk (MGP_PahariEiJ_G0027823) #17	Tmcc2 (MGP_PahariEiJ_G0027822) #18	Nuak2 (MGP_PahariEiJ_G0027821) #19	Klhdc8a (MGP_PahariEiJ_G0027820) #20	Lemd1 (MGP_PahariEiJ_G0027819) #21	Cdk18 (MGP_PahariEiJ_G0027818) #22	Mfsd4a (MGP_PahariEiJ_G0027817) #23	Elk4 (MGP_PahariEiJ_G0027816) #24	Slc45a3 (MGP_PahariEiJ_G0027815) #25	Nucks1 (MGP_PahariEiJ_G0027814) #26	Rab29 (MGP_PahariEiJ_G0027813) #27	Slc41a1 (MGP_PahariEiJ_G0027812) #28	MGP_PahariEiJ_G0027811 #29	Slc26a9 (MGP_PahariEiJ_G0027810) #30	Rab7b (MGP_PahariEiJ_G0027809) #31	Ctse (MGP_PahariEiJ_G0027808) #32	Avpr1b (MGP_PahariEiJ_G0027807) #33	Fam72a (MGP_PahariEiJ_G0027806) #34	MGP_PahariEiJ_G0027805 #35	Ikbke (MGP_PahariEiJ_G0027804) #36	Rassf5 (MGP_PahariEiJ_G0027803) #37
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00860000136208	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a.qb #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00860000136208	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a.qb #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00860000136208	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Steppe mouse	MODERN SPECIES	226	Plekha6 (ENSMSIG00000022432) #8	Ppp1r15b (ENSMSIG00000022727) #9	Pik3c2b (ENSMSIG00000022736) #10	Mdm4 (ENSMSIG00000022799) #11	Lrrn2 (ENSMSIG00000022899) #12	Nfasc (ENSMSIG00000022913) #13	Cntn2 (ENSMSIG00000023282) #14	Tmem81 (ENSMSIG00000023304) #15	ENSMSIG00000023311	Rbbp5 (ENSMSIG00000023316) #16	Dstyk (ENSMSIG00000023415) #17	Tmcc2 (ENSMSIG00000023478) #18	Nuak2 (ENSMSIG00000023512) #19	Klhdc8a (ENSMSIG00000023550) #20	Lemd1 (ENSMSIG00000023579) #21	Cdk18 (ENSMSIG00000023626) #22	Mfsd4a (ENSMSIG00000023701) #23	Elk4 (ENSMSIG00000024131) #24	Slc45a3 (ENSMSIG00000024139) #25	Nucks1 (ENSMSIG00000024170) #26	Rab29 (ENSMSIG00000024195) #27	Slc41a1 (ENSMSIG00000024239) #28	Pm20d1 (ENSMSIG00000024275) #29	Slc26a9 (ENSMSIG00000024339) #30	Rab7b (ENSMSIG00000024381) #31	Ctse (ENSMSIG00000024459) #32	ENSMSIG00000024497	Avpr1b (ENSMSIG00000024504) #33	Fam72a (ENSMSIG00000024508) #34	Srgap2 (ENSMSIG00000024516) #35	Ikbke (ENSMSIG00000024599) #36
spretus	MODERN SPECIES		Plekha6 (MGP_SPRETEiJ_G0015403) #8	Ppp1r15b (MGP_SPRETEiJ_G0015402) #9	Pik3c2b (MGP_SPRETEiJ_G0015401) #10	Mdm4 (MGP_SPRETEiJ_G0015400) #11	Lrrn2 (MGP_SPRETEiJ_G0015399) #12	Nfasc (MGP_SPRETEiJ_G0015398) #13	Cntn2 (MGP_SPRETEiJ_G0015397) #14	Tmem81 (MGP_SPRETEiJ_G0015396) #15	Rbbp5 (MGP_SPRETEiJ_G0015395) #16	Dstyk (MGP_SPRETEiJ_G0015394) #17	Tmcc2 (MGP_SPRETEiJ_G0015393) #18	Nuak2 (MGP_SPRETEiJ_G0015392) #19	Klhdc8a (MGP_SPRETEiJ_G0015391) #20	MGP_SPRETEiJ_G0015390	Lemd1 (MGP_SPRETEiJ_G0015389) #21	Cdk18 (MGP_SPRETEiJ_G0015388) #22	Mfsd4a (MGP_SPRETEiJ_G0015387) #23	Elk4 (MGP_SPRETEiJ_G0015386) #24	Slc45a3 (MGP_SPRETEiJ_G0015385) #25	Nucks1 (MGP_SPRETEiJ_G0015384) #26	Rab29 (MGP_SPRETEiJ_G0015383) #27	Slc41a1 (MGP_SPRETEiJ_G0015382) #28	Pm20d1 (MGP_SPRETEiJ_G0015381) #29	Slc26a9 (MGP_SPRETEiJ_G0015380) #30	Rab7b (MGP_SPRETEiJ_G0015379) #31	Ctse (MGP_SPRETEiJ_G0015378) #32	Avpr1b (MGP_SPRETEiJ_G0015377) #33	Fam72a (MGP_SPRETEiJ_G0015376) #34	MGP_SPRETEiJ_G0015375 #35	Ikbke (MGP_SPRETEiJ_G0015374) #36	Rassf5 (MGP_SPRETEiJ_G0015373) #37
Mouse	MODERN SPECIES		Plekha6 (ENSMUSG00000041757) #8	Ppp1r15b (ENSMUSG00000046062) #9	Pik3c2b (ENSMUSG00000026447) #10	Mdm4 (ENSMUSG00000054387) #11	Lrrn2 (ENSMUSG00000026443) #12	Nfasc (ENSMUSG00000026442) #13	Cntn2 (ENSMUSG00000053024) #14	Tmem81 (ENSMUSG00000048174) #15	Rbbp5 (ENSMUSG00000026439) #16	Dstyk (ENSMUSG00000042046) #17	Tmcc2 (ENSMUSG00000042066) #18	Nuak2 (ENSMUSG00000009772) #19	Klhdc8a (ENSMUSG00000042115) #20	Gm29695 (ENSMUSG00000118219)	Lemd1 (ENSMUSG00000079330) #21	Cdk18 (ENSMUSG00000026437) #22	Mfsd4a (ENSMUSG00000059149) #23	Elk4 (ENSMUSG00000026436) #24	Slc45a3 (ENSMUSG00000026435) #25	Nucks1 (ENSMUSG00000026434) #26	Rab29 (ENSMUSG00000026433) #27	Slc41a1 (ENSMUSG00000013275) #28	Pm20d1 (ENSMUSG00000042251) #29	Slc26a9 (ENSMUSG00000042268) #30	Rab7b (ENSMUSG00000052688) #31	Ctse (ENSMUSG00000004552) #32	Avpr1b (ENSMUSG00000026432) #33	Fam72a (ENSMUSG00000055184) #34	Srgap2 (ENSMUSG00000026425) #35	Ikbke (ENSMUSG00000042349) #36	Rassf5 (ENSMUSG00000026430) #37
Ryukyu mouse	MODERN SPECIES		Plekha6 (MGP_CAROLIEiJ_G0014596) #8	Ppp1r15b (MGP_CAROLIEiJ_G0014595) #9	Pik3c2b (MGP_CAROLIEiJ_G0014594) #10	Mdm4 (MGP_CAROLIEiJ_G0014593) #11	Lrrn2 (MGP_CAROLIEiJ_G0014592) #12	Nfasc (MGP_CAROLIEiJ_G0014591) #13	Cntn2 (MGP_CAROLIEiJ_G0014590) #14	Tmem81 (MGP_CAROLIEiJ_G0014589) #15	Rbbp5 (MGP_CAROLIEiJ_G0014588) #16	Dstyk (MGP_CAROLIEiJ_G0014587) #17	Tmcc2 (MGP_CAROLIEiJ_G0014586) #18	Nuak2 (MGP_CAROLIEiJ_G0014585) #19	Klhdc8a (MGP_CAROLIEiJ_G0014584) #20	MGP_CAROLIEiJ_G0014583	Lemd1 (MGP_CAROLIEiJ_G0014582) #21	Cdk18 (MGP_CAROLIEiJ_G0014581) #22	Mfsd4a (MGP_CAROLIEiJ_G0014580) #23	Elk4 (MGP_CAROLIEiJ_G0014579) #24	Slc45a3 (MGP_CAROLIEiJ_G0014578) #25	Nucks1 (MGP_CAROLIEiJ_G0014577) #26	Slc26a9 (MGP_CAROLIEiJ_G0014576) #30	Rab7b (MGP_CAROLIEiJ_G0014575) #31	Ctse (MGP_CAROLIEiJ_G0014574) #32	Avpr1b (MGP_CAROLIEiJ_G0014573) #33	Fam72a (MGP_CAROLIEiJ_G0014572) #34	MGP_CAROLIEiJ_G0014571 #35	Ikbke (MGP_CAROLIEiJ_G0014570) #36	Rassf5 (MGP_CAROLIEiJ_G0014569) #37	Eif2d (MGP_CAROLIEiJ_G0014568)	MGP_CAROLIEiJ_G0014567	Mapkapk2 (MGP_CAROLIEiJ_G0014566)
Rat	MODERN SPECIES	4	Golt1a (ENSRNOG00000002936)	Plekha6 (ENSRNOG00000002907) #8	Ppp1r15b (ENSRNOG00000028493) #9	Pik3c2b (ENSRNOG00000029938) #10	Mdm4 (ENSRNOG00000009696) #11	Lrrn2 (ENSRNOG00000009691) #12	Nfasc (ENSRNOG00000030515) #13	Cntn2 (ENSRNOG00000009033) #14	Tmem81 (ENSRNOG00000028752) #15	Rbbp5 (ENSRNOG00000021289) #16	Dstyk (ENSRNOG00000021298) #17	Tmcc2 (ENSRNOG00000000033) #18	Nuak2 (ENSRNOG00000000034) #19	Klhdc8a (ENSRNOG00000000036) #20	Lemd1 (ENSRNOG00000051244) #21	Cdk18 (ENSRNOG00000008137) #22	Mfsd4a (ENSRNOG00000024657) #23	Elk4 (ENSRNOG00000007887) #24	Slc45a3 (ENSRNOG00000007591) #25	ENSRNOG00000070926	Nucks1 (ENSRNOG00000047287) #26	Rab29 (ENSRNOG00000049641) #27	Slc41a1 (ENSRNOG00000042320) #28	Pm20d1 (ENSRNOG00000039745) #29	Slc26a9 (ENSRNOG00000029514) #30	Rab7b (ENSRNOG00000039754) #31	Ctse (ENSRNOG00000006963) #32	Avpr1b (ENSRNOG00000048522) #33	Fam72a (ENSRNOG00000042747) #34	Srgap2 (ENSRNOG00000006733) #35	Ikbke (ENSRNOG00000025100) #36
Cricetidae	ANCESTRAL SPECIES	13	ENSGT00390000014507.b	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00390000014507.b	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Chinese hamster chok1gshd	MODERN SPECIES	2	Golt1a (ENSCGRG00001012446)	Plekha6 (ENSCGRG00001023579) #8	Ppp1r15b (ENSCGRG00001007710) #9	Pik3c2b (ENSCGRG00001024716) #10	Mdm4 (ENSCGRG00001004339) #11	Lrrn2 (ENSCGRG00001010870) #12	Nfasc (ENSCGRG00001010423) #13	Cntn2 (ENSCGRG00001000875) #14	Tmem81 (ENSCGRG00001003877) #15	Rbbp5 (ENSCGRG00001015995) #16	Dstyk (ENSCGRG00001013846) #17	Tmcc2 (ENSCGRG00001018382) #18	Nuak2 (ENSCGRG00001024690) #19	Klhdc8a (ENSCGRG00001011449) #20	Lemd1 (ENSCGRG00001013207) #21	Cdk18 (ENSCGRG00001024457) #22	Mfsd4a (ENSCGRG00001019519) #23	Elk4 (ENSCGRG00001008899) #24	Slc45a3 (ENSCGRG00001012433) #25	ENSCGRG00001014111 #26	Rab29 (ENSCGRG00001017622) #27	Slc41a1 (ENSCGRG00001019040) #28	Pm20d1 (ENSCGRG00001004594) #29	Slc26a9 (ENSCGRG00001015835) #30	Rab7b (ENSCGRG00001021618) #31	Ctse (ENSCGRG00001004682) #32	Avpr1b (ENSCGRG00001020692) #33	Fam72a (ENSCGRG00001021328) #34	Srgap2 (ENSCGRG00001005806) #35	Ikbke (ENSCGRG00001016980) #36	Rassf5 (ENSCGRG00001019409) #37
Golden Hamster	MODERN SPECIES	880								ENSMAUG00000008201 #13	Cntn2 (ENSMAUG00000015129) #14	Rbbp5 (ENSMAUG00000015932) #16	Dstyk (ENSMAUG00000011558) #17	Tmcc2 (ENSMAUG00000013380) #18	Nuak2 (ENSMAUG00000017535) #19	Klhdc8a (ENSMAUG00000007871) #20	Lemd1 (ENSMAUG00000020450) #21	Cdk18 (ENSMAUG00000013251) #22	Mfsd4a (ENSMAUG00000007980) #23	Elk4 (ENSMAUG00000015854) #24	ENSMAUG00000014495 #25	Nucks1 (ENSMAUG00000020322) #26	Rab29 (ENSMAUG00000017388) #27	Slc41a1 (ENSMAUG00000014467) #28	ENSMAUG00000001067 #29
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT00390000014507.b	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Prairie vole	MODERN SPECIES	14	Golt1a (ENSMOCG00000017873)	Plekha6 (ENSMOCG00000019638) #8	Ppp1r15b (ENSMOCG00000021507) #9	Pik3c2b (ENSMOCG00000019428) #10	Mdm4 (ENSMOCG00000002099) #11	Lrrn2 (ENSMOCG00000014938) #12	Nfasc (ENSMOCG00000001737) #13	ENSMOCG00000001856	Cntn2 (ENSMOCG00000020328) #14	Rbbp5 (ENSMOCG00000014868) #16	Dstyk (ENSMOCG00000018297) #17	Tmcc2 (ENSMOCG00000014046) #18	Nuak2 (ENSMOCG00000020262) #19	Klhdc8a (ENSMOCG00000002500) #20	Lemd1 (ENSMOCG00000001367) #21	Cdk18 (ENSMOCG00000012764) #22	Mfsd4a (ENSMOCG00000002624) #23	Elk4 (ENSMOCG00000016511) #24	ENSMOCG00000000796 #25	Nucks1 (ENSMOCG00000016010) #26	Rab29 (ENSMOCG00000020169) #27	Slc41a1 (ENSMOCG00000015231) #28	Pm20d1 (ENSMOCG00000012510) #29	Slc26a9 (ENSMOCG00000018169) #30	Ctse (ENSMOCG00000006549) #32	Avpr1b (ENSMOCG00000002679) #33	Fam72a (ENSMOCG00000021923) #34	Srgap2 (ENSMOCG00000011026) #35	Ikbke (ENSMOCG00000002899) #36	Rassf5 (ENSMOCG00000008332) #37	Eif2d (ENSMOCG00000015872)
Northern American deer mouse	MODERN SPECIES	2	Golt1a (ENSPEMG00000007562)	Plekha6 (ENSPEMG00000000750) #8	Ppp1r15b (ENSPEMG00000010981) #9	Pik3c2b (ENSPEMG00000007478) #10	Mdm4 (ENSPEMG00000018483) #11	Lrrn2 (ENSPEMG00000010135) #12	Nfasc (ENSPEMG00000001323) #13	Cntn2 (ENSPEMG00000020849) #14	Tmem81 (ENSPEMG00000029756) #15	Rbbp5 (ENSPEMG00000000033) #16	Dstyk (ENSPEMG00000022259) #17	Tmcc2 (ENSPEMG00000017022) #18	Nuak2 (ENSPEMG00000021423) #19	Klhdc8a (ENSPEMG00000030196) #20	ENSPEMG00000001893	Cdk18 (ENSPEMG00000007346) #22	Mfsd4a (ENSPEMG00000017073) #23	Elk4 (ENSPEMG00000020762) #24	Slc45a3 (ENSPEMG00000022886) #25	Nucks1 (ENSPEMG00000023850) #26	Rab29 (ENSPEMG00000031264) #27	Slc41a1 (ENSPEMG00000030722) #28	Pm20d1 (ENSPEMG00000020741) #29	Slc26a9 (ENSPEMG00000020888) #30	Rab7b (ENSPEMG00000022869) #31	Ctse (ENSPEMG00000021253) #32	Avpr1b (ENSPEMG00000023110) #33	Fam72a (ENSPEMG00000018481) #34	Srgap2 (ENSPEMG00000014419) #35	Ikbke (ENSPEMG00000001718) #36	Rassf5 (ENSPEMG00000014551) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1835							Nfasc (ENSNGAG00000020322) #13	Cntn2 (ENSNGAG00000013795) #14	Tmem81 (ENSNGAG00000015221) #15	Rbbp5 (ENSNGAG00000004415) #16	Dstyk (ENSNGAG00000003016) #17	Tmcc2 (ENSNGAG00000016272) #18	Nuak2 (ENSNGAG00000016980) #19	Klhdc8a (ENSNGAG00000012079) #20	Lemd1 (ENSNGAG00000008898) #21	Cdk18 (ENSNGAG00000008265) #22	Mfsd4a (ENSNGAG00000018968) #23	Elk4 (ENSNGAG00000016471) #24	ENSNGAG00000000141 #25	ENSNGAG00000015945	ENSNGAG00000010016 #26	Rab29 (ENSNGAG00000015383) #27	Slc41a1 (ENSNGAG00000011919) #28	Pm20d1 (ENSNGAG00000000944) #29	Slc26a9 (ENSNGAG00000012565) #30	ENSNGAG00000019005 #31	Ctse (ENSNGAG00000017938) #32	Avpr1b (ENSNGAG00000005328) #33	Fam72a (ENSNGAG00000000297) #34	Srgap2 (ENSNGAG00000017369) #35	Ikbke (ENSNGAG00000018023) #36
Kangaroo rat	MODERN SPECIES	354	ENSDORG00000003414 #7	Golt1a (ENSDORG00000003415)	Plekha6 (ENSDORG00000003416) #8	Ppp1r15b (ENSDORG00000028377) #9	Pik3c2b (ENSDORG00000006835) #10	ENSDORG00000023943	Mdm4 (ENSDORG00000006873) #11	Lrrn2 (ENSDORG00000008526) #12	Nfasc (ENSDORG00000011731) #13	Cntn2 (ENSDORG00000014240) #14	Rbbp5 (ENSDORG00000014245) #16	Dstyk (ENSDORG00000014247) #17	Tmcc2 (ENSDORG00000014248) #18	Nuak2 (ENSDORG00000013111) #19	Klhdc8a (ENSDORG00000013119) #20	Cdk18 (ENSDORG00000014662) #22	Mfsd4a (ENSDORG00000009272) #23	Elk4 (ENSDORG00000009275) #24	Slc45a3 (ENSDORG00000009276) #25	ENSDORG00000003183 #26	Rab29 (ENSDORG00000011635) #27	Slc41a1 (ENSDORG00000015757) #28	Pm20d1 (ENSDORG00000015758) #29	Slc26a9 (ENSDORG00000015759) #30	Rab7b (ENSDORG00000023346) #31	Ctse (ENSDORG00000015761) #32	Avpr1b (ENSDORG00000013289) #33	Fam72a (ENSDORG00000012916) #34	Srgap2 (ENSDORG00000012918) #35	Ikbke (ENSDORG00000012920) #36	Rassf5 (ENSDORG00000012923) #37
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256312	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36
Hystricomorpha	ANCESTRAL SPECIES	29	ENSGT00390000014507.b	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36
Naked mole-rat female	MODERN SPECIES	16	GOLT1A (ENSHGLG00000005741)	PLEKHA6 (ENSHGLG00000003457) #8	PPP1R15B (ENSHGLG00000010479) #9	PIK3C2B (ENSHGLG00000008940) #10	MDM4 (ENSHGLG00000040409) #11	LRRN2 (ENSHGLG00000047392) #12	NFASC (ENSHGLG00000008978) #13	CNTN2 (ENSHGLG00000019314) #14	TMEM81 (ENSHGLG00000009323) #15	RBBP5 (ENSHGLG00000008643) #16	DSTYK (ENSHGLG00000006608) #17	TMCC2 (ENSHGLG00000007340) #18	NUAK2 (ENSHGLG00000018780) #19	KLHDC8A (ENSHGLG00000042583) #20	ENSHGLG00000030280	CDK18 (ENSHGLG00000015315) #22	MFSD4A (ENSHGLG00000009280) #23	ELK4 (ENSHGLG00000006206) #24	SLC45A3 (ENSHGLG00000005465) #25	ENSHGLG00000049818	ENSHGLG00000015004 #26	RAB29 (ENSHGLG00000039555) #27	SLC41A1 (ENSHGLG00000014413) #28	PM20D1 (ENSHGLG00000019232) #29	SLC26A9 (ENSHGLG00000013130) #30	RAB7B (ENSHGLG00000005045) #31	ENSHGLG00000007519	CTSE (ENSHGLG00000003917) #32	RHEX (ENSHGLG00000039072)	AVPR1B (ENSHGLG00000003446) #33	ENSHGLG00000008162 #34
Hystricomorpha_a	ANCESTRAL SPECIES	13	ENSGT00390000014507.b	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36
Guinea pig	MODERN SPECIES	12	KISS1 (ENSCPOG00000032840) #7	GOLT1A (ENSCPOG00000004206)	PLEKHA6 (ENSCPOG00000011824) #8	PPP1R15B (ENSCPOG00000005954) #9	PIK3C2B (ENSCPOG00000005959) #10	MDM4 (ENSCPOG00000008227) #11	LRRN2 (ENSCPOG00000026151) #12	NFASC (ENSCPOG00000011736) #13	CNTN2 (ENSCPOG00000011751) #14	ENSCPOG00000011763 #16	DSTYK (ENSCPOG00000011764) #17	TMCC2 (ENSCPOG00000011772) #18	NUAK2 (ENSCPOG00000011773) #19	KLHDC8A (ENSCPOG00000020319) #20	ENSCPOG00000005220 #21	CDK18 (ENSCPOG00000005224) #22	MFSD4A (ENSCPOG00000014691) #23	ELK4 (ENSCPOG00000010980) #24	SLC45A3 (ENSCPOG00000022526) #25	NUCKS1 (ENSCPOG00000003127) #26	RAB29 (ENSCPOG00000008498) #27	SLC41A1 (ENSCPOG00000007233) #28	PM20D1 (ENSCPOG00000007241) #29	SLC26A9 (ENSCPOG00000009513) #30	RAB7B (ENSCPOG00000024342) #31	CTSE (ENSCPOG00000009523) #32	RHEX (ENSCPOG00000038577)	AVPR1B (ENSCPOG00000036821) #33	ENSCPOG00000006809 #34	ENSCPOG00000008917 #35	IKBKE (ENSCPOG00000008923) #36
Hystricomorpha_b	ANCESTRAL SPECIES	4	ENSGT00390000008827 #7	ENSGT00390000014507.b	ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36
Long-tailed chinchilla	MODERN SPECIES	113	KISS1 (ENSCLAG00000017136) #7	GOLT1A (ENSCLAG00000015523)	PLEKHA6 (ENSCLAG00000011288) #8	PPP1R15B (ENSCLAG00000012864) #9	PIK3C2B (ENSCLAG00000013032) #10	MDM4 (ENSCLAG00000011995) #11	NFASC (ENSCLAG00000012040) #13	CNTN2 (ENSCLAG00000011919) #14	TMEM81 (ENSCLAG00000013114) #15	RBBP5 (ENSCLAG00000014383) #16	DSTYK (ENSCLAG00000014831) #17	TMCC2 (ENSCLAG00000016468) #18	NUAK2 (ENSCLAG00000012570) #19	KLHDC8A (ENSCLAG00000015610) #20	LEMD1 (ENSCLAG00000015190) #21	CDK18 (ENSCLAG00000010383) #22	MFSD4A (ENSCLAG00000013803) #23	ELK4 (ENSCLAG00000012506) #24	SLC45A3 (ENSCLAG00000014118) #25	NUCKS1 (ENSCLAG00000017127) #26	RAB29 (ENSCLAG00000010484) #27	SLC41A1 (ENSCLAG00000010933) #28	PM20D1 (ENSCLAG00000012926) #29	SLC26A9 (ENSCLAG00000012220) #30	RAB7B (ENSCLAG00000012958) #31	CTSE (ENSCLAG00000012938) #32	RHEX (ENSCLAG00000013012)	AVPR1B (ENSCLAG00000013862) #33	ENSCLAG00000014908 #34	ENSCLAG00000012031 #35	IKBKE (ENSCLAG00000013208) #36
Degu	MODERN SPECIES	172						ENSODEG00000019135	ENSODEG00000005507	NFASC (ENSODEG00000006271) #13	CNTN2 (ENSODEG00000005095) #14	RBBP5 (ENSODEG00000005136) #16	DSTYK (ENSODEG00000007490) #17	TMCC2 (ENSODEG00000005555) #18	NUAK2 (ENSODEG00000006060) #19	KLHDC8A (ENSODEG00000006709) #20	ENSODEG00000005112 #21	CDK18 (ENSODEG00000005608) #22	MFSD4A (ENSODEG00000005247) #23	ELK4 (ENSODEG00000006084) #24	ENSODEG00000019457	SLC45A3 (ENSODEG00000007692) #25	ENSODEG00000005090 #26	RAB29 (ENSODEG00000006357) #27	SLC41A1 (ENSODEG00000006495) #28	PM20D1 (ENSODEG00000005792) #29	SLC26A9 (ENSODEG00000005539) #30	RAB7B (ENSODEG00000005589) #31	CTSE (ENSODEG00000005548) #32	AVPR1B (ENSODEG00000006394) #33	ENSODEG00000005913 #34	ENSODEG00000007417 #35	IKBKE (ENSODEG00000005963) #36
Sciuridae	ANCESTRAL SPECIES		ENSGT00940000159692 #8	ENSGT00940000154404.b #9	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256312	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36
Marmotini	ANCESTRAL SPECIES	21							ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36
Marmotini_b	ANCESTRAL SPECIES	63							ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36
Arctic ground squirrel	MODERN SPECIES	49							NFASC (ENSUPAG00010013868) #13	CNTN2 (ENSUPAG00010014130) #14	TMEM81 (ENSUPAG00010014151) #15	RBBP5 (ENSUPAG00010014156) #16	DSTYK (ENSUPAG00010014219) #17	TMCC2 (ENSUPAG00010014257) #18	NUAK2 (ENSUPAG00010014287) #19	KLHDC8A (ENSUPAG00010014297) #20	LEMD1 (ENSUPAG00010014304) #21	CDK18 (ENSUPAG00010014325) #22	MFSD4A (ENSUPAG00010014359) #23	ELK4 (ENSUPAG00010014446) #24	SLC45A3 (ENSUPAG00010014458) #25	NUCKS1 (ENSUPAG00010014469) #26	RAB29 (ENSUPAG00010014481) #27	SLC41A1 (ENSUPAG00010014492) #28	PM20D1 (ENSUPAG00010014516) #29	SLC26A9 (ENSUPAG00010014561) #30	RAB7B (ENSUPAG00010014589) #31	CTSE (ENSUPAG00010014670) #32	ENSUPAG00010014715	AVPR1B (ENSUPAG00010014724) #33	ENSUPAG00010014738 #34	ENSUPAG00010014755 #35	IKBKE (ENSUPAG00010014821) #36
Squirrel	MODERN SPECIES	157								NFASC (ENSSTOG00000002615) #13	CNTN2 (ENSSTOG00000004555) #14	RBBP5 (ENSSTOG00000002654) #16	DSTYK (ENSSTOG00000002673) #17	TMCC2 (ENSSTOG00000002699) #18	NUAK2 (ENSSTOG00000026121) #19	KLHDC8A (ENSSTOG00000011283) #20	ENSSTOG00000034719 #21	CDK18 (ENSSTOG00000028817) #22	MFSD4A (ENSSTOG00000014788) #23	ELK4 (ENSSTOG00000014796) #24	SLC45A3 (ENSSTOG00000007068) #25	NUCKS1 (ENSSTOG00000009264) #26	RAB29 (ENSSTOG00000009275) #27	SLC41A1 (ENSSTOG00000009287) #28	PM20D1 (ENSSTOG00000009299) #29	SLC26A9 (ENSSTOG00000007661) #30	RAB7B (ENSSTOG00000020708) #31	CTSE (ENSSTOG00000009579) #32	AVPR1B (ENSSTOG00000027172) #33	ENSSTOG00000027769 #34	ENSSTOG00000006198 #35	ENSSTOG00000021544 #36	RASSF5 (ENSSTOG00000006317) #37
Alpin marmot	MODERN SPECIES	12	ZBTB41 (ENSMMMG00000004938)	ENSMMMG00000004895	F13B (ENSMMMG00000004870)	ENSMMMG00000004823	ENSMMMG00000004816	ENSMMMG00000004813	NFASC (ENSMMMG00000004534) #13	CNTN2 (ENSMMMG00000004499) #14	TMEM81 (ENSMMMG00000004488) #15	RBBP5 (ENSMMMG00000004421) #16	DSTYK (ENSMMMG00000004344) #17	TMCC2 (ENSMMMG00000004302) #18	NUAK2 (ENSMMMG00000004276) #19	KLHDC8A (ENSMMMG00000004257) #20	LEMD1 (ENSMMMG00000004248) #21	CDK18 (ENSMMMG00000004179) #22	MFSD4A (ENSMMMG00000004071) #23	ELK4 (ENSMMMG00000004051) #24	SLC45A3 (ENSMMMG00000004036) #25	NUCKS1 (ENSMMMG00000004012) #26	RAB29 (ENSMMMG00000004000) #27	SLC41A1 (ENSMMMG00000003973) #28	PM20D1 (ENSMMMG00000003926) #29	SLC26A9 (ENSMMMG00000003875) #30	RAB7B (ENSMMMG00000003773) #31	CTSE (ENSMMMG00000003747) #32	RHEX (ENSMMMG00000003734)	AVPR1B (ENSMMMG00000003719) #33	ENSMMMG00000003704 #34	ENSMMMG00000003630 #35	IKBKE (ENSMMMG00000003569) #36
Eurasian red squirrel	MODERN SPECIES	3	PPP1R15B (ENSSVLG00005007196) #9	PIK3C2B (ENSSVLG00005007149) #10	MDM4 (ENSSVLG00005006908) #11	LRRN2 (ENSSVLG00005006839) #12	NFASC (ENSSVLG00005006491) #13	CNTN2 (ENSSVLG00005006288) #14	TMEM81 (ENSSVLG00005006251) #15	RBBP5 (ENSSVLG00005006207) #16	ENSSVLG00005006171	DSTYK (ENSSVLG00005006109) #17	TMCC2 (ENSSVLG00005005955) #18	NUAK2 (ENSSVLG00005005904) #19	KLHDC8A (ENSSVLG00005005877) #20	LEMD1 (ENSSVLG00005005835) #21	ENSSVLG00005005816	CDK18 (ENSSVLG00005005665) #22	MFSD4A (ENSSVLG00005005415) #23	ELK4 (ENSSVLG00005005363) #24	SLC45A3 (ENSSVLG00005024932) #25	NUCKS1 (ENSSVLG00005024900) #26	RAB29 (ENSSVLG00005024859) #27	SLC41A1 (ENSSVLG00005024830) #28	PM20D1 (ENSSVLG00005024768) #29	SLC26A9 (ENSSVLG00005024704) #30	RAB7B (ENSSVLG00005024662) #31	CTSE (ENSSVLG00005024594) #32	RHEX (ENSSVLG00005024556)	AVPR1B (ENSSVLG00005024532) #33	ENSSVLG00005024519	ENSSVLG00005024444 #34	ENSSVLG00005024367 #35
Lagomorpha	ANCESTRAL SPECIES	15	ENSGT00390000008827 #7	ENSGT00390000014507.b	ENSGT00940000159692 #8	ENSGT00940000158263 #10	ENSGT00530000063539.a #11	ENSGT00940000161204 #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256312	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37	ENSGT00550000074865
Rabbit	MODERN SPECIES	7	PLEKHA6 (ENSOCUG00000007055) #8	PIK3C2B (ENSOCUG00000008052) #10	MDM4 (ENSOCUG00000000005) #11	LRRN2 (ENSOCUG00000010352) #12	NFASC (ENSOCUG00000015363) #13	CNTN2 (ENSOCUG00000015404) #14	ENSOCUG00000030182	RBBP5 (ENSOCUG00000000095) #16	DSTYK (ENSOCUG00000000097) #17	TMCC2 (ENSOCUG00000001246) #18	ENSOCUG00000002381	NUAK2 (ENSOCUG00000002318) #19	KLHDC8A (ENSOCUG00000023010) #20	LEMD1 (ENSOCUG00000009235) #21	ENSOCUG00000031274	CDK18 (ENSOCUG00000009635) #22	MFSD4A (ENSOCUG00000001241) #23	ELK4 (ENSOCUG00000014477) #24	SLC45A3 (ENSOCUG00000025013) #25	NUCKS1 (ENSOCUG00000014895) #26	RAB29 (ENSOCUG00000000426) #27	SLC41A1 (ENSOCUG00000028187) #28	PM20D1 (ENSOCUG00000000427) #29	SLC26A9 (ENSOCUG00000022624) #30	CTSE (ENSOCUG00000001856) #32	ENSOCUG00000035554	AVPR1B (ENSOCUG00000007352) #33	ENSOCUG00000022194 #34	ENSOCUG00000012175 #35	RASSF5 (ENSOCUG00000015444) #37	EIF2D (ENSOCUG00000015451)
Pika	MODERN SPECIES	495																CDK18 (ENSOPRG00000006312) #22	MFSD4A (ENSOPRG00000006324) #23	ELK4 (ENSOPRG00000006348) #24	SLC45A3 (ENSOPRG00000006354) #25	NUCKS1 (ENSOPRG00000006364) #26	RAB29 (ENSOPRG00000006372) #27	SLC41A1 (ENSOPRG00000006378) #28	PM20D1 (ENSOPRG00000006393) #29	SLC26A9 (ENSOPRG00000006404) #30
Tree shrew	MODERN SPECIES	4631															LEMD1 (ENSTBEG00000003922) #21	CDK18 (ENSTBEG00000003959) #22	ENSTBEG00000004046 #23