Clupeocephala	ANCESTRAL SPECIES	12	ENSGT00940000155386.a	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000163566.a.b.a.a	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000160720.b.a	ENSGT00940000153510.a	ENSGT00940000156686	ENSGT00390000007786.a.b	ENSGT01050000244893.c.b.b.b	ENSGT00390000015826	ENSGT00940000163861.a	ENSGT00940000163144.a.a.b	ENSGT00940000163144.a.b	ENSGT00940000167161
Otomorpha	ANCESTRAL SPECIES	4	ENSGT00940000163566.a.b.a.a	ENSGT00950000182803.A.a.b.l	ENSGT00940000163566.a.b.b	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT00390000005412 #22	ENSGT00940000153578.A.e ##20	ENSGT00940000154705.A.a	ENSGT00940000155563.k.a	ENSGT01050000244891.E.a.b	ENSGT00940000154830.c	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000160720.b.a	ENSGT00390000000463.a	ENSGT00950000182933.B.b	ENSGT00940000157338.a	ENSGT00940000157228.i.a	ENSGT00940000156104.B
Otophysi	ANCESTRAL SPECIES	8	ENSGT00940000155386.a	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000163566.a.b.a.a	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.a.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000160720.b.a	ENSGT00390000000463.a	ENSGT00950000182933.B.b	ENSGT00940000157338.a	ENSGT00940000157228.i.a	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000153510.a
Cyprinoidei	ANCESTRAL SPECIES	206							ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00390000005412 #22	ENSGT00390000009760 #23
Cyprininae	ANCESTRAL SPECIES	470	ENSGT00940000160913.o #7	ENSGT00940000160049 #8	ENSGT00940000156448.a.a.b #9	ENSGT00950000183091.B.a.a #10	ENSGT00940000158931 #11	ENSGT00390000001414 #12	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00390000005412 #22	ENSGT00390000009760.g #23
Cyprininae_a	ANCESTRAL SPECIES	10	ENSGT00940000160049 #8	ENSGT00940000156448.a.a.b #9	ENSGT00950000183091.B.a.a #10	ENSGT00940000158931.j #11	ENSGT00390000001414 #12	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00390000005412 #22	ENSGT00390000009760.g #23	ENSGT00940000155386.a	ENSGT01060000248591.a.a.b.a.b.b	ENSGT00640000091541.ab	ENSGT00390000011880	ENSGT01060000248591.a.a.b.a.b.a	ENSGT00640000091541.`b	ENSGT01070000253837.c.b	ENSGT00940000157351.b	ENSGT00940000159603.b.b	ENSGT00940000161850.r.a.b	ENSGT00550000075186	ENSGT00440000035688.g	ENSGT00940000160777.i.b	ENSGT00940000160777.i.a
Golden-line barbel	MODERN SPECIES	765						cratb (ENSSGRG00000014110)	ENSSGRG00000014106	p3h4 (ENSSGRG00000014104)	aanat1 (ENSSGRG00000014102) #16	RHBDF2 (ENSSGRG00000013793) #17	acox1 (ENSSGRG00000012703) #18	ten1 (ENSSGRG00000012677) #19	evpla (ENSSGRG00000012632) #20	srp68 (ENSSGRG00000012271) #21	POLG2 (ENSSGRG00000012266)	ENSSGRG00000012260 #22
Characiphysae	ANCESTRAL SPECIES	18	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000163566.a.b.a.a	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00940000154622.a.b.s	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.a.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000160720.b.a	ENSGT00390000000463.a	ENSGT00950000182933.B.b	ENSGT00940000157338.a	ENSGT00940000157228.i.a	ENSGT00940000156104.B.m	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000153510.a
Channel catfish	MODERN SPECIES	3	casp8 (ENSIPUG00000013783)	dytn (ENSIPUG00000013845)	casp20 (ENSIPUG00000013871)	catip (ENSIPUG00000013888)	pnkd (ENSIPUG00000013907)	ube2o (ENSIPUG00000013940) #15	ENSIPUG00000014017	aanat (ENSIPUG00000014037) #16	rhbdf2 (ENSIPUG00000014071) #17	Acox1 (ENSIPUG00000014161) #18	ten1 (ENSIPUG00000014240) #19	evpl (ENSIPUG00000014268) #20	SRP68 (ENSIPUG00000014365) #21	polg2 (ENSIPUG00000014424)	ddx5 (ENSIPUG00000014448)	cep95 (ENSIPUG00000014504) #22	SMURF2 (ENSIPUG00000014543)	kpna2 (ENSIPUG00000014666)	ENSIPUG00000014692	bptf (ENSIPUG00000014717)	nol11 (ENSIPUG00000014968) #23	pitpnc1 (ENSIPUG00000015024)	tex2 (ENSIPUG00000015105)	myadm (ENSIPUG00000015201)	axin2 (ENSIPUG00000015211)	APOH (ENSIPUG00000015247)	PRKCA (ENSIPUG00000015287)	cacng5 (ENSIPUG00000015392)	ENSIPUG00000015408	CACNG4 (ENSIPUG00000015418)	CACNG1 (ENSIPUG00000015430)
Characiphysae_b	ANCESTRAL SPECIES	46	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000163566.a.b.a.a	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00940000154622.a.b.s	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.a.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000160720.b.a	ENSGT00390000000463.a	ENSGT00950000182933.B.b	ENSGT00940000157338.a	ENSGT00940000157228.i.a	ENSGT00940000156104.B.m	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000153510.a
Characoidei	ANCESTRAL SPECIES	23	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000163566.a.b.a.a	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00940000154622.a.b.s	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.a.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000160720.b.a	ENSGT00390000000463.a	ENSGT00950000182933.B.b	ENSGT00940000157338.a	ENSGT00940000157228.i.a	ENSGT00940000156104.B.m	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000153510.a
Red-bellied piranha	MODERN SPECIES	25	MGAT5B (ENSPNAG00000028590)	ENSPNAG00000005318	prpsap1 (ENSPNAG00000028660)	cygb2 (ENSPNAG00000028671) #13	SPHK1 (ENSPNAG00000006932) #14	UBE2O (ENSPNAG00000004439) #15	ENSPNAG00000028854	aanat1 (ENSPNAG00000028897) #16	RHBDF2 (ENSPNAG00000005352) #17	acox1 (ENSPNAG00000029060) #18	ten1 (ENSPNAG00000029089) #19	evpla (ENSPNAG00000004536) #20	srp68 (ENSPNAG00000006798) #21	POLG2 (ENSPNAG00000029339)	DDX5 (ENSPNAG00000029431)	CEP95 (ENSPNAG00000006403) #22	SMURF2 (ENSPNAG00000029512)	ENSPNAG00000006405	ENSPNAG00000005002	BPTF (ENSPNAG00000005705)	nol11 (ENSPNAG00000029693) #23	PITPNC1 (ENSPNAG00000029718)	TEX2 (ENSPNAG00000029752)	ENSPNAG00000029764	AXIN2 (ENSPNAG00000029785)	APOH (ENSPNAG00000029795)	prkcaa (ENSPNAG00000029815)	cacng5a (ENSPNAG00000029835)	CACNG4 (ENSPNAG00000029846)	cacng1a (ENSPNAG00000029850)	psmd12 (ENSPNAG00000029865)
Mexicana tetra	MODERN SPECIES	4	prpsap1 (ENSAMXG00000043191)	cygb2 (ENSAMXG00000035429) #13	ENSAMXG00000041726	SPHK1 (ENSAMXG00000015796) #14	UBE2O (ENSAMXG00000015772) #15	ENSAMXG00000036382	aanat1 (ENSAMXG00000015728) #16	ENSAMXG00000035338	RHBDF2 (ENSAMXG00000015710) #17	acox1 (ENSAMXG00000015678) #18	ten1 (ENSAMXG00000037327) #19	evpla (ENSAMXG00000015605) #20	srp68 (ENSAMXG00000035069) #21	POLG2 (ENSAMXG00000030889)	DDX5 (ENSAMXG00000015550)	CEP95 (ENSAMXG00000015514) #22	SMURF2 (ENSAMXG00000015460)	ENSAMXG00000015416	ENSAMXG00000015395	BPTF (ENSAMXG00000015334)	nol11 (ENSAMXG00000015289) #23	PITPNC1 (ENSAMXG00000015250)	TEX2 (ENSAMXG00000015207)	ENSAMXG00000026305	AXIN2 (ENSAMXG00000015178)	ENSAMXG00000000747	manbal (ENSAMXG00000038402)	SYT2 (ENSAMXG00000000707)	mybphb (ENSAMXG00000000680)	NAV1 (ENSAMXG00000000662)	csrp1b (ENSAMXG00000031677)
Electric eel	MODERN SPECIES	335							ENSEEEG00000003835	ENSEEEG00000003836	aanat1 (ENSEEEG00000003837) #16	RHBDF2 (ENSEEEG00000003838) #17	acox1 (ENSEEEG00000003842) #18	ten1 (ENSEEEG00000003873) #19	evpla (ENSEEEG00000003875) #20	srp68 (ENSEEEG00000003888) #21	DDX5 (ENSEEEG00000004119)	ENSEEEG00000005283 #22	SMURF2 (ENSEEEG00000005298)	ENSEEEG00000005438	ENSEEEG00000005442	BPTF (ENSEEEG00000005468)	nol11 (ENSEEEG00000005614) #23	PITPNC1 (ENSEEEG00000005617)	TEX2 (ENSEEEG00000005624)	ENSEEEG00000005629	AXIN2 (ENSEEEG00000005635)	ENSEEEG00000005660
Clupeiformes	ANCESTRAL SPECIES	82	ENSGT00940000155386.a	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000163566.a.b.a.a	ENSGT00950000182803.A.a.b.l	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT00390000005412 #22	ENSGT00940000155563.l	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000160720.b.a	ENSGT00390000000463.a	ENSGT00950000182933.B.b	ENSGT00940000157338.a
Atlantic herring	MODERN SPECIES	18	aanat1 (ENSCHAG00000015652) #16	RHBDF2 (ENSCHAG00000015673) #17	acox1 (ENSCHAG00000015871) #18	ten1 (ENSCHAG00000016589) #19	evpla (ENSCHAG00000016602) #20	srp68 (ENSCHAG00000016758) #21	POLG2 (ENSCHAG00000016902)	acox1 (ENSCHAG00000016996) #18	RHBDF2 (ENSCHAG00000018477) #17	RHBDF2 (ENSCHAG00000018618) #17	srp68 (ENSCHAG00000018784) #21	ENSCHAG00000018864	ENSCHAG00000019018	DDX5 (ENSCHAG00000019087)	ENSCHAG00000019623	ENSCHAG00000019681 #22	SMURF2 (ENSCHAG00000019736)	ENSCHAG00000021322	ENSCHAG00000021348	BPTF (ENSCHAG00000021387)	nol11 (ENSCHAG00000021822) #23	PITPNC1 (ENSCHAG00000021899)	TEX2 (ENSCHAG00000022001)	ENSCHAG00000022023	AXIN2 (ENSCHAG00000022028)	APOH (ENSCHAG00000022052)	ENSCHAG00000022057	prkcaa (ENSCHAG00000022082)	CACNG5 (ENSCHAG00000022869)	CACNG4 (ENSCHAG00000002678)	CACNG1 (ENSCHAG00000002770)
Denticle herring	MODERN SPECIES	13	NTAN1 (ENSDCDG00000031697)	ddx17 (ENSDCDG00000031724) #8	ENSDCDG00000032147	PRPSAP1 (ENSDCDG00000032148)	cygb2 (ENSDCDG00000032167) #13	SPHK1 (ENSDCDG00000032173) #14	UBE2O (ENSDCDG00000032187) #15	AANAT (ENSDCDG00000032285) ##16	RHBDF2 (ENSDCDG00000032294) #17	acox1 (ENSDCDG00000032412) #18	ten1 (ENSDCDG00000033076) #19	evpla (ENSDCDG00000033082) #20	srp68 (ENSDCDG00000033093) #21	POLG2 (ENSDCDG00000033143)	DDX5 (ENSDCDG00000033167)	CEP95 (ENSDCDG00000033186) #22	SMURF2 (ENSDCDG00000033228)	ENSDCDG00000033710	C17orf58 (ENSDCDG00000033713)	BPTF (ENSDCDG00000033721)	nol11 (ENSDCDG00000033731) #23	ENSDCDG00000033746	TEX2 (ENSDCDG00000033773)	ENSDCDG00000033793	AXIN2 (ENSDCDG00000033797)	ENSDCDG00000033802	APOH (ENSDCDG00000033805)	prkcaa (ENSDCDG00000033838)	cacng5a (ENSDCDG00000034053)	CACNG4 (ENSDCDG00000034054)	cacng1a (ENSDCDG00000034055)
Euteleosteomorpha	ANCESTRAL SPECIES	18	ENSGT00940000153470.a.b.b.m.a	ENSGT00740000117013	ENSGT00940000163566.a.b.a.a	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000160720.b.a	ENSGT00940000175870	ENSGT00940000163128.a	ENSGT00940000153510.a	ENSGT00940000156686	ENSGT00940000167917	ENSGT00390000007786.a.a	ENSGT01050000244893.c.b.b.a	ENSGT01050000244961.a.a.a	ENSGT00940000163520.A.a.a.a.a.a.a.h
Acanthomorphata	ANCESTRAL SPECIES	40	ENSGT00940000163460.b	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000163566.a.b.a.a	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23
Euacanthomorphacea	ANCESTRAL SPECIES	3	ENSGT00940000153470.a.b.b.m.a	ENSGT00940000163566.a.b.a.a	ENSGT00950000182803.A.a.b.k.a	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.a.b.b.a.a.b.a.a	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.b	ENSGT00940000155217.p	ENSGT00940000163520.A.a.a.b	ENSGT00980000199396	ENSGT00940000157228.i.a	ENSGT00940000156104.B	ENSGT00950000183116.b.a.a.b.a.b	ENSGT00940000163520.A.a.a.a.a.a.a.h	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a
Percomorphaceae	ANCESTRAL SPECIES	20					ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000155217.p	ENSGT00940000163520.A.a.a.b	ENSGT00980000199396	ENSGT00940000156104.B	ENSGT00950000183116.b.a.a.b.a.b	ENSGT00940000163520.A.a.a.a.a.a.a.h	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00940000155159.C	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT00390000005412 #22	ENSGT01030000235173	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000155217.p	ENSGT00940000163520.A.a.a.b.c	ENSGT00940000156104.B	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.b	ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT00390000005412 #22	ENSGT01030000235173	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000155217.p	ENSGT00940000163520.A.a.a.b.c	ENSGT00940000156104.B	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.b	ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a
Ballan wrasse	MODERN SPECIES	105	ENSLBEG00000019918	ENSLBEG00000019834	ENSLBEG00000019815	ENSLBEG00000019800	TESK1 (ENSLBEG00000019763)	tmx2b (ENSLBEG00000019721)	zdhhc5a (ENSLBEG00000019701)	slc43a1b (ENSLBEG00000019643)	ENSLBEG00000019570	pold4 (ENSLBEG00000019540)	p2rx3b (ENSLBEG00000019497)	ENSLBEG00000019482	ENSLBEG00000019464	ENSLBEG00000019454	ENSLBEG00000019378	ENSLBEG00000019344 #22	ENSLBEG00000019265
Eupecaria_C	ANCESTRAL SPECIES	22												ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.r	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.f	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720.b.a	ENSGT00390000011517.a.a.c.a.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	21													ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.r	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720.b.a	ENSGT00390000011517.a.a.c.a.b
Gilthead seabream	MODERN SPECIES		ENSSAUG00010000954	ENSSAUG00010000955	ENSSAUG00010000957	ENSSAUG00010000958	ENSSAUG00010000960	ENSSAUG00010000963	ENSSAUG00010000964	ENSSAUG00010000965	ENSSAUG00010000967	ENSSAUG00010000969	ENSSAUG00010000970	ENSSAUG00010000973	ENSSAUG00010000974	ENSSAUG00010000976	ENSSAUG00010000977 #22	ENSSAUG00010000980 #22	SMURF2 (ENSSAUG00010001001)	ENSSAUG00010002267	ENSSAUG00010002302	BPTF (ENSSAUG00010002381)	nol11 (ENSSAUG00010005055) #23	APOH (ENSSAUG00010005301)	APOH (ENSSAUG00010005306)	prkcaa (ENSSAUG00010005316)	cacng5a (ENSSAUG00010005349)	CACNG4 (ENSSAUG00010005350)	cacng1a (ENSSAUG00010005351)	helz (ENSSAUG00010005420)	PSMD12 (ENSSAUG00010006905)	ENSSAUG00010006926	PITPNC1 (ENSSAUG00010006930)
Perciformes	ANCESTRAL SPECIES	2	ENSGT00940000155159.C	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.r	ENSGT00940000170606.f	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a
Cottioidei	ANCESTRAL SPECIES	3	ENSGT00940000155858.f	ENSGT00940000155159.C	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.r	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a
Lumpfish	MODERN SPECIES		cygb2 (ENSCLMG00005022933) #13	SPHK1 (ENSCLMG00005022934) #14	UBE2O (ENSCLMG00005022937) #15	aanat1 (ENSCLMG00005022944) #16	RHBDF2 (ENSCLMG00005022947) #17	acox1 (ENSCLMG00005022970) #18	ten1 (ENSCLMG00005022998) #19	evpla (ENSCLMG00005023002) #20	srp68 (ENSCLMG00005023011) #21	POLG2 (ENSCLMG00005023014)	DDX5 (ENSCLMG00005023023)	ENSCLMG00005023041	ENSCLMG00005023043	ENSCLMG00005023044	ENSCLMG00005023046	CEP95 (ENSCLMG00005023048) #22	SMURF2 (ENSCLMG00005023061)	ENSCLMG00005023066	C17orf58 (ENSCLMG00005023069)	BPTF (ENSCLMG00005023092)	nol11 (ENSCLMG00005023102) #23	APOH (ENSCLMG00005023106)	APOH (ENSCLMG00005023109)	PRKCA (ENSCLMG00005023122)	cacng5a (ENSCLMG00005023127)	CACNG4 (ENSCLMG00005023128)	CACNG1 (ENSCLMG00005023129)	ENSCLMG00005023130	ENSCLMG00005023132	psmd12 (ENSCLMG00005023133)	ENSCLMG00005023135
Stickleback	MODERN SPECIES	4	SMAP1 (ENSGACG00000018297)	cenpk (ENSGACG00000018295)	lbx1b (ENSGACG00000018293)	slc2a15b (ENSGACG00000018278)	fgf8b (ENSGACG00000018276)	dpcd (ENSGACG00000018274)	poll (ENSGACG00000018272)	wbp1lb (ENSGACG00000018270)	as3mt (ENSGACG00000018262)	CNNM2 (ENSGACG00000018261)	ENSGACG00000018260	nt5c2b (ENSGACG00000018247)	inab (ENSGACG00000018244)	taf5 (ENSGACG00000018238)	pdcd11 (ENSGACG00000018233)	ENSGACG00000018230 #22	SMURF2 (ENSGACG00000018228)	ENSGACG00000018226	ENSGACG00000018225	TEX2 (ENSGACG00000018223)	ccdc40 (ENSGACG00000018222)	ENSGACG00000018220	CBX4 (ENSGACG00000018219)	cbx8b (ENSGACG00000018216)	si:dkey-31g6.6 (ENSGACG00000018215)	dgke (ENSGACG00000018212)	trim25 (ENSGACG00000018210)	trim25 (ENSGACG00000018208)	ENSGACG00000018206	ENSGACG00000018205	ENSGACG00000018202
Perciformes_a	ANCESTRAL SPECIES		ENSGT00940000155858.f	ENSGT00940000155159.C	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.r	ENSGT00940000170606.f	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720.b.a
Pike perch	MODERN SPECIES	8	ENSSLUG00000006398	cygb2 (ENSSLUG00000005934) #13	SPHK1 (ENSSLUG00000005905) #14	ENSSLUG00000005863	aanat1 (ENSSLUG00000005842) #16	RHBDF2 (ENSSLUG00000005795) #17	acox1 (ENSSLUG00000005282) #18	ten1 (ENSSLUG00000005185) #19	evpla (ENSSLUG00000005064) #20	srp68 (ENSSLUG00000014830) #21	POLG2 (ENSSLUG00000014799)	DDX5 (ENSSLUG00000014125)	ENSSLUG00000014088	ENSSLUG00000014082	ENSSLUG00000014076	CEP95 (ENSSLUG00000014055) #22	ENSSLUG00000014046	SMURF2 (ENSSLUG00000012643)	ENSSLUG00000012591	C17orf58 (ENSSLUG00000012588)	BPTF (ENSSLUG00000010494)	nol11 (ENSSLUG00000010366) #23	APOH (ENSSLUG00000010360)	APOH (ENSSLUG00000010356)	ENSSLUG00000010353	ENSSLUG00000010349	prkcaa (ENSSLUG00000010243)	cacng5a (ENSSLUG00000010222)	CACNG4 (ENSSLUG00000010219)	cacng1a (ENSSLUG00000010217)	helz (ENSSLUG00000009388)
Channel bull blenny	MODERN SPECIES		ENSCGOG00000023034 #14	UBE2O (ENSCGOG00000023041) #15	aanat1 (ENSCGOG00000023071) #16	RHBDF2 (ENSCGOG00000023083) #17	acox1 (ENSCGOG00000023144) #18	ten1 (ENSCGOG00000023468) #19	evpla (ENSCGOG00000023476) #20	srp68 (ENSCGOG00000023500) #21	POLG2 (ENSCGOG00000023572)	DDX5 (ENSCGOG00000023657)	ENSCGOG00000024067	ENSCGOG00000024068	ENSCGOG00000024069	ENSCGOG00000024070	ENSCGOG00000024072	ENSCGOG00000024073 #22	ENSCGOG00000024075	SMURF2 (ENSCGOG00000024101)	ENSCGOG00000024203	ENSCGOG00000024223	BPTF (ENSCGOG00000024271)	nol11 (ENSCGOG00000024325) #23	APOH (ENSCGOG00000024330)	APOH (ENSCGOG00000024332)	prkcaa (ENSCGOG00000024390)	ENSCGOG00000024540	cacng5a (ENSCGOG00000024541)	CACNG4 (ENSCGOG00000024543)	cacng1a (ENSCGOG00000024544)	helz (ENSCGOG00000024550)	psmd12 (ENSCGOG00000024579)
Tetraodontidae	ANCESTRAL SPECIES	34	ENSGT00390000009760 #23	ENSGT00940000154830.d	ENSGT00390000002361	ENSGT00940000153846.a.b	ENSGT00390000017614.e.a.f	ENSGT00940000158718.a.a	ENSGT00390000000976.d.a	ENSGT00950000183036.b.e	ENSGT01030000234900	ENSGT00390000009916	ENSGT00940000154990.fb.a	ENSGT00940000158914	ENSGT00940000155632.p	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT00940000168028	ENSGT00940000165127.a	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT00940000163551.i.b	ENSGT00950000183026.A.a.a.b	ENSGT00940000155777.b	ENSGT00390000002918.a.a	ENSGT00940000154466	ENSGT00940000158602
Tetraodon	MODERN SPECIES	10	ENSTNIG00000014128	APOH (ENSTNIG00000014127)	nol11 (ENSTNIG00000014126) #23	BPTF (ENSTNIG00000014125)	pglyrp2 (ENSTNIG00000014122)	EVI5L (ENSTNIG00000014124)	ENSTNIG00000014123	trappc5 (ENSTNIG00000014121)	mcoln1a (ENSTNIG00000014120)	PKN1 (ENSTNIG00000014119)	map2k7 (ENSTNIG00000014118)	myh9a (ENSTNIG00000014117)	ENSTNIG00000014116	ENSTNIG00000001459	ENSTNIG00000000500	ENSTNIG00000014115 #22	SMURF2 (ENSTNIG00000014114)	ENSTNIG00000014113	TESK1 (ENSTNIG00000014112)	hpgd (ENSTNIG00000014111)	ENSTNIG00000014110	ENSTNIG00000002050	GPM6A (ENSTNIG00000014109)	ENSTNIG00000014108	colgalt1b (ENSTNIG00000014107)	nxnl1 (ENSTNIG00000014106)	nxnl1 (ENSTNIG00000014105)	ENSTNIG00000014104	ENSTNIG00000014103	tmed1b (ENSTNIG00000014102)	DNM2 (ENSTNIG00000014101)
Fugu	DUPLICATION
Fugu	DUPLICATION
Fugu	DUPLICATION
Fugu	DUPLICATION
Fugu	MODERN SPECIES	8	trappc5 (ENSTRUG00000025920)	mcoln1a (ENSTRUG00000002835)	ENSTRUG00000023280	si:ch211-214c7.5 (ENSTRUG00000023139)	PKN1 (ENSTRUG00000003489)	myh9a (ENSTRUG00000004910)	ENSTRUG00000019598	ENSTRUG00000032067	ENSTRUG00000021133	ENSTRUG00000027639	ENSTRUG00000030644	ENSTRUG00000026269	ENSTRUG00000025938	ENSTRUG00000032682	ENSTRUG00000030145	ENSTRUG00000031372 #22	ENSTRUG00000026605	ENSTRUG00000024168	ENSTRUG00000028010	ENSTRUG00000028250	ENSTRUG00000028168 #22	SMURF2 (ENSTRUG00000007571)	ENSTRUG00000026199	ENSTRUG00000026766	ENSTRUG00000007952	ENSTRUG00000008193	tmx2b (ENSTRUG00000008236)	zdhhc5a (ENSTRUG00000008381)	ENSTRUG00000008451	pold4 (ENSTRUG00000025461)	p2rx3b (ENSTRUG00000008813)
Fugu	MODERN SPECIES	8	myh9a (ENSTRUG00000004910)	ENSTRUG00000019598	ENSTRUG00000032067	ENSTRUG00000021133	ENSTRUG00000027639	ENSTRUG00000030644	ENSTRUG00000026269	ENSTRUG00000025938	ENSTRUG00000032682	ENSTRUG00000030145	ENSTRUG00000031372 #22	ENSTRUG00000026605	ENSTRUG00000024168	ENSTRUG00000028010	ENSTRUG00000028250	ENSTRUG00000028168 #22	SMURF2 (ENSTRUG00000007571)	ENSTRUG00000026199	ENSTRUG00000026766	ENSTRUG00000007952	ENSTRUG00000008193	tmx2b (ENSTRUG00000008236)	zdhhc5a (ENSTRUG00000008381)	ENSTRUG00000008451	pold4 (ENSTRUG00000025461)	p2rx3b (ENSTRUG00000008813)	ENSTRUG00000009153	ENSTRUG00000009212	mtmr7b (ENSTRUG00000009340)	pmm2 (ENSTRUG00000025052)	hmgb2a (ENSTRUG00000009837)
Fugu	MODERN SPECIES	100															ENSTRUG00000031752	ENSTRUG00000029324 #22	ENSTRUG00000027413	ENSTRUG00000026655	ENSTRUG00000032861	ENSTRUG00000032282 #22	ENSTRUG00000031925	ENSTRUG00000032021	ENSTRUG00000030788	ENSTRUG00000027257	ENSTRUG00000026982	ENSTRUG00000030253	ENSTRUG00000024733	ENSTRUG00000026620 #22
Fugu	MODERN SPECIES	100											ENSTRUG00000031752	ENSTRUG00000029324 #22	ENSTRUG00000027413	ENSTRUG00000026655	ENSTRUG00000032861	ENSTRUG00000032282 #22	ENSTRUG00000031925	ENSTRUG00000032021	ENSTRUG00000030788	ENSTRUG00000027257	ENSTRUG00000026982	ENSTRUG00000030253	ENSTRUG00000024733	ENSTRUG00000026620 #22
Fugu	MODERN SPECIES	100			ENSTRUG00000031752	ENSTRUG00000029324 #22	ENSTRUG00000027413	ENSTRUG00000026655	ENSTRUG00000032861	ENSTRUG00000032282 #22	ENSTRUG00000031925	ENSTRUG00000032021	ENSTRUG00000030788	ENSTRUG00000027257	ENSTRUG00000026982	ENSTRUG00000030253	ENSTRUG00000024733	ENSTRUG00000026620 #22
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT00390000005412 #22	ENSGT01030000235173	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000163520.A.a.a.b.c	ENSGT00940000156104.B	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686
Carangaria	ANCESTRAL SPECIES		ENSGT00390000000159	ENSGT00940000155858.f	ENSGT00940000155159.C	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.b	ENSGT00390000005412 #22	ENSGT01030000235173.a.a	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000163520.A.a.a.b.c	ENSGT00940000156104.B	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686
Pleuronectoidei	ANCESTRAL SPECIES	21	ENSGT00940000155858.f	ENSGT00940000155159.C	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT00940000180132	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT00390000005412 #22
Turbot	MODERN SPECIES	20	ENSSMAG00000017438 #13	SPHK1 (ENSSMAG00000017451) #14	UBE2O (ENSSMAG00000017525) #15	aanat1 (ENSSMAG00000017595) #16	RHBDF2 (ENSSMAG00000017610) #17	acox1 (ENSSMAG00000017686) #18	ten1 (ENSSMAG00000037178) #19	evpla (ENSSMAG00000017734) #20	srp68 (ENSSMAG00000017805) #21	POLG2 (ENSSMAG00000017857)	ENSSMAG00000017903	ENSSMAG00000017987	ENSSMAG00000034913	ENSSMAG00000017992	ENSSMAG00000026809	CEP95 (ENSSMAG00000018019) #22	ENSSMAG00000018058	ENSSMAG00000018086	ENSSMAG00000031026	ENSSMAG00000018193	NOL11 (ENSSMAG00000018239) #23	APOH (ENSSMAG00000018248)	APOH (ENSSMAG00000018259)	PRKCA (ENSSMAG00000018270)	cacng5a (ENSSMAG00000018286)	CACNG4 (ENSSMAG00000018294)	CACNG1 (ENSSMAG00000018315)	ENSSMAG00000027112	HELZ (ENSSMAG00000018328)	PSMD12 (ENSSMAG00000018388)	ENSSMAG00000018419
Tongue sole	MODERN SPECIES	19	ENSCSEG00000008288	RPS6KB2 (ENSCSEG00000008322)	ENSCSEG00000008336	ENSCSEG00000009670	ENSCSEG00000009703	ENSCSEG00000009714	SMARCA4 (ENSCSEG00000009723)	ENSCSEG00000009760	atg4da (ENSCSEG00000009774)	MAST1 (ENSCSEG00000009799)	rnaseh2a (ENSCSEG00000009842)	SOX10 (ENSCSEG00000009865)	ENSCSEG00000009882	ENSCSEG00000009951	ENSCSEG00000009965	ENSCSEG00000009983 #22	ENSCSEG00000010002	nol11 (ENSCSEG00000010017) #23	BPTF (ENSCSEG00000010045)	ENSCSEG00000010085	ENSCSEG00000010099	SMURF2 (ENSCSEG00000010112)	prkcaa (ENSCSEG00000010211)	cacng5a (ENSCSEG00000010270)	NOMO1 (ENSCSEG00000010292)	TMC7 (ENSCSEG00000010365)	ENSCSEG00000010398	gsg1l (ENSCSEG00000010419)	sec23b (ENSCSEG00000010437)	ccdc85al (ENSCSEG00000010466)	ENSCSEG00000010483
Carangaria_A	ANCESTRAL SPECIES	24													ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT00390000005412 #22	ENSGT01030000235173.a.a	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000163520.A.a.a.b.c	ENSGT00940000156104.B	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686
Seriola	ANCESTRAL SPECIES	11	ENSGT00390000011856 #21	ENSGT00940000153578.A.f #20	ENSGT00390000017589 #19	ENSGT00940000157287 #18	ENSGT00940000159027 #17	ENSGT00390000015579.a.a.a #16	ENSGT00940000160755 #15	ENSGT00940000157864.a.a #14	ENSGT00940000155004.s #13	ENSGT00940000155159.C	ENSGT00940000155858.f	ENSGT00390000000159	ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.i.b	ENSGT00390000005412 #22	ENSGT01000000219642	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686	ENSGT00940000153510.a
Greater amberjack	MODERN SPECIES	170	ten1 (ENSSDUG00000019278) #19	acox1 (ENSSDUG00000019228) #18	RHBDF2 (ENSSDUG00000019103) #17	aanat1 (ENSSDUG00000019079) #16	UBE2O (ENSSDUG00000019037) #15	SPHK1 (ENSSDUG00000019030) #14	cygb2 (ENSSDUG00000019006) #13	ENSSDUG00000018996	ENSSDUG00000018917	ubn2a (ENSSDUG00000018740)	ttc26 (ENSSDUG00000018661)	ENSSDUG00000018641	ENSSDUG00000018630	ENSSDUG00000018590	ENSSDUG00000018581	ENSSDUG00000018555 #22	ENSSDUG00000018544	SMURF2 (ENSSDUG00000018470)	ENSSDUG00000018444	C17orf58 (ENSSDUG00000018432)	BPTF (ENSSDUG00000018325)	nol11 (ENSSDUG00000018298) #23	ENSSDUG00000018277	ENSSDUG00000018249	ENSSDUG00000018235	prkcaa (ENSSDUG00000018185)
Yellowtail amberjack	MODERN SPECIES	2899						SPHK1 (ENSSLDG00000023282) #14	cygb2 (ENSSLDG00000023286) #13	ENSSLDG00000023302	ubn2a (ENSSLDG00000023351)	ttc26 (ENSSLDG00000023423)	ENSSLDG00000023460	ENSSLDG00000023480	ENSSLDG00000023559	ENSSLDG00000023703	ENSSLDG00000023707	ENSSLDG00000000073 #22	ENSSLDG00000000122	ENSSLDG00000000147	SMURF2 (ENSSLDG00000000172)	ENSSLDG00000000291	C17orf58 (ENSSLDG00000000359)	BPTF (ENSSLDG00000000370)	nol11 (ENSSLDG00000000392) #23	APOH (ENSSLDG00000000397)	APOH (ENSSLDG00000000413)	prkcaa (ENSSLDG00000000416)	ENSSLDG00000000512	cacng5a (ENSSLDG00000000532)	CACNG4 (ENSSLDG00000000563)	cacng1a (ENSSLDG00000000588)	helz (ENSSLDG00000000611)
Barramundi perch	MODERN SPECIES	194											ENSLCAG00010025744	ENSLCAG00010025737	ENSLCAG00010025733	ENSLCAG00010025731	ENSLCAG00010025724	ENSLCAG00010025720 #22	ENSLCAG00010025717	SMURF2 (ENSLCAG00010025558)	ENSLCAG00010025453	C17orf58 (ENSLCAG00010025445)	BPTF (ENSLCAG00010025373)	nol11 (ENSLCAG00010025328) #23	APOH (ENSLCAG00010025317)	APOH (ENSLCAG00010025313)	ENSLCAG00010025291	prkcaa (ENSLCAG00010025237)	cacng5a (ENSLCAG00010025220)	CACNG4 (ENSLCAG00010025216)	cacng1a (ENSLCAG00010025209)	helz (ENSLCAG00010025171)	psmd12 (ENSLCAG00010025136)
Anabantaria	ANCESTRAL SPECIES	1	ENSGT00940000155159.C	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.b	ENSGT01030000234575.c.a.a.a.a.a.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000160720.b.a
Anabantoidei	ANCESTRAL SPECIES		ENSGT00940000155858.f	ENSGT00940000155159.C	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.l	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.k.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00390000011517.a.a.c.a.b
Siamese fighting fish	DUPLICATION
Siamese fighting fish	MODERN SPECIES		ENSBSLG00000000341	ENSBSLG00000000253	ENSBSLG00000000247	ENSBSLG00000000241	ENSBSLG00000000233	ENSBSLG00000000221	ENSBSLG00000000216	ENSBSLG00000000202	ENSBSLG00000000199	ENSBSLG00000000188	ENSBSLG00000000178	ENSBSLG00000000169	ENSBSLG00000000162	ENSBSLG00000000142	ENSBSLG00000000129 #22	ENSBSLG00000000107 #22	ENSBSLG00000000098	SMURF2 (ENSBSLG00000009670)	ENSBSLG00000009640	ENSBSLG00000009634	BPTF (ENSBSLG00000009036)	ENSBSLG00000008891	rps6 (ENSBSLG00000008873)	ACER2 (ENSBSLG00000008867)	tspan5b (ENSBSLG00000008840)	mttp (ENSBSLG00000008780)	ENSBSLG00000008776	ENSBSLG00000008763	SOD3 (ENSBSLG00000008755)	dhx15 (ENSBSLG00000008594)	ENSBSLG00000008532
Siamese fighting fish	MODERN SPECIES		DDX5 (ENSBSLG00000000927)	ENSBSLG00000000341	ENSBSLG00000000253	ENSBSLG00000000247	ENSBSLG00000000241	ENSBSLG00000000233	ENSBSLG00000000221	ENSBSLG00000000216	ENSBSLG00000000202	ENSBSLG00000000199	ENSBSLG00000000188	ENSBSLG00000000178	ENSBSLG00000000169	ENSBSLG00000000162	ENSBSLG00000000142	ENSBSLG00000000129 #22	ENSBSLG00000000107 #22	ENSBSLG00000000098	SMURF2 (ENSBSLG00000009670)	ENSBSLG00000009640	ENSBSLG00000009634	BPTF (ENSBSLG00000009036)	ENSBSLG00000008891	rps6 (ENSBSLG00000008873)	ACER2 (ENSBSLG00000008867)	tspan5b (ENSBSLG00000008840)	mttp (ENSBSLG00000008780)	ENSBSLG00000008776	ENSBSLG00000008763	SOD3 (ENSBSLG00000008755)	dhx15 (ENSBSLG00000008594)
Ovalentaria	ANCESTRAL SPECIES		ENSGT00940000155159.C.nb	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT00390000005412 #22	ENSGT01030000235173	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000167917	ENSGT00940000156686
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT00940000155159.C.nb	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT00390000005412 #22	ENSGT01030000235173	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT00950000183116.b.a.a.b.a.b.n	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000167917	ENSGT00940000156686
Cichlidae	ANCESTRAL SPECIES	3	ENSGT00940000155004.s #13	ENSGT00940000157864.a.a #14	ENSGT00940000160755 #15	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.a	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.b	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.m	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.a	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	5	ENSGT00390000015579.a.a.a #16	ENSGT00940000159027 #17	ENSGT00940000157287 #18	ENSGT00390000017589 #19	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.b	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.m	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.a	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a
Haplochromini	ANCESTRAL SPECIES	3	ENSGT00940000153578.A.f #20	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.a.a.a.a	ENSGT00970000193973	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.a.a.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.b	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.a.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.m	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.a	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a
Burton s mouthbrooder	MODERN SPECIES	620													ENSHBUG00000014736	ENSHBUG00000014745	ENSHBUG00000014753	ENSHBUG00000014767 #22	SMURF2 (ENSHBUG00000014812)	ENSHBUG00000014841	C17orf58 (ENSHBUG00000014851)	BPTF (ENSHBUG00000014963)	nol11 (ENSHBUG00000014985) #23	APOH (ENSHBUG00000015009)	APOH (ENSHBUG00000015021)	prkcaa (ENSHBUG00000015189)	cacng5a (ENSHBUG00000015243)	CACNG4 (ENSHBUG00000015270)	cacng1a (ENSHBUG00000015290)	helz (ENSHBUG00000015322)	psmd12 (ENSHBUG00000015401)	ENSHBUG00000015425	ENSHBUG00000015430
Haplochromini_B	ANCESTRAL SPECIES	8	ENSGT00390000011856 #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.a.a.a.a	ENSGT00970000193973.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.a.a.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.n.b	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.a.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.b.k.a.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.m	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.b.b	ENSGT01020000230338.a.b.b.a.a.b.a.a.b.a	ENSGT01020000230338.a.b.b.a.a.b.a.a.a	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000167917	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a
Eastern happy	MODERN SPECIES	18	srp68 (ENSACLG00000003127) #21	POLG2 (ENSACLG00000003123)	DDX5 (ENSACLG00000003098)	ENSACLG00000003073	ENSACLG00000003065	ENSACLG00000003031	ENSACLG00000003018	ENSACLG00000003004	ENSACLG00000002976	ENSACLG00000002948	ENSACLG00000002942	ENSACLG00000002925	ENSACLG00000002838	ENSACLG00000002807	ENSACLG00000002793	CEP95 (ENSACLG00000002766) #22	SMURF2 (ENSACLG00000002616)	ENSACLG00000002499	C17orf58 (ENSACLG00000002492)	BPTF (ENSACLG00000002435)	nol11 (ENSACLG00000002421) #23	APOH (ENSACLG00000002407)	ENSACLG00000002402	prkcaa (ENSACLG00000002330)	cacng5a (ENSACLG00000002302)	CACNG4 (ENSACLG00000002287)	cacng1a (ENSACLG00000002262)	ENSACLG00000002241	ENSACLG00000002206	psmd12 (ENSACLG00000002152)	ENSACLG00000002107
Zebra mbuna	MODERN SPECIES	1109	srp68 (ENSMZEG00005001197) #21	POLG2 (ENSMZEG00005001234)	DDX5 (ENSMZEG00005001247)	ENSMZEG00005001275	ENSMZEG00005001287	ENSMZEG00005001303	ENSMZEG00005001307	ENSMZEG00005001324	ENSMZEG00005001361	ENSMZEG00005001388	ENSMZEG00005001405	ENSMZEG00005001492	ENSMZEG00005001513	ENSMZEG00005001533	ENSMZEG00005001549	CEP95 (ENSMZEG00005001597) #22	SMURF2 (ENSMZEG00005001617)	ENSMZEG00005001707	C17orf58 (ENSMZEG00005001743)	BPTF (ENSMZEG00005001750)	nol11 (ENSMZEG00005001809) #23	APOH (ENSMZEG00005001824)	APOH (ENSMZEG00005001833)	prkcaa (ENSMZEG00005001850)	cacng5a (ENSMZEG00005001898)	CACNG4 (ENSMZEG00005001913)	cacng1a (ENSMZEG00005001928)	helz (ENSMZEG00005001957)	psmd12 (ENSMZEG00005001982)	ENSMZEG00005002026	ENSMZEG00005002046
Lyretail cichlid	MODERN SPECIES	301	acox1 (ENSNBRG00000002725) #18	ten1 (ENSNBRG00000002768) #19	evpla (ENSNBRG00000002781) #20	srp68 (ENSNBRG00000002831) #21	POLG2 (ENSNBRG00000002880)	DDX5 (ENSNBRG00000002979)	ENSNBRG00000003070	ENSNBRG00000003091	ENSNBRG00000003128	ENSNBRG00000003151	ENSNBRG00000003185	ENSNBRG00000003222	ENSNBRG00000003252	ENSNBRG00000003287	ENSNBRG00000003400	CEP95 (ENSNBRG00000003428) #22	SMURF2 (ENSNBRG00000003481)	ENSNBRG00000003538	ENSNBRG00000003577	BPTF (ENSNBRG00000003599)	nol11 (ENSNBRG00000003687) #23	APOH (ENSNBRG00000003749)	APOH (ENSNBRG00000003759)	prkcaa (ENSNBRG00000003773)	CACNG5 (ENSNBRG00000003834)	CACNG4 (ENSNBRG00000003865)	cacng1a (ENSNBRG00000003883)	ENSNBRG00000003905	helz (ENSNBRG00000003933)	ENSNBRG00000004047	ENSNBRG00000004071
Midas cichlid	MODERN SPECIES	338											ENSACIG00000005917	ENSACIG00000005935	ENSACIG00000005944	ENSACIG00000005959	ENSACIG00000005989	CEP95 (ENSACIG00000006009) #22	SMURF2 (ENSACIG00000006043)	ENSACIG00000006082	ENSACIG00000006106	BPTF (ENSACIG00000006119)	nol11 (ENSACIG00000006183) #23	APOH (ENSACIG00000006229)	APOH (ENSACIG00000006257)	prkcaa (ENSACIG00000006292)	cacng5a (ENSACIG00000006340)	CACNG4 (ENSACIG00000006355)	cacng1a (ENSACIG00000006371)	ENSACIG00000006390	ENSACIG00000006410	psmd12 (ENSACIG00000006444)	ENSACIG00000006470
Clown anemonefish	MODERN SPECIES	2613									ENSAOCG00000006563	ENSAOCG00000006633	ENSAOCG00000006683	ENSAOCG00000000324	ENSAOCG00000006714	ENSAOCG00000006755	ENSAOCG00000000344	ENSAOCG00000000349 #22
Orange clownfish	MODERN SPECIES	17	RHBDF2 (ENSAPEG00000002505) #17	acox1 (ENSAPEG00000002575) #18	ten1 (ENSAPEG00000002593) #19	evpla (ENSAPEG00000002618) #20	srp68 (ENSAPEG00000002805) #21	POLG2 (ENSAPEG00000002866)	DDX5 (ENSAPEG00000002878)	ENSAPEG00000002927	ENSAPEG00000002947	ENSAPEG00000002970	ENSAPEG00000003106	ENSAPEG00000003114	ENSAPEG00000003129	ENSAPEG00000003148	ENSAPEG00000003181	CEP95 (ENSAPEG00000003201) #22	ENSAPEG00000003230	ENSAPEG00000003253	SMURF2 (ENSAPEG00000003278)	ENSAPEG00000003379	ENSAPEG00000003417	BPTF (ENSAPEG00000003435)	nol11 (ENSAPEG00000003525) #23	ENSAPEG00000003542	APOH (ENSAPEG00000003550)	APOH (ENSAPEG00000003562)	prkcaa (ENSAPEG00000003599)	ENSAPEG00000003667	cacng5a (ENSAPEG00000003726)	CACNG4 (ENSAPEG00000003754)	cacng1a (ENSAPEG00000003789)
Oryzias	ANCESTRAL SPECIES	28	ENSGT00390000014520	ENSGT00940000165591.a	ENSGT00390000007773	ENSGT00940000155421.a.a	ENSGT00390000000111.b.a.a	ENSGT00940000153972.A.b	ENSGT00390000002393	ENSGT00440000038745.b	ENSGT00730000111088.a	ENSGT00390000016730	ENSGT00940000160049 #8	ENSGT00940000156448.a.a #9	ENSGT00940000156057.s.a	ENSGT00390000010231	ENSGT00940000163957.e.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT01030000234601.n.b.a	ENSGT01030000234601.n.b.b
Javanese ricefish	MODERN SPECIES		notum2 (ENSOJAG00000018620)	COQ7 (ENSOJAG00000018614)	ENSOJAG00000015103	cep20 (ENSOJAG00000015005)	NDE1 (ENSOJAG00000013758)	panx1b (ENSOJAG00000013738)	MARF1 (ENSOJAG00000013601)	bmerb1 (ENSOJAG00000013581)	MPV17L (ENSOJAG00000013550)	ENSOJAG00000013529	ENSOJAG00000013198	gga1 (ENSOJAG00000012003) #9	ENSOJAG00000011918	ENSOJAG00000011895	klf1 (ENSOJAG00000011880)	ENSOJAG00000011868 #22	SMURF2 (ENSOJAG00000010695)	ENSOJAG00000010525	ENSOJAG00000010509	BPTF (ENSOJAG00000009321)	NOL11 (ENSOJAG00000009204) #23	APOH (ENSOJAG00000009181)	APOH (ENSOJAG00000009151)	prkcaa (ENSOJAG00000007263)	cacng5a (ENSOJAG00000007055)	ENSOJAG00000006968	CACNG4 (ENSOJAG00000006935)	cacng1a (ENSOJAG00000006927)	helz (ENSOJAG00000005498)	psmd12 (ENSOJAG00000005374)	ENSOJAG00000005344
Oryzias_a	ANCESTRAL SPECIES	34	ENSGT00390000014520	ENSGT00940000165591.a	ENSGT00390000007773	ENSGT00940000155421.a.a	ENSGT00390000000111.b.a.a	ENSGT00940000153972.A.b	ENSGT00390000002393	ENSGT00440000038745.b	ENSGT00730000111088.a	ENSGT00390000016730	ENSGT00940000160049 #8	ENSGT00940000156448.a.a #9	ENSGT00940000156057.s.a	ENSGT00390000010231	ENSGT00940000163957.e.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000180664	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT01030000234601.n.b.b.e
Japanese Medaka HdrR	MODERN SPECIES		ENSORLG00000013429	cep20 (ENSORLG00000013435)	myh11a (ENSORLG00000013536)	NDE1 (ENSORLG00000013552)	panx1b (ENSORLG00000013579)	MARF1 (ENSORLG00000013599)	bmerb1 (ENSORLG00000013625)	MPV17L (ENSORLG00000013632)	ENSORLG00000013663	ddx17 (ENSORLG00000013685) #8	gga1 (ENSORLG00000026738) #9	ENSORLG00000030024	ENSORLG00000013708	ENSORLG00000030178	ENSORLG00000030426	ENSORLG00000013735 #22	SMURF2 (ENSORLG00000013762)	ENSORLG00000029895	ENSORLG00000013777	ENSORLG00000024190	ENSORLG00000025405	NOL11 (ENSORLG00000013814) #23	APOH (ENSORLG00000013824)	APOH (ENSORLG00000013831)	ENSORLG00000029863	PRKCA (ENSORLG00000013842)	cacng5a (ENSORLG00000013856)	CACNG4 (ENSORLG00000021830)	cacng1a (ENSORLG00000013870)	helz (ENSORLG00000013894)	psmd12 (ENSORLG00000013934)
Chinese medaka	MODERN SPECIES	1295	coq7 (ENSOSIG00000023603)	ENSOSIG00000023081	cep20 (ENSOSIG00000022838)	myh11a (ENSOSIG00000022407)	NDE1 (ENSOSIG00000022300)	panx1b (ENSOSIG00000022297)	MARF1 (ENSOSIG00000021881)	bmerb1 (ENSOSIG00000021704)	MPV17L (ENSOSIG00000021700)	ENSOSIG00000021666	ENSOSIG00000021286	gga1 (ENSOSIG00000020683) #9	ENSOSIG00000020653	ENSOSIG00000020649	klf1 (ENSOSIG00000020646)	ENSOSIG00000020645 #22	SMURF2 (ENSOSIG00000020161)	ENSOSIG00000020096	ENSOSIG00000020093	BPTF (ENSOSIG00000018638)	nol11 (ENSOSIG00000018569) #23	APOH (ENSOSIG00000018565)	APOH (ENSOSIG00000018562)	ENSOSIG00000018561	prkcaa (ENSOSIG00000018458)	cacng5a (ENSOSIG00000018429)	CACNG4 (ENSOSIG00000018427)	cacng1a (ENSOSIG00000018426)	helz (ENSOSIG00000017550)	psmd12 (ENSOSIG00000017489)	ENSOSIG00000017485
Mangrove rivulus	MODERN SPECIES	257									ENSKMAG00000016700	ENSKMAG00000016712	ENSKMAG00000016730	ENSKMAG00000016755	ENSKMAG00000016766	ENSKMAG00000016779	ENSKMAG00000016790	ENSKMAG00000016816 #22	ENSKMAG00000016846	ENSKMAG00000016859	SMURF2 (ENSKMAG00000016881)	ENSKMAG00000016945	ENSKMAG00000016963	BPTF (ENSKMAG00000017023)	nol11 (ENSKMAG00000017063) #23	APOH (ENSKMAG00000017082)	APOH (ENSKMAG00000017100)	prkcaa (ENSKMAG00000017114)	cacng5a (ENSKMAG00000017192)	CACNG4 (ENSKMAG00000017209)	cacng1a (ENSKMAG00000017229)	helz (ENSKMAG00000017251)	psmd12 (ENSKMAG00000017294)
Poeciliinae	ANCESTRAL SPECIES	9														ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.k.b	ENSGT01020000230338.a.b.b.a.a.b.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870
Poecilia	ANCESTRAL SPECIES	6								ENSGT01020000230338.a.b.b.a.a.b.a.b.b.a.a	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.l	ENSGT01020000230360.c.b.a.b.a.a.a.a.b	ENSGT00990000203553.c.a.a.b.a.a.a.a.b.n	ENSGT01100000263569.a.b.a.b.a.b.a.e.b.b.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b	ENSGT01020000230338.a.b.b.a.a.b.a.b.b.b.b.k.b	ENSGT01020000230338.a.b.b.a.a.b.b	ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000160720.b.a	ENSGT00940000163128.a
Amazon molly	MODERN SPECIES	886		ENSPFOG00000017848	ENSPFOG00000017855	ENSPFOG00000017852	ENSPFOG00000020819	hist2h3c (ENSPFOG00000024515)	ENSPFOG00000020820	ENSPFOG00000017862	ENSPFOG00000017865	ENSPFOG00000023736	ENSPFOG00000020821	ENSPFOG00000017867	ENSPFOG00000017868	ENSPFOG00000017874	ENSPFOG00000023356	ENSPFOG00000017885 #22	SMURF2 (ENSPFOG00000017936)
Guppy	MODERN SPECIES	439	wdr83os (ENSPREG00000000218)	PSPN (ENSPREG00000000219)	gtf3aa (ENSPREG00000000220)	c3b.2 (ENSPREG00000000221)	ENSPREG00000000222	ENSPREG00000000223	ENSPREG00000000224	ENSPREG00000000225	ENSPREG00000000226	ENSPREG00000000227	ENSPREG00000000228	ENSPREG00000000229	ENSPREG00000000230	ENSPREG00000000231	ENSPREG00000000232	ENSPREG00000000233 #22	SMURF2 (ENSPREG00000000234)	ENSPREG00000000235	C17orf58 (ENSPREG00000000236)	BPTF (ENSPREG00000000237)	nol11 (ENSPREG00000000238) #23	APOH (ENSPREG00000000239)	APOH (ENSPREG00000000240)	prkcaa (ENSPREG00000000241)	cacng5a (ENSPREG00000000242)	CACNG4 (ENSPREG00000000243)	CACNG1 (ENSPREG00000000244)	helz (ENSPREG00000000245)	psmd12 (ENSPREG00000000246)	ENSPREG00000000247	ENSPREG00000000248
Platyfish	MODERN SPECIES	19	ENSXMAG00000007760	ENSXMAG00000026083	ENSXMAG00000002923	psmd12 (ENSXMAG00000006524)	helz (ENSXMAG00000006535)	CACNG1 (ENSXMAG00000006557)	CACNG4 (ENSXMAG00000027459)	cacng5a (ENSXMAG00000022399)	prkcaa (ENSXMAG00000006578)	ENSXMAG00000027677	APOH (ENSXMAG00000006629)	APOH (ENSXMAG00000006630)	nol11 (ENSXMAG00000006645) #23	ENSXMAG00000025400	ENSXMAG00000022098	ENSXMAG00000001597 #22	SMURF2 (ENSXMAG00000013616)	ENSXMAG00000013625	ENSXMAG00000026308	BPTF (ENSXMAG00000013629)	ENSXMAG00000028896	ENSXMAG00000013656	ENSXMAG00000023599	ENSXMAG00000021511	ENSXMAG00000029345	ENSXMAG00000024153	ENSXMAG00000025646	ENSXMAG00000025784	ENSXMAG00000022126	ENSXMAG00000019640	ENSXMAG00000011104
NAME_4	ANCESTRAL SPECIES	45																ENSGT00390000005412 #22	ENSGT00940000155563.k.b.b	ENSGT01050000244891.E.a.a	ENSGT00390000002361	ENSGT00940000154830.d	ENSGT00390000009760 #23	ENSGT00940000157228.i.a	ENSGT00940000157228.i.b	ENSGT00940000156104.B	ENSGT01050000244961.a.a.a	ENSGT01050000244893.c.b.b.a	ENSGT00390000007786.a.a	ENSGT00940000156686	ENSGT00940000153510.a	ENSGT00940000163128.a	ENSGT00940000175870
Mummichog	MODERN SPECIES	2328													ENSFHEG00000017124	ENSFHEG00000017109	ENSFHEG00000017084	ENSFHEG00000017057 #22	ENSFHEG00000017049	SMURF2 (ENSFHEG00000017025)	ENSFHEG00000016921	ENSFHEG00000016880	BPTF (ENSFHEG00000016874)	nol11 (ENSFHEG00000016815) #23	APOH (ENSFHEG00000016804)	APOH (ENSFHEG00000016773)	prkcaa (ENSFHEG00000016763)	cacng5a (ENSFHEG00000016651)	CACNG4 (ENSFHEG00000016632)	CACNG1 (ENSFHEG00000016614)	helz (ENSFHEG00000016609)	psmd12 (ENSFHEG00000016488)	ENSFHEG00000016462
Tiger tail seahorse	MODERN SPECIES	257	ndnl2 (ENSHCOG00000000653)	cygb2 (ENSHCOG00000000633) #13	cygb2 (ENSHCOG00000000607) #13	ENSHCOG00000018729	SPHK1 (ENSHCOG00000018734) #14	UBE2O (ENSHCOG00000018812) #15	aanat1 (ENSHCOG00000018838) #16	RHBDF2 (ENSHCOG00000018925) #17	acox1 (ENSHCOG00000018954) #18	ten1 (ENSHCOG00000019014) #19	evpla (ENSHCOG00000019027) #20	srp68 (ENSHCOG00000019126) #21	POLG2 (ENSHCOG00000019138)	DDX5 (ENSHCOG00000019168)	ENSHCOG00000019173	CEP95 (ENSHCOG00000019198) #22	SMURF2 (ENSHCOG00000019246)	C17orf58 (ENSHCOG00000019266)	BPTF (ENSHCOG00000019348)	nol11 (ENSHCOG00000019366) #23	APOH (ENSHCOG00000000654)	prkcaa (ENSHCOG00000019411)	cacng5a (ENSHCOG00000019432)	CACNG4 (ENSHCOG00000019462)	cacng1a (ENSHCOG00000019475)	helz (ENSHCOG00000019617)	psmd12 (ENSHCOG00000000525)	ENSHCOG00000019682	ENSHCOG00000019692	ENSHCOG00000019706	ENSHCOG00000019716
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Huchen	MODERN SPECIES	322											znf618 (ENSHHUG00000045813)	ENSHHUG00000045807	ENSHHUG00000045803	ENSHHUG00000045796	ENSHHUG00000045792 #22	ENSHHUG00000045779 #22	ENSHHUG00000045719	ENSHHUG00000045718	ENSHHUG00000045716	ENSHHUG00000045713	mcoln1a (ENSHHUG00000045689)	TRAPPC5 (ENSHHUG00000045611)	ENSHHUG00000045606	ENSHHUG00000045601	ENSHHUG00000045556	trim25 (ENSHHUG00000045542)	dgke (ENSHHUG00000045536)	si:dkey-31g6.6 (ENSHHUG00000045531)	cbx8b (ENSHHUG00000045522)	CBX4 (ENSHHUG00000045521)	ENSHHUG00000045519
Huchen	MODERN SPECIES	322												znf618 (ENSHHUG00000045813)	ENSHHUG00000045807	ENSHHUG00000045803	ENSHHUG00000045796	ENSHHUG00000045792 #22	ENSHHUG00000045779 #22	ENSHHUG00000045719	ENSHHUG00000045718	ENSHHUG00000045716	ENSHHUG00000045713	mcoln1a (ENSHHUG00000045689)	TRAPPC5 (ENSHHUG00000045611)	ENSHHUG00000045606	ENSHHUG00000045601	ENSHHUG00000045556	trim25 (ENSHHUG00000045542)	dgke (ENSHHUG00000045536)	si:dkey-31g6.6 (ENSHHUG00000045531)	cbx8b (ENSHHUG00000045522)	CBX4 (ENSHHUG00000045521)
Salmoninae_a	ANCESTRAL SPECIES	67	ENSGT00940000155386.a.m	ENSGT00940000153470.a.b.b.m.a.a.b	ENSGT00970000193390.c.a.a.b.b.b.a	ENSGT01040000240385.A.b.b.a.a.a.b.b.b.b	ENSGT00940000163566.a.b.a.a.c	ENSGT00950000182803.A.a.b.k.a.d	ENSGT00940000155004.s.c #13	ENSGT00940000157864.a.a.j.b.a #14	ENSGT00940000160755.f #15	ENSGT00390000015579.a.a.a.d #16	ENSGT00940000159027.d #17	ENSGT00940000157287.o.a #18	ENSGT00390000017589.h #19	ENSGT00390000011856.j #21	ENSGT00940000154705.A.b.b	ENSGT00390000005412.q.a #22	ENSGT00940000155563.k.b.a.a.a	ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.b.a.b	ENSGT00990000204804.b	ENSGT00950000183036.b.e.c	ENSGT00390000000976.c.b	ENSGT00940000158718.a.a.c	ENSGT00940000165433.c	ENSGT00940000164979.h	ENSGT00940000158604.c	ENSGT00390000006555.c.b	ENSGT00940000158476.a.a.b	ENSGT00940000160081.c.a.n	ENSGT00940000166520.i.a.a	ENSGT00940000160777.d	ENSGT00440000035688.i.a
Salmo	ANCESTRAL SPECIES	56	ENSGT00940000153470.a.b.b.m.a.a.b	ENSGT00970000193390.c.a.a.b.b.b.a	ENSGT01040000240385.A.b.b.a.a.a.b.b.b.b	ENSGT00940000163566.a.b.a.a.c	ENSGT00950000182803.A.a.b.k.a.d	ENSGT00940000155004.s.c #13	ENSGT00940000157864.a.a.j.a #14	ENSGT00940000160755.f #15	ENSGT00390000015579.a.a.a.d #16	ENSGT00940000159027.d #17	ENSGT00940000157287.o.a #18	ENSGT00990000206930	ENSGT00940000153578.A.f.e #20	ENSGT00390000011856.j #21	ENSGT00940000154705.A.b.b	ENSGT00390000005412.q.a #22	ENSGT00940000155563.k.b.a.a.a	ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.b.a.a.a	ENSGT00940000154446.a.h.a	ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.b.a.b	ENSGT00990000204804.b	ENSGT00950000183036.b.e.c	ENSGT00390000000976.c.b	ENSGT00940000158718.a.a.c	ENSGT00940000165433.c	ENSGT00940000164979.h	ENSGT00940000158604.c	ENSGT00390000006555.c.b	ENSGT00940000158476.a.a.b	ENSGT00940000160081.c.a.n	ENSGT00940000166520.i.a.a
River trout	MODERN SPECIES	5	ENSSTUG00000043572	ENSSTUG00000043558	ENSSTUG00000043550	PRPSAP1 (ENSSTUG00000043356)	cygb2 (ENSSTUG00000043331) #13	SPHK1 (ENSSTUG00000043324) #14	UBE2O (ENSSTUG00000043261) #15	aanat1 (ENSSTUG00000043229) #16	RHBDF2 (ENSSTUG00000042665) #17	acox1 (ENSSTUG00000039621) #18	ENSSTUG00000039587	evpla (ENSSTUG00000039505) #20	srp68 (ENSSTUG00000039398) #21	POLG2 (ENSSTUG00000039397)	DDX5 (ENSSTUG00000036181)	CEP95 (ENSSTUG00000036096) #22	SMURF2 (ENSSTUG00000035451)	ENSSTUG00000035419	ENSSTUG00000035416	ENSSTUG00000035399	mcoln1a (ENSSTUG00000033888)	TRAPPC5 (ENSSTUG00000033843)	pglyrp2 (ENSSTUG00000033832)	ENSSTUG00000033723	trim25 (ENSSTUG00000033694)	dgke (ENSSTUG00000033527)	si:dkey-31g6.6 (ENSSTUG00000033505)	cbx8b (ENSSTUG00000033482)	CBX4 (ENSSTUG00000033465)	ENSSTUG00000033411	CARD14 (ENSSTUG00000033392)
Atlantic salmon	MODERN SPECIES	3	ENSSSAG00000049461	ENSSSAG00000049483	ENSSSAG00000049645	ENSSSAG00000105708	ENSSSAG00000095242	kpra (ENSSSAG00000038411)	ENSSSAG00000040712 #13	SPHK1 (ENSSSAG00000040740) #14	ENSSSAG00000105613	UBE2O (ENSSSAG00000040780) #15	RHBDF2 (ENSSSAG00000041853) #17	acox1 (ENSSSAG00000042221) #18	ENSSSAG00000042629 #20	srp68 (ENSSSAG00000042726) #21	DDX5 (ENSSSAG00000043570)	ENSSSAG00000046872 #22	SMURF2 (ENSSSAG00000046900)	ENSSSAG00000095849	ENSSSAG00000090316	ENSSSAG00000047734	ENSSSAG00000047813	ENSSSAG00000054094	ENSSSAG00000054105	ngap (ENSSSAG00000054125)	dgke (ENSSSAG00000092606)	trim25 (ENSSSAG00000046838)	si:dkey-31g6.6 (ENSSSAG00000094418)	cbx8b (ENSSSAG00000054783)	ENSSSAG00000092690	ENSSSAG00000054169	ENSSSAG00000054797
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00940000155386.a.m	ENSGT01040000240385.A.b.b.a.a.a.b.b.b.b	ENSGT00940000163566.a.b.a.a.c	ENSGT00950000182803.A.a.b.k.a.d	ENSGT00940000155004.s.c #13	ENSGT00940000157864.a.a.j.b.a #14	ENSGT00940000160755.f #15	ENSGT00390000015579.a.a.a.d #16	ENSGT00940000159027.d #17	ENSGT00940000157287.o.a #18	ENSGT00390000017589.h #19	ENSGT00940000153578.A.f.e #20	ENSGT00390000011856.j #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b.b	ENSGT00390000005412.q.a #22	ENSGT00940000155563.k.b.a.a.a	ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.b.a.b	ENSGT00990000204804.b	ENSGT00950000183036.b.e.c	ENSGT00390000000976.c.a.a.a	ENSGT00940000158718.a.a.c.a	ENSGT00940000165433.c	ENSGT00940000164979.h	ENSGT00940000158604.c	ENSGT00390000006555.c.b	ENSGT00940000158476.a.a.b	ENSGT00940000160081.c.a.n	ENSGT00940000166520.i.a.a	ENSGT00940000160777.d	ENSGT00390000000463.a.e
Oncorhynchus_a	ANCESTRAL SPECIES	3	ENSGT00640000091541.z.a.a	ENSGT01060000248591.a.a.b.a.b.c	ENSGT00940000168473	ENSGT00940000155386.a.m	ENSGT00940000157864.a.a.j.b.a #14	ENSGT00940000160755.f #15	ENSGT00390000015579.a.a.a.d #16	ENSGT00940000159027.d #17	ENSGT00940000157287.p #18	ENSGT00940000157287.o.a #18	ENSGT00390000017589.h #19	ENSGT00940000153578.A.f.e #20	ENSGT00390000011856.j #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b.b	ENSGT00390000005412.q.a #22	ENSGT00940000155563.k.b.a.a.a	ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.b.a.b	ENSGT00990000204804.b	ENSGT00950000183036.b.e.c	ENSGT00390000000976.c.a.a.a	ENSGT00940000158718.a.a.c.a	ENSGT00940000165433.c	ENSGT00940000164979.h	ENSGT00940000158604.c	ENSGT00390000006555.c.b	ENSGT00940000158476.a.a.b	ENSGT00940000160081.c.a.n	ENSGT00940000166520.i.a.a	ENSGT00940000160777.d	ENSGT00390000000463.a.e
Coho salmon	MODERN SPECIES		MGAT5B (ENSOKIG00005001240)	ENSOKIG00005001226	ENSOKIG00005001224	PRPSAP1 (ENSOKIG00005001144)	cygb2 (ENSOKIG00005001105) #13	SPHK1 (ENSOKIG00005001102) #14	UBE2O (ENSOKIG00005001071) #15	aanat1 (ENSOKIG00005001060) #16	RHBDF2 (ENSOKIG00005001037) #17	acox1 (ENSOKIG00005000856) #18	ten1 (ENSOKIG00005000804) #19	evpla (ENSOKIG00005000791) #20	srp68 (ENSOKIG00005000777) #21	POLG2 (ENSOKIG00005000753)	DDX5 (ENSOKIG00005000588)	CEP95 (ENSOKIG00005000463) #22	SMURF2 (ENSOKIG00005000334)	ENSOKIG00005000251	ENSOKIG00005000247	ENSOKIG00005000240	mcoln1a (ENSOKIG00005000188)	ENSOKIG00005000115	ENSOKIG00005000049	ENSOKIG00005000042	ENSOKIG00005048577	pglyrp2 (ENSOKIG00005048568)	ENSOKIG00005048558	ENSOKIG00005048543	trim25 (ENSOKIG00005048532)	dgke (ENSOKIG00005048495)	si:dkey-31g6.6 (ENSOKIG00005048486)
Salmoninae	ANCESTRAL SPECIES	432	ENSGT00940000153470.a.b.b.m.a.a.a.b	ENSGT01040000240385.A.b.b.a.a.a.b.b.b.a	ENSGT00940000163566.a.b.a.a.d	ENSGT00950000182803.A.a.b.k.a.c	ENSGT00940000155004.s.d #13	ENSGT00940000157864.a.a.i #14	ENSGT00940000160755.e #15	ENSGT00390000015579.a.a.a.c #16	ENSGT00940000159027.c.b.b #17	ENSGT00940000157287.o.b #18	ENSGT00390000017589.g #19	ENSGT00940000153578.A.f.f #20	ENSGT00390000011856.i #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b.a	ENSGT00390000005412.q.b #22	ENSGT00940000155563.k.b.a.a.b
Salmoninae_a	ANCESTRAL SPECIES	58	ENSGT01040000240385.A.b.b.a.a.a.b.b.b.a	ENSGT00940000163566.a.b.a.a.d	ENSGT00950000182803.A.a.b.k.a.c	ENSGT00940000155004.s.d #13	ENSGT00990000211636	ENSGT00940000157864.a.a.i #14	ENSGT00940000160755.e #15	ENSGT00390000015579.a.a.a.c #16	ENSGT00940000159027.c.b.a #17	ENSGT00940000157287.o.b #18	ENSGT00390000017589.g #19	ENSGT00940000153578.A.f.f #20	ENSGT00390000011856.i #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b.a	ENSGT00390000005412.q.b #22	ENSGT00940000155563.k.b.a.a.b	ENSGT00940000154446.a.h.b	ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.b.a.a.b	ENSGT00940000162287.A.i.b.g.a	ENSGT00990000204804.a	ENSGT00950000183036.b.e.d	ENSGT00390000000976.c.a	ENSGT00940000158718.a.a.d	ENSGT00940000165433.d	ENSGT00940000164979.g	ENSGT00940000158604.d	ENSGT00390000006555.c.a	ENSGT00940000158476.a.a.a	ENSGT00940000160081.c.a.m	ENSGT00940000160777.c
Salmo	ANCESTRAL SPECIES	37	ENSGT01040000240385.A.b.b.a.a.a.b.b.b.a	ENSGT00940000163566.a.b.a.a.d	ENSGT00950000182803.A.a.b.k.a.c	ENSGT00940000155004.s.d #13	ENSGT00990000211636	ENSGT00940000157864.a.a.i #14	ENSGT00940000160755.e #15	ENSGT00390000015579.a.a.a.c #16	ENSGT00940000159027.c.a #17	ENSGT00940000157287.o.b #18	ENSGT00390000017589.g #19	ENSGT00940000153578.A.f.f #20	ENSGT00390000011856.i #21	ENSGT00940000153759.a.b	ENSGT00940000154705.A.b.a	ENSGT00390000005412.q.b #22	ENSGT00940000155563.k.b.a.a.b	ENSGT00940000154446.a.h.b	ENSGT00950000182774.b.a.b.a.b.a.b.a.a.a.b.a.a.b	ENSGT00940000162287.A.i.b.g.a	ENSGT00990000204804.a	ENSGT00950000183036.b.e.d	ENSGT00390000000976.c.a	ENSGT00940000158718.a.a.d	ENSGT00940000165433.d	ENSGT00940000164979.g	ENSGT00940000158604.d	ENSGT00390000006555.d	ENSGT00940000158476.a.a.a	ENSGT00940000160081.c.a.m	ENSGT00940000160777.c
Atlantic salmon	MODERN SPECIES	11	ENSSSAG00000104300	ENSSSAG00000101428	PRPSAP1 (ENSSSAG00000044155)	ENSSSAG00000044124 #13	ENSSSAG00000044115	SPHK1 (ENSSSAG00000087908) #14	UBE2O (ENSSSAG00000040096) #15	aanat (ENSSSAG00000084633) #16	RHBDF2 (ENSSSAG00000085604) #17	acox1 (ENSSSAG00000039321) #18	ENSSSAG00000111716 #18	evpla (ENSSSAG00000048370) #20	srp68 (ENSSSAG00000036209) #21	POLG2 (ENSSSAG00000109515)	DDX5 (ENSSSAG00000082802)	CEP95 (ENSSSAG00000048278) #22	SMURF2 (ENSSSAG00000047242)	ENSSSAG00000047191	ENSSSAG00000097115	ENSSSAG00000082700	ENSSSAG00000047186	ENSSSAG00000046937	TPPC5 (ENSSSAG00000046892)	ENSSSAG00000046883	ENSSSAG00000046853	ENSSSAG00000082759	trim25 (ENSSSAG00000054152)	dgke (ENSSSAG00000116514)	cbx8b (ENSSSAG00000046122)	ENSSSAG00000046105	ENSSSAG00000087355
River trout	MODERN SPECIES	31	ENSSTUG00000022746	ENSSTUG00000022770	ENSSTUG00000022777	PRPSAP1 (ENSSTUG00000022806)	cygb2 (ENSSTUG00000023427) #13	ENSSTUG00000023440	SPHK1 (ENSSTUG00000023448) #14	UBE2O (ENSSTUG00000023465) #15	aanat1 (ENSSTUG00000023749) #16	RHBDF2 (ENSSTUG00000023764) #17	acox1 (ENSSTUG00000023977) #18	ten1 (ENSSTUG00000027400) #19	evpla (ENSSTUG00000027403) #20	srp68 (ENSSTUG00000027420) #21	DDX5 (ENSSTUG00000027525)	ENSSTUG00000027639 #22	SMURF2 (ENSSTUG00000027685)	ENSSTUG00000029055	ENSSTUG00000029057	ENSSTUG00000029074	mcoln1a (ENSSTUG00000029114)	TRAPPC5 (ENSSTUG00000031114)	ENSSTUG00000031135	ENSSTUG00000031141	trim25 (ENSSTUG00000031194)	dgke (ENSSTUG00000031206)	si:dkey-31g6.6 (ENSSTUG00000031331)	cbx8b (ENSSTUG00000031354)	CBX4 (ENSSTUG00000031377)	ENSSTUG00000031396	ccdc40 (ENSSTUG00000031421)
Oncorhynchus	ANCESTRAL SPECIES	42	ENSGT00940000153470.a.b.b.m.a.a.a.b	ENSGT01040000240385.A.b.b.a.a.a.b.b.b.a	ENSGT00940000163566.a.b.a.a.d	ENSGT00950000182803.A.a.b.k.a.c	ENSGT00940000155004.s.d #13	ENSGT00990000211636	ENSGT00940000157864.a.a.i #14	ENSGT00940000160755.e #15	ENSGT00390000015579.a.a.a.c #16	ENSGT00940000159027.c.b.a #17	ENSGT00940000157287.o.b #18	ENSGT00390000017589.g #19	ENSGT00940000153578.A.f.f #20	ENSGT00390000011856.i #21	ENSGT00940000154705.A.b.a	ENSGT00390000005412.q.b #22	ENSGT00940000155563.k.b.a.a.b	ENSGT00940000154446.a.h.b	ENSGT01100000263533.b.b.b.a.b.b.b.b.b.b.c.a	ENSGT00990000204804.a	ENSGT00950000183036.b.e.d	ENSGT00390000000976.c.a.b	ENSGT00940000165433.d	ENSGT00940000164979.g	ENSGT00940000158604.d	ENSGT00390000006555.c.a	ENSGT00940000158476.a.a.a	ENSGT00940000160081.c.a.m	ENSGT00940000160777.c	ENSGT00440000035688.j	ENSGT00390000000463.a.f
Oncorhynchus_a	ANCESTRAL SPECIES	38	ENSGT00940000153470.a.b.b.m.a.a.a.a	ENSGT01040000240385.A.b.b.a.a.a.b.b.b.a	ENSGT00940000163566.a.b.a.a.d	ENSGT00950000182803.A.a.b.k.a.c	ENSGT00940000155004.s.d #13	ENSGT00990000211636	ENSGT00940000157864.a.a.i #14	ENSGT00940000160755.e #15	ENSGT00390000015579.a.a.a.c #16	ENSGT00940000159027.c.b.b #17	ENSGT00940000157287.o.b #18	ENSGT00390000017589.g #19	ENSGT00940000153578.A.f.f #20	ENSGT00390000011856.i #21	ENSGT00940000154705.A.b.a	ENSGT00390000005412.q.b #22	ENSGT00940000155563.k.b.a.a.b	ENSGT00940000154446.a.h.b	ENSGT01100000263533.b.b.b.a.b.b.b.b.b.b.c.a	ENSGT00990000204804.a	ENSGT00950000183036.b.e.d	ENSGT00390000000976.c.a.b	ENSGT00940000165433.d	ENSGT00940000164979.g	ENSGT00940000158604.d	ENSGT00390000006555.c.a	ENSGT00940000158476.a.a.a	ENSGT00940000160081.c.a.m	ENSGT00940000160777.c	ENSGT00440000035688.j	ENSGT00390000000463.a.f
Chinook salmon	MODERN SPECIES	25	MGAT5B (ENSOTSG00005025865)	ENSOTSG00005025900	ENSOTSG00005025901	ENSOTSG00005025902	PRPSAP1 (ENSOTSG00005025905)	cygb2 (ENSOTSG00005025954) #13	SPHK1 (ENSOTSG00005025955) #14	UBE2O (ENSOTSG00005025958) #15	aanat1 (ENSOTSG00005026007) #16	RHBDF2 (ENSOTSG00005026008) #17	acox1 (ENSOTSG00005026037) #18	ten1 (ENSOTSG00005027383) #19	evpla (ENSOTSG00005027384) #20	srp68 (ENSOTSG00005027387) #21	DDX5 (ENSOTSG00005027390)	ENSOTSG00005027796 #22	SMURF2 (ENSOTSG00005027804)	ENSOTSG00005028494	ENSOTSG00005028497	ENSOTSG00005028500	mcoln1a (ENSOTSG00005028523)	TRAPPC5 (ENSOTSG00005032416)	ENSOTSG00005032418	ENSOTSG00005032420	trim25 (ENSOTSG00005032421)	dgke (ENSOTSG00005032422)	ENSOTSG00005032439	cbx8b (ENSOTSG00005032440)	CBX4 (ENSOTSG00005032442)	CARD14 (ENSOTSG00005032444)	ccdc40 (ENSOTSG00005032446)
Coho salmon	MODERN SPECIES	12	MGAT5B (ENSOKIG00005029501)	ENSOKIG00005029489	ENSOKIG00005029484	PRPSAP1 (ENSOKIG00005029112)	CYGB (ENSOKIG00005029075) #13	ENSOKIG00005029064	SPHK1 (ENSOKIG00005029052) #14	UBE2O (ENSOKIG00005028896) #15	aanat1 (ENSOKIG00005028868) #16	RHBDF2 (ENSOKIG00005028593) #17	acox1 (ENSOKIG00005025666) #18	ten1 (ENSOKIG00005025429) #19	evpla (ENSOKIG00005025303) #20	srp68 (ENSOKIG00005025100) #21	DDX5 (ENSOKIG00005024216)	ENSOKIG00005024122 #22	SMURF2 (ENSOKIG00005023110)	ENSOKIG00005023047	ENSOKIG00005023037	ENSOKIG00005023028	ENSOKIG00005023025	MCOLN1 (ENSOKIG00005022060)	TRAPPC5 (ENSOKIG00005022002)	ENSOKIG00005021984	trim25 (ENSOKIG00005021972)	dgke (ENSOKIG00005021895)	si:dkey-31g6.6 (ENSOKIG00005021874)	cbx8b (ENSOKIG00005021851)	CBX4 (ENSOKIG00005021838)	CARD14 (ENSOKIG00005021816)	ccdc40 (ENSOKIG00005021707)
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00390000005412.r #22
Rainbow trout	MODERN SPECIES	4	ENSOMYG00000014536	ENSOMYG00000014564	ENSOMYG00000014568	PRPSAP1 (ENSOMYG00000014610)	ENSOMYG00000014753 #13	ENSOMYG00000005366	SPHK1 (ENSOMYG00000005416) #14	UBE2O (ENSOMYG00000014829) #15	aanat1 (ENSOMYG00000014975) #16	RHBDF2 (ENSOMYG00000014993) #17	acox1 (ENSOMYG00000015091) #18	ten1 (ENSOMYG00000015323) #19	evpla (ENSOMYG00000015327) #20	srp68 (ENSOMYG00000015357) #21	DDX5 (ENSOMYG00000015810)	ENSOMYG00000061586 #22	SMURF2 (ENSOMYG00000019807)	ENSOMYG00000020169	ENSOMYG00000020179	ENSOMYG00000077485	ENSOMYG00000020221	ENSOMYG00000020544	ENSOMYG00000004653	ENSOMYG00000020553	ENSOMYG00000068977	ENSOMYG00000020568	trim25 (ENSOMYG00000020594)	dgke (ENSOMYG00000020638)	si:dkey-31g6.6 (ENSOMYG00000020775)	cbx8b (ENSOMYG00000020793)	ENSOMYG00000020809
Northern pike	MODERN SPECIES	8	ENSELUG00000027599	ENSELUG00000008115	PRPSAP1 (ENSELUG00000008090)	ENSELUG00000008018	cygb2 (ENSELUG00000008042) #13	SPHK1 (ENSELUG00000008009) #14	UBE2O (ENSELUG00000007975) #15	aanat (ENSELUG00000007915) #16	RHBDF2 (ENSELUG00000007849) #17	acox1 (ENSELUG00000007744) #18	ENSELUG00000007704	evpla (ENSELUG00000007680) #20	srp68 (ENSELUG00000007653) #21	POLG2 (ENSELUG00000007591)	DDX5 (ENSELUG00000007424)	CEP95 (ENSELUG00000007540) #22	SMURF2 (ENSELUG00000007365)	ENSELUG00000030348	septin9b (ENSELUG00000007255)	ENSELUG00000007206	znf207b (ENSELUG00000007167)	rhbdl3 (ENSELUG00000007113)	rhot1b (ENSELUG00000000243)	ENSELUG00000028132	ENSELUG00000032480	ENSELUG00000006948	ENSELUG00000030302	EVI5L (ENSELUG00000006910)	DDX39A (ENSELUG00000006779)	ENSELUG00000006729	rab11fip4b (ENSELUG00000006705)