Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000159692 #7	ENSGT00940000154404.b #8	ENSGT00940000158263 #9	ENSGT00530000063539.a #10	ENSGT00940000161204 #11	ENSGT00940000157024 #12	ENSGT00940000159193 #13	ENSGT00390000006349 #14	ENSGT00530000064100 #15	ENSGT00840000129948 #16	ENSGT00940000158314 #17	ENSGT00940000158422.a #18	ENSGT00940000160742 #19	ENSGT00860000136208 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000159692 #7	ENSGT00940000154404.b #8	ENSGT00940000158263 #9	ENSGT00530000063539.a.qb #10	ENSGT00940000161204 #11	ENSGT00940000157024 #12	ENSGT00940000159193 #13	ENSGT00390000006349 #14	ENSGT00530000064100 #15	ENSGT00840000129948 #16	ENSGT00940000158314 #17	ENSGT00940000158422.a #18	ENSGT00940000160742 #19	ENSGT00860000136208 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000159692 #7	ENSGT00940000154404.b #8	ENSGT00940000158263 #9	ENSGT00530000063539.a.qb #10	ENSGT00940000161204 #11	ENSGT00940000157024 #12	ENSGT00940000159193 #13	ENSGT00390000006349 #14	ENSGT00530000064100 #15	ENSGT00840000129948 #16	ENSGT00940000158314 #17	ENSGT00940000158422.a #18	ENSGT00940000160742 #19	ENSGT00860000136208 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #33	ENSGT00390000005106 #34	ENSGT00950000182824.a.a.b.b #35	ENSGT00950000182937.B.a #36	ENSGT00940000159288 #37
spretus	MODERN SPECIES		Plekha6 (MGP_SPRETEiJ_G0015403) #7	Ppp1r15b (MGP_SPRETEiJ_G0015402) #8	Pik3c2b (MGP_SPRETEiJ_G0015401) #9	Mdm4 (MGP_SPRETEiJ_G0015400) #10	Lrrn2 (MGP_SPRETEiJ_G0015399) #11	Nfasc (MGP_SPRETEiJ_G0015398) #12	Cntn2 (MGP_SPRETEiJ_G0015397) #13	Tmem81 (MGP_SPRETEiJ_G0015396) #14	Rbbp5 (MGP_SPRETEiJ_G0015395) #15	Dstyk (MGP_SPRETEiJ_G0015394) #16	Tmcc2 (MGP_SPRETEiJ_G0015393) #17	Nuak2 (MGP_SPRETEiJ_G0015392) #18	Klhdc8a (MGP_SPRETEiJ_G0015391) #19	MGP_SPRETEiJ_G0015390 #20	Lemd1 (MGP_SPRETEiJ_G0015389) #21	Cdk18 (MGP_SPRETEiJ_G0015388) #22	Mfsd4a (MGP_SPRETEiJ_G0015387) #23	Elk4 (MGP_SPRETEiJ_G0015386) #24	Slc45a3 (MGP_SPRETEiJ_G0015385) #25	Nucks1 (MGP_SPRETEiJ_G0015384) #26	Rab29 (MGP_SPRETEiJ_G0015383) #27	Slc41a1 (MGP_SPRETEiJ_G0015382) #28	Pm20d1 (MGP_SPRETEiJ_G0015381) #29	Slc26a9 (MGP_SPRETEiJ_G0015380) #30	Rab7b (MGP_SPRETEiJ_G0015379) #31	Ctse (MGP_SPRETEiJ_G0015378) #32	Avpr1b (MGP_SPRETEiJ_G0015377) #33	Fam72a (MGP_SPRETEiJ_G0015376) #34	MGP_SPRETEiJ_G0015375 #35	Ikbke (MGP_SPRETEiJ_G0015374) #36	Rassf5 (MGP_SPRETEiJ_G0015373) #37
Steppe mouse	MODERN SPECIES	226	Plekha6 (ENSMSIG00000022432) #7	Ppp1r15b (ENSMSIG00000022727) #8	Pik3c2b (ENSMSIG00000022736) #9	Mdm4 (ENSMSIG00000022799) #10	Lrrn2 (ENSMSIG00000022899) #11	Nfasc (ENSMSIG00000022913) #12	Cntn2 (ENSMSIG00000023282) #13	Tmem81 (ENSMSIG00000023304) #14	ENSMSIG00000023311	Rbbp5 (ENSMSIG00000023316) #15	Dstyk (ENSMSIG00000023415) #16	Tmcc2 (ENSMSIG00000023478) #17	Nuak2 (ENSMSIG00000023512) #18	Klhdc8a (ENSMSIG00000023550) #19	Lemd1 (ENSMSIG00000023579) #21	Cdk18 (ENSMSIG00000023626) #22	Mfsd4a (ENSMSIG00000023701) #23	Elk4 (ENSMSIG00000024131) #24	Slc45a3 (ENSMSIG00000024139) #25	Nucks1 (ENSMSIG00000024170) #26	Rab29 (ENSMSIG00000024195) #27	Slc41a1 (ENSMSIG00000024239) #28	Pm20d1 (ENSMSIG00000024275) #29	Slc26a9 (ENSMSIG00000024339) #30	Rab7b (ENSMSIG00000024381) #31	Ctse (ENSMSIG00000024459) #32	ENSMSIG00000024497	Avpr1b (ENSMSIG00000024504) #33	Fam72a (ENSMSIG00000024508) #34	Srgap2 (ENSMSIG00000024516) #35	Ikbke (ENSMSIG00000024599) #36
Mouse	MODERN SPECIES		Plekha6 (ENSMUSG00000041757) #7	Ppp1r15b (ENSMUSG00000046062) #8	Pik3c2b (ENSMUSG00000026447) #9	Mdm4 (ENSMUSG00000054387) #10	Lrrn2 (ENSMUSG00000026443) #11	Nfasc (ENSMUSG00000026442) #12	Cntn2 (ENSMUSG00000053024) #13	Tmem81 (ENSMUSG00000048174) #14	Rbbp5 (ENSMUSG00000026439) #15	Dstyk (ENSMUSG00000042046) #16	Tmcc2 (ENSMUSG00000042066) #17	Nuak2 (ENSMUSG00000009772) #18	Klhdc8a (ENSMUSG00000042115) #19	Gm29695 (ENSMUSG00000118219)	Lemd1 (ENSMUSG00000079330) #21	Cdk18 (ENSMUSG00000026437) #22	Mfsd4a (ENSMUSG00000059149) #23	Elk4 (ENSMUSG00000026436) #24	Slc45a3 (ENSMUSG00000026435) #25	Nucks1 (ENSMUSG00000026434) #26	Rab29 (ENSMUSG00000026433) #27	Slc41a1 (ENSMUSG00000013275) #28	Pm20d1 (ENSMUSG00000042251) #29	Slc26a9 (ENSMUSG00000042268) #30	Rab7b (ENSMUSG00000052688) #31	Ctse (ENSMUSG00000004552) #32	Avpr1b (ENSMUSG00000026432) #33	Fam72a (ENSMUSG00000055184) #34	Srgap2 (ENSMUSG00000026425) #35	Ikbke (ENSMUSG00000042349) #36	Rassf5 (ENSMUSG00000026430) #37
Ryukyu mouse	MODERN SPECIES		Plekha6 (MGP_CAROLIEiJ_G0014596) #7	Ppp1r15b (MGP_CAROLIEiJ_G0014595) #8	Pik3c2b (MGP_CAROLIEiJ_G0014594) #9	Mdm4 (MGP_CAROLIEiJ_G0014593) #10	Lrrn2 (MGP_CAROLIEiJ_G0014592) #11	Nfasc (MGP_CAROLIEiJ_G0014591) #12	Cntn2 (MGP_CAROLIEiJ_G0014590) #13	Tmem81 (MGP_CAROLIEiJ_G0014589) #14	Rbbp5 (MGP_CAROLIEiJ_G0014588) #15	Dstyk (MGP_CAROLIEiJ_G0014587) #16	Tmcc2 (MGP_CAROLIEiJ_G0014586) #17	Nuak2 (MGP_CAROLIEiJ_G0014585) #18	Klhdc8a (MGP_CAROLIEiJ_G0014584) #19	MGP_CAROLIEiJ_G0014583 #20	Lemd1 (MGP_CAROLIEiJ_G0014582) #21	Cdk18 (MGP_CAROLIEiJ_G0014581) #22	Mfsd4a (MGP_CAROLIEiJ_G0014580) #23	Elk4 (MGP_CAROLIEiJ_G0014579) #24	Slc45a3 (MGP_CAROLIEiJ_G0014578) #25	Nucks1 (MGP_CAROLIEiJ_G0014577) #26	Slc26a9 (MGP_CAROLIEiJ_G0014576) #30	Rab7b (MGP_CAROLIEiJ_G0014575) #31	Ctse (MGP_CAROLIEiJ_G0014574) #32	Avpr1b (MGP_CAROLIEiJ_G0014573) #33	Fam72a (MGP_CAROLIEiJ_G0014572) #34	MGP_CAROLIEiJ_G0014571 #35	Ikbke (MGP_CAROLIEiJ_G0014570) #36	Rassf5 (MGP_CAROLIEiJ_G0014569) #37	Eif2d (MGP_CAROLIEiJ_G0014568)	MGP_CAROLIEiJ_G0014567	Mapkapk2 (MGP_CAROLIEiJ_G0014566)