Chordata	ANCESTRAL SPECIES																	ENSGT00940000159482 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000159482 #22
Gnathostomata	ANCESTRAL SPECIES	1568																ENSGT00940000159482 #22	ENSGT00940000178268
Euteleostomi	ANCESTRAL SPECIES	468															ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00940000160742 #20	ENSGT00940000154098.b ##21	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195
Sarcopterygii	ANCESTRAL SPECIES	28	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.b ##21	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Tetrapoda	ANCESTRAL SPECIES	33	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.b ##21	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Amniota	ANCESTRAL SPECIES	26	ENSGT00390000008827 #7	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Mammalia	ANCESTRAL SPECIES	50	ENSGT00390000008827 #7	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Theria	ANCESTRAL SPECIES	12	ENSGT00390000008827 #7	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Eutheria	ANCESTRAL SPECIES		ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266419	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Glires	ANCESTRAL SPECIES		ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256312	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Rodentia	ANCESTRAL SPECIES		ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256312	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256312	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Hystricomorpha	ANCESTRAL SPECIES	29	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Hystricomorpha_a	ANCESTRAL SPECIES	13	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Hystricomorpha_b	ANCESTRAL SPECIES	4	ENSGT00390000008827 #7	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Long-tailed chinchilla	MODERN SPECIES	113	KISS1 (ENSCLAG00000017136) #7	GOLT1A (ENSCLAG00000015523) #8	PLEKHA6 (ENSCLAG00000011288) #9	PPP1R15B (ENSCLAG00000012864) #10	PIK3C2B (ENSCLAG00000013032) #11	MDM4 (ENSCLAG00000011995) #12	NFASC (ENSCLAG00000012040) #13	CNTN2 (ENSCLAG00000011919) #14	TMEM81 (ENSCLAG00000013114) #15	RBBP5 (ENSCLAG00000014383) #16	DSTYK (ENSCLAG00000014831) #17	TMCC2 (ENSCLAG00000016468) #18	NUAK2 (ENSCLAG00000012570) #19	KLHDC8A (ENSCLAG00000015610) #20	LEMD1 (ENSCLAG00000015190) #21	CDK18 (ENSCLAG00000010383) #22	MFSD4A (ENSCLAG00000013803) #23	ELK4 (ENSCLAG00000012506) #24	SLC45A3 (ENSCLAG00000014118) #25	NUCKS1 (ENSCLAG00000017127) #26	RAB29 (ENSCLAG00000010484) #27	SLC41A1 (ENSCLAG00000010933) #28	PM20D1 (ENSCLAG00000012926) #29	SLC26A9 (ENSCLAG00000012220) #30	RAB7B (ENSCLAG00000012958) #31	CTSE (ENSCLAG00000012938) #32	RHEX (ENSCLAG00000013012) #33	AVPR1B (ENSCLAG00000013862) #34	ENSCLAG00000014908 #35	ENSCLAG00000012031 #36	IKBKE (ENSCLAG00000013208) #37
Degu	MODERN SPECIES	172						ENSODEG00000019135	ENSODEG00000005507	NFASC (ENSODEG00000006271) #13	CNTN2 (ENSODEG00000005095) #14	RBBP5 (ENSODEG00000005136) #16	DSTYK (ENSODEG00000007490) #17	TMCC2 (ENSODEG00000005555) #18	NUAK2 (ENSODEG00000006060) #19	KLHDC8A (ENSODEG00000006709) #20	ENSODEG00000005112 #21	CDK18 (ENSODEG00000005608) #22	MFSD4A (ENSODEG00000005247) #23	ELK4 (ENSODEG00000006084) #24	ENSODEG00000019457	SLC45A3 (ENSODEG00000007692) #25	ENSODEG00000005090 #26	RAB29 (ENSODEG00000006357) #27	SLC41A1 (ENSODEG00000006495) #28	PM20D1 (ENSODEG00000005792) #29	SLC26A9 (ENSODEG00000005539) #30	RAB7B (ENSODEG00000005589) #31	CTSE (ENSODEG00000005548) #32	AVPR1B (ENSODEG00000006394) #34	ENSODEG00000005913 #35	ENSODEG00000007417 #36	IKBKE (ENSODEG00000005963) #37
Guinea pig	MODERN SPECIES	12	KISS1 (ENSCPOG00000032840) #7	GOLT1A (ENSCPOG00000004206) #8	PLEKHA6 (ENSCPOG00000011824) #9	PPP1R15B (ENSCPOG00000005954) #10	PIK3C2B (ENSCPOG00000005959) #11	MDM4 (ENSCPOG00000008227) #12	LRRN2 (ENSCPOG00000026151)	NFASC (ENSCPOG00000011736) #13	CNTN2 (ENSCPOG00000011751) #14	ENSCPOG00000011763 #16	DSTYK (ENSCPOG00000011764) #17	TMCC2 (ENSCPOG00000011772) #18	NUAK2 (ENSCPOG00000011773) #19	KLHDC8A (ENSCPOG00000020319) #20	ENSCPOG00000005220 #21	CDK18 (ENSCPOG00000005224) #22	MFSD4A (ENSCPOG00000014691) #23	ELK4 (ENSCPOG00000010980) #24	SLC45A3 (ENSCPOG00000022526) #25	NUCKS1 (ENSCPOG00000003127) #26	RAB29 (ENSCPOG00000008498) #27	SLC41A1 (ENSCPOG00000007233) #28	PM20D1 (ENSCPOG00000007241) #29	SLC26A9 (ENSCPOG00000009513) #30	RAB7B (ENSCPOG00000024342) #31	CTSE (ENSCPOG00000009523) #32	RHEX (ENSCPOG00000038577) #33	AVPR1B (ENSCPOG00000036821) #34	ENSCPOG00000006809 #35	ENSCPOG00000008917 #36	IKBKE (ENSCPOG00000008923) #37
Naked mole-rat female	MODERN SPECIES	16	GOLT1A (ENSHGLG00000005741) #8	PLEKHA6 (ENSHGLG00000003457) #9	PPP1R15B (ENSHGLG00000010479) #10	PIK3C2B (ENSHGLG00000008940) #11	MDM4 (ENSHGLG00000040409) #12	LRRN2 (ENSHGLG00000047392)	NFASC (ENSHGLG00000008978) #13	CNTN2 (ENSHGLG00000019314) #14	TMEM81 (ENSHGLG00000009323) #15	RBBP5 (ENSHGLG00000008643) #16	DSTYK (ENSHGLG00000006608) #17	TMCC2 (ENSHGLG00000007340) #18	NUAK2 (ENSHGLG00000018780) #19	KLHDC8A (ENSHGLG00000042583) #20	ENSHGLG00000030280	CDK18 (ENSHGLG00000015315) #22	MFSD4A (ENSHGLG00000009280) #23	ELK4 (ENSHGLG00000006206) #24	SLC45A3 (ENSHGLG00000005465) #25	ENSHGLG00000049818	ENSHGLG00000015004 #26	RAB29 (ENSHGLG00000039555) #27	SLC41A1 (ENSHGLG00000014413) #28	PM20D1 (ENSHGLG00000019232) #29	SLC26A9 (ENSHGLG00000013130) #30	RAB7B (ENSHGLG00000005045) #31	ENSHGLG00000007519	CTSE (ENSHGLG00000003917) #32	RHEX (ENSHGLG00000039072) #33	AVPR1B (ENSHGLG00000003446) #34	ENSHGLG00000008162 #35
Sciuridae	ANCESTRAL SPECIES		ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256312	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Marmotini	ANCESTRAL SPECIES	21							ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Marmotini_b	ANCESTRAL SPECIES	63							ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Arctic ground squirrel	MODERN SPECIES	49							NFASC (ENSUPAG00010013868) #13	CNTN2 (ENSUPAG00010014130) #14	TMEM81 (ENSUPAG00010014151) #15	RBBP5 (ENSUPAG00010014156) #16	DSTYK (ENSUPAG00010014219) #17	TMCC2 (ENSUPAG00010014257) #18	NUAK2 (ENSUPAG00010014287) #19	KLHDC8A (ENSUPAG00010014297) #20	LEMD1 (ENSUPAG00010014304) #21	CDK18 (ENSUPAG00010014325) #22	MFSD4A (ENSUPAG00010014359) #23	ELK4 (ENSUPAG00010014446) #24	SLC45A3 (ENSUPAG00010014458) #25	NUCKS1 (ENSUPAG00010014469) #26	RAB29 (ENSUPAG00010014481) #27	SLC41A1 (ENSUPAG00010014492) #28	PM20D1 (ENSUPAG00010014516) #29	SLC26A9 (ENSUPAG00010014561) #30	RAB7B (ENSUPAG00010014589) #31	CTSE (ENSUPAG00010014670) #32	ENSUPAG00010014715 #33	AVPR1B (ENSUPAG00010014724) #34	ENSUPAG00010014738 #35	ENSUPAG00010014755 #36	IKBKE (ENSUPAG00010014821) #37
Squirrel	MODERN SPECIES	157								NFASC (ENSSTOG00000002615) #13	CNTN2 (ENSSTOG00000004555) #14	RBBP5 (ENSSTOG00000002654) #16	DSTYK (ENSSTOG00000002673) #17	TMCC2 (ENSSTOG00000002699) #18	NUAK2 (ENSSTOG00000026121) #19	KLHDC8A (ENSSTOG00000011283) #20	ENSSTOG00000034719 #21	CDK18 (ENSSTOG00000028817) #22	MFSD4A (ENSSTOG00000014788) #23	ELK4 (ENSSTOG00000014796) #24	SLC45A3 (ENSSTOG00000007068) #25	NUCKS1 (ENSSTOG00000009264) #26	RAB29 (ENSSTOG00000009275) #27	SLC41A1 (ENSSTOG00000009287) #28	PM20D1 (ENSSTOG00000009299) #29	SLC26A9 (ENSSTOG00000007661) #30	RAB7B (ENSSTOG00000020708) #31	CTSE (ENSSTOG00000009579) #32	AVPR1B (ENSSTOG00000027172) #34	ENSSTOG00000027769 #35	ENSSTOG00000006198 #36	ENSSTOG00000021544 #37	RASSF5 (ENSSTOG00000006317)
Alpin marmot	MODERN SPECIES	12	ZBTB41 (ENSMMMG00000004938)	ENSMMMG00000004895	F13B (ENSMMMG00000004870)	ENSMMMG00000004823	ENSMMMG00000004816	ENSMMMG00000004813	NFASC (ENSMMMG00000004534) #13	CNTN2 (ENSMMMG00000004499) #14	TMEM81 (ENSMMMG00000004488) #15	RBBP5 (ENSMMMG00000004421) #16	DSTYK (ENSMMMG00000004344) #17	TMCC2 (ENSMMMG00000004302) #18	NUAK2 (ENSMMMG00000004276) #19	KLHDC8A (ENSMMMG00000004257) #20	LEMD1 (ENSMMMG00000004248) #21	CDK18 (ENSMMMG00000004179) #22	MFSD4A (ENSMMMG00000004071) #23	ELK4 (ENSMMMG00000004051) #24	SLC45A3 (ENSMMMG00000004036) #25	NUCKS1 (ENSMMMG00000004012) #26	RAB29 (ENSMMMG00000004000) #27	SLC41A1 (ENSMMMG00000003973) #28	PM20D1 (ENSMMMG00000003926) #29	SLC26A9 (ENSMMMG00000003875) #30	RAB7B (ENSMMMG00000003773) #31	CTSE (ENSMMMG00000003747) #32	RHEX (ENSMMMG00000003734) #33	AVPR1B (ENSMMMG00000003719) #34	ENSMMMG00000003704 #35	ENSMMMG00000003630 #36	IKBKE (ENSMMMG00000003569) #37
Eurasian red squirrel	MODERN SPECIES	3	PPP1R15B (ENSSVLG00005007196) #10	PIK3C2B (ENSSVLG00005007149) #11	MDM4 (ENSSVLG00005006908) #12	LRRN2 (ENSSVLG00005006839)	NFASC (ENSSVLG00005006491) #13	CNTN2 (ENSSVLG00005006288) #14	TMEM81 (ENSSVLG00005006251) #15	RBBP5 (ENSSVLG00005006207) #16	ENSSVLG00005006171	DSTYK (ENSSVLG00005006109) #17	TMCC2 (ENSSVLG00005005955) #18	NUAK2 (ENSSVLG00005005904) #19	KLHDC8A (ENSSVLG00005005877) #20	LEMD1 (ENSSVLG00005005835) #21	ENSSVLG00005005816	CDK18 (ENSSVLG00005005665) #22	MFSD4A (ENSSVLG00005005415) #23	ELK4 (ENSSVLG00005005363) #24	SLC45A3 (ENSSVLG00005024932) #25	NUCKS1 (ENSSVLG00005024900) #26	RAB29 (ENSSVLG00005024859) #27	SLC41A1 (ENSSVLG00005024830) #28	PM20D1 (ENSSVLG00005024768) #29	SLC26A9 (ENSSVLG00005024704) #30	RAB7B (ENSSVLG00005024662) #31	CTSE (ENSSVLG00005024594) #32	RHEX (ENSSVLG00005024556) #33	AVPR1B (ENSSVLG00005024532) #34	ENSSVLG00005024519	ENSSVLG00005024444 #35	ENSSVLG00005024367 #36
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Myomorpha	ANCESTRAL SPECIES	16	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Muroidea	ANCESTRAL SPECIES	9	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Cricetidae	ANCESTRAL SPECIES	13	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Chinese hamster chok1gshd	MODERN SPECIES	2	Golt1a (ENSCGRG00001012446) #8	Plekha6 (ENSCGRG00001023579) #9	Ppp1r15b (ENSCGRG00001007710) #10	Pik3c2b (ENSCGRG00001024716) #11	Mdm4 (ENSCGRG00001004339) #12	Lrrn2 (ENSCGRG00001010870)	Nfasc (ENSCGRG00001010423) #13	Cntn2 (ENSCGRG00001000875) #14	Tmem81 (ENSCGRG00001003877) #15	Rbbp5 (ENSCGRG00001015995) #16	Dstyk (ENSCGRG00001013846) #17	Tmcc2 (ENSCGRG00001018382) #18	Nuak2 (ENSCGRG00001024690) #19	Klhdc8a (ENSCGRG00001011449) #20	Lemd1 (ENSCGRG00001013207) #21	Cdk18 (ENSCGRG00001024457) #22	Mfsd4a (ENSCGRG00001019519) #23	Elk4 (ENSCGRG00001008899) #24	Slc45a3 (ENSCGRG00001012433) #25	ENSCGRG00001014111 #26	Rab29 (ENSCGRG00001017622) #27	Slc41a1 (ENSCGRG00001019040) #28	Pm20d1 (ENSCGRG00001004594) #29	Slc26a9 (ENSCGRG00001015835) #30	Rab7b (ENSCGRG00001021618) #31	Ctse (ENSCGRG00001004682) #32	Avpr1b (ENSCGRG00001020692) #34	Fam72a (ENSCGRG00001021328) #35	Srgap2 (ENSCGRG00001005806) #36	Ikbke (ENSCGRG00001016980) #37	Rassf5 (ENSCGRG00001019409)
Golden Hamster	MODERN SPECIES	880								ENSMAUG00000008201 #13	Cntn2 (ENSMAUG00000015129) #14	Rbbp5 (ENSMAUG00000015932) #16	Dstyk (ENSMAUG00000011558) #17	Tmcc2 (ENSMAUG00000013380) #18	Nuak2 (ENSMAUG00000017535) #19	Klhdc8a (ENSMAUG00000007871) #20	Lemd1 (ENSMAUG00000020450) #21	Cdk18 (ENSMAUG00000013251) #22	Mfsd4a (ENSMAUG00000007980) #23	Elk4 (ENSMAUG00000015854) #24	ENSMAUG00000014495 #25	Nucks1 (ENSMAUG00000020322) #26	Rab29 (ENSMAUG00000017388) #27	Slc41a1 (ENSMAUG00000014467) #28	ENSMAUG00000001067 #29
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Prairie vole	MODERN SPECIES	14	Golt1a (ENSMOCG00000017873) #8	Plekha6 (ENSMOCG00000019638) #9	Ppp1r15b (ENSMOCG00000021507) #10	Pik3c2b (ENSMOCG00000019428) #11	Mdm4 (ENSMOCG00000002099) #12	Lrrn2 (ENSMOCG00000014938)	Nfasc (ENSMOCG00000001737) #13	ENSMOCG00000001856	Cntn2 (ENSMOCG00000020328) #14	Rbbp5 (ENSMOCG00000014868) #16	Dstyk (ENSMOCG00000018297) #17	Tmcc2 (ENSMOCG00000014046) #18	Nuak2 (ENSMOCG00000020262) #19	Klhdc8a (ENSMOCG00000002500) #20	Lemd1 (ENSMOCG00000001367) #21	Cdk18 (ENSMOCG00000012764) #22	Mfsd4a (ENSMOCG00000002624) #23	Elk4 (ENSMOCG00000016511) #24	ENSMOCG00000000796 #25	Nucks1 (ENSMOCG00000016010) #26	Rab29 (ENSMOCG00000020169) #27	Slc41a1 (ENSMOCG00000015231) #28	Pm20d1 (ENSMOCG00000012510) #29	Slc26a9 (ENSMOCG00000018169) #30	Ctse (ENSMOCG00000006549) #32	Avpr1b (ENSMOCG00000002679) #34	Fam72a (ENSMOCG00000021923) #35	Srgap2 (ENSMOCG00000011026) #36	Ikbke (ENSMOCG00000002899) #37	Rassf5 (ENSMOCG00000008332)	Eif2d (ENSMOCG00000015872)
Northern American deer mouse	MODERN SPECIES	2	Golt1a (ENSPEMG00000007562) #8	Plekha6 (ENSPEMG00000000750) #9	Ppp1r15b (ENSPEMG00000010981) #10	Pik3c2b (ENSPEMG00000007478) #11	Mdm4 (ENSPEMG00000018483) #12	Lrrn2 (ENSPEMG00000010135)	Nfasc (ENSPEMG00000001323) #13	Cntn2 (ENSPEMG00000020849) #14	Tmem81 (ENSPEMG00000029756) #15	Rbbp5 (ENSPEMG00000000033) #16	Dstyk (ENSPEMG00000022259) #17	Tmcc2 (ENSPEMG00000017022) #18	Nuak2 (ENSPEMG00000021423) #19	Klhdc8a (ENSPEMG00000030196) #20	ENSPEMG00000001893	Cdk18 (ENSPEMG00000007346) #22	Mfsd4a (ENSPEMG00000017073) #23	Elk4 (ENSPEMG00000020762) #24	Slc45a3 (ENSPEMG00000022886) #25	Nucks1 (ENSPEMG00000023850) #26	Rab29 (ENSPEMG00000031264) #27	Slc41a1 (ENSPEMG00000030722) #28	Pm20d1 (ENSPEMG00000020741) #29	Slc26a9 (ENSPEMG00000020888) #30	Rab7b (ENSPEMG00000022869) #31	Ctse (ENSPEMG00000021253) #32	Avpr1b (ENSPEMG00000023110) #34	Fam72a (ENSPEMG00000018481) #35	Srgap2 (ENSPEMG00000014419) #36	Ikbke (ENSPEMG00000001718) #37	Rassf5 (ENSPEMG00000014551)
Murinae	ANCESTRAL SPECIES	11	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Mus	ANCESTRAL SPECIES	5	ENSGT00390000014507.b.a.a #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00860000136208	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a.qb #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00860000136208	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a.qb #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00860000136208	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Steppe mouse	MODERN SPECIES	226	Plekha6 (ENSMSIG00000022432) #9	Ppp1r15b (ENSMSIG00000022727) #10	Pik3c2b (ENSMSIG00000022736) #11	Mdm4 (ENSMSIG00000022799) #12	Lrrn2 (ENSMSIG00000022899)	Nfasc (ENSMSIG00000022913) #13	Cntn2 (ENSMSIG00000023282) #14	Tmem81 (ENSMSIG00000023304) #15	ENSMSIG00000023311	Rbbp5 (ENSMSIG00000023316) #16	Dstyk (ENSMSIG00000023415) #17	Tmcc2 (ENSMSIG00000023478) #18	Nuak2 (ENSMSIG00000023512) #19	Klhdc8a (ENSMSIG00000023550) #20	Lemd1 (ENSMSIG00000023579) #21	Cdk18 (ENSMSIG00000023626) #22	Mfsd4a (ENSMSIG00000023701) #23	Elk4 (ENSMSIG00000024131) #24	Slc45a3 (ENSMSIG00000024139) #25	Nucks1 (ENSMSIG00000024170) #26	Rab29 (ENSMSIG00000024195) #27	Slc41a1 (ENSMSIG00000024239) #28	Pm20d1 (ENSMSIG00000024275) #29	Slc26a9 (ENSMSIG00000024339) #30	Rab7b (ENSMSIG00000024381) #31	Ctse (ENSMSIG00000024459) #32	ENSMSIG00000024497	Avpr1b (ENSMSIG00000024504) #34	Fam72a (ENSMSIG00000024508) #35	Srgap2 (ENSMSIG00000024516) #36	Ikbke (ENSMSIG00000024599) #37
spretus	MODERN SPECIES		Plekha6 (MGP_SPRETEiJ_G0015403) #9	Ppp1r15b (MGP_SPRETEiJ_G0015402) #10	Pik3c2b (MGP_SPRETEiJ_G0015401) #11	Mdm4 (MGP_SPRETEiJ_G0015400) #12	Lrrn2 (MGP_SPRETEiJ_G0015399)	Nfasc (MGP_SPRETEiJ_G0015398) #13	Cntn2 (MGP_SPRETEiJ_G0015397) #14	Tmem81 (MGP_SPRETEiJ_G0015396) #15	Rbbp5 (MGP_SPRETEiJ_G0015395) #16	Dstyk (MGP_SPRETEiJ_G0015394) #17	Tmcc2 (MGP_SPRETEiJ_G0015393) #18	Nuak2 (MGP_SPRETEiJ_G0015392) #19	Klhdc8a (MGP_SPRETEiJ_G0015391) #20	MGP_SPRETEiJ_G0015390	Lemd1 (MGP_SPRETEiJ_G0015389) #21	Cdk18 (MGP_SPRETEiJ_G0015388) #22	Mfsd4a (MGP_SPRETEiJ_G0015387) #23	Elk4 (MGP_SPRETEiJ_G0015386) #24	Slc45a3 (MGP_SPRETEiJ_G0015385) #25	Nucks1 (MGP_SPRETEiJ_G0015384) #26	Rab29 (MGP_SPRETEiJ_G0015383) #27	Slc41a1 (MGP_SPRETEiJ_G0015382) #28	Pm20d1 (MGP_SPRETEiJ_G0015381) #29	Slc26a9 (MGP_SPRETEiJ_G0015380) #30	Rab7b (MGP_SPRETEiJ_G0015379) #31	Ctse (MGP_SPRETEiJ_G0015378) #32	Avpr1b (MGP_SPRETEiJ_G0015377) #34	Fam72a (MGP_SPRETEiJ_G0015376) #35	MGP_SPRETEiJ_G0015375 #36	Ikbke (MGP_SPRETEiJ_G0015374) #37	Rassf5 (MGP_SPRETEiJ_G0015373)
Mouse	MODERN SPECIES		Plekha6 (ENSMUSG00000041757) #9	Ppp1r15b (ENSMUSG00000046062) #10	Pik3c2b (ENSMUSG00000026447) #11	Mdm4 (ENSMUSG00000054387) #12	Lrrn2 (ENSMUSG00000026443)	Nfasc (ENSMUSG00000026442) #13	Cntn2 (ENSMUSG00000053024) #14	Tmem81 (ENSMUSG00000048174) #15	Rbbp5 (ENSMUSG00000026439) #16	Dstyk (ENSMUSG00000042046) #17	Tmcc2 (ENSMUSG00000042066) #18	Nuak2 (ENSMUSG00000009772) #19	Klhdc8a (ENSMUSG00000042115) #20	Gm29695 (ENSMUSG00000118219)	Lemd1 (ENSMUSG00000079330) #21	Cdk18 (ENSMUSG00000026437) #22	Mfsd4a (ENSMUSG00000059149) #23	Elk4 (ENSMUSG00000026436) #24	Slc45a3 (ENSMUSG00000026435) #25	Nucks1 (ENSMUSG00000026434) #26	Rab29 (ENSMUSG00000026433) #27	Slc41a1 (ENSMUSG00000013275) #28	Pm20d1 (ENSMUSG00000042251) #29	Slc26a9 (ENSMUSG00000042268) #30	Rab7b (ENSMUSG00000052688) #31	Ctse (ENSMUSG00000004552) #32	Avpr1b (ENSMUSG00000026432) #34	Fam72a (ENSMUSG00000055184) #35	Srgap2 (ENSMUSG00000026425) #36	Ikbke (ENSMUSG00000042349) #37	Rassf5 (ENSMUSG00000026430)
Ryukyu mouse	MODERN SPECIES		Plekha6 (MGP_CAROLIEiJ_G0014596) #9	Ppp1r15b (MGP_CAROLIEiJ_G0014595) #10	Pik3c2b (MGP_CAROLIEiJ_G0014594) #11	Mdm4 (MGP_CAROLIEiJ_G0014593) #12	Lrrn2 (MGP_CAROLIEiJ_G0014592)	Nfasc (MGP_CAROLIEiJ_G0014591) #13	Cntn2 (MGP_CAROLIEiJ_G0014590) #14	Tmem81 (MGP_CAROLIEiJ_G0014589) #15	Rbbp5 (MGP_CAROLIEiJ_G0014588) #16	Dstyk (MGP_CAROLIEiJ_G0014587) #17	Tmcc2 (MGP_CAROLIEiJ_G0014586) #18	Nuak2 (MGP_CAROLIEiJ_G0014585) #19	Klhdc8a (MGP_CAROLIEiJ_G0014584) #20	MGP_CAROLIEiJ_G0014583	Lemd1 (MGP_CAROLIEiJ_G0014582) #21	Cdk18 (MGP_CAROLIEiJ_G0014581) #22	Mfsd4a (MGP_CAROLIEiJ_G0014580) #23	Elk4 (MGP_CAROLIEiJ_G0014579) #24	Slc45a3 (MGP_CAROLIEiJ_G0014578) #25	Nucks1 (MGP_CAROLIEiJ_G0014577) #26	Slc26a9 (MGP_CAROLIEiJ_G0014576) #30	Rab7b (MGP_CAROLIEiJ_G0014575) #31	Ctse (MGP_CAROLIEiJ_G0014574) #32	Avpr1b (MGP_CAROLIEiJ_G0014573) #34	Fam72a (MGP_CAROLIEiJ_G0014572) #35	MGP_CAROLIEiJ_G0014571 #36	Ikbke (MGP_CAROLIEiJ_G0014570) #37	Rassf5 (MGP_CAROLIEiJ_G0014569)	Eif2d (MGP_CAROLIEiJ_G0014568)	MGP_CAROLIEiJ_G0014567	Mapkapk2 (MGP_CAROLIEiJ_G0014566)
Shrew mouse	MODERN SPECIES	18	MGP_PahariEiJ_G0027833 #7	Plekha6 (MGP_PahariEiJ_G0027832) #9	Ppp1r15b (MGP_PahariEiJ_G0027831) #10	Pik3c2b (MGP_PahariEiJ_G0027830) #11	Mdm4 (MGP_PahariEiJ_G0027829) #12	Lrrn2 (MGP_PahariEiJ_G0027828)	Nfasc (MGP_PahariEiJ_G0027827) #13	Cntn2 (MGP_PahariEiJ_G0027826) #14	Tmem81 (MGP_PahariEiJ_G0027825) #15	Rbbp5 (MGP_PahariEiJ_G0027824) #16	Dstyk (MGP_PahariEiJ_G0027823) #17	Tmcc2 (MGP_PahariEiJ_G0027822) #18	Nuak2 (MGP_PahariEiJ_G0027821) #19	Klhdc8a (MGP_PahariEiJ_G0027820) #20	Lemd1 (MGP_PahariEiJ_G0027819) #21	Cdk18 (MGP_PahariEiJ_G0027818) #22	Mfsd4a (MGP_PahariEiJ_G0027817) #23	Elk4 (MGP_PahariEiJ_G0027816) #24	Slc45a3 (MGP_PahariEiJ_G0027815) #25	Nucks1 (MGP_PahariEiJ_G0027814) #26	Rab29 (MGP_PahariEiJ_G0027813) #27	Slc41a1 (MGP_PahariEiJ_G0027812) #28	MGP_PahariEiJ_G0027811 #29	Slc26a9 (MGP_PahariEiJ_G0027810) #30	Rab7b (MGP_PahariEiJ_G0027809) #31	Ctse (MGP_PahariEiJ_G0027808) #32	Avpr1b (MGP_PahariEiJ_G0027807) #34	Fam72a (MGP_PahariEiJ_G0027806) #35	MGP_PahariEiJ_G0027805 #36	Ikbke (MGP_PahariEiJ_G0027804) #37	Rassf5 (MGP_PahariEiJ_G0027803)
Rat	MODERN SPECIES	4	Golt1a (ENSRNOG00000002936) #8	Plekha6 (ENSRNOG00000002907) #9	Ppp1r15b (ENSRNOG00000028493) #10	Pik3c2b (ENSRNOG00000029938) #11	Mdm4 (ENSRNOG00000009696) #12	Lrrn2 (ENSRNOG00000009691)	Nfasc (ENSRNOG00000030515) #13	Cntn2 (ENSRNOG00000009033) #14	Tmem81 (ENSRNOG00000028752) #15	Rbbp5 (ENSRNOG00000021289) #16	Dstyk (ENSRNOG00000021298) #17	Tmcc2 (ENSRNOG00000000033) #18	Nuak2 (ENSRNOG00000000034) #19	Klhdc8a (ENSRNOG00000000036) #20	Lemd1 (ENSRNOG00000051244) #21	Cdk18 (ENSRNOG00000008137) #22	Mfsd4a (ENSRNOG00000024657) #23	Elk4 (ENSRNOG00000007887) #24	Slc45a3 (ENSRNOG00000007591) #25	ENSRNOG00000070926	Nucks1 (ENSRNOG00000047287) #26	Rab29 (ENSRNOG00000049641) #27	Slc41a1 (ENSRNOG00000042320) #28	Pm20d1 (ENSRNOG00000039745) #29	Slc26a9 (ENSRNOG00000029514) #30	Rab7b (ENSRNOG00000039754) #31	Ctse (ENSRNOG00000006963) #32	Avpr1b (ENSRNOG00000048522) #34	Fam72a (ENSRNOG00000042747) #35	Srgap2 (ENSRNOG00000006733) #36	Ikbke (ENSRNOG00000025100) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1835							Nfasc (ENSNGAG00000020322) #13	Cntn2 (ENSNGAG00000013795) #14	Tmem81 (ENSNGAG00000015221) #15	Rbbp5 (ENSNGAG00000004415) #16	Dstyk (ENSNGAG00000003016) #17	Tmcc2 (ENSNGAG00000016272) #18	Nuak2 (ENSNGAG00000016980) #19	Klhdc8a (ENSNGAG00000012079) #20	Lemd1 (ENSNGAG00000008898) #21	Cdk18 (ENSNGAG00000008265) #22	Mfsd4a (ENSNGAG00000018968) #23	Elk4 (ENSNGAG00000016471) #24	ENSNGAG00000000141 #25	ENSNGAG00000015945	ENSNGAG00000010016 #26	Rab29 (ENSNGAG00000015383) #27	Slc41a1 (ENSNGAG00000011919) #28	Pm20d1 (ENSNGAG00000000944) #29	Slc26a9 (ENSNGAG00000012565) #30	ENSNGAG00000019005 #31	Ctse (ENSNGAG00000017938) #32	Avpr1b (ENSNGAG00000005328) #34	Fam72a (ENSNGAG00000000297) #35	Srgap2 (ENSNGAG00000017369) #36	Ikbke (ENSNGAG00000018023) #37
Kangaroo rat	MODERN SPECIES	354	ENSDORG00000003414 #7	Golt1a (ENSDORG00000003415) #8	Plekha6 (ENSDORG00000003416) #9	Ppp1r15b (ENSDORG00000028377) #10	Pik3c2b (ENSDORG00000006835) #11	ENSDORG00000023943	Mdm4 (ENSDORG00000006873) #12	Lrrn2 (ENSDORG00000008526)	Nfasc (ENSDORG00000011731) #13	Cntn2 (ENSDORG00000014240) #14	Rbbp5 (ENSDORG00000014245) #16	Dstyk (ENSDORG00000014247) #17	Tmcc2 (ENSDORG00000014248) #18	Nuak2 (ENSDORG00000013111) #19	Klhdc8a (ENSDORG00000013119) #20	Cdk18 (ENSDORG00000014662) #22	Mfsd4a (ENSDORG00000009272) #23	Elk4 (ENSDORG00000009275) #24	Slc45a3 (ENSDORG00000009276) #25	ENSDORG00000003183 #26	Rab29 (ENSDORG00000011635) #27	Slc41a1 (ENSDORG00000015757) #28	Pm20d1 (ENSDORG00000015758) #29	Slc26a9 (ENSDORG00000015759) #30	Rab7b (ENSDORG00000023346) #31	Ctse (ENSDORG00000015761) #32	Avpr1b (ENSDORG00000013289) #34	Fam72a (ENSDORG00000012916) #35	Srgap2 (ENSDORG00000012918) #36	Ikbke (ENSDORG00000012920) #37	Rassf5 (ENSDORG00000012923)
Lagomorpha	ANCESTRAL SPECIES	15	ENSGT00390000008827 #7	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256312	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288	ENSGT00550000074865
Rabbit	MODERN SPECIES	7	PLEKHA6 (ENSOCUG00000007055) #9	PIK3C2B (ENSOCUG00000008052) #11	MDM4 (ENSOCUG00000000005) #12	LRRN2 (ENSOCUG00000010352)	NFASC (ENSOCUG00000015363) #13	CNTN2 (ENSOCUG00000015404) #14	ENSOCUG00000030182	RBBP5 (ENSOCUG00000000095) #16	DSTYK (ENSOCUG00000000097) #17	TMCC2 (ENSOCUG00000001246) #18	ENSOCUG00000002381	NUAK2 (ENSOCUG00000002318) #19	KLHDC8A (ENSOCUG00000023010) #20	LEMD1 (ENSOCUG00000009235) #21	ENSOCUG00000031274	CDK18 (ENSOCUG00000009635) #22	MFSD4A (ENSOCUG00000001241) #23	ELK4 (ENSOCUG00000014477) #24	SLC45A3 (ENSOCUG00000025013) #25	NUCKS1 (ENSOCUG00000014895) #26	RAB29 (ENSOCUG00000000426) #27	SLC41A1 (ENSOCUG00000028187) #28	PM20D1 (ENSOCUG00000000427) #29	SLC26A9 (ENSOCUG00000022624) #30	CTSE (ENSOCUG00000001856) #32	ENSOCUG00000035554	AVPR1B (ENSOCUG00000007352) #34	ENSOCUG00000022194 #35	ENSOCUG00000012175 #36	RASSF5 (ENSOCUG00000015444)	EIF2D (ENSOCUG00000015451)
Pika	MODERN SPECIES	495																CDK18 (ENSOPRG00000006312) #22	MFSD4A (ENSOPRG00000006324) #23	ELK4 (ENSOPRG00000006348) #24	SLC45A3 (ENSOPRG00000006354) #25	NUCKS1 (ENSOPRG00000006364) #26	RAB29 (ENSOPRG00000006372) #27	SLC41A1 (ENSOPRG00000006378) #28	PM20D1 (ENSOPRG00000006393) #29	SLC26A9 (ENSOPRG00000006404) #30
Tree shrew	MODERN SPECIES	4631															LEMD1 (ENSTBEG00000003922) #21	CDK18 (ENSTBEG00000003959) #22	ENSTBEG00000004046 #23
Primates	ANCESTRAL SPECIES	7	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Lemuriformes	ANCESTRAL SPECIES	26	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Mouse lemur	MODERN SPECIES	19	REN (ENSMICG00000007875)	KISS1 (ENSMICG00000046282) #7	GOLT1A (ENSMICG00000047972) #8	PLEKHA6 (ENSMICG00000016918) #9	PPP1R15B (ENSMICG00000016938) #10	PIK3C2B (ENSMICG00000016940) #11	MDM4 (ENSMICG00000017021) #12	NFASC (ENSMICG00000013137) #13	CNTN2 (ENSMICG00000013182) #14	RBBP5 (ENSMICG00000013217) #16	DSTYK (ENSMICG00000000052) #17	TMCC2 (ENSMICG00000000054) #18	NUAK2 (ENSMICG00000000056) #19	KLHDC8A (ENSMICG00000026896) #20	LEMD1 (ENSMICG00000000059) #21	CDK18 (ENSMICG00000000060) #22	MFSD4A (ENSMICG00000005127) #23	ELK4 (ENSMICG00000005139) #24	SLC45A3 (ENSMICG00000037193) #25	ENSMICG00000033221 #26	RAB29 (ENSMICG00000044525) #27	SLC41A1 (ENSMICG00000034169) #28	PM20D1 (ENSMICG00000006825) #29	SLC26A9 (ENSMICG00000006832) #30	RAB7B (ENSMICG00000037176) #31	CTSE (ENSMICG00000017383) #32	RHEX (ENSMICG00000041630) #33	AVPR1B (ENSMICG00000047529) #34	ENSMICG00000029197 #35	ENSMICG00000010869 #36	ENSMICG00000046462
Lemuriformes_a	ANCESTRAL SPECIES	12	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Coquerels sifaka	MODERN SPECIES	721	GOLT1A (ENSPCOG00000008473) #8	KISS1 (ENSPCOG00000020093) #7	PLEKHA6 (ENSPCOG00000023488) #9	PPP1R15B (ENSPCOG00000021443) #10	PIK3C2B (ENSPCOG00000022732) #11	MDM4 (ENSPCOG00000024397) #12	LRRN2 (ENSPCOG00000013479)	NFASC (ENSPCOG00000016708) #13	CNTN2 (ENSPCOG00000023113) #14	RBBP5 (ENSPCOG00000017977) #16	DSTYK (ENSPCOG00000019520) #17	TMCC2 (ENSPCOG00000000350) #18	NUAK2 (ENSPCOG00000023513) #19	KLHDC8A (ENSPCOG00000017391) #20	LEMD1 (ENSPCOG00000011864) #21	CDK18 (ENSPCOG00000015803) #22	MFSD4A (ENSPCOG00000014246) #23	ELK4 (ENSPCOG00000026705) #24	ENSPCOG00000003538	SLC45A3 (ENSPCOG00000017657) #25	NUCKS1 (ENSPCOG00000027278) #26	RAB29 (ENSPCOG00000027226) #27	SLC41A1 (ENSPCOG00000023415) #28	PM20D1 (ENSPCOG00000018075) #29	SLC26A9 (ENSPCOG00000010723) #30	RAB7B (ENSPCOG00000019442) #31	CTSE (ENSPCOG00000021293) #32	RHEX (ENSPCOG00000027529) #33	AVPR1B (ENSPCOG00000021095) #34	ENSPCOG00000022267 #35	ENSPCOG00000027721 #36
Greater bamboo lemur	MODERN SPECIES	19	GOLT1A (ENSPSMG00000004122) #8	PLEKHA6 (ENSPSMG00000004203) #9	PPP1R15B (ENSPSMG00000004234) #10	PIK3C2B (ENSPSMG00000004551) #11	MDM4 (ENSPSMG00000004817) #12	LRRN2 (ENSPSMG00000004951)	NFASC (ENSPSMG00000005406) #13	CNTN2 (ENSPSMG00000006286) #14	TMEM81 (ENSPSMG00000006444) #15	RBBP5 (ENSPSMG00000006487) #16	DSTYK (ENSPSMG00000006546) #17	TMCC2 (ENSPSMG00000006747) #18	NUAK2 (ENSPSMG00000006843) #19	KLHDC8A (ENSPSMG00000006855) #20	LEMD1 (ENSPSMG00000006873) #21	CDK18 (ENSPSMG00000006891) #22	MFSD4A (ENSPSMG00000006940) #23	ELK4 (ENSPSMG00000006947) #24	SLC45A3 (ENSPSMG00000006956) #25	NUCKS1 (ENSPSMG00000006967) #26	RAB29 (ENSPSMG00000006983) #27	SLC41A1 (ENSPSMG00000007011) #28	PM20D1 (ENSPSMG00000007034) #29	SLC26A9 (ENSPSMG00000007047) #30	RAB7B (ENSPSMG00000007069) #31	CTSE (ENSPSMG00000007081) #32	RHEX (ENSPSMG00000007098) #33	AVPR1B (ENSPSMG00000007111) #34	ENSPSMG00000007149 #35	ENSPSMG00000007533 #36	IKBKE (ENSPSMG00000007758) #37
Bushbaby	MODERN SPECIES	170	REN (ENSOGAG00000011896)	GOLT1A (ENSOGAG00000011900) #8	PLEKHA6 (ENSOGAG00000011902) #9	PPP1R15B (ENSOGAG00000011911) #10	PIK3C2B (ENSOGAG00000011912) #11	MDM4 (ENSOGAG00000011679) #12	LRRN2 (ENSOGAG00000034557)	NFASC (ENSOGAG00000007371) #13	CNTN2 (ENSOGAG00000007375) #14	TMEM81 (ENSOGAG00000030515) #15	RBBP5 (ENSOGAG00000007382) #16	DSTYK (ENSOGAG00000007385) #17	TMCC2 (ENSOGAG00000025420) #18	NUAK2 (ENSOGAG00000013071) #19	KLHDC8A (ENSOGAG00000013073) #20	CDK18 (ENSOGAG00000010454) #22	MFSD4A (ENSOGAG00000010457) #23	ELK4 (ENSOGAG00000010460) #24	SLC45A3 (ENSOGAG00000010464) #25	ENSOGAG00000010466 #26	RAB29 (ENSOGAG00000010468) #27	SLC41A1 (ENSOGAG00000010471) #28	ENSOGAG00000034866	PM20D1 (ENSOGAG00000010472) #29	ENSOGAG00000010475	SLC26A9 (ENSOGAG00000010476) #30	RAB7B (ENSOGAG00000025428) #31	CTSE (ENSOGAG00000013057) #32	RHEX (ENSOGAG00000002165) #33	AVPR1B (ENSOGAG00000033654) #34	ENSOGAG00000002164 #35
Haplorrhini	ANCESTRAL SPECIES	7	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Tarsier	MODERN SPECIES	7111													NUAK2 (ENSTSYG00000033748) #19	KLHDC8A (ENSTSYG00000013270) #20	LEMD1 (ENSTSYG00000013708) #21	CDK18 (ENSTSYG00000006079) #22	MFSD4A (ENSTSYG00000012613) #23	ELK4 (ENSTSYG00000012631) #24	SLC45A3 (ENSTSYG00000010698) #25	ENSTSYG00000026428	ENSTSYG00000028060	PLEKHG1 (ENSTSYG00000012891)
Simiiformes	ANCESTRAL SPECIES	8	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000146964	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Catarrhini	ANCESTRAL SPECIES	10	ENSGT00910000146964	ENSGT00910000147821	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00910000147544	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00390000016585	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Hominoidea	ANCESTRAL SPECIES	7	ENSGT00940000161204	ENSGT00910000146964	ENSGT00910000147821	ENSGT00940000157024 #13	ENSGT00910000147544	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00390000016585	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Hominidae	ANCESTRAL SPECIES	6	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000146964	ENSGT00910000147821	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00390000016585	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	6	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000146964	ENSGT00910000147821	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b.o #36	ENSGT00950000182937.B.a #37
Homo/Pan group	ANCESTRAL SPECIES	7	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000146964	ENSGT00910000147821	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b.o #36	ENSGT00950000182937.B.a #37
Pan	ANCESTRAL SPECIES		ENSGT00940000155722.m.a	ENSGT00940000161204	ENSGT00910000146964	ENSGT00910000147821	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00910000147862	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b.o #36	ENSGT00950000182937.B.a #37
Chimpanzee	MODERN SPECIES		MDM4 (ENSPTRG00000001889) #12	ENSPTRG00000044638	LRRN2 (ENSPTRG00000030219)	ENSPTRG00000045790	ENSPTRG00000052117	NFASC (ENSPTRG00000001891) #13	CNTN2 (ENSPTRG00000001892) #14	TMEM81 (ENSPTRG00000041103) #15	RBBP5 (ENSPTRG00000001894) #16	DSTYK (ENSPTRG00000001895) #17	TMCC2 (ENSPTRG00000001896) #18	NUAK2 (ENSPTRG00000001897) #19	KLHDC8A (ENSPTRG00000001898) #20	LEMD1 (ENSPTRG00000024090) #21	ENSPTRG00000044824	CDK18 (ENSPTRG00000044522) #22	MFSD4A (ENSPTRG00000001901) #23	ELK4 (ENSPTRG00000001902) #24	SLC45A3 (ENSPTRG00000001903) #25	NUCKS1 (ENSPTRG00000048501) #26	RAB29 (ENSPTRG00000001905) #27	SLC41A1 (ENSPTRG00000001906) #28	PM20D1 (ENSPTRG00000001907) #29	SLC26A9 (ENSPTRG00000001908) #30	RAB7B (ENSPTRG00000048926) #31	CTSE (ENSPTRG00000022821) #32	RHEX (ENSPTRG00000023332) #33	AVPR1B (ENSPTRG00000023708) #34	ENSPTRG00000023098 #35	SRGAP2 (ENSPTRG00000001909) #36	IKBKE (ENSPTRG00000001910) #37
Bonobo	MODERN SPECIES		ENSPPAG00000033858	LRRN2 (ENSPPAG00000026351)	ENSPPAG00000038947	ENSPPAG00000006204	NFASC (ENSPPAG00000028903) #13	CNTN2 (ENSPPAG00000028002) #14	TMEM81 (ENSPPAG00000024617) #15	RBBP5 (ENSPPAG00000004153) #16	DSTYK (ENSPPAG00000034004) #17	TMCC2 (ENSPPAG00000030775) #18	ENSPPAG00000029043	NUAK2 (ENSPPAG00000032571) #19	KLHDC8A (ENSPPAG00000039119) #20	LEMD1 (ENSPPAG00000034983) #21	ENSPPAG00000037447	CDK18 (ENSPPAG00000029946) #22	MFSD4A (ENSPPAG00000029538) #23	ELK4 (ENSPPAG00000029379) #24	ENSPPAG00000031244	SLC45A3 (ENSPPAG00000042471) #25	NUCKS1 (ENSPPAG00000031082) #26	ENSPPAG00000014956	RAB29 (ENSPPAG00000013675) #27	SLC41A1 (ENSPPAG00000033980) #28	PM20D1 (ENSPPAG00000042310) #29	SLC26A9 (ENSPPAG00000013194) #30	RAB7B (ENSPPAG00000037308) #31	CTSE (ENSPPAG00000037615) #32	RHEX (ENSPPAG00000025324) #33	AVPR1B (ENSPPAG00000036422) #34	ENSPPAG00000002734 #35
Human	MODERN SPECIES		PLEKHA6 (ENSG00000143850) #9	PPP1R15B (ENSG00000158615) #10	PIK3C2B (ENSG00000133056) #11	MDM4 (ENSG00000198625) #12	LRRN2 (ENSG00000170382)	NFASC (ENSG00000163531) #13	CNTN2 (ENSG00000184144) #14	TMEM81 (ENSG00000174529) #15	RBBP5 (ENSG00000117222) #16	DSTYK (ENSG00000133059) #17	TMCC2 (ENSG00000133069) #18	NUAK2 (ENSG00000163545) #19	KLHDC8A (ENSG00000162873) #20	LEMD1 (ENSG00000186007) #21	BLACAT1 (ENSG00000281406)	CDK18 (ENSG00000117266) #22	MFSD4A (ENSG00000174514) #23	ELK4 (ENSG00000158711) #24	SLC45A3 (ENSG00000158715) #25	NUCKS1 (ENSG00000069275) #26	RAB29 (ENSG00000117280) #27	SLC41A1 (ENSG00000133065) #28	PM20D1 (ENSG00000162877) #29	SLC26A9 (ENSG00000174502) #30	RAB7B (ENSG00000276600) #31	CTSE (ENSG00000196188) #32	RHEX (ENSG00000263961) #33	AVPR1B (ENSG00000198049) #34	FAM72A (ENSG00000196550) #35	SRGAP2 (ENSG00000266028) #36	IKBKE (ENSG00000263528) #37
Gorilla	MODERN SPECIES		ENSGGOG00000039564	PPP1R15B (ENSGGOG00000001353) #10	PIK3C2B (ENSGGOG00000001355) #11	MDM4 (ENSGGOG00000012957) #12	LRRN2 (ENSGGOG00000006404)	NFASC (ENSGGOG00000014728) #13	CNTN2 (ENSGGOG00000014781) #14	TMEM81 (ENSGGOG00000014794) #15	RBBP5 (ENSGGOG00000014796) #16	DSTYK (ENSGGOG00000003512) #17	TMCC2 (ENSGGOG00000003520) #18	NUAK2 (ENSGGOG00000003525) #19	KLHDC8A (ENSGGOG00000003529) #20	LEMD1 (ENSGGOG00000012063) #21	ENSGGOG00000037720	CDK18 (ENSGGOG00000004471) #22	MFSD4A (ENSGGOG00000002318) #23	ELK4 (ENSGGOG00000004360) #24	ENSGGOG00000039428	SLC45A3 (ENSGGOG00000006677) #25	NUCKS1 (ENSGGOG00000039124) #26	RAB29 (ENSGGOG00000016994) #27	SLC41A1 (ENSGGOG00000012751) #28	PM20D1 (ENSGGOG00000017097) #29	SLC26A9 (ENSGGOG00000012430) #30	ENSGGOG00000028139 #35	AVPR1B (ENSGGOG00000013058) #34	RHEX (ENSGGOG00000013062) #33	CTSE (ENSGGOG00000000787) #32	RAB7B (ENSGGOG00000043729) #31	SRGAP2 (ENSGGOG00000006032) #36
Orangutan	MODERN SPECIES		GOLT1A (ENSPPYG00000000320) #8	PLEKHA6 (ENSPPYG00000000319) #9	PPP1R15B (ENSPPYG00000000316) #11	MDM4 (ENSPPYG00000000315) #12	LRRN2 (ENSPPYG00000000314)	NFASC (ENSPPYG00000000313) #13	CNTN2 (ENSPPYG00000000312) #14	TMEM81 (ENSPPYG00000000311) #15	RBBP5 (ENSPPYG00000000310) #16	DSTYK (ENSPPYG00000000309) #17	TMCC2 (ENSPPYG00000041531) #18	NUAK2 (ENSPPYG00000000307) #19	KLHDC8A (ENSPPYG00000041159) #20	LEMD1 (ENSPPYG00000000305) #21	ENSPPYG00000038315	CDK18 (ENSPPYG00000000304) #22	MFSD4A (ENSPPYG00000000303) #23	ELK4 (ENSPPYG00000000302) #24	SLC45A3 (ENSPPYG00000000301) #25	ENSPPYG00000000300	NUCKS1 (ENSPPYG00000039356) #26	RAB29 (ENSPPYG00000000298) #27	SLC41A1 (ENSPPYG00000000297) #28	PM20D1 (ENSPPYG00000000296) #29	SLC26A9 (ENSPPYG00000000295) #30	RAB7B (ENSPPYG00000032937) #31	CTSE (ENSPPYG00000000294) #32	RHEX (ENSPPYG00000000293) #33	AVPR1B (ENSPPYG00000000292) #34	ENSPPYG00000000291 #35	SRGAP2 (ENSPPYG00000000289) #36
Gibbon	MODERN SPECIES	20	LRRN2 (ENSNLEG00000014305)	ENSNLEG00000029442	ENSNLEG00000028638	ENSNLEG00000031607	NFASC (ENSNLEG00000014308) #13	CNTN2 (ENSNLEG00000014386) #14	TMEM81 (ENSNLEG00000018297) #15	RBBP5 (ENSNLEG00000014409) #16	DSTYK (ENSNLEG00000014438) #17	ENSNLEG00000029837	TMCC2 (ENSNLEG00000014451) #18	NUAK2 (ENSNLEG00000014473) #19	KLHDC8A (ENSNLEG00000014485) #20	LEMD1 (ENSNLEG00000014492) #21	ENSNLEG00000036231	CDK18 (ENSNLEG00000014510) #22	MFSD4A (ENSNLEG00000014533) #23	ELK4 (ENSNLEG00000014548) #24	ENSNLEG00000027621	SLC45A3 (ENSNLEG00000014553) #25	ENSNLEG00000031010	NUCKS1 (ENSNLEG00000029092) #26	RAB29 (ENSNLEG00000029152) #27	SLC41A1 (ENSNLEG00000014584) #28	PM20D1 (ENSNLEG00000014587) #29	SLC26A9 (ENSNLEG00000014612) #30	CTSE (ENSNLEG00000000406) #32	RHEX (ENSNLEG00000000445) #33	AVPR1B (ENSNLEG00000000448) #34	ENSNLEG00000000454 #35	ENSNLEG00000035872
Cercopithecidae	ANCESTRAL SPECIES	20	ENSGT00940000161204	ENSGT00910000146964	ENSGT00910000147821	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00910000147544	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00390000016585	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Cercopithecinae	ANCESTRAL SPECIES	18	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000146964	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00390000016585	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT00950000182802.B.a.a.a.a.h.a.b.a.a.b	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35
Vervet Monkey	MODERN SPECIES	17	PLEKHA6 (ENSCSAG00000014522) #9	ENSCSAG00000014530	PPP1R15B (ENSCSAG00000000257) #10	PIK3C2B (ENSCSAG00000014548) #11	MDM4 (ENSCSAG00000014561) #12	LRRN2 (ENSCSAG00000000258)	NFASC (ENSCSAG00000014579) #13	CNTN2 (ENSCSAG00000014592) #14	TMEM81 (ENSCSAG00000000259) #15	RBBP5 (ENSCSAG00000014601) #16	DSTYK (ENSCSAG00000014610) #17	TMCC2 (ENSCSAG00000014615) #18	NUAK2 (ENSCSAG00000014618) #19	KLHDC8A (ENSCSAG00000014624) #20	LEMD1 (ENSCSAG00000014629) #21	CDK18 (ENSCSAG00000014635) #22	MFSD4A (ENSCSAG00000014641) #23	ELK4 (ENSCSAG00000014647) #24	SLC45A3 (ENSCSAG00000014650) #25	NUCKS1 (ENSCSAG00000014676) #26	RAB29 (ENSCSAG00000014712) #27	SLC41A1 (ENSCSAG00000014727) #28	PM20D1 (ENSCSAG00000014747) #29	ENSCSAG00000000260	SLC26A9 (ENSCSAG00000014826) #30	RAB7B (ENSCSAG00000014861) #31	CTSE (ENSCSAG00000014873) #32	RHEX (ENSCSAG00000014880) #33	AVPR1B (ENSCSAG00000014889) #34	ENSCSAG00000014894 #35	ENSCSAG00000014903 #36
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000146964	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00390000016585	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT00950000182802.B.a.a.a.a.h.a.b.a.a.b	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35
Macaca	ANCESTRAL SPECIES		ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000146964	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00390000016585	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT00950000182802.B.a.a.a.a.h.a.b.a.a.b	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35
Pig-tailed macaque	MODERN SPECIES	113	MDM4 (ENSMNEG00000026547) #12	LRRN2 (ENSMNEG00000001373)	ENSMNEG00000025350	ENSMNEG00000026650	NFASC (ENSMNEG00000029843) #13	CNTN2 (ENSMNEG00000036372) #14	TMEM81 (ENSMNEG00000006215) #15	RBBP5 (ENSMNEG00000044153) #16	DSTYK (ENSMNEG00000042275) #17	ENSMNEG00000042574	TMCC2 (ENSMNEG00000042820) #18	ENSMNEG00000042851	NUAK2 (ENSMNEG00000035837) #19	KLHDC8A (ENSMNEG00000039146) #20	LEMD1 (ENSMNEG00000034289) #21	CDK18 (ENSMNEG00000038415) #22	MFSD4A (ENSMNEG00000033289) #23	ELK4 (ENSMNEG00000042864) #24	ENSMNEG00000031884	SLC45A3 (ENSMNEG00000028524) #25	ENSMNEG00000042572	NUCKS1 (ENSMNEG00000012609) #26	RAB29 (ENSMNEG00000045485) #27	SLC41A1 (ENSMNEG00000043189) #28	PM20D1 (ENSMNEG00000031447) #29	ENSMNEG00000025505	SLC26A9 (ENSMNEG00000043757) #30	RAB7B (ENSMNEG00000028535) #31	CTSE (ENSMNEG00000034509) #32	RHEX (ENSMNEG00000031220) #33	AVPR1B (ENSMNEG00000042568) #34
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000161627.b.a.a.b.a.a.a	ENSGT00940000161627.a.a.a.b.b.b.b.a.a.a.a.a.a.b.a.a.a.b.b	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Crab-eating macaque	MODERN SPECIES		KISS1 (ENSMFAG00000046289) #7	PLEKHA6 (ENSMFAG00000042643) #9	PPP1R15B (ENSMFAG00000039142) #10	PIK3C2B (ENSMFAG00000003126) #11	MDM4 (ENSMFAG00000033606) #12	LRRN2 (ENSMFAG00000010454)	ENSMFAG00000007354	NFASC (ENSMFAG00000033112) #13	CNTN2 (ENSMFAG00000038396) #14	RBBP5 (ENSMFAG00000038790) #16	DSTYK (ENSMFAG00000040203) #17	TMCC2 (ENSMFAG00000038713) #18	NUAK2 (ENSMFAG00000038432) #19	KLHDC8A (ENSMFAG00000037118) #20	LEMD1 (ENSMFAG00000036675) #21	CDK18 (ENSMFAG00000003017) #22	MFSD4A (ENSMFAG00000039412) #23	ELK4 (ENSMFAG00000033410) #24	ENSMFAG00000053342	SLC45A3 (ENSMFAG00000045958) #25	ENSMFAG00000062767	ENSMFAG00000051712	ENSMFAG00000039685 #27	SLC41A1 (ENSMFAG00000041913) #28	PM20D1 (ENSMFAG00000039759) #29	SLC26A9 (ENSMFAG00000034099) #30	RAB7B (ENSMFAG00000059436) #31	CTSE (ENSMFAG00000024648) #32	RHEX (ENSMFAG00000045307) #33	AVPR1B (ENSMFAG00000040573) #34	ENSMFAG00000043825 #35
Rhesus	MODERN SPECIES		PLEKHA6 (ENSMMUG00000017114) #9	PPP1R15B (ENSMMUG00000065076) #10	PIK3C2B (ENSMMUG00000016563) #11	MDM4 (ENSMMUG00000011236) #12	LRRN2 (ENSMMUG00000063658)	ENSMMUG00000031378	NFASC (ENSMMUG00000017508) #13	CNTN2 (ENSMMUG00000018797) #14	TMEM81 (ENSMMUG00000018802) #15	RBBP5 (ENSMMUG00000018803) #16	DSTYK (ENSMMUG00000010478) #17	TMCC2 (ENSMMUG00000010480) #18	NUAK2 (ENSMMUG00000049565) #19	KLHDC8A (ENSMMUG00000018585) #20	LEMD1 (ENSMMUG00000004100) #21	CDK18 (ENSMMUG00000004109) #22	MFSD4A (ENSMMUG00000004113) #23	ELK4 (ENSMMUG00000001024) #24	SLC45A3 (ENSMMUG00000004116) #25	ENSMMUG00000064105	ENSMMUG00000064439	NUCKS1 (ENSMMUG00000055835) #26	SLC41A1 (ENSMMUG00000021426) #28	PM20D1 (ENSMMUG00000003673) #29	SLC26A9 (ENSMMUG00000014694) #30	RAB7B (ENSMMUG00000061872) #31	CTSE (ENSMMUG00000021591) #32	RHEX (ENSMMUG00000002254) #33	AVPR1B (ENSMMUG00000054385) #34	ENSMMUG00000004318 #35	SRGAP2 (ENSMMUG00000022614) #36
Cercopithecinae_b	ANCESTRAL SPECIES	3	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000146964	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00390000016585	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT00950000182802.B.a.a.a.a.h.a.b.a.a.b	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35
Olive baboon	MODERN SPECIES		PLEKHA6 (ENSPANG00000011480) #9	PPP1R15B (ENSPANG00000018737) #10	PIK3C2B (ENSPANG00000012285) #11	MDM4 (ENSPANG00000008555) #12	ENSPANG00000045390	NFASC (ENSPANG00000007499) #13	CNTN2 (ENSPANG00000019892) #14	TMEM81 (ENSPANG00000023913) #15	RBBP5 (ENSPANG00000015342) #16	DSTYK (ENSPANG00000014634) #17	TMCC2 (ENSPANG00000007127) #18	NUAK2 (ENSPANG00000018147) #19	KLHDC8A (ENSPANG00000010607) #20	LEMD1 (ENSPANG00000003302) #21	ENSPANG00000043758	CDK18 (ENSPANG00000015343) #22	MFSD4A (ENSPANG00000011607) #23	ELK4 (ENSPANG00000023518) #24	ENSPANG00000035167	SLC45A3 (ENSPANG00000010608) #25	NUCKS1 (ENSPANG00000018969) #26	RAB29 (ENSPANG00000009660) #27	SLC41A1 (ENSPANG00000012286) #28	PM20D1 (ENSPANG00000011481) #29	SLC26A9 (ENSPANG00000011608) #30	RAB7B (ENSPANG00000021349) #31	CTSE (ENSPANG00000003303) #32	RHEX (ENSPANG00000018822) #33	AVPR1B (ENSPANG00000022549) #34	ENSPANG00000033432 #35	ENSPANG00000018738 #36
Cercopithecinae_d	ANCESTRAL SPECIES	46	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000146964	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00390000016585	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT00950000182802.B.a.a.a.a.h.a.b.a.a.b	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35
Sooty mangabey	MODERN SPECIES	106	PIK3C2B (ENSCATG00000035680) #11	MDM4 (ENSCATG00000027086) #12	LRRN2 (ENSCATG00000013327)	ENSCATG00000016174	ENSCATG00000014948	NFASC (ENSCATG00000044613) #13	CNTN2 (ENSCATG00000029452) #14	TMEM81 (ENSCATG00000017968) #15	DSTYK (ENSCATG00000037937) #17	ENSCATG00000029333	TMCC2 (ENSCATG00000039289) #18	ENSCATG00000023486	NUAK2 (ENSCATG00000044068) #19	KLHDC8A (ENSCATG00000012552) #20	LEMD1 (ENSCATG00000042550) #21	CDK18 (ENSCATG00000032904) #22	MFSD4A (ENSCATG00000034333) #23	ELK4 (ENSCATG00000040719) #24	ENSCATG00000043622	SLC45A3 (ENSCATG00000042540) #25	ENSCATG00000043300	NUCKS1 (ENSCATG00000044382) #26	RAB29 (ENSCATG00000036196) #27	SLC41A1 (ENSCATG00000045118) #28	PM20D1 (ENSCATG00000042937) #29	SLC26A9 (ENSCATG00000029349) #30	RAB7B (ENSCATG00000031372) #31	CTSE (ENSCATG00000033978) #32	RHEX (ENSCATG00000039273) #33	AVPR1B (ENSCATG00000043158) #34	ENSCATG00000039447 #35
Drill	MODERN SPECIES	1046	PIK3C2B (ENSMLEG00000042470) #11	MDM4 (ENSMLEG00000032041) #12	LRRN2 (ENSMLEG00000004181)	ENSMLEG00000023827	ENSMLEG00000001033	NFASC (ENSMLEG00000042801) #13	CNTN2 (ENSMLEG00000030884) #14	TMEM81 (ENSMLEG00000014982) #15	RBBP5 (ENSMLEG00000013766) #16	DSTYK (ENSMLEG00000035498) #17	ENSMLEG00000029424	TMCC2 (ENSMLEG00000034505) #18	NUAK2 (ENSMLEG00000040864) #19	KLHDC8A (ENSMLEG00000023720) #20	LEMD1 (ENSMLEG00000040378) #21	CDK18 (ENSMLEG00000028392) #22	MFSD4A (ENSMLEG00000033237) #23	ELK4 (ENSMLEG00000034383) #24	ENSMLEG00000013828	SLC45A3 (ENSMLEG00000031484) #25	ENSMLEG00000036103	NUCKS1 (ENSMLEG00000029812) #26	RAB29 (ENSMLEG00000033764) #27	SLC41A1 (ENSMLEG00000017414) #28	PM20D1 (ENSMLEG00000041223) #29	ENSMLEG00000041812	SLC26A9 (ENSMLEG00000041895) #30	RAB7B (ENSMLEG00000006035) #31	CTSE (ENSMLEG00000030993) #32
Rhinopithecus	ANCESTRAL SPECIES	38	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000146964	ENSGT00910000147821	ENSGT00940000157024 #13	ENSGT00910000147544	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT00990000203720.a.a.d	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Black snub-nosed monkey	MODERN SPECIES	663	MDM4 (ENSRBIG00000038824) #12	LRRN2 (ENSRBIG00000023376)	ENSRBIG00000027754	ENSRBIG00000027751	ENSRBIG00000027748	NFASC (ENSRBIG00000040817) #13	CNTN2 (ENSRBIG00000034974) #14	TMEM81 (ENSRBIG00000020023) #15	RBBP5 (ENSRBIG00000028065) #16	DSTYK (ENSRBIG00000016550) #17	ENSRBIG00000044206	TMCC2 (ENSRBIG00000020677) #18	NUAK2 (ENSRBIG00000012566) #19	KLHDC8A (ENSRBIG00000028424) #20	LEMD1 (ENSRBIG00000040860) #21	CDK18 (ENSRBIG00000028745) #22	MFSD4A (ENSRBIG00000044581) #23	ENSRBIG00000029321	ELK4 (ENSRBIG00000029987) #24	SLC45A3 (ENSRBIG00000042078) #25	NUCKS1 (ENSRBIG00000032021) #26	RAB29 (ENSRBIG00000037021) #27	SLC41A1 (ENSRBIG00000034864) #28	PM20D1 (ENSRBIG00000038492) #29	ENSRBIG00000025017	SLC26A9 (ENSRBIG00000025899) #30	RAB7B (ENSRBIG00000043445) #31	CTSE (ENSRBIG00000028702) #32	RHEX (ENSRBIG00000038128) #33	AVPR1B (ENSRBIG00000033639) #34	ENSRBIG00000039657 #35
Golden snub-nosed monkey	MODERN SPECIES	1024										DSTYK (ENSRROG00000038232) #17	TMCC2 (ENSRROG00000042450) #18	ENSRROG00000030307	NUAK2 (ENSRROG00000037807) #19	KLHDC8A (ENSRROG00000040656) #20	LEMD1 (ENSRROG00000039574) #21	CDK18 (ENSRROG00000005880) #22	MFSD4A (ENSRROG00000033141) #23	ELK4 (ENSRROG00000038461) #24	ENSRROG00000033918	SLC45A3 (ENSRROG00000023815) #25	NUCKS1 (ENSRROG00000044639) #26	RAB29 (ENSRROG00000045239) #27	SLC41A1 (ENSRROG00000028512) #28	PM20D1 (ENSRROG00000034441) #29	ENSRROG00000030774	SLC26A9 (ENSRROG00000041161) #30	RAB7B (ENSRROG00000015353) #31	CTSE (ENSRROG00000044155) #32	RHEX (ENSRROG00000033672) #33	AVPR1B (ENSRROG00000038735) #34	ENSRROG00000033712 #35
Platyrrhini	ANCESTRAL SPECIES	24	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a.gb #12	ENSGT00940000161204	ENSGT00910000146964	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Mas night monkey	MODERN SPECIES	958	PPP1R15B (ENSANAG00000036947) #10	PIK3C2B (ENSANAG00000019718) #11	ENSANAG00000036891 #12	ENSANAG00000019407	ENSANAG00000026599	LRRN2 (ENSANAG00000018254)	ENSANAG00000037474	NFASC (ENSANAG00000029118) #13	CNTN2 (ENSANAG00000021524) #14	RBBP5 (ENSANAG00000037817) #16	DSTYK (ENSANAG00000026857) #17	TMCC2 (ENSANAG00000021813) #18	NUAK2 (ENSANAG00000023561) #19	KLHDC8A (ENSANAG00000020760) #20	LEMD1 (ENSANAG00000021706) #21	CDK18 (ENSANAG00000025867) #22	MFSD4A (ENSANAG00000037917) #23	ELK4 (ENSANAG00000026433) #24	SLC45A3 (ENSANAG00000024162) #25	NUCKS1 (ENSANAG00000026439) #26	ENSANAG00000022903 #27	SLC41A1 (ENSANAG00000037862) #28	PM20D1 (ENSANAG00000037743) #29	SLC26A9 (ENSANAG00000021642) #30	RAB7B (ENSANAG00000020770) #31	CTSE (ENSANAG00000020465) #32	RHEX (ENSANAG00000025723) #33	AVPR1B (ENSANAG00000025726) #34	ENSANAG00000022131	ENSANAG00000025942 #35	ENSANAG00000028268 #36
Cebidae	ANCESTRAL SPECIES	23	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a.gb #12	ENSGT00940000161204	ENSGT00910000146964	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Marmoset	MODERN SPECIES	10	GOLT1A (ENSCJAG00000016909) #8	PLEKHA6 (ENSCJAG00000016921) #9	PIK3C2B (ENSCJAG00000016736) #11	MDM4 (ENSCJAG00000016986) #12	LRRN2 (ENSCJAG00000017024)	ENSCJAG00000078561	NFASC (ENSCJAG00000017046) #13	CNTN2 (ENSCJAG00000017136) #14	RBBP5 (ENSCJAG00000017172) #16	DSTYK (ENSCJAG00000017201) #17	TMCC2 (ENSCJAG00000017230) #18	NUAK2 (ENSCJAG00000040262) #19	KLHDC8A (ENSCJAG00000045079) #20	LEMD1 (ENSCJAG00000039735) #21	ENSCJAG00000058800	CDK18 (ENSCJAG00000010878) #22	MFSD4A (ENSCJAG00000010903) #23	SLC45A3 (ENSCJAG00000039853) #25	ENSCJAG00000062890	NUCKS1 (ENSCJAG00000087201) #26	RAB29 (ENSCJAG00000080938) #27	SLC41A1 (ENSCJAG00000011015) #28	SLC26A9 (ENSCJAG00000011074) #30	RAB7B (ENSCJAG00000044743) #31	CTSE (ENSCJAG00000018771) #32	ENSCJAG00000059286	RHEX (ENSCJAG00000018766) #33	ENSCJAG00000038900 #35	AVPR1B (ENSCJAG00000047274) #34	ENSCJAG00000018702 #36	IKBKE (ENSCJAG00000018679) #37
Cebidae_a	ANCESTRAL SPECIES	11	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a.gb #12	ENSGT00940000155722.m.b	ENSGT00940000161204	ENSGT00910000146964	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Bolivian squirrel monkey	MODERN SPECIES	141	PPP1R15B (ENSSBOG00000000558) #10	PIK3C2B (ENSSBOG00000032481) #11	ENSSBOG00000036183 #12	ENSSBOG00000026328	LRRN2 (ENSSBOG00000018802)	ENSSBOG00000026381	ENSSBOG00000024814	NFASC (ENSSBOG00000022869) #13	CNTN2 (ENSSBOG00000013269) #14	RBBP5 (ENSSBOG00000020524) #16	DSTYK (ENSSBOG00000031749) #17	TMCC2 (ENSSBOG00000032783) #18	NUAK2 (ENSSBOG00000020563) #19	KLHDC8A (ENSSBOG00000036139) #20	LEMD1 (ENSSBOG00000018887) #21	CDK18 (ENSSBOG00000020560) #22	MFSD4A (ENSSBOG00000004711) #23	ELK4 (ENSSBOG00000022189) #24	SLC45A3 (ENSSBOG00000026106) #25	NUCKS1 (ENSSBOG00000030927) #26	RAB29 (ENSSBOG00000033566) #27	SLC41A1 (ENSSBOG00000019781) #28	PM20D1 (ENSSBOG00000024130) #29	SLC26A9 (ENSSBOG00000029552) #30	RAB7B (ENSSBOG00000016677) #31	CTSE (ENSSBOG00000033484) #32	RHEX (ENSSBOG00000031340) #33
Capuchin	MODERN SPECIES	38	ENSCCAG00000020348	PPP1R15B (ENSCCAG00000023930) #10	PIK3C2B (ENSCCAG00000025647) #11	ENSCCAG00000031000 #12	ENSCCAG00000036368	LRRN2 (ENSCCAG00000011141)	ENSCCAG00000031530	NFASC (ENSCCAG00000030860) #13	CNTN2 (ENSCCAG00000034308) #14	RBBP5 (ENSCCAG00000020690) #16	DSTYK (ENSCCAG00000029780) #17	TMCC2 (ENSCCAG00000021393) #18	NUAK2 (ENSCCAG00000019631) #19	KLHDC8A (ENSCCAG00000033611) #20	LEMD1 (ENSCCAG00000026956) #21	CDK18 (ENSCCAG00000021293) #22	MFSD4A (ENSCCAG00000023797) #23	ELK4 (ENSCCAG00000028921) #24	SLC45A3 (ENSCCAG00000024720) #25	NUCKS1 (ENSCCAG00000016745) #26	RAB29 (ENSCCAG00000033396) #27	SLC41A1 (ENSCCAG00000023472) #28	PM20D1 (ENSCCAG00000037147) #29	SLC26A9 (ENSCCAG00000023507) #30	RAB7B (ENSCCAG00000033593) #31	CTSE (ENSCCAG00000035934) #32	ENSCCAG00000020688	RHEX (ENSCCAG00000026804) #33	ENSCCAG00000004131	AVPR1B (ENSCCAG00000034494) #34	ENSCCAG00000007931
Laurasiatheria	ANCESTRAL SPECIES	25	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159482 #22
Hedgehog	MODERN SPECIES	1893																CDK18 (ENSEEUG00000005756) #22
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Artiodactyla	ANCESTRAL SPECIES		ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Suina	ANCESTRAL SPECIES	15	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461	ENSGT00950000182937.B.a #37
Pig	MODERN SPECIES	17	MDM4 (ENSSSCG00000015284) #12	LRRN2 (ENSSSCG00000015285)	ENSSSCG00000060160	NFASC (ENSSSCG00000022951) #13	CNTN2 (ENSSSCG00000040824) #14	TMEM81 (ENSSSCG00000051647) #15	RBBP5 (ENSSSCG00000015288) #16	DSTYK (ENSSSCG00000015286) #17	ENSSSCG00000039446	TMCC2 (ENSSSCG00000015287) #18	ENSSSCG00000047928	NUAK2 (ENSSSCG00000038471) #19	KLHDC8A (ENSSSCG00000023441) #20	LEMD1 (ENSSSCG00000015291) #21	BLACAT1 (ENSSSCG00000058896)	CDK18 (ENSSSCG00000015290) #22	MFSD4A (ENSSSCG00000021487) #23	ELK4 (ENSSSCG00000025182) #24	SLC45A3 (ENSSSCG00000026547) #25	NUCKS1 (ENSSSCG00000022398) #26	RAB29 (ENSSSCG00000026269) #27	SLC41A1 (ENSSSCG00000020783) #28	ENSSSCG00000021041 #29	SLC26A9 (ENSSSCG00000040720) #30	RAB7B (ENSSSCG00000036352) #31	RHEX (ENSSSCG00000015638) #33	AVPR1B (ENSSSCG00000015639) #34	ENSSSCG00000039370 #35	ENSSSCG00000015645 #36	ENSSSCG00000037428	IKBKE (ENSSSCG00000015644) #37
Chacoan peccary	MODERN SPECIES	93			MDM4 (ENSCWAG00000013721) #12	LRRN2 (ENSCWAG00000013666)	ENSCWAG00000013616	NFASC (ENSCWAG00000013264) #13	CNTN2 (ENSCWAG00000012545) #14	TMEM81 (ENSCWAG00000012497) #15	RBBP5 (ENSCWAG00000012451) #16	DSTYK (ENSCWAG00000012207) #17	TMCC2 (ENSCWAG00000011748) #18	NUAK2 (ENSCWAG00000011705) #19	KLHDC8A (ENSCWAG00000011625) #20	LEMD1 (ENSCWAG00000011430) #21	ENSCWAG00000011404	CDK18 (ENSCWAG00000011254) #22	MFSD4A (ENSCWAG00000011081) #23	ELK4 (ENSCWAG00000011037) #24	SLC45A3 (ENSCWAG00000010991) #25	NUCKS1 (ENSCWAG00000010959) #26	RAB29 (ENSCWAG00000010853) #27	SLC41A1 (ENSCWAG00000010807) #28	PM20D1 (ENSCWAG00000010780) #29	SLC26A9 (ENSCWAG00000010637) #30	RAB7B (ENSCWAG00000010593) #31	RHEX (ENSCWAG00000010556) #33	AVPR1B (ENSCWAG00000010530) #34	ENSCWAG00000010348 #35	ENSCWAG00000010278 #36	ENSCWAG00000010244	IKBKE (ENSCWAG00000010101) #37
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Cetacea	ANCESTRAL SPECIES		ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00940000178683	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00390000014996.r	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00940000178683	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00390000014996.r	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00390000014996.r	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT01100000266903	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Odontoceti_b	ANCESTRAL SPECIES		ENSGT01010000228940	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00390000014996.r	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Monodontidae	ANCESTRAL SPECIES		ENSGT01010000228940	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00390000014996.r	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT01100000266903	ENSGT01100000266412	ENSGT00940000159482 #22	ENSGT00950000182922.a.a.a.b.a.a.a	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Narwhal	MODERN SPECIES	304	PIK3C2B (ENSMMNG00015004268) #11	MDM4 (ENSMMNG00015004341) #12	LRRN2 (ENSMMNG00015004385)	NFASC (ENSMMNG00015004473) #13	CNTN2 (ENSMMNG00015004616) #14	TMEM81 (ENSMMNG00015004625) #15	RBBP5 (ENSMMNG00015004633) #16	ENSMMNG00015004642	DSTYK (ENSMMNG00015004648) #17	TMCC2 (ENSMMNG00015004671) #18	ENSMMNG00015004681	NUAK2 (ENSMMNG00015004685) #19	KLHDC8A (ENSMMNG00015004694) #20	LEMD1 (ENSMMNG00015004701) #21	BLACAT1 (ENSMMNG00015004705)	CDK18 (ENSMMNG00015004708) #22	ENSMMNG00015004716	MFSD4A (ENSMMNG00015004723) #23	ENSMMNG00015004733 #24	SLC45A3 (ENSMMNG00015004737) #25	NUCKS1 (ENSMMNG00015015567) #26	RAB29 (ENSMMNG00015015591) #27	SLC41A1 (ENSMMNG00015015620) #28	PM20D1 (ENSMMNG00015015644) #29	SLC26A9 (ENSMMNG00015015676) #30	RAB7B (ENSMMNG00015015817) #31	RHEX (ENSMMNG00015015885) #33	AVPR1B (ENSMMNG00015015940) #34	ENSMMNG00015015984 #35	ENSMMNG00015016123 #36	IKBKE (ENSMMNG00015016220) #37
Beluga whale	MODERN SPECIES	27	PPP1R15B (ENSDLEG00000005540) #10	PIK3C2B (ENSDLEG00000005513) #11	MDM4 (ENSDLEG00000005501) #12	LRRN2 (ENSDLEG00000005496)	NFASC (ENSDLEG00000004530) #13	CNTN2 (ENSDLEG00000004321) #14	TMEM81 (ENSDLEG00000004314) #15	RBBP5 (ENSDLEG00000004293) #16	ENSDLEG00000004274	DSTYK (ENSDLEG00000004238) #17	TMCC2 (ENSDLEG00000004231) #18	ENSDLEG00000004225	NUAK2 (ENSDLEG00000004218) #19	KLHDC8A (ENSDLEG00000004212) #20	ENSDLEG00000004206	CDK18 (ENSDLEG00000004194) #22	ENSDLEG00000004188	MFSD4A (ENSDLEG00000004175) #23	ELK4 (ENSDLEG00000004165) #24	ENSDLEG00000004160 #25	NUCKS1 (ENSDLEG00000004154) #26	RAB29 (ENSDLEG00000004148) #27	SLC41A1 (ENSDLEG00000004113) #28	PM20D1 (ENSDLEG00000004100) #29	SLC26A9 (ENSDLEG00000004075) #30	RAB7B (ENSDLEG00000004060) #31	RHEX (ENSDLEG00000006142) #33	AVPR1B (ENSDLEG00000006139) #34	FAM72A (ENSDLEG00000006138) #35	SRGAP2 (ENSDLEG00000006131) #36	IKBKE (ENSDLEG00000006109) #37
Vaquita	MODERN SPECIES		PIK3C2B (ENSPSNG00000020479) #11	MDM4 (ENSPSNG00000020270) #12	LRRN2 (ENSPSNG00000020207)	NFASC (ENSPSNG00000019884) #13	CNTN2 (ENSPSNG00000019686) #14	TMEM81 (ENSPSNG00000019660) #15	RBBP5 (ENSPSNG00000019596) #16	ENSPSNG00000019575	DSTYK (ENSPSNG00000019513) #17	TMCC2 (ENSPSNG00000019373) #18	ENSPSNG00000019336	NUAK2 (ENSPSNG00000019252) #19	KLHDC8A (ENSPSNG00000019206) #20	LEMD1 (ENSPSNG00000019134) #21	ENSPSNG00000019112	CDK18 (ENSPSNG00000018899) #22	MFSD4A (ENSPSNG00000018791) #23	ELK4 (ENSPSNG00000018744) #24	SLC45A3 (ENSPSNG00000018704) #25	NUCKS1 (ENSPSNG00000018653) #26	RAB29 (ENSPSNG00000018583) #27	SLC41A1 (ENSPSNG00000018524) #28	PM20D1 (ENSPSNG00000018460) #29	SLC26A9 (ENSPSNG00000018289) #30	RAB7B (ENSPSNG00000018225) #31	RHEX (ENSPSNG00000018121) #33	AVPR1B (ENSPSNG00000018076) #34	ENSPSNG00000017898 #35	ENSPSNG00000017761 #36	IKBKE (ENSPSNG00000017642) #37	RASSF5 (ENSPSNG00000017320)
Dolphin	MODERN SPECIES	3610																CDK18 (ENSTTRG00000003813) #22	MFSD4A (ENSTTRG00000003831) #23	ELK4 (ENSTTRG00000003839) #24
Sperm whale	MODERN SPECIES	15	LRRN2 (ENSPCTG00005017938)	ENSPCTG00005017871	NFASC (ENSPCTG00005017294) #13	CNTN2 (ENSPCTG00005017016) #14	TMEM81 (ENSPCTG00005016995) #15	RBBP5 (ENSPCTG00005016936) #16	ENSPCTG00005016914	DSTYK (ENSPCTG00005016794) #17	ENSPCTG00005016748	TMCC2 (ENSPCTG00005016558) #18	ENSPCTG00005016527	NUAK2 (ENSPCTG00005016412) #19	KLHDC8A (ENSPCTG00005016306) #20	LEMD1 (ENSPCTG00005016227) #21	ENSPCTG00005016209	CDK18 (ENSPCTG00005016133) #22	MFSD4A (ENSPCTG00005015838) #23	ELK4 (ENSPCTG00005015787) #24	SLC45A3 (ENSPCTG00005015718) #25	NUCKS1 (ENSPCTG00005015680) #26	RAB29 (ENSPCTG00005015566) #27	SLC41A1 (ENSPCTG00005015507) #28	PM20D1 (ENSPCTG00005015456) #29	SLC26A9 (ENSPCTG00005015398) #30	RAB7B (ENSPCTG00005015294) #31	RHEX (ENSPCTG00005015114) #33	AVPR1B (ENSPCTG00005015065) #34	FAM72A (ENSPCTG00005014906) #35	ENSPCTG00005014768 #36	IKBKE (ENSPCTG00005013713) #37	DYRK3 (ENSPCTG00005013595)
Blue whale	MODERN SPECIES		LRRN2 (ENSBMSG00010001044)	ENSBMSG00010001055	NFASC (ENSBMSG00010001145) #13	CNTN2 (ENSBMSG00010001601) #14	TMEM81 (ENSBMSG00010001613) #15	RBBP5 (ENSBMSG00010001623) #16	ENSBMSG00010001635	DSTYK (ENSBMSG00010001662) #17	ENSBMSG00010001703	TMCC2 (ENSBMSG00010001720) #18	ENSBMSG00010001749	NUAK2 (ENSBMSG00010001757) #19	KLHDC8A (ENSBMSG00010001774) #20	LEMD1 (ENSBMSG00010001788) #21	ENSBMSG00010001800	CDK18 (ENSBMSG00010001813) #22	MFSD4A (ENSBMSG00010001884) #23	ENSBMSG00010001912 #24	SLC45A3 (ENSBMSG00010001924) #25	NUCKS1 (ENSBMSG00010001932) #26	RAB29 (ENSBMSG00010001946) #27	SLC41A1 (ENSBMSG00010001969) #28	PM20D1 (ENSBMSG00010001989) #29	SLC26A9 (ENSBMSG00010002039) #30	RAB7B (ENSBMSG00010002151) #31	RHEX (ENSBMSG00010002184) #33	AVPR1B (ENSBMSG00010002218) #34	ENSBMSG00010002224	ENSBMSG00010002243 #35	ENSBMSG00010002282 #36	ENSBMSG00010002292 #36
Pecora	ANCESTRAL SPECIES	22	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Percora_a	ANCESTRAL SPECIES	15	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Bovidae	ANCESTRAL SPECIES	15	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256843	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Bovinae	ANCESTRAL SPECIES	12	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a.u #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256843	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Bos	ANCESTRAL SPECIES	12	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a.u #12	ENSGT00940000161204	ENSGT00940000157024.g.b #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256843	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Bos_a	ANCESTRAL SPECIES	58	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a.u #12	ENSGT00940000161204	ENSGT00940000157024.g.b #13	ENSGT00940000157024.h #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100.b #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256843	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Wild yak	MODERN SPECIES	2474											DSTYK (ENSBMUG00000024591) #17	TMCC2 (ENSBMUG00000024556) #18	NUAK2 (ENSBMUG00000024522) #19	KLHDC8A (ENSBMUG00000024513) #20	LEMD1 (ENSBMUG00000024502) #21	CDK18 (ENSBMUG00000024490) #22	MFSD4A (ENSBMUG00000024468) #23	ELK4 (ENSBMUG00000024398) #24	SLC45A3 (ENSBMUG00000024392) #25	NUCKS1 (ENSBMUG00000024384) #26
Domestic yak	MODERN SPECIES	5	MDM4 (ENSBGRG00000009887) #12	LRRN2 (ENSBGRG00000010207)	ENSBGRG00000010225	ENSBGRG00000010247	ENSBGRG00000010278 #13	ENSBGRG00000010358 #13	CNTN2 (ENSBGRG00000010415) #14	TMEM81 (ENSBGRG00000010496) #15	ENSBGRG00000010537 #16	DSTYK (ENSBGRG00000011026) #17	TMCC2 (ENSBGRG00000011445) #18	NUAK2 (ENSBGRG00000011743) #19	KLHDC8A (ENSBGRG00000011807) #20	LEMD1 (ENSBGRG00000011894) #21	ENSBGRG00000011939	CDK18 (ENSBGRG00000011978) #22	ENSBGRG00000012445	MFSD4A (ENSBGRG00000012501) #23	ELK4 (ENSBGRG00000012729) #24	SLC45A3 (ENSBGRG00000012849) #25	ENSBGRG00000012944 #27	SLC41A1 (ENSBGRG00000013307) #28	ENSBGRG00000013544	PM20D1 (ENSBGRG00000013575) #29	SLC26A9 (ENSBGRG00000013700) #30	RAB7B (ENSBGRG00000013765) #31	RHEX (ENSBGRG00000013938) #33	AVPR1B (ENSBGRG00000014163) #34	ENSBGRG00000014252 #35	ENSBGRG00000014494 #36	ENSBGRG00000014761
Bos_b	ANCESTRAL SPECIES	9	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a.u #12	ENSGT00940000161204	ENSGT00940000157024.g.b #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Cow	MODERN SPECIES	7	GOLT1A (ENSBTAG00000010177) #8	PLEKHA6 (ENSBTAG00000004641) #9	PPP1R15B (ENSBTAG00000013074) #10	PIK3C2B (ENSBTAG00000024633) #11	MDM4 (ENSBTAG00000006255) #12	LRRN2 (ENSBTAG00000009111)	NFASC (ENSBTAG00000045895) #13	CNTN2 (ENSBTAG00000014645) #14	TMEM81 (ENSBTAG00000015945) #15	RBBP5 (ENSBTAG00000015946) #16	DSTYK (ENSBTAG00000016618) #17	TMCC2 (ENSBTAG00000002361) #18	ENSBTAG00000018774 #19	KLHDC8A (ENSBTAG00000015197) #20	LEMD1 (ENSBTAG00000034632) #21	CDK18 (ENSBTAG00000012673) #22	MFSD4A (ENSBTAG00000004952) #23	ELK4 (ENSBTAG00000004953) #24	SLC45A3 (ENSBTAG00000007693) #25	NUCKS1 (ENSBTAG00000008001) #26	RAB29 (ENSBTAG00000003232) #27	SLC41A1 (ENSBTAG00000005379) #28	PM20D1 (ENSBTAG00000008734) #29	SLC26A9 (ENSBTAG00000001382) #30	RAB7B (ENSBTAG00000012774) #31	RHEX (ENSBTAG00000008513) #33	AVPR1B (ENSBTAG00000017301) #34	ENSBTAG00000050299	FAM72A (ENSBTAG00000020227) #35	SRGAP2 (ENSBTAG00000001483) #36	IKBKE (ENSBTAG00000010408) #37
Hybrid Bos Indicus	MODERN SPECIES	7	PPP1R15B (ENSBIXG00005012957) #10	PIK3C2B (ENSBIXG00005012930) #11	ENSBIXG00005000283 #12	ENSBIXG00005012584	LRRN2 (ENSBIXG00005012570)	ENSBIXG00005012536	NFASC (ENSBIXG00005001357) #13	CNTN2 (ENSBIXG00005012349) #14	RBBP5 (ENSBIXG00005000379) #16	TMEM81 (ENSBIXG00005012289) #15	DSTYK (ENSBIXG00005001284) #17	TMCC2 (ENSBIXG00005012217) #18	NUAK2 (ENSBIXG00005012148) #19	KLHDC8A (ENSBIXG00005012119) #20	LEMD1 (ENSBIXG00005012033) #21	CDK18 (ENSBIXG00005011999) #22	MFSD4A (ENSBIXG00005000433) #23	ELK4 (ENSBIXG00005001160) #24	SLC45A3 (ENSBIXG00005011725) #25	ENSBIXG00005011686 #27	SLC41A1 (ENSBIXG00005011597) #28	PM20D1 (ENSBIXG00005011536) #29	SLC26A9 (ENSBIXG00005011485) #30	RAB7B (ENSBIXG00005001101) #31	RHEX (ENSBIXG00005011348) #33	ENSBIXG00005011239 #34	ENSBIXG00005011233	ENSBIXG00005001047 #35	ENSBIXG00005011124 #36	IKBKE (ENSBIXG00005010881) #37	RASSF5 (ENSBIXG00005010806)
American bison	MODERN SPECIES	3252	PLEKHA6 (ENSBBBG00000004202) #9	PPP1R15B (ENSBBBG00000007662) #10	PIK3C2B (ENSBBBG00000006769) #11	ENSBBBG00000016701 #12	LRRN2 (ENSBBBG00000008377)	ENSBBBG00000016546	NFASC (ENSBBBG00000016499) #13	CNTN2 (ENSBBBG00000003994) #14	TMEM81 (ENSBBBG00000016030) #15	RBBP5 (ENSBBBG00000016023) #16	DSTYK (ENSBBBG00000015985) #17	TMCC2 (ENSBBBG00000003970) #18	NUAK2 (ENSBBBG00000015919) #19	KLHDC8A (ENSBBBG00000015896) #20	LEMD1 (ENSBBBG00000015870) #21	CDK18 (ENSBBBG00000015848) #22	MFSD4A (ENSBBBG00000015805) #23	ELK4 (ENSBBBG00000000783) #24	SLC45A3 (ENSBBBG00000003926) #25	NUCKS1 (ENSBBBG00000015727) #26	RAB29 (ENSBBBG00000015710) #27	SLC41A1 (ENSBBBG00000015685) #28	PM20D1 (ENSBBBG00000007367) #29	SLC26A9 (ENSBBBG00000003907) #30	RAB7B (ENSBBBG00000003429) #31	RHEX (ENSBBBG00000003457) #33	AVPR1B (ENSBBBG00000015599) #34	ENSBBBG00000015596	ENSBBBG00000015592 #35	ENSBBBG00000007416 #36	IKBKE (ENSBBBG00000015388) #37
Caprinae	ANCESTRAL SPECIES	12	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01070000256843	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Rambouillet Sheep	MODERN SPECIES	3	GOLT1A (ENSOARG00020004348) #8	PLEKHA6 (ENSOARG00020004415) #9	PIK3C2B (ENSOARG00020004853) #11	MDM4 (ENSOARG00020004974) #12	LRRN2 (ENSOARG00020005532)	NFASC (ENSOARG00020005607) #13	CNTN2 (ENSOARG00020006766) #14	TMEM81 (ENSOARG00020006975) #15	RBBP5 (ENSOARG00020007006) #16	DSTYK (ENSOARG00020007103) #17	TMCC2 (ENSOARG00020007562) #18	ENSOARG00020007843	KLHDC8A (ENSOARG00020007873) #20	LEMD1 (ENSOARG00020007946) #21	ENSOARG00020007991	CDK18 (ENSOARG00020008010) #22	MFSD4A (ENSOARG00020008124) #23	ELK4 (ENSOARG00020008374) #24	SLC45A3 (ENSOARG00020008423) #25	NUCKS1 (ENSOARG00020008451) #26	RAB29 (ENSOARG00020008529) #27	SLC41A1 (ENSOARG00020008653) #28	PM20D1 (ENSOARG00020008698) #29	SLC26A9 (ENSOARG00020008780) #30	RAB7B (ENSOARG00020008913) #31	RHEX (ENSOARG00020008999) #33	AVPR1B (ENSOARG00020009074) #34	FAM72A (ENSOARG00020009126) #35	ENSOARG00020009390 #36	IKBKE (ENSOARG00020009760) #37	RASSF5 (ENSOARG00020009941)
Goat	MODERN SPECIES	7	PLEKHA6 (ENSCHIG00000021840) #9	PPP1R15B (ENSCHIG00000013049) #10	PIK3C2B (ENSCHIG00000021981) #11	MDM4 (ENSCHIG00000010343) #12	LRRN2 (ENSCHIG00000008109)	NFASC (ENSCHIG00000011664) #13	CNTN2 (ENSCHIG00000017645) #14	TMEM81 (ENSCHIG00000024965) #15	RBBP5 (ENSCHIG00000014205) #16	DSTYK (ENSCHIG00000020730) #17	TMCC2 (ENSCHIG00000026456) #18	NUAK2 (ENSCHIG00000013817) #19	ENSCHIG00000000883	KLHDC8A (ENSCHIG00000003402) #20	LEMD1 (ENSCHIG00000014374) #21	CDK18 (ENSCHIG00000019952) #22	MFSD4A (ENSCHIG00000010627) #23	ELK4 (ENSCHIG00000019128) #24	SLC45A3 (ENSCHIG00000000814) #25	ENSCHIG00000015711 #26	RAB29 (ENSCHIG00000023168) #27	SLC41A1 (ENSCHIG00000014566) #28	PM20D1 (ENSCHIG00000024148) #29	SLC26A9 (ENSCHIG00000011959) #30	RAB7B (ENSCHIG00000021903) #31	RHEX (ENSCHIG00000010254) #33	AVPR1B (ENSCHIG00000016302) #34	ENSCHIG00000021764 #35	ENSCHIG00000022255 #36	IKBKE (ENSCHIG00000012098) #37	RASSF5 (ENSCHIG00000020279)
Siberian musk deer	MODERN SPECIES	123	EIF2D (ENSMMSG00000005539)	RASSF5 (ENSMMSG00000005315)	IKBKE (ENSMMSG00000005133) #37	ENSMMSG00000004858 #36	ENSMMSG00000004712 #35	LRRN2 (ENSMMSG00000004687)	NFASC (ENSMMSG00000004349) #13	CNTN2 (ENSMMSG00000004260) #14	TMEM81 (ENSMMSG00000004243) #15	RBBP5 (ENSMMSG00000004225) #16	DSTYK (ENSMMSG00000004203) #17	TMCC2 (ENSMMSG00000004158) #18	NUAK2 (ENSMMSG00000004283) #19	KLHDC8A (ENSMMSG00000004266) #20	ENSMMSG00000004255 #21	CDK18 (ENSMMSG00000004227) #22	MFSD4A (ENSMMSG00000004194) #23	ELK4 (ENSMMSG00000004189) #24	SLC45A3 (ENSMMSG00000004176) #25	ENSMMSG00000004164	NUCKS1 (ENSMMSG00000004154) #26	RAB29 (ENSMMSG00000004142) #27	SLC41A1 (ENSMMSG00000004128) #28	PM20D1 (ENSMMSG00000004114) #29	SLC26A9 (ENSMMSG00000004104) #30	RAB7B (ENSMMSG00000004086) #31	ENSMMSG00000004074	RHEX (ENSMMSG00000004058) #33	AVPR1B (ENSMMSG00000004045) #34	ENSMMSG00000004036	MDM4 (ENSMMSG00000003801) #12
Yarkand deer	MODERN SPECIES	5	PPP1R15B (ENSCHYG00000013232) #10	PIK3C2B (ENSCHYG00000013288) #11	MDM4 (ENSCHYG00000013701) #12	LRRN2 (ENSCHYG00000015210)	ENSCHYG00000015237	NFASC (ENSCHYG00000015301) #13	CNTN2 (ENSCHYG00000016016) #14	TMEM81 (ENSCHYG00000016407) #15	RBBP5 (ENSCHYG00000016445) #16	ENSCHYG00000016658	DSTYK (ENSCHYG00000016698) #17	TMCC2 (ENSCHYG00000004701) #18	NUAK2 (ENSCHYG00000004744) #19	KLHDC8A (ENSCHYG00000004757) #20	LEMD1 (ENSCHYG00000004772) #21	CDK18 (ENSCHYG00000004794) #22	MFSD4A (ENSCHYG00000004828) #23	ELK4 (ENSCHYG00000004847) #24	SLC45A3 (ENSCHYG00000004862) #25	ENSCHYG00000004874 #26	ENSCHYG00000004889	RAB29 (ENSCHYG00000004900) #27	SLC41A1 (ENSCHYG00000004924) #28	PM20D1 (ENSCHYG00000004980) #29	SLC26A9 (ENSCHYG00000005025) #30	RAB7B (ENSCHYG00000005095) #31	RHEX (ENSCHYG00000005130) #33	AVPR1B (ENSCHYG00000005177) #34	ENSCHYG00000005211 #35	ENSCHYG00000005380 #36	IKBKE (ENSCHYG00000005601) #37
Camelidae	ANCESTRAL SPECIES	52	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Arabian camel	MODERN SPECIES	15	PPP1R15B (ENSCDRG00005015580) #10	PIK3C2B (ENSCDRG00005015375) #11	MDM4 (ENSCDRG00005015050) #12	LRRN2 (ENSCDRG00005014993)	NFASC (ENSCDRG00005013477) #13	CNTN2 (ENSCDRG00005013191) #14	TMEM81 (ENSCDRG00005013171) #15	RBBP5 (ENSCDRG00005013095) #16	DSTYK (ENSCDRG00005012983) #17	TMCC2 (ENSCDRG00005012662) #18	NUAK2 (ENSCDRG00005012604) #19	KLHDC8A (ENSCDRG00005012562) #20	LEMD1 (ENSCDRG00005012426) #21	ENSCDRG00005012376	ENSCDRG00005012331	CDK18 (ENSCDRG00005012275) #22	MFSD4A (ENSCDRG00005012118) #23	ELK4 (ENSCDRG00005012052) #24	SLC45A3 (ENSCDRG00005012019) #25	ENSCDRG00005011943 #26	RAB29 (ENSCDRG00005011801) #27	SLC41A1 (ENSCDRG00005011704) #28	PM20D1 (ENSCDRG00005011511) #29	SLC26A9 (ENSCDRG00005011339) #30	RAB7B (ENSCDRG00005011197) #31	RHEX (ENSCDRG00005011067) #33	AVPR1B (ENSCDRG00005011037) #34	ENSCDRG00005010726 #35	ENSCDRG00005010493 #36	IKBKE (ENSCDRG00005010352) #37	RASSF5 (ENSCDRG00005010205)
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Carnivora	ANCESTRAL SPECIES	14	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Felidae	ANCESTRAL SPECIES	11	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00910000147108	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Panthera	ANCESTRAL SPECIES	19	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00910000147108	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00930000152807	ENSGT00950000182824.a.a.b.b #36
Tiger	MODERN SPECIES	245	GOLT1A (ENSPTIG00000017253) #8	PLEKHA6 (ENSPTIG00000017607) #9	PPP1R15B (ENSPTIG00000007079) #10	PIK3C2B (ENSPTIG00000007527) #11	MDM4 (ENSPTIG00000011372) #12	LRRN2 (ENSPTIG00000003951)	NFASC (ENSPTIG00000017903) #13	CNTN2 (ENSPTIG00000016833) #14	TMEM81 (ENSPTIG00000004466) #15	RBBP5 (ENSPTIG00000020080) #16	DSTYK (ENSPTIG00000020978) #17	TMCC2 (ENSPTIG00000021944) #18	NUAK2 (ENSPTIG00000005428) #19	KLHDC8A (ENSPTIG00000007129) #20	LEMD1 (ENSPTIG00000008269) #21	CDK18 (ENSPTIG00000011006) #22	MFSD4A (ENSPTIG00000014301) #23	ELK4 (ENSPTIG00000014801) #24	SLC45A3 (ENSPTIG00000015247) #25
Panthera_a	ANCESTRAL SPECIES	19	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00910000147108	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00930000152807	ENSGT00950000182824.a.a.b.b #36
leopard	MODERN SPECIES	4	GOLT1A (ENSPPRG00000025006) #8	PLEKHA6 (ENSPPRG00000025018) #9	PPP1R15B (ENSPPRG00000025042) #10	PIK3C2B (ENSPPRG00000025053) #11	MDM4 (ENSPPRG00000025076) #12	LRRN2 (ENSPPRG00000020672)	NFASC (ENSPPRG00000020215) #13	CNTN2 (ENSPPRG00000014931) #14	TMEM81 (ENSPPRG00000020595) #15	RBBP5 (ENSPPRG00000014730) #16	DSTYK (ENSPPRG00000014273) #17	TMCC2 (ENSPPRG00000013834) #18	NUAK2 (ENSPPRG00000013755) #19	KLHDC8A (ENSPPRG00000013688) #20	LEMD1 (ENSPPRG00000013527) #21	CDK18 (ENSPPRG00000013450) #22	MFSD4A (ENSPPRG00000013204) #23	ELK4 (ENSPPRG00000012861) #24	SLC45A3 (ENSPPRG00000012828) #25	NUCKS1 (ENSPPRG00000012811) #26	RAB29 (ENSPPRG00000012799) #27	SLC41A1 (ENSPPRG00000012711) #28	PM20D1 (ENSPPRG00000012670) #29	SLC26A9 (ENSPPRG00000012619) #30	RAB7B (ENSPPRG00000012332) #31	CTSE (ENSPPRG00000012203) #32	ENSPPRG00000012119	RHEX (ENSPPRG00000012096) #33	AVPR1B (ENSPPRG00000012027) #34	ENSPPRG00000011941 #35	ENSPPRG00000011878
lion	MODERN SPECIES	17	PIK3C2B (ENSPLOG00000021402) #11	MDM4 (ENSPLOG00000021490) #12	LRRN2 (ENSPLOG00000021562)	ENSPLOG00000021572	NFASC (ENSPLOG00000021662) #13	CNTN2 (ENSPLOG00000021922) #14	TMEM81 (ENSPLOG00000021942) #15	RBBP5 (ENSPLOG00000011999) #16	DSTYK (ENSPLOG00000012143) #17	TMCC2 (ENSPLOG00000012313) #18	ENSPLOG00000012454	NUAK2 (ENSPLOG00000012495) #19	KLHDC8A (ENSPLOG00000012543) #20	LEMD1 (ENSPLOG00000012615) #21	ENSPLOG00000012696	CDK18 (ENSPLOG00000012717) #22	MFSD4A (ENSPLOG00000012841) #23	ELK4 (ENSPLOG00000012979) #24	SLC45A3 (ENSPLOG00000013033) #25	NUCKS1 (ENSPLOG00000013086) #26	RAB29 (ENSPLOG00000013128) #27	SLC41A1 (ENSPLOG00000013213) #28	PM20D1 (ENSPLOG00000013247) #29	SLC26A9 (ENSPLOG00000013351) #30	RAB7B (ENSPLOG00000013488) #31	CTSE (ENSPLOG00000013555) #32	RHEX (ENSPLOG00000013696) #33	AVPR1B (ENSPLOG00000013802) #34	ENSPLOG00000013865 #35	ENSPLOG00000014111 #36	ENSPLOG00000014202
Cat	MODERN SPECIES	248	PPP1R15B (ENSFCAG00000004936) #10	PIK3C2B (ENSFCAG00000014850) #11	MDM4 (ENSFCAG00000014851) #12	LRRN2 (ENSFCAG00000014852)	ENSFCAG00000048866	NFASC (ENSFCAG00000027251) #13	CNTN2 (ENSFCAG00000006714) #14	TMEM81 (ENSFCAG00000006715) #15	RBBP5 (ENSFCAG00000006716) #16	DSTYK (ENSFCAG00000006717) #17	TMCC2 (ENSFCAG00000006718) #18	NUAK2 (ENSFCAG00000043568) #19	KLHDC8A (ENSFCAG00000026726) #20	LEMD1 (ENSFCAG00000026281) #21	ENSFCAG00000052631	CDK18 (ENSFCAG00000006721) #22	MFSD4A (ENSFCAG00000006722) #23	SLC45A3 (ENSFCAG00000006724) #25	NUCKS1 (ENSFCAG00000006726) #26	RAB29 (ENSFCAG00000027776) #27	SLC41A1 (ENSFCAG00000022330) #28	PM20D1 (ENSFCAG00000006729) #29	SLC26A9 (ENSFCAG00000006730) #30	RAB7B (ENSFCAG00000028707) #31	CTSE (ENSFCAG00000006731) #32	RHEX (ENSFCAG00000041315) #33	AVPR1B (ENSFCAG00000006732) #34	ENSFCAG00000035125 #35	SRGAP2 (ENSFCAG00000013777) #36	ENSFCAG00000048654	IKBKE (ENSFCAG00000013778) #37
Caniformia	ANCESTRAL SPECIES	10	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Canidae	ANCESTRAL SPECIES	36	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147821	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Canis_lupus	ANCESTRAL SPECIES	33	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147821	ENSGT00390000012979.z	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT01030000235330	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00390000008294.e.a.a.a	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35
Dog	MODERN SPECIES	31	PIK3C2B (ENSCAFG00845023047) #11	MDM4 (ENSCAFG00845023369) #12	ENSCAFG00845023653	ENSCAFG00845023669	NFASC (ENSCAFG00845023882) #13	CNTN2 (ENSCAFG00845025464) #14	TMEM81 (ENSCAFG00845025594) #15	RBBP5 (ENSCAFG00845025626) #16	DSTYK (ENSCAFG00845025761) #17	TMCC2 (ENSCAFG00845026103) #18	NUAK2 (ENSCAFG00845026271) #19	KLHDC8A (ENSCAFG00845026425) #20	LEMD1 (ENSCAFG00845026535) #21	ENSCAFG00845026658	ENSCAFG00845026682	CDK18 (ENSCAFG00845026754) #22	ENSCAFG00845027025	MFSD4A (ENSCAFG00845027063) #23	ELK4 (ENSCAFG00845027137) #24	ENSCAFG00845027204	SLC45A3 (ENSCAFG00845027228) #25	NUCKS1 (ENSCAFG00845027282) #26	RAB29 (ENSCAFG00845027374) #27	SLC41A1 (ENSCAFG00845027441) #28	PM20D1 (ENSCAFG00845027560) #29	SLC26A9 (ENSCAFG00845027703) #30	RAB7B (ENSCAFG00845027801) #31	CTSE (ENSCAFG00845027891) #32	RHEX (ENSCAFG00845027997) #33	AVPR1B (ENSCAFG00845028059) #34	FAM72A (ENSCAFG00845028118) #35
Dingo	MODERN SPECIES	275	ENSCAFG00020005988 #12	MDM4 (ENSCAFG00020005984) #12	LRRN2 (ENSCAFG00020005983)	ENSCAFG00020005980	ENSCAFG00020005976	NFASC (ENSCAFG00020005819) #13	CNTN2 (ENSCAFG00020005620) #14	TMEM81 (ENSCAFG00020005603) #15	RBBP5 (ENSCAFG00020005592) #16	DSTYK (ENSCAFG00020005351) #17	TMCC2 (ENSCAFG00020005324) #18	NUAK2 (ENSCAFG00020005323) #19	ENSCAFG00020005318 #20	ENSCAFG00020005316 #21	ENSCAFG00020005313	CDK18 (ENSCAFG00020005297) #22	ENSCAFG00020005287	MFSD4A (ENSCAFG00020005275) #23	ELK4 (ENSCAFG00020005271) #24	ENSCAFG00020005267	SLC45A3 (ENSCAFG00020005255) #25	NUCKS1 (ENSCAFG00020005249) #26	RAB29 (ENSCAFG00020005242) #27	SLC41A1 (ENSCAFG00020005235) #28	PM20D1 (ENSCAFG00020005218) #29	SLC26A9 (ENSCAFG00020005192) #30	RAB7B (ENSCAFG00020005148) #31	CTSE (ENSCAFG00020005122) #32	RHEX (ENSCAFG00020005111) #33	AVPR1B (ENSCAFG00020005106) #34	ENSCAFG00020005097 #35
Red fox	MODERN SPECIES	8	ENSVVUG00000014892	PIK3C2B (ENSVVUG00000014869) #11	MDM4 (ENSVVUG00000014855) #12	LRRN2 (ENSVVUG00000014853)	ENSVVUG00000014852	ENSVVUG00000014851	NFASC (ENSVVUG00000014840) #13	CNTN2 (ENSVVUG00000014833) #14	TMEM81 (ENSVVUG00000014832) #15	RBBP5 (ENSVVUG00000014830) #16	DSTYK (ENSVVUG00000013766) #17	TMCC2 (ENSVVUG00000013711) #18	NUAK2 (ENSVVUG00000013705) #19	KLHDC8A (ENSVVUG00000013701) #20	LEMD1 (ENSVVUG00000013700) #21	CDK18 (ENSVVUG00000013685) #22	ENSVVUG00000013677	ENSVVUG00000013663	MFSD4A (ENSVVUG00000013656) #23	ELK4 (ENSVVUG00000013648) #24	SLC45A3 (ENSVVUG00000013645) #25	NUCKS1 (ENSVVUG00000013631) #26	RAB29 (ENSVVUG00000013627) #27	SLC41A1 (ENSVVUG00000013622) #28	PM20D1 (ENSVVUG00000013600) #29	SLC26A9 (ENSVVUG00000013585) #30	RAB7B (ENSVVUG00000013579) #31	CTSE (ENSVVUG00000013575) #32	RHEX (ENSVVUG00000013572) #33	AVPR1B (ENSVVUG00000013571) #34	FAM72A (ENSVVUG00000013564) #35
Caniformia_b	ANCESTRAL SPECIES	8	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Mustelinae	ANCESTRAL SPECIES	48	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Ferret	MODERN SPECIES	215	ENSMPUG00000011694	PPP1R15B (ENSMPUG00000011698) #10	PIK3C2B (ENSMPUG00000011699) #11	MDM4 (ENSMPUG00000011721) #12	LRRN2 (ENSMPUG00000019264)	NFASC (ENSMPUG00000011730) #13	CNTN2 (ENSMPUG00000011745) #14	TMEM81 (ENSMPUG00000019268) #15	RBBP5 (ENSMPUG00000011753) #16	DSTYK (ENSMPUG00000011763) #17	TMCC2 (ENSMPUG00000011880) #18	NUAK2 (ENSMPUG00000011884) #19	KLHDC8A (ENSMPUG00000011907) #20	ENSMPUG00000011909	ENSMPUG00000011911	CDK18 (ENSMPUG00000011914) #22	MFSD4A (ENSMPUG00000011921) #23	ELK4 (ENSMPUG00000011926) #24	SLC45A3 (ENSMPUG00000011931) #25	NUCKS1 (ENSMPUG00000011958) #26	RAB29 (ENSMPUG00000011962) #27	SLC41A1 (ENSMPUG00000011967) #28	PM20D1 (ENSMPUG00000011972) #29	SLC26A9 (ENSMPUG00000011983) #30	RAB7B (ENSMPUG00000011992) #31	CTSE (ENSMPUG00000011999) #32	RHEX (ENSMPUG00000012024) #33	AVPR1B (ENSMPUG00000012030) #34	ENSMPUG00000012039 #35	ENSMPUG00000012066 #36	IKBKE (ENSMPUG00000012073) #37
American mink	MODERN SPECIES	41	PLEKHA6 (ENSNVIG00000016598) #9	PPP1R15B (ENSNVIG00000016870) #10	PIK3C2B (ENSNVIG00000016904) #11	Q6MZR7 (ENSNVIG00000017091) #12	LRRN2 (ENSNVIG00000017203)	ENSNVIG00000017216	NFASC (ENSNVIG00000017247) #13	CNTN2 (ENSNVIG00000017660) #14	TMEM81 (ENSNVIG00000017763) #15	RBBP5 (ENSNVIG00000017771) #16	DSTYK (ENSNVIG00000017836) #17	TMCC2 (ENSNVIG00000017914) #18	NUAK2 (ENSNVIG00000017953) #19	KLHDC8A (ENSNVIG00000017965) #20	LEMD1 (ENSNVIG00000018023) #21	CDK18 (ENSNVIG00000018073) #22	MFSD4A (ENSNVIG00000018117) #23	ELK4 (ENSNVIG00000018142) #24	SLC45A3 (ENSNVIG00000018152) #25	NUCKS1 (ENSNVIG00000018163) #26	RAB29 (ENSNVIG00000018172) #27	SLC41A1 (ENSNVIG00000018188) #28	P20D1 (ENSNVIG00000018195) #29	SLC26A9 (ENSNVIG00000018207) #30	RAB7B (ENSNVIG00000018238) #31	CTSE (ENSNVIG00000018263) #32	RHEX (ENSNVIG00000018280) #33	AVPR1B (ENSNVIG00000018308) #34	FA72A (ENSNVIG00000018314) #35	ENSNVIG00000018378 #36	IKBKE (ENSNVIG00000018448) #37
Ursidae	ANCESTRAL SPECIES	4	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Giant Panda	MODERN SPECIES	18	ENSAMEG00000000977 #7	GOLT1A (ENSAMEG00000027594) #8	PLEKHA6 (ENSAMEG00000000986) #9	PPP1R15B (ENSAMEG00000001046) #10	PIK3C2B (ENSAMEG00000001048) #11	MDM4 (ENSAMEG00000001126) #12	NFASC (ENSAMEG00000001153) #13	CNTN2 (ENSAMEG00000001255) #14	RBBP5 (ENSAMEG00000001335) #16	DSTYK (ENSAMEG00000001359) #17	TMCC2 (ENSAMEG00000001418) #18	ENSAMEG00000026272	NUAK2 (ENSAMEG00000023509) #19	KLHDC8A (ENSAMEG00000001452) #20	LEMD1 (ENSAMEG00000029071) #21	CDK18 (ENSAMEG00000001476) #22	MFSD4A (ENSAMEG00000001528) #23	SLC45A3 (ENSAMEG00000001555) #25	NUCKS1 (ENSAMEG00000012950) #26	RAB29 (ENSAMEG00000024396) #27	SLC41A1 (ENSAMEG00000012917) #28	PM20D1 (ENSAMEG00000012911) #29	SLC26A9 (ENSAMEG00000012777) #30	RAB7B (ENSAMEG00000026361) #31	CTSE (ENSAMEG00000012702) #32	RHEX (ENSAMEG00000012701) #33	AVPR1B (ENSAMEG00000012699) #34	ENSAMEG00000012694 #35	ENSAMEG00000011789 #36	IKBKE (ENSAMEG00000011831) #37	RASSF5 (ENSAMEG00000011872)
Ursus	ANCESTRAL SPECIES	42	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00910000147108	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b.b.a #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Polar bear	MODERN SPECIES	220		PPP1R15B (ENSUMAG00000002767) #10	PIK3C2B (ENSUMAG00000002827) #11	MDM4 (ENSUMAG00000003452) #12	LRRN2 (ENSUMAG00000003542)	ENSUMAG00000003544	NFASC (ENSUMAG00000003558) #13	CNTN2 (ENSUMAG00000003595) #14	TMEM81 (ENSUMAG00000003658) #15	RBBP5 (ENSUMAG00000003672) #16	DSTYK (ENSUMAG00000003704) #17	TMCC2 (ENSUMAG00000003823) #18	ENSUMAG00000003824	NUAK2 (ENSUMAG00000003830) #19	LEMD1 (ENSUMAG00000003837) #21	CDK18 (ENSUMAG00000003863) #22	MFSD4A (ENSUMAG00000003877) #23	ELK4 (ENSUMAG00000003883) #24	ENSUMAG00000003886 #25	NUCKS1 (ENSUMAG00000003894) #26	RAB29 (ENSUMAG00000003904) #27	SLC41A1 (ENSUMAG00000003908) #28	PM20D1 (ENSUMAG00000003915) #29	SLC26A9 (ENSUMAG00000003929) #30	RAB7B (ENSUMAG00000003956) #31	CTSE (ENSUMAG00000003964) #32	RHEX (ENSUMAG00000003974) #33	ENSUMAG00000003978 #34	ENSUMAG00000003987 #35	ENSUMAG00000003992 #36	IKBKE (ENSUMAG00000004021) #37
American black bear	DUPLICATION
American black bear	MODERN SPECIES	1494															ENSUAMG00000020462 #22	ENSUAMG00000020463 #22	MFSD4A (ENSUAMG00000020465) #23	ENSUAMG00000020466 #25
American black bear	MODERN SPECIES	1494																ENSUAMG00000020462 #22	ENSUAMG00000020463 #22	MFSD4A (ENSUAMG00000020465) #23	ENSUAMG00000020466 #25
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Chiroptera	ANCESTRAL SPECIES	22	ENSGT00390000008827 #7	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00910000147821	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Microchiroptera	ANCESTRAL SPECIES	22	ENSGT00390000008827 #7	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00910000147821	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Greater horseshoe bat	MODERN SPECIES	14	ENSRFEG00010014907 #10	PIK3C2B (ENSRFEG00010014791) #11	MDM4 (ENSRFEG00010014166) #12	ENSRFEG00010014121	NFASC (ENSRFEG00010013790) #13	CNTN2 (ENSRFEG00010013668) #14	TMEM81 (ENSRFEG00010013624) #15	RBBP5 (ENSRFEG00010013463) #16	DSTYK (ENSRFEG00010013375) #17	ENSRFEG00010013325	TMCC2 (ENSRFEG00010013072) #18	NUAK2 (ENSRFEG00010012990) #19	KLHDC8A (ENSRFEG00010012911) #20	LEMD1 (ENSRFEG00010012825) #21	ENSRFEG00010012807	CDK18 (ENSRFEG00010012742) #22	MFSD4A (ENSRFEG00010012459) #23	ELK4 (ENSRFEG00010012399) #24	SLC45A3 (ENSRFEG00010012358) #25	NUCKS1 (ENSRFEG00010012324) #26	RAB29 (ENSRFEG00010012210) #27	SLC41A1 (ENSRFEG00010012157) #28	PM20D1 (ENSRFEG00010012040) #29	SLC26A9 (ENSRFEG00010011727) #30	RAB7B (ENSRFEG00010011643) #31	CTSE (ENSRFEG00010011475) #32	RHEX (ENSRFEG00010011356) #33	AVPR1B (ENSRFEG00010011292) #34	ENSRFEG00010011098 #35	ENSRFEG00010010930 #36	IKBKE (ENSRFEG00010010766) #37
Microbat	MODERN SPECIES	1082					PPP1R15B (ENSMLUG00000027736) #10	PIK3C2B (ENSMLUG00000006948) #11	MDM4 (ENSMLUG00000007129) #12	NFASC (ENSMLUG00000007052) #13	CNTN2 (ENSMLUG00000007095) #14	TMEM81 (ENSMLUG00000007128) #15	RBBP5 (ENSMLUG00000007134) #16	DSTYK (ENSMLUG00000007156) #17	TMCC2 (ENSMLUG00000007183) #18	NUAK2 (ENSMLUG00000011425) #19	KLHDC8A (ENSMLUG00000011439) #20	CDK18 (ENSMLUG00000011470) #22	MFSD4A (ENSMLUG00000011518) #23	ELK4 (ENSMLUG00000011530) #24	SLC45A3 (ENSMLUG00000011536) #25	ENSMLUG00000011556 #26	RAB29 (ENSMLUG00000022378) #27	SLC41A1 (ENSMLUG00000004660) #28	PM20D1 (ENSMLUG00000004670) #29	ENSMLUG00000023340	SLC26A9 (ENSMLUG00000004683) #30	RAB7B (ENSMLUG00000022418) #31	CTSE (ENSMLUG00000016170) #32	RHEX (ENSMLUG00000010344) #33	AVPR1B (ENSMLUG00000010328) #34	ENSMLUG00000023937 #35	ENSMLUG00000002742 #36
Megabat	MODERN SPECIES	2744								CNTN2 (ENSPVAG00000004112) #14	TMEM81 (ENSPVAG00000004122) #15	RBBP5 (ENSPVAG00000004123) #16	DSTYK (ENSPVAG00000004125) #17	TMCC2 (ENSPVAG00000004126) #18	NUAK2 (ENSPVAG00000004127) #19	KLHDC8A (ENSPVAG00000004128) #20	LEMD1 (ENSPVAG00000004129) #21	CDK18 (ENSPVAG00000004130) #22	MFSD4A (ENSPVAG00000004131) #23	ELK4 (ENSPVAG00000004132) #24
Equus	ANCESTRAL SPECIES	33	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00910000147464	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00910000147461
Donkey	MODERN SPECIES	17	PLEKHA6 (ENSEASG00005011449) #9	PIK3C2B (ENSEASG00005011436) #11	MDM4 (ENSEASG00005011431) #12	ENSEASG00005011429	LRRN2 (ENSEASG00005011430)	NFASC (ENSEASG00005007892) #13	CNTN2 (ENSEASG00005006417) #14	TMEM81 (ENSEASG00005035722) #15	RBBP5 (ENSEASG00005006372) #16	DSTYK (ENSEASG00005005853) #17	TMCC2 (ENSEASG00005005785) #18	NUAK2 (ENSEASG00005005777) #19	KLHDC8A (ENSEASG00005005774) #20	LEMD1 (ENSEASG00005028387) #21	ENSEASG00005036014	CDK18 (ENSEASG00005005761) #22	MFSD4A (ENSEASG00005005757) #23	ELK4 (ENSEASG00005005755) #24	SLC45A3 (ENSEASG00005005752) #25	NUCKS1 (ENSEASG00005027593) #26	RAB29 (ENSEASG00005005748) #27	SLC41A1 (ENSEASG00005005745) #28	PM20D1 (ENSEASG00005005744) #29	SLC26A9 (ENSEASG00005005737) #30	RAB7B (ENSEASG00005005728) #31	CTSE (ENSEASG00005005723) #32	RHEX (ENSEASG00005005718) #33	AVPR1B (ENSEASG00005005715) #34	ENSEASG00005023734 #35	ENSEASG00005005706 #36	ENSEASG00005033262
Horse	MODERN SPECIES	26	PLEKHA6 (ENSECAG00000009660) #9	ENSECAG00000045931 #10	PIK3C2B (ENSECAG00000015106) #11	MDM4 (ENSECAG00000004843) #12	LRRN2 (ENSECAG00000005887)	ENSECAG00000033992	NFASC (ENSECAG00000011985) #13	CNTN2 (ENSECAG00000017600) #14	TMEM81 (ENSECAG00000005951) #15	RBBP5 (ENSECAG00000020825) #16	DSTYK (ENSECAG00000007400) #17	TMCC2 (ENSECAG00000012264) #18	NUAK2 (ENSECAG00000014699) #19	KLHDC8A (ENSECAG00000015553) #20	LEMD1 (ENSECAG00000040585) #21	CDK18 (ENSECAG00000000622) #22	MFSD4A (ENSECAG00000022333) #23	ELK4 (ENSECAG00000006540) #24	SLC45A3 (ENSECAG00000009273) #25	NUCKS1 (ENSECAG00000010336) #26	SLC41A1 (ENSECAG00000017968) #28	PM20D1 (ENSECAG00000008354) #29	SLC26A9 (ENSECAG00000015837) #30	RAB7B (ENSECAG00000005306) #31	CTSE (ENSECAG00000008566) #32	RHEX (ENSECAG00000013660) #33	AVPR1B (ENSECAG00000013720) #34	ENSECAG00000026830 #35	ENSECAG00000014082 #36	ENSECAG00000059906	IKBKE (ENSECAG00000000352) #37
Atlantogenata	ANCESTRAL SPECIES	18	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.a.c #21	ENSGT01100000266419	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Xenarthra	ANCESTRAL SPECIES	1368																ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24
Armadillo	MODERN SPECIES	3093																CDK18 (ENSDNOG00000033720) #22	MFSD4A (ENSDNOG00000008854) #23	ELK4 (ENSDNOG00000024182) #24
Afrotheria	ANCESTRAL SPECIES	34	ENSGT00390000008827 #7	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT01100000266419	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B.d #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Tenrec	MODERN SPECIES	1791																CDK18 (ENSETEG00000010305) #22
Afrotheria_a	ANCESTRAL SPECIES	34	ENSGT00940000157898.e	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT01100000266419	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B.d #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Hyrax	MODERN SPECIES	1443																CDK18 (ENSPCAG00000010431) #22
Elephant	MODERN SPECIES	71	ENSLAFG00000015943	GOLT1A (ENSLAFG00000010377) #8	PLEKHA6 (ENSLAFG00000010379) #9	PPP1R15B (ENSLAFG00000017031) #10	PIK3C2B (ENSLAFG00000017033) #11	MDM4 (ENSLAFG00000002169) #12	NFASC (ENSLAFG00000017510) #13	CNTN2 (ENSLAFG00000023023) #14	TMEM81 (ENSLAFG00000015023) #15	RBBP5 (ENSLAFG00000015962) #16	DSTYK (ENSLAFG00000015969) #17	TMCC2 (ENSLAFG00000017712) #18	NUAK2 (ENSLAFG00000014334) #19	KLHDC8A (ENSLAFG00000030908) #20	ENSLAFG00000018387	CDK18 (ENSLAFG00000007306) #22	MFSD4A (ENSLAFG00000021679) #23	ELK4 (ENSLAFG00000016043) #24	SLC45A3 (ENSLAFG00000016047) #25	NUCKS1 (ENSLAFG00000021663) #26	RAB29 (ENSLAFG00000021379) #27	SLC41A1 (ENSLAFG00000008845) #28	PM20D1 (ENSLAFG00000004254) #29	SLC26A9 (ENSLAFG00000004257) #30	RAB7B (ENSLAFG00000025583) #31	CTSE (ENSLAFG00000012132) #32	RHEX (ENSLAFG00000012129) #33	AVPR1B (ENSLAFG00000012125) #34	ENSLAFG00000003628 #35	ENSLAFG00000014764 #36	IKBKE (ENSLAFG00000022329) #37
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00390000008827 #7	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Marsupialia_b	ANCESTRAL SPECIES	6	ENSGT00390000008827 #7	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Diprotodontia	ANCESTRAL SPECIES	7	ENSGT00390000008827 #7	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Diprotodontia_a	ANCESTRAL SPECIES	3	ENSGT00390000008827 #7	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00390000004770 #33	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Common wonbat	MODERN SPECIES	1035	ENSVURG00010013274 #7	GOLT1A (ENSVURG00010013270) #8	PLEKHA6 (ENSVURG00010013180) #9	PPP1R15B (ENSVURG00010013154) #10	PIK3C2B (ENSVURG00010013129) #11	MDM4 (ENSVURG00010013091) #12	LRRN2 (ENSVURG00010013062)	NFASC (ENSVURG00010013033) #13	CNTN2 (ENSVURG00010012982) #14	TMEM81 (ENSVURG00010012973) #15	RBBP5 (ENSVURG00010012955) #16	DSTYK (ENSVURG00010012891) #17	TMCC2 (ENSVURG00010012877) #18	NUAK2 (ENSVURG00010012870) #19	KLHDC8A (ENSVURG00010012857) #20	CDK18 (ENSVURG00010012837) #22	MFSD4A (ENSVURG00010012820) #23	ELK4 (ENSVURG00010012815) #24	SLC45A3 (ENSVURG00010012805) #25	NUCKS1 (ENSVURG00010012794) #26	RAB29 (ENSVURG00010012767) #27	ENSVURG00010012757	SLC41A1 (ENSVURG00010012739) #28	PM20D1 (ENSVURG00010012723) #29	SLC26A9 (ENSVURG00010012678) #30	RAB7B (ENSVURG00010012639) #31	CTSE (ENSVURG00010012621) #32	AVPR1B (ENSVURG00010012591) #34	ENSVURG00010012525 #35	ENSVURG00010012435 #36	IKBKE (ENSVURG00010012405) #37
koala	MODERN SPECIES	99	GOLT1A (ENSPCIG00000017413) #8	PLEKHA6 (ENSPCIG00000017420) #9	ENSPCIG00000017441 #10	PIK3C2B (ENSPCIG00000017442) #11	ENSPCIG00000017445	MDM4 (ENSPCIG00000017446) #12	LRRN2 (ENSPCIG00000017448)	NFASC (ENSPCIG00000004375) #13	CNTN2 (ENSPCIG00000004391) #14	TMEM81 (ENSPCIG00000004404) #15	RBBP5 (ENSPCIG00000004412) #16	DSTYK (ENSPCIG00000004427) #17	TMCC2 (ENSPCIG00000004433) #18	NUAK2 (ENSPCIG00000004437) #19	KLHDC8A (ENSPCIG00000009456) #20	CDK18 (ENSPCIG00000030113) #22	MFSD4A (ENSPCIG00000030116) #23	ELK4 (ENSPCIG00000030120) #24	SLC45A3 (ENSPCIG00000030123) #25	NUCKS1 (ENSPCIG00000030124) #26	RAB29 (ENSPCIG00000030127) #27	ENSPCIG00000030130	SLC41A1 (ENSPCIG00000030131) #28	PM20D1 (ENSPCIG00000030137) #29	SLC26A9 (ENSPCIG00000030146) #30	RAB7B (ENSPCIG00000030153) #31	CTSE (ENSPCIG00000030156) #32	ENSPCIG00000030161 #33	AVPR1B (ENSPCIG00000035680) #34	ENSPCIG00000031229 #35	ENSPCIG00000030177 #36
Wallaby	MODERN SPECIES	2620																CDK18 (ENSMEUG00000004899) #22
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000000422 #7	GOLT1A (ENSSHAG00000001751) #8	PLEKHA6 (ENSSHAG00000001419) #9	ENSSHAG00000023379 #10	PIK3C2B (ENSSHAG00000006356) #11	MDM4 (ENSSHAG00000007767) #12	LRRN2 (ENSSHAG00000031888)	NFASC (ENSSHAG00000011503) #13	CNTN2 (ENSSHAG00000012753) #14	TMEM81 (ENSSHAG00000012925) #15	RBBP5 (ENSSHAG00000012958) #16	DSTYK (ENSSHAG00000013192) #17	TMCC2 (ENSSHAG00000013677) #18	NUAK2 (ENSSHAG00000014222) #19	KLHDC8A (ENSSHAG00000014393) #20	CDK18 (ENSSHAG00000015204) #22	MFSD4A (ENSSHAG00000015434) #23	ELK4 (ENSSHAG00000015666) #24	SLC45A3 (ENSSHAG00000021814) #25	NUCKS1 (ENSSHAG00000015999) #26	RAB29 (ENSSHAG00000023633) #27	SLC41A1 (ENSSHAG00000016179) #28	PM20D1 (ENSSHAG00000016320) #29	ENSSHAG00000005714	SLC26A9 (ENSSHAG00000016493) #30	RAB7B (ENSSHAG00000016696) #31	CTSE (ENSSHAG00000016778) #32	ENSSHAG00000028153 #33	AVPR1B (ENSSHAG00000017009) #34	ENSSHAG00000027377 #35	ENSSHAG00000024472 #36
Opossum	MODERN SPECIES	1	PLEKHA6 (ENSMODG00000001511) #9	ENSMODG00000001558 #10	PIK3C2B (ENSMODG00000001583) #11	MDM4 (ENSMODG00000001605) #12	LRRN2 (ENSMODG00000024800)	ENSMODG00000023152	NFASC (ENSMODG00000001662) #13	CNTN2 (ENSMODG00000001692) #14	TMEM81 (ENSMODG00000024792) #15	RBBP5 (ENSMODG00000001708) #16	DSTYK (ENSMODG00000048303) #17	TMCC2 (ENSMODG00000001757) #18	NUAK2 (ENSMODG00000038810) #19	KLHDC8A (ENSMODG00000001778) #20	ENSMODG00000040555	CDK18 (ENSMODG00000001795) #22	MFSD4A (ENSMODG00000001804) #23	ELK4 (ENSMODG00000001817) #24	SLC45A3 (ENSMODG00000001824) #25	ENSMODG00000001832 #26	RAB29 (ENSMODG00000001843) #27	SLC41A1 (ENSMODG00000001859) #28	ENSMODG00000037916	PM20D1 (ENSMODG00000001870) #29	SLC26A9 (ENSMODG00000001887) #30	RAB7B (ENSMODG00000001915) #31	CTSE (ENSMODG00000001939) #32	AVPR1B (ENSMODG00000001960) #34	ENSMODG00000001970 #35	ENSMODG00000001993 #36	IKBKE (ENSMODG00000002016) #37
Platypus	MODERN SPECIES	18	PLEKHA6 (ENSOANG00000039925) #9	PPP1R15B (ENSOANG00000013461) #10	PIK3C2B (ENSOANG00000013462) #11	MDM4 (ENSOANG00000013464) #12	LRRN2 (ENSOANG00000013466)	NFASC (ENSOANG00000013467) #13	CNTN2 (ENSOANG00000013469) #14	TMEM81 (ENSOANG00000013473) #15	RBBP5 (ENSOANG00000013474) #16	DSTYK (ENSOANG00000012134) #17	TMCC2 (ENSOANG00000013475) #18	NUAK2 (ENSOANG00000013349) #19	KLHDC8A (ENSOANG00000012776) #20	ENSOANG00000046020	ENSOANG00000040818	CDK18 (ENSOANG00000036435) #22	MFSD4A (ENSOANG00000002146) #23	ELK4 (ENSOANG00000002147) #24	SLC45A3 (ENSOANG00000050608) #25	ENSOANG00000002148 #27	SLC41A1 (ENSOANG00000038348) #28	PM20D1 (ENSOANG00000002953) #29	SLC26A9 (ENSOANG00000013053) #30	RAB7B (ENSOANG00000042048) #31	ENSOANG00000039981 #33	AVPR1B (ENSOANG00000039962) #34	ENSOANG00000028370 #35	ENSOANG00000005383 #36	IKBKE (ENSOANG00000005385) #37	RASSF5 (ENSOANG00000036715)	EIF2D (ENSOANG00000002339)
Sauria	ANCESTRAL SPECIES	24	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00960000188350	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Lepidosauria	ANCESTRAL SPECIES	6	ENSGT00960000189623	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a.b #37	ENSGT00940000159288
Episquamata	ANCESTRAL SPECIES	1	ENSGT00960000189623	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a.b #37	ENSGT00940000159288
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00960000189623	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a.b #37	ENSGT00940000159288
Elapidae	ANCESTRAL SPECIES	1	ENSGT00960000189623	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a.c #12	ENSGT00940000161204	ENSGT00940000157024.a #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A.c #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00940000159288	ENSGT00550000074865
Elapidae_a	ANCESTRAL SPECIES	66	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a.c #12	ENSGT00940000161204	ENSGT00940000157024.a #13	ENSGT00940000157024.b #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A.c #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00940000159288	ENSGT00550000074865
Acanthophiinae	ANCESTRAL SPECIES	63	ENSGT00960000189623	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a.c #12	ENSGT00940000161204	ENSGT00940000157024.a #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A.c #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00940000159288	ENSGT00550000074865
Eastern brown snake	MODERN SPECIES	78	PLEKHA6 (ENSPTXG00000013318) #9	PPP1R15B (ENSPTXG00000013321) #10	PIK3C2B (ENSPTXG00000013322) #11	ENSPTXG00000013324 #12	ENSPTXG00000013326 #12	LRRN2 (ENSPTXG00000013327)	ENSPTXG00000013328	NFASC (ENSPTXG00000013336) #13	CNTN2 (ENSPTXG00000013539) #14	TMEM81 (ENSPTXG00000013561) #15	RBBP5 (ENSPTXG00000013563) #16	DSTYK (ENSPTXG00000013566) #17	TMCC2 (ENSPTXG00000013570) #18	NUAK2 (ENSPTXG00000013574) #19	KLHDC8A (ENSPTXG00000013577) #20	CDK18 (ENSPTXG00000013585) #22	MFSD4A (ENSPTXG00000013590) #23	ELK4 (ENSPTXG00000013593) #24	ENSPTXG00000013596	SLC45A3 (ENSPTXG00000013597) #25	NUCKS1 (ENSPTXG00000013599) #26	RAB29 (ENSPTXG00000013602) #27	SLC41A1 (ENSPTXG00000013605) #28	PM20D1 (ENSPTXG00000013607) #29	SLC26A9 (ENSPTXG00000013611) #30	RAB7B (ENSPTXG00000013615) #31	CTSE (ENSPTXG00000013627) #32	AVPR1B (ENSPTXG00000013787) #34	ENSPTXG00000013790 #35	ENSPTXG00000013791 #36	RASSF5 (ENSPTXG00000013793)
Mainland tiger snake	MODERN SPECIES	86	PLEKHA6 (ENSNSUG00000016509) #9	PPP1R15B (ENSNSUG00000016508) #10	PIK3C2B (ENSNSUG00000016507) #11	MDM4 (ENSNSUG00000016506) #12	LRRN2 (ENSNSUG00000016505)	ENSNSUG00000016503 #13	ENSNSUG00000016502 #13	CNTN2 (ENSNSUG00000016501) #14	TMEM81 (ENSNSUG00000016500) #15	RBBP5 (ENSNSUG00000016499) #16	DSTYK (ENSNSUG00000016498) #17	ENSNSUG00000016497 #18	TMCC2 (ENSNSUG00000016496) #18	NUAK2 (ENSNSUG00000016487) #19	KLHDC8A (ENSNSUG00000016486) #20	CDK18 (ENSNSUG00000016483) #22	MFSD4A (ENSNSUG00000016482) #23	ELK4 (ENSNSUG00000016465) #24	ENSNSUG00000016463	ENSNSUG00000016462 #25	NUCKS1 (ENSNSUG00000016460) #26	RAB29 (ENSNSUG00000016459) #27	SLC41A1 (ENSNSUG00000016458) #28	PM20D1 (ENSNSUG00000016456) #29	SLC26A9 (ENSNSUG00000016455) #30	RAB7B (ENSNSUG00000016454) #31	CTSE (ENSNSUG00000016424) #32	AVPR1B (ENSNSUG00000016423) #34	ENSNSUG00000016422 #35	ENSNSUG00000016405 #36	RASSF5 (ENSNSUG00000016404)
Blue-lipped sea krait	MODERN SPECIES	3987													DNTTIP2 (ENSLLTG00000003753)	GCLM (ENSLLTG00000003777)	ENSLLTG00000003803	CDK18 (ENSLLTG00000003858) #22	ENSLLTG00000003890 #23
Indian cobra	MODERN SPECIES	2	ENSNNAG00000002902	GOLT1A (ENSNNAG00000002897) #8	PLEKHA6 (ENSNNAG00000002844) #9	PPP1R15B (ENSNNAG00000002823) #10	PIK3C2B (ENSNNAG00000002809) #11	MDM4 (ENSNNAG00000002803) #12	LRRN2 (ENSNNAG00000002798)	NFASC (ENSNNAG00000001590) #13	CNTN2 (ENSNNAG00000001117) #14	TMEM81 (ENSNNAG00000001103) #15	RBBP5 (ENSNNAG00000000969) #16	DSTYK (ENSNNAG00000000930) #17	TMCC2 (ENSNNAG00000000921) #18	NUAK2 (ENSNNAG00000000904) #19	KLHDC8A (ENSNNAG00000000883) #20	CDK18 (ENSNNAG00000000847) #22	MFSD4A (ENSNNAG00000000830) #23	ELK4 (ENSNNAG00000000811) #24	ENSNNAG00000009294	SLC45A3 (ENSNNAG00000009276) #25	NUCKS1 (ENSNNAG00000009251) #26	RAB29 (ENSNNAG00000009223) #27	SLC41A1 (ENSNNAG00000009194) #28	PM20D1 (ENSNNAG00000009161) #29	SLC26A9 (ENSNNAG00000008890) #30	RAB7B (ENSNNAG00000008857) #31	CTSE (ENSNNAG00000008738) #32	AVPR1B (ENSNNAG00000008693) #34	ENSNNAG00000008485 #36	RASSF5 (ENSNNAG00000008453)	EIF2D (ENSNNAG00000008419)
Lizard	MODERN SPECIES	842															ENSACAG00000039343	CDK18 (ENSACAG00000014284) #22	MFSD4A (ENSACAG00000014261) #23	ELK4 (ENSACAG00000014244) #24	ENSACAG00000037258	ENSACAG00000012356	SLC45A3 (ENSACAG00000027261) #25	NUCKS1 (ENSACAG00000012396) #26	RAB29 (ENSACAG00000012440) #27	SLC41A1 (ENSACAG00000012492) #28	PM20D1 (ENSACAG00000012585) #29	SLC26A9 (ENSACAG00000012642) #30	RAB7B (ENSACAG00000012784) #31	ENSACAG00000012795 #32	ENSACAG00000040525 #32	AVPR1B (ENSACAG00000038166) #34	fam72a (ENSACAG00000040569) #35
Laterata	ANCESTRAL SPECIES	3	ENSGT00960000189623	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a.b #37	ENSGT00940000159288
Argentine black and white tegu	MODERN SPECIES	16	ENSSMRG00000003120	GOLT1A (ENSSMRG00000003124) #8	PLEKHA6 (ENSSMRG00000003142) #9	PPP1R15B (ENSSMRG00000003168) #10	PIK3C2B (ENSSMRG00000003169) #11	MDM4 (ENSSMRG00000003279) #12	LRRN2 (ENSSMRG00000003285)	NFASC (ENSSMRG00000003345) #13	CNTN2 (ENSSMRG00000008113) #14	TMEM81 (ENSSMRG00000008121) #15	RBBP5 (ENSSMRG00000008126) #16	DSTYK (ENSSMRG00000008130) #17	TMCC2 (ENSSMRG00000008135) #18	NUAK2 (ENSSMRG00000008194) #19	KLHDC8A (ENSSMRG00000008199) #20	CDK18 (ENSSMRG00000008223) #22	MFSD4A (ENSSMRG00000008246) #23	ELK4 (ENSSMRG00000008252) #24	ENSSMRG00000008254	SLC45A3 (ENSSMRG00000008263) #25	NUCKS1 (ENSSMRG00000008283) #26	RAB29 (ENSSMRG00000008290) #27	SLC41A1 (ENSSMRG00000008292) #28	PM20D1 (ENSSMRG00000008296) #29	SLC26A9 (ENSSMRG00000008301) #30	RAB7B (ENSSMRG00000008304) #31	ENSSMRG00000008307 #32	ENSSMRG00000008343 #32	AVPR1B (ENSSMRG00000008577) #34	ENSSMRG00000008581 #35	ENSSMRG00000008597 #36
Common wall lizard	MODERN SPECIES	14	PPP1R15B (ENSPMRG00000014410) #10	PIK3C2B (ENSPMRG00000014418) #11	MDM4 (ENSPMRG00000014437) #12	LRRN2 (ENSPMRG00000014443)	ENSPMRG00000014446	NFASC (ENSPMRG00000014457) #13	CNTN2 (ENSPMRG00000005222) #14	TMEM81 (ENSPMRG00000005229) #15	RBBP5 (ENSPMRG00000005234) #16	DSTYK (ENSPMRG00000005255) #17	TMCC2 (ENSPMRG00000005273) #18	NUAK2 (ENSPMRG00000005282) #19	KLHDC8A (ENSPMRG00000005291) #20	ENSPMRG00000005298	ENSPMRG00000005305	CDK18 (ENSPMRG00000005314) #22	MFSD4A (ENSPMRG00000005333) #23	ELK4 (ENSPMRG00000005358) #24	ENSPMRG00000005363	SLC45A3 (ENSPMRG00000005368) #25	NUCKS1 (ENSPMRG00000005382) #26	RAB29 (ENSPMRG00000005393) #27	SLC41A1 (ENSPMRG00000005400) #28	PM20D1 (ENSPMRG00000005415) #29	SLC26A9 (ENSPMRG00000005436) #30	RAB7B (ENSPMRG00000005475) #31	CTSE (ENSPMRG00000005484) #32	AVPR1B (ENSPMRG00000005492) #34	ENSPMRG00000005495 #35	ENSPMRG00000005517 #36	ENSPMRG00000005625 #37
tuatara	MODERN SPECIES	579	ELOVL3 (ENSSPUG00000014743)	GBF1 (ENSSPUG00000014652)	ENSSPUG00000014630	NFKB2 (ENSSPUG00000014608)	PSD (ENSSPUG00000014570)	FBXL15 (ENSSPUG00000014556)	CUEDC2 (ENSSPUG00000014547)	PAX2 (ENSSPUG00000014528)	NFASC (ENSSPUG00000014492) #13	CNTN2 (ENSSPUG00000014464) #14	RBBP5 (ENSSPUG00000014435) #16	DSTYK (ENSSPUG00000014411) #17	TMCC2 (ENSSPUG00000014399) #18	NUAK2 (ENSSPUG00000014390) #19	KLHDC8A (ENSSPUG00000014381) #20	CDK18 (ENSSPUG00000014358) #22	MFSD4A (ENSSPUG00000014293) #23	ENSSPUG00000014278 #24	ENSSPUG00000014268 #24	SLC45A3 (ENSSPUG00000014258) #25
Archelosauria	ANCESTRAL SPECIES	22	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00960000188350	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Cryptodira	ANCESTRAL SPECIES	27	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00960000188350	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Testudinoidea	ANCESTRAL SPECIES	22	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948.k #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00960000188350	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363.c #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106.a.a #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Emydidae	ANCESTRAL SPECIES	25	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948.k #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00960000188350	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b.gc #25	ENSGT00940000153414.B #26	ENSGT00940000159363.c #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106.a.a #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	95	ENSTMTG00000019263	ENSTMTG00000017501 #9	ENSTMTG00000017390 #10	ENSTMTG00000017320 #11	ENSTMTG00000017290 #12	ENSTMTG00000017280	ENSTMTG00000017081 #13	ENSTMTG00000016996 #14	ENSTMTG00000016983 #15	ENSTMTG00000016595 #16	DSTYK (ENSTMTG00000015552) #17	ENSTMTG00000015469 #18	ENSTMTG00000015457 #19	ENSTMTG00000015440 #20	ENSTMTG00000015435	ENSTMTG00000015397 #22	ENSTMTG00000015356 #23	ENSTMTG00000015309 #24	ENSTMTG00000015294	ENSTMTG00000015287 #25	ENSTMTG00000015279 #25	ENSTMTG00000015263 #26	ENSTMTG00000015243 #28	ENSTMTG00000015229 #29	ENSTMTG00000015192 #30	ENSTMTG00000015177 #31	ENSTMTG00000015100 #32	ENSTMTG00000015061 #34	ENSTMTG00000015047 #35	ENSTMTG00000014803 #36	ENSTMTG00000014760 #37
Three-toed box turtle	MODERN SPECIES	96	ENSTMTG00000008748	ENSTMTG00000008701 #9	ENSTMTG00000008668 #10	ENSTMTG00000008258 #11	ENSTMTG00000008199 #12	ENSTMTG00000008179 #12	ENSTMTG00000008166	ENSTMTG00000007969 #13	ENSTMTG00000007896 #14	ENSTMTG00000007878 #15	ENSTMTG00000007863 #16	ENSTMTG00000007850 #17	ENSTMTG00000007839 #18	ENSTMTG00000007820 #19	ENSTMTG00000007796 #20	ENSTMTG00000007730 #22	ENSTMTG00000007673 #23	ENSTMTG00000007659 #24	ENSTMTG00000007643	ENSTMTG00000007632 #25	ENSTMTG00000007605 #26	ENSTMTG00000007576 #28	ENSTMTG00000007523 #29	ENSTMTG00000007461 #30	ENSTMTG00000007396 #31	ENSTMTG00000007277 #32	ENSTMTG00000007243 #34	ENSTMTG00000007226 #35	ENSTMTG00000007068 #36	ENSTMTG00000007018 #37	ENSTMTG00000006962
painted turtle	MODERN SPECIES	813	ENSCPBG00000001136	ENSCPBG00000001148	PIK3C2B (ENSCPBG00000001168) #11	MDM4 (ENSCPBG00000001199) #12	LRRN2 (ENSCPBG00000001210)	NFASC (ENSCPBG00000001242) #13	CNTN2 (ENSCPBG00000001401) #14	TMEM81 (ENSCPBG00000001437) #15	RBBP5 (ENSCPBG00000001441) #16	DSTYK (ENSCPBG00000001461) #17	TMCC2 (ENSCPBG00000001483) #18	ENSCPBG00000001490	NUAK2 (ENSCPBG00000001503) #19	KLHDC8A (ENSCPBG00000001512) #20	ENSCPBG00000001525	CDK18 (ENSCPBG00000001546) #22	MFSD4A (ENSCPBG00000001577) #23	ELK4 (ENSCPBG00000001590) #24	ENSCPBG00000001604	ENSCPBG00000001610 #25	ENSCPBG00000001619 #25	NUCKS1 (ENSCPBG00000001632) #26	RAB29 (ENSCPBG00000001650) #27	SLC41A1 (ENSCPBG00000001663) #28	PM20D1 (ENSCPBG00000001677) #29	SLC26A9 (ENSCPBG00000001694) #30	RAB7B (ENSCPBG00000001722) #31	CTSE (ENSCPBG00000001757) #32	ENSCPBG00000001796	AVPR1B (ENSCPBG00000001806) #34	ENSCPBG00000001819 #35
Testudinidae	ANCESTRAL SPECIES	26	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948.k #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00960000188350	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363.c #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106.a.a #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37	ENSGT00940000159288
Abingdon island giant tortoise	MODERN SPECIES	1701					LRRN2 (ENSCABG00000002178)	NFASC (ENSCABG00000002182) #13	CNTN2 (ENSCABG00000002187) #14	TMEM81 (ENSCABG00000002189) #15	RBBP5 (ENSCABG00000002190) #16	DSTYK (ENSCABG00000002198) #17	TMCC2 (ENSCABG00000002694) #18	ENSCABG00000002703 #19	ENSCABG00000002707 #19	KLHDC8A (ENSCABG00000002711) #20	ENSCABG00000002720	CDK18 (ENSCABG00000002726) #22	MFSD4A (ENSCABG00000002734) #23	ELK4 (ENSCABG00000002746) #24	ENSCABG00000002775	SLC45A3 (ENSCABG00000002778) #25	NUCKS1 (ENSCABG00000002780) #26	RAB29 (ENSCABG00000002781) #27	SLC41A1 (ENSCABG00000002783) #28	PM20D1 (ENSCABG00000002787) #29	SLC26A9 (ENSCABG00000002792) #30	RAB7B (ENSCABG00000002795) #31	CTSE (ENSCABG00000002820) #32	AVPR1B (ENSCABG00000003149) #34	ENSCABG00000003157 #35	ENSCABG00000003173 #36	IKBKE (ENSCABG00000003289) #37
Goode s thornscrub tortoise	MODERN SPECIES	18	ENSGEVG00005001372	PLEKHA6 (ENSGEVG00005001426) #9	PPP1R15B (ENSGEVG00005001524) #10	PIK3C2B (ENSGEVG00005001547) #11	MDM4 (ENSGEVG00005001619) #12	LRRN2 (ENSGEVG00005001650)	NFASC (ENSGEVG00005001725) #13	RBBP5 (ENSGEVG00005001875) #16	CNTN2 (ENSGEVG00005001932) #14	DSTYK (ENSGEVG00005001969) #17	TMCC2 (ENSGEVG00005001984) #18	NUAK2 (ENSGEVG00005002000) #19	KLHDC8A (ENSGEVG00005002017) #20	ENSGEVG00005002032	ENSGEVG00005002050	CDK18 (ENSGEVG00005002146) #22	MFSD4A (ENSGEVG00005002272) #23	ELK4 (ENSGEVG00005002285) #24	ENSGEVG00005002299	SLC45A3 (ENSGEVG00005002309) #25	NUCKS1 (ENSGEVG00005002323) #26	RAB29 (ENSGEVG00005002347) #27	SLC41A1 (ENSGEVG00005002367) #28	PM20D1 (ENSGEVG00005002391) #29	SLC26A9 (ENSGEVG00005002435) #30	RAB7B (ENSGEVG00005002474) #31	CTSE (ENSGEVG00005002501) #32	AVPR1B (ENSGEVG00005002511) #34	ENSGEVG00005002525 #35	ENSGEVG00005002537 #36	IKBKE (ENSGEVG00005002566) #37
Chinese turtle	MODERN SPECIES	2246											ENSPSIG00000017262	TBL1XR1 (ENSPSIG00000017266)	NAALADL2 (ENSPSIG00000008237)	NLGN1 (ENSPSIG00000008922)	ENSPSIG00000000233	CDK18 (ENSPSIG00000009607) #22	MFSD4A (ENSPSIG00000012058) #23	ELK4 (ENSPSIG00000013052) #24	ENSPSIG00000013477	SLC45A3 (ENSPSIG00000013533) #25	ENSPSIG00000014060	ENSPSIG00000014075	ENSPSIG00000014334	ENSPSIG00000014539	ENSPSIG00000014789	ENSPSIG00000000238	TMEM47 (ENSPSIG00000014892)
Archosauria	ANCESTRAL SPECIES	23	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00960000188350	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Aves	ANCESTRAL SPECIES	25	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00960000188350	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Neognathae	ANCESTRAL SPECIES	24	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Galloanserae	ANCESTRAL SPECIES	35	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b.m.b #36	ENSGT00950000182824.a.a.b.b.n #36
Anatidae	ANCESTRAL SPECIES	42	ENSGT00940000157898	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b.m.b #36	ENSGT00950000182937.B.a #37
Pink-footed goose	MODERN SPECIES	129	ETNK2 (ENSABRG00000012485)	REN (ENSABRG00000012471)	GOLT1A (ENSABRG00000012462) #8	PLEKHA6 (ENSABRG00000012421) #9	PPP1R15B (ENSABRG00000012394) #10	PIK3C2B (ENSABRG00000012371) #11	MDM4 (ENSABRG00000012365) #12	LRRN2 (ENSABRG00000012364)	NFASC (ENSABRG00000004991) #13	CNTN2 (ENSABRG00000004374) #14	RBBP5 (ENSABRG00000004333) #16	DSTYK (ENSABRG00000003779) #17	TMCC2 (ENSABRG00000003744) #18	NUAK2 (ENSABRG00000003731) #19	KLHDC8A (ENSABRG00000003721) #20	CDK18 (ENSABRG00000003694) #22	MFSD4A (ENSABRG00000003679) #23	ELK4 (ENSABRG00000003666) #24	SLC45A3 (ENSABRG00000003633) #25	NUCKS1 (ENSABRG00000003620) #26	RAB29 (ENSABRG00000003604) #27	SLC41A1 (ENSABRG00000003545) #28	PM20D1 (ENSABRG00000003486) #29	SLC26A9 (ENSABRG00000003325) #30	RAB7B (ENSABRG00000003306) #31	CTSE (ENSABRG00000003288) #32	ENSABRG00000003280	AVPR1B (ENSABRG00000003274) #34	ENSABRG00000003257 #35	ENSABRG00000003238 #36	IKBKE (ENSABRG00000003202) #37
Duck	MODERN SPECIES	18	ENSAPLG00000006673	SOX13 (ENSAPLG00000016687)	ETNK2 (ENSAPLG00000012663)	REN (ENSAPLG00000012376)	GOLT1A (ENSAPLG00000027994) #8	ENSAPLG00000030874 #9	PIK3C2B (ENSAPLG00000023158) #11	MDM4 (ENSAPLG00000012694) #12	LRRN2 (ENSAPLG00000013110)	NFASC (ENSAPLG00000006326) #13	CNTN2 (ENSAPLG00000005748) #14	TMEM81 (ENSAPLG00000000640) #15	RBBP5 (ENSAPLG00000005563) #16	DSTYK (ENSAPLG00000005300) #17	NUAK2 (ENSAPLG00000020575) #19	CDK18 (ENSAPLG00000004817) #22	MFSD4A (ENSAPLG00000004747) #23	ELK4 (ENSAPLG00000004738) #24	ENSAPLG00000004698	ELF3 (ENSAPLG00000026589)	KIF21B (ENSAPLG00000004318)	ENSAPLG00000024836	CACNA1S (ENSAPLG00000002552)	ENSAPLG00000018472	BRPF3 (ENSAPLG00000000598)	ENSAPLG00000015505	MAPK13 (ENSAPLG00000002168)	MAPK14 (ENSAPLG00000002603)	SLC26A8 (ENSAPLG00000002988) ##30	SRPK1 (ENSAPLG00000003371)	LHFPL5 (ENSAPLG00000028023)
Phasianidae	ANCESTRAL SPECIES	22	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b.m.b #36	ENSGT00950000182824.a.a.b.b.n #36
Phasianidae_b	ANCESTRAL SPECIES	22	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b.n #36	ENSGT00950000182937.B.a #37
Chicken	MODERN SPECIES	18	GOLT1A (ENSGALG00010027345) #8	PLEKHA6 (ENSGALG00010027365) #9	ENSGALG00010027369 #10	PIK3C2B (ENSGALG00010027372) #11	MDM4 (ENSGALG00010027229) #12	LRRN2 (ENSGALG00010027241)	NFASC (ENSGALG00010027311) #13	CNTN2 (ENSGALG00010027385) #14	TMEM81 (ENSGALG00010027747) #15	RBBP5 (ENSGALG00010027392) #16	DSTYK (ENSGALG00010027376) #17	TMCC2 (ENSGALG00010025303) #18	NUAK2 (ENSGALG00010025318) #19	KLHDC8A (ENSGALG00010025323) #20	ENSGALG00010027737	CDK18 (ENSGALG00010026942) #22	MFSD4A (ENSGALG00010026954) #23	ELK4 (ENSGALG00010026977) #24	ENSGALG00010027015	SLC45A3 (ENSGALG00010027026) #25	NUCKS1 (ENSGALG00010027036) #26	RAB7L1 (ENSGALG00010027063) #27	SLC41A1 (ENSGALG00010027075) #28	PM20D1 (ENSGALG00010027079) #29	SLC26A9 (ENSGALG00010027082) #30	RAB7B (ENSGALG00010027087) #31	CTSE (ENSGALG00010027089) #32	ENSGALG00010027090	AVPR1B (ENSGALG00010027091) #34	ENSGALG00010027092 #35	ENSGALG00010027097 #36
Turkey	MODERN SPECIES	20	ENSMGAG00000003453 #35	ENSMGAG00000019365 #31	ENSMGAG00000003404 #32	ENSMGAG00000021431	AVPR1B (ENSMGAG00000003443) #34	SLC26A9 (ENSMGAG00000003329) #30	PM20D1 (ENSMGAG00000003150) #29	ENSMGAG00000020244 #27	ENSMGAG00000003090 #28	NUCKS1 (ENSMGAG00000003038) #26	ENSMGAG00000003015 #25	ENSMGAG00000003006	ENSMGAG00000002997 #24	ENSMGAG00000002978 #23	ENSMGAG00000021796	ENSMGAG00000005267 #22	KLHDC8A (ENSMGAG00000002954) #20	ENSMGAG00000001141 #18	ENSMGAG00000019191 #18	ENSMGAG00000022507 #19	DSTYK (ENSMGAG00000001096) #17	ENSMGAG00000001045 #16	ENSMGAG00000015787 #15	ENSMGAG00000000981 #14	ENSMGAG00000000890 #13	ENSMGAG00000015661	ENSMGAG00000002885 #12	ENSMGAG00000002803 #11	ENSMGAG00000002796 #10	PLEKHA6 (ENSMGAG00000002650) #9	REN (ENSMGAG00000002701)
Japanese quail	MODERN SPECIES	18	REN (ENSCJPG00005009403)	GOLT1A (ENSCJPG00005009405) #8	PLEKHA6 (ENSCJPG00005009415) #9	PPP1R15B (ENSCJPG00005009707) #10	MDM4 (ENSCJPG00005009987) #12	LRRN2 (ENSCJPG00005010010)	NFASC (ENSCJPG00005010027) #13	CNTN2 (ENSCJPG00005014241) #14	TMEM81 (ENSCJPG00005014924) #15	RBBP5 (ENSCJPG00005014929) #16	DSTYK (ENSCJPG00005014954) #17	ENSCJPG00005015008 #18	TMCC2 (ENSCJPG00005015011) #18	NUAK2 (ENSCJPG00005015013) #19	KLHDC8A (ENSCJPG00005015014) #20	CDK18 (ENSCJPG00005015016) #22	MFSD4A (ENSCJPG00005015017) #23	ELK4 (ENSCJPG00005015018) #24	SLC45A3 (ENSCJPG00005015019) #25	NUCKS1 (ENSCJPG00005015020) #26	RAB29 (ENSCJPG00005015021) #27	SLC41A1 (ENSCJPG00005015022) #28	PM20D1 (ENSCJPG00005015023) #29	SLC26A9 (ENSCJPG00005015024) #30	RAB7B (ENSCJPG00005015025) #31	CTSE (ENSCJPG00005015026) #32	AVPR1B (ENSCJPG00005015027) #34	ENSCJPG00005015028	ENSCJPG00005015029 #35	ENSCJPG00005015033 #36	ENSCJPG00005015034 #36
Neognathae_b	ANCESTRAL SPECIES	24	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Passeriformes	ANCESTRAL SPECIES	21	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263.d #11	ENSGT00940000158263.c.a #11	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b.j #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Great tit	MODERN SPECIES	19	PPP1R15B (ENSPMJG00000017456) #10	PIK3C2B (ENSPMJG00000017028) #11	MDM4 (ENSPMJG00000017026) #12	LRRN2 (ENSPMJG00000017025)	NFASC (ENSPMJG00000017023) #13	CNTN2 (ENSPMJG00000017022) #14	TMEM81 (ENSPMJG00000017021) #15	RBBP5 (ENSPMJG00000016971) #16	DSTYK (ENSPMJG00000016969) #17	ENSPMJG00000016968	TMCC2 (ENSPMJG00000016966) #18	NUAK2 (ENSPMJG00000016965) #19	KLHDC8A (ENSPMJG00000016963) #20	ENSPMJG00000016961	ENSPMJG00000016960	CDK18 (ENSPMJG00000016887) #22	MFSD4A (ENSPMJG00000016883) #23	ELK4 (ENSPMJG00000016882) #24	ENSPMJG00000016880	SLC45A3 (ENSPMJG00000016878) #25	NUCKS1 (ENSPMJG00000016877) #26	RAB29 (ENSPMJG00000016876) #27	SLC41A1 (ENSPMJG00000016875) #28	PM20D1 (ENSPMJG00000016873) #29	SLC26A9 (ENSPMJG00000016871) #30	RAB7B (ENSPMJG00000016868) #31	CTSE (ENSPMJG00000016864) #32	ENSPMJG00000016862	AVPR1B (ENSPMJG00000016860) #34	ENSPMJG00000016859 #35	ENSPMJG00000016384 #36
Passeriformes_d	ANCESTRAL SPECIES	21	ENSGT00940000157898.b	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263.d #11	ENSGT00530000063539.a.l #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b.ec #25	ENSGT00940000166195	ENSGT00950000182914.b.dc #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b.j #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36
Flycatcher	MODERN SPECIES	18	MOV10 (ENSFALG00000000722)	CAPZA1 (ENSFALG00000000695)	ST7L (ENSFALG00000000682)	WNT2B (ENSFALG00000000672)	CTTNBP2NL (ENSFALG00000000670)	KCND3 (ENSFALG00000000668)	ENSFALG00000023135	DDX20 (ENSFALG00000000666)	ENSFALG00000024242	ENSFALG00000025619	ADORA3 (ENSFALG00000025248)	DSTYK (ENSFALG00000000621) #17	WDR77 (ENSFALG00000000642)	TMCC2 (ENSFALG00000000625) #18	KLHDC8A (ENSFALG00000000617) #20	CDK18 (ENSFALG00000000616) #22	MFSD4A (ENSFALG00000000613) #23	ELK4 (ENSFALG00000000609) #24	ENSFALG00000027139	ENSFALG00000028728 #25	ENSFALG00000000606 #25	RAB29 (ENSFALG00000000601) #27	SLC41A1 (ENSFALG00000000596) #28	PM20D1 (ENSFALG00000000591) #29	SLC26A9 (ENSFALG00000000588) #30	RAB7B (ENSFALG00000000584) #31	CTSE (ENSFALG00000000576) #32	AVPR1B (ENSFALG00000000573) #34	ENSFALG00000000572 #35	ENSFALG00000000569 #36	IKBKE (ENSFALG00000000567) #37
Passeriformes_g	ANCESTRAL SPECIES	24	ENSGT00940000157898.a.a	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263.d #11	ENSGT00530000063539.a.l #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT01080000259690	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b.dc #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b.j #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Passeroidea	ANCESTRAL SPECIES	24	ENSGT00940000157898.a.a	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263.d #11	ENSGT00530000063539.a.l #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000159482 #22	ENSGT01080000259690	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b.dc #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT01050000244882.a.a.a.b.j #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Zebra finch	MODERN SPECIES	19	GOLT1A (ENSTGUG00000024624) #8	PLEKHA6 (ENSTGUG00000017471) #9	PPP1R15B (ENSTGUG00000019420) #10	ENSTGUG00000025979	PIK3C2B (ENSTGUG00000017474) #11	MDM4 (ENSTGUG00000029771) #12	LRRN2 (ENSTGUG00000017481)	NFASC (ENSTGUG00000017486) #13	CNTN2 (ENSTGUG00000017494) #14	RBBP5 (ENSTGUG00000018935) #16	ENSTGUG00000029069 #15	DSTYK (ENSTGUG00000025980) #17	TMCC2 (ENSTGUG00000017499) #18	NUAK2 (ENSTGUG00000021994) #19	KLHDC8A (ENSTGUG00000023733) #20	CDK18 (ENSTGUG00000020028) #22	ENSTGUG00000022452	MFSD4A (ENSTGUG00000017518) #23	ELK4 (ENSTGUG00000026990) #24	SLC45A3 (ENSTGUG00000022751) #25	NUCKS1 (ENSTGUG00000017515) #26	RAB29 (ENSTGUG00000025440) #27	SLC41A1 (ENSTGUG00000028448) #28	PM20D1 (ENSTGUG00000017511) #29	SLC26A9 (ENSTGUG00000017509) #30	RAB7B (ENSTGUG00000021887) #31	CTSE (ENSTGUG00000017507) #32	ENSTGUG00000017506 #34	FAM72A (ENSTGUG00000019501) #35	ENSTGUG00000001112 #36	IKBKE (ENSTGUG00000001109) #37
Medium ground finch	MODERN SPECIES	175																CDK18 (ENSGFOG00000003536) #22	ENSGFOG00000003673	MFSD4A (ENSGFOG00000003698) #23	ELK4 (ENSGFOG00000003728) #24	SLC45A3 (ENSGFOG00000003739) #25	NUCKS1 (ENSGFOG00000003757) #26	RAB29 (ENSGFOG00000003769) #27	SLC41A1 (ENSGFOG00000003802) #28	ENSGFOG00000003817	PM20D1 (ENSGFOG00000003844) #29	SLC26A9 (ENSGFOG00000003908) #30	RAB7B (ENSGFOG00000003944) #31	CTSE (ENSGFOG00000003961) #32	ENSGFOG00000004053 #35	ENSGFOG00000004128 #36	IKBKE (ENSGFOG00000004357) #37
Neognathae_c	ANCESTRAL SPECIES	27	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00530000063539.a.i #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000159193 #14	ENSGT00390000006349 #15	ENSGT00530000064100 #16	ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT01090000261578	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000159363 #27	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT01100000263544.c.a.b.b #30	ENSGT00940000161943 #31	ENSGT00940000161300 #32	ENSGT00950000185862	ENSGT01050000244882.a.a.a.b #34	ENSGT00390000005106 #35	ENSGT00950000182824.a.a.b.b #36	ENSGT00950000182937.B.a #37
Kakapo	MODERN SPECIES	30	TRIM33 (ENSSHBG00005016976)	SYT6 (ENSSHBG00005016996)	PPP1R15B (ENSSHBG00005017000) #10	PIK3C2B (ENSSHBG00005017093) #11	ENSSHBG00005018459 #12	ENSSHBG00005018462 #12	LRRN2 (ENSSHBG00005018464)	NFASC (ENSSHBG00005018471) #13	CNTN2 (ENSSHBG00005018482) #14	TMEM81 (ENSSHBG00005018486) #15	RBBP5 (ENSSHBG00005018490) #16	DSTYK (ENSSHBG00005018494) #17	TMCC2 (ENSSHBG00005018499) #18	NUAK2 (ENSSHBG00005018500) #19	KLHDC8A (ENSSHBG00005018504) #20	CDK18 (ENSSHBG00005018522) #22	MFSD4A (ENSSHBG00005018597) #23	ELK4 (ENSSHBG00005018604) #24	SLC45A3 (ENSSHBG00005018608) #25	NUCKS1 (ENSSHBG00005018614) #26	RAB29 (ENSSHBG00005018619) #27	SLC41A1 (ENSSHBG00005018622) #28	PM20D1 (ENSSHBG00005018625) #29	SLC26A9 (ENSSHBG00005018630) #30	RAB7B (ENSSHBG00005018652) #31	CTSE (ENSSHBG00005018662) #32	ENSSHBG00005018683	AVPR1B (ENSSHBG00005018687) #34	ENSSHBG00005018697 #35	ENSSHBG00005018720 #36	IKBKE (ENSSHBG00005018887) #37
Golden eagle	MODERN SPECIES	16	GOLT1A (ENSACCG00020015831) #8	PLEKHA6 (ENSACCG00020015766) #9	PPP1R15B (ENSACCG00020015709) #10	PIK3C2B (ENSACCG00020015669) #11	MDM4 (ENSACCG00020015634) #12	LRRN2 (ENSACCG00020015616)	NFASC (ENSACCG00020015504) #13	CNTN2 (ENSACCG00020015399) #14	TMEM81 (ENSACCG00020015382) #15	RBBP5 (ENSACCG00020015366) #16	DSTYK (ENSACCG00020015328) #17	TMCC2 (ENSACCG00020015290) #18	NUAK2 (ENSACCG00020015261) #19	KLHDC8A (ENSACCG00020015239) #20	ENSACCG00020015227	CDK18 (ENSACCG00020015198) #22	MFSD4A (ENSACCG00020015157) #23	ELK4 (ENSACCG00020015127) #24	ENSACCG00020015107	SLC45A3 (ENSACCG00020015092) #25	NUCKS1 (ENSACCG00020015070) #26	RAB29 (ENSACCG00020015045) #27	SLC41A1 (ENSACCG00020015025) #28	PM20D1 (ENSACCG00020015007) #29	SLC26A9 (ENSACCG00020014963) #30	ENSACCG00020014938	RAB7B (ENSACCG00020014897) #31	CTSE (ENSACCG00020014841) #32	ENSACCG00020014799	AVPR1B (ENSACCG00020014789) #34	ENSACCG00020014778 #35
African ostrich	MODERN SPECIES	518	ETNK2 (ENSSCUG00000008640)	REN (ENSSCUG00000008639)	GOLT1A (ENSSCUG00000008637) #8	ENSSCUG00000008635 #9	ENSSCUG00000008634	MDM4 (ENSSCUG00000008632) #12	LRRN2 (ENSSCUG00000008631)	NFASC (ENSSCUG00000008077) #13	CNTN2 (ENSSCUG00000007774) #14	TMEM81 (ENSSCUG00000007773) #15	RBBP5 (ENSSCUG00000007771) #16	DSTYK (ENSSCUG00000007753) #17	TMCC2 (ENSSCUG00000007732) #18	KLHDC8A (ENSSCUG00000007731) #20	ENSSCUG00000007728	CDK18 (ENSSCUG00000007725) #22	MFSD4A (ENSSCUG00000007722) #23	ELK4 (ENSSCUG00000007721) #24	ENSSCUG00000007719	SLC45A3 (ENSSCUG00000007717) #25	NUCKS1 (ENSSCUG00000007713) #26	RAB29 (ENSSCUG00000007710) #27	SLC41A1 (ENSSCUG00000007708) #28	PM20D1 (ENSSCUG00000007695) #29	SLC26A9 (ENSSCUG00000007688) #30	RAB7B (ENSSCUG00000007685) #31	CTSE (ENSSCUG00000007683) #32	ENSSCUG00000007682 #35	ENSSCUG00000007677 #36	ENSSCUG00000007673 #37	RASSF5 (ENSSCUG00000007667)
Australian saltwater crocodile	MODERN SPECIES	53	GOLT1A (ENSCPRG00005010937) #8	PLEKHA6 (ENSCPRG00005010644) #9	PIK3C2B (ENSCPRG00005010571) #11	ENSCPRG00005010568 #12	ENSCPRG00005010565 #12	ENSCPRG00005010563 #12	LRRN2 (ENSCPRG00005010562)	ENSCPRG00005010556	NFASC (ENSCPRG00005010546) #13	CNTN2 (ENSCPRG00005010532) #14	RBBP5 (ENSCPRG00005010522) #16	DSTYK (ENSCPRG00005010402) #17	TMCC2 (ENSCPRG00005010382) #18	NUAK2 (ENSCPRG00005010378) #19	ENSCPRG00005010358 #20	CDK18 (ENSCPRG00005010337) #22	MFSD4A (ENSCPRG00005010329) #23	ELK4 (ENSCPRG00005010318) #24	ENSCPRG00005010316	SLC45A3 (ENSCPRG00005010312) #25	NUCKS1 (ENSCPRG00005010304) #26	RAB29 (ENSCPRG00005010297) #27	SLC41A1 (ENSCPRG00005010290) #28	PM20D1 (ENSCPRG00005010266) #29	SLC26A9 (ENSCPRG00005010250) #30	RAB7B (ENSCPRG00005010244) #31	CTSE (ENSCPRG00005010189) #32	ENSCPRG00005010172	AVPR1B (ENSCPRG00005010166) #34	ENSCPRG00005010162 #35	ENSCPRG00005008508 #36
Anura	ANCESTRAL SPECIES	284											ENSGT00840000129948 #17	ENSGT00940000158314 #18	ENSGT00940000158422.a #19	ENSGT00940000160742 #20	ENSGT00940000154098.b ##21	ENSGT00940000159482 #22	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000012353	ENSLLEG00000012384	ENSLLEG00000012498	C1orf116 (ENSLLEG00000013164)	YOD1 (ENSLLEG00000000057)	PFKFB2 (ENSLLEG00000000114)	ENSLLEG00000000336	ENSLLEG00000000454	DSTYK (ENSLLEG00000000488) #17	TMCC2 (ENSLLEG00000000610) #18	NUAK2 (ENSLLEG00000000659) #19	KLHDC8A (ENSLLEG00000000686) #20	ENSLLEG00000000732 ##21	ENSLLEG00000000774	ENSLLEG00000000783	CDK18 (ENSLLEG00000000794) #22	MFSD4A (ENSLLEG00000001009) #23	ENSLLEG00000001035	ELK4 (ENSLLEG00000001044) #24	ENSLLEG00000001066	ENSLLEG00000001069	SLC45A3 (ENSLLEG00000001078) #25	ENSLLEG00000001088	NUCKS1 (ENSLLEG00000001102) #26	RAB29 (ENSLLEG00000001126) #27	SLC41A1 (ENSLLEG00000001142) #28	GGNBP2 (ENSLLEG00000001180)	PIGW (ENSLLEG00000001206)	MYO19 (ENSLLEG00000001213)	ZNHIT3 (ENSLLEG00000001287)	DCAF6 (ENSLLEG00000001357)
Frog	MODERN SPECIES	2	ube2t (ENSXETG00000035755)	rbbp5 (ENSXETG00000000933) #16	gpr37l1 (ENSXETG00000033722)	elf3 (ENSXETG00000031510)	rnpep (ENSXETG00000000963)	ENSXETG00000042028	ENSXETG00000045272	mpc2 (ENSXETG00000025716)	dcaf6 (ENSXETG00000000972)	znhit3 (ENSXETG00000025713)	tmcc2 (ENSXETG00000000973) #18	nuak2 (ENSXETG00000000974) #19	klhdc8a (ENSXETG00000000976) #20	lemd1 (ENSXETG00000033482) ##21	ENSXETG00000041249	cdk18 (ENSXETG00000000980) #22	mfsd4a (ENSXETG00000000985) #23	elk4 (ENSXETG00000000987) #24	klf15.2 (ENSXETG00000000992)	slc45a3 (ENSXETG00000000993) #25	nucks1 (ENSXETG00000035501) #27	slc41a1 (ENSXETG00000040543) #28	ENSXETG00000047513	pm20d1 (ENSXETG00000005950) #29	slc26a9 (ENSXETG00000005947) #30	rab7b (ENSXETG00000005944) #31	ctse (ENSXETG00000005932) #32	ENSXETG00000042916	avpr1b (ENSXETG00000005930) #34	ENSXETG00000048832	fam72a (ENSXETG00000024988) #35
Coelacanth	MODERN SPECIES	260	PLEKHA6 (ENSLACG00000017839) #9	PPP1R15B (ENSLACG00000022281) #10	PIK3C2B (ENSLACG00000017407) #11	MDM4 (ENSLACG00000017268) #12	LRRN2 (ENSLACG00000017103)	NFASC (ENSLACG00000014868) #13	CNTN2 (ENSLACG00000013846) #14	tpk2 (ENSLACG00000013583)	TMEM81 (ENSLACG00000013273) #15	RBBP5 (ENSLACG00000013020) #16	DSTYK (ENSLACG00000012242) #17	TMCC2 (ENSLACG00000010448) #18	NUAK2 (ENSLACG00000009120) #19	KLHDC8A (ENSLACG00000008787) #20	ENSLACG00000022635 ##21	CDK18 (ENSLACG00000002862) #22	MFSD4A (ENSLACG00000001438) #23
Actinopterygii	ANCESTRAL SPECIES	40											ENSGT00920000149095	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT01030000235220	ENSGT00940000166776	ENSGT00940000154098.b ##21	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000155036	ENSGT00940000162710	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161	ENSGT00940000158860	ENSGT00940000156542
Reedfish	MODERN SPECIES	11	tram2 (ENSECRG00000004545)	efhc1 (ENSECRG00000004482)	ENSECRG00000004440	slc35b2 (ENSECRG00000004423)	SCARA5 (ENSECRG00000004258)	pbk (ENSECRG00000004212)	ESCO2 (ENSECRG00000004198)	ccdc25 (ENSECRG00000004191)	zc3h11a (ENSECRG00000004174)	snrpe (ENSECRG00000004163)	sox13 (ENSECRG00000004143)	etnk2 (ENSECRG00000004125)	ENSECRG00000004115	ENSECRG00000004107	ENSECRG00000004096 ##21	CDK18 (ENSECRG00000004084) #22	mfsd4ab (ENSECRG00000004076) #23	elk4 (ENSECRG00000004068) #24	ENSECRG00000004064	slc45a3 (ENSECRG00000004056) #25	nucks1a (ENSECRG00000004047) #26	ENSECRG00000004035	ENSECRG00000004027	ENSECRG00000004024	ENSECRG00000004017	ENSECRG00000004007	ENSECRG00000003995	ENSECRG00000003991	ENSECRG00000003799	ENSECRG00000003723	ENSECRG00000002668
Neopterygii	ANCESTRAL SPECIES	204					ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024 #13	ENSGT00940000164703.a	ENSGT00920000149095	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00950000183042.a.a #28	ENSGT00940000156659 #29	ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT01030000235220	ENSGT00940000166776	ENSGT00940000154098.b ##21	ENSGT00530000063320.A #23	ENSGT00940000158900 #24	ENSGT00940000166195
Spotted gar	MODERN SPECIES	669	mdm4 (ENSLOCG00000012014) #12	LRRN2 (ENSLOCG00000017941)	nfasca (ENSLOCG00000011984) #13	cntn2 (ENSLOCG00000011962)	ENSLOCG00000011946	ENSLOCG00000011937	zc3h11a (ENSLOCG00000011932)	snrpe (ENSLOCG00000011927)	sox13 (ENSLOCG00000011918)	etnk2 (ENSLOCG00000011908)	ENSLOCG00000011898	slc41a1 (ENSLOCG00000011890) #28	pm20d1.2 (ENSLOCG00000011875) #29	ENSLOCG00000011868	lemd1 (ENSLOCG00000011858) ##21	CDK18 (ENSLOCG00000011838) #22	mfsd4ab (ENSLOCG00000011823) #23	elk4 (ENSLOCG00000011817) #24	ENSLOCG00000011807	slc45a3 (ENSLOCG00000011802) #25	nucks1a (ENSLOCG00000011797) #26	ENSLOCG00000011788	ENSLOCG00000011777	ENSLOCG00000011772	ENSLOCG00000011766	ENSLOCG00000011758	ENSLOCG00000011751	ENSLOCG00000011744	ENSLOCG00000011734	ENSLOCG00000011725	prok1 (ENSLOCG00000011719)
Osteoglossocephalai	ANCESTRAL SPECIES	80	ENSGT00390000015805.a	ENSGT00940000157574	ENSGT00940000154527.a.a.a	ENSGT00530000063539.a #12	ENSGT00940000161204	ENSGT00940000157024.k.a #13	ENSGT00940000164703.a	ENSGT00920000149095	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT01030000235220	ENSGT00940000163561	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000165186.C	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000153675.a.b	ENSGT00940000153675.a.a.a.b	ENSGT00940000159654
Osteoglossiformes	ANCESTRAL SPECIES	192									ENSGT00940000164703.a.g	ENSGT00920000149095	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000157821.h.b	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000165186.C.b	ENSGT00940000158624.a	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000153675.a.a.a.b	ENSGT00940000159654.`b
Asian bonytongue	MODERN SPECIES	11	mdm4 (ENSSFOG00015001112) #12	LRRN2 (ENSSFOG00015001169)	nfasca (ENSSFOG00015001176) #13	cntn2 (ENSSFOG00015001228)	chia.1 (ENSSFOG00015001246)	chia.1 (ENSSFOG00015001367)	chia.3 (ENSSFOG00015001416)	ENSSFOG00015001467	zc3h11a (ENSSFOG00015001481)	snrpe (ENSSFOG00015001485)	sox13 (ENSSFOG00015026016)	etnk2 (ENSSFOG00015032878)	ENSSFOG00015001589	slc41a1 (ENSSFOG00015001594) #28	ENSSFOG00015001642	CDK18 (ENSSFOG00015001646) #22	mfsd4aa (ENSSFOG00015001682) #23	elk4 (ENSSFOG00015001742) #24	ENSSFOG00015001760	slc45a3 (ENSSFOG00015001773) #25	nucks1a (ENSSFOG00015024257) #26	ENSSFOG00015001835	ENSSFOG00015001839	cldn19 (ENSSFOG00015001862)	P3H1 (ENSSFOG00015001878)	zgc:112255 (ENSSFOG00015027967)	ap5b1 (ENSSFOG00015001933)	CDC42 (ENSSFOG00015030768)	wnt4 (ENSSFOG00015026920)	svbp (ENSSFOG00015032649)	ENSSFOG00015028678
P. kingsleyae	MODERN SPECIES	677																CDK18 (ENSPKIG00000000441) #22	ENSPKIG00000000387	mfsd4aa (ENSPKIG00000000378) #23
Clupeocephala	ANCESTRAL SPECIES	172	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00940000157024.k.a #13	ENSGT00940000164703.a	ENSGT00940000161149	ENSGT00940000162989.e	ENSGT00940000162989.f.a.a	ENSGT00920000149095	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT01030000235220	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00940000178268	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000153675.a.b.a	ENSGT00940000153675.a.a.a.b	ENSGT00940000159654	ENSGT00390000006113
Euteleosteomorpha	ANCESTRAL SPECIES	24	ENSGT00940000158192	ENSGT00940000155203.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.b	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT01030000235220	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721
Acanthomorphata	ANCESTRAL SPECIES	42					ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.b	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00940000163561	ENSGT00950000183014.f.b.a.b	ENSGT00390000008330
Euacanthomorphacea	ANCESTRAL SPECIES	1	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00940000153675.a.a.b	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00940000163561	ENSGT00950000183014.f.b.a.b	ENSGT00390000008330
Percomorphaceae	ANCESTRAL SPECIES	1	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00950000182977.A.i.a	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00940000163561	ENSGT00950000183014.f.b.a.b	ENSGT00390000008330	ENSGT00940000157312
Percomorphaceae_B	ANCESTRAL SPECIES	3	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00940000159408.v	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00950000183014.f.b.a.b	ENSGT00390000008330
Ovalentaria	ANCESTRAL SPECIES	2	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00940000159408.v	ENSGT00940000153675.a.b.b	ENSGT00950000182977.A.i.a	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330	ENSGT00940000157312
Atherinomorphae	ANCESTRAL SPECIES	2	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00950000183014.f.b.a.b	ENSGT00940000157312	ENSGT00940000156915.f.b
Cyprinodontiformes	ANCESTRAL SPECIES	2	ENSGT00950000183042.b.b ##28	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725
Aplocheiloidei	ANCESTRAL SPECIES	301																ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26
Mangrove rivulus	MODERN SPECIES	586																CDK18 (ENSKMAG00000004855) #22	mfsd4aa (ENSKMAG00000004918) #23
Turquoise killifish	MODERN SPECIES	482																ENSNFUG00015020253 #22
Cyprinodontoidei	ANCESTRAL SPECIES	4	ENSGT00950000183042.b.b ##28	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725
NAME_4	ANCESTRAL SPECIES	424															ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195
Mummichog	MODERN SPECIES	759																CDK18 (ENSFHEG00000016156) #22	ENSFHEG00000016161	mfsd4aa (ENSFHEG00000016169) #23	elk4 (ENSFHEG00000016179) #24	ENSFHEG00000016183
Sheepshead minnow	MODERN SPECIES	1294															ENSCVAG00000004331	CDK18 (ENSCVAG00000004320) #22	mfsd4aa (ENSCVAG00000004295) #23	elk4 (ENSCVAG00000000121) #24
Poeciliinae	ANCESTRAL SPECIES	4	ENSGT00940000161154.a	ENSGT00940000164249.b.a.b.a.a.d.a.b	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00940000158955	ENSGT00940000156407	ENSGT00940000162989.f.a.a.a	ENSGT00940000162989.e	ENSGT00940000164703.a	ENSGT00940000157024.k.a #13	ENSGT01100000263491.a.b.a.a.b.a	ENSGT00920000149095
Poecilia	ANCESTRAL SPECIES	54	ENSGT00940000161154.a	ENSGT00940000164249.b.a.b.a.a.d.a.b	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00940000158955	ENSGT00940000156407	ENSGT00940000162989.f.a.a.a	ENSGT00940000161149	ENSGT00940000164703.a	ENSGT00940000157024.k.a #13	ENSGT01100000263491.a.b.a.a.b.a	ENSGT00920000149095
NAME_6	ANCESTRAL SPECIES	320																ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00940000158955	ENSGT00940000156407	ENSGT00940000162989.f.a.a.a	ENSGT00940000161149	ENSGT00940000164703.a	ENSGT00940000157024.k.a #13
Sailfin molly	MODERN SPECIES	1500																CDK18 (ENSPLAG00000022033) #22	mfsd4aa (ENSPLAG00000021973) #23	elk4 (ENSPLAG00000021966) #24	ENSPLAG00000021956	nucks1a (ENSPLAG00000021944) #26
Amazon molly	MODERN SPECIES	497																CDK18 (ENSPFOG00000001851) #22	mfsd4aa (ENSPFOG00000002287) #23	elk4 (ENSPFOG00000002423) #24	ENSPFOG00000002472	nucks1a (ENSPFOG00000002478) #26	ENSPFOG00000002611	cldn19 (ENSPFOG00000003145)	P3H1 (ENSPFOG00000003235)	ENSPFOG00000003692	arfrp1 (ENSPFOG00000003764)	chia.3 (ENSPFOG00000003833)
Guppy	MODERN SPECIES	457	zgc:113019 (ENSPREG00000017784)	txnrd3 (ENSPREG00000017798)	bin2b (ENSPREG00000017851)	ITGA5 (ENSPREG00000017878)	fbxo2 (ENSPREG00000017906)	svbp (ENSPREG00000017919)	wnt4 (ENSPREG00000018004)	ENSPREG00000018016	ENSPREG00000018027	snrpe (ENSPREG00000018043)	sox13 (ENSPREG00000018056)	etnk2 (ENSPREG00000018069)	ENSPREG00000018085	slc41a1 (ENSPREG00000018099) #28	ENSPREG00000018123	CDK18 (ENSPREG00000018155) #22	mfsd4aa (ENSPREG00000018191) #23	elk4 (ENSPREG00000018223) #24	ENSPREG00000018235	nucks1a (ENSPREG00000018246) #26	ENSPREG00000018454	cldn19 (ENSPREG00000019489)	P3H1 (ENSPREG00000019520)	ENSPREG00000019601	arfrp1 (ENSPREG00000019667)	chia.3 (ENSPREG00000019691)	chia.1 (ENSPREG00000019714)	cntn2 (ENSPREG00000019761)	nfasca (ENSPREG00000019860) #13	ENSPREG00000020117	zc3h11a (ENSPREG00000020129)
Platyfish	MODERN SPECIES	12					wnt4 (ENSXMAG00000008829)	cdc42 (ENSXMAG00000025804)	snrpe (ENSXMAG00000008850)	sox13 (ENSXMAG00000008855)	etnk2 (ENSXMAG00000027899)	tmem147 (ENSXMAG00000008883)	ENSXMAG00000008887	slc41a1 (ENSXMAG00000023299) #28	ENSXMAG00000025621	ENSXMAG00000028902	ENSXMAG00000026666	CDK18 (ENSXMAG00000009255) #22	mfsd4aa (ENSXMAG00000000654) #23	elk4 (ENSXMAG00000022306) #24	ENSXMAG00000029523	nucks1a (ENSXMAG00000002556) #26	ENSXMAG00000002557	cldn19 (ENSXMAG00000002600)	P3H1 (ENSXMAG00000002601)	ENSXMAG00000002625	arfrp1 (ENSXMAG00000002627)	chia.3 (ENSXMAG00000002634)	ENSXMAG00000002651	ENSXMAG00000028011	cntn2 (ENSXMAG00000002652)	nfasca (ENSXMAG00000002662) #13	ENSXMAG00000004765
Oryzias	ANCESTRAL SPECIES	1	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929.h	ENSGT00940000160929.g	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776.d	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000162663	ENSGT00940000155071.C	ENSGT00940000177280	ENSGT00940000158384.d	ENSGT00530000063548.A	ENSGT00940000154861.n.a
Oryzias_a	ANCESTRAL SPECIES	5	ENSGT00950000183042.b.b ##28	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929.h	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776.d	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000162663	ENSGT00940000155071.C	ENSGT00940000177280	ENSGT00940000158384.d	ENSGT00530000063548.A	ENSGT00940000154861.n.a
Chinese medaka	MODERN SPECIES	509	ENSOSIG00000010975 ##28	CHST13 (ENSOSIG00000010974)	txnrd3 (ENSOSIG00000008462)	bin2b (ENSOSIG00000008435)	fbxo2 (ENSOSIG00000008397)	KLHL10 (ENSOSIG00000008389)	wnt4 (ENSOSIG00000008385)	cdc42 (ENSOSIG00000008383)	snrpe (ENSOSIG00000008381)	sox13 (ENSOSIG00000008379)	ENSOSIG00000008373	etnk2 (ENSOSIG00000008371)	ENSOSIG00000008370	slc41a1 (ENSOSIG00000007175) #28	ENSOSIG00000007162	CDK18 (ENSOSIG00000003924) #22	mfsd4aa (ENSOSIG00000003731) #23	elk4 (ENSOSIG00000020211) #24	nucks1a (ENSOSIG00000020208) #26	ENSOSIG00000020205	cldn19 (ENSOSIG00000020199)	P3H1 (ENSOSIG00000020192)	zgc:112255 (ENSOSIG00000020187)	ap5b1 (ENSOSIG00000020185)	setmar (ENSOSIG00000020182)	ENSOSIG00000020179	bhlhe40 (ENSOSIG00000020159)	ENSOSIG00000020158	arl8bb (ENSOSIG00000020153)	ENSOSIG00000020148	pmepa1 (ENSOSIG00000020145)
Japanese Medaka HdrR	MODERN SPECIES	19	CHST13 (ENSORLG00000030452)	txnrd3 (ENSORLG00000011831)	ENSORLG00000011869	ENSORLG00000011967	fbxo2 (ENSORLG00000011982)	svbp (ENSORLG00000022003)	ENSORLG00000026354	wnt4 (ENSORLG00000012025)	cdc42 (ENSORLG00000012048)	snrpe (ENSORLG00000012059)	sox13 (ENSORLG00000012066)	etnk2 (ENSORLG00000012080)	ENSORLG00000023213	slc41a1 (ENSORLG00000023129) #28	ENSORLG00000012126	CDK18 (ENSORLG00000012176) #22	mfsd4aa (ENSORLG00000012208) #23	elk4 (ENSORLG00000012230) #24	ENSORLG00000012237	ENSORLG00000024522	nucks1a (ENSORLG00000012276) #26	ENSORLG00000012405	cldn19 (ENSORLG00000012418)	P3H1 (ENSORLG00000012560)	zgc:112255 (ENSORLG00000012573)	ap5b1 (ENSORLG00000012579)	setmar (ENSORLG00000028716)	ITPR1 (ENSORLG00000012718)	ENSORLG00000030408	dec1a (ENSORLG00000022966)	ENSORLG00000012763
Oryzias_b	ANCESTRAL SPECIES	3	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929.h	ENSGT00940000160929.g	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776.d	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000162663	ENSGT00940000155071.C	ENSGT00940000177280	ENSGT00940000158384.d	ENSGT00530000063548.A	ENSGT00940000154861.n.a
Javanese ricefish	MODERN SPECIES	19	txnrd3 (ENSOJAG00000019737)	bin2b (ENSOJAG00000019718)	ITGA5 (ENSOJAG00000019542)	fbxo2 (ENSOJAG00000019527)	fbxo2 (ENSOJAG00000019519)	ENSOJAG00000019510	svbp (ENSOJAG00000019492)	wnt4 (ENSOJAG00000019386)	cdc42 (ENSOJAG00000019366)	sox13 (ENSOJAG00000019349)	snrpe (ENSOJAG00000019313)	etnk2 (ENSOJAG00000019286)	ENSOJAG00000019277	slc41a1 (ENSOJAG00000019098) #28	ENSOJAG00000019072	CDK18 (ENSOJAG00000017842) #22	mfsd4aa (ENSOJAG00000017730) #23	elk4 (ENSOJAG00000017722) #24	ENSOJAG00000017714	nucks1a (ENSOJAG00000017702) #26	ENSOJAG00000017693	ENSOJAG00000017678	ENSOJAG00000017462	cldn19 (ENSOJAG00000017442)	P3H1 (ENSOJAG00000017248)	zgc:112255 (ENSOJAG00000017233)	ap5b1 (ENSOJAG00000017227)	setmar (ENSOJAG00000017222)	ENSOJAG00000017208	bhlhe40 (ENSOJAG00000016468)	NAAA (ENSOJAG00000016452)
Indian medaka	MODERN SPECIES	8	ENSOMEG00000023918	LSM14B (ENSOMEG00000023917)	ENSOMEG00000023916	ENSOMEG00000023915	bmp7a (ENSOMEG00000023914)	rae1 (ENSOMEG00000023913)	RBM38 (ENSOMEG00000023912)	tada3l (ENSOMEG00000023911)	arpc4 (ENSOMEG00000023910)	pfkfb4a (ENSOMEG00000023909)	mapkapk3 (ENSOMEG00000023908)	rpp14 (ENSOMEG00000023907)	HTD2 (ENSOMEG00000023906)	isy1 (ENSOMEG00000023905)	CFAP57 (ENSOMEG00000023904)	CDK18 (ENSOMEG00000023903) #22	MFSD4A (ENSOMEG00000023902) #23	elk4 (ENSOMEG00000023901) #24	ENSOMEG00000023900	acad9 (ENSOMEG00000023899)	pltp (ENSOMEG00000023898)	khk (ENSOMEG00000023897)	ddx27 (ENSOMEG00000023896)	KCNQ2 (ENSOMEG00000023895)	ENSOMEG00000023892	phf2 (ENSOMEG00000023889)	barx1 (ENSOMEG00000023887)	ptpdc1a (ENSOMEG00000023885)	wnt7aa (ENSOMEG00000023884)	FBLN2 (ENSOMEG00000023883)	ENSOMEG00000023881
Ovalentaria_B	ANCESTRAL SPECIES	5	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.b.b	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330	ENSGT00940000157312
Cichlidae	ANCESTRAL SPECIES	1	ENSGT00950000183042.b.b ##28	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330
Pseudocrenilabrinae	ANCESTRAL SPECIES	4	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00390000017595.t.b	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330
Nile tilapia	MODERN SPECIES	17	hdac11 (ENSONIG00000003256)	ENSONIG00000029084	IQSEC1 (ENSONIG00000003259)	ENSONIG00000042024	ENSONIG00000041657	acad9 (ENSONIG00000003265)	ENSONIG00000003275	ENSONIG00000003277	ENSONIG00000003279	slc41a1 (ENSONIG00000003282) #28	ENSONIG00000003284	ENSONIG00000033009	ENSONIG00000006905	ENSONIG00000031663	ENSONIG00000037442	CDK18 (ENSONIG00000003295) #22	ENSONIG00000027528	mfsd4aa (ENSONIG00000003299) #23	elk4 (ENSONIG00000003304) #24	ENSONIG00000036664	slc45a3 (ENSONIG00000003305) #25	ENSONIG00000036042	nucks1 (ENSONIG00000003308) #26	ENSONIG00000003310	ENSONIG00000042489	ENSONIG00000041546	cldn19 (ENSONIG00000003346)	P3H1 (ENSONIG00000003352)	zgc:112255 (ENSONIG00000003359)	ap5b1 (ENSONIG00000003364)	nuf2 (ENSONIG00000037664)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	2	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00390000017595.t.b	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330
Haplochromini	ANCESTRAL SPECIES	1	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00390000017595.t.b	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330
Burton s mouthbrooder	MODERN SPECIES	441															GRID1 (ENSHBUG00000002795)	CDK18 (ENSHBUG00000001096) #22	mfsd4aa (ENSHBUG00000000054) #23	elk4 (ENSHBUG00000000052) #24	ENSHBUG00000002719	slc45a3 (ENSHBUG00000002687) #25	nucks1a (ENSHBUG00000002677) #26	ENSHBUG00000023774	cldn19 (ENSHBUG00000023706)	P3H1 (ENSHBUG00000023670)	zgc:112255 (ENSHBUG00000023664)	ap5b1 (ENSHBUG00000023657)	nuf2 (ENSHBUG00000023644)	CFAP57 (ENSHBUG00000000717)	ENSHBUG00000023495	ENSHBUG00000023478	ENSHBUG00000023468
Haplochromini_A	ANCESTRAL SPECIES		ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00390000017595.t.b	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330
Haplochromini_B	ANCESTRAL SPECIES		ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00390000017595.t.b	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330	ENSGT00940000157312
Zebra mbuna	MODERN SPECIES	1108	CHST13 (ENSMZEG00005007976)	txnrd3 (ENSMZEG00005007952)	bin2b (ENSMZEG00005007927)	ITGA5 (ENSMZEG00005007903)	fbxo2 (ENSMZEG00005007887)	svbp (ENSMZEG00005007878)	wnt4 (ENSMZEG00005007869)	cdc42 (ENSMZEG00005007846)	snrpe (ENSMZEG00005007826)	ENSMZEG00005007799	sox13 (ENSMZEG00005007783)	etnk2 (ENSMZEG00005007765)	ENSMZEG00005007752	slc41a1 (ENSMZEG00005007711) #28	ENSMZEG00005007689	CDK18 (ENSMZEG00005007662) #22	mfsd4aa (ENSMZEG00005007630) #23	elk4 (ENSMZEG00005007620) #24	ENSMZEG00005007594	slc45a3 (ENSMZEG00005007546) #25	nucks1a (ENSMZEG00005007526) #26	ENSMZEG00005007455	cldn19 (ENSMZEG00005007433)	P3H1 (ENSMZEG00005007416)	zgc:112255 (ENSMZEG00005007398)	ap5b1 (ENSMZEG00005007391)	nuf2 (ENSMZEG00005007350)	ENSMZEG00005007294	CFAP57 (ENSMZEG00005007180)	ENSMZEG00005007148	ENSMZEG00005007112
Eastern happy	MODERN SPECIES	17	CHST13 (ENSACLG00000024517)	txnrd3 (ENSACLG00000024528)	bin2b (ENSACLG00000024591)	ITGA5 (ENSACLG00000024659)	fbxo2 (ENSACLG00000024705)	svbp (ENSACLG00000024715)	wnt4 (ENSACLG00000024745)	CDC42 (ENSACLG00000024752)	snrpe (ENSACLG00000024766)	ENSACLG00000024781	sox13 (ENSACLG00000024986)	etnk2 (ENSACLG00000025006)	ENSACLG00000025017	slc41a1 (ENSACLG00000025035) #28	ENSACLG00000025075	CDK18 (ENSACLG00000025126) #22	mfsd4aa (ENSACLG00000025203) #23	elk4 (ENSACLG00000025248) #24	ENSACLG00000025252	slc45a3 (ENSACLG00000025273) #25	nucks1a (ENSACLG00000025316) #26	ENSACLG00000025337	ENSACLG00000025343	ENSACLG00000025366	cldn19 (ENSACLG00000025434)	ap5b1 (ENSACLG00000025453)	zgc:112255 (ENSACLG00000025468)	nuf2 (ENSACLG00000025472)	CFAP57 (ENSACLG00000025502)	ENSACLG00000025618	ENSACLG00000025620
P. nyererei	MODERN SPECIES	316	CHST13 (ENSPNYG00000005212)	txnrd3 (ENSPNYG00000005228)	bin2b (ENSPNYG00000005244)	ITGA5 (ENSPNYG00000005301)	fbxo2 (ENSPNYG00000005518)	svbp (ENSPNYG00000005526)	wnt4 (ENSPNYG00000005539)	cdc42 (ENSPNYG00000005558)	snrpe (ENSPNYG00000005592)	ENSPNYG00000005618	sox13 (ENSPNYG00000005686)	etnk2 (ENSPNYG00000005727)	ENSPNYG00000005756	slc41a1 (ENSPNYG00000005783) #28	ENSPNYG00000005830	CDK18 (ENSPNYG00000005903) #22	ENSPNYG00000005993	mfsd4aa (ENSPNYG00000006012) #23	elk4 (ENSPNYG00000006035) #24	ENSPNYG00000006047	slc45a3 (ENSPNYG00000006067) #25	nucks1a (ENSPNYG00000006138) #26	ENSPNYG00000006198	cldn19 (ENSPNYG00000006243)	P3H1 (ENSPNYG00000006270)	zgc:112255 (ENSPNYG00000006307)	ap5b1 (ENSPNYG00000006339)	ENSPNYG00000006348	ENSPNYG00000006359	ENSPNYG00000006375	ENSPNYG00000006402
Lyretail cichlid	MODERN SPECIES	359	phactr3b (ENSNBRG00000014744)	PPP1R3D (ENSNBRG00000014788)	SLC41A3 (ENSNBRG00000014812) ##28	CHST13 (ENSNBRG00000014836)	txnrd3 (ENSNBRG00000014870)	bin2b (ENSNBRG00000015031)	ENSNBRG00000015053	fbxo2 (ENSNBRG00000015074)	wnt4 (ENSNBRG00000015154)	cdc42 (ENSNBRG00000015440)	snrpe (ENSNBRG00000015473)	PBLD (ENSNBRG00000015524)	sox13 (ENSNBRG00000015731)	etnk2 (ENSNBRG00000015766)	slc41a1 (ENSNBRG00000015812) #28	CDK18 (ENSNBRG00000015969) #22	mfsd4aa (ENSNBRG00000015994) #23	ENSNBRG00000016041 #24	ENSNBRG00000016051	slc45a3 (ENSNBRG00000016066) #25	nucks1a (ENSNBRG00000016090) #26	ENSNBRG00000016269	cldn19 (ENSNBRG00000016946)	P3H1 (ENSNBRG00000016977)	zgc:112255 (ENSNBRG00000017042)	ap5b1 (ENSNBRG00000017085)	nuf2 (ENSNBRG00000017112)	CFAP57 (ENSNBRG00000017180)	ENSNBRG00000017275	ENSNBRG00000017298	acad9 (ENSNBRG00000017329)
Midas cichlid	MODERN SPECIES	169													ENSACIG00000024220	slc41a1 (ENSACIG00000024225) #28	ENSACIG00000024230	CDK18 (ENSACIG00000024236) #22	mfsd4aa (ENSACIG00000024242) #23	elk4 (ENSACIG00000024250) #24	ENSACIG00000024253	slc45a3 (ENSACIG00000024254) #25	nucks1a (ENSACIG00000000205) #26	ENSACIG00000000232	cldn19 (ENSACIG00000000299)	P3H1 (ENSACIG00000000341)	zgc:112255 (ENSACIG00000000382)	ap5b1 (ENSACIG00000000491)	nuf2 (ENSACIG00000000506)	CFAP57 (ENSACIG00000000595)	ENSACIG00000000764	ENSACIG00000000794	acad9 (ENSACIG00000000819)
Pomacentridae	ANCESTRAL SPECIES	33	ENSGT00390000018852	ENSGT00990000203541.a.b.b.e.a	ENSGT00940000157446	ENSGT00940000165995	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00740000115534.b	ENSGT00940000154491.d.b	ENSGT00940000161320.f.b	ENSGT00390000004215.a.b.a	ENSGT00940000159430	ENSGT00390000012914	ENSGT00940000178369	ENSGT00990000204514	ENSGT01030000234623.a.a.a.a.a	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721
Pomacentridae_A	ANCESTRAL SPECIES	2	ENSGT00990000203541.a.b.b.e.a	ENSGT00940000157446	ENSGT00940000165995	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00740000115534.b	ENSGT00940000154491.d.b	ENSGT00940000161320.f.b	ENSGT00940000163969.C	ENSGT00390000004215.a.b.a	ENSGT00940000159430	ENSGT00390000012914	ENSGT00940000178369	ENSGT00990000204514	ENSGT01030000234623.a.a.a.a.a	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721
Amphiprion	ANCESTRAL SPECIES	100	ENSGT00990000203541.a.b.b.e.a	ENSGT00940000157446	ENSGT00940000165995	ENSGT01020000230394.e.a.a.b.a.a.b.a.a	ENSGT00740000115534.b	ENSGT00940000154491.d.b	ENSGT00940000161320.f.b	ENSGT00940000163969.C	ENSGT00390000004215.a.b.a	ENSGT00940000159430	ENSGT00390000012914	ENSGT00990000204608	ENSGT00990000204514	ENSGT01030000234623.a.a.a.a.a	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000154258.a
Orange clownfish	MODERN SPECIES	20	ENSAPEG00000017214	ENSAPEG00000017298	ENSAPEG00000017347	ENSAPEG00000017387	ENSAPEG00000017402	tcf15 (ENSAPEG00000017431)	ENSAPEG00000017440	ENSAPEG00000017478	slc2a10 (ENSAPEG00000017524)	tp53rk (ENSAPEG00000017566)	ENSAPEG00000017578	SERINC3 (ENSAPEG00000017596)	ENSAPEG00000017630	ENSAPEG00000017687	ENSAPEG00000017705	CDK18 (ENSAPEG00000017763) #22	mfsd4aa (ENSAPEG00000017814) #23	elk4 (ENSAPEG00000017829) #24	ENSAPEG00000017858	nucks1a (ENSAPEG00000017879) #26	ENSAPEG00000017973	cldn19 (ENSAPEG00000018030)	P3H1 (ENSAPEG00000018038)	zgc:112255 (ENSAPEG00000018079)	ap5b1 (ENSAPEG00000018086)	ENSAPEG00000018122	ahcy (ENSAPEG00000018141)	CHMP4B (ENSAPEG00000018195)	ENSAPEG00000018212	rspo4 (ENSAPEG00000018234)	PTPRT (ENSAPEG00000018305)
Clown anemonefish	MODERN SPECIES	2303		ENSAOCG00000010139	si:dkey-19e4.5 (ENSAOCG00000000622)	ENSAOCG00000010053	ENSAOCG00000009860	ENSAOCG00000009600	tcf15 (ENSAOCG00000002817)	ENSAOCG00000009561	slc2a10 (ENSAOCG00000009490)	ENSAOCG00000009440	tp53rk (ENSAOCG00000009426)	ENSAOCG00000009417	SERINC3 (ENSAOCG00000000569)	ENSAOCG00000009360	ENSAOCG00000009331	CDK18 (ENSAOCG00000009304) #22	mfsd4aa (ENSAOCG00000009251) #23	elk4 (ENSAOCG00000009162) #24	ENSAOCG00000000562	nucks1a (ENSAOCG00000009140) #26	ENSAOCG00000009102	ENSAOCG00000009056
Spiny chromis	MODERN SPECIES	1138											PURA (ENSAPOG00000007645)	PSD2 (ENSAPOG00000007702)	ENSAPOG00000007712	ENSAPOG00000007732	zgc:110843 (ENSAPOG00000007748)	CDK18 (ENSAPOG00000007821) #22
Bicolor damselfish	MODERN SPECIES	2294																CDK18 (ENSSPAG00000006925) #22	ENSSPAG00000006956	MFSD4A (ENSSPAG00000006965) #23
Percomorphaceae_C	ANCESTRAL SPECIES	1	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT01060000248756	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330	ENSGT00940000157312	ENSGT00940000156915.f.b
Eupercaria	ANCESTRAL SPECIES		ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT01060000248756	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00950000183014.f.b.a.b	ENSGT00390000008330	ENSGT00940000157312
Tetraodontidae	ANCESTRAL SPECIES	1	ENSGT00950000183042.b.b ##28	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266.g	ENSGT00940000156266.h	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00950000183014.f.b.a.b	ENSGT00940000157312	ENSGT00940000156915.f.b
Tetraodon	MODERN SPECIES	2	ENSTNIG00000007364 ##34	acot8 (ENSTNIG00000007365)	phactr3b (ENSTNIG00000007366)	ENSTNIG00000007367 ##28	CHST13 (ENSTNIG00000007368)	txnrd3 (ENSTNIG00000007369)	bin2b (ENSTNIG00000007370)	wnt4 (ENSTNIG00000007371)	CDC42 (ENSTNIG00000007372)	snrpe (ENSTNIG00000007373)	sox13 (ENSTNIG00000007374)	etnk2 (ENSTNIG00000007375)	ENSTNIG00000007376	slc41a1 (ENSTNIG00000007377) #28	ENSTNIG00000007378	CDK18 (ENSTNIG00000007379) #22	mfsd4aa (ENSTNIG00000007380) #23	elk4 (ENSTNIG00000007381) #24	ENSTNIG00000007382	ENSTNIG00000007383	cldn19 (ENSTNIG00000007384)	P3H1 (ENSTNIG00000007385)	zgc:112255 (ENSTNIG00000007386)	ap5b1 (ENSTNIG00000001487)	nuf2 (ENSTNIG00000007387)	CFAP57 (ENSTNIG00000007388)	EFCC1 (ENSTNIG00000007389)	acad9 (ENSTNIG00000007390)	IQSEC1 (ENSTNIG00000007391)	GRIP2 (ENSTNIG00000005990)	slc6a6b (ENSTNIG00000005989)
Fugu	MODERN SPECIES	10	txnrd3 (ENSTRUG00000000449)	bin2b (ENSTRUG00000000397)	ITGA5 (ENSTRUG00000000179)	fbxo2 (ENSTRUG00000020744)	svbp (ENSTRUG00000031729)	wnt4 (ENSTRUG00000000172)	ENSTRUG00000019719	snrpe (ENSTRUG00000025909)	snrpe (ENSTRUG00000025934)	ENSTRUG00000032989	sox13 (ENSTRUG00000000156)	etnk2 (ENSTRUG00000000149)	ENSTRUG00000021545	slc41a1 (ENSTRUG00000000115) #28	ENSTRUG00000000103	CDK18 (ENSTRUG00000000091) #22	mfsd4aa (ENSTRUG00000000083) #23	elk4 (ENSTRUG00000000077) #24	ENSTRUG00000023218	nucks1 (ENSTRUG00000024756) #26	ENSTRUG00000030006	ENSTRUG00000026051	cldn19 (ENSTRUG00000030506)	P3H1 (ENSTRUG00000001367)	zgc:112255 (ENSTRUG00000001822)	ap5b1 (ENSTRUG00000033115)	nuf2 (ENSTRUG00000001944)	ENSTRUG00000002623	EFCC1 (ENSTRUG00000018571)	ENSTRUG00000027720	acad9 (ENSTRUG00000002716)
Eupecaria_A	ANCESTRAL SPECIES		ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT01060000248756	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00950000183014.f.b.a.b	ENSGT00390000008330	ENSGT00940000157312
Ballan wrasse	MODERN SPECIES	50	pdzrn3b (ENSLBEG00000010826)	ENSLBEG00000010750	ENSLBEG00000010543	cntn4 (ENSLBEG00000010374)	ENSLBEG00000010142	ENSLBEG00000010012	ENSLBEG00000009914	cdk5rap1 (ENSLBEG00000009842)	ENSLBEG00000009793	rpn2 (ENSLBEG00000009736)	mybl2b (ENSLBEG00000009692)	ift52 (ENSLBEG00000009649)	acot8 (ENSLBEG00000009600)	slc41a1 (ENSLBEG00000009491) #28	ENSLBEG00000009430	CDK18 (ENSLBEG00000009357) #22	mfsd4aa (ENSLBEG00000009303) #23	elk4 (ENSLBEG00000009265) #24	ENSLBEG00000009178	nucks1a (ENSLBEG00000009131) #26	ENSLBEG00000008957	cldn19 (ENSLBEG00000008853)	P3H1 (ENSLBEG00000008795)	zgc:112255 (ENSLBEG00000008772)	ap5b1 (ENSLBEG00000008749)	nuf2 (ENSLBEG00000008717)	CFAP57 (ENSLBEG00000008640)	EFCC1 (ENSLBEG00000008614)	acad9 (ENSLBEG00000008467)	IQSEC1 (ENSLBEG00000008323)	hdac11 (ENSLBEG00000008220)
Eupecaria_B	ANCESTRAL SPECIES	2	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT01060000248756	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00950000183014.f.b.a.b	ENSGT00390000008330	ENSGT00940000157312
Perciformes	ANCESTRAL SPECIES		ENSGT00950000183042.b.b ##28	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00950000183014.f.b.a.b	ENSGT00390000008330	ENSGT00940000157312
Cottioidei	ANCESTRAL SPECIES		ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00950000183014.f.b.a.b	ENSGT00390000008330	ENSGT00940000157312	ENSGT00940000156915.f.b
Stickleback	MODERN SPECIES	17	CHST13 (ENSGACG00000010830)	txnrd3 (ENSGACG00000010836)	bin2b (ENSGACG00000010864)	ITGA5 (ENSGACG00000010880)	svbp (ENSGACG00000010900)	wnt4 (ENSGACG00000010904)	ENSGACG00000010909	ENSGACG00000010910	ENSGACG00000010913	snrpe (ENSGACG00000010920)	sox13 (ENSGACG00000010931)	etnk2 (ENSGACG00000010934)	ENSGACG00000010938	slc41a1 (ENSGACG00000010942) #28	ENSGACG00000010949	CDK18 (ENSGACG00000010953) #22	mfsd4aa (ENSGACG00000010962) #23	elk4 (ENSGACG00000010970) #24	ENSGACG00000010974	nucks1a (ENSGACG00000010977) #26	ENSGACG00000010989	ENSGACG00000010996	cldn19 (ENSGACG00000010998)	P3H1 (ENSGACG00000011029)	zgc:112255 (ENSGACG00000011063)	ap5b1 (ENSGACG00000011070)	nuf2 (ENSGACG00000011074)	CFAP57 (ENSGACG00000011090)	EFCC1 (ENSGACG00000011102)	ENSGACG00000011105	acad9 (ENSGACG00000011107)
Lumpfish	MODERN SPECIES	20	ENSCLMG00005017137 ##28	CHST13 (ENSCLMG00005017140)	txnrd3 (ENSCLMG00005017163)	bin2b (ENSCLMG00005018839)	ITGA5 (ENSCLMG00005018846)	fbxo2 (ENSCLMG00005018850)	svbp (ENSCLMG00005018851)	wnt4 (ENSCLMG00005018852)	cdc42 (ENSCLMG00005018854)	snrpe (ENSCLMG00005018855)	sox13 (ENSCLMG00005018856)	etnk2 (ENSCLMG00005018857)	ENSCLMG00005018858	slc41a1 (ENSCLMG00005018859) #28	ENSCLMG00005018878	CDK18 (ENSCLMG00005018880) #22	mfsd4aa (ENSCLMG00005018881) #23	elk4 (ENSCLMG00005018883) #24	ENSCLMG00005018884	nucks1a (ENSCLMG00005018885) #26	ENSCLMG00005018886	cldn19 (ENSCLMG00005019018)	P3H1 (ENSCLMG00005019021)	zgc:112255 (ENSCLMG00005019026)	ap5b1 (ENSCLMG00005019028)	nuf2 (ENSCLMG00005019030)	CFAP57 (ENSCLMG00005019034)	EFCC1 (ENSCLMG00005019046)	acad9 (ENSCLMG00005019061)	IQSEC1 (ENSCLMG00005019766)	hdac11 (ENSCLMG00005019781)
Perciformes_a	ANCESTRAL SPECIES	27	ENSGT00950000183042.b.b ##28	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330	ENSGT00940000157312	ENSGT00940000156915.f.b
Channel bull blenny	MODERN SPECIES	19	fbxo2 (ENSCGOG00000011308)	ITGA5 (ENSCGOG00000011066)	bin2b (ENSCGOG00000010998)	txnrd3 (ENSCGOG00000008495)	CHST13 (ENSCGOG00000008454)	ENSCGOG00000008448 ##28	ENSCGOG00000008446	phactr3b (ENSCGOG00000008444)	ENSCGOG00000008436	ENSCGOG00000008435	sox13 (ENSCGOG00000008429)	etnk2 (ENSCGOG00000008402)	ENSCGOG00000008400	slc41a1 (ENSCGOG00000007117) #28	ENSCGOG00000007066	CDK18 (ENSCGOG00000006279) #22	mfsd4aa (ENSCGOG00000006238) #23	elk4 (ENSCGOG00000006229) #24	ENSCGOG00000006226	ENSCGOG00000006223	nucks1a (ENSCGOG00000006222) #26	ENSCGOG00000006208	ENSCGOG00000005563	cldn19 (ENSCGOG00000005529)	P3H1 (ENSCGOG00000004821)	zgc:112255 (ENSCGOG00000004803)	ap5b1 (ENSCGOG00000004800)	nuf2 (ENSCGOG00000004783)	CFAP57 (ENSCGOG00000004753)	ENSCGOG00000004747	ENSCGOG00000004729
Pike perch	MODERN SPECIES	198		dennd6aa (ENSSLUG00000025151)	ENSSLUG00000025140	slmapa (ENSSLUG00000025104)	FLNB (ENSSLUG00000024515)	ENSSLUG00000024416	ENSSLUG00000024415	ENSSLUG00000024413	ENSSLUG00000024412	ENSSLUG00000024393	ENSSLUG00000024388	ccdc51 (ENSSLUG00000024385)	osgn1 (ENSSLUG00000024377)	mtss1 (ENSSLUG00000024368)	ENSSLUG00000024363	CDK18 (ENSSLUG00000024240) #22	mfsd4aa (ENSSLUG00000024227) #23	elk4 (ENSSLUG00000024225) #24
Eupecaria_C	ANCESTRAL SPECIES		ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT01060000248756	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000165186.A	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330
Eupercaria_incertae_sedis	ANCESTRAL SPECIES		ENSGT00950000183042.b.b ##28	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000165186.A	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330
European seabass	MODERN SPECIES	10	ENSDLAG00005011994 ##28	CHST11 (ENSDLAG00005030301)	ENSDLAG00005010367	ENSDLAG00005010296	ENSDLAG00005009967	CCDC23 (ENSDLAG00005034926)	FBXO2 (ENSDLAG00005033331)	ENSDLAG00005034645	ENSDLAG00005009897	ENSDLAG00005029241	sox13 (ENSDLAG00005009851)	ETNK1 (ENSDLAG00005031962)	ENSDLAG00005009818	slc41a1 (ENSDLAG00005009229) #28	KLHDC8A (ENSDLAG00005009207)	CDK18 (ENSDLAG00005008047) #22	mfsd4aa (ENSDLAG00005007973) #23	elk4 (ENSDLAG00005007944) #24	ENSDLAG00005032579	slc45a3 (ENSDLAG00005007917) #25	nucks1a (ENSDLAG00005007913) #26	ENSDLAG00005007792	ENSDLAG00005007780	cldn19 (ENSDLAG00005034537)	ENSDLAG00005007344	zgc:112255 (ENSDLAG00005031506)	ap5b1 (ENSDLAG00005007317)	ENSDLAG00005007279	ENSDLAG00005007230	ENSDLAG00005007219	ENSDLAG00005007191
Large yellow croaker	MODERN SPECIES		SLC41A3 (ENSLCRG00005012331) ##28	CHST13 (ENSLCRG00005012884)	txnrd3 (ENSLCRG00005012892)	ITGA5 (ENSLCRG00005012965)	fbxo2 (ENSLCRG00005013072)	svbp (ENSLCRG00005013075)	wnt4 (ENSLCRG00005013077)	ENSLCRG00005013080	snrpe (ENSLCRG00005013094)	sox13 (ENSLCRG00005013100)	etnk2 (ENSLCRG00005013102)	ENSLCRG00005013105	slc41a1 (ENSLCRG00005013130) #28	ENSLCRG00005014361	ENSLCRG00005014364	CDK18 (ENSLCRG00005014378) #22	mfsd4aa (ENSLCRG00005016557) #23	ENSLCRG00005016558	ENSLCRG00005016559	ARHGEF10L (ENSLCRG00005016561)	ENSLCRG00005016566	osr1 (ENSLCRG00005016567)	ENSLCRG00005016568	dio2 (ENSLCRG00005016569)	dio2 (ENSLCRG00005016570)	ENSLCRG00005016571	RSU1 (ENSLCRG00005016572)	ENSLCRG00005016573	C1QL3 (ENSLCRG00005016574)	ENSLCRG00005016575	ENSLCRG00005016576
Gilthead seabream	MODERN SPECIES	20	ENSSAUG00010005940	txnrd3 (ENSSAUG00010005982)	bin2b (ENSSAUG00010009117)	ITGA5 (ENSSAUG00010009137)	ENSSAUG00010009372	svbp (ENSSAUG00010009376)	ENSSAUG00010009380	wnt4 (ENSSAUG00010009381)	ENSSAUG00010009402	snrpe (ENSSAUG00010009405)	sox13 (ENSSAUG00010009406)	etnk2 (ENSSAUG00010009408)	ENSSAUG00010009409	slc41a1 (ENSSAUG00010009412) #28	ENSSAUG00010009464	CDK18 (ENSSAUG00010009482) #22	mfsd4aa (ENSSAUG00010012295) #23	elk4 (ENSSAUG00010012297) #24	ENSSAUG00010012299	nucks1a (ENSSAUG00010012300) #26	ENSSAUG00010012308	ENSSAUG00010012326	cldn19 (ENSSAUG00010012329)	P3H1 (ENSSAUG00010012340)	zgc:112255 (ENSSAUG00010013214)	ap5b1 (ENSSAUG00010013216)	nuf2 (ENSSAUG00010013217)	CFAP57 (ENSSAUG00010013219)	ENSSAUG00010013222	ENSSAUG00010013224	acad9 (ENSSAUG00010013241)
Percomorphaceae_D	ANCESTRAL SPECIES	3	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT01060000248756	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330	ENSGT00940000157312	ENSGT00940000156915.f.b
Carangaria	ANCESTRAL SPECIES	3	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT01060000248756	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330	ENSGT00940000157312	ENSGT00940000156915.f.b
Carangaria_A	ANCESTRAL SPECIES	7	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT01060000248756	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330	ENSGT00940000157312	ENSGT00940000156915.f.b
Barramundi perch	MODERN SPECIES	184	CHST13 (ENSLCAG00010023260)	txnrd3 (ENSLCAG00010023286)	bin2b (ENSLCAG00010023328)	ITGA5 (ENSLCAG00010023353)	fbxo2 (ENSLCAG00010023391)	svbp (ENSLCAG00010023394)	wnt4 (ENSLCAG00010023404)	cdc42 (ENSLCAG00010023415)	snrpe (ENSLCAG00010023445)	sox13 (ENSLCAG00010023461)	etnk2 (ENSLCAG00010023466)	ENSLCAG00010023472	slc41a1 (ENSLCAG00010023497) #28	ENSLCAG00010023566	ENSLCAG00010023571	CDK18 (ENSLCAG00010023583) #22	mfsd4aa (ENSLCAG00010023590) #23	elk4 (ENSLCAG00010023594) #24	ENSLCAG00010023599	slc45a3 (ENSLCAG00010023607) #25	nucks1a (ENSLCAG00010023611) #26	ENSLCAG00010023632	cldn19 (ENSLCAG00010023691)	P3H1 (ENSLCAG00010023708)	zgc:112255 (ENSLCAG00010023725)	ap5b1 (ENSLCAG00010023726)	nuf2 (ENSLCAG00010023727)	CFAP57 (ENSLCAG00010023734)	ENSLCAG00010023736	ENSLCAG00010023739	acad9 (ENSLCAG00010023837)
Seriola	ANCESTRAL SPECIES	10	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000179002	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT01060000248756	ENSGT01060000250002	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330	ENSGT00940000157312	ENSGT00940000156915.f.b
Greater amberjack	MODERN SPECIES	37	svbp (ENSSDUG00000010349)	wnt4 (ENSSDUG00000010326)	ENSSDUG00000010297	ENSSDUG00000010275	snrpe (ENSSDUG00000010256)	ENSSDUG00000010239	sox13 (ENSSDUG00000010213)	etnk2 (ENSSDUG00000010192)	ENSSDUG00000010141	slc41a1 (ENSSDUG00000010107) #28	ENSSDUG00000010086	ENSSDUG00000010064	ENSSDUG00000010055	ENSSDUG00000010040	ENSSDUG00000010023	CDK18 (ENSSDUG00000009852) #22	mfsd4aa (ENSSDUG00000009816) #23	elk4 (ENSSDUG00000009803) #24	ENSSDUG00000009798	nucks1a (ENSSDUG00000009770) #26	ENSSDUG00000009716	cldn19 (ENSSDUG00000009682)	P3H1 (ENSSDUG00000009645)	zgc:112255 (ENSSDUG00000009624)	ap5b1 (ENSSDUG00000009603)	nuf2 (ENSSDUG00000009586)	CFAP57 (ENSSDUG00000009543)	ENSSDUG00000009528	ENSSDUG00000009464	acad9 (ENSSDUG00000009428)	IQSEC1 (ENSSDUG00000009347)
Yellowtail amberjack	MODERN SPECIES	3081	bin2b (ENSSLDG00000015038)	ITGA5 (ENSSLDG00000015060)	fbxo2 (ENSSLDG00000015099)	svbp (ENSSLDG00000015114)	wnt4 (ENSSLDG00000015165)	cdc42 (ENSSLDG00000015322)	snrpe (ENSSLDG00000015364)	ENSSLDG00000015393	sox13 (ENSSLDG00000015408)	etnk2 (ENSSLDG00000015446)	ENSSLDG00000015481	slc41a1 (ENSSLDG00000015503) #28	ENSSLDG00000015541	ENSSLDG00000015581	ENSSLDG00000015594	CDK18 (ENSSLDG00000015627) #22	mfsd4aa (ENSSLDG00000015755) #23	elk4 (ENSSLDG00000015778) #24	ENSSLDG00000015800	nucks1a (ENSSLDG00000015814) #26	ENSSLDG00000015839	ENSSLDG00000015876	cldn19 (ENSSLDG00000015950)	P3H1 (ENSSLDG00000015970)	zgc:112255 (ENSSLDG00000016016)	ap5b1 (ENSSLDG00000016022)	nuf2 (ENSSLDG00000016036)	CFAP57 (ENSSLDG00000016087)	ENSSLDG00000016202	acad9 (ENSSLDG00000016240)	IQSEC1 (ENSSLDG00000016330)
Pleuronectoidei	ANCESTRAL SPECIES	4																ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00940000157312	ENSGT00940000156915.f.b	ENSGT00940000156308
Tongue sole	MODERN SPECIES	2	barx1 (ENSCSEG00000013430)	ENSCSEG00000013439	ptpdc1a (ENSCSEG00000013446)	ENSCSEG00000013457	stk35l (ENSCSEG00000013485)	ENSCSEG00000013505	arfrp1 (ENSCSEG00000013577)	chia.1 (ENSCSEG00000013647)	chia.3 (ENSCSEG00000014104)	cntn2 (ENSCSEG00000014123)	nfasca (ENSCSEG00000014178) #13	ENSCSEG00000014226 #13	NAAA (ENSCSEG00000014232)	ENSCSEG00000014248	SEMA3F (ENSCSEG00000014282)	CDK18 (ENSCSEG00000014393) #22	ENSCSEG00000014425	MFSD4A (ENSCSEG00000014433) #23	elk4 (ENSCSEG00000014444) #24	ENSCSEG00000014452	nicn1 (ENSCSEG00000014462)	ENSCSEG00000014472	dag1 (ENSCSEG00000014484)	pcbp4 (ENSCSEG00000014487)	rbm15b (ENSCSEG00000014504)	DCAF1 (ENSCSEG00000014518)	DOCK3 (ENSCSEG00000014636)	ENSCSEG00000014720	GRM7 (ENSCSEG00000014789)	ENSCSEG00000014857	YWHAB (ENSCSEG00000015031)
Turbot	MODERN SPECIES	18	cyb561d1 (ENSSMAG00000002813)	atxn7l2a (ENSSMAG00000002745)	sypl2a (ENSSMAG00000002706)	ENSSMAG00000031765	ENSSMAG00000028569	nfasca (ENSSMAG00000001079) #13	ENSSMAG00000029926	ENSSMAG00000019191	ENSSMAG00000003642	chia.2 (ENSSMAG00000003625)	ENSSMAG00000003605	ENSSMAG00000035176	ENSSMAG00000033426	ENSSMAG00000003593	ENSSMAG00000001376	CDK18 (ENSSMAG00000024121) #22	mfsd4aa (ENSSMAG00000035599) #23	elk4 (ENSSMAG00000030126) #24	ENSSMAG00000023811	nucks1a (ENSSMAG00000002668) #26	ENSSMAG00000002584	ENSSMAG00000002294	cldn19 (ENSSMAG00000002547)	ENSSMAG00000002515	zgc:112255 (ENSSMAG00000002499)	ap5b1 (ENSSMAG00000002491)	ENSSMAG00000002470	ENSSMAG00000002400	ENSSMAG00000002345	acad9 (ENSSMAG00000002263)	ENSSMAG00000002107
Anabantaria	ANCESTRAL SPECIES		ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00940000160929	ENSGT00950000184622	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.b.a	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330	ENSGT00940000157312
Zig-zag eel	MODERN SPECIES	19	ENSMAMG00000023482 ##28	ENSMAMG00000023488	ENSMAMG00000023489	ENSMAMG00000023493	ENSMAMG00000023498	ENSMAMG00000023501	ENSMAMG00000023503	ENSMAMG00000023506	ENSMAMG00000023508	ENSMAMG00000023509	sox13 (ENSMAMG00000023510)	etnk2 (ENSMAMG00000023515)	ENSMAMG00000023518	slc41a1 (ENSMAMG00000023521) #28	ENSMAMG00000023523	CDK18 (ENSMAMG00000023527) #22	mfsd4aa (ENSMAMG00000023531) #23	elk4 (ENSMAMG00000023533) #24	ENSMAMG00000028663	NUCKS1 (ENSMAMG00000027361) #26	ENSMAMG00000023539	cldn19 (ENSMAMG00000025446)	ENSMAMG00000023544	zgc:112255 (ENSMAMG00000023549)	ap5b1 (ENSMAMG00000023551)	ENSMAMG00000023553	ENSMAMG00000023555	ENSMAMG00000023572	acad9 (ENSMAMG00000023563)	IQSEC1 (ENSMAMG00000023576)	hdac11 (ENSMAMG00000026485)
Anabantoidei	ANCESTRAL SPECIES	1	ENSGT00940000157562.q.a	ENSGT00940000161921.e.a	ENSGT00950000183042.b.b ##28	ENSGT00940000161154.a	ENSGT00940000159178	ENSGT00950000182882.A.a.i.a	ENSGT00940000158061.b	ENSGT00390000006113	ENSGT00940000159654	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00940000165705	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000004199	ENSGT00620000088018	ENSGT00940000163561	ENSGT00390000008330	ENSGT00940000157312
Siamese fighting fish	MODERN SPECIES	16	ENSBSLG00000006166 ##28	CHST13 (ENSBSLG00000006159)	txnrd3 (ENSBSLG00000006071)	bin2b (ENSBSLG00000006042)	ITGA5 (ENSBSLG00000005476)	ENSBSLG00000005233	svbp (ENSBSLG00000005215)	wnt4 (ENSBSLG00000005086)	ENSBSLG00000004987	ENSBSLG00000004912	sox13 (ENSBSLG00000004811)	etnk2 (ENSBSLG00000004320)	ENSBSLG00000004314	slc41a1 (ENSBSLG00000003921) #28	ENSBSLG00000003438	CDK18 (ENSBSLG00000003415) #22	mfsd4aa (ENSBSLG00000003413) #23	elk4 (ENSBSLG00000003412) #24	ENSBSLG00000003411	slc45a3 (ENSBSLG00000003410) #25	nucks1a (ENSBSLG00000003409) #26	ENSBSLG00000003404	ENSBSLG00000003403	cldn19 (ENSBSLG00000003399)	zgc:112255 (ENSBSLG00000003398)	ap5b1 (ENSBSLG00000003394)	nuf2 (ENSBSLG00000003387)	ENSBSLG00000003381	ENSBSLG00000003378	acad9 (ENSBSLG00000003376)	IQSEC1 (ENSBSLG00000003343)
Climbing perch	MODERN SPECIES	18					ENSATEG00000005707	ENSATEG00000027288	ENSATEG00000005670	ENSATEG00000005632	ENSATEG00000028800	sox13 (ENSATEG00000005300)	etnk2 (ENSATEG00000005314)	ENSATEG00000005349	slc41a1 (ENSATEG00000005356) #28	ENSATEG00000005413	ENSATEG00000005419	CDK18 (ENSATEG00000005425) #22	mfsd4aa (ENSATEG00000005480) #23	elk4 (ENSATEG00000005529) #24	ENSATEG00000005537	slc45a3 (ENSATEG00000005547) #25	nucks1a (ENSATEG00000029461) #26	ENSATEG00000004774	ENSATEG00000004853	cldn19 (ENSATEG00000004861)	ENSATEG00000004872	zgc:112255 (ENSATEG00000025238)	ap5b1 (ENSATEG00000004949)	ENSATEG00000004968	ENSATEG00000005013	ENSATEG00000005092	ENSATEG00000029300
Pinecone sodierfish	MODERN SPECIES	19	SLC41A3 (ENSMMDG00005000986) ##28	CHST13 (ENSMMDG00005000983)	txnrd3 (ENSMMDG00005000600)	bin2b (ENSMMDG00005000472)	ITGA5 (ENSMMDG00005000447)	fbxo2 (ENSMMDG00005000440)	svbp (ENSMMDG00005000437)	wnt4 (ENSMMDG00005000390)	ENSMMDG00005000365	snrpe (ENSMMDG00005000352)	sox13 (ENSMMDG00005000331)	etnk2 (ENSMMDG00005000322)	ENSMMDG00005000310	slc41a1 (ENSMMDG00005000298) #28	ENSMMDG00005000244	CDK18 (ENSMMDG00005000213) #22	mfsd4aa (ENSMMDG00005000194) #23	elk4 (ENSMMDG00005000144) #24	ENSMMDG00005020825	slc45a3 (ENSMMDG00005020819) #25	nucks1a (ENSMMDG00005020809) #26	ENSMMDG00005020674	cldn19 (ENSMMDG00005020661)	P3H1 (ENSMMDG00005020654)	zgc:112255 (ENSMMDG00005020648)	ap5b1 (ENSMMDG00005020647)	nuf2 (ENSMMDG00005020645)	ENSMMDG00005020643	ENSMMDG00005020640	acad9 (ENSMMDG00005018844)	IQSEC1 (ENSMMDG00005018667)
Cod	MODERN SPECIES		ENSGMOG00000025838	tp53rk (ENSGMOG00000017301)	slc2a10 (ENSGMOG00000017313)	ENSGMOG00000017328	ENSGMOG00000025121	ENSGMOG00000019519	ube2v1 (ENSGMOG00000037011)	ENSGMOG00000028258	ENSGMOG00000016311	ENSGMOG00000036448	sox13 (ENSGMOG00000004316)	etnk2 (ENSGMOG00000004351)	ENSGMOG00000002040	slc41a1 (ENSGMOG00000004376) #28	ENSGMOG00000001709	CDK18 (ENSGMOG00000005605) #22	mfsd4aa (ENSGMOG00000018267) #23	elk4 (ENSGMOG00000023479) #24	ENSGMOG00000003751	nucks1a (ENSGMOG00000003790) #26	ENSGMOG00000000550	cldn19 (ENSGMOG00000032183)	ENSGMOG00000002648	ENSGMOG00000033896	ENSGMOG00000023931	ENSGMOG00000031686	ENSGMOG00000005106	ENSGMOG00000000571	ENSGMOG00000000902	ENSGMOG00000033301	ENSGMOG00000034567
Protacanthopterygii	ANCESTRAL SPECIES	3	ENSGT00940000165359.b	ENSGT00940000155203.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b	ENSGT00940000153675.a.a.b	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a.d	ENSGT01030000235220	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00940000178268.a	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000009359.b	ENSGT00940000164964.a.a	ENSGT00940000155758	ENSGT00390000017736.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	3	ENSGT00940000165359.a	ENSGT00940000165359.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654.fb.b	ENSGT00940000153675.a.b.a	ENSGT00940000153675.a.a.b	ENSGT00390000012818.f	ENSGT00940000158759.j	ENSGT00950000182939.b.a.a.d.b	ENSGT01030000235220	ENSGT00950000183042.a.a.j #28	ENSGT00940000166776.f	ENSGT00940000159482.e #22	ENSGT00530000063320.A.i.f #23	ENSGT00940000158900.o #24	ENSGT00940000166195.e	ENSGT00950000182914.b.fb.a #25	ENSGT00940000153414.B.nb #26	ENSGT00940000156266.a	ENSGT00940000158624.f	ENSGT00940000158725.i	ENSGT00390000009359.b.o	ENSGT00940000155758.p	ENSGT00390000017736.b.a	ENSGT00390000013558.a.a.f	ENSGT00390000015823.f.b	ENSGT00730000111059.a.c	ENSGT00400000023987.c.d
Salmoninae_a	ANCESTRAL SPECIES	25	ENSGT00940000160817	ENSGT00940000158192.`b	ENSGT00940000155203.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654.fb.b	ENSGT00940000153675.a.b.a	ENSGT00390000012818.e.a	ENSGT00940000158759.j	ENSGT00950000182939.b.a.a.d.b	ENSGT01030000235220	ENSGT00950000183042.a.a.j #28	ENSGT00940000166776.f	ENSGT00940000159482.e #22	ENSGT00530000063320.A.i.f #23	ENSGT00940000158900.o #24	ENSGT00940000166195.e	ENSGT00950000182914.b.fb.a #25	ENSGT00940000153414.B.nb #26	ENSGT00940000156266.a	ENSGT00940000158624.f	ENSGT00940000158725.i	ENSGT00390000009359.b.o	ENSGT00940000155758.p	ENSGT00390000017736.b.a	ENSGT00390000013558.a.a.f	ENSGT00390000015823.f.b	ENSGT00730000111059.a.c	ENSGT00400000023987.c.d
Oncorhynchus	ANCESTRAL SPECIES	5	ENSGT00940000165359.b	ENSGT00940000158192.`b	ENSGT00940000155203.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654.fb.b	ENSGT00940000153675.a.b.a	ENSGT00390000012818.e.b	ENSGT00940000158759.j	ENSGT00950000182939.b.a.a.c	ENSGT01030000235220	ENSGT00950000183042.a.a.j #28	ENSGT00940000166776.f	ENSGT00940000159482.e #22	ENSGT00940000178268.a	ENSGT00940000158900.o #24	ENSGT00940000166195.e	ENSGT00950000182914.b.fb.a #25	ENSGT00940000153414.B.nb #26	ENSGT00940000156240.s	ENSGT00940000156266.a	ENSGT00940000158624.f	ENSGT00940000158725.i	ENSGT00390000009359.b.o	ENSGT00940000155758.p	ENSGT00390000017736.b.a	ENSGT00390000013558.a.a.f	ENSGT00390000015823.f.b	ENSGT00730000111059.a.c
Rainbow trout	MODERN SPECIES	28	ENSOMYG00000053759	ENSOMYG00000064011	DNAJC11 (ENSOMYG00000029723)	PHF13 (ENSOMYG00000029803)	fbxo2 (ENSOMYG00000029814)	svbp (ENSOMYG00000070754)	wnt4a1 (ENSOMYG00000029882)	ENSOMYG00000029933	snrpe (ENSOMYG00000029951)	sox13 (ENSOMYG00000030013)	etnk2 (ENSOMYG00000030110)	ENSOMYG00000030150	slc41a1 (ENSOMYG00000030508) #28	ENSOMYG00000050763	ENSOMYG00000031352	ENSOMYG00000031627 #22	elk4 (ENSOMYG00000032575) #24	ENSOMYG00000032577	slc45a3 (ENSOMYG00000032584) #25	nucks1a (ENSOMYG00000032614) #26	ENSOMYG00000032818	ENSOMYG00000058584	ENSOMYG00000047961	cldn19 (ENSOMYG00000033080)	ENSOMYG00000033481	NECAP2 (ENSOMYG00000036671)	ENSOMYG00000063647	CROCC (ENSOMYG00000036678)	MFAP2 (ENSOMYG00000036701)	SDHB (ENSOMYG00000036773)	ENSOMYG00000036894
Oncorhynchus_a	ANCESTRAL SPECIES	4	ENSGT00510000049583.l	ENSGT00940000158192.`b	ENSGT00940000155203.b	ENSGT00860000133842.m	ENSGT00530000063882.a	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654.fb.b	ENSGT00940000153675.a.b.a	ENSGT00390000012818.e.a	ENSGT00940000158759.j	ENSGT00950000182939.b.a.a.d.b	ENSGT01030000235220	ENSGT00950000183042.a.a.j #28	ENSGT00940000166776.f	ENSGT00940000159482.e #22	ENSGT00940000178268.a	ENSGT00940000158900.o #24	ENSGT00940000166195.e	ENSGT00950000182914.b.fb.a #25	ENSGT00940000153414.B.nb #26	ENSGT00940000156240.s	ENSGT00940000156266.a	ENSGT00940000158624.f	ENSGT00940000158725.i	ENSGT00390000009359.b.o	ENSGT00940000155758.p	ENSGT00390000017736.b.a	ENSGT00390000013558.a.a.f	ENSGT00390000015823.f.b	ENSGT00730000111059.a.c
Coho salmon	MODERN SPECIES	25	VAMP3 (ENSOKIG00005015094)	ENSOKIG00005015114	ENSOKIG00005015130	DNAJC11 (ENSOKIG00005015146)	PHF13 (ENSOKIG00005015277)	fbxo2 (ENSOKIG00005015286)	svbp (ENSOKIG00005015295)	wnt4 (ENSOKIG00005015323)	cdc42 (ENSOKIG00005015406)	snrpe (ENSOKIG00005015427)	sox13 (ENSOKIG00005015444)	etnk2 (ENSOKIG00005015465)	ENSOKIG00005015483	slc41a1 (ENSOKIG00005015529) #28	ENSOKIG00005016230	CDK18 (ENSOKIG00005016294) #22	ENSOKIG00005017378	elk4 (ENSOKIG00005017381) #24	ENSOKIG00005017387	slc45a3 (ENSOKIG00005017392) #25	nucks1a (ENSOKIG00005017402) #26	ENSOKIG00005017438	ENSOKIG00005017551	cldn19 (ENSOKIG00005017565)	P3H1 (ENSOKIG00005017623)	necap2 (ENSOKIG00005018302)	CROCC (ENSOKIG00005018315)	MFAP2 (ENSOKIG00005018376)	sdhb (ENSOKIG00005018399)	mrpl20 (ENSOKIG00005018531)	ATAD3A (ENSOKIG00005018547)
Chinook salmon	MODERN SPECIES	31	VAMP3 (ENSOTSG00005000842)	CAMTA1 (ENSOTSG00005000853)	DNAJC11 (ENSOTSG00005000877)	PHF13 (ENSOTSG00005000900)	fbxo2 (ENSOTSG00005000907)	svbp (ENSOTSG00005000914)	wnt4 (ENSOTSG00005000926)	cdc42 (ENSOTSG00005001002)	ENSOTSG00005001008	snrpe (ENSOTSG00005001013)	sox13 (ENSOTSG00005001023)	etnk2 (ENSOTSG00005001026)	ENSOTSG00005001043	slc41a1 (ENSOTSG00005001114) #28	ENSOTSG00005001630	CDK18 (ENSOTSG00005001664) #22	ENSOTSG00005003498	elk4 (ENSOTSG00005003500) #24	ENSOTSG00005003505	slc45a3 (ENSOTSG00005003637) #25	nucks1a (ENSOTSG00005003643) #26	ENSOTSG00005003649	ENSOTSG00005003651	ENSOTSG00005003652	cldn19 (ENSOTSG00005003653)	P3H1 (ENSOTSG00005003668)	necap2 (ENSOTSG00005005939)	ENSOTSG00005005942	MFAP2 (ENSOTSG00005005946)	sdhb (ENSOTSG00005005948)	ATAD3A (ENSOTSG00005006529)
Salmo	ANCESTRAL SPECIES	6	ENSGT00530000063882.a	ENSGT00940000160929	ENSGT00390000006113	ENSGT00940000159654.fb.b	ENSGT00940000153675.a.b.a	ENSGT00390000012818.e.a	ENSGT00940000159654.fb.a	ENSGT00940000153675.b	ENSGT00390000012818.f	ENSGT00940000158759.j	ENSGT00950000182939.b.a.a.d.b	ENSGT01030000235220	ENSGT00940000163561	ENSGT00950000183042.a.a.j #28	ENSGT00940000166776.f	ENSGT00940000159482.e #22	ENSGT00530000063320.A.i.f #23	ENSGT00940000158900.o #24	ENSGT00940000166195.e	ENSGT00950000182914.b.fb.a #25	ENSGT00940000153414.B.nb #26	ENSGT00940000156266.a	ENSGT00940000158624.f	ENSGT00940000158725.i	ENSGT00390000009359.b.o	ENSGT00940000155758.p	ENSGT00390000017736.b.a.b	ENSGT00940000164964.a.a.c	ENSGT00390000017736.b.a.a	ENSGT00390000013558.a.a.f	ENSGT00390000015823.f.b
River trout	MODERN SPECIES	7	DNAJC11 (ENSSTUG00000003969)	PHF13 (ENSSTUG00000003917)	fbxo2 (ENSSTUG00000003905)	svbp (ENSSTUG00000003892)	ENSSTUG00000003889	wnt4 (ENSSTUG00000003814)	cdc42 (ENSSTUG00000003783)	snrpe (ENSSTUG00000003714)	ENSSTUG00000003702	sox13 (ENSSTUG00000003686)	etnk2 (ENSSTUG00000003629)	ENSSTUG00000003610	slc41a1 (ENSSTUG00000002287) #28	ENSSTUG00000020989	ENSSTUG00000020984	CDK18 (ENSSTUG00000020297) #22	mfsd4aa (ENSSTUG00000020242) #23	elk4 (ENSSTUG00000020214) #24	ENSSTUG00000020189	ENSSTUG00000020183	slc45a3 (ENSSTUG00000020159) #25	nucks1a (ENSSTUG00000020150) #26	ENSSTUG00000020142	ENSSTUG00000020050	cldn19 (ENSSTUG00000020038)	P3H1 (ENSSTUG00000019533)	necap2 (ENSSTUG00000019491)	CROCC (ENSSTUG00000019304)	MFAP2 (ENSSTUG00000019269)	sdhb (ENSSTUG00000019148)	mrpl20 (ENSSTUG00000019054)
Atlantic salmon	MODERN SPECIES	14	DNAJC11 (ENSSSAG00000077761)	ENSSSAG00000105986	ENSSSAG00000087404	PHF13 (ENSSSAG00000118443)	fbxo2 (ENSSSAG00000084563)	ENSSSAG00000102861	ENSSSAG00000092855	ENSSSAG00000058668	CDC42 (ENSSSAG00000077838)	snrpe (ENSSSAG00000077850)	sox13 (ENSSSAG00000058488)	etnk2 (ENSSSAG00000091898)	ENSSSAG00000108137	slc41a1 (ENSSSAG00000077999) #28	ENSSSAG00000089885	CDK18 (ENSSSAG00000042486) #22	mfsd4aa (ENSSSAG00000079406) #23	elk4 (ENSSSAG00000079423) #24	ENSSSAG00000079425	ENSSSAG00000101063	slc45a3 (ENSSSAG00000088753) #25	nucks1 (ENSSSAG00000079432) #26	ENSSSAG00000041954	ENSSSAG00000039596	cldn19 (ENSSSAG00000079973)	ENSSSAG00000080016	NECAP2 (ENSSSAG00000080235)	ENSSSAG00000080250	MFAP2 (ENSSSAG00000080280)	ENSSSAG00000080304	ATAD3A (ENSSSAG00000080310)
Huchen	MODERN SPECIES	786								wnt4 (ENSHHUG00000031084)	ENSHHUG00000031324	snrpe (ENSHHUG00000031441)	sox13 (ENSHHUG00000031444)	etnk2 (ENSHHUG00000031462)	ENSHHUG00000031486	slc41a1 (ENSHHUG00000031492) #28	ENSHHUG00000031506	CDK18 (ENSHHUG00000031528) #22	mfsd4aa (ENSHHUG00000031938) #23	elk4 (ENSHHUG00000031947) #24	ENSHHUG00000031954	slc45a3 (ENSHHUG00000031966) #25	nucks1a (ENSHHUG00000031976) #26	ENSHHUG00000032007
Salmoninae	ANCESTRAL SPECIES	261									ENSGT00940000159654.gb	ENSGT00940000153675.a.a.a.b	ENSGT00390000012818.e.a	ENSGT00940000158759.i	ENSGT00950000182939.b.a.a.d.a	ENSGT00950000183042.a.a.i #28	ENSGT00940000166776.e	ENSGT00940000159482.f #22	ENSGT00530000063320.A.i.e #23	ENSGT00940000158900.p #24	ENSGT00940000166195.f	ENSGT00950000182914.b.fb.b #25	ENSGT00940000153414.B.ob #26	ENSGT00940000156266.b	ENSGT00940000158624.e	ENSGT00940000158725.j	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000009359.b.p	ENSGT00940000164964.a.a	ENSGT00940000155758.q	ENSGT00390000017736.b.b	ENSGT00390000013558.a.a.e
Huchen	MODERN SPECIES	879														ENSHHUG00000019449 ##28	ENSHHUG00000019434	CDK18 (ENSHHUG00000019233) #22	ENSHHUG00000019231	ENSHHUG00000019225	ENSHHUG00000019210 #23	elk4 (ENSHHUG00000019192) #24	ENSHHUG00000019182	slc45a3 (ENSHHUG00000019159) #25	nucks1a (ENSHHUG00000019132) #26	ENSHHUG00000018393	ENSHHUG00000018383
Salmoninae_a	ANCESTRAL SPECIES	29	ENSGT00390000006238.pb.b	ENSGT00940000158496.g	ENSGT00940000156971.B.a.d.b	ENSGT00940000157867.a.a.c.a	ENSGT00390000001231.f	ENSGT00940000156759.a.b.b.d	ENSGT00390000014309.h	ENSGT01090000260431	ENSGT00440000033870.a.b.b	ENSGT00940000160679.d	ENSGT00390000012818.e.b	ENSGT00940000158759.i	ENSGT00950000182939.b.a.a.d.a	ENSGT00950000183042.a.a.i #28	ENSGT00940000166776.e	ENSGT00940000159482.f #22	ENSGT00980000201240	ENSGT00530000063320.A.i.e #23	ENSGT00940000158900.p #24	ENSGT00940000166195.f	ENSGT00950000182914.b.fb.b #25	ENSGT00940000153414.B.ob #26	ENSGT00940000156266.b	ENSGT00940000158624.e	ENSGT00940000158725.j	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000009359.b.p	ENSGT00940000164964.a.a.c	ENSGT00940000155758.q	ENSGT00390000017736.b.b
Salmo	ANCESTRAL SPECIES	73										ENSGT00940000160187.c.a	ENSGT00390000012818.e.b	ENSGT00940000158759.i	ENSGT00950000182939.b.a.a.d.a	ENSGT00950000183042.a.a.i #28	ENSGT00940000166776.e	ENSGT00940000159482.f #22	ENSGT00980000201240	ENSGT00530000063320.A.i.e #23	ENSGT00940000158900.p #24	ENSGT00940000166195.f	ENSGT00950000182914.b.fb.b #25	ENSGT00940000153414.B.ob #26	ENSGT00940000156266.b	ENSGT00940000158624.e	ENSGT00940000158725.j	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000009359.b.p	ENSGT00940000155758.q	ENSGT00390000017736.b.b	ENSGT00390000013558.a.a.e
River trout	MODERN SPECIES	5	MRTO4 (ENSSTUG00000003344)	akr7a3 (ENSSTUG00000003365)	MEGF6 (ENSSTUG00000003494)	KCNAB2 (ENSSTUG00000004509)	park7 (ENSSTUG00000004631)	pax7a (ENSSTUG00000004759)	mrps16 (ENSSTUG00000005267)	errfi1a (ENSSTUG00000005281)	tas1r3 (ENSSTUG00000005301)	ENSSTUG00000005307	snrpe (ENSSTUG00000005332)	sox13 (ENSSTUG00000005410)	etnk2 (ENSSTUG00000005464)	slc41a1 (ENSSTUG00000005621) #28	ENSSTUG00000006400	CDK18 (ENSSTUG00000006459) #22	mfsd4aa (ENSSTUG00000007472) #23	ENSSTUG00000007524	elk4 (ENSSTUG00000007536) #24	ENSSTUG00000007577	slc45a3 (ENSSTUG00000007586) #25	nucks1a (ENSSTUG00000007597) #26	ENSSTUG00000007642	cldn19 (ENSSTUG00000007684)	P3H1 (ENSSTUG00000007742)	zgc:112255 (ENSSTUG00000008132)	ap5b1 (ENSSTUG00000008143)	necap2 (ENSSTUG00000008153)	CROCC (ENSSTUG00000008170)	MFAP2 (ENSSTUG00000008238)	sdhb (ENSSTUG00000008257)
Atlantic salmon	MODERN SPECIES	3	ENSSSAG00000064545	ENSSSAG00000093954	ENSSSAG00000092801	ENSSSAG00000064532	foxp4 (ENSSSAG00000059331)	ENSSSAG00000118889	ENSSSAG00000083790	tfeb (ENSSSAG00000095492)	ENSSSAG00000118892	CDC42 (ENSSSAG00000058625)	SNRPE (ENSSSAG00000058564)	sox13 (ENSSSAG00000077869)	etnk2 (ENSSSAG00000090963)	slc41a1 (ENSSSAG00000055604) #28	ENSSSAG00000116126	CDK18 (ENSSSAG00000078351) #22	ENSSSAG00000042373	mfsd4aa (ENSSSAG00000042349) #23	elk4 (ENSSSAG00000042336) #24	ENSSSAG00000042317	slc45a3 (ENSSSAG00000089212) #25	nucks1a (ENSSSAG00000109513) #26	ENSSSAG00000079476	cldn19 (ENSSSAG00000120924)	ENSSSAG00000040801	cssa12h1orf50 (ENSSSAG00000040758)	ap5b1 (ENSSSAG00000040746)	ENSSSAG00000040727	ENSSSAG00000040280	MFAP2 (ENSSSAG00000040199)	ENSSSAG00000080286
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00940000160679.d	ENSGT00940000160187.d	ENSGT00940000159691.k.b	ENSGT00390000009310.cb	ENSGT01050000244900.a.a.a.a.a.v	ENSGT00940000161847.b.a.e.b	ENSGT00950000183127.c.b.c	ENSGT00950000184622	ENSGT00940000159654.fb.a	ENSGT00940000153675.a.a.a.b.d	ENSGT00390000012818.e.a	ENSGT00940000158759.i	ENSGT00950000182939.b.a.a.d.a	ENSGT00950000183042.a.a.i #28	ENSGT00940000166776.e	ENSGT00940000159482.f #22	ENSGT00980000201240	ENSGT00530000063320.A.i.e #23	ENSGT00940000158900.p #24	ENSGT00940000166195.f	ENSGT00950000182914.b.fb.b #25	ENSGT00940000153414.B.ob #26	ENSGT00940000156266.b	ENSGT00940000158624.e	ENSGT00940000158725.j	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000009359.b.p	ENSGT00940000164964.a.a.c	ENSGT00390000017736.b.b	ENSGT00390000013558.a.a.e
Rainbow trout	MODERN SPECIES	8	ENSOMYG00000012006	ENSOMYG00000011985	ENSOMYG00000011966	HA2B (ENSOMYG00000011927)	ENSOMYG00000011899	ENSOMYG00000012024	wnt4a2 (ENSOMYG00000062334)	ENSOMYG00000061908	snrpe (ENSOMYG00000011759)	sox13 (ENSOMYG00000011736)	etnk2 (ENSOMYG00000011689)	slc41a1 (ENSOMYG00000011100) #28	ENSOMYG00000011003	ENSOMYG00000077504	ENSOMYG00000067592	CDK18 (ENSOMYG00000010942) #22	ENSOMYG00000068742	mfsd4aa (ENSOMYG00000010887) #23	elk4 (ENSOMYG00000010851) #24	ENSOMYG00000066688	ENSOMYG00000010837	slc45a3 (ENSOMYG00000010824) #25	ENSOMYG00000052486	ENSOMYG00000010830	ENSOMYG00000010745	cldn19 (ENSOMYG00000010712)	ENSOMYG00000009601	c17h1orf50 (ENSOMYG00000009284)	ap5b1 (ENSOMYG00000009262)	ENSOMYG00000009211	ENSOMYG00000022395
Oncorhynchus_a	ANCESTRAL SPECIES	3	ENSGT00940000160679.d	ENSGT00940000158700.c.a	ENSGT00940000160187.c.a	ENSGT00940000159691.k.b	ENSGT00390000009310.cb	ENSGT01050000244900.a.a.a.a.a.v	ENSGT00940000161847.b.a.e.b	ENSGT00950000183127.c.b.c	ENSGT00940000159654.fb.a	ENSGT00940000153675.b	ENSGT00390000012818.f	ENSGT00940000158759.i	ENSGT00950000182939.b.a.a.d.a	ENSGT00950000183042.a.a.i #28	ENSGT00940000166776.e	ENSGT00940000159482.f #22	ENSGT00530000063320.A.i.e #23	ENSGT00940000158900.p #24	ENSGT00940000166195.f	ENSGT00950000182914.b.fb.b #25	ENSGT00940000153414.B.ob #26	ENSGT00940000156266.b	ENSGT00940000158624.e	ENSGT00940000158725.j	ENSGT00390000003084	ENSGT00530000064721	ENSGT00390000009359.b.p	ENSGT00940000164964.a.a.c	ENSGT00390000017736.b.b	ENSGT00390000013558.a.a.e	ENSGT00390000015823.f.a
Coho salmon	MODERN SPECIES		ENSOKIG00005041943	foxp4 (ENSOKIG00005041966)	MDFI (ENSOKIG00005042141)	tfeb (ENSOKIG00005042177)	tmem183a (ENSOKIG00005042255)	ENSOKIG00005042282	zgc:123107 (ENSOKIG00005042302)	mhc2dgb (ENSOKIG00005042330)	WNT4 (ENSOKIG00005042356)	ENSOKIG00005042446	snrpe (ENSOKIG00005042472)	sox13 (ENSOKIG00005042515)	etnk2 (ENSOKIG00005042564)	slc41a1 (ENSOKIG00005042685) #28	ENSOKIG00005043512	CDK18 (ENSOKIG00005043559) #22	ENSOKIG00005043811	mfsd4aa (ENSOKIG00005043817) #23	elk4 (ENSOKIG00005043870) #24	ENSOKIG00005043885	slc45a3 (ENSOKIG00005043893) #25	nucks1a (ENSOKIG00005043913) #26	ENSOKIG00005043975	cldn19 (ENSOKIG00005044205)	P3H1 (ENSOKIG00005044257)	zgc:112255 (ENSOKIG00005044541)	ap5b1 (ENSOKIG00005044550)	ENSOKIG00005044558	ENSOKIG00005044580	MFAP2 (ENSOKIG00005044653)	SDHB (ENSOKIG00005044672)
Chinook salmon	MODERN SPECIES	11	ENSOTSG00005010441	ENSOTSG00005010440	her2 (ENSOTSG00005010439)	aldh4a1 (ENSOTSG00005010373)	MRTO4 (ENSOTSG00005010370)	akr7a3 (ENSOTSG00005010368)	tfeb (ENSOTSG00005010367)	tmem183a (ENSOTSG00005010365)	ENSOTSG00005010364	ENSOTSG00005010363	SNRPE (ENSOTSG00005010362)	sox13 (ENSOTSG00005010361)	etnk2 (ENSOTSG00005010358)	slc41a1 (ENSOTSG00005010346) #28	ENSOTSG00005010344	CDK18 (ENSOTSG00005010341) #22	mfsd4aa (ENSOTSG00005010340) #23	elk4 (ENSOTSG00005010339) #24	ENSOTSG00005010338	slc45a3 (ENSOTSG00005010336) #25	nucks1a (ENSOTSG00005010332) #26	ENSOTSG00005010331	cldn19 (ENSOTSG00005010330)	P3H1 (ENSOTSG00005010293)	ap5b1 (ENSOTSG00005010291)	zgc:112255 (ENSOTSG00005010290)	necap2 (ENSOTSG00005010289)	ENSOTSG00005010285	MFAP2 (ENSOTSG00005010280)	sdhb (ENSOTSG00005010189)	ENSOTSG00005010188
Northern pike	MODERN SPECIES	16	DNAJC11 (ENSELUG00000012267)	PHF13 (ENSELUG00000012294)	fbxo2 (ENSELUG00000012321)	svbp (ENSELUG00000012304)	wnt4 (ENSELUG00000012344)	ENSELUG00000000454	ENSELUG00000012390	snrpe (ENSELUG00000026835)	sox13 (ENSELUG00000012545)	etnk2 (ENSELUG00000012594)	ENSELUG00000012614	slc41a1 (ENSELUG00000012640) #28	ENSELUG00000032400	ENSELUG00000012687	ENSELUG00000034340	CDK18 (ENSELUG00000012733) #22	mfsd4aa (ENSELUG00000012777) #23	elk4 (ENSELUG00000012806) #24	ENSELUG00000012819	slc45a3 (ENSELUG00000012857) #25	ENSELUG00000012952	cldn19 (ENSELUG00000000470)	P3H1 (ENSELUG00000013026)	lg17h1orf50 (ENSELUG00000013076)	ap5b1 (ENSELUG00000013098)	necap2 (ENSELUG00000013114)	ENSELUG00000033117	CROCC (ENSELUG00000013255)	MFAP2 (ENSELUG00000013339)	sdhb (ENSELUG00000013365)	ENSELUG00000032577
Otomorpha	ANCESTRAL SPECIES	69	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00940000157024.k.a #13	ENSGT00940000164703.a	ENSGT00940000161149	ENSGT00940000162989.e	ENSGT00940000162989.f.a.a	ENSGT00920000149095	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT01030000235220	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000153675.a.b.a	ENSGT00940000159654	ENSGT00390000006113	ENSGT00940000160929	ENSGT00530000063882.a
Clupeiformes	ANCESTRAL SPECIES	173	ENSGT00390000014507.b #8	ENSGT00940000159692 #9	ENSGT00940000154404.b #10	ENSGT00940000158263 #11	ENSGT00940000157024.k.a #13	ENSGT00940000164703.a	ENSGT00940000161149	ENSGT00940000162989.f.a.a	ENSGT00940000162989.e	ENSGT00920000149095	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000153675.a.a.a.b	ENSGT00940000159654	ENSGT00390000006113	ENSGT00940000160929	ENSGT00530000063882.a
Denticle herring	MODERN SPECIES	3	GPR37L1 (ENSDCDG00000020374)	ELF3 (ENSDCDG00000020370)	apobec2a (ENSDCDG00000020366)	ENSDCDG00000020365	srsf3b (ENSDCDG00000020353)	cdkn1a (ENSDCDG00000020352)	tmcc2 (ENSDCDG00000020346) #18	usp49 (ENSDCDG00000020343)	med20 (ENSDCDG00000020340)	bysl (ENSDCDG00000020339)	ccnd3 (ENSDCDG00000020337)	NUAK2 (ENSDCDG00000020336) #19	slc41a1 (ENSDCDG00000020224) #28	ENSDCDG00000020205	ENSDCDG00000020194	CDK18 (ENSDCDG00000017479) #22	mfsd4aa (ENSDCDG00000017399) #23	elk4 (ENSDCDG00000017387) #24	ENSDCDG00000017381	slc45a3 (ENSDCDG00000017379) #25	prickle2b (ENSDCDG00000017367)	slc2a9l1 (ENSDCDG00000017364)	psmd6 (ENSDCDG00000017348)	ATXN7 (ENSDCDG00000017336)	thoc7 (ENSDCDG00000017329)	SYNPR (ENSDCDG00000017325)	nampt2 (ENSDCDG00000016915)	ENSDCDG00000016705	fezf2 (ENSDCDG00000035324)	C3orf14 (ENSDCDG00000035321)	ENSDCDG00000035319
Atlantic herring	MODERN SPECIES	21	PLEKHA6 (ENSCHAG00000026057) #9	ENSCHAG00000026113 #10	PIK3C2B (ENSCHAG00000026137) #11	nfasca (ENSCHAG00000026572) #13	cntn2 (ENSCHAG00000027689)	chia.1 (ENSCHAG00000027705)	chia.3 (ENSCHAG00000000268)	ENSCHAG00000000537	ENSCHAG00000000725	snrpe (ENSCHAG00000000758)	sox13 (ENSCHAG00000000802)	etnk2 (ENSCHAG00000000949)	ENSCHAG00000001021	slc41a1 (ENSCHAG00000001341) #28	ENSCHAG00000003324	CDK18 (ENSCHAG00000003490) #22	mfsd4aa (ENSCHAG00000008426) #23	elk4 (ENSCHAG00000008540) #24	ENSCHAG00000008549	slc45a3 (ENSCHAG00000008600) #25	nucks1a (ENSCHAG00000008611) #26	ENSCHAG00000008640	cldn19 (ENSCHAG00000008814)	P3H1 (ENSCHAG00000008835)	zgc:112255 (ENSCHAG00000009358)	ap5b1 (ENSCHAG00000009370)	CDC42 (ENSCHAG00000009377)	wnt4 (ENSCHAG00000009418)	ENSCHAG00000009663	svbp (ENSCHAG00000009669)	fbxo2 (ENSCHAG00000009679)
Otophysi	ANCESTRAL SPECIES	153				ENSGT00940000155314.o	ENSGT00940000155314.p	ENSGT00940000158776	ENSGT00390000017874.a	ENSGT00390000009989	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT01030000235220	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000153675.a.b.a	ENSGT00940000159654	ENSGT00390000006113	ENSGT00940000160929	ENSGT00530000063882.a
Characiphysae	ANCESTRAL SPECIES	100	ENSGT00940000154543.d	ENSGT00390000013253	ENSGT00950000183053.C.a	ENSGT00940000161664	ENSGT00940000155314.o	ENSGT00940000155314.p	ENSGT00940000158776	ENSGT00390000017874.a	ENSGT00390000009989	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT01030000235220	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195.c	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000153675.a.b.a	ENSGT00940000159654	ENSGT00390000006113	ENSGT00940000160929	ENSGT00530000063882.a
Channel catfish	MODERN SPECIES	13	pdrg1 (ENSIPUG00000004692)	ENSIPUG00000004685	znf831 (ENSIPUG00000004679)	hp1bp3 (ENSIPUG00000004659)	sh2d5 (ENSIPUG00000004644)	kif17 (ENSIPUG00000004629)	ENSIPUG00000004621	yod1 (ENSIPUG00000004608)	snrpe (ENSIPUG00000004562)	sox13 (ENSIPUG00000004512)	ETNK1 (ENSIPUG00000004458)	ENSIPUG00000004439	ENSIPUG00000004420	slc41a1 (ENSIPUG00000004308) #28	ENSIPUG00000004277	CDK18 (ENSIPUG00000004225) #22	mfsd4a (ENSIPUG00000004206) #23	elk4 (ENSIPUG00000004174) #24	ENSIPUG00000004168	slc45a3 (ENSIPUG00000004155) #25	NUCKS1 (ENSIPUG00000004127) #26	epha8 (ENSIPUG00000004065)	cldn19 (ENSIPUG00000004037)	ENSIPUG00000004031	slc45a1 (ENSIPUG00000004009) ##25	fam213b (ENSIPUG00000003991)	mmel1 (ENSIPUG00000003918)	miip (ENSIPUG00000003907)	tnfrsf1b (ENSIPUG00000003894)	trim62 (ENSIPUG00000003884)	znf362a (ENSIPUG00000003878)
Characiphysae_b	ANCESTRAL SPECIES	110	ENSGT00940000154543.d	ENSGT00390000013253	ENSGT00950000183053.C.a	ENSGT00940000161664	ENSGT00940000155314.o	ENSGT00940000155314.p	ENSGT00940000158776	ENSGT00390000017874.a	ENSGT00390000009989	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT01030000235220	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195.c	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000153675.a.b.a	ENSGT00940000159654	ENSGT00390000006113	ENSGT00940000160929	ENSGT00530000063882.a
Characoidei	ANCESTRAL SPECIES	103	ENSGT00940000154543.d	ENSGT00390000013253	ENSGT00950000183053.C.a	ENSGT00940000161664	ENSGT00940000155314.o	ENSGT00940000155314.p	ENSGT00940000158776	ENSGT00390000017874.a	ENSGT00390000009989	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT01030000235220	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195.c	ENSGT00940000157821.h.b	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000153675.a.b.a	ENSGT00940000159654	ENSGT00390000006113	ENSGT00940000160929
Red-bellied piranha	MODERN SPECIES	239														slc41a1 (ENSPNAG00000011279) #28	ENSPNAG00000001635	CDK18 (ENSPNAG00000011241) #22	mfsd4aa (ENSPNAG00000001608) #23	elk4 (ENSPNAG00000011198) #24	ENSPNAG00000001586	slc45a3 (ENSPNAG00000011173) #25	nucks1a (ENSPNAG00000011163) #26	ENSPNAG00000011131	cldn19 (ENSPNAG00000011075)	P3H1 (ENSPNAG00000011053)	zgc:112255 (ENSPNAG00000011012)	ap5b1 (ENSPNAG00000011006)	cdc42 (ENSPNAG00000010997)	wnt4 (ENSPNAG00000010964)	svbp (ENSPNAG00000010940)	fbxo2 (ENSPNAG00000001471)	PHF13 (ENSPNAG00000010921)
Mexicana tetra	MODERN SPECIES	14	PPP1R3D (ENSAMXG00000025801)	pdrg1 (ENSAMXG00000036912)	ENSAMXG00000032596	znf831 (ENSAMXG00000044020)	hp1bp3 (ENSAMXG00000003203)	sh2d5 (ENSAMXG00000032349)	kif17 (ENSAMXG00000003249)	zgc:158258 (ENSAMXG00000031570)	yod1 (ENSAMXG00000037446)	SNRPE (ENSAMXG00000043656)	sox13 (ENSAMXG00000003325)	etnk2 (ENSAMXG00000003351)	ENSAMXG00000003362	slc41a1 (ENSAMXG00000003381) #28	ENSAMXG00000003403	CDK18 (ENSAMXG00000003426) #22	mfsd4aa (ENSAMXG00000003456) #23	elk4 (ENSAMXG00000003458) #24	ENSAMXG00000003461	slc45a3 (ENSAMXG00000033751) #25	nucks1a (ENSAMXG00000040582) #26	ENSAMXG00000003497	cldn19 (ENSAMXG00000035207)	P3H1 (ENSAMXG00000003540)	zgc:112255 (ENSAMXG00000003571)	ap5b1 (ENSAMXG00000039124)	cdc42 (ENSAMXG00000035025)	wnt4 (ENSAMXG00000032545)	svbp (ENSAMXG00000033412)	fbxo2 (ENSAMXG00000031920)	PHF13 (ENSAMXG00000003612)
Electric eel	MODERN SPECIES	17	pdrg1 (ENSEEEG00000012746)	ENSEEEG00000012739	ENSEEEG00000012736	ENSEEEG00000012734	hp1bp3 (ENSEEEG00000012732)	sh2d5 (ENSEEEG00000012730)	ENSEEEG00000012723	zgc:158258 (ENSEEEG00000012714)	yod1 (ENSEEEG00000012711)	snrpe (ENSEEEG00000012703)	sox13 (ENSEEEG00000012701)	etnk2 (ENSEEEG00000012697)	ENSEEEG00000012694	slc41a1 (ENSEEEG00000012614) #28	ENSEEEG00000012611	CDK18 (ENSEEEG00000011214) #22	mfsd4aa (ENSEEEG00000011196) #23	elk4 (ENSEEEG00000011193) #24	ENSEEEG00000011188	slc45a3 (ENSEEEG00000011187) #25	nucks1a (ENSEEEG00000011185) #26	ENSEEEG00000010893	cldn19 (ENSEEEG00000010876)	P3H1 (ENSEEEG00000010871)	zgc:112255 (ENSEEEG00000010869)
Cyprinoidei	ANCESTRAL SPECIES	27	ENSGT00940000167672	ENSGT00650000093320.a.b.b.a	ENSGT00620000087961.a.b.a.a.a.b.b.b	ENSGT00940000155314.o	ENSGT00940000155314.p	ENSGT00940000158776	ENSGT00390000017874.a	ENSGT00390000009989	ENSGT00390000012818	ENSGT00940000158759	ENSGT00950000182939.b.a.a	ENSGT01030000235220	ENSGT00950000183042.a.a #28	ENSGT00940000166776	ENSGT00940000178431	ENSGT00940000159482 #22	ENSGT00530000063320.A.i #23	ENSGT00940000158900 #24	ENSGT00940000166195	ENSGT00950000182914.b #25	ENSGT00940000153414.B #26	ENSGT00940000156266	ENSGT00940000158624	ENSGT00940000158725	ENSGT00390000003084	ENSGT00530000064721	ENSGT00940000153675.a.b.a	ENSGT00940000159654	ENSGT00940000159408.p	ENSGT00390000006113	ENSGT00940000160929
Zebrafish	MODERN SPECIES	2	ENSDARG00000099902	ENSDARG00000099989	ERC2 (ENSDARG00000105178)	BSN (ENSDARG00000079161)	hp1bp3 (ENSDARG00000044669)	sh2d5 (ENSDARG00000014324)	kif17 (ENSDARG00000055238)	zgc:158258 (ENSDARG00000070229)	yod1 (ENSDARG00000008542)	snrpe (ENSDARG00000033175)	sox13 (ENSDARG00000030297)	etnk2 (ENSDARG00000070213)	ENSDARG00000079765	slc41a1 (ENSDARG00000070214) #28	ENSDARG00000061000	CDK18 (ENSDARG00000012204) #22	mfsd4aa (ENSDARG00000023768) #23	elk4 (ENSDARG00000077092) #24	ENSDARG00000090914	slc45a3 (ENSDARG00000075975) #25	nucks1a (ENSDARG00000078473) #26	ENSDARG00000095098	ENSDARG00000079459	ENSDARG00000093703	ENSDARG00000095576	ENSDARG00000095775	cldn19 (ENSDARG00000044569)	P3H1 (ENSDARG00000071212)	C11H1orf50 (ENSDARG00000071211)	ap5b1 (ENSDARG00000078805)	cdc42 (ENSDARG00000044573)
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	107	ENSGT00940000166195.a	ENSGT00950000182914.b.nb.b #25	ENSGT00940000153414.B.rb.a.a #26	ENSGT00940000156266.k	ENSGT00940000158624.d	ENSGT00940000158725.d	ENSGT00390000003084.cb	ENSGT00530000064721.b	ENSGT00940000153675.a.a.a.b	ENSGT00940000159654.bb	ENSGT00950000182939.b.a.a.a	ENSGT01030000235220.b	ENSGT00950000183042.a.a.g.b #28	ENSGT00940000166776.a	ENSGT00940000178431	ENSGT00940000159482.g.a #22	ENSGT00530000063320.A.i.b #23	ENSGT00940000158900.m #24	ENSGT00940000166195.b	ENSGT00950000182914.b.nb.a #25	ENSGT00940000153414.B.rb.a.b #26	ENSGT00940000156266.l	ENSGT00940000158624.c	ENSGT00940000158725.c	ENSGT00390000003084.bb	ENSGT00530000064721.a	ENSGT00940000153675.a.b.a	ENSGT00940000159654.cb	ENSGT00390000006113	ENSGT00940000160929.c	ENSGT00530000063882.a.e.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	29	PHF13 (ENSCARG00000026816)	DNAJC11 (ENSCARG00000026824)	vamp3 (ENSCARG00000027120)	per3 (ENSCARG00000006116)	uts2b (ENSCARG00000006854)	ENSCARG00000006891	ENSCARG00000006911	ENSCARG00000006916	EMP3 (ENSCARG00000006930)	znf362a (ENSCARG00000006934)	trim62.1 (ENSCARG00000006942)	tnfrsf1b (ENSCARG00000006957)	zgc:158258 (ENSCARG00000006994)	sh2d5 (ENSCARG00000006999)	hp1bp3 (ENSCARG00000007017)	CDK18 (ENSCARG00000007139) #22	elk4 (ENSCARG00000007854) #24	mfsd4aa (ENSCARG00000007873) #23	ENSCARG00000007913	slc45a3 (ENSCARG00000007915) #25	ENSCARG00000007924	TMC8 (ENSCARG00000007930)	syngr2b (ENSCARG00000007944)	tk1 (ENSCARG00000007951)	cant1b (ENSCARG00000007957)	cant1b (ENSCARG00000007965)	ENSCARG00000007975	ldb1b (ENSCARG00000007998)	ENSCARG00000008059	ENSCARG00000008076	tk1 (ENSCARG00000008098)
Goldfish	MODERN SPECIES	29	itih3b.2 (ENSCARG00000024682)	itih3b.2 (ENSCARG00000024790)	ENSCARG00000024876	ERC2 (ENSCARG00000024896)	BSN (ENSCARG00000024984)	hp1bp3 (ENSCARG00000025012)	sh2d5 (ENSCARG00000025087)	zgc:158258 (ENSCARG00000025109)	yod1 (ENSCARG00000025143)	snrpe (ENSCARG00000025169)	sox13 (ENSCARG00000025246)	etnk2 (ENSCARG00000025311)	ENSCARG00000025324	slc41a1 (ENSCARG00000025344) #28	ENSCARG00000025513	CDK18 (ENSCARG00000025550) #22	mfsd4aa (ENSCARG00000025861) #23	elk4 (ENSCARG00000025941) #24	ENSCARG00000025962	slc45a3 (ENSCARG00000025984) #25	nucks1a (ENSCARG00000026013) #26	ENSCARG00000026080	cldn19 (ENSCARG00000026305)	P3H1 (ENSCARG00000026343)	zgc:112255 (ENSCARG00000026671)	ap5b1 (ENSCARG00000026695)	cdc42 (ENSCARG00000026704)	wnt4 (ENSCARG00000026727)	svbp (ENSCARG00000026801)	fbxo2 (ENSCARG00000026807)	PHF13 (ENSCARG00000026816)
Cyprininae_a	ANCESTRAL SPECIES	3	ENSGT00940000167672	ENSGT00650000093320.a.b.b.a.a	ENSGT00620000087961.a.b.a.a.a.b.b.b.b	ENSGT00940000155314.o.a	ENSGT00940000155314.p.b	ENSGT01030000238086	ENSGT00390000017874.a.b	ENSGT00390000009989.c	ENSGT00390000012818	ENSGT00940000158759.h	ENSGT00950000182939.b.a.a.a	ENSGT01030000235220.b	ENSGT00950000183042.a.a.g.b #28	ENSGT00940000166776.a	ENSGT00940000178431	ENSGT00940000159482.g.a #22	ENSGT00530000063320.A.i.b #23	ENSGT00940000158900.m #24	ENSGT00940000166195.b	ENSGT00950000182914.b.nb.a #25	ENSGT00940000153414.B.rb.a.b #26	ENSGT00940000156266.l	ENSGT00940000158624.c	ENSGT00940000158725.c	ENSGT00390000003084.bb	ENSGT00530000064721.a	ENSGT00940000153675.a.b.b	ENSGT00940000159654.cb	ENSGT00390000006113.a	ENSGT00940000160929.c	ENSGT00530000063882.a.e.b
Golden-line barbel	MODERN SPECIES	43	itih3b.1 (ENSSGRG00000039567)	ENSSGRG00000039616	ERC2 (ENSSGRG00000039619)	BSN (ENSSGRG00000039629)	sh2d5 (ENSSGRG00000039633)	ENSSGRG00000039635	zgc:158258 (ENSSGRG00000039638)	yod1 (ENSSGRG00000039639)	snrpe (ENSSGRG00000039640)	sox13 (ENSSGRG00000039643)	etnk2 (ENSSGRG00000039644)	ENSSGRG00000039645	ENSSGRG00000039647	ENSSGRG00000039648	ENSSGRG00000039650	CDK18 (ENSSGRG00000039651) #22	mfsd4aa (ENSSGRG00000039654) #23	elk4 (ENSSGRG00000039658) #24	ENSSGRG00000039660	slc45a3 (ENSSGRG00000039661) #25	ENSSGRG00000039665	cldn19 (ENSSGRG00000039778)	P3H1 (ENSSGRG00000039780)	zgc:112255 (ENSSGRG00000039781)	ap5b1 (ENSSGRG00000039783)	cdc42 (ENSSGRG00000039788)	wnt4 (ENSSGRG00000039887)	svbp (ENSSGRG00000039924)	fbxo2 (ENSSGRG00000039925)	PHF13 (ENSSGRG00000039928)	DNAJC11 (ENSSGRG00000039935)
Common carp reference	MODERN SPECIES	42	ENSCCRG00000025299	ENSCCRG00000030957	ENSCCRG00000046853	ENSCCRG00000018088	ENSCCRG00000064929	hp1bp3 (ENSCCRG00000049581)	sh2d5 (ENSCCRG00000049585)	zgc:158258 (ENSCCRG00000073140)	yod1 (ENSCCRG00000064850)	SNRPE (ENSCCRG00000049601)	sox13 (ENSCCRG00000049614)	etnk2 (ENSCCRG00000060388)	ENSCCRG00000045090	slc41a1 (ENSCCRG00000044916) #28	ENSCCRG00000021274	CDK18 (ENSCCRG00000022736) #22	mfsd4aa (ENSCCRG00000022751) #23	elk4 (ENSCCRG00000000701) #24	ENSCCRG00000000719	slc45a3 (ENSCCRG00000046125) #25	nucks1a (ENSCCRG00000000751) #26	ENSCCRG00000078033	cldn19 (ENSCCRG00000071031)	ENSCCRG00000025688	zgc:112255 (ENSCCRG00000071185)	ap5b1 (ENSCCRG00000070598)	ENSCCRG00000060239	wnt4 (ENSCCRG00000025737)	svbp (ENSCCRG00000008072)	fbxo2 (ENSCCRG00000064470)	PHF13 (ENSCCRG00000062318)
Cyprininae	ANCESTRAL SPECIES	107	ENSGT00940000168503.A.b	ENSGT00940000167672	ENSGT00650000093320.a.b.b.a.b	ENSGT00620000087961.a.b.a.a.a.b.b.b.a	ENSGT00940000155314.o.b	ENSGT00940000155314.p.a	ENSGT00940000158776	ENSGT00390000017874.a.a	ENSGT00390000009989.d	ENSGT00390000012818	ENSGT00940000158759.g	ENSGT00950000182939.b.a.a.b	ENSGT01030000235220.a	ENSGT00950000183042.a.a.g.a #28	ENSGT00940000166776.b	ENSGT00940000159482.g.b #22	ENSGT00530000063320.A.i.a #23	ENSGT00940000158900.n #24	ENSGT00940000166195.a	ENSGT00950000182914.b.nb.b #25	ENSGT00940000153414.B.rb.a.a #26	ENSGT00940000156266.k	ENSGT00940000158624.d	ENSGT00940000158725.d	ENSGT00390000003084.cb	ENSGT00530000064721.b	ENSGT00940000153675.a.a.a.b	ENSGT00940000159654.bb	ENSGT00950000182939.b.a.a.a	ENSGT01030000235220.b	ENSGT00950000183042.a.a.g.b #28
Goldfish	MODERN SPECIES	2	ENSCARG00000022576	ENSCARG00000022583	ERC2 (ENSCARG00000022595)	BSN (ENSCARG00000022628)	hp1bp3 (ENSCARG00000022644)	sh2d5 (ENSCARG00000022685)	kif17 (ENSCARG00000022697)	zgc:158258 (ENSCARG00000022707)	yod1 (ENSCARG00000022712)	SNRPE (ENSCARG00000022723)	sox13 (ENSCARG00000022763)	etnk2 (ENSCARG00000022800)	ENSCARG00000022811	slc41a1 (ENSCARG00000022821) #28	ENSCARG00000022850	CDK18 (ENSCARG00000022908) #22	mfsd4aa (ENSCARG00000023915) #23	elk4 (ENSCARG00000023952) #24	ENSCARG00000023974	slc45a3 (ENSCARG00000023981) #25	nucks1a (ENSCARG00000023998) #26	ENSCARG00000024067	cldn19 (ENSCARG00000024148)	P3H1 (ENSCARG00000024203)	zgc:112255 (ENSCARG00000025913)	ap5b1 (ENSCARG00000025942)	CDC42 (ENSCARG00000025952)	wnt4 (ENSCARG00000025981)	ENSCARG00000026064	PHF13 (ENSCARG00000026076)	DNAJC11 (ENSCARG00000026106)
Cyprininae_a	ANCESTRAL SPECIES	9	ENSGT00940000154471.a.b.a.a.b.a.h	ENSGT00940000164282.b.a	ENSGT00940000158892.b.i.a.b	ENSGT00650000093320.a.b.b.a.b	ENSGT00620000087961.a.b.a.a.a.b.b.b.a	ENSGT00940000155314.o.b	ENSGT00940000155314.p.a	ENSGT00940000158776	ENSGT00390000017874.a.a	ENSGT00390000009989.d	ENSGT00940000158759.g	ENSGT00950000182939.b.a.a.b	ENSGT01030000235220.a	ENSGT00950000183042.a.a.g.a #28	ENSGT00940000166776.b	ENSGT00940000159482.g.b #22	ENSGT00530000063320.A.i.a #23	ENSGT00940000158900.n #24	ENSGT00940000166195.a	ENSGT00950000182914.b.nb.b #25	ENSGT00940000153414.B.rb.a.a #26	ENSGT00940000156266.k	ENSGT00940000158624.d	ENSGT00940000158725.d	ENSGT00390000003084.cb	ENSGT00530000064721.b	ENSGT00940000153675.a.b.a	ENSGT00940000159654.bb	ENSGT00390000006113.b	ENSGT00940000160929.d	ENSGT00530000063882.a.e.a.a
Common carp reference	MODERN SPECIES	13	ENSCCRG00000078114	ENSCCRG00000075249	ENSCCRG00000018169	ENSCCRG00000033937	ENSCCRG00000033957	hp1bp3 (ENSCCRG00000049633)	sh2d5 (ENSCCRG00000050535)	kif17 (ENSCCRG00000050538)	yod1 (ENSCCRG00000073784)	snrpe (ENSCCRG00000068887)	sox13 (ENSCCRG00000050544)	etnk2 (ENSCCRG00000032588)	ENSCCRG00000066276	slc41a1 (ENSCCRG00000079436) #28	ENSCCRG00000067742	CDK18 (ENSCCRG00000062061) #22	mfsd4aa (ENSCCRG00000000684) #23	elk4 (ENSCCRG00000053191) #24	ENSCCRG00000022761	slc45a3 (ENSCCRG00000022765) #25	nucks1a (ENSCCRG00000073088) #26	ENSCCRG00000077377	cldn19 (ENSCCRG00000066287)	ENSCCRG00000068255	zgc:112255 (ENSCCRG00000067875)	ap5b1 (ENSCCRG00000025788)	cdc42 (ENSCCRG00000025714)	wnt4 (ENSCCRG00000035575)	svbp (ENSCCRG00000067892)	fbxo2 (ENSCCRG00000055156)	PHF13 (ENSCCRG00000063191)
Golden-line barbel	MODERN SPECIES	2	itih3b.2 (ENSSGRG00000014529)	ERC2 (ENSSGRG00000014545)	BSN (ENSSGRG00000014547)	hp1bp3 (ENSSGRG00000014548)	sh2d5 (ENSSGRG00000014550)	ENSSGRG00000014551	zgc:158258 (ENSSGRG00000014552)	yod1 (ENSSGRG00000014553)	snrpe (ENSSGRG00000014556)	sox13 (ENSSGRG00000014573)	ENSSGRG00000014575	etnk2 (ENSSGRG00000014580)	etnk2 (ENSSGRG00000014582)	ENSSGRG00000014583	ENSSGRG00000014585	CDK18 (ENSSGRG00000014587) #22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000159482.h #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000159482.h #22
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	3588																ENSSGRG00000006115 #22
Golden-line barbel	MODERN SPECIES	1984															ENSSGRG00000017549	ENSSGRG00000017650 #22
Elephant shark	MODERN SPECIES	2434																ENSCMIG00000006834 #22	ENSCMIG00000006827
Ciona	ANCESTRAL SPECIES																	ENSGT00940000159482 #22
Ciona intestinalis	MODERN SPECIES	9	ENSCING00000012119	ENSCING00000012120	ENSCING00000012121	ENSCING00000009170	ENSCING00000012122	ENSCING00000021252	ENSCING00000012124	ENSCING00000019994	ENSCING00000018399	ENSCING00000009162	ENSCING00000020812	ENSCING00000019136	ENSCING00000012125	ENSCING00000024416	ENSCING00000024766	ENSCING00000022452 #22	ENSCING00000009173	ENSCING00000022763	ENSCING00000009174	ENSCING00000021382	ENSCING00000009181	ENSCING00000012118	ENSCING00000009182	ENSCING00000024296	ENSCING00000009183	ENSCING00000009849	ENSCING00000019236	ENSCING00000009184	ENSCING00000012117	ENSCING00000022053	ENSCING00000009185