Murinae	ANCESTRAL SPECIES	11	ENSGT00390000014507.b	ENSGT00940000159692 #7	ENSGT00940000154404.b #8	ENSGT00940000158263 #9	ENSGT00530000063539.a #10	ENSGT00940000161204 #11	ENSGT00940000157024 #12	ENSGT00940000159193 #13	ENSGT00390000006349 #14	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Mus	ANCESTRAL SPECIES	5	ENSGT00390000014507.b.a.a	ENSGT00940000159692 #7	ENSGT00940000154404.b #8	ENSGT00940000158263 #9	ENSGT00530000063539.a #10	ENSGT00940000161204 #11	ENSGT00940000157024 #12	ENSGT00940000159193 #13	ENSGT00390000006349 #14	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000159692 #7	ENSGT00940000154404.b #8	ENSGT00940000158263 #9	ENSGT00530000063539.a #10	ENSGT00940000161204 #11	ENSGT00940000157024 #12	ENSGT00940000159193 #13	ENSGT00390000006349 #14	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00860000136208	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000159692 #7	ENSGT00940000154404.b #8	ENSGT00940000158263 #9	ENSGT00530000063539.a.qb #10	ENSGT00940000161204 #11	ENSGT00940000157024 #12	ENSGT00940000159193 #13	ENSGT00390000006349 #14	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00860000136208	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000159692 #7	ENSGT00940000154404.b #8	ENSGT00940000158263 #9	ENSGT00530000063539.a.qb #10	ENSGT00940000161204 #11	ENSGT00940000157024 #12	ENSGT00940000159193 #13	ENSGT00390000006349 #14	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00860000136208	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Steppe mouse	MODERN SPECIES	226	Plekha6 (ENSMSIG00000022432) #7	Ppp1r15b (ENSMSIG00000022727) #8	Pik3c2b (ENSMSIG00000022736) #9	Mdm4 (ENSMSIG00000022799) #10	Lrrn2 (ENSMSIG00000022899) #11	Nfasc (ENSMSIG00000022913) #12	Cntn2 (ENSMSIG00000023282) #13	Tmem81 (ENSMSIG00000023304) #14	ENSMSIG00000023311 #15	Rbbp5 (ENSMSIG00000023316) #16	Dstyk (ENSMSIG00000023415) #17	Tmcc2 (ENSMSIG00000023478) #18	Nuak2 (ENSMSIG00000023512) #19	Klhdc8a (ENSMSIG00000023550) #20	Lemd1 (ENSMSIG00000023579) #21	Cdk18 (ENSMSIG00000023626) #22	Mfsd4a (ENSMSIG00000023701) #23	Elk4 (ENSMSIG00000024131) #24	Slc45a3 (ENSMSIG00000024139) #25	Nucks1 (ENSMSIG00000024170) #26	Rab29 (ENSMSIG00000024195) #27	Slc41a1 (ENSMSIG00000024239) #28	Pm20d1 (ENSMSIG00000024275) #29	Slc26a9 (ENSMSIG00000024339) #30	Rab7b (ENSMSIG00000024381) #31	Ctse (ENSMSIG00000024459) #32	ENSMSIG00000024497 #33	Avpr1b (ENSMSIG00000024504) #34	Fam72a (ENSMSIG00000024508) #35	Srgap2 (ENSMSIG00000024516) #36	Ikbke (ENSMSIG00000024599) #37
spretus	MODERN SPECIES		Plekha6 (MGP_SPRETEiJ_G0015403) #7	Ppp1r15b (MGP_SPRETEiJ_G0015402) #8	Pik3c2b (MGP_SPRETEiJ_G0015401) #9	Mdm4 (MGP_SPRETEiJ_G0015400) #10	Lrrn2 (MGP_SPRETEiJ_G0015399) #11	Nfasc (MGP_SPRETEiJ_G0015398) #12	Cntn2 (MGP_SPRETEiJ_G0015397) #13	Tmem81 (MGP_SPRETEiJ_G0015396) #14	Rbbp5 (MGP_SPRETEiJ_G0015395) #16	Dstyk (MGP_SPRETEiJ_G0015394) #17	Tmcc2 (MGP_SPRETEiJ_G0015393) #18	Nuak2 (MGP_SPRETEiJ_G0015392) #19	Klhdc8a (MGP_SPRETEiJ_G0015391) #20	MGP_SPRETEiJ_G0015390	Lemd1 (MGP_SPRETEiJ_G0015389) #21	Cdk18 (MGP_SPRETEiJ_G0015388) #22	Mfsd4a (MGP_SPRETEiJ_G0015387) #23	Elk4 (MGP_SPRETEiJ_G0015386) #24	Slc45a3 (MGP_SPRETEiJ_G0015385) #25	Nucks1 (MGP_SPRETEiJ_G0015384) #26	Rab29 (MGP_SPRETEiJ_G0015383) #27	Slc41a1 (MGP_SPRETEiJ_G0015382) #28	Pm20d1 (MGP_SPRETEiJ_G0015381) #29	Slc26a9 (MGP_SPRETEiJ_G0015380) #30	Rab7b (MGP_SPRETEiJ_G0015379) #31	Ctse (MGP_SPRETEiJ_G0015378) #32	Avpr1b (MGP_SPRETEiJ_G0015377) #34	Fam72a (MGP_SPRETEiJ_G0015376) #35	MGP_SPRETEiJ_G0015375 #36	Ikbke (MGP_SPRETEiJ_G0015374) #37	Rassf5 (MGP_SPRETEiJ_G0015373)
Mouse	MODERN SPECIES		Plekha6 (ENSMUSG00000041757) #7	Ppp1r15b (ENSMUSG00000046062) #8	Pik3c2b (ENSMUSG00000026447) #9	Mdm4 (ENSMUSG00000054387) #10	Lrrn2 (ENSMUSG00000026443) #11	Nfasc (ENSMUSG00000026442) #12	Cntn2 (ENSMUSG00000053024) #13	Tmem81 (ENSMUSG00000048174) #14	Rbbp5 (ENSMUSG00000026439) #16	Dstyk (ENSMUSG00000042046) #17	Tmcc2 (ENSMUSG00000042066) #18	Nuak2 (ENSMUSG00000009772) #19	Klhdc8a (ENSMUSG00000042115) #20	Gm29695 (ENSMUSG00000118219)	Lemd1 (ENSMUSG00000079330) #21	Cdk18 (ENSMUSG00000026437) #22	Mfsd4a (ENSMUSG00000059149) #23	Elk4 (ENSMUSG00000026436) #24	Slc45a3 (ENSMUSG00000026435) #25	Nucks1 (ENSMUSG00000026434) #26	Rab29 (ENSMUSG00000026433) #27	Slc41a1 (ENSMUSG00000013275) #28	Pm20d1 (ENSMUSG00000042251) #29	Slc26a9 (ENSMUSG00000042268) #30	Rab7b (ENSMUSG00000052688) #31	Ctse (ENSMUSG00000004552) #32	Avpr1b (ENSMUSG00000026432) #34	Fam72a (ENSMUSG00000055184) #35	Srgap2 (ENSMUSG00000026425) #36	Ikbke (ENSMUSG00000042349) #37	Rassf5 (ENSMUSG00000026430)
Ryukyu mouse	MODERN SPECIES		Plekha6 (MGP_CAROLIEiJ_G0014596) #7	Ppp1r15b (MGP_CAROLIEiJ_G0014595) #8	Pik3c2b (MGP_CAROLIEiJ_G0014594) #9	Mdm4 (MGP_CAROLIEiJ_G0014593) #10	Lrrn2 (MGP_CAROLIEiJ_G0014592) #11	Nfasc (MGP_CAROLIEiJ_G0014591) #12	Cntn2 (MGP_CAROLIEiJ_G0014590) #13	Tmem81 (MGP_CAROLIEiJ_G0014589) #14	Rbbp5 (MGP_CAROLIEiJ_G0014588) #16	Dstyk (MGP_CAROLIEiJ_G0014587) #17	Tmcc2 (MGP_CAROLIEiJ_G0014586) #18	Nuak2 (MGP_CAROLIEiJ_G0014585) #19	Klhdc8a (MGP_CAROLIEiJ_G0014584) #20	MGP_CAROLIEiJ_G0014583	Lemd1 (MGP_CAROLIEiJ_G0014582) #21	Cdk18 (MGP_CAROLIEiJ_G0014581) #22	Mfsd4a (MGP_CAROLIEiJ_G0014580) #23	Elk4 (MGP_CAROLIEiJ_G0014579) #24	Slc45a3 (MGP_CAROLIEiJ_G0014578) #25	Nucks1 (MGP_CAROLIEiJ_G0014577) #26	Slc26a9 (MGP_CAROLIEiJ_G0014576) #30	Rab7b (MGP_CAROLIEiJ_G0014575) #31	Ctse (MGP_CAROLIEiJ_G0014574) #32	Avpr1b (MGP_CAROLIEiJ_G0014573) #34	Fam72a (MGP_CAROLIEiJ_G0014572) #35	MGP_CAROLIEiJ_G0014571 #36	Ikbke (MGP_CAROLIEiJ_G0014570) #37	Rassf5 (MGP_CAROLIEiJ_G0014569)	Eif2d (MGP_CAROLIEiJ_G0014568)	MGP_CAROLIEiJ_G0014567	Mapkapk2 (MGP_CAROLIEiJ_G0014566)
Shrew mouse	MODERN SPECIES	18	MGP_PahariEiJ_G0027833	Plekha6 (MGP_PahariEiJ_G0027832) #7	Ppp1r15b (MGP_PahariEiJ_G0027831) #8	Pik3c2b (MGP_PahariEiJ_G0027830) #9	Mdm4 (MGP_PahariEiJ_G0027829) #10	Lrrn2 (MGP_PahariEiJ_G0027828) #11	Nfasc (MGP_PahariEiJ_G0027827) #12	Cntn2 (MGP_PahariEiJ_G0027826) #13	Tmem81 (MGP_PahariEiJ_G0027825) #14	Rbbp5 (MGP_PahariEiJ_G0027824) #16	Dstyk (MGP_PahariEiJ_G0027823) #17	Tmcc2 (MGP_PahariEiJ_G0027822) #18	Nuak2 (MGP_PahariEiJ_G0027821) #19	Klhdc8a (MGP_PahariEiJ_G0027820) #20	Lemd1 (MGP_PahariEiJ_G0027819) #21	Cdk18 (MGP_PahariEiJ_G0027818) #22	Mfsd4a (MGP_PahariEiJ_G0027817) #23	Elk4 (MGP_PahariEiJ_G0027816) #24	Slc45a3 (MGP_PahariEiJ_G0027815) #25	Nucks1 (MGP_PahariEiJ_G0027814) #26	Rab29 (MGP_PahariEiJ_G0027813) #27	Slc41a1 (MGP_PahariEiJ_G0027812) #28	MGP_PahariEiJ_G0027811 #29	Slc26a9 (MGP_PahariEiJ_G0027810) #30	Rab7b (MGP_PahariEiJ_G0027809) #31	Ctse (MGP_PahariEiJ_G0027808) #32	Avpr1b (MGP_PahariEiJ_G0027807) #34	Fam72a (MGP_PahariEiJ_G0027806) #35	MGP_PahariEiJ_G0027805 #36	Ikbke (MGP_PahariEiJ_G0027804) #37	Rassf5 (MGP_PahariEiJ_G0027803)
Rat	MODERN SPECIES	4	Golt1a (ENSRNOG00000002936)	Plekha6 (ENSRNOG00000002907) #7	Ppp1r15b (ENSRNOG00000028493) #8	Pik3c2b (ENSRNOG00000029938) #9	Mdm4 (ENSRNOG00000009696) #10	Lrrn2 (ENSRNOG00000009691) #11	Nfasc (ENSRNOG00000030515) #12	Cntn2 (ENSRNOG00000009033) #13	Tmem81 (ENSRNOG00000028752) #14	Rbbp5 (ENSRNOG00000021289) #16	Dstyk (ENSRNOG00000021298) #17	Tmcc2 (ENSRNOG00000000033) #18	Nuak2 (ENSRNOG00000000034) #19	Klhdc8a (ENSRNOG00000000036) #20	Lemd1 (ENSRNOG00000051244) #21	Cdk18 (ENSRNOG00000008137) #22	Mfsd4a (ENSRNOG00000024657) #23	Elk4 (ENSRNOG00000007887) #24	Slc45a3 (ENSRNOG00000007591) #25	ENSRNOG00000070926	Nucks1 (ENSRNOG00000047287) #26	Rab29 (ENSRNOG00000049641) #27	Slc41a1 (ENSRNOG00000042320) #28	Pm20d1 (ENSRNOG00000039745) #29	Slc26a9 (ENSRNOG00000029514) #30	Rab7b (ENSRNOG00000039754) #31	Ctse (ENSRNOG00000006963) #32	Avpr1b (ENSRNOG00000048522) #34	Fam72a (ENSRNOG00000042747) #35	Srgap2 (ENSRNOG00000006733) #36	Ikbke (ENSRNOG00000025100) #37