Amniota	ANCESTRAL SPECIES	25	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00940000163703.b	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000203845	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Mammalia	ANCESTRAL SPECIES	62	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00390000005105	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Theria	ANCESTRAL SPECIES	17	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00390000005105	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Eutheria	ANCESTRAL SPECIES	19	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Glires	ANCESTRAL SPECIES	6	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Lesser Egyptian jerboa	MODERN SPECIES	114	ENSJJAG00000015094 #7	Tox3 (ENSJJAG00000022737) #8	ENSJJAG00000022677 #9	Cyld (ENSJJAG00000013829) #10	Nod2 (ENSJJAG00000017441) #11	Snx20 (ENSJJAG00000022175) #12	Nkd1 (ENSJJAG00000016347) #13	Brd7 (ENSJJAG00000024144) #14	Adcy7 (ENSJJAG00000010449) #15	Tent4b (ENSJJAG00000015670) #16	Heatr3 (ENSJJAG00000016795) #17	Cnep1r1 (ENSJJAG00000016846) #18	Zfp423 (ENSJJAG00000019328) #19	4933402J07Rik (ENSJJAG00000013910) #20	Cbln1 (ENSJJAG00000021584) #21	N4bp1 (ENSJJAG00000017340) #22	ENSJJAG00000016189 #23	ENSJJAG00000022493 #24	ENSJJAG00000004386 #25	Abcc12 (ENSJJAG00000012348) #26	ENSJJAG00000018816 #27	Itfg1 (ENSJJAG00000015425) #28	Neto2 (ENSJJAG00000024020) #29	ENSJJAG00000000914 #30	Gpt2 (ENSJJAG00000017421) #31	4921524J17Rik (ENSJJAG00000021053) #32	Mylk3 (ENSJJAG00000004162) #33	ENSJJAG00000021576 #34	Vps35 (ENSJJAG00000013611) #35	Wfdc1 (ENSJJAG00000019944) #36	Atp2c2 (ENSJJAG00000000433) #37
Muroidea	ANCESTRAL SPECIES	19	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.y.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000164424	ENSGT00950000182755.b.a.a.a.a.a.b.d.b	ENSGT01030000234638.b.a.a
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.y.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000164424	ENSGT01030000234638.b.a.a	ENSGT00390000002121
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938.s #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.y.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Chinese hamster chok1gshd	MODERN SPECIES	112	Tox3 (ENSCGRG00001021816) #8	ENSCGRG00001023314 #9	ENSCGRG00001019423	Cyld (ENSCGRG00001000533) #10	Nod2 (ENSCGRG00001011531) #11	Snx20 (ENSCGRG00001020312) #12	Nkd1 (ENSCGRG00001011787) #13	Brd7 (ENSCGRG00001003449) #14	Adcy7 (ENSCGRG00001014504) #15	Tent4b (ENSCGRG00001023597) #16	Heatr3 (ENSCGRG00001024755) #17	Cnep1r1 (ENSCGRG00001009199) #18	Zfp423 (ENSCGRG00001023063) #19	4933402J07Rik (ENSCGRG00001021069) #20	Cbln1 (ENSCGRG00001018308) #21	N4bp1 (ENSCGRG00001014095) #22	Siah1b (ENSCGRG00001006463) #23	LONP2 (ENSCGRG00001009685) #24	Abcc12 (ENSCGRG00001017268) #26	Phkb (ENSCGRG00001003257) #27	Itfg1 (ENSCGRG00001016387) #28	Neto2 (ENSCGRG00001019397) #29	Dnaja2 (ENSCGRG00001019174) #30	Gpt2 (ENSCGRG00001022110) #31	4921524J17Rik (ENSCGRG00001019894) #32	Mylk3 (ENSCGRG00001016524) #33	Orc6 (ENSCGRG00001000545) #34	Vps35 (ENSCGRG00001010516) #35
Golden Hamster	MODERN SPECIES	706	Cyld (ENSMAUG00000001344) #10	Nod2 (ENSMAUG00000004325) #11	Snx20 (ENSMAUG00000020254) #12	Nkd1 (ENSMAUG00000000515) #13	Brd7 (ENSMAUG00000000695) #14	Adcy7 (ENSMAUG00000005638) #15	Tent4b (ENSMAUG00000018042) #16	Heatr3 (ENSMAUG00000020748) #17	Cnep1r1 (ENSMAUG00000012481) #18	ENSMAUG00000013750	Zfp423 (ENSMAUG00000015448) #19	ENSMAUG00000019410	ENSMAUG00000015721	4933402J07Rik (ENSMAUG00000017355) #20	Cbln1 (ENSMAUG00000020791) #21	N4bp1 (ENSMAUG00000019066) #22	Siah1a (ENSMAUG00000001370) #23	ENSMAUG00000017496	ENSMAUG00000001567 #24	Abcc12 (ENSMAUG00000005078) #26	Phkb (ENSMAUG00000016799) #27	Itfg1 (ENSMAUG00000011749) #28	Neto2 (ENSMAUG00000005646) #29	ENSMAUG00000008382	Dnaja2 (ENSMAUG00000013341) #30	Gpt2 (ENSMAUG00000017417) #31
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.y.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000164424	ENSGT01030000234638.b.a.a	ENSGT00390000002121
Northern American deer mouse	MODERN SPECIES	18	ENSPEMG00000005035	Sall1 (ENSPEMG00000012331) #9	Cyld (ENSPEMG00000011322) #10	Nod2 (ENSPEMG00000016933) #11	Snx20 (ENSPEMG00000015231) #12	Nkd1 (ENSPEMG00000028031) #13	Brd7 (ENSPEMG00000015843) #14	Adcy7 (ENSPEMG00000018675) #15	Tent4b (ENSPEMG00000029372) #16	Heatr3 (ENSPEMG00000016174) #17	Cnep1r1 (ENSPEMG00000017702) #18	ENSPEMG00000002704	Zfp423 (ENSPEMG00000015523) #19	4933402J07Rik (ENSPEMG00000016843) #20	Cbln1 (ENSPEMG00000029511) #21	N4bp1 (ENSPEMG00000016429) #22	Siah1b (ENSPEMG00000008065) #23	Lonp2 (ENSPEMG00000010377) #24	Abcc12 (ENSPEMG00000015588) #26	Phkb (ENSPEMG00000004503) #27	Itfg1 (ENSPEMG00000013284) #28	Neto2 (ENSPEMG00000014306) #29	Dnaja2 (ENSPEMG00000016348) #30	Gpt2 (ENSPEMG00000008151) #31	4921524J17Rik (ENSPEMG00000025838) #32	Mylk3 (ENSPEMG00000000415) #33	ENSPEMG00000021580	Orc6 (ENSPEMG00000000721) #34	Vps35 (ENSPEMG00000011942) #35	Or7c19 (ENSPEMG00000024814)	ENSPEMG00000025354
Prairie vole	MODERN SPECIES	98	ENSMOCG00000002231 #9	ENSMOCG00000009848	Nod2 (ENSMOCG00000021721) #11	Snx20 (ENSMOCG00000015078) #12	Nkd1 (ENSMOCG00000019054) #13	Brd7 (ENSMOCG00000022495) #14	Adcy7 (ENSMOCG00000000434) #15	ENSMOCG00000016736	Tent4b (ENSMOCG00000013042) #16	Heatr3 (ENSMOCG00000019132) #17	ENSMOCG00000019184 #18	Zfp423 (ENSMOCG00000002689) #19	4933402J07Rik (ENSMOCG00000020575) #20	Cbln1 (ENSMOCG00000003934) #21	ENSMOCG00000017947	N4bp1 (ENSMOCG00000016652) #22	Siah1b (ENSMOCG00000004613) #23	Lonp2 (ENSMOCG00000003841) #24	Abcc12 (ENSMOCG00000001840) #26	Phkb (ENSMOCG00000021928) #27	Itfg1 (ENSMOCG00000012550) #28	Neto2 (ENSMOCG00000000575) #29	ENSMOCG00000006972 #30	Gpt2 (ENSMOCG00000016944) #31	4921524J17Rik (ENSMOCG00000022491) #32	Mylk3 (ENSMOCG00000008937) #33	Orc6 (ENSMOCG00000020756) #34	Vps35 (ENSMOCG00000002997) #35	ENSMOCG00000006321	Man2b1 (ENSMOCG00000019337)	Wdr83os (ENSMOCG00000000084)
Murinae	ANCESTRAL SPECIES	15	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.y.b #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000164424	ENSGT00950000182755.b.a.a.a.a.a.b.d.b	ENSGT01030000234638.b.a.a
Mus	ANCESTRAL SPECIES	6	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.y.b #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000164424	ENSGT00950000182755.b.a.a.a.a.a.b.d.b	ENSGT01030000234638.b.a.a
Mus_A	ANCESTRAL SPECIES	8	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.y.b #23	ENSGT00860000136300	ENSGT00940000154837.f.y.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000164424
Mus_B	ANCESTRAL SPECIES	6	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.y.b #23	ENSGT00860000136300	ENSGT00940000154837.f.y.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000164424
Mouse	MODERN SPECIES	17	Gm19935 (ENSMUSG00000110332)	Tox3 (ENSMUSG00000043668) #8	Sall1 (ENSMUSG00000031665) #9	Cyld (ENSMUSG00000036712) #10	Nod2 (ENSMUSG00000055994) #11	Snx20 (ENSMUSG00000031662) #12	Nkd1 (ENSMUSG00000031661) #13	Brd7 (ENSMUSG00000031660) #14	Adcy7 (ENSMUSG00000031659) #15	Tent4b (ENSMUSG00000036779) #16	Heatr3 (ENSMUSG00000031657) #17	Cnep1r1 (ENSMUSG00000036810) #18	Zfp423 (ENSMUSG00000045333) #19	4933402J07Rik (ENSMUSG00000069971) #20	Cbln1 (ENSMUSG00000031654) #21	N4bp1 (ENSMUSG00000031652) #22	Siah1a (ENSMUSG00000036840) #23	Lonp2 (ENSMUSG00000047866) #24	Abcc12 (ENSMUSG00000036872) #26	Phkb (ENSMUSG00000036879) #27	Itfg1 (ENSMUSG00000031703) #28	Neto2 (ENSMUSG00000036902) #29	Dnaja2 (ENSMUSG00000031701) #30	Gpt2 (ENSMUSG00000031700) #31	4921524J17Rik (ENSMUSG00000036934) #32	Mylk3 (ENSMUSG00000031698) #33	Orc6 (ENSMUSG00000031697) #34	Vps35 (ENSMUSG00000031696) #35	Or7c19 (ENSMUSG00000051952)	Cks1brt (ENSMUSG00000062687)	Zfp791 (ENSMUSG00000074194)
Mus_C	ANCESTRAL SPECIES	5	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.y.b #23	ENSGT00860000136300	ENSGT00940000154837.f.y.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000164424
Steppe mouse	MODERN SPECIES	3149								Tent4b (ENSMSIG00000015046) #16	Heatr3 (ENSMSIG00000014972) #17	Cnep1r1 (ENSMSIG00000014910) #18	Zfp423 (ENSMSIG00000014783) #19	ENSMSIG00000014762	4933402J07Rik (ENSMSIG00000014743) #20	Cbln1 (ENSMSIG00000014701) #21	ENSMSIG00000014694	N4bp1 (ENSMSIG00000014641) #22	ENSMSIG00000014629 #23	Lonp2 (ENSMSIG00000014552) #24	Abcc12 (ENSMSIG00000014487) #26	ENSMSIG00000014471	Phkb (ENSMSIG00000014316) #27	ENSMSIG00000014284 #28
spretus	MODERN SPECIES	17	Tox3 (MGP_SPRETEiJ_G0032482) #8	MGP_SPRETEiJ_G0032481	Sall1 (MGP_SPRETEiJ_G0032480) #9	Cyld (MGP_SPRETEiJ_G0032479) #10	Nod2 (MGP_SPRETEiJ_G0032478) #11	Snx20 (MGP_SPRETEiJ_G0032477) #12	Nkd1 (MGP_SPRETEiJ_G0032476) #13	Brd7 (MGP_SPRETEiJ_G0032475) #14	Adcy7 (MGP_SPRETEiJ_G0032474) #15	Tent4b (MGP_SPRETEiJ_G0032473) #16	Heatr3 (MGP_SPRETEiJ_G0032472) #17	Cnep1r1 (MGP_SPRETEiJ_G0032471) #18	Zfp423 (MGP_SPRETEiJ_G0032470) #19	4933402J07Rik (MGP_SPRETEiJ_G0032469) #20	Cbln1 (MGP_SPRETEiJ_G0032468) #21	N4bp1 (MGP_SPRETEiJ_G0032467) #22	MGP_SPRETEiJ_G0032466	MGP_SPRETEiJ_G0032465 #23	Lonp2 (MGP_SPRETEiJ_G0032464) #24	Abcc12 (MGP_SPRETEiJ_G0032463) #26	Phkb (MGP_SPRETEiJ_G0032462) #27	Itfg1 (MGP_SPRETEiJ_G0032461) #28	Neto2 (MGP_SPRETEiJ_G0032460) #29	MGP_SPRETEiJ_G0032459	Dnaja2 (MGP_SPRETEiJ_G0032458) #30	Gpt2 (MGP_SPRETEiJ_G0032457) #31	Mylk3 (MGP_SPRETEiJ_G0032456) #33	Orc6 (MGP_SPRETEiJ_G0032455) #34	Vps35 (MGP_SPRETEiJ_G0032454) #35	Or7c19 (MGP_SPRETEiJ_G0032453)	Zfp791 (MGP_SPRETEiJ_G0032452)
Ryukyu mouse	MODERN SPECIES	17	Chd9 (MGP_CAROLIEiJ_G0031364)	Tox3 (MGP_CAROLIEiJ_G0031363) #8	Sall1 (MGP_CAROLIEiJ_G0031362) #9	Cyld (MGP_CAROLIEiJ_G0031361) #10	Nod2 (MGP_CAROLIEiJ_G0031360) #11	Snx20 (MGP_CAROLIEiJ_G0031359) #12	Nkd1 (MGP_CAROLIEiJ_G0031358) #13	Brd7 (MGP_CAROLIEiJ_G0031357) #14	Adcy7 (MGP_CAROLIEiJ_G0031356) #15	Tent4b (MGP_CAROLIEiJ_G0031355) #16	Heatr3 (MGP_CAROLIEiJ_G0031354) #17	Cnep1r1 (MGP_CAROLIEiJ_G0031353) #18	Zfp423 (MGP_CAROLIEiJ_G0031352) #19	4933402J07Rik (MGP_CAROLIEiJ_G0031351) #20	Cbln1 (MGP_CAROLIEiJ_G0031350) #21	N4bp1 (MGP_CAROLIEiJ_G0031349) #22	MGP_CAROLIEiJ_G0031348	MGP_CAROLIEiJ_G0031347 #23	MGP_CAROLIEiJ_G0031346 #23	Lonp2 (MGP_CAROLIEiJ_G0031345) #24	Abcc12 (MGP_CAROLIEiJ_G0031344) #26	Phkb (MGP_CAROLIEiJ_G0031343) #27	Itfg1 (MGP_CAROLIEiJ_G0031342) #28	Neto2 (MGP_CAROLIEiJ_G0031341) #29	Dnaja2 (MGP_CAROLIEiJ_G0031340) #30	Gpt2 (MGP_CAROLIEiJ_G0031339) #31	4921524J17Rik (MGP_CAROLIEiJ_G0031338) #32	Mylk3 (MGP_CAROLIEiJ_G0031337) #33	Orc6 (MGP_CAROLIEiJ_G0031336) #34	Vps35 (MGP_CAROLIEiJ_G0031335) #35	Or7c19 (MGP_CAROLIEiJ_G0031334)
Shrew mouse	MODERN SPECIES	12	Rbl2 (MGP_PahariEiJ_G0022965)	Chd9 (MGP_PahariEiJ_G0022964)	MGP_PahariEiJ_G0022963	Tox3 (MGP_PahariEiJ_G0022962) #8	Sall1 (MGP_PahariEiJ_G0022961) #9	Cyld (MGP_PahariEiJ_G0022960) #10	Nod2 (MGP_PahariEiJ_G0022959) #11	Snx20 (MGP_PahariEiJ_G0022958) #12	Nkd1 (MGP_PahariEiJ_G0022957) #13	Brd7 (MGP_PahariEiJ_G0022956) #14	Adcy7 (MGP_PahariEiJ_G0022955) #15	Tent4b (MGP_PahariEiJ_G0022954) #16	Zfp423 (MGP_PahariEiJ_G0022953) #19	4933402J07Rik (MGP_PahariEiJ_G0022952) #20	Cbln1 (MGP_PahariEiJ_G0022951) #21	N4bp1 (MGP_PahariEiJ_G0022950) #22	Siah1a (MGP_PahariEiJ_G0022949) #23	Lonp2 (MGP_PahariEiJ_G0022948) #24	Abcc12 (MGP_PahariEiJ_G0022947) #26	Phkb (MGP_PahariEiJ_G0022946) #27	MGP_PahariEiJ_G0022945 #29	MGP_PahariEiJ_G0022944	Dnaja2 (MGP_PahariEiJ_G0022943) #30	Gpt2 (MGP_PahariEiJ_G0022942) #31	Mylk3 (MGP_PahariEiJ_G0022941) #33	Orc6 (MGP_PahariEiJ_G0022940) #34	Vps35 (MGP_PahariEiJ_G0022939) #35	Or7c19 (MGP_PahariEiJ_G0022938)	Zfp791 (MGP_PahariEiJ_G0022937)	Man2b1 (MGP_PahariEiJ_G0022936)	Wdr83 (MGP_PahariEiJ_G0022935)
Rat	MODERN SPECIES	10	ENSRNOG00000069574	Sall1 (ENSRNOG00000013907) #9	Cyld (ENSRNOG00000014048) #10	Nod2 (ENSRNOG00000014124) #11	Snx20 (ENSRNOG00000014202) #12	Nkd1 (ENSRNOG00000014293) #13	Brd7 (ENSRNOG00000014419) #14	Adcy7 (ENSRNOG00000014776) #15	Tent4b (ENSRNOG00000024212) #16	Heatr3 (ENSRNOG00000015459) #17	Cnep1r1 (ENSRNOG00000015534) #18	Zfp423 (ENSRNOG00000014658) #19	LOC680913 (ENSRNOG00000024182) #20	Cbln1 (ENSRNOG00000000010) #21	Rps15a-ps3 (ENSRNOG00000055046)	N4bp1 (ENSRNOG00000015121) #22	Siah1 (ENSRNOG00000015143) #23	Lonp2 (ENSRNOG00000015162) #24	Abcc12 (ENSRNOG00000015666) #26	Phkb (ENSRNOG00000024101) #27	Itfg1 (ENSRNOG00000015843) #28	Neto2 (ENSRNOG00000016245) #29	Dnaja2 (ENSRNOG00000016251) #30	Gpt2 (ENSRNOG00000059579) #31	RGD1308706 (ENSRNOG00000017090) #32	ENSRNOG00000070220	AC131806.3 (ENSRNOG00000058218)	Mylk3 (ENSRNOG00000017546) #33	Orc6 (ENSRNOG00000024043) #34	Vps35 (ENSRNOG00000017612) #35	Or7c19 (ENSRNOG00000017868)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1802														4933402J07Rik (ENSNGAG00000012355) #20	Cbln1 (ENSNGAG00000012727) #21	N4bp1 (ENSNGAG00000013195) #22	ENSNGAG00000013502 #23	Lonp2 (ENSNGAG00000014764) #24	ENSNGAG00000015300	Abcc12 (ENSNGAG00000016447) #26	ENSNGAG00000002305
Kangaroo rat	MODERN SPECIES	425	Tox3 (ENSDORG00000003305) #8	ENSDORG00000004249 #9	Cyld (ENSDORG00000004192) #10	Nod2 (ENSDORG00000026607) #11	ENSDORG00000029324 #12	Nkd1 (ENSDORG00000008529) #13	Brd7 (ENSDORG00000010508) #14	Adcy7 (ENSDORG00000010503) #15	Tent4b (ENSDORG00000000031) #16	Heatr3 (ENSDORG00000004409) #17	ENSDORG00000026472 #18	Zfp423 (ENSDORG00000023772) #19	ENSDORG00000001017 #20	Cbln1 (ENSDORG00000025356) #21	ENSDORG00000024454	N4bp1 (ENSDORG00000002154) #22	ENSDORG00000025633 #23	Lonp2 (ENSDORG00000008240) #24	Abcc12 (ENSDORG00000008328) #26	Phkb (ENSDORG00000003977) #27
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000175746.a.a	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a
Marmotini	ANCESTRAL SPECIES	17	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000175746.a.a.a	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000175746.a.a.a	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a
Arctic ground squirrel	MODERN SPECIES	446												ZNF423 (ENSUPAG00010005254) #19	ENSUPAG00010005243 #20	CBLN1 (ENSUPAG00010005237) #21	ENSUPAG00010005232	N4BP1 (ENSUPAG00010005221) #22	ENSUPAG00010005216	SIAH1 (ENSUPAG00010005210) #23	ENSUPAG00010005197 #24
Squirrel	MODERN SPECIES	75	CHD9 (ENSSTOG00000022273)	TOX3 (ENSSTOG00000009587) #8	SALL1 (ENSSTOG00000020885) #9	CYLD (ENSSTOG00000010194) #10	NOD2 (ENSSTOG00000025139) #11	SNX20 (ENSSTOG00000031296) #12	NKD1 (ENSSTOG00000027729) #13	BRD7 (ENSSTOG00000024547) #14	ADCY7 (ENSSTOG00000001199) #15	ENSSTOG00000001196 #16	HEATR3 (ENSSTOG00000001183) #17	CNEP1R1 (ENSSTOG00000001179) #18	ZNF423 (ENSSTOG00000028569) #19	ENSSTOG00000005303 #20	CBLN1 (ENSSTOG00000027557) #21	N4BP1 (ENSSTOG00000006205) #22	SIAH1 (ENSSTOG00000008805) #23	LONP2 (ENSSTOG00000008780) #24	ABCC12 (ENSSTOG00000028133) #26	PHKB (ENSSTOG00000007705) #27	ITFG1 (ENSSTOG00000007671) #28	NETO2 (ENSSTOG00000004037) #29	ENSSTOG00000031645	DNAJA2 (ENSSTOG00000004007) #30	GPT2 (ENSSTOG00000014851) #31	C16orf87 (ENSSTOG00000027329) #32	MYLK3 (ENSSTOG00000003802) #33	ORC6 (ENSSTOG00000003785) #34	VPS35 (ENSSTOG00000003772) #35	ENSSTOG00000025341
Alpin marmot	MODERN SPECIES	23	CHD9NB (ENSMMMG00000012935)	TOX3 (ENSMMMG00000012986) #8	SALL1 (ENSMMMG00000013047) #9	CYLD (ENSMMMG00000013093) #10	NOD2 (ENSMMMG00000013415) #11	SNX20 (ENSMMMG00000013445) #12	NKD1 (ENSMMMG00000013451) #13	BRD7 (ENSMMMG00000013473) #14	ADCY7 (ENSMMMG00000013505) #15	ENSMMMG00000014304 #16	HEATR3 (ENSMMMG00000014311) #17	CNEP1R1 (ENSMMMG00000014341) #18	ZNF423 (ENSMMMG00000014383) #19	ENSMMMG00000014403 #20	CBLN1 (ENSMMMG00000014438) #21	N4BP1 (ENSMMMG00000014453) #22	ENSMMMG00000014456	ENSMMMG00000014468	SIAH1 (ENSMMMG00000014478) #23	LONP2 (ENSMMMG00000014489) #24	ABCC11 (ENSMMMG00000014520)	ABCC12 (ENSMMMG00000014549) #26	ENSMMMG00000014636	PHKB (ENSMMMG00000014653) #27	ITFG1 (ENSMMMG00000014700) #28	NETO2 (ENSMMMG00000015229) #29	ENSMMMG00000015252 #30	GPT2 (ENSMMMG00000015258) #31	ENSMMMG00000015275	C16orf87 (ENSMMMG00000015312) #32	MYLK3 (ENSMMMG00000015317) #33
Eurasian red squirrel	MODERN SPECIES	8	NOD2 (ENSSVLG00005025812) #11	SNX20 (ENSSVLG00005025820) #12	NKD1 (ENSSVLG00005025829) #13	ENSSVLG00005025838 #14	ADCY7 (ENSSVLG00005025857) #15	TENT4B (ENSSVLG00005025875) #16	HEATR3 (ENSSVLG00005025878) #17	ENSSVLG00005025884 #18	ENSSVLG00005025890	ENSSVLG00005025893	ENSSVLG00005025899	ZNF423 (ENSSVLG00005016875) #19	ENSSVLG00005016966 #20	CBLN1 (ENSSVLG00005017023) #21	ENSSVLG00005017072	N4BP1 (ENSSVLG00005017117) #22	ENSSVLG00005017168	SIAH1 (ENSSVLG00005017212) #23	LONP2 (ENSSVLG00005017285) #24	ABCC11 (ENSSVLG00005017407)	ABCC12 (ENSSVLG00005018066) #26	ENSSVLG00005018386 #27	ITFG1 (ENSSVLG00005018515) #28	NETO2 (ENSSVLG00005018574) #29	ENSSVLG00005018635	ENSSVLG00005018657 #30	GPT2 (ENSSVLG00005018752) #31	C16orf87 (ENSSVLG00005018828) #32	ENSSVLG00005018900	MYLK3 (ENSSVLG00005018924) #33	ENSSVLG00005019080 #34
Hystricomorpha	ANCESTRAL SPECIES	72																ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370.r #34	ENSGT00390000007315 #35	ENSGT00940000161310
Hystricomorpha_a	ANCESTRAL SPECIES	68	ENSGT00940000155133.b	ENSGT00940000153692.A	ENSGT00950000183015.D	ENSGT00940000155680.d	ENSGT00940000158223	ENSGT00940000160897	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.p	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370.r #34	ENSGT00390000007315 #35	ENSGT00940000161310
Hystricomorpha_b	ANCESTRAL SPECIES	45	ENSGT00940000155133.b	ENSGT00940000153692.A	ENSGT00950000183015.D	ENSGT00940000155680.d	ENSGT00940000158223	ENSGT00940000160897	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.p	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00910000144305	ENSGT00940000154674	ENSGT00940000161551	ENSGT00940000157819	ENSGT01050000244888.b.a.c.b	ENSGT00940000160269	ENSGT00940000154200.B
Long-tailed chinchilla	MODERN SPECIES	181	SLC10A6 (ENSCLAG00000006091)	PTPN13 (ENSCLAG00000006187)	MAPK10 (ENSCLAG00000007752)	ARHGAP24 (ENSCLAG00000004468)	WDFY3 (ENSCLAG00000004977)	CDS1 (ENSCLAG00000006900)	GPAT3 (ENSCLAG00000007713)	ABRAXAS1 (ENSCLAG00000008039)	ENSCLAG00000008205	HELQ (ENSCLAG00000004733)	HPSE (ENSCLAG00000004879)	ENSCLAG00000004962	PLAC8 (ENSCLAG00000005017)	COPS4 (ENSCLAG00000005060)	LIN54 (ENSCLAG00000006502)	N4BP1 (ENSCLAG00000006600) #22	SIAH1 (ENSCLAG00000006639) #23	LONP2 (ENSCLAG00000006722) #24	ABCC12 (ENSCLAG00000006887) #26	PHKB (ENSCLAG00000007130) #27	ITFG1 (ENSCLAG00000007967) #28	NETO2 (ENSCLAG00000008739) #29	ENSCLAG00000002868 #30	GPT2 (ENSCLAG00000003182) #31	ENSCLAG00000003230	HLTF (ENSCLAG00000003408)	GYG1 (ENSCLAG00000003920)	CPA3 (ENSCLAG00000004064)	CPB1 (ENSCLAG00000004152)	AGTR1 (ENSCLAG00000004411)	ZIC1 (ENSCLAG00000006845)
Degu	MODERN SPECIES	69	CDS1 (ENSODEG00000008599)	NKX6-1 (ENSODEG00000009272)	ENSODEG00000007028	ENSODEG00000007416	ENSODEG00000019508	ENSODEG00000008639	ENSODEG00000008636	ABRAXAS1 (ENSODEG00000009343)	ENSODEG00000007599	HELQ (ENSODEG00000008738)	HPSE (ENSODEG00000007894)	COQ2 (ENSODEG00000007764)	PLAC8 (ENSODEG00000008537)	ENSODEG00000008788	LIN54 (ENSODEG00000009071)	N4BP1 (ENSODEG00000009642) #22	SIAH1 (ENSODEG00000010400) #23	ENSODEG00000007971 #24	ENSODEG00000009232 #24	ABCC12 (ENSODEG00000010786) #26	PHKB (ENSODEG00000008822) #27	ITFG1 (ENSODEG00000007883) #28	ENSODEG00000008342	NETO2 (ENSODEG00000008553) #29	ENSODEG00000007831 #30	GPT2 (ENSODEG00000008090) #31	HLTF (ENSODEG00000009415)	ENSODEG00000009053	CPA3 (ENSODEG00000008292)	CPB1 (ENSODEG00000011062)	AGTR1 (ENSODEG00000019590)
Guinea pig	MODERN SPECIES	33	SLC10A6 (ENSCPOG00000010363)	PTPN13 (ENSCPOG00000007122)	MAPK10 (ENSCPOG00000013605)	ARHGAP24 (ENSCPOG00000012796)	WDFY3 (ENSCPOG00000006746)	CDS1 (ENSCPOG00000030064)	GPAT3 (ENSCPOG00000014802)	ABRAXAS1 (ENSCPOG00000001374)	MRPS18C (ENSCPOG00000009198)	HELQ (ENSCPOG00000009180)	HPSE (ENSCPOG00000001853)	COQ2 (ENSCPOG00000035211)	PLAC8 (ENSCPOG00000026026)	COPS4 (ENSCPOG00000020170)	LIN54 (ENSCPOG00000001139)	N4BP1 (ENSCPOG00000022635) #22	SIAH1 (ENSCPOG00000020708) #23	LONP2 (ENSCPOG00000003859) #24	ABCC12 (ENSCPOG00000006873) #26	PHKB (ENSCPOG00000006408) #27	ITFG1 (ENSCPOG00000006398) #28	NETO2 (ENSCPOG00000011813) #29	ENSCPOG00000006955 #30	GPT2 (ENSCPOG00000013685) #31	C16orf87 (ENSCPOG00000010228) #32	MYLK3 (ENSCPOG00000003786) #33	ORC6 (ENSCPOG00000003779) #34	VPS35 (ENSCPOG00000003773) #35	SHCBP1 (ENSCPOG00000023425)	PTCHD3 (ENSCPOG00000026866)	ENSCPOG00000032879
Naked mole-rat female	MODERN SPECIES	27	ENSHGLG00000012755	TFDP2 (ENSHGLG00000013441)	ENSHGLG00000033455	GK5 (ENSHGLG00000014374)	XRN1 (ENSHGLG00000014476)	ATR (ENSHGLG00000016875)	TRPC1 (ENSHGLG00000017039)	ENSHGLG00000048356	PCOLCE2 (ENSHGLG00000017054)	PAQR9 (ENSHGLG00000017213)	U2SURP (ENSHGLG00000017227)	CHST2 (ENSHGLG00000041521)	ENSHGLG00000018200	ENSHGLG00000011825	ENSHGLG00000044802	ENSHGLG00000019576 #22	ENSHGLG00000003222	SIAH1 (ENSHGLG00000003142) #23	ENSHGLG00000003081 #24	ENSHGLG00000048075	ENSHGLG00000003031	ENSHGLG00000039002	ENSHGLG00000047723	ENSHGLG00000048126	ENSHGLG00000012004	ENSHGLG00000032846 #34	PHKB (ENSHGLG00000002597) #27	ITFG1 (ENSHGLG00000002469) #28	NETO2 (ENSHGLG00000002342) #29	ENSHGLG00000002300	ENSHGLG00000002271
Lagomorpha	ANCESTRAL SPECIES	175				ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26
Rabbit	MODERN SPECIES	465				CYLD (ENSOCUG00000012853) #10	NOD2 (ENSOCUG00000012840) #11	SNX20 (ENSOCUG00000005239) #12	NKD1 (ENSOCUG00000005228) #13	BRD7 (ENSOCUG00000003102) #14	ADCY7 (ENSOCUG00000003091) #15	TENT4B (ENSOCUG00000014750) #16	HEATR3 (ENSOCUG00000014184) #17	CNEP1R1 (ENSOCUG00000005923) #18	ZNF423 (ENSOCUG00000003685) #19	C16orf78 (ENSOCUG00000002911) #20	CBLN1 (ENSOCUG00000000990) #21	N4BP1 (ENSOCUG00000012740) #22	SIAH1 (ENSOCUG00000004814) #23	LONP2 (ENSOCUG00000007288) #24	ABCC11 (ENSOCUG00000002039)	ABCC12 (ENSOCUG00000002029) #26
Tree shrew	MODERN SPECIES	6102																N4BP1 (ENSTBEG00000003709) #22
Primates	ANCESTRAL SPECIES	21	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315.d #35	ENSGT00940000161310
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00390000016567.f	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315.d #35
Hominidae	ANCESTRAL SPECIES	9	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00390000016567.f	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315.d #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00390000016567.f	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315.d #35
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00390000016567.f	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315.d #35
Pan	ANCESTRAL SPECIES	19	ENSGT01030000234542.b.a.a.a.b.b	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00390000016567.f	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00910000147721	ENSGT00390000008099.w.b.c.a	ENSGT00940000153336.e.a.a.a.b.a.a	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32
Chimpanzee	MODERN SPECIES	7	ENSPTRG00000045090	TOX3 (ENSPTRG00000008110) #8	SALL1 (ENSPTRG00000008108) #9	CYLD (ENSPTRG00000008107) #10	NOD2 (ENSPTRG00000008106) #11	SNX20 (ENSPTRG00000008105) #12	NKD1 (ENSPTRG00000008104) #13	BRD7 (ENSPTRG00000008103) #14	ADCY7 (ENSPTRG00000008102) #15	TENT4B (ENSPTRG00000008101) #16	HEATR3 (ENSPTRG00000008100) #17	CNEP1R1 (ENSPTRG00000041682) #18	ZNF423 (ENSPTRG00000008099) #19	C16H16orf78 (ENSPTRG00000008098) #20	CBLN1 (ENSPTRG00000008097) #21	N4BP1 (ENSPTRG00000008096) #22	ENSPTRG00000051824	SIAH1 (ENSPTRG00000008094) #23	LONP2 (ENSPTRG00000008093) #24	ABCC11 (ENSPTRG00000008092)	ABCC12 (ENSPTRG00000008091) #26	ENSPTRG00000051119	ENSPTRG00000050539	ENSPTRG00000046984	PHKB (ENSPTRG00000008090) #27	ITFG1 (ENSPTRG00000008089) #28	NETO2 (ENSPTRG00000008087) #29	ENSPTRG00000047701	DNAJA2 (ENSPTRG00000008085) #30	GPT2 (ENSPTRG00000008084) #31	C16H16orf87 (ENSPTRG00000008082) #32
Bonobo	MODERN SPECIES	7	ENSPPAG00000030984	TOX3 (ENSPPAG00000042135) #8	SALL1 (ENSPPAG00000035657) #9	CYLD (ENSPPAG00000027949) #10	NOD2 (ENSPPAG00000042973) #11	SNX20 (ENSPPAG00000031596) #12	ENSPPAG00000017627 #13	BRD7 (ENSPPAG00000038742) #14	ADCY7 (ENSPPAG00000026254) #15	TENT4B (ENSPPAG00000033650) #16	HEATR3 (ENSPPAG00000040469) #17	CNEP1R1 (ENSPPAG00000028006) #18	ZNF423 (ENSPPAG00000038999) #19	C16orf78 (ENSPPAG00000030795) #20	CBLN1 (ENSPPAG00000037058) #21	N4BP1 (ENSPPAG00000034858) #22	ENSPPAG00000030753	SIAH1 (ENSPPAG00000031633) #23	LONP2 (ENSPPAG00000033002) #24	ABCC11 (ENSPPAG00000043908)	ABCC12 (ENSPPAG00000028717) #26	ENSPPAG00000011862	ENSPPAG00000033278	ENSPPAG00000030041	PHKB (ENSPPAG00000034914) #27	ITFG1 (ENSPPAG00000040718) #28	NETO2 (ENSPPAG00000032711) #29	ENSPPAG00000031174	DNAJA2 (ENSPPAG00000012449) #30	GPT2 (ENSPPAG00000036585) #31	C16orf87 (ENSPPAG00000038293) #32
Human	MODERN SPECIES	7	TOX3 (ENSG00000103460) #8	HNRNPA1L3 (ENSG00000224578)	SALL1 (ENSG00000103449) #9	CYLD (ENSG00000083799) #10	NOD2 (ENSG00000167207) #11	SNX20 (ENSG00000167208) #12	NKD1 (ENSG00000140807) #13	BRD7 (ENSG00000166164) #14	ADCY7 (ENSG00000121281) #15	TENT4B (ENSG00000121274) #16	HEATR3 (ENSG00000155393) #17	CNEP1R1 (ENSG00000205423) #18	ZNF423 (ENSG00000102935) #19	C16orf78 (ENSG00000166152) #20	CBLN1 (ENSG00000102924) #21	N4BP1 (ENSG00000102921) #22	SIAH1 (ENSG00000196470) #23	LONP2 (ENSG00000102910) #24	ABCC11 (ENSG00000121270)	ABCC12 (ENSG00000140798) #26	PHKB (ENSG00000102893) #27	ITFG1 (ENSG00000129636) #28	NETO2 (ENSG00000171208) #29	DNAJA2 (ENSG00000069345) #30	GPT2 (ENSG00000166123) #31	C16orf87 (ENSG00000155330) #32	MYLK3 (ENSG00000140795) #33	ORC6 (ENSG00000091651) #34	VPS35 (ENSG00000069329) #35	SHCBP1 (ENSG00000171241)	ENSG00000284209
Gorilla	MODERN SPECIES	7	ENSGGOG00000036262	TOX3 (ENSGGOG00000009117) #8	SALL1 (ENSGGOG00000000663) #9	CYLD (ENSGGOG00000008448) #10	NOD2 (ENSGGOG00000010795) #11	SNX20 (ENSGGOG00000042612) #12	NKD1 (ENSGGOG00000008141) #13	ENSGGOG00000014824 #14	ADCY7 (ENSGGOG00000014807) #15	TENT4B (ENSGGOG00000006316) #16	HEATR3 (ENSGGOG00000000878) #17	CNEP1R1 (ENSGGOG00000025211) #18	ZNF423 (ENSGGOG00000016641) #19	C16orf78 (ENSGGOG00000008081) #20	CBLN1 (ENSGGOG00000015205) #21	N4BP1 (ENSGGOG00000015565) #22	ENSGGOG00000026977	SIAH1 (ENSGGOG00000000938) #23	LONP2 (ENSGGOG00000006559) #24	ABCC11 (ENSGGOG00000005674)	ABCC12 (ENSGGOG00000004009) #26	ENSGGOG00000036580	ENSGGOG00000038408	PHKB (ENSGGOG00000003010) #27	ITFG1 (ENSGGOG00000003004) #28	NETO2 (ENSGGOG00000007529) #29	ENSGGOG00000025028	DNAJA2 (ENSGGOG00000005200) #30	GPT2 (ENSGGOG00000016287) #31	C16orf87 (ENSGGOG00000041597) #32	MYLK3 (ENSGGOG00000011020) #33
Orangutan	MODERN SPECIES	7	TOX3 (ENSPPYG00000007346) #8	ENSPPYG00000040133	CYLD (ENSPPYG00000007344) #10	NOD2 (ENSPPYG00000007343) #11	SNX20 (ENSPPYG00000035536) #12	NKD1 (ENSPPYG00000007340) #13	BRD7 (ENSPPYG00000007339) #14	ADCY7 (ENSPPYG00000007338) #15	TENT4B (ENSPPYG00000007337) #16	HEATR3 (ENSPPYG00000007336) #17	CNEP1R1 (ENSPPYG00000007335) #18	ENSPPYG00000035778	ZNF423 (ENSPPYG00000007334) #19	C16orf78 (ENSPPYG00000007333) #20	CBLN1 (ENSPPYG00000007331) #21	N4BP1 (ENSPPYG00000007330) #22	SIAH1 (ENSPPYG00000031045) #23	LONP2 (ENSPPYG00000007328) #24	ABCC11 (ENSPPYG00000007327)	ABCC12 (ENSPPYG00000007326) #26	ENSPPYG00000038100	PHKB (ENSPPYG00000007325) #27	ITFG1 (ENSPPYG00000007324) #28	NETO2 (ENSPPYG00000007323) #29	ENSPPYG00000007322	DNAJA2 (ENSPPYG00000007321) #30	GPT2 (ENSPPYG00000007320) #31	ENSPPYG00000007729 #32	MYLK3 (ENSPPYG00000007730) #33	ORC6 (ENSPPYG00000007731) #34	VPS35 (ENSPPYG00000007732) #35
Gibbon	MODERN SPECIES	11	ENSNLEG00000013975	ENSNLEG00000034210 #8	SALL1 (ENSNLEG00000001008) #9	CYLD (ENSNLEG00000000923) #10	NOD2 (ENSNLEG00000000910) #11	SNX20 (ENSNLEG00000033286) #12	NKD1 (ENSNLEG00000029864) #13	BRD7 (ENSNLEG00000000834) #14	ADCY7 (ENSNLEG00000000816) #15	TENT4B (ENSNLEG00000000797) #16	HEATR3 (ENSNLEG00000000745) #17	CNEP1R1 (ENSNLEG00000034194) #18	ZNF423 (ENSNLEG00000000697) #19	C16orf78 (ENSNLEG00000027879) #20	CBLN1 (ENSNLEG00000000675) #21	N4BP1 (ENSNLEG00000000653) #22	ENSNLEG00000033251	SIAH1 (ENSNLEG00000035150) #23	LONP2 (ENSNLEG00000000605) #24	ABCC12 (ENSNLEG00000000497) #26	PHKB (ENSNLEG00000015813) #27	ENSNLEG00000027311	ENSNLEG00000027255	ITFG1 (ENSNLEG00000015744) #28	NETO2 (ENSNLEG00000015738) #29	DNAJA2 (ENSNLEG00000015696) #30	ENSNLEG00000030783	GPT2 (ENSNLEG00000015678) #31	C16orf87 (ENSNLEG00000015672) #32	ENSNLEG00000015670 #33	ENSNLEG00000013115 #34
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00940000158043 #8	ENSGT01020000230346.C.c.a.b.a	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00390000005105	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315.d #35	ENSGT00940000161310
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00940000158043 #8	ENSGT01020000230346.C.c.a.b.a	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00390000005105	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315.d #35	ENSGT00940000161310
Vervet Monkey	MODERN SPECIES	24	CHD9 (ENSCSAG00000005311)	TOX3 (ENSCSAG00000005317) #8	SALL1 (ENSCSAG00000005319) #9	CYLD (ENSCSAG00000005324) #10	NOD2 (ENSCSAG00000005331) #11	SNX20 (ENSCSAG00000005339) #12	NKD1 (ENSCSAG00000005349) #13	BRD7 (ENSCSAG00000005361) #14	ADCY7 (ENSCSAG00000005371) #15	TENT4B (ENSCSAG00000005390) #16	HEATR3 (ENSCSAG00000005398) #17	CNEP1R1 (ENSCSAG00000005400) #18	ZNF423 (ENSCSAG00000005405) #19	C16orf78 (ENSCSAG00000005410) #20	CBLN1 (ENSCSAG00000005415) #21	N4BP1 (ENSCSAG00000005417) #22	SIAH1 (ENSCSAG00000005422) #23	ENSCSAG00000018862	LONP2 (ENSCSAG00000005425) #24	ABCC11 (ENSCSAG00000005454)	ABCC12 (ENSCSAG00000005497) #26	PHKB (ENSCSAG00000005516) #27	ITFG1 (ENSCSAG00000005522) #28	NETO2 (ENSCSAG00000005537) #29	ENSCSAG00000005547 #30	GPT2 (ENSCSAG00000005551) #31	C16orf87 (ENSCSAG00000005553) #32	MYLK3 (ENSCSAG00000005556) #33	ORC6 (ENSCSAG00000005565) #34	VPS35 (ENSCSAG00000005571) #35	SHCBP1 (ENSCSAG00000005573)
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00940000158043 #8	ENSGT01020000230346.C.c.a.b.a	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00910000147721	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00390000005105	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315.d #35
Macaca	ANCESTRAL SPECIES	8	ENSGT00940000158043 #8	ENSGT01020000230346.C.c.a.b.a	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00910000147721	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315.d #35
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000166898.a.a.b.b.a.a.a.b.b.a.a.b.b.a.a.b.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.b.a.a.a.a.b.a.a.a.a.b.b	ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.b.b.a.b.b	ENSGT00940000159811 #21	ENSGT01100000263509.a.a.b.b.a.b.b.b.a.a.a.a.b.a.b.b.a.a.b	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00390000007370 #34	ENSGT00390000007315.d #35	ENSGT00940000161310	ENSGT00940000162459.c.b.b.b	ENSGT00940000154453.b.a.a.b.a.c
Crab-eating macaque	MODERN SPECIES	12	ENSMFAG00000033996 #12	NKD1 (ENSMFAG00000044696) #13	BRD7 (ENSMFAG00000035566) #14	ADCY7 (ENSMFAG00000037814) #15	ENSMFAG00000002315 #16	HEATR3 (ENSMFAG00000002184) #17	CNEP1R1 (ENSMFAG00000001901) #18	ENSMFAG00000054799	ZNF423 (ENSMFAG00000045032) #19	C16orf78 (ENSMFAG00000001439) #20	ENSMFAG00000053236	ENSMFAG00000056302	ENSMFAG00000059766	CBLN1 (ENSMFAG00000003677) #21	ENSMFAG00000060549	N4BP1 (ENSMFAG00000025909) #22	ENSMFAG00000054625	ENSMFAG00000048671	SIAH1 (ENSMFAG00000045157) #23	LONP2 (ENSMFAG00000029975) #24	ABCC11 (ENSMFAG00000030745)	ABCC12 (ENSMFAG00000039229) #26	ENSMFAG00000052045	ENSMFAG00000017159	PHKB (ENSMFAG00000043545) #27	ITFG1 (ENSMFAG00000038548) #28	NETO2 (ENSMFAG00000000612) #29	DNAJA2 (ENSMFAG00000003461) #30	ENSMFAG00000054512	GPT2 (ENSMFAG00000033087) #31	C16orf87 (ENSMFAG00000061258) #32
Rhesus	MODERN SPECIES	12	TENT4B (ENSMMUG00000003116) #16	HEATR3 (ENSMMUG00000020065) #17	ENSMMUG00000051827	CNEP1R1 (ENSMMUG00000008365) #18	ENSMMUG00000065197	ZNF423 (ENSMMUG00000021261) #19	C20H16orf78 (ENSMMUG00000019881) #20	ENSMMUG00000057032	ENSMMUG00000061908	ENSMMUG00000059883	CBLN1 (ENSMMUG00000022217) #21	ENSMMUG00000053141	ENSMMUG00000054426	ENSMMUG00000056885	ENSMMUG00000061708	N4BP1 (ENSMMUG00000018978) #22	SIAH1 (ENSMMUG00000007400) #23	LONP2 (ENSMMUG00000007397) #24	ABCC11 (ENSMMUG00000008290)	ABCC12 (ENSMMUG00000002201) #26	PHKB (ENSMMUG00000004718) #27	ITFG1 (ENSMMUG00000004717) #28	NETO2 (ENSMMUG00000028921) #29	DNAJA2 (ENSMMUG00000002247) #30	GPT2 (ENSMMUG00000003288) #31	C20H16orf87 (ENSMMUG00000049708) #32	ORC6 (ENSMMUG00000011942) #34	VPS35 (ENSMMUG00000011940) #35	SHCBP1 (ENSMMUG00000012376)	ENSMMUG00000012407	ENSMMUG00000059064
Pig-tailed macaque	MODERN SPECIES	188	TOX3 (ENSMNEG00000031324) #8	ENSMNEG00000030103	SALL1 (ENSMNEG00000034770) #9	CYLD (ENSMNEG00000030288) #10	NOD2 (ENSMNEG00000032525) #11	SNX20 (ENSMNEG00000000544) #12	NKD1 (ENSMNEG00000029629) #13	BRD7 (ENSMNEG00000041585) #14	ADCY7 (ENSMNEG00000028598) #15	TENT4B (ENSMNEG00000036382) #16	HEATR3 (ENSMNEG00000044688) #17	CNEP1R1 (ENSMNEG00000040247) #18	ZNF423 (ENSMNEG00000007103) #19	C16orf78 (ENSMNEG00000044619) #20	CBLN1 (ENSMNEG00000039224) #21	N4BP1 (ENSMNEG00000035504) #22	SIAH1 (ENSMNEG00000032985) #23	LONP2 (ENSMNEG00000033321) #24	ABCC11 (ENSMNEG00000041830)	ABCC12 (ENSMNEG00000041035) #26	ENSMNEG00000020189	PHKB (ENSMNEG00000040305) #27	ITFG1 (ENSMNEG00000010412) #28	NETO2 (ENSMNEG00000037070) #29	ENSMNEG00000030871	DNAJA2 (ENSMNEG00000043155) #30	GPT2 (ENSMNEG00000036184) #31	C16orf87 (ENSMNEG00000039612) #32	MYLK3 (ENSMNEG00000037469) #33	ORC6 (ENSMNEG00000043380) #34	VPS35 (ENSMNEG00000038494) #35
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00910000147721	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00390000005105	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315.d #35
Olive baboon	MODERN SPECIES	9	SALL1 (ENSPANG00000024176) #9	CYLD (ENSPANG00000019153) #10	NOD2 (ENSPANG00000019150) #11	SNX20 (ENSPANG00000000812) #12	NKD1 (ENSPANG00000009782) #13	BRD7 (ENSPANG00000024571) #14	ADCY7 (ENSPANG00000011498) #15	TENT4B (ENSPANG00000006934) #16	HEATR3 (ENSPANG00000024573) #17	CNEP1R1 (ENSPANG00000016962) #18	ZNF423 (ENSPANG00000022231) #19	ENSPANG00000038448	C16orf78 (ENSPANG00000022694) #20	CBLN1 (ENSPANG00000009450) #21	ENSPANG00000051011	N4BP1 (ENSPANG00000007118) #22	LONP2 (ENSPANG00000016834) #24	SIAH1 (ENSPANG00000021505) #23	ABCC11 (ENSPANG00000015025)	ABCC12 (ENSPANG00000024451) #26	PHKB (ENSPANG00000017340) #27	ITFG1 (ENSPANG00000001301) #28	ENSPANG00000040531	NETO2 (ENSPANG00000026489) #29	DNAJA2 (ENSPANG00000008681) #30	GPT2 (ENSPANG00000007620) #31	ENSPANG00000044573	C16orf87 (ENSPANG00000018045) #32	MYLK3 (ENSPANG00000017645) #33	ORC6 (ENSPANG00000000625) #34	VPS35 (ENSPANG00000015747) #35
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00390000006350.m.a.c.a.lb.b	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00910000147721	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00390000005105	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315.d #35
Drill	MODERN SPECIES	1001										HEATR3 (ENSMLEG00000029177) #17	CNEP1R1 (ENSMLEG00000037462) #18	ZNF423 (ENSMLEG00000041391) #19	C16orf78 (ENSMLEG00000035013) #20	CBLN1 (ENSMLEG00000002999) #21	ENSMLEG00000037168	N4BP1 (ENSMLEG00000030992) #22	SIAH1 (ENSMLEG00000038118) #23	LONP2 (ENSMLEG00000034647) #24	ABCC11 (ENSMLEG00000033170)	ABCC12 (ENSMLEG00000029732) #26	ENSMLEG00000013619	ENSMLEG00000036067 #27	ENSMLEG00000024919
Sooty mangabey	MODERN SPECIES	96	SALL1 (ENSCATG00000004982) #9	CYLD (ENSCATG00000025694) #10	NOD2 (ENSCATG00000032818) #11	SNX20 (ENSCATG00000031155) #12	NKD1 (ENSCATG00000033443) #13	BRD7 (ENSCATG00000027818) #14	ENSCATG00000003671	ADCY7 (ENSCATG00000022081) #15	TENT4B (ENSCATG00000031641) #16	HEATR3 (ENSCATG00000021656) #17	CNEP1R1 (ENSCATG00000015240) #18	ZNF423 (ENSCATG00000034661) #19	C16orf78 (ENSCATG00000021615) #20	CBLN1 (ENSCATG00000042192) #21	ENSCATG00000028377	N4BP1 (ENSCATG00000036429) #22	SIAH1 (ENSCATG00000031876) #23	LONP2 (ENSCATG00000028734) #24	ABCC11 (ENSCATG00000036396)	ABCC12 (ENSCATG00000033549) #26	ENSCATG00000003133	PHKB (ENSCATG00000031431) #27	ITFG1 (ENSCATG00000032468) #28	ENSCATG00000031428	NETO2 (ENSCATG00000035156) #29	DNAJA2 (ENSCATG00000033759) #30	ENSCATG00000032159	GPT2 (ENSCATG00000035440) #31	C16orf87 (ENSCATG00000031280) #32	MYLK3 (ENSCATG00000033172) #33	ORC6 (ENSCATG00000042186) #34
Rhinopithecus	ANCESTRAL SPECIES	334																ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B.j #27	ENSGT00950000183118.B.i.b #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315.d #35	ENSGT00940000161310
Black snub-nosed monkey	MODERN SPECIES	46																N4BP1 (ENSRBIG00000035001) #22	SIAH1 (ENSRBIG00000033450) #23	LONP2 (ENSRBIG00000032072) #24	ABCC11 (ENSRBIG00000034888)	ABCC12 (ENSRBIG00000041328) #26	ENSRBIG00000015956	ENSRBIG00000041668	ENSRBIG00000041631 #27
Golden snub-nosed monkey	MODERN SPECIES	2968																N4BP1 (ENSRROG00000037371) #22	SIAH1 (ENSRROG00000035971) #23	LONP2 (ENSRROG00000026704) #24	ABCC11 (ENSRROG00000034803)	ABCC12 (ENSRROG00000033734) #26	ENSRROG00000012670	PHKB (ENSRROG00000033180) #27	ITFG1 (ENSRROG00000038711) #28	NETO2 (ENSRROG00000041130) #29	DNAJA2 (ENSRROG00000041281) #30	GPT2 (ENSRROG00000042469) #31	C16orf87 (ENSRROG00000027463) #32	MYLK3 (ENSRROG00000044699) #33	ORC6 (ENSRROG00000000515) #34	VPS35 (ENSRROG00000040561) #35	SHCBP1 (ENSRROG00000044250)
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.h #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000153336.e.a.a.a.b.a.a	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00390000005105	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Cebidae	ANCESTRAL SPECIES	21	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934.a #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.h #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000153336.e.a.a.a.b.a.a	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Cebidae_a	ANCESTRAL SPECIES	95	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934.a #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576.g.a #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000153336.e.a.a.a.b.a.a	ENSGT00950000183118.B.j #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Capuchin	MODERN SPECIES	63	SALL1 (ENSCCAG00000001639) #9	CYLD (ENSCCAG00000030271) #10	NOD2 (ENSCCAG00000034885) #11	ENSCCAG00000026084	SNX20 (ENSCCAG00000036877) #12	NKD1 (ENSCCAG00000033942) #13	ENSCCAG00000011713	BRD7 (ENSCCAG00000023437) #14	ADCY7 (ENSCCAG00000023487) #15	TENT4B (ENSCCAG00000035345) #16	HEATR3 (ENSCCAG00000031847) #17	ENSCCAG00000035613 #18	ZNF423 (ENSCCAG00000009645) #19	C16orf78 (ENSCCAG00000036138) #20	CBLN1 (ENSCCAG00000023628) #21	N4BP1 (ENSCCAG00000013512) #22	ENSCCAG00000023246	SIAH1 (ENSCCAG00000026445) #23	LONP2 (ENSCCAG00000013470) #24	ABCC11 (ENSCCAG00000020774)
Bolivian squirrel monkey	MODERN SPECIES	133	ENSSBOG00000032298	SALL1 (ENSSBOG00000032186) #9	CYLD (ENSSBOG00000023333) #10	NOD2 (ENSSBOG00000024291) #11	ENSSBOG00000025917	SNX20 (ENSSBOG00000029064) #12	NKD1 (ENSSBOG00000033910) #13	ENSSBOG00000029661 #14	ADCY7 (ENSSBOG00000030162) #15	TENT4B (ENSSBOG00000020525) #16	HEATR3 (ENSSBOG00000026626) #17	CNEP1R1 (ENSSBOG00000000332) #18	ZNF423 (ENSSBOG00000029124) #19	C16orf78 (ENSSBOG00000024244) #20	CBLN1 (ENSSBOG00000028668) #21	N4BP1 (ENSSBOG00000019911) #22	SIAH1 (ENSSBOG00000027075) #23	LONP2 (ENSSBOG00000010480) #24	ABCC11 (ENSSBOG00000030679)	ENSSBOG00000032333	PHKB (ENSSBOG00000013796) #27	ITFG1 (ENSSBOG00000033400) #28	NETO2 (ENSSBOG00000029707) #29	ENSSBOG00000035157	DNAJA2 (ENSSBOG00000026460) #30	GPT2 (ENSSBOG00000034808) #31	C16orf87 (ENSSBOG00000026255) #32	MYLK3 (ENSSBOG00000033739) #33	ORC6 (ENSSBOG00000018353) #34	VPS35 (ENSSBOG00000023629) #35	SHCBP1 (ENSSBOG00000032502)
Marmoset	MODERN SPECIES	12	ENSCJAG00000060946	ENSCJAG00000078065	ENSCJAG00000075236	SNX20 (ENSCJAG00000001791) #12	NKD1 (ENSCJAG00000001801) #13	BRD7 (ENSCJAG00000001832) #14	ADCY7 (ENSCJAG00000001898) #15	TENT4B (ENSCJAG00000001932) #16	ENSCJAG00000075120	HEATR3 (ENSCJAG00000001972) #17	CNEP1R1 (ENSCJAG00000001997) #18	ZNF423 (ENSCJAG00000011975) #19	C16orf78 (ENSCJAG00000012672) #20	CBLN1 (ENSCJAG00000012660) #21	ENSCJAG00000023015	N4BP1 (ENSCJAG00000012640) #22	SIAH1 (ENSCJAG00000053793) #23	ENSCJAG00000082008	LONP2 (ENSCJAG00000012577) #24	ABCC11 (ENSCJAG00000012514)	ENSCJAG00000084793	ENSCJAG00000073786	ENSCJAG00000079236	ENSCJAG00000069845	PHKB (ENSCJAG00000018324) #27	ENSCJAG00000084782	ITFG1 (ENSCJAG00000018388) #28	NETO2 (ENSCJAG00000007534) #29	DNAJA2 (ENSCJAG00000007552) #30	GPT2 (ENSCJAG00000007578) #31	C16orf87 (ENSCJAG00000083227) #32
Mas night monkey	MODERN SPECIES	726																N4BP1 (ENSANAG00000023220) #22	ENSANAG00000016994 #23	ENSANAG00000027187 #24
Tarsier	MODERN SPECIES	6082																N4BP1 (ENSTSYG00000025531) #22	SIAH1 (ENSTSYG00000028257) #23	LONP2 (ENSTSYG00000001400) #24	ABCC11 (ENSTSYG00000001398)	ABCC12 (ENSTSYG00000001389) #26	ENSTSYG00000027992
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.q #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Lemuriformes	ANCESTRAL SPECIES	69	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.q #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Mouse lemur	MODERN SPECIES	12	BEAN1 (ENSMICG00000037496)	CDH5 (ENSMICG00000010353)	CDH11 (ENSMICG00000012944)	CDH8 (ENSMICG00000009649)	ENSMICG00000038193	NKD1 (ENSMICG00000031027) #13	BRD7 (ENSMICG00000045004) #14	ADCY7 (ENSMICG00000011063) #15	TENT4B (ENSMICG00000027866) #16	ENSMICG00000031640	HEATR3 (ENSMICG00000012805) #17	CNEP1R1 (ENSMICG00000038531) #18	ZNF423 (ENSMICG00000005195) #19	C16orf78 (ENSMICG00000000865) #20	CBLN1 (ENSMICG00000032478) #21	N4BP1 (ENSMICG00000035077) #22	SIAH1 (ENSMICG00000042262) #23	LONP2 (ENSMICG00000014752) #24	ABCC11 (ENSMICG00000007811)	ABCC12 (ENSMICG00000007797) #26	ENSMICG00000026987	ENSMICG00000036396	PHKB (ENSMICG00000012314) #27	ITFG1 (ENSMICG00000012296) #28	NETO2 (ENSMICG00000029065) #29	DNAJA2 (ENSMICG00000017777) #30	ENSMICG00000043798	GPT2 (ENSMICG00000013187) #31	C16orf87 (ENSMICG00000005922) #32	MYLK3 (ENSMICG00000046381) #33	ORC6 (ENSMICG00000028393) #34
Lemuriformes_a	ANCESTRAL SPECIES	151	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.q #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Greater bamboo lemur	MODERN SPECIES	1276												CNEP1R1 (ENSPSMG00000021072) #18	ZNF423 (ENSPSMG00000021050) #19	C16orf78 (ENSPSMG00000021035) #20	CBLN1 (ENSPSMG00000021024) #21	N4BP1 (ENSPSMG00000020997) #22	ENSPSMG00000020954
Coquerels sifaka	MODERN SPECIES	609											TMEM47 (ENSPCOG00000019390)	ENSPCOG00000023082 #19	C16orf78 (ENSPCOG00000021897) #20	CBLN1 (ENSPCOG00000016497) #21	ENSPCOG00000014553	N4BP1 (ENSPCOG00000026157) #22	SIAH1 (ENSPCOG00000016801) #23	LONP2 (ENSPCOG00000027872) #24	ABCC11 (ENSPCOG00000012940)	ABCC12 (ENSPCOG00000021669) #26
Bushbaby	MODERN SPECIES	173	CHD9 (ENSOGAG00000002110)	TOX3 (ENSOGAG00000009531) #8	SALL1 (ENSOGAG00000027316) #9	CYLD (ENSOGAG00000014666) #10	NOD2 (ENSOGAG00000014655) #11	SNX20 (ENSOGAG00000014652) #12	NKD1 (ENSOGAG00000024948) #13	BRD7 (ENSOGAG00000011289) #14	ADCY7 (ENSOGAG00000011284) #15	TENT4B (ENSOGAG00000011282) #16	HEATR3 (ENSOGAG00000011658) #17	CNEP1R1 (ENSOGAG00000015665) #18	ZNF423 (ENSOGAG00000029813) #19	C16orf78 (ENSOGAG00000012618) #20	CBLN1 (ENSOGAG00000026093) #21	N4BP1 (ENSOGAG00000012341) #22	ENSOGAG00000027052 #23	LONP2 (ENSOGAG00000000674) #24	ENSOGAG00000028743	ABCC11 (ENSOGAG00000006391)	ABCC12 (ENSOGAG00000006382) #26	ENSOGAG00000029001	ENSOGAG00000026086	PHKB (ENSOGAG00000014190) #27	ITFG1 (ENSOGAG00000014184) #28	NETO2 (ENSOGAG00000004721) #29	DNAJA2 (ENSOGAG00000013624) #30	GPT2 (ENSOGAG00000014309) #31	C16orf87 (ENSOGAG00000000186) #32	MYLK3 (ENSOGAG00000000398) #33	ORC6 (ENSOGAG00000000688) #34
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Suina	ANCESTRAL SPECIES	2	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310	ENSGT00390000001014
Chacoan peccary	MODERN SPECIES	105							ENSCWAG00000002812 #14	ENSCWAG00000002798 #14	ADCY7 (ENSCWAG00000002780) #15	TENT4B (ENSCWAG00000002755) #16	HEATR3 (ENSCWAG00000002737) #17	CNEP1R1 (ENSCWAG00000002721) #18	ZNF423 (ENSCWAG00000002702) #19	C16orf78 (ENSCWAG00000002696) #20	CBLN1 (ENSCWAG00000002688) #21	N4BP1 (ENSCWAG00000002680) #22	SIAH1 (ENSCWAG00000002671) #23	LONP2 (ENSCWAG00000002606) #24
Pig	MODERN SPECIES	14	ENSSSCG00000058098	TOX3 (ENSSSCG00000002835) #8	SALL1 (ENSSSCG00000002836) #9	CYLD (ENSSSCG00000040286) #10	NOD2 (ENSSSCG00000038073) #11	SNX20 (ENSSSCG00000025741) #12	NKD1 (ENSSSCG00000039875) #13	BRD7 (ENSSSCG00000021644) #14	ADCY7 (ENSSSCG00000039408) #15	TENT4B (ENSSSCG00000062607) #16	HEATR3 (ENSSSCG00000040887) #17	CNEP1R1 (ENSSSCG00000036005) #18	ZNF423 (ENSSSCG00000002838) #19	C16orf78 (ENSSSCG00000002839) #20	CBLN1 (ENSSSCG00000040652) #21	N4BP1 (ENSSSCG00000002841) #22	SIAH1 (ENSSSCG00000037263) #23	LONP2 (ENSSSCG00000023391) #24	ABCC11 (ENSSSCG00000032298)	ABCC12 (ENSSSCG00000022813) #26	PHKB (ENSSSCG00000002844) #27	ITFG1 (ENSSSCG00000033527) #28	NETO2 (ENSSSCG00000026318) #29	DNAJA2 (ENSSSCG00000002846) #30	GPT2 (ENSSSCG00000002847) #31	C16orf87 (ENSSSCG00000022333) #32	MYLK3 (ENSSSCG00000036874) #33	ORC6 (ENSSSCG00000024443) #34	VPS35 (ENSSSCG00000026239) #35	SHCBP1 (ENSSSCG00000002849)	ENSSSCG00000002850
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00940000166964	ENSGT00960000190798	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00960000190798	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00390000012524.a.b	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00390000012524.a.b	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041.h.a #29	ENSGT00990000204193	ENSGT00940000156041.g #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00390000012524.a.b	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041.h.a #29	ENSGT00990000204193	ENSGT00940000156041.g #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370.i #34	ENSGT00390000007315 #35
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00390000012524.a.b	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B.bb #27	ENSGT00390000013367 #28	ENSGT00940000156041.h.a #29	ENSGT00990000204193	ENSGT00940000156041.g #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370.i #34	ENSGT00390000007315 #35
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00390000012524.a.b	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B.bb #27	ENSGT00390000013367 #28	ENSGT00940000156041.h.a #29	ENSGT00990000204193	ENSGT00940000156041.g #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370.i #34	ENSGT00390000007315 #35
Narwhal	MODERN SPECIES	296	TOX3 (ENSMMNG00015009598) #8	SALL1 (ENSMMNG00015009605) #9	CYLD (ENSMMNG00015009618) #10	NOD2 (ENSMMNG00015009637) #11	SNX20 (ENSMMNG00015009652) #12	NKD1 (ENSMMNG00015009664) #13	BRD7 (ENSMMNG00015009678) #14	ADCY7 (ENSMMNG00015009697) #15	TENT4B (ENSMMNG00015009736) #16	HEATR3 (ENSMMNG00015009780) #17	CNEP1R1 (ENSMMNG00015009819) #18	ZNF423 (ENSMMNG00015009834) #19	C16orf78 (ENSMMNG00015009847) #20	CBLN1 (ENSMMNG00015009855) #21	ENSMMNG00015009863	N4BP1 (ENSMMNG00015009871) #22	SIAH1 (ENSMMNG00015000049) #23	LONP2 (ENSMMNG00015000143) #24	ENSMMNG00015000198	ABCC12 (ENSMMNG00015000285) #26	ENSMMNG00015000546 #27	ITFG1 (ENSMMNG00015000673) #28	NETO2 (ENSMMNG00015000741) #29	DNAJA2 (ENSMMNG00015000782) #30	GPT2 (ENSMMNG00015000815) #31	C16orf87 (ENSMMNG00015000869) #32	MYLK3 (ENSMMNG00015000932) #33	ENSMMNG00015001005 #34	VPS35 (ENSMMNG00015001063) #35	SHCBP1 (ENSMMNG00015001117)	UQCRFS1 (ENSMMNG00015001165)
Beluga whale	MODERN SPECIES	3	TOX3 (ENSDLEG00000004483) #8	SALL1 (ENSDLEG00000004477) #9	CYLD (ENSDLEG00000004470) #10	NOD2 (ENSDLEG00000004464) #11	SNX20 (ENSDLEG00000004455) #12	NKD1 (ENSDLEG00000004447) #13	BRD7 (ENSDLEG00000004432) #14	ADCY7 (ENSDLEG00000004403) #15	TENT4B (ENSDLEG00000004389) #16	HEATR3 (ENSDLEG00000004380) #17	CNEP1R1 (ENSDLEG00000004375) #18	ZNF423 (ENSDLEG00000004357) #19	C16orf78 (ENSDLEG00000004349) #20	CBLN1 (ENSDLEG00000004341) #21	ENSDLEG00000004338	N4BP1 (ENSDLEG00000004331) #22	SIAH1 (ENSDLEG00000004325) #23	LONP2 (ENSDLEG00000004298) #24	ENSDLEG00000004257 #26	ENSDLEG00000004254	PHKB (ENSDLEG00000003990) #27	ITFG1 (ENSDLEG00000003922) #28	NETO2 (ENSDLEG00000003917) #29	ENSDLEG00000003914	DNAJA2 (ENSDLEG00000003905) #30	GPT2 (ENSDLEG00000003886) #31	CUNH16orf87 (ENSDLEG00000003869) #32	MYLK3 (ENSDLEG00000003839) #33	ENSDLEG00000003816 #34	VPS35 (ENSDLEG00000003791) #35	SHCBP1 (ENSDLEG00000003776)
Vaquita	MODERN SPECIES	10	TOX3 (ENSPSNG00000015650) #8	SALL1 (ENSPSNG00000015573) #9	CYLD (ENSPSNG00000015466) #10	NOD2 (ENSPSNG00000015318) #11	SNX20 (ENSPSNG00000015147) #12	NKD1 (ENSPSNG00000015073) #13	BRD7 (ENSPSNG00000014996) #14	ENSPSNG00000014944 #15	TENT4B (ENSPSNG00000014186) #16	HEATR3 (ENSPSNG00000014045) #17	CNEP1R1 (ENSPSNG00000013955) #18	ZNF423 (ENSPSNG00000013840) #19	C16orf78 (ENSPSNG00000013755) #20	CBLN1 (ENSPSNG00000013689) #21	ENSPSNG00000013659	N4BP1 (ENSPSNG00000013602) #22	SIAH1 (ENSPSNG00000013519) #23	LONP2 (ENSPSNG00000013371) #24	ENSPSNG00000013246 #26	ENSPSNG00000013216	PHKB (ENSPSNG00000013066) #27	ITFG1 (ENSPSNG00000021338) #28	NETO2 (ENSPSNG00000021319) #29	ENSPSNG00000021303	DNAJA2 (ENSPSNG00000021284) #30	GPT2 (ENSPSNG00000021261) #31	C16orf87 (ENSPSNG00000021234) #32	MYLK3 (ENSPSNG00000021168) #33	ENSPSNG00000021135 #34	VPS35 (ENSPSNG00000021085) #35	SHCBP1 (ENSPSNG00000021057)
Dolphin	MODERN SPECIES	6198																N4BP1 (ENSTTRG00000016111) #22
Sperm whale	MODERN SPECIES	8	CHD9NB (ENSPCTG00005011329)	TOX3 (ENSPCTG00005011262) #8	ENSPCTG00005011229	CYLD (ENSPCTG00005011098) #10	SNX20 (ENSPCTG00005010956) #12	NKD1 (ENSPCTG00005010867) #13	BRD7 (ENSPCTG00005010758) #14	ADCY7 (ENSPCTG00005010652) #15	TENT4B (ENSPCTG00005010555) #16	ENSPCTG00005010513	HEATR3 (ENSPCTG00005010371) #17	CNEP1R1 (ENSPCTG00005010290) #18	ZNF423 (ENSPCTG00005010161) #19	C17H16orf78 (ENSPCTG00005010092) #20	CBLN1 (ENSPCTG00005010053) #21	N4BP1 (ENSPCTG00005009990) #22	SIAH1 (ENSPCTG00005009946) #23	LONP2 (ENSPCTG00005009803) #24	ENSPCTG00005009733	ENSPCTG00005009613 #26	PHKB (ENSPCTG00005009489) #27	ITFG1 (ENSPCTG00005009263) #28	ENSPCTG00005009015 #29	ENSPCTG00005008968	DNAJA2 (ENSPCTG00005018810) #30	GPT2 (ENSPCTG00005018753) #31	C16orf87 (ENSPCTG00005018678) #32	ORC6 (ENSPCTG00005018581) #34	MYLK3 (ENSPCTG00005018229) #35	SHCBP1 (ENSPCTG00005018139)	ENSPCTG00005018116
Blue whale	MODERN SPECIES	10	NOD2 (ENSBMSG00010015156) #11	SNX20 (ENSBMSG00010015078) #12	NKD1 (ENSBMSG00010015016) #13	ENSBMSG00010014986	BRD7 (ENSBMSG00010014944) #14	ADCY7 (ENSBMSG00010014515) #15	TENT4B (ENSBMSG00010014342) #16	ENSBMSG00010014321	HEATR3 (ENSBMSG00010014266) #17	CNEP1R1 (ENSBMSG00010014215) #18	ENSBMSG00010014176	ZNF423 (ENSBMSG00010019661) #19	C16orf78 (ENSBMSG00010019643) #20	CBLN1 (ENSBMSG00010019622) #21	ENSBMSG00010019615	N4BP1 (ENSBMSG00010019590) #22	SIAH1 (ENSBMSG00010019562) #23	LONP2 (ENSBMSG00010019517) #24	ENSBMSG00010019474 #26	PHKB (ENSBMSG00010019329) #27	ITFG1 (ENSBMSG00010019268) #28	NETO2 (ENSBMSG00010019202) #29	ENSBMSG00010019175	DNAJA2 (ENSBMSG00010019149) #30	GPT2 (ENSBMSG00010019103) #31	C16orf87 (ENSBMSG00010019068) #32	MYLK3 (ENSBMSG00010018990) #33	ORC6 (ENSBMSG00010018899) #34	VPS35 (ENSBMSG00010018847) #35	ENSBMSG00010018825	SHCBP1 (ENSBMSG00010018800)
Pecora	ANCESTRAL SPECIES	4	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.a.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Yarkand deer	MODERN SPECIES	27	CHD9 (ENSCHYG00000005567)	ENSCHYG00000005452	SALL1 (ENSCHYG00000005364) #9	CYLD (ENSCHYG00000005179) #10	NOD2 (ENSCHYG00000005036) #11	SNX20 (ENSCHYG00000004988) #12	NKD1 (ENSCHYG00000004944) #13	BRD7 (ENSCHYG00000004908) #14	ADCY7 (ENSCHYG00000004827) #15	TENT4B (ENSCHYG00000004780) #16	HEATR3 (ENSCHYG00000004729) #17	CNEP1R1 (ENSCHYG00000004697) #18	ZNF423 (ENSCHYG00000004665) #19	C16orf78 (ENSCHYG00000004643) #20	CBLN1 (ENSCHYG00000004635) #21	N4BP1 (ENSCHYG00000004618) #22	ENSCHYG00000004605 #23	LONP2 (ENSCHYG00000004582) #24	ABCC11 (ENSCHYG00000004542)	ABCC12 (ENSCHYG00000004510) #26	ENSCHYG00000004492	ENSCHYG00000002555 #27	ITFG1 (ENSCHYG00000001906) #28	ENSCHYG00000001892	NETO2 (ENSCHYG00000001873) #29	DNAJA2 (ENSCHYG00000001848) #30	GPT2 (ENSCHYG00000001813) #31	ENSCHYG00000001787 #32	MYLK3 (ENSCHYG00000001728) #33	ORC6 (ENSCHYG00000001691) #34	VPS35 (ENSCHYG00000001622) #35
Percora_a	ANCESTRAL SPECIES	4	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.a.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Siberian musk deer	MODERN SPECIES	1191																N4BP1 (ENSMMSG00000008356) #22	ENSMMSG00000008331	ENSMMSG00000008303 #23	LONP2 (ENSMMSG00000008241) #24	ABCC11 (ENSMMSG00000007923)	ABCC12 (ENSMMSG00000007739) #26	PHKB (ENSMMSG00000007449) #27	ITFG1 (ENSMMSG00000007334) #28	NETO2 (ENSMMSG00000007241) #29	DNAJA2 (ENSMMSG00000007217) #30	GPT2 (ENSMMSG00000007182) #31	C16orf87 (ENSMMSG00000007167) #32	MYLK3 (ENSMMSG00000007045) #33	ENSMMSG00000006974 #34	VPS35 (ENSMMSG00000006901) #35	SHCBP1 (ENSMMSG00000006807)
Bovidae	ANCESTRAL SPECIES	4	ENSGT00910000148543	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.a.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000155525.j	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Caprinae	ANCESTRAL SPECIES	4	ENSGT00910000148543	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.a.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b.i #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Goat	MODERN SPECIES	9	SALL1 (ENSCHIG00000026074) #9	ENSCHIG00000011085	CYLD (ENSCHIG00000026390) #10	NOD2 (ENSCHIG00000024746) #11	SNX20 (ENSCHIG00000026020) #12	NKD1 (ENSCHIG00000022144) #13	BRD7 (ENSCHIG00000023787) #14	ADCY7 (ENSCHIG00000025184) #15	TENT4B (ENSCHIG00000021933) #16	HEATR3 (ENSCHIG00000016750) #17	CNEP1R1 (ENSCHIG00000021937) #18	ZNF423 (ENSCHIG00000027139) #19	C16orf78 (ENSCHIG00000026888) #20	CBLN1 (ENSCHIG00000016657) #21	ENSCHIG00000020063	N4BP1 (ENSCHIG00000019641) #22	ENSCHIG00000017834 #23	LONP2 (ENSCHIG00000027250) #24	ABCC11 (ENSCHIG00000001779)	ABCC12 (ENSCHIG00000022733) #26	PHKB (ENSCHIG00000015267) #27	ENSCHIG00000010050	ITFG1 (ENSCHIG00000020564) #28	NETO2 (ENSCHIG00000014739) #29	ENSCHIG00000000692	ENSCHIG00000023464 #30	GPT2 (ENSCHIG00000027095) #31	C16orf87 (ENSCHIG00000024479) #32	MYLK3 (ENSCHIG00000019555) #33	ORC6 (ENSCHIG00000022439) #34	VPS35 (ENSCHIG00000025912) #35
Rambouillet Sheep	MODERN SPECIES	5	CYLD (ENSOARG00020007008) #10	NOD2 (ENSOARG00020006729) #11	SNX20 (ENSOARG00020006621) #12	NKD1 (ENSOARG00020006504) #13	ENSOARG00020006477	BRD7 (ENSOARG00020006275) #14	ADCY7 (ENSOARG00020006198) #15	TENT4B (ENSOARG00020006032) #16	HEATR3 (ENSOARG00020005991) #17	CNEP1R1 (ENSOARG00020005909) #18	ENSOARG00020005883	ZNF423 (ENSOARG00020005823) #19	C16orf78 (ENSOARG00020005789) #20	CBLN1 (ENSOARG00020005764) #21	ENSOARG00020005755	N4BP1 (ENSOARG00020005726) #22	ENSOARG00020005714 #23	LONP2 (ENSOARG00020005643) #24	ABCC12 (ENSOARG00020005118) #26	ENSOARG00020005096	ENSOARG00020005082	ITFG1 (ENSOARG00020004914) #28	NETO2 (ENSOARG00020004813) #29	ENSOARG00020004784	DNAJA2 (ENSOARG00020004751) #30	GPT2 (ENSOARG00020004699) #31	C14H16orf87 (ENSOARG00020004624) #32	MYLK3 (ENSOARG00020004459) #33	ORC6 (ENSOARG00020004404) #34	VPS35 (ENSOARG00020004298) #35	SHCBP1 (ENSOARG00020004241)
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000158043 #8	ENSGT00960000189733	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.a.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000155525.j	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Bos	ANCESTRAL SPECIES	4	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00960000187150	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.a.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT01100000263480.a.a.a.a.b.b.a.a.a.a.a.b	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000155525.j	ENSGT00940000156041 #29	ENSGT00940000154688.b.l #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34
Bos_b	ANCESTRAL SPECIES		ENSGT00940000158043 #8	ENSGT00390000018141.i.a.b.b.b.a.b.b.a.b.b	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.a.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT01100000263480.a.a.a.a.b.b.a.a.a.a.a.b	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000155525.j	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b.l #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34
Hybrid Bos Indicus	MODERN SPECIES	9	ENSBIXG00005014430	SALL1 (ENSBIXG00005006737) #9	CYLD (ENSBIXG00005014346) #10	NOD2 (ENSBIXG00005014215) #11	SNX20 (ENSBIXG00005005704) #12	NKD1 (ENSBIXG00005005932) #13	BRD7 (ENSBIXG00005014141) #14	ADCY7 (ENSBIXG00005014084) #15	TENT4B (ENSBIXG00005007491) #16	HEATR3 (ENSBIXG00005013925) #17	ENSBIXG00005005400	CNEP1R1 (ENSBIXG00005001738) #18	ZNF423 (ENSBIXG00005005395) #19	C16orf78 (ENSBIXG00005013700) #20	CBLN1 (ENSBIXG00005001667) #21	N4BP1 (ENSBIXG00005013624) #22	ENSBIXG00005013587 #23	LONP2 (ENSBIXG00005013538) #24	ABCC11 (ENSBIXG00005013461)	ENSBIXG00005013363	ABCC12 (ENSBIXG00005007115) #26	ENSBIXG00005005390	ENSBIXG00005013270	PHKB (ENSBIXG00005001511) #27	ENSBIXG00005013037	ITFG1 (ENSBIXG00005013019) #28	NETO2 (ENSBIXG00005001469) #29	ENSBIXG00005012947	ENSBIXG00005001455	DNAJA2 (ENSBIXG00005012920) #30	ENSBIXG00005012897
Cow	MODERN SPECIES	9	SALL1 (ENSBTAG00000008544) #9	CYLD (ENSBTAG00000006291) #10	NOD2 (ENSBTAG00000020936) #11	SNX20 (ENSBTAG00000003961) #12	NKD1 (ENSBTAG00000012295) #13	BRD7 (ENSBTAG00000021575) #14	ADCY7 (ENSBTAG00000006208) #15	TENT4B (ENSBTAG00000007942) #16	HEATR3 (ENSBTAG00000016640) #17	CNEP1R1 (ENSBTAG00000033078) #18	ENSBTAG00000052469	ENSBTAG00000051062	ZNF423 (ENSBTAG00000017397) #19	C18H16orf78 (ENSBTAG00000008720) #20	CBLN1 (ENSBTAG00000015194) #21	N4BP1 (ENSBTAG00000019938) #22	SIAH1 (ENSBTAG00000010868) #23	LONP2 (ENSBTAG00000010867) #24	ABCC11 (ENSBTAG00000010858)	ABCC12 (ENSBTAG00000044191) #26	PHKB (ENSBTAG00000004806) #27	ITFG1 (ENSBTAG00000004805) #28	ENSBTAG00000053690	NETO2 (ENSBTAG00000014370) #29	ENSBTAG00000054464	DNAJA2 (ENSBTAG00000003757) #30	GPT2 (ENSBTAG00000002980) #31	C18H16orf87 (ENSBTAG00000003503) #32	MYLK3 (ENSBTAG00000014818) #33	ORC6 (ENSBTAG00000001872) #34	VPS35 (ENSBTAG00000002493) #35
Bos_a	ANCESTRAL SPECIES	22	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00390000003561.m.c.a	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00960000187150	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.a.a #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT01100000263480.a.a.a.a.b.b.a.a.a.a.a.b	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000155525.j	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b.l #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34
Domestic yak	MODERN SPECIES	12	NOD2 (ENSBGRG00000006201) #11	SNX20 (ENSBGRG00000006807) #12	NKD1 (ENSBGRG00000007093) #13	ENSBGRG00000007550	BRD7 (ENSBGRG00000007865) #14	ADCY7 (ENSBGRG00000008786) #15	TENT4B (ENSBGRG00000009967) #16	ENSBGRG00000010894	ENSBGRG00000010983	HEATR3 (ENSBGRG00000011232) #17	ENSBGRG00000011559	CNEP1R1 (ENSBGRG00000011705) #18	ZNF423 (ENSBGRG00000012116) #19	C16orf78 (ENSBGRG00000012467) #20	CBLN1 (ENSBGRG00000012677) #21	N4BP1 (ENSBGRG00000012870) #22	ENSBGRG00000013045 #23	LONP2 (ENSBGRG00000013373) #24	ABCC11 (ENSBGRG00000014263)	ENSBGRG00000014670	ABCC12 (ENSBGRG00000014865) #26	PHKB (ENSBGRG00000015830) #27	ITFG1 (ENSBGRG00000016573) #28	NETO2 (ENSBGRG00000017316) #29	DNAJA2 (ENSBGRG00000017976) #30	GPT2 (ENSBGRG00000018375) #31	C16orf87 (ENSBGRG00000018654) #32	MYLK3 (ENSBGRG00000019153) #33	ORC6 (ENSBGRG00000019858) #34	ENSBGRG00000020208 #35	ENSBGRG00000020551
Wild yak	MODERN SPECIES	2234																N4BP1 (ENSBMUG00000016350) #22	ENSBMUG00000016336 #23	LONP2 (ENSBMUG00000016315) #24	ABCC11 (ENSBMUG00000016214)	ABCC12 (ENSBMUG00000016025) #26	ENSBMUG00000015976 #27
American bison	MODERN SPECIES	3111												ZNF423 (ENSBBBG00000004327) #19	ENSBBBG00000017453	C16orf78 (ENSBBBG00000007267) #20	CBLN1 (ENSBBBG00000017429) #21	N4BP1 (ENSBBBG00000004311) #22	ENSBBBG00000017408 #23	LONP2 (ENSBBBG00000017392) #24	ABCC11 (ENSBBBG00000004282)	ABCC12 (ENSBBBG00000017067) #26	PHKB (ENSBBBG00000016907) #27	ITFG1 (ENSBBBG00000016792) #28	NETO2 (ENSBBBG00000008556) #29	ENSBBBG00000004136	DNAJA2 (ENSBBBG00000016724) #30	ENSBBBG00000000726	GPT2 (ENSBBBG00000000730) #31	C16orf87 (ENSBBBG00000016694) #32	MYLK3 (ENSBBBG00000016672) #33	ORC6 (ENSBBBG00000016634) #34	VPS35 (ENSBBBG00000004106) #35
Camelidae	ANCESTRAL SPECIES	9	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310	ENSGT00390000001014
Alpaca	MODERN SPECIES	3293																N4BP1 (ENSVPAG00000000597) #22
Arabian camel	MODERN SPECIES	35	ENSCDRG00005001171	TOX3 (ENSCDRG00005001153) #8	SALL1 (ENSCDRG00005001107) #9	CYLD (ENSCDRG00005001037) #10	NOD2 (ENSCDRG00005000930) #11	SNX20 (ENSCDRG00005000889) #12	NKD1 (ENSCDRG00005000863) #13	BRD7 (ENSCDRG00005000831) #14	ADCY7 (ENSCDRG00005000750) #15	TENT4B (ENSCDRG00005000655) #16	HEATR3 (ENSCDRG00005000603) #17	CNEP1R1 (ENSCDRG00005000581) #18	ZNF423 (ENSCDRG00005000552) #19	C16orf78 (ENSCDRG00005000529) #20	CBLN1 (ENSCDRG00005000510) #21	N4BP1 (ENSCDRG00005000490) #22	SIAH1 (ENSCDRG00005000466) #23	LONP2 (ENSCDRG00005000407) #24	ABCC11 (ENSCDRG00005000144)	ABCC12 (ENSCDRG00005022311) #26	PHKB (ENSCDRG00005022272) #27	ITFG1 (ENSCDRG00005022204) #28	NETO2 (ENSCDRG00005022162) #29	DNAJA2 (ENSCDRG00005022140) #30	GPT2 (ENSCDRG00005022050) #31	ENSCDRG00005022000 #32	MYLK3 (ENSCDRG00005021954) #33	ORC6 (ENSCDRG00005021936) #34	VPS35 (ENSCDRG00005021932) #35	SHCBP1 (ENSCDRG00005021912)	ENSCDRG00005021909
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000155938.i #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000155938.i #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00960000190798	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Canidae	ANCESTRAL SPECIES	14	ENSGT00940000168933	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00960000190798	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000161580	ENSGT00940000160840	ENSGT00950000182858.C	ENSGT00940000156275	ENSGT00940000158433	ENSGT00950000182995.e.a.a.b
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00940000155938.i #9	ENSGT00940000168933	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00960000190798	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000161580	ENSGT00940000160840	ENSGT00950000182858.C	ENSGT00940000156275	ENSGT00940000158433	ENSGT00950000182995.e.a.a.b	ENSGT00940000154576
Dog	MODERN SPECIES	11	NOD2 (ENSCAFG00845003875) #11	SNX20 (ENSCAFG00845003924) #12	NKD1 (ENSCAFG00845003953) #13	BRD7 (ENSCAFG00845003994) #14	ADCY7 (ENSCAFG00845004089) #15	TENT4B (ENSCAFG00845004208) #16	HEATR3 (ENSCAFG00845004241) #17	ENSCAFG00845004273	CNEP1R1 (ENSCAFG00845004308) #18	ENSCAFG00845004320	ENSCAFG00845004326	ZNF423 (ENSCAFG00845004378) #19	C2H16orf78 (ENSCAFG00845004423) #20	CBLN1 (ENSCAFG00845004446) #21	ENSCAFG00845004454	N4BP1 (ENSCAFG00845004469) #22	SIAH1 (ENSCAFG00845004556) #23	LONP2 (ENSCAFG00845004588) #24	ABCC11 (ENSCAFG00845004630)	ABCC12 (ENSCAFG00845004726) #26	PHKB (ENSCAFG00845004803) #27	ITFG1 (ENSCAFG00845004881) #28	NETO2 (ENSCAFG00845004942) #29	ENSCAFG00845004970 #30	ENSCAFG00845004991	PHC2 (ENSCAFG00845005005)	A3GALT2 (ENSCAFG00845005027)	ZNF362 (ENSCAFG00845005042)	TRIM62 (ENSCAFG00845005051)	AZIN2 (ENSCAFG00845005076)	AK2 (ENSCAFG00845005127)
Dingo	MODERN SPECIES	41	SALL1 (ENSCAFG00020002842) #9	ENSCAFG00020002827	CYLD (ENSCAFG00020001785) #10	NOD2 (ENSCAFG00020001497) #11	SNX20 (ENSCAFG00020001482) #12	NKD1 (ENSCAFG00020001437) #13	BRD7 (ENSCAFG00020001425) #14	ADCY7 (ENSCAFG00020001134) #15	TENT4B (ENSCAFG00020000987) #16	ENSCAFG00020000975	HEATR3 (ENSCAFG00020000624) #17	CNEP1R1 (ENSCAFG00020000556) #18	ZNF423 (ENSCAFG00020000541) #19	C16orf78 (ENSCAFG00020000518) #20	CBLN1 (ENSCAFG00020000480) #21	N4BP1 (ENSCAFG00020000467) #22	SIAH1 (ENSCAFG00020000454) #23	LONP2 (ENSCAFG00020000441) #24	ABCC11 (ENSCAFG00020000152)	ABCC12 (ENSCAFG00020025500) #26	ENSCAFG00020025471 #27	ENSCAFG00020025463 #27	ITFG1 (ENSCAFG00020025448) #28	NETO2 (ENSCAFG00020025433) #29	ENSCAFG00020025431 #30	ENSCAFG00020025427 #30	ZSCAN20 (ENSCAFG00020025424)	PHC2 (ENSCAFG00020025412)	A3GALT2 (ENSCAFG00020025408)	ZNF362 (ENSCAFG00020025405)	ENSCAFG00020025403
Red fox	MODERN SPECIES	87	ENSVVUG00000019369	ENSVVUG00000019367	CYLD (ENSVVUG00000019356) #10	NOD2 (ENSVVUG00000019346) #11	SNX20 (ENSVVUG00000019339) #12	NKD1 (ENSVVUG00000019337) #13	BRD7 (ENSVVUG00000019113) #14	ADCY7 (ENSVVUG00000018266) #15	TENT4B (ENSVVUG00000018169) #16	HEATR3 (ENSVVUG00000018143) #17	CNEP1R1 (ENSVVUG00000018121) #18	ENSVVUG00000018112	ZNF423 (ENSVVUG00000018080) #19	ENSVVUG00000018065 #20	CBLN1 (ENSVVUG00000018057) #21	N4BP1 (ENSVVUG00000018051) #22
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00940000158043 #8	ENSGT00940000155938.i #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310	ENSGT00390000001014.d
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00940000158043 #8	ENSGT00940000155938.i #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Ferret	MODERN SPECIES	174	SALL1 (ENSMPUG00000003265) #9	ENSMPUG00000003260	CYLD (ENSMPUG00000003199) #10	NOD2 (ENSMPUG00000003188) #11	SNX20 (ENSMPUG00000003184) #12	NKD1 (ENSMPUG00000003177) #13	BRD7 (ENSMPUG00000003164) #14	ADCY7 (ENSMPUG00000003154) #15	TENT4B (ENSMPUG00000003121) #16	HEATR3 (ENSMPUG00000003112) #17	CNEP1R1 (ENSMPUG00000003109) #18	ENSMPUG00000003081	ZNF423 (ENSMPUG00000003075) #19	C16orf78 (ENSMPUG00000003067) #20	CBLN1 (ENSMPUG00000003041) #21	N4BP1 (ENSMPUG00000003034) #22	SIAH1 (ENSMPUG00000003029) #23	LONP2 (ENSMPUG00000003022) #24	ABCC11 (ENSMPUG00000003011)	ABCC12 (ENSMPUG00000003000) #26	PHKB (ENSMPUG00000002987) #27	ITFG1 (ENSMPUG00000002973) #28	NETO2 (ENSMPUG00000002918) #29	DNAJA2 (ENSMPUG00000002844) #30	GPT2 (ENSMPUG00000002837) #31	C16orf87 (ENSMPUG00000002833) #32	ENSMPUG00000002805	MYLK3 (ENSMPUG00000002736) #33	ORC6 (ENSMPUG00000002704) #34	VPS35 (ENSMPUG00000002621) #35	SHCBP1 (ENSMPUG00000002614)
American mink	MODERN SPECIES	2	CHD9NB (ENSNVIG00000018148)	TOX3 (ENSNVIG00000018161) #8	SALL1 (ENSNVIG00000018193) #9	CYLD (ENSNVIG00000018201) #10	NOD2 (ENSNVIG00000018277) #11	SNX20 (ENSNVIG00000018295) #12	NKD1 (ENSNVIG00000018300) #13	BRD7 (ENSNVIG00000018322) #14	ADCY7 (ENSNVIG00000018370) #15	TENT4B (ENSNVIG00000018447) #16	HEATR3 (ENSNVIG00000018476) #17	CNEP1R1 (ENSNVIG00000018482) #18	ZNF423 (ENSNVIG00000018526) #19	ENSNVIG00000018548 #20	CBLN1 (ENSNVIG00000018559) #21	N4BP1 (ENSNVIG00000018575) #22	SIAH1 (ENSNVIG00000018590) #23	LONP2 (ENSNVIG00000018597) #24	ABCC11 (ENSNVIG00000018635)	ABCC12 (ENSNVIG00000018684) #26	KPBB (ENSNVIG00000018749) #27	ITFG1 (ENSNVIG00000018931) #28	NETO2 (ENSNVIG00000018988) #29	DNAJA2 (ENSNVIG00000019018) #30	GPT2 (ENSNVIG00000019028) #31	ENSNVIG00000019048	C16orf87 (ENSNVIG00000019087) #32	ENSNVIG00000019106	MYLK3 (ENSNVIG00000019118) #33	ORC6 (ENSNVIG00000019167) #34	VPS35 (ENSNVIG00000019198) #35
Ursidae	ANCESTRAL SPECIES	8	ENSGT00940000158043 #8	ENSGT00940000155938.i #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.e #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310	ENSGT00390000001014.d
Ursus	ANCESTRAL SPECIES	26	ENSGT00940000158043 #8	ENSGT00940000155938.i #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529.g #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.e #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310	ENSGT00390000001014.d
Polar bear	MODERN SPECIES	246	TOX3 (ENSUMAG00000005349) #8	ENSUMAG00000005357 #9	CYLD (ENSUMAG00000005408) #10	NOD2 (ENSUMAG00000005890) #11	ENSUMAG00000005926 #12	NKD1 (ENSUMAG00000005931) #13	BRD7 (ENSUMAG00000005986) #14	ADCY7 (ENSUMAG00000006160) #15	TENT4B (ENSUMAG00000006309) #16	HEATR3 (ENSUMAG00000006385) #17	CNEP1R1 (ENSUMAG00000006630) #18	ENSUMAG00000006646	ENSUMAG00000006664 #19	ENSUMAG00000006675 #20	CBLN1 (ENSUMAG00000006680) #21	N4BP1 (ENSUMAG00000006688) #22	ENSUMAG00000006693 #23	LONP2 (ENSUMAG00000006716) #24	ABCC11 (ENSUMAG00000007046)	ABCC12 (ENSUMAG00000007107) #26	PHKB (ENSUMAG00000007207) #27	ITFG1 (ENSUMAG00000007275) #28	NETO2 (ENSUMAG00000007445) #29	DNAJA2 (ENSUMAG00000007456) #30	GPT2 (ENSUMAG00000007464) #31	C16orf87 (ENSUMAG00000007482) #32	MYLK3 (ENSUMAG00000007489) #33	ORC6 (ENSUMAG00000007497) #34	VPS35 (ENSUMAG00000007502) #35	SHCBP1 (ENSUMAG00000007514)	UQCRFS1 (ENSUMAG00000007517)
American black bear	MODERN SPECIES	3390																N4BP1 (ENSUAMG00000027463) #22
Giant Panda	MODERN SPECIES	3	ENSAMEG00000028098	SALL1 (ENSAMEG00000025292) #9	CYLD (ENSAMEG00000006757) #10	NOD2 (ENSAMEG00000006741) #11	SNX20 (ENSAMEG00000024024) #12	ENSAMEG00000006721 #13	BRD7 (ENSAMEG00000006689) #14	ADCY7 (ENSAMEG00000006564) #15	TENT4B (ENSAMEG00000006535) #16	HEATR3 (ENSAMEG00000006493) #17	CNEP1R1 (ENSAMEG00000006491) #18	ENSAMEG00000006486	ZNF423 (ENSAMEG00000006481) #19	C16orf78 (ENSAMEG00000006474) #20	CBLN1 (ENSAMEG00000006468) #21	N4BP1 (ENSAMEG00000010288) #22	ENSAMEG00000010284 #23	LONP2 (ENSAMEG00000010282) #24	ABCC11 (ENSAMEG00000004329)	ABCC12 (ENSAMEG00000006218) #26	ENSAMEG00000026895 #27	ENSAMEG00000015093 #27	ITFG1 (ENSAMEG00000004849) #28	NETO2 (ENSAMEG00000004857) #29	DNAJA2 (ENSAMEG00000004874) #30	GPT2 (ENSAMEG00000004904) #31	C16orf87 (ENSAMEG00000000887) #32	MYLK3 (ENSAMEG00000000866) #33	ORC6 (ENSAMEG00000018347) #34	ENSAMEG00000018344 #35	ENSAMEG00000018332
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000155938.i #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00960000190798	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.c #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000158043 #8	ENSGT00940000155938.j #9	ENSGT00940000155938.i #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.c #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Tiger	MODERN SPECIES	547	TOX3 (ENSPTIG00000012938) #8	ENSPTIG00000013539 #9	ENSPTIG00000002799 #9	CYLD (ENSPTIG00000014633) #10	NOD2 (ENSPTIG00000007371) #11	SNX20 (ENSPTIG00000009177) #12	NKD1 (ENSPTIG00000010677) #13	BRD7 (ENSPTIG00000011411) #14	ADCY7 (ENSPTIG00000014532) #15	ENSPTIG00000020374 #16	HEATR3 (ENSPTIG00000020656) #17	CNEP1R1 (ENSPTIG00000005471) #18	ZNF423 (ENSPTIG00000008348) #19	C16orf78 (ENSPTIG00000012056) #20	CBLN1 (ENSPTIG00000012479) #21	N4BP1 (ENSPTIG00000013078) #22	SIAH1 (ENSPTIG00000013734) #23	LONP2 (ENSPTIG00000013959) #24	ABCC11 (ENSPTIG00000016229)	ABCC12 (ENSPTIG00000019872) #26	PHKB (ENSPTIG00000021444) #27	ITFG1 (ENSPTIG00000007464) #28	NETO2 (ENSPTIG00000009224) #29	DNAJA2 (ENSPTIG00000011350) #30	GPT2 (ENSPTIG00000011669) #31	C16orf87 (ENSPTIG00000012961) #32	ENSPTIG00000013190 #33	ORC6 (ENSPTIG00000013837) #34	VPS35 (ENSPTIG00000014402) #35	SHCBP1 (ENSPTIG00000015014)	UQCRFS1 (ENSPTIG00000016425)
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00390000008767.b.c	ENSGT00940000158043 #8	ENSGT00940000155938.i #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f.c #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000204193	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
leopard	MODERN SPECIES	28	TOX3 (ENSPPRG00000022987) #8	ENSPPRG00000023231	SALL1 (ENSPPRG00000023283) #9	CYLD (ENSPPRG00000023533) #10	NOD2 (ENSPPRG00000024296) #11	SNX20 (ENSPPRG00000024487) #12	NKD1 (ENSPPRG00000024626) #13	BRD7 (ENSPPRG00000024677) #14	ADCY7 (ENSPPRG00000024790) #15	TENT4B (ENSPPRG00000024986) #16	HEATR3 (ENSPPRG00000025034) #17	CNEP1R1 (ENSPPRG00000021139) #18	ZNF423 (ENSPPRG00000019601) #19	C16orf78 (ENSPPRG00000016709) #20	CBLN1 (ENSPPRG00000016053) #21	N4BP1 (ENSPPRG00000014683) #22	ENSPPRG00000014448 #23	LONP2 (ENSPPRG00000013784) #24	ABCC11 (ENSPPRG00000013105)	ABCC12 (ENSPPRG00000011869) #26	PHKB (ENSPPRG00000010511) #27	ITFG1 (ENSPPRG00000008702) #28	NETO2 (ENSPPRG00000008404) #29	DNAJA2 (ENSPPRG00000008142) #30	GPT2 (ENSPPRG00000008061) #31	ENSPPRG00000007490	C16orf87 (ENSPPRG00000007067) #32	ENSPPRG00000006605 #33	ORC6 (ENSPPRG00000006469) #34	VPS35 (ENSPPRG00000006061) #35	SHCBP1 (ENSPPRG00000005919)
lion	MODERN SPECIES	15	ENSPLOG00000006237	TOX3 (ENSPLOG00000006207) #8	SALL1 (ENSPLOG00000006158) #9	CYLD (ENSPLOG00000005966) #10	NOD2 (ENSPLOG00000005838) #11	SNX20 (ENSPLOG00000005801) #12	NKD1 (ENSPLOG00000005679) #13	BRD7 (ENSPLOG00000005652) #14	ADCY7 (ENSPLOG00000005432) #15	TENT4B (ENSPLOG00000015102) #16	HEATR3 (ENSPLOG00000015035) #17	CNEP1R1 (ENSPLOG00000014960) #18	ZNF423 (ENSPLOG00000014807) #19	C16orf78 (ENSPLOG00000014751) #20	CBLN1 (ENSPLOG00000014707) #21	N4BP1 (ENSPLOG00000014675) #22	ENSPLOG00000014631 #23	LONP2 (ENSPLOG00000014544) #24	ABCC11 (ENSPLOG00000013941)	ABCC12 (ENSPLOG00000013608) #26	PHKB (ENSPLOG00000013220) #27	ITFG1 (ENSPLOG00000012963) #28	NETO2 (ENSPLOG00000012794) #29	ENSPLOG00000012756	DNAJA2 (ENSPLOG00000012673) #30	GPT2 (ENSPLOG00000012599) #31	ENSPLOG00000012572	C16orf87 (ENSPLOG00000012519) #32	MYLK3 (ENSPLOG00000012295) #33	ORC6 (ENSPLOG00000012223) #34	VPS35 (ENSPLOG00000012152) #35
Cat	MODERN SPECIES	246	CYLD (ENSFCAG00000008506) #10	NOD2 (ENSFCAG00000008505) #11	SNX20 (ENSFCAG00000008504) #12	NKD1 (ENSFCAG00000045078) #13	BRD7 (ENSFCAG00000009072) #14	ADCY7 (ENSFCAG00000029424) #15	ENSFCAG00000043056	TENT4B (ENSFCAG00000018796) #16	ENSFCAG00000052869	HEATR3 (ENSFCAG00000007212) #17	CNEP1R1 (ENSFCAG00000023936) #18	ENSFCAG00000053653	ZNF423 (ENSFCAG00000012158) #19	C16orf78 (ENSFCAG00000042254) #20	CBLN1 (ENSFCAG00000028536) #21	N4BP1 (ENSFCAG00000025750) #22	ENSFCAG00000011336 #23	LONP2 (ENSFCAG00000005281) #24	ABCC11 (ENSFCAG00000005280)	ABCC12 (ENSFCAG00000005279) #26	ENSFCAG00000052800	PHKB (ENSFCAG00000008580) #27	ITFG1 (ENSFCAG00000008579) #28	NETO2 (ENSFCAG00000044763) #29	ENSFCAG00000052656	DNAJA2 (ENSFCAG00000026439) #30	GPT2 (ENSFCAG00000001642) #31	ENSFCAG00000038831	ENSFCAG00000042208 #32	MYLK3 (ENSFCAG00000001388) #33	ORC6 (ENSFCAG00000024275) #34
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a.d #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a.d #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Greater horseshoe bat	MODERN SPECIES	6	TOX3 (ENSRFEG00010016859) #8	SALL1 (ENSRFEG00010016793) #9	CYLD (ENSRFEG00010016753) #10	NOD2 (ENSRFEG00010016709) #11	SNX20 (ENSRFEG00010016632) #12	NKD1 (ENSRFEG00010016587) #13	BRD7 (ENSRFEG00010016521) #14	ADCY7 (ENSRFEG00010016429) #15	TENT4B (ENSRFEG00010016149) #16	HEATR3 (ENSRFEG00010016102) #17	CNEP1R1 (ENSRFEG00010016028) #18	ZNF423 (ENSRFEG00010015923) #19	C16orf78 (ENSRFEG00010015887) #20	CBLN1 (ENSRFEG00010015814) #21	ENSRFEG00010015754	N4BP1 (ENSRFEG00010015699) #22	SIAH1 (ENSRFEG00010015675) #23	LONP2 (ENSRFEG00010015576) #24	ABCC11 (ENSRFEG00010015462)	ABCC12 (ENSRFEG00010015021) #26	PHKB (ENSRFEG00010014738) #27	ITFG1 (ENSRFEG00010014334) #28	NETO2 (ENSRFEG00010014246) #29	ENSRFEG00010014197	DNAJA2 (ENSRFEG00010014129) #30	GPT2 (ENSRFEG00010014039) #31	C16orf87 (ENSRFEG00010013924) #32	MYLK3 (ENSRFEG00010013868) #33	ORC6 (ENSRFEG00010013754) #34	VPS35 (ENSRFEG00010013687) #35	SHCBP1 (ENSRFEG00010013445)
Microbat	MODERN SPECIES	503																ENSMLUG00000010359 #22
Megabat	MODERN SPECIES	7827																N4BP1 (ENSPVAG00000003838) #22
Equus	DUPLICATION
Equus	ANCESTRAL SPECIES																	ENSGT00940000158682.k #22
Horse	MODERN SPECIES	200																ENSECAG00000060068 #22
Equus	ANCESTRAL SPECIES	20	ENSGT00980000198839	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682.l #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Donkey	MODERN SPECIES	20	CHD9NB (ENSEASG00005026958)	TOX3 (ENSEASG00005014606) #8	SALL1 (ENSEASG00005014602) #9	CYLD (ENSEASG00005014600) #10	NOD2 (ENSEASG00005014576) #11	SNX20 (ENSEASG00005025406) #12	NKD1 (ENSEASG00005014569) #13	BRD7 (ENSEASG00005014566) #14	ADCY7 (ENSEASG00005014561) #15	TENT4B (ENSEASG00005014551) #16	HEATR3 (ENSEASG00005014548) #17	CNEP1R1 (ENSEASG00005014546) #18	ZNF423 (ENSEASG00005014542) #19	C16orf78 (ENSEASG00005014539) #20	CBLN1 (ENSEASG00005029359) #21	N4BP1 (ENSEASG00005014535) #22	ENSEASG00005032316 #23	LONP2 (ENSEASG00005014532) #24	ABCC11 (ENSEASG00005014518)	ABCC12 (ENSEASG00005014498) #26	PHKB (ENSEASG00005012644) #27	ENSEASG00005027031	ENSEASG00005023690	ENSEASG00005034281	ITFG1 (ENSEASG00005022771) #28	NETO2 (ENSEASG00005022776) #29	ENSEASG00005026511	DNAJA2 (ENSEASG00005022778) #30	GPT2 (ENSEASG00005022782) #31	ENSEASG00005038267	C16orf87 (ENSEASG00005029473) #32
Horse	MODERN SPECIES	22	ENSECAG00000029200 #8	TOX3 (ENSECAG00000011429) #8	SALL1 (ENSECAG00000011334) #9	CYLD (ENSECAG00000007240) #10	NOD2 (ENSECAG00000017005) #11	SNX20 (ENSECAG00000016834) #12	NKD1 (ENSECAG00000015958) #13	ENSECAG00000053051	BRD7 (ENSECAG00000013213) #14	ADCY7 (ENSECAG00000007149) #15	TENT4B (ENSECAG00000040529) #16	HEATR3 (ENSECAG00000000361) #17	ZNF423 (ENSECAG00000000244) #19	C3H16orf78 (ENSECAG00000000159) #20	CBLN1 (ENSECAG00000000034) #21	N4BP1 (ENSECAG00000024238) #22	SIAH1 (ENSECAG00000044655) #23	LONP2 (ENSECAG00000022436) #24	ABCC11 (ENSECAG00000021168)	ABCC12 (ENSECAG00000019541) #26	ENSECAG00000053363	PHKB (ENSECAG00000018240) #27	ITFG1 (ENSECAG00000013539) #28	NETO2 (ENSECAG00000009754) #29	DNAJA2 (ENSECAG00000009636) #30	GPT2 (ENSECAG00000009485) #31	ENSECAG00000001016	C3H16orf87 (ENSECAG00000009182) #32	RAP1A (ENSECAG00000006203)	MYLK3 (ENSECAG00000008775) #33	ORC6 (ENSECAG00000007182) #34
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000158682 #22
Hedgehog	MODERN SPECIES	660																N4BP1 (ENSEEUG00000008071) #22
Common shrew	MODERN SPECIES	311																N4BP1 (ENSSARG00000009865) #22
Atlantogenata	ANCESTRAL SPECIES	24	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000158682 #22
Sloth	MODERN SPECIES	9316																N4BP1 (ENSCHOG00000010107) #22
Armadillo	MODERN SPECIES	2142															ENSDNOG00000048181	N4BP1 (ENSDNOG00000043012) #22
Afrotheria	ANCESTRAL SPECIES	44	ENSGT00950000183202.a.b	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00390000005105	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310
Tenrec	MODERN SPECIES	618															ENSETEG00000013846	N4BP1 (ENSETEG00000013845) #22
Afrotheria_a	ANCESTRAL SPECIES	43	ENSGT00950000183202.a.b	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837.f #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000161310	ENSGT00390000001014
Elephant	MODERN SPECIES	393									ENSLAFG00000029037 #14	ENSLAFG00000006069 #16	HEATR3 (ENSLAFG00000016006) #17	CNEP1R1 (ENSLAFG00000012573) #18	ZNF423 (ENSLAFG00000018386) #19	ENSLAFG00000029190	CBLN1 (ENSLAFG00000026685) #21	N4BP1 (ENSLAFG00000017688) #22	SIAH1 (ENSLAFG00000017685) #23	LONP2 (ENSLAFG00000014081) #24	ABCC11 (ENSLAFG00000000414)	ABCC12 (ENSLAFG00000014750) #26	PHKB (ENSLAFG00000006480) #27	ITFG1 (ENSLAFG00000006897) #28	NETO2 (ENSLAFG00000007257) #29	DNAJA2 (ENSLAFG00000013396) #30	GPT2 (ENSLAFG00000016529) #31	C16orf87 (ENSLAFG00000009006) #32	MYLK3 (ENSLAFG00000001709) #33	ORC6 (ENSLAFG00000001707) #34	VPS35 (ENSLAFG00000001705) #35	SHCBP1 (ENSLAFG00000030123)	ENSLAFG00000029634
Hyrax	MODERN SPECIES	452																N4BP1 (ENSPCAG00000003813) #22
Marsupialia	ANCESTRAL SPECIES	18	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Opossum	DUPLICATION
Opossum	MODERN SPECIES		SALL1 (ENSMODG00000013114) #9	CYLD (ENSMODG00000013111) #10	NOD2 (ENSMODG00000013087) #11	SNX20 (ENSMODG00000013071) #12	NKD1 (ENSMODG00000013068) #13	ENSMODG00000013057 #14	ADCY7 (ENSMODG00000013047) #15	TENT4B (ENSMODG00000013026) #16	HEATR3 (ENSMODG00000013019) #17	CNEP1R1 (ENSMODG00000048858) #18	ENSMODG00000028787	ZNF423 (ENSMODG00000012988) #19	ENSMODG00000044145	CBLN1 (ENSMODG00000012983) #21	ENSMODG00000037529	ENSMODG00000012970 #22	SIAH1 (ENSMODG00000012963) #23	LONP2 (ENSMODG00000012957) #24	ABCC11 (ENSMODG00000029131)	ABCC12 (ENSMODG00000012914) #26	ENSMODG00000043051	PHKB (ENSMODG00000012900) #27	NETO2 (ENSMODG00000012864) #29	ITFG1 (ENSMODG00000012883) #28	DNAJA2 (ENSMODG00000012845) #30	GPT2 (ENSMODG00000012837) #31	C16orf87 (ENSMODG00000012820) #32	MYLK3 (ENSMODG00000012813) #33	ORC6 (ENSMODG00000012795) #34	VPS35 (ENSMODG00000012784) #35	ENSMODG00000042100
Opossum	MODERN SPECIES	5	UMOD (ENSMODG00000006730)	ENSMODG00000006696	GPR139 (ENSMODG00000006637)	GPRC5B (ENSMODG00000006628)	ENSMODG00000025493	ENSMODG00000006486	ENSMODG00000045967	VPS35L (ENSMODG00000006477)	CCP110 (ENSMODG00000006278)	GDE1 (ENSMODG00000006250)	TMC5 (ENSMODG00000006227)	TMC7 (ENSMODG00000006207)	COQ7 (ENSMODG00000006166)	ITPRIPL2 (ENSMODG00000025107)	SYT17 (ENSMODG00000006147)	ENSMODG00000051307 #22	ENSMODG00000040296	SMG1 (ENSMODG00000006102)	ARL6IP1 (ENSMODG00000005944)	RPS15A (ENSMODG00000005920)	XYLT1 (ENSMODG00000005904)	ENSMODG00000025119	ENSMODG00000044938	ENSMODG00000050357	ABCC6 (ENSMODG00000005815)	ECPAS (ENSMODG00000005682)	DNAJC25 (ENSMODG00000005635)	GNG10 (ENSMODG00000005623)	SHOC1 (ENSMODG00000005617)	UGCG (ENSMODG00000005539)	SUSD1 (ENSMODG00000005525)
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00390000014556 #20	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Diprotodontia	ANCESTRAL SPECIES	4	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00950000186190	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Diprotodontia_a	ANCESTRAL SPECIES	5	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00940000160934 #11	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00950000186190	ENSGT00940000153430.a.a.e	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000162968	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
koala	MODERN SPECIES	19	ENSPCIG00000032216	CYLD (ENSPCIG00000017853) #10	NOD2 (ENSPCIG00000017861) #11	SNX20 (ENSPCIG00000017863) #12	NKD1 (ENSPCIG00000017864) #13	BRD7 (ENSPCIG00000017871) #14	ADCY7 (ENSPCIG00000016804) #15	TENT4B (ENSPCIG00000018132) #16	HEATR3 (ENSPCIG00000012841) #17	CNEP1R1 (ENSPCIG00000003801) #18	ENSPCIG00000002963	ZNF423 (ENSPCIG00000021085) #19	ENSPCIG00000021089	ENSPCIG00000033644	CBLN1 (ENSPCIG00000031036) #21	N4BP1 (ENSPCIG00000021093) #22	SIAH1 (ENSPCIG00000021095) #23	LONP2 (ENSPCIG00000021096) #24	ABCC11 (ENSPCIG00000024830)	ENSPCIG00000033816 #26	PHKB (ENSPCIG00000021099) #27	ITFG1 (ENSPCIG00000018576) #28	NETO2 (ENSPCIG00000016201) #29	DNAJA2 (ENSPCIG00000018580) #30	GPT2 (ENSPCIG00000018581) #31	C16orf87 (ENSPCIG00000018582) #32	MYLK3 (ENSPCIG00000018586) #33	ORC6 (ENSPCIG00000018588) #34	VPS35 (ENSPCIG00000018597) #35	ENSPCIG00000018612	SHCBP1 (ENSPCIG00000015536)
Common wonbat	MODERN SPECIES	1024	TM9SF4 (ENSVURG00010013886)	PLAGL2 (ENSVURG00010013877)	POFUT1 (ENSVURG00010013868)	KIF3B (ENSVURG00010013862)	ASXL1 (ENSVURG00010013852)	NOL4L (ENSVURG00010013845)	COMMD7 (ENSVURG00010013836)	DNMT3B (ENSVURG00010013818)	MAPRE1 (ENSVURG00010013812)	BPIFB3 (ENSVURG00010013792)	BPIFB4 (ENSVURG00010013784)	ENSVURG00010013774	ENSVURG00010013743	ENSVURG00010013733	CBLN1 (ENSVURG00010013727) #21	N4BP1 (ENSVURG00010013716) #22	SIAH1 (ENSVURG00010013707) #23	LONP2 (ENSVURG00010013694) #24	ABCC11 (ENSVURG00010013674)	ENSVURG00010013664 #26	PHKB (ENSVURG00010013619) #27	ITFG1 (ENSVURG00010012993) #28	NETO2 (ENSVURG00010012945) #29	DNAJA2 (ENSVURG00010012918) #30	GPT2 (ENSVURG00010012907) #31	ENSVURG00010012900	C16orf87 (ENSVURG00010012890) #32	ORC6 (ENSVURG00010012881) #34	VPS35 (ENSVURG00010012859) #35	ENSVURG00010012592	SHCBP1 (ENSVURG00010012550)
Wallaby	MODERN SPECIES	1232																ENSMEUG00000006533 #22
Tasmanian devil	MODERN SPECIES	1	TOX3 (ENSSHAG00000022477) #8	SALL1 (ENSSHAG00000009477) #9	CYLD (ENSSHAG00000003079) #10	NOD2 (ENSSHAG00000029900) #11	SNX20 (ENSSHAG00000018921) #12	NKD1 (ENSSHAG00000028041) #13	BRD7 (ENSSHAG00000018810) #14	ADCY7 (ENSSHAG00000018774) #15	TENT4B (ENSSHAG00000018746) #16	HEATR3 (ENSSHAG00000014261) #17	CNEP1R1 (ENSSHAG00000018694) #18	ENSSHAG00000018669	ZNF423 (ENSSHAG00000018342) #19	ENSSHAG00000018055 #20	CBLN1 (ENSSHAG00000026579) #21	N4BP1 (ENSSHAG00000016460) #22	ENSSHAG00000020968	SIAH1 (ENSSHAG00000015954) #23	LONP2 (ENSSHAG00000015566) #24	ABCC11 (ENSSHAG00000015355)	ABCC12 (ENSSHAG00000015026) #26	ENSSHAG00000022909	PHKB (ENSSHAG00000012047) #27	ITFG1 (ENSSHAG00000010089) #28	NETO2 (ENSSHAG00000009671) #29	DNAJA2 (ENSSHAG00000008438) #30	GPT2 (ENSSHAG00000007548) #31	C16orf87 (ENSSHAG00000029891) #32	MYLK3 (ENSSHAG00000004502) #33	ORC6 (ENSSHAG00000004207) #34	ENSSHAG00000003156 #35
Platypus	MODERN SPECIES	2	SALL1 (ENSOANG00000048866) #9	CYLD (ENSOANG00000013398) #10	NOD2 (ENSOANG00000013397) #11	SNX20 (ENSOANG00000045105) #12	NKD1 (ENSOANG00000013395) #13	BRD7 (ENSOANG00000001329) #14	ADCY7 (ENSOANG00000050127) #15	TENT4B (ENSOANG00000000589) #16	HEATR3 (ENSOANG00000000588) #17	CNEP1R1 (ENSOANG00000000587) #18	ENSOANG00000000586	ZNF423 (ENSOANG00000000584) #19	ENSOANG00000030661 #20	CBLN1 (ENSOANG00000047584) #21	ST14 (ENSOANG00000000581)	N4BP1 (ENSOANG00000000582) #22	APLP2 (ENSOANG00000000580)	PRDM10 (ENSOANG00000000577)	NFRKB (ENSOANG00000000576)	TMEM45B (ENSOANG00000000574)	BARX2 (ENSOANG00000043204)	ARHGAP32 (ENSOANG00000047423)	KCNJ5 (ENSOANG00000000571)	KCNJ1 (ENSOANG00000000570)	FLI1 (ENSOANG00000029214)	ETS1 (ENSOANG00000012104)	KIRREL3 (ENSOANG00000001361)	ROBO3 (ENSOANG00000038372)	MSANTD2 (ENSOANG00000005980)	ESAM (ENSOANG00000004368)	NRGN (ENSOANG00000049300)
Sauria	ANCESTRAL SPECIES	14	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00940000163703.b	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Archelosauria	ANCESTRAL SPECIES	16	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00940000163703.b	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000203845	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT01040000242725	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Archosauria	ANCESTRAL SPECIES	14	ENSGT00950000183202.a.b	ENSGT01040000241257	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000203845	ENSGT00940000154688.b #30	ENSGT00990000204193	ENSGT01040000242725	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Aves	ANCESTRAL SPECIES	22	ENSGT00950000183202.a.b	ENSGT01040000241257	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000203845	ENSGT00940000154688.b #30	ENSGT01040000242725	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a
Neognathae	ANCESTRAL SPECIES	13	ENSGT00950000183202.a.b	ENSGT01040000241257	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000203845	ENSGT00940000154688.b #30	ENSGT01040000242725	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Galloanserae	ANCESTRAL SPECIES	12	ENSGT00390000010125	ENSGT00950000183202.a.b	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310	ENSGT00390000001014
Anatidae	ANCESTRAL SPECIES	17	ENSGT00390000010125	ENSGT00950000183202.a.b	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT01010000224815	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310	ENSGT00390000001014
Pink-footed goose	MODERN SPECIES	80					CYLD (ENSABRG00000003363) #10	SNX20 (ENSABRG00000003350) #12	NKD1 (ENSABRG00000003329) #13	BRD7 (ENSABRG00000002889) #14	ADCY7 (ENSABRG00000002759) #15	TENT4B (ENSABRG00000002683) #16	HEATR3 (ENSABRG00000002263) #17	CNEP1R1 (ENSABRG00000002231) #18	ZNF423 (ENSABRG00000002216) #19	CBLN1 (ENSABRG00000002207) #21	ENSABRG00000002203	N4BP1 (ENSABRG00000002167) #22	SIAH1 (ENSABRG00000002147) #23	LONP2 (ENSABRG00000002117) #24	PHKB (ENSABRG00000001982) #27	ITFG1 (ENSABRG00000001965) #28	NETO2 (ENSABRG00000001942) #29	ENSABRG00000001917	DNAJA2 (ENSABRG00000001910) #30	ENSABRG00000001876	GPT2 (ENSABRG00000001845) #31	C16orf87 (ENSABRG00000001820) #32	MYLK3 (ENSABRG00000001750) #33	ORC6 (ENSABRG00000001721) #34	VPS35 (ENSABRG00000001695) #35	ENSABRG00000001429	SHCBP1 (ENSABRG00000001406)
Duck	MODERN SPECIES	3	GNAO1 (ENSAPLG00000011027)	AMFR (ENSAPLG00000011375)	NUDT21 (ENSAPLG00000012153)	OGFOD1 (ENSAPLG00000012283)	BBS2 (ENSAPLG00000012564)	MT4 (ENSAPLG00000013360)	ENSAPLG00000021636	NUP93 (ENSAPLG00000014016)	ENSAPLG00000016836	TMEM170A (ENSAPLG00000014893)	ENSAPLG00000015029	WDR59 (ENSAPLG00000015680)	RFWD3 (ENSAPLG00000016162)	ENSAPLG00000002850	ENSAPLG00000016202	N4BP1 (ENSAPLG00000012344) #22	SIAH1 (ENSAPLG00000002314) #23	LONP2 (ENSAPLG00000012127) #24	PHKB (ENSAPLG00000011023) #27	ITFG1 (ENSAPLG00000010587) #28	NETO2 (ENSAPLG00000010563) #29	ENSAPLG00000028752	DNAJA2 (ENSAPLG00000010151) #30	ENSAPLG00000010106	GPT2 (ENSAPLG00000009804) #31	C16orf87 (ENSAPLG00000009799) #32	MYLK3 (ENSAPLG00000009568) #33	ENSAPLG00000020114 #34	VPS35 (ENSAPLG00000009261) #35	ENSAPLG00000020084	SHCBP1 (ENSAPLG00000008932)
Phasianidae	ANCESTRAL SPECIES	12	ENSGT00390000010125	ENSGT00950000183202.a.b	ENSGT00940000155706.x	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00390000011115	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Phasianidae_b	ANCESTRAL SPECIES	14	ENSGT00390000010125	ENSGT00950000183202.a.b	ENSGT00940000155706.x	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301.c #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00390000011115	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Chicken	MODERN SPECIES	2	AKTIP (ENSGALG00010021747)	RBL2 (ENSGALG00010021778)	CHD9 (ENSGALG00010021789)	TOX3 (ENSGALG00010024523) #8	SALL1 (ENSGALG00010022707) #9	CYLD (ENSGALG00010022737) #10	SNX20 (ENSGALG00010022754) #12	NKD1 (ENSGALG00010024038) #13	BRD7 (ENSGALG00010024063) #14	ADCY7 (ENSGALG00010024074) #15	PAPD5 (ENSGALG00010024080) #16	HEATR3 (ENSGALG00010025910) #17	CNEP1R1 (ENSGALG00010024101) #18	ZNF423 (ENSGALG00010024152) #19	CBLN1 (ENSGALG00010024173) #21	N4BP1 (ENSGALG00010024178) #22	SIAH1 (ENSGALG00010024220) #23	LONP2 (ENSGALG00010024230) #24	PHKB (ENSGALG00010024263) #27	ITFG1 (ENSGALG00010024314) #28	NETO2 (ENSGALG00010024340) #29	DNAJA2 (ENSGALG00010023405) #30	ENSGALG00010023468	CDCA9 (ENSGALG00010023513)	GPT2 (ENSGALG00010023612) #31	C16orf87 (ENSGALG00010023665) #32	MYLK3 (ENSGALG00010023686) #33	ORC6 (ENSGALG00010023733) #34	VPS35 (ENSGALG00010023783) #35	ENSGALG00010023832	SHCBP1 (ENSGALG00010023854)
Turkey	MODERN SPECIES	4	ENSMGAG00000005307	ENSMGAG00000018317	MYLK3 (ENSMGAG00000005260) #33	ORC6 (ENSMGAG00000005268) #34	C16orf87 (ENSMGAG00000005255) #32	ENSMGAG00000005229 #31	ENSMGAG00000005213	ENSMGAG00000005195 #30	ENSMGAG00000018952	ENSMGAG00000005178 #29	ENSMGAG00000022235 #27	ENSMGAG00000005122 #27	ENSMGAG00000022110 #24	ENSMGAG00000005089 #24	ENSMGAG00000015587 #23	ENSMGAG00000005064 #22	ENSMGAG00000017995 #21	ENSMGAG00000021372 #19	ENSMGAG00000005058 #19	ENSMGAG00000022910	ENSMGAG00000018529 #18	ENSMGAG00000005016 #17	ENSMGAG00000021282 #17	ENSMGAG00000022137 #16	ENSMGAG00000004957 #16	ENSMGAG00000004849 #15	ENSMGAG00000004779 #14	ENSMGAG00000004728 #13	ENSMGAG00000004775 #12	ENSMGAG00000004739 #10	ENSMGAG00000004704 #9
Japanese quail	MODERN SPECIES	2	AKTIP (ENSCJPG00005012414)	RBL2 (ENSCJPG00005012415)	CHD9 (ENSCJPG00005012416)	TOX3 (ENSCJPG00005014332) #8	SALL1 (ENSCJPG00005014342) #9	CYLD (ENSCJPG00005014348) #10	SNX20 (ENSCJPG00005014349) #12	NKD1 (ENSCJPG00005014352) #13	BRD7 (ENSCJPG00005014353) #14	ADCY7 (ENSCJPG00005014354) #15	TENT4B (ENSCJPG00005014355) #16	HEATR3 (ENSCJPG00005014356) #17	CNEP1R1 (ENSCJPG00005014357) #18	ZNF423 (ENSCJPG00005014360) #19	CBLN1 (ENSCJPG00005014363) #21	N4BP1 (ENSCJPG00005014367) #22	SIAH1 (ENSCJPG00005014369) #23	LONP2 (ENSCJPG00005014370) #24	PHKB (ENSCJPG00005014372) #27	ITFG1 (ENSCJPG00005014373) #28	NETO2 (ENSCJPG00005014374) #29	DNAJA2 (ENSCJPG00005014375) #30	ENSCJPG00005014376	ENSCJPG00005014377	GPT2 (ENSCJPG00005014378) #31	C16orf87 (ENSCJPG00005014379) #32	MYLK3 (ENSCJPG00005014380) #33	ORC6 (ENSCJPG00005014381) #34	VPS35 (ENSCJPG00005014382) #35	SHCBP1 (ENSCJPG00005014383)	UQCRFS1 (ENSCJPG00005014384)
Neognathae_b	ANCESTRAL SPECIES	15	ENSGT01040000241257	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00960000190127	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000203845	ENSGT00940000154688.b #30	ENSGT01040000242725	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Passeriformes	ANCESTRAL SPECIES	13	ENSGT01040000241257	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00960000190127	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000203845	ENSGT00940000154688.b #30	ENSGT01040000242725	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Passeriformes_d	ANCESTRAL SPECIES	13	ENSGT01040000241257	ENSGT00940000155706	ENSGT00940000158043.a #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00960000190127	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000203845	ENSGT00940000154688.b #30	ENSGT01040000242725	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Passeriformes_g	ANCESTRAL SPECIES	17	ENSGT00950000183202.a.b	ENSGT00940000155706	ENSGT00940000158043.a #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00960000190127	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000203845	ENSGT00940000154688.b #30	ENSGT00940000164552.f.b	ENSGT00390000011115	ENSGT00390000008551	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Passeroidea	ANCESTRAL SPECIES	17	ENSGT00390000010125	ENSGT00950000183202.a.b	ENSGT00940000155706	ENSGT00940000158043.a #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000008576 #18	ENSGT00390000012529 #17	ENSGT00940000158492 #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000203845	ENSGT00940000154688.b #30	ENSGT01040000242725	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Common canary	MODERN SPECIES	14	FTO (ENSSCAG00000004856)	AKTIP (ENSSCAG00000004831)	RBL2 (ENSSCAG00000004824)	CHD9 (ENSSCAG00000004806)	TOX3 (ENSSCAG00000004793) #8	SALL1 (ENSSCAG00000004776) #9	CYLD (ENSSCAG00000004758) #10	SNX20 (ENSSCAG00000004752) #12	NKD1 (ENSSCAG00000004748) #13	BRD7 (ENSSCAG00000004669) #14	ADCY7 (ENSSCAG00000004597) #15	TENT4B (ENSSCAG00000004547) #16	HEATR3 (ENSSCAG00000004471) #17	ENSSCAG00000004461	ZNF423 (ENSSCAG00000004455) #19	N4BP1 (ENSSCAG00000004443) #22	SIAH1 (ENSSCAG00000004438) #23	LONP2 (ENSSCAG00000004317) #24	PHKB (ENSSCAG00000004271) #27	ITFG1 (ENSSCAG00000004260) #28	NETO2 (ENSSCAG00000004251) #29	ENSSCAG00000004245	DNAJA2 (ENSSCAG00000004239) #30	ENSSCAG00000004233	GPT2 (ENSSCAG00000004200) #31	C16orf87 (ENSSCAG00000004191) #32	MYLK3 (ENSSCAG00000004186) #33	ORC6 (ENSSCAG00000004180) #34	VPS35 (ENSSCAG00000004178) #35	ENSSCAG00000004175	SHCBP1 (ENSSCAG00000004167)
Zebra finch	MODERN SPECIES	2	AP1G1 (ENSTGUG00000008285)	PHLPP2 (ENSTGUG00000008329)	TAT (ENSTGUG00000008391)	TERF2IP (ENSTGUG00000020387)	KARS1 (ENSTGUG00000008400)	ADAT1 (ENSTGUG00000008449)	GABARAPL2 (ENSTGUG00000024691)	TMEM231 (ENSTGUG00000008461)	BRD7 (ENSTGUG00000008471) #14	ADCY7 (ENSTGUG00000008504) #15	TENT4B (ENSTGUG00000008561) #16	CNEP1R1 (ENSTGUG00000022831) #18	HEATR3 (ENSTGUG00000008582) #17	ZNF423 (ENSTGUG00000008627) #19	CBLN1 (ENSTGUG00000024110) #21	N4BP1 (ENSTGUG00000008647) #22	SIAH1 (ENSTGUG00000008664) #23	LONP2 (ENSTGUG00000008667) #24	PHKB (ENSTGUG00000008701) #27	ITFG1 (ENSTGUG00000008754) #28	NETO2 (ENSTGUG00000025323) #29	DNAJA2 (ENSTGUG00000029001) #30	ENSTGUG00000026236	ENSTGUG00000008822	GPT2 (ENSTGUG00000008832) #31	C16orf87 (ENSTGUG00000028626) #32	MYLK3 (ENSTGUG00000008856) #33	ENSTGUG00000008874 #34	VPS35 (ENSTGUG00000008891) #35	ENSTGUG00000008928	SHCBP1 (ENSTGUG00000008933)
Medium ground finch	MODERN SPECIES	118	AKTIP (ENSGFOG00000014817)	RBL2 (ENSGFOG00000014816)	CHD9 (ENSGFOG00000014815)	TOX3 (ENSGFOG00000014814) #8	SALL1 (ENSGFOG00000014812) #9	CYLD (ENSGFOG00000014811) #10	SNX20 (ENSGFOG00000014810) #12	NKD1 (ENSGFOG00000014809) #13	ENSGFOG00000014808	BRD7 (ENSGFOG00000014801) #14	ADCY7 (ENSGFOG00000014793) #15	TENT4B (ENSGFOG00000014790) #16	HEATR3 (ENSGFOG00000014785) #17	CNEP1R1 (ENSGFOG00000014782) #18	ZNF423 (ENSGFOG00000014781) #19	N4BP1 (ENSGFOG00000014780) #22	SIAH1 (ENSGFOG00000014779) #23	LONP2 (ENSGFOG00000014777) #24
Flycatcher	MODERN SPECIES	2	FTO (ENSFALG00000007914)	TOX3 (ENSFALG00000000072) #8	SALL1 (ENSFALG00000000074) #9	CYLD (ENSFALG00000000075) #10	SNX20 (ENSFALG00000000077) #12	NKD1 (ENSFALG00000000078) #13	ENSFALG00000027589	BRD7 (ENSFALG00000000080) #14	ADCY7 (ENSFALG00000000086) #15	TENT4B (ENSFALG00000000087) #16	HEATR3 (ENSFALG00000000089) #17	CNEP1R1 (ENSFALG00000025598) #18	ZNF423 (ENSFALG00000000097) #19	CBLN1 (ENSFALG00000000098) #21	ENSFALG00000026934	N4BP1 (ENSFALG00000000101) #22	SIAH1 (ENSFALG00000000104) #23	LONP2 (ENSFALG00000000103) #24	PHKB (ENSFALG00000000107) #27	ITFG1 (ENSFALG00000000123) #28	NETO2 (ENSFALG00000000130) #29	DNAJA2 (ENSFALG00000000132) #30	ENSFALG00000000135	GPT2 (ENSFALG00000028158) #31	ENSFALG00000000152 #32	MYLK3 (ENSFALG00000000153) #33	ORC6 (ENSFALG00000028855) #34	VPS35 (ENSFALG00000000176) #35	ENSFALG00000000193	ENSFALG00000028734	UQCRFS1 (ENSFALG00000014175)
Great tit	MODERN SPECIES	2	RBL2 (ENSPMJG00000001882)	CHD9 (ENSPMJG00000001906)	TOX3 (ENSPMJG00000002068) #8	SALL1 (ENSPMJG00000002204) #9	CYLD (ENSPMJG00000002241) #10	SNX20 (ENSPMJG00000002269) #12	NKD1 (ENSPMJG00000002321) #13	ENSPMJG00000002341	BRD7 (ENSPMJG00000002349) #14	ADCY7 (ENSPMJG00000002418) #15	TENT4B (ENSPMJG00000002519) #16	HEATR3 (ENSPMJG00000002534) #17	CNEP1R1 (ENSPMJG00000002544) #18	ZNF423 (ENSPMJG00000002597) #19	CBLN1 (ENSPMJG00000002660) #21	N4BP1 (ENSPMJG00000002728) #22	SIAH1 (ENSPMJG00000002759) #23	LONP2 (ENSPMJG00000002764) #24	PHKB (ENSPMJG00000002784) #27	ITFG1 (ENSPMJG00000002869) #28	NETO2 (ENSPMJG00000002880) #29	DNAJA2 (ENSPMJG00000002889) #30	ENSPMJG00000002906	ENSPMJG00000002915	GPT2 (ENSPMJG00000002932) #31	C16orf87 (ENSPMJG00000002939) #32	ENSPMJG00000002942	ORC6 (ENSPMJG00000002970) #34	VPS35 (ENSPMJG00000002974) #35	ENSPMJG00000002999	SHCBP1 (ENSPMJG00000003015)
Neognathae_c	ANCESTRAL SPECIES	18	ENSGT00950000183202.a.b	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00960000190127	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00940000158492 #19	ENSGT00940000159811.c #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310	ENSGT00390000001014
Golden eagle	MODERN SPECIES	25	AKTIP (ENSACCG00020003199)	RBL2 (ENSACCG00020003164)	CHD9 (ENSACCG00020003121)	TOX3 (ENSACCG00020003095) #8	SALL1 (ENSACCG00020003074) #9	CYLD (ENSACCG00020003038) #10	SNX20 (ENSACCG00020003015) #12	NKD1 (ENSACCG00020002998) #13	BRD7 (ENSACCG00020002949) #14	ADCY7 (ENSACCG00020002875) #15	TENT4B (ENSACCG00020002781) #16	HEATR3 (ENSACCG00020002623) #17	CNEP1R1 (ENSACCG00020002590) #18	ZNF423 (ENSACCG00020002554) #19	CBLN1 (ENSACCG00020002538) #21	N4BP1 (ENSACCG00020002525) #22	SIAH1 (ENSACCG00020002509) #23	LONP2 (ENSACCG00020002482) #24	PHKB (ENSACCG00020002367) #27	ITFG1 (ENSACCG00020002263) #28	NETO2 (ENSACCG00020002228) #29	ENSACCG00020002190	DNAJA2 (ENSACCG00020002167) #30	ENSACCG00020002146	GPT2 (ENSACCG00020002131) #31	C16orf87 (ENSACCG00020002109) #32	ORC6 (ENSACCG00020002091) #34	VPS35 (ENSACCG00020002071) #35	ENSACCG00020002051	SHCBP1 (ENSACCG00020002035)	ENSACCG00020002013
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	4	ENSSHBG00005000095 #29	ENSSHBG00005000089	ENSSHBG00005000087	ENSSHBG00005000083 #31	ENSSHBG00005000080	ENSSHBG00005000077	ENSSHBG00005000067	ENSSHBG00005000059	ENSSHBG00005000057	ENSSHBG00005000042	ENSSHBG00005000034	ENSSHBG00005000016	ENSSHBG00005019748	ENSSHBG00005019731	ENSSHBG00005019719	ENSSHBG00005019712 #22	ENSSHBG00005019703	ENSSHBG00005019698	ENSSHBG00005019695	ENSSHBG00005019162	ENSSHBG00005019101	ENSSHBG00005019095
Kakapo	MODERN SPECIES	19	ENSSHBG00005004768	ENSSHBG00005002921	ENSSHBG00005002199 #8	ENSSHBG00005002192 #9	CYLD (ENSSHBG00005002168) #10	ENSSHBG00005002150 #12	ENSSHBG00005002133 #13	ENSSHBG00005002050	BRD7 (ENSSHBG00005002033) #14	ADCY7 (ENSSHBG00005001991) #15	ENSSHBG00005001960 #16	ENSSHBG00005001903 #17	CNEP1R1 (ENSSHBG00005001851) #18	ENSSHBG00005001748 #19	ENSSHBG00005001669 #21	ENSSHBG00005001653 #22	ENSSHBG00005001629 #23	LONP2 (ENSSHBG00005001588) #24	ENSSHBG00005001570	ENSSHBG00005001553	ENSSHBG00005001540	ENSSHBG00005001524	ENSSHBG00005001492	ENSSHBG00005001466	ENSSHBG00005001409	ENSSHBG00005001350	ENSSHBG00005000156	ENSSHBG00005014347	DPY19L3 (ENSSHBG00005014311)	ENSSHBG00005014261	PDCD5 (ENSSHBG00005014245)
African ostrich	MODERN SPECIES	737	ENSSCUG00000011648	ENSSCUG00000011651	TOX3 (ENSSCUG00000011654) #8	ENSSCUG00000011661 #9	ENSSCUG00000011662 #9	ENSSCUG00000011664	CYLD (ENSSCUG00000011670) #10	SNX20 (ENSSCUG00000011673) #12	NKD1 (ENSSCUG00000011675) #13	BRD7 (ENSSCUG00000011678) #14	ADCY7 (ENSSCUG00000011683) #15	TENT4B (ENSSCUG00000011689) #16	HEATR3 (ENSSCUG00000011696) #17	CNEP1R1 (ENSSCUG00000011701) #18	ZNF423 (ENSSCUG00000011707) #19	N4BP1 (ENSSCUG00000011720) #22	SIAH1 (ENSSCUG00000011723) #23	LONP2 (ENSSCUG00000011726) #24	ABCC12 (ENSSCUG00000011735) #26	PHKB (ENSSCUG00000011790) #27	ITFG1 (ENSSCUG00000011856) #28	NETO2 (ENSSCUG00000011869) #29	DNAJA2 (ENSSCUG00000011872) #30	ENSSCUG00000011876	C16orf87 (ENSSCUG00000011880) #32	GPT2 (ENSSCUG00000011886) #31	MYLK3 (ENSSCUG00000011892) #33	ORC6 (ENSSCUG00000011895) #34	VPS35 (ENSSCUG00000011901) #35	ENSSCUG00000011904	SHCBP1 (ENSSCUG00000011909)
Australian saltwater crocodile	MODERN SPECIES	35	CHD9 (ENSCPRG00005003455)	ENSCPRG00005003475	TOX3 (ENSCPRG00005003482) #8	ENSCPRG00005003503 #9	ENSCPRG00005003506 #9	CYLD (ENSCPRG00005003515) #10	SNX20 (ENSCPRG00005003533) #12	NKD1 (ENSCPRG00005003548) #13	BRD7 (ENSCPRG00005003570) #14	ADCY7 (ENSCPRG00005003595) #15	TENT4B (ENSCPRG00005003615) #16	HEATR3 (ENSCPRG00005003660) #17	CNEP1R1 (ENSCPRG00005003802) #18	ZNF423 (ENSCPRG00005003814) #19	CBLN1 (ENSCPRG00005003876) #21	N4BP1 (ENSCPRG00005003890) #22	SIAH1 (ENSCPRG00005003908) #23	LONP2 (ENSCPRG00005003912) #24	ABCC12 (ENSCPRG00005003919) #26	PHKB (ENSCPRG00005003951) #27	ITFG1 (ENSCPRG00005003999) #28	NETO2 (ENSCPRG00005004001) #29	DNAJA2 (ENSCPRG00005004005) #30	ENSCPRG00005004009	ENSCPRG00005004013	GPT2 (ENSCPRG00005004017) #31	C16orf87 (ENSCPRG00005004023) #32	MYLK3 (ENSCPRG00005004027) #33	ORC6 (ENSCPRG00005004032) #34	VPS35 (ENSCPRG00005004039) #35	ENSCPRG00005004055
Cryptodira	ANCESTRAL SPECIES	14	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00940000163703.b	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Testudinoidea	ANCESTRAL SPECIES	13	ENSGT01000000220330	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492.w.b #19	ENSGT00940000163703.b	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Emydidae	ANCESTRAL SPECIES	33	ENSGT01000000220330	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492.w.b #19	ENSGT00940000163703.b	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310	ENSGT00390000001014
painted turtle	MODERN SPECIES	4	CHD9 (ENSCPBG00000012459)	TOX3 (ENSCPBG00000015917) #8	SALL1 (ENSCPBG00000015924) #9	CYLD (ENSCPBG00000015931) #10	SNX20 (ENSCPBG00000015934) #12	NKD1 (ENSCPBG00000015936) #13	BRD7 (ENSCPBG00000015938) #14	ADCY7 (ENSCPBG00000015953) #15	TENT4B (ENSCPBG00000015960) #16	HEATR3 (ENSCPBG00000015964) #17	CNEP1R1 (ENSCPBG00000015966) #18	ENSCPBG00000015969	ZNF423 (ENSCPBG00000015985) #19	ENSCPBG00000015998	CBLN1 (ENSCPBG00000016000) #21	N4BP1 (ENSCPBG00000016004) #22	SIAH1 (ENSCPBG00000016014) #23	LONP2 (ENSCPBG00000016016) #24	ENSCPBG00000016021 #26	ENSCPBG00000016027 #26	PHKB (ENSCPBG00000016038) #27	ITFG1 (ENSCPBG00000016056) #28	NETO2 (ENSCPBG00000016061) #29	DNAJA2 (ENSCPBG00000016066) #30	ENSCPBG00000016068	ENSCPBG00000016071	GPT2 (ENSCPBG00000016074) #31	C16orf87 (ENSCPBG00000016079) #32	MYLK3 (ENSCPBG00000016081) #33	ORC6 (ENSCPBG00000016088) #34	VPS35 (ENSCPBG00000016092) #35
Three-toed box turtle	MODERN SPECIES	60	ENSTMTG00000022436	TOX3 (ENSTMTG00000022443) #8	SALL1 (ENSTMTG00000022452) #9	CYLD (ENSTMTG00000022457) #10	SNX20 (ENSTMTG00000022462) #12	NKD1 (ENSTMTG00000022468) #13	BRD7 (ENSTMTG00000022489) #14	ADCY7 (ENSTMTG00000022528) #15	TENT4B (ENSTMTG00000022548) #16	HEATR3 (ENSTMTG00000022550) #17	CNEP1R1 (ENSTMTG00000022551) #18	ENSTMTG00000022552	ZNF423 (ENSTMTG00000022555) #19	ENSTMTG00000022559	CBLN1 (ENSTMTG00000022561) #21	N4BP1 (ENSTMTG00000022563) #22	SIAH1 (ENSTMTG00000022565) #23	LONP2 (ENSTMTG00000022570) #24	ABCC12 (ENSTMTG00000022577) #26	PHKB (ENSTMTG00000022592) #27	ITFG1 (ENSTMTG00000022635) #28	NETO2 (ENSTMTG00000022688) #29	DNAJA2 (ENSTMTG00000022691) #30	GPT2 (ENSTMTG00000022695) #31	C16orf87 (ENSTMTG00000022698) #32	MYLK3 (ENSTMTG00000022699) #33	ORC6 (ENSTMTG00000022700) #34	VPS35 (ENSTMTG00000022702) #35	ENSTMTG00000022710	SHCBP1 (ENSTMTG00000022715)	UQCRFS1 (ENSTMTG00000022718)
Testudinidae	ANCESTRAL SPECIES	17	ENSGT00940000155706	ENSGT01000000220330	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492.w.b #19	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a	ENSGT00940000161310
Abingdon island giant tortoise	MODERN SPECIES	1204														ENSCABG00000015270 #19	CBLN1 (ENSCABG00000015269) #21	N4BP1 (ENSCABG00000015262) #22	SIAH1 (ENSCABG00000015259) #23	LONP2 (ENSCABG00000015083) #24	ABCC12 (ENSCABG00000015070) #26	PHKB (ENSCABG00000012168) #27	ITFG1 (ENSCABG00000011788) #28	NETO2 (ENSCABG00000011722) #29
Goode s thornscrub tortoise	MODERN SPECIES	3	ENSGEVG00005013688	TOX3 (ENSGEVG00005013709) #8	ENSGEVG00005013844	SALL1 (ENSGEVG00005013862) #9	CYLD (ENSGEVG00005013915) #10	SNX20 (ENSGEVG00005013947) #12	NKD1 (ENSGEVG00005013964) #13	BRD7 (ENSGEVG00005014130) #14	ADCY7 (ENSGEVG00005014804) #15	TENT4B (ENSGEVG00005014891) #16	HEATR3 (ENSGEVG00005014998) #17	CNEP1R1 (ENSGEVG00005015041) #18	ENSGEVG00005015090	ZNF423 (ENSGEVG00005015167) #19	CBLN1 (ENSGEVG00005015229) #21	N4BP1 (ENSGEVG00005015279) #22	SIAH1 (ENSGEVG00005015318) #23	LONP2 (ENSGEVG00005015339) #24	ABCC12 (ENSGEVG00005015407) #26	PHKB (ENSGEVG00005015655) #27	ITFG1 (ENSGEVG00005015840) #28	NETO2 (ENSGEVG00005015875) #29	DNAJA2 (ENSGEVG00005015899) #30	ENSGEVG00005015919	GPT2 (ENSGEVG00005015954) #31	C16orf87 (ENSGEVG00005015988) #32	MYLK3 (ENSGEVG00005016013) #33	ORC6 (ENSGEVG00005016083) #34	VPS35 (ENSGEVG00005016109) #35	ENSGEVG00005016209	SHCBP1 (ENSGEVG00005016588)
Chinese turtle	MODERN SPECIES	940	SALL1 (ENSPSIG00000008582) #9	CYLD (ENSPSIG00000008623) #10	SNX20 (ENSPSIG00000009076) #12	NKD1 (ENSPSIG00000009112) #13	BRD7 (ENSPSIG00000010123) #14	ENSPSIG00000010651 #15	ENSPSIG00000010658 #15	TENT4B (ENSPSIG00000010667) #16	HEATR3 (ENSPSIG00000010737) #17	CNEP1R1 (ENSPSIG00000011071) #18	ENSPSIG00000011077	ZNF423 (ENSPSIG00000011110) #19	ENSPSIG00000011186	ENSPSIG00000011190	CBLN1 (ENSPSIG00000011197) #21	N4BP1 (ENSPSIG00000011341) #22	SIAH1 (ENSPSIG00000011346) #23	LONP2 (ENSPSIG00000011349) #24	ABCC12 (ENSPSIG00000011610) #26	PHKB (ENSPSIG00000012180) #27	ITFG1 (ENSPSIG00000012582) #28	NETO2 (ENSPSIG00000013009) #29	DNAJA2 (ENSPSIG00000013452) #30	ENSPSIG00000013516	GPT2 (ENSPSIG00000013523) #31	C16orf87 (ENSPSIG00000013617) #32	MYLK3 (ENSPSIG00000013680) #33	ORC6 (ENSPSIG00000014037) #34	VPS35 (ENSPSIG00000014218) #35	ENSPSIG00000014407	SHCBP1 (ENSPSIG00000014494)
Lepidosauria	ANCESTRAL SPECIES	49	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00940000163703.b	ENSGT00950000186190	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00390000011115	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a
Episquamata	ANCESTRAL SPECIES	11	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00950000186190	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00390000011115	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a
Laterata	ANCESTRAL SPECIES	28	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00950000186190	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00990000203845	ENSGT00940000154688.b #30	ENSGT00390000011115	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a
Common wall lizard	MODERN SPECIES	16	RBL2 (ENSPMRG00000018868)	AKTIP (ENSPMRG00000018887)	SNX20 (ENSPMRG00000018900) #12	NKD1 (ENSPMRG00000018905) #13	ENSPMRG00000018916	BRD7 (ENSPMRG00000018967) #14	ADCY7 (ENSPMRG00000019178) #15	TENT4B (ENSPMRG00000019207) #16	HEATR3 (ENSPMRG00000019219) #17	ENSPMRG00000019239	ZNF423 (ENSPMRG00000019246) #19	ENSPMRG00000019258	CBLN1 (ENSPMRG00000019262) #21	ENSPMRG00000019267	ENSPMRG00000019269	N4BP1 (ENSPMRG00000019276) #22	SIAH1 (ENSPMRG00000019284) #23	LONP2 (ENSPMRG00000019286) #24	ABCC12 (ENSPMRG00000019304) #26	PHKB (ENSPMRG00000019388) #27	ITFG1 (ENSPMRG00000019548) #28	NETO2 (ENSPMRG00000019573) #29	DNAJA2 (ENSPMRG00000019588) #30	ENSPMRG00000019592	GPT2 (ENSPMRG00000019601) #31	ENSPMRG00000019607	ENSPMRG00000019612	C16orf87 (ENSPMRG00000019615) #32	MYLK3 (ENSPMRG00000019618) #33	ORC6 (ENSPMRG00000019627) #34	VPS35 (ENSPMRG00000019631) #35
Argentine black and white tegu	MODERN SPECIES	51	CHD9 (ENSSMRG00000005943)	TOX3 (ENSSMRG00000005925) #8	SALL1 (ENSSMRG00000005776) #9	CYLD (ENSSMRG00000005740) #10	SNX20 (ENSSMRG00000005732) #12	NKD1 (ENSSMRG00000005727) #13	BRD7 (ENSSMRG00000005252) #14	ADCY7 (ENSSMRG00000005205) #15	TENT4B (ENSSMRG00000005198) #16	HEATR3 (ENSSMRG00000005192) #17	CNEP1R1 (ENSSMRG00000005189) #18	ENSSMRG00000005169	ZNF423 (ENSSMRG00000005142) #19	ENSSMRG00000005139	CBLN1 (ENSSMRG00000005135) #21	N4BP1 (ENSSMRG00000005116) #22	SIAH1 (ENSSMRG00000005113) #23	LONP2 (ENSSMRG00000005107) #24	ABCC12 (ENSSMRG00000005050) #26	PHKB (ENSSMRG00000005032) #27	ITFG1 (ENSSMRG00000005020) #28	NETO2 (ENSSMRG00000005006) #29	ENSSMRG00000005000	DNAJA2 (ENSSMRG00000004994) #30	ENSSMRG00000004993	GPT2 (ENSSMRG00000004992) #31	C16orf87 (ENSSMRG00000004991) #32	MYLK3 (ENSSMRG00000004989) #33	ORC6 (ENSSMRG00000004986) #34	VPS35 (ENSSMRG00000004978) #35	ENSSMRG00000004805
Toxicofera	ANCESTRAL SPECIES	16	ENSGT00940000155706	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00950000186190	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B #27	ENSGT00390000013367 #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00390000011115	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a
Elapidae	ANCESTRAL SPECIES	17	ENSGT00960000189988	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00950000186190	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00530000063553.b.b.z.a #24	ENSGT00940000154837 #23	ENSGT00530000063553.b.b.z.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B.g #27	ENSGT00390000013367.a #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00390000011115	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35
Elapidae_a	ANCESTRAL SPECIES	28	ENSGT00960000189988	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00950000186190	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b.z.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B.g #27	ENSGT00390000013367.a #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00390000011115	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a
Acanthophiinae	ANCESTRAL SPECIES	26	ENSGT00960000189988	ENSGT00940000158043 #8	ENSGT00940000155938 #9	ENSGT00390000018123.a.a #10	ENSGT00530000063759.a #12	ENSGT00440000033589.c #13	ENSGT00950000183170.a #14	ENSGT00940000159096 #15	ENSGT00940000158301 #16	ENSGT00390000012529 #17	ENSGT00390000008576 #18	ENSGT00530000064134.a.a	ENSGT00940000158492 #19	ENSGT00950000186190	ENSGT00940000159811 #21	ENSGT00940000158682 #22	ENSGT00940000154837 #23	ENSGT00530000063553.b.b.z.b #24	ENSGT00940000159578 #26	ENSGT00950000183118.B.g #27	ENSGT00390000013367.a #28	ENSGT00940000156041 #29	ENSGT00940000154688.b #30	ENSGT00990000203845	ENSGT00390000011115	ENSGT00940000159061 #31	ENSGT00390000009505 #32	ENSGT00940000160007 #33	ENSGT00390000007370 #34	ENSGT00390000007315 #35	ENSGT00940000163206.a
Mainland tiger snake	MODERN SPECIES	79			CYLD (ENSNSUG00000010472) #10	SNX20 (ENSNSUG00000010473) #12	NKD1 (ENSNSUG00000010474) #13	BRD7 (ENSNSUG00000010476) #14	ENSNSUG00000010600 #15	ENSNSUG00000010601 #15	TENT4B (ENSNSUG00000010603) #16	HEATR3 (ENSNSUG00000010606) #17	CNEP1R1 (ENSNSUG00000010648) #18	ENSNSUG00000010652	ZNF423 (ENSNSUG00000010656) #19	ENSNSUG00000010658	CBLN1 (ENSNSUG00000010659) #21	N4BP1 (ENSNSUG00000010675) #22	LONP2 (ENSNSUG00000010678) #24	ABCC12 (ENSNSUG00000010806) #26	PHKB (ENSNSUG00000010829) #27	ITFG1 (ENSNSUG00000012472) #28	NETO2 (ENSNSUG00000012500) #29	DNAJA2 (ENSNSUG00000012537) #30	ENSNSUG00000012549	GPT2 (ENSNSUG00000012561) #31	C16orf87 (ENSNSUG00000012690) #32	MYLK3 (ENSNSUG00000012691) #33	ORC6 (ENSNSUG00000012692) #34	VPS35 (ENSNSUG00000012693) #35	ENSNSUG00000012694	SHCBP1 (ENSNSUG00000012709)	UQCRFS1 (ENSNSUG00000012710)
Eastern brown snake	MODERN SPECIES	65	TOX3 (ENSPTXG00000009239) #8	SALL1 (ENSPTXG00000009238) #9	ENSPTXG00000009237	CYLD (ENSPTXG00000009236) #10	SNX20 (ENSPTXG00000009222) #12	NKD1 (ENSPTXG00000009220) #13	BRD7 (ENSPTXG00000009078) #14	ADCY7 (ENSPTXG00000009074) #15	TENT4B (ENSPTXG00000009072) #16	HEATR3 (ENSPTXG00000009063) #17	CNEP1R1 (ENSPTXG00000009061) #18	ENSPTXG00000009059	ZNF423 (ENSPTXG00000009058) #19	ENSPTXG00000009057	ENSPTXG00000009056 #21	N4BP1 (ENSPTXG00000009055) #22	SIAH1 (ENSPTXG00000009054) #23	LONP2 (ENSPTXG00000009053) #24	ABCC12 (ENSPTXG00000009051) #26	ENSPTXG00000009048 #27	ITFG1 (ENSPTXG00000009047) #28	NETO2 (ENSPTXG00000009046) #29	ENSPTXG00000009045	DNAJA2 (ENSPTXG00000009044) #30	ENSPTXG00000009043	GPT2 (ENSPTXG00000009042) #31	C16orf87 (ENSPTXG00000009041) #32	MYLK3 (ENSPTXG00000009040) #33	ORC6 (ENSPTXG00000009039) #34	VPS35 (ENSPTXG00000009038) #35	ENSPTXG00000009037
Blue-lipped sea krait	MODERN SPECIES	647																N4BP1 (ENSLLTG00000017372) #22	SIAH1 (ENSLLTG00000017367) #23
Indian cobra	MODERN SPECIES	12	CHD9 (ENSNNAG00000014441)	ENSNNAG00000013764	SALL1 (ENSNNAG00000013749) #9	CYLD (ENSNNAG00000013712) #10	SNX20 (ENSNNAG00000013703) #12	NKD1 (ENSNNAG00000013679) #13	BRD7 (ENSNNAG00000013586) #14	ADCY7 (ENSNNAG00000013071) #15	TENT4B (ENSNNAG00000012985) #16	HEATR3 (ENSNNAG00000012932) #17	CNEP1R1 (ENSNNAG00000012910) #18	ENSNNAG00000012817	ENSNNAG00000012795 #19	ENSNNAG00000012776 #19	CBLN1 (ENSNNAG00000012761) #21	N4BP1 (ENSNNAG00000012736) #22	ENSNNAG00000012720 #24	SIAH1 (ENSNNAG00000012705) #23	ENSNNAG00000012593 #24	ENSNNAG00000012561 #26	ENSNNAG00000012537 #26	ENSNNAG00000012496 #26	PHKB (ENSNNAG00000012262) #27	ITFG1 (ENSNNAG00000012137) #28	NETO2 (ENSNNAG00000012025) #29	ENSNNAG00000011998	DNAJA2 (ENSNNAG00000011972) #30	ENSNNAG00000011909	GPT2 (ENSNNAG00000011858) #31	MYLK3 (ENSNNAG00000011712) #33	ORC6 (ENSNNAG00000011683) #34
Lizard	MODERN SPECIES	1081														ENSACAG00000028688	ENSACAG00000006094 #21	ENSACAG00000006034 #22	ENSACAG00000006002
tuatara	MODERN SPECIES	1230														ZNF423 (ENSSPUG00000003058) #19	ENSSPUG00000003014	N4BP1 (ENSSPUG00000003001) #22