Glires	ANCESTRAL SPECIES	16	ENSGT00940000155782	ENSGT00940000160317	ENSGT00910000145900	ENSGT00390000014513	ENSGT00940000160250	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00950000183002.C #37	ENSGT00990000203892	ENSGT00940000154078.a.a
Rodentia	ANCESTRAL SPECIES	16	ENSGT00940000155782	ENSGT00940000160317	ENSGT00910000145900	ENSGT00390000014513	ENSGT00940000160250	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00990000203892	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00390000014513	ENSGT00940000160250	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00990000203892	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a
Sciuridae	ANCESTRAL SPECIES	21	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00390000014513	ENSGT00940000160250	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00990000203892	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a
Marmotini	ANCESTRAL SPECIES	16	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00390000014513	ENSGT00940000160250	ENSGT01100000267139	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00990000203892	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a
Marmotini_b	ANCESTRAL SPECIES	76	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a	ENSGT00390000004495
Arctic ground squirrel	MODERN SPECIES	373												NOLC1 (ENSUPAG00010009783) #18	PPRC1 (ENSUPAG00010009814) #19	ENSUPAG00010009826 #20	HPS6 (ENSUPAG00010009845) #21	ARMH3 (ENSUPAG00010009848) #22	KCNIP2 (ENSUPAG00010009866) #23	OGA (ENSUPAG00010010052) #24	NPM3 (ENSUPAG00010010073) #25	FGF8 (ENSUPAG00010010083) #26	FBXW4 (ENSUPAG00010010202) #27	DPCD (ENSUPAG00010010220) #28	POLL (ENSUPAG00010010241) #29	BTRC (ENSUPAG00010010245) #30	ENSUPAG00010010321 #31	LBX1 (ENSUPAG00010010328) #32	TLX1 (ENSUPAG00010010336) #33	KAZALD1 (ENSUPAG00010010340) #34	SFXN3 (ENSUPAG00010010359) #35	ENSUPAG00010010444 #36	ENSUPAG00010010561 #37
Squirrel	MODERN SPECIES	200	SUFU (ENSSTOG00000026796)	ACTR1A (ENSSTOG00000014434)	MFSD13A (ENSSTOG00000014428)	CUEDC2 (ENSSTOG00000022008)	FBXL15 (ENSSTOG00000022528)	PSD (ENSSTOG00000021577)	NFKB2 (ENSSTOG00000002191)	GBF1 (ENSSTOG00000002171)	PITX3 (ENSSTOG00000015025)	ELOVL3 (ENSSTOG00000015013)	NOLC1 (ENSSTOG00000002168) #18	ENSSTOG00000002156 #19	ENSSTOG00000034359 #19	LDB1 (ENSSTOG00000002139) #20	HPS6 (ENSSTOG00000024918) #21	ARMH3 (ENSSTOG00000015633) #22	KCNIP2 (ENSSTOG00000021030) #23	ENSSTOG00000032901 #24	NPM3 (ENSSTOG00000022621) #25	FGF8 (ENSSTOG00000023351) #26	FBXW4 (ENSSTOG00000011495) #27	DPCD (ENSSTOG00000011490) #28	POLL (ENSSTOG00000011485) #29	BTRC (ENSSTOG00000022481) #30	LBX1 (ENSSTOG00000006491) #32	ENSSTOG00000023842 #33	KAZALD1 (ENSSTOG00000015240) #34	SFXN3 (ENSSTOG00000026614) #35	PDZD7 (ENSSTOG00000009046) #37	LZTS2 (ENSSTOG00000015232)	TWNK (ENSSTOG00000009030)
Alpin marmot	MODERN SPECIES	39	ACTR1A (ENSMMMG00000023344)	MFSD13A (ENSMMMG00000023338)	CUEDC2 (ENSMMMG00000023329)	FBXL15 (ENSMMMG00000023324)	ENSMMMG00000023323	ENSMMMG00000023315	ENSMMMG00000023312	NFKB2 (ENSMMMG00000023297)	GBF1 (ENSMMMG00000023283)	PITX3 (ENSMMMG00000023281)	ELOVL3 (ENSMMMG00000023279)	NOLC1 (ENSMMMG00000023274) #18	PPRC1 (ENSMMMG00000023259) #19	LDB1 (ENSMMMG00000023248) #20	HPS6 (ENSMMMG00000023243) #21	ARMH3 (ENSMMMG00000023233) #22	KCNIP2 (ENSMMMG00000023225) #23	OGA (ENSMMMG00000023220) #24	NPM3 (ENSMMMG00000023217) #25	FGF8 (ENSMMMG00000023215) #26	FBXW4 (ENSMMMG00000023212) #27	DPCD (ENSMMMG00000023210) #28	POLL (ENSMMMG00000023200) #29	BTRC (ENSMMMG00000023182) #30	LBX1 (ENSMMMG00000023177) #32	ENSMMMG00000023172 #33	KAZALD1 (ENSMMMG00000023167) #34	SFXN3 (ENSMMMG00000023149) #35	ENSMMMG00000023146	ENSMMMG00000023144 #37	ENSMMMG00000023099 #37
Eurasian red squirrel	MODERN SPECIES	13	TRIM8 (ENSSVLG00005003874)	ENSSVLG00005003897	ACTR1A (ENSSVLG00005003935)	MFSD13A (ENSSVLG00005003972)	CUEDC2 (ENSSVLG00005004017)	FBXL15 (ENSSVLG00005004039)	PSD (ENSSVLG00005004064)	NFKB2 (ENSSVLG00005004099)	GBF1 (ENSSVLG00005004145)	PITX3 (ENSSVLG00005004181)	ELOVL3 (ENSSVLG00005004199)	NOLC1 (ENSSVLG00005004225) #18	PPRC1 (ENSSVLG00005004252) #19	LDB1 (ENSSVLG00005004323) #20	HPS6 (ENSSVLG00005004366) #21	ARMH3 (ENSSVLG00005004399) #22	KCNIP2 (ENSSVLG00005004570) #23	OGA (ENSSVLG00005004824) #24	FGF8 (ENSSVLG00005005038) #26	FBXW4 (ENSSVLG00005005056) #27	DPCD (ENSSVLG00005005104) #28	POLL (ENSSVLG00005005135) #29	BTRC (ENSSVLG00005005205) #30	LBX1 (ENSSVLG00005005245) #32	TLX1 (ENSSVLG00005005266) #33	KAZALD1 (ENSSVLG00005005289) #34	SFXN3 (ENSSVLG00005005315) #35	PDZD7 (ENSSVLG00005005347) #37	LZTS2 (ENSSVLG00005005380)	TWNK (ENSSVLG00005005412)	MRPL43 (ENSSVLG00005005460)
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a	ENSGT00390000004495
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a	ENSGT00390000004495
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a	ENSGT00390000004495
Long-tailed chinchilla	MODERN SPECIES	192	TRIM8 (ENSCLAG00000001092)	SUFU (ENSCLAG00000001257)	ACTR1A (ENSCLAG00000001321)	MFSD13A (ENSCLAG00000001530)	CUEDC2 (ENSCLAG00000001551)	FBXL15 (ENSCLAG00000001578)	PSD (ENSCLAG00000003741)	NFKB2 (ENSCLAG00000004104)	GBF1 (ENSCLAG00000004338)	PITX3 (ENSCLAG00000005073)	ELOVL3 (ENSCLAG00000005342)	NOLC1 (ENSCLAG00000001046) #18	PPRC1 (ENSCLAG00000001364) #19	LDB1 (ENSCLAG00000001555) #20	HPS6 (ENSCLAG00000001624) #21	ARMH3 (ENSCLAG00000001673) #22	KCNIP2 (ENSCLAG00000000954) #23	OGA (ENSCLAG00000001003) #24	FGF8 (ENSCLAG00000001075) #26	FBXW4 (ENSCLAG00000001132) #27	DPCD (ENSCLAG00000001147) #28	POLL (ENSCLAG00000001165) #29	BTRC (ENSCLAG00000001243) #30	LBX1 (ENSCLAG00000001298) #32	ENSCLAG00000001309 #33	ENSCLAG00000001318 #34	SFXN3 (ENSCLAG00000001996) #35	PDZD7 (ENSCLAG00000003178) #37	LZTS2 (ENSCLAG00000003292)	TWNK (ENSCLAG00000003486)	MRPL43 (ENSCLAG00000003510)
Degu	MODERN SPECIES	83	MFSD13A (ENSODEG00000008625)	CUEDC2 (ENSODEG00000007262)	FBXL15 (ENSODEG00000007513)	PSD (ENSODEG00000006424)	NFKB2 (ENSODEG00000007396)	ENSODEG00000006690	GBF1 (ENSODEG00000007076)	PITX3 (ENSODEG00000007162)	ELOVL3 (ENSODEG00000006606)	NOLC1 (ENSODEG00000006304) #18	ENSODEG00000006985 #19	ENSODEG00000009568 #19	LDB1 (ENSODEG00000009090) #20	HPS6 (ENSODEG00000007638) #21	ENSODEG00000019424	ARMH3 (ENSODEG00000007299) #22	ENSODEG00000010569	KCNIP2 (ENSODEG00000007199) #23	ENSODEG00000019634	OGA (ENSODEG00000008001) #24	NPM3 (ENSODEG00000006704) #25	FGF8 (ENSODEG00000006423) #26	FBXW4 (ENSODEG00000007897) #27	DPCD (ENSODEG00000005983) #28	POLL (ENSODEG00000007469) #29	BTRC (ENSODEG00000008464) #30	LBX1 (ENSODEG00000006684) #32	ENSODEG00000006094 #33	KAZALD1 (ENSODEG00000005804) #34	SFXN3 (ENSODEG00000007542) #35	PDZD7 (ENSODEG00000006718) #37
Guinea pig	MODERN SPECIES	11	TRIM8 (ENSCPOG00000012305)	SUFU (ENSCPOG00000011097)	ACTR1A (ENSCPOG00000011090)	MFSD13A (ENSCPOG00000011087)	CUEDC2 (ENSCPOG00000032492)	FBXL15 (ENSCPOG00000021451)	PSD (ENSCPOG00000000156)	NFKB2 (ENSCPOG00000004847)	GBF1 (ENSCPOG00000004514)	PITX3 (ENSCPOG00000036365)	ELOVL3 (ENSCPOG00000014884)	NOLC1 (ENSCPOG00000004504) #18	PPRC1 (ENSCPOG00000032149) #19	LDB1 (ENSCPOG00000010311) #20	HPS6 (ENSCPOG00000006084) #21	ARMH3 (ENSCPOG00000031847) #22	KCNIP2 (ENSCPOG00000011918) #23	OGA (ENSCPOG00000000219) #24	NPM3 (ENSCPOG00000006301) #25	FGF8 (ENSCPOG00000021533) #26	ENSCPOG00000032448 #27	DPCD (ENSCPOG00000005499) #28	POLL (ENSCPOG00000005493) #29	BTRC (ENSCPOG00000005488) #30	LBX1 (ENSCPOG00000025830) #32	TLX1 (ENSCPOG00000003194) #33	KAZALD1 (ENSCPOG00000015270) #34	SFXN3 (ENSCPOG00000000955) #35	ENSCPOG00000000952 #37	LZTS2 (ENSCPOG00000035545)	TWNK (ENSCPOG00000000950)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	4	ACTR1A (ENSHGLG00000044976)	MFSD13A (ENSHGLG00000003127)	ENSHGLG00000041712	CUEDC2 (ENSHGLG00000002956)	FBXL15 (ENSHGLG00000002839)	PSD (ENSHGLG00000002612)	GBF1 (ENSHGLG00000002115)	ENSHGLG00000042455	PITX3 (ENSHGLG00000001851)	ELOVL3 (ENSHGLG00000003511)	ENSHGLG00000049553	NOLC1 (ENSHGLG00000003156) #18	PPRC1 (ENSHGLG00000002783) #19	LDB1 (ENSHGLG00000002254) #20	HPS6 (ENSHGLG00000020621) #21	ARMH3 (ENSHGLG00000002014) #22	ENSHGLG00000043110 #22	KCNIP2 (ENSHGLG00000019185) #23	OGA (ENSHGLG00000019033) #24	NPM3 (ENSHGLG00000049984) #25	FGF8 (ENSHGLG00000013482) #26	FBXW4 (ENSHGLG00000018911) #27	DPCD (ENSHGLG00000019507) #28	POLL (ENSHGLG00000019504) #29	ENSHGLG00000002588 #30	ENSHGLG00000019498	LBX1 (ENSHGLG00000047414) #32	TLX1 (ENSHGLG00000001823) #33	KAZALD1 (ENSHGLG00000002854) #34	SFXN3 (ENSHGLG00000002107) #35	PDZD7 (ENSHGLG00000046047) #37
Naked mole-rat female	MODERN SPECIES	4	MFSD13A (ENSHGLG00000003127)	ENSHGLG00000041712	CUEDC2 (ENSHGLG00000002956)	FBXL15 (ENSHGLG00000002839)	PSD (ENSHGLG00000002612)	GBF1 (ENSHGLG00000002115)	ENSHGLG00000042455	PITX3 (ENSHGLG00000001851)	ELOVL3 (ENSHGLG00000003511)	ENSHGLG00000049553	NOLC1 (ENSHGLG00000003156) #18	PPRC1 (ENSHGLG00000002783) #19	LDB1 (ENSHGLG00000002254) #20	HPS6 (ENSHGLG00000020621) #21	ARMH3 (ENSHGLG00000002014) #22	ENSHGLG00000043110 #22	KCNIP2 (ENSHGLG00000019185) #23	OGA (ENSHGLG00000019033) #24	NPM3 (ENSHGLG00000049984) #25	FGF8 (ENSHGLG00000013482) #26	FBXW4 (ENSHGLG00000018911) #27	DPCD (ENSHGLG00000019507) #28	POLL (ENSHGLG00000019504) #29	ENSHGLG00000002588 #30	ENSHGLG00000019498	LBX1 (ENSHGLG00000047414) #32	TLX1 (ENSHGLG00000001823) #33	KAZALD1 (ENSHGLG00000002854) #34	SFXN3 (ENSHGLG00000002107) #35	PDZD7 (ENSHGLG00000046047) #37	ENSHGLG00000035111 #37
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00910000145900	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00990000203892	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00910000145900	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00990000203892	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a
Muroidea	ANCESTRAL SPECIES	1	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00910000145900	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00990000203892	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a
Muroidea_A	ANCESTRAL SPECIES		ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00910000145900	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00990000203892	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00990000203892	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a	ENSGT00390000004495
Golden Hamster	MODERN SPECIES	617	Trim8 (ENSMAUG00000015163)	Sufu (ENSMAUG00000017018)	ENSMAUG00000017290	Mfsd13a (ENSMAUG00000014106)	Cuedc2 (ENSMAUG00000015254)	Fbxl15 (ENSMAUG00000015625)	Psd (ENSMAUG00000017086)	Nfkb2 (ENSMAUG00000016292)	ENSMAUG00000017130	ENSMAUG00000017791	Pitx3 (ENSMAUG00000015434)	Elovl3 (ENSMAUG00000013792)	Pprc1 (ENSMAUG00000016674) #19	Ldb1 (ENSMAUG00000018515) #20	Hps6 (ENSMAUG00000002039) #21	Armh3 (ENSMAUG00000019449) #22	Kcnip2 (ENSMAUG00000019652) #23	Oga (ENSMAUG00000015052) #24	Npm3 (ENSMAUG00000015218) #25	Fgf8 (ENSMAUG00000016383) #26	ENSMAUG00000015569	ENSMAUG00000015787 #27	Dpcd (ENSMAUG00000017884) #28	Poll (ENSMAUG00000014674) #29	Btrc (ENSMAUG00000016001) #30	Lbx1 (ENSMAUG00000015198) #32	Tlx1 (ENSMAUG00000015538) #33	Kazald1 (ENSMAUG00000017475) #34	Sfxn3 (ENSMAUG00000017975) #35	ENSMAUG00000015875 #37	Lzts2 (ENSMAUG00000018041)
Chinese hamster chok1gshd	MODERN SPECIES	215	Trim8 (ENSCGRG00001024342)	Sufu (ENSCGRG00001006263)	Actr1a (ENSCGRG00001013578)	Mfsd13a (ENSCGRG00001017917)	Fbxl15 (ENSCGRG00001022005)	Cuedc2 (ENSCGRG00001022970)	Psd (ENSCGRG00001000373)	Nfkb2 (ENSCGRG00001009030)	Gbf1 (ENSCGRG00001022494)	Pitx3 (ENSCGRG00001024147)	ELOVL3 (ENSCGRG00001005008)	Nolc1 (ENSCGRG00001009806) #18	Pprc1 (ENSCGRG00001011726) #19	Ldb1 (ENSCGRG00001020743) #20	Hps6 (ENSCGRG00001010957) #21	Armh3 (ENSCGRG00001015570) #22	Kcnip2 (ENSCGRG00001019478) #23	Oga (ENSCGRG00001020553) #24	Npm3 (ENSCGRG00001013345) #25	Fgf8 (ENSCGRG00001015246) #26	Fbxw4 (ENSCGRG00001003996) #27	Dpcd (ENSCGRG00001005917) #28	Poll (ENSCGRG00001010513) #29	Btrc (ENSCGRG00001015459) #30	Lbx1 (ENSCGRG00001017540) #32	Tlx1 (ENSCGRG00001021053) #33	Kazald1 (ENSCGRG00001000227) #34	Sfxn3 (ENSCGRG00001015591) #35	Pdzd7 (ENSCGRG00001017672) #37	Lzts2 (ENSCGRG00001023049)	Twnk (ENSCGRG00001000710)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000157919	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00990000203892	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a
Prairie vole	MODERN SPECIES	16	Sufu (ENSMOCG00000016812)	Actr1a (ENSMOCG00000020878)	Mfsd13a (ENSMOCG00000018673)	Cuedc2 (ENSMOCG00000001067)	Fbxl15 (ENSMOCG00000022420)	Psd (ENSMOCG00000014904)	Nfkb2 (ENSMOCG00000011590)	Gbf1 (ENSMOCG00000022834)	Pitx3 (ENSMOCG00000012980)	Elovl3 (ENSMOCG00000022790)	Nolc1 (ENSMOCG00000015232) #18	ENSMOCG00000018283 #19	ENSMOCG00000014044 #19	ENSMOCG00000004202 #20	Hps6 (ENSMOCG00000001347) #21	Armh3 (ENSMOCG00000011932) #22	Kcnip2 (ENSMOCG00000022254) #23	Oga (ENSMOCG00000014392) #24	Npm3 (ENSMOCG00000013601) #25	Fgf8 (ENSMOCG00000021407) #26	Fbxw4 (ENSMOCG00000013178) #27	Dpcd (ENSMOCG00000013756) #28	Poll (ENSMOCG00000006566) #29	Btrc (ENSMOCG00000002451) #30	Lbx1 (ENSMOCG00000018337) #32	Tlx1 (ENSMOCG00000017096) #33	Kazald1 (ENSMOCG00000015994) #34	Sfxn3 (ENSMOCG00000022608) #35	ENSMOCG00000019069 #37	ENSMOCG00000014095 #37	Lzts2 (ENSMOCG00000012162)
Northern American deer mouse	MODERN SPECIES		Trim8 (ENSPEMG00000027998)	Sufu (ENSPEMG00000009470)	Actr1a (ENSPEMG00000006737)	Mfsd13a (ENSPEMG00000016696)	Cuedc2 (ENSPEMG00000012762)	Fbxl15 (ENSPEMG00000012550)	Psd (ENSPEMG00000010757)	Nfkb2 (ENSPEMG00000014947)	Gbf1 (ENSPEMG00000018772)	Pitx3 (ENSPEMG00000026373)	Elovl3 (ENSPEMG00000000778)	ENSPEMG00000026626	Pprc1 (ENSPEMG00000016590) #19	Ldb1 (ENSPEMG00000011489) #20	Hps6 (ENSPEMG00000003992) #21	Armh3 (ENSPEMG00000014466) #22	Kcnip2 (ENSPEMG00000015045) #23	Oga (ENSPEMG00000008883) #24	Npm3 (ENSPEMG00000007731) #25	Fgf8 (ENSPEMG00000012905) #26	Fbxw4 (ENSPEMG00000024901) #27	Dpcd (ENSPEMG00000014479) #28	Poll (ENSPEMG00000006876) #29	Btrc (ENSPEMG00000014260) #30	Lbx1 (ENSPEMG00000026119) #32	Tlx1 (ENSPEMG00000016966) #33	Kazald1 (ENSPEMG00000018686) #34	Sfxn3 (ENSPEMG00000012869) #35	ENSPEMG00000030678	Pdzd7 (ENSPEMG00000004000) #37	Lzts2 (ENSPEMG00000013419)
Murinae	ANCESTRAL SPECIES		ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00910000145900	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801.d	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00950000183002.C #37	ENSGT00990000203892	ENSGT00940000154078.a.a
Mus	ANCESTRAL SPECIES		ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00910000145900	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801.d	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00950000183002.C #37	ENSGT00990000203892	ENSGT00940000154078.a.a
Mus_A	ANCESTRAL SPECIES	16	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00910000145900	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801.d	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a.p #35	ENSGT00950000183002.C #37	ENSGT00990000203892	ENSGT00940000154078.a.a
Mus_B	ANCESTRAL SPECIES	16	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00910000145900	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801.d	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a.p #35	ENSGT00950000183002.C #37	ENSGT00990000203892	ENSGT00940000154078.a.a
Mus_C	ANCESTRAL SPECIES	24	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00910000145900	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801.d	ENSGT01050000244965.a	ENSGT00730000111092.b #18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000001546 #21	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a.p #35	ENSGT00950000183002.C #37	ENSGT00990000203892	ENSGT00940000154078.a.a
spretus	MODERN SPECIES	10	Trim8 (MGP_SPRETEiJ_G0023959)	Sufu (MGP_SPRETEiJ_G0023958)	Actr1a (MGP_SPRETEiJ_G0023957)	Mfsd13a (MGP_SPRETEiJ_G0023956)	Cuedc2 (MGP_SPRETEiJ_G0023955)	Fbxl15 (MGP_SPRETEiJ_G0023954)	Psd (MGP_SPRETEiJ_G0023953)	Nfkb2 (MGP_SPRETEiJ_G0023952)	Gbf1 (MGP_SPRETEiJ_G0023951)	Pitx3 (MGP_SPRETEiJ_G0023950)	Elovl3 (MGP_SPRETEiJ_G0023949)	Nolc1 (MGP_SPRETEiJ_G0023948) #18	Pprc1 (MGP_SPRETEiJ_G0023947) #19	Ldb1 (MGP_SPRETEiJ_G0023946) #20	Hps6 (MGP_SPRETEiJ_G0023945) #21	Armh3 (MGP_SPRETEiJ_G0023944) #22	Kcnip2 (MGP_SPRETEiJ_G0023943) #23	Oga (MGP_SPRETEiJ_G0023942) #24	Npm3 (MGP_SPRETEiJ_G0023941) #25	Fgf8 (MGP_SPRETEiJ_G0023940) #26	MGP_SPRETEiJ_G0023939 #27	Dpcd (MGP_SPRETEiJ_G0023938) #28	Poll (MGP_SPRETEiJ_G0023937) #29	Btrc (MGP_SPRETEiJ_G0023936) #30	Lbx1 (MGP_SPRETEiJ_G0023935) #32	Tlx1 (MGP_SPRETEiJ_G0023934) #33	Kazald1 (MGP_SPRETEiJ_G0023933) #34	Sfxn3 (MGP_SPRETEiJ_G0023932) #35	Pdzd7 (MGP_SPRETEiJ_G0023931) #37	Lzts2 (MGP_SPRETEiJ_G0023930)	Twnk (MGP_SPRETEiJ_G0023929)
Steppe mouse	MODERN SPECIES	3317	Sufu (ENSMSIG00000011215)	Actr1a (ENSMSIG00000011269)	Mfsd13a (ENSMSIG00000011296)	2310034G01Rik (ENSMSIG00000011343)	Cuedc2 (ENSMSIG00000011362)	Fbxl15 (ENSMSIG00000011465)	Psd (ENSMSIG00000011495)	Nfkb2 (ENSMSIG00000011557)	Gbf1 (ENSMSIG00000011585)	Pitx3 (ENSMSIG00000011679)	Elovl3 (ENSMSIG00000011691)	Nolc1 (ENSMSIG00000011702) #18	Pprc1 (ENSMSIG00000011750) #19	Ldb1 (ENSMSIG00000011766) #20	Hps6 (ENSMSIG00000011802) #21	Armh3 (ENSMSIG00000011813) #22	ENSMSIG00000011884 #23	Oga (ENSMSIG00000012429) #24	Npm3 (ENSMSIG00000012497) #25	Fgf8 (ENSMSIG00000012521) #26	ENSMSIG00000012591 #27	ENSMSIG00000012629 #28	Poll (ENSMSIG00000012645) #29	Btrc (ENSMSIG00000012680) #30	Lbx1 (ENSMSIG00000012769) #32	Tlx1 (ENSMSIG00000012781) #33	Kazald1 (ENSMSIG00000012802) #34	Sfxn3 (ENSMSIG00000012828) #35	Pdzd7 (ENSMSIG00000012912) #37	ENSMSIG00000012980	Lzts2 (ENSMSIG00000012984)
Mouse	MODERN SPECIES	10	Sufu (ENSMUSG00000025231)	Actr1a (ENSMUSG00000025228)	2310034G01Rik (ENSMUSG00000099655)	Mfsd13a (ENSMUSG00000025227)	Cuedc2 (ENSMUSG00000036748)	Fbxl15 (ENSMUSG00000025226)	Psd (ENSMUSG00000037126)	Nfkb2 (ENSMUSG00000025225)	Gbf1 (ENSMUSG00000025224)	Pitx3 (ENSMUSG00000025229)	Elovl3 (ENSMUSG00000038754)	Nolc1 (ENSMUSG00000015176) #18	Pprc1 (ENSMUSG00000055491) #19	Ldb1 (ENSMUSG00000025223) #20	Hps6 (ENSMUSG00000074811) #21	Armh3 (ENSMUSG00000039901) #22	Kcnip2 (ENSMUSG00000025221) #23	Oga (ENSMUSG00000025220) #24	Npm3 (ENSMUSG00000056209) #25	Fgf8 (ENSMUSG00000025219) #26	Fbxw4 (ENSMUSG00000040913) #27	Dpcd (ENSMUSG00000041035) #28	Poll (ENSMUSG00000025218) #29	Btrc (ENSMUSG00000025217) #30	Lbx1 (ENSMUSG00000025216) #32	Tlx1 (ENSMUSG00000025215) #33	Kazald1 (ENSMUSG00000025213) #34	Sfxn3 (ENSMUSG00000025212) #35	Pdzd7 (ENSMUSG00000074818) #37	Lzts2 (ENSMUSG00000035342)	Twnk (ENSMUSG00000025209)
Ryukyu mouse	MODERN SPECIES	10	Trim8 (MGP_CAROLIEiJ_G0023038)	Sufu (MGP_CAROLIEiJ_G0023037)	Actr1a (MGP_CAROLIEiJ_G0023036)	Mfsd13a (MGP_CAROLIEiJ_G0023035)	Cuedc2 (MGP_CAROLIEiJ_G0023034)	Fbxl15 (MGP_CAROLIEiJ_G0023033)	Psd (MGP_CAROLIEiJ_G0023032)	Nfkb2 (MGP_CAROLIEiJ_G0023031)	Gbf1 (MGP_CAROLIEiJ_G0023030)	Pitx3 (MGP_CAROLIEiJ_G0023029)	Elovl3 (MGP_CAROLIEiJ_G0023028)	Nolc1 (MGP_CAROLIEiJ_G0023027) #18	Pprc1 (MGP_CAROLIEiJ_G0023026) #19	Ldb1 (MGP_CAROLIEiJ_G0023025) #20	Hps6 (MGP_CAROLIEiJ_G0023024) #21	Armh3 (MGP_CAROLIEiJ_G0023023) #22	Kcnip2 (MGP_CAROLIEiJ_G0023022) #23	Oga (MGP_CAROLIEiJ_G0023021) #24	Npm3 (MGP_CAROLIEiJ_G0023020) #25	Fgf8 (MGP_CAROLIEiJ_G0023019) #26	Fbxw4 (MGP_CAROLIEiJ_G0023018) #27	Dpcd (MGP_CAROLIEiJ_G0023017) #28	Poll (MGP_CAROLIEiJ_G0023016) #29	Btrc (MGP_CAROLIEiJ_G0023015) #30	Lbx1 (MGP_CAROLIEiJ_G0023014) #32	Tlx1 (MGP_CAROLIEiJ_G0023013) #33	Kazald1 (MGP_CAROLIEiJ_G0023012) #34	Sfxn3 (MGP_CAROLIEiJ_G0023011) #35	Pdzd7 (MGP_CAROLIEiJ_G0023010) #37	Lzts2 (MGP_CAROLIEiJ_G0023009)	Twnk (MGP_CAROLIEiJ_G0023008)
Shrew mouse	MODERN SPECIES		Trim8 (MGP_PahariEiJ_G0014528)	Sufu (MGP_PahariEiJ_G0014527)	Actr1a (MGP_PahariEiJ_G0014526)	Mfsd13a (MGP_PahariEiJ_G0014525)	Cuedc2 (MGP_PahariEiJ_G0014524)	Fbxl15 (MGP_PahariEiJ_G0014523)	Psd (MGP_PahariEiJ_G0014522)	Nfkb2 (MGP_PahariEiJ_G0014521)	Gbf1 (MGP_PahariEiJ_G0014520)	Pitx3 (MGP_PahariEiJ_G0014519)	Elovl3 (MGP_PahariEiJ_G0014518)	Nolc1 (MGP_PahariEiJ_G0014517) #18	Pprc1 (MGP_PahariEiJ_G0014516) #19	Ldb1 (MGP_PahariEiJ_G0014515) #20	Hps6 (MGP_PahariEiJ_G0014514) #21	Armh3 (MGP_PahariEiJ_G0014513) #22	Kcnip2 (MGP_PahariEiJ_G0014512) #23	Oga (MGP_PahariEiJ_G0014511) #24	Npm3 (MGP_PahariEiJ_G0014510) #25	Fgf8 (MGP_PahariEiJ_G0014509) #26	MGP_PahariEiJ_G0014508 #27	Dpcd (MGP_PahariEiJ_G0014507) #28	Poll (MGP_PahariEiJ_G0014506) #29	Btrc (MGP_PahariEiJ_G0014505) #30	Lbx1 (MGP_PahariEiJ_G0014504) #32	Tlx1 (MGP_PahariEiJ_G0014503) #33	Kazald1 (MGP_PahariEiJ_G0014502) #34	Sfxn3 (MGP_PahariEiJ_G0014501) #35	Pdzd7 (MGP_PahariEiJ_G0014500) #37	MGP_PahariEiJ_G0014499	Twnk (MGP_PahariEiJ_G0014498)
Rat	MODERN SPECIES		Sufu (ENSRNOG00000019807)	Actr1a (ENSRNOG00000019725)	Mfsd13a (ENSRNOG00000019674)	C1H10orf95 (ENSRNOG00000066499)	Cuedc2 (ENSRNOG00000019574)	Fbxl15 (ENSRNOG00000019509)	Psd (ENSRNOG00000019435)	Nfkb2 (ENSRNOG00000019311)	Gbf1 (ENSRNOG00000026048)	Pitx3 (ENSRNOG00000019194)	Elovl3 (ENSRNOG00000019124)	Nolc1 (ENSRNOG00000018704) #18	Pprc1 (ENSRNOG00000018561) #19	Ldb1 (ENSRNOG00000018468) #20	Hps6 (ENSRNOG00000018433) #21	Armh3 (ENSRNOG00000025523) #22	Kcnip2 (ENSRNOG00000018018) #23	Oga (ENSRNOG00000017822) #24	Npm3 (ENSRNOG00000017622) #25	Fgf8 (ENSRNOG00000017524) #26	Fbxw4 (ENSRNOG00000046211) #27	Dpcd (ENSRNOG00000017241) #28	Poll (ENSRNOG00000016748) #29	Btrc (ENSRNOG00000016280) #30	Lbx1 (ENSRNOG00000025520) #32	Tlx1 (ENSRNOG00000016120) #33	Kazald1 (ENSRNOG00000016058) #34	Sfxn3 (ENSRNOG00000015442) #35	Pdzd7 (ENSRNOG00000032946) #37	Lzts2 (ENSRNOG00000014969)	Twnk (ENSRNOG00000014935)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1300	Sufu (ENSNGAG00000022855)	Actr1a (ENSNGAG00000012852)	Mfsd13a (ENSNGAG00000010719)	Cuedc2 (ENSNGAG00000021332)	Fbxl15 (ENSNGAG00000011400)	Psd (ENSNGAG00000011541)	Nfkb2 (ENSNGAG00000022988)	Gbf1 (ENSNGAG00000006095)	Pitx3 (ENSNGAG00000021500)	Elovl3 (ENSNGAG00000013825)	Nolc1 (ENSNGAG00000024139) #18	Pprc1 (ENSNGAG00000016516) #19	Ldb1 (ENSNGAG00000024157) #20	ENSNGAG00000021169	Hps6 (ENSNGAG00000012214) #21	Armh3 (ENSNGAG00000023147) #22	Kcnip2 (ENSNGAG00000024132) #23	Oga (ENSNGAG00000011804) #24	ENSNGAG00000022833 #25	Fgf8 (ENSNGAG00000018999) #26	Fbxw4 (ENSNGAG00000022749) #27	Dpcd (ENSNGAG00000015959) #28	Poll (ENSNGAG00000021402) #29	Btrc (ENSNGAG00000001803) #30	ENSNGAG00000023625	Lbx1 (ENSNGAG00000023979) #32	Tlx1 (ENSNGAG00000024255) #33	Kazald1 (ENSNGAG00000011414) #34	Sfxn3 (ENSNGAG00000017442) #35	ENSNGAG00000004602 #37	Lzts2 (ENSNGAG00000023942)
Lesser Egyptian jerboa	MODERN SPECIES	70	Mfsd13a (ENSJJAG00000019354)	Cuedc2 (ENSJJAG00000019898)	Fbxl15 (ENSJJAG00000018833)	Psd (ENSJJAG00000020932)	Nfkb2 (ENSJJAG00000011519)	ENSJJAG00000018772	ENSJJAG00000010788	ENSJJAG00000023637	Pitx3 (ENSJJAG00000020721)	Elovl3 (ENSJJAG00000020437)	Nolc1 (ENSJJAG00000021131) #18	ENSJJAG00000005177 #19	ENSJJAG00000024088 #19	Ldb1 (ENSJJAG00000012307) #20	Hps6 (ENSJJAG00000011662) #21	Armh3 (ENSJJAG00000018861) #22	Kcnip2 (ENSJJAG00000019358) #23	Oga (ENSJJAG00000020565) #24	Npm3 (ENSJJAG00000018907) #25	Fgf8 (ENSJJAG00000014440) #26	ENSJJAG00000016263 #27	Dpcd (ENSJJAG00000010119) #28	Poll (ENSJJAG00000024104) #29	Btrc (ENSJJAG00000011813) #30	Lbx1 (ENSJJAG00000021756) #32	ENSJJAG00000006430 #33	Kazald1 (ENSJJAG00000021687) #34	Sfxn3 (ENSJJAG00000016145) #35	ENSJJAG00000014285 #37	Lzts2 (ENSJJAG00000015056)	ENSJJAG00000006388
Kangaroo rat	MODERN SPECIES	355	Actr1a (ENSDORG00000027112)	Mfsd13a (ENSDORG00000013635)	Cuedc2 (ENSDORG00000013412)	Fbxl15 (ENSDORG00000013411)	Psd (ENSDORG00000013410)	Nfkb2 (ENSDORG00000013409)	ENSDORG00000013406	ENSDORG00000024842	Pitx3 (ENSDORG00000023993)	Elovl3 (ENSDORG00000027255)	Nolc1 (ENSDORG00000001056) #18	Pprc1 (ENSDORG00000001046) #19	Ldb1 (ENSDORG00000003498) #20	Hps6 (ENSDORG00000028123) #21	ENSDORG00000023337	Armh3 (ENSDORG00000003496) #22	Kcnip2 (ENSDORG00000003495) #23	Oga (ENSDORG00000003493) #24	Npm3 (ENSDORG00000003491) #25	Fgf8 (ENSDORG00000029227) #26	Fbxw4 (ENSDORG00000014212) #27	Dpcd (ENSDORG00000014209) #28	Poll (ENSDORG00000024173) #29	Btrc (ENSDORG00000014204) #30	Lbx1 (ENSDORG00000029567) #32	ENSDORG00000025952 #33	Kazald1 (ENSDORG00000016417) #34	Sfxn3 (ENSDORG00000016415) #35	ENSDORG00000016413 #37	Lzts2 (ENSDORG00000016411)	Twnk (ENSDORG00000004461)
Lagomorpha	ANCESTRAL SPECIES	17	ENSGT00390000009747	ENSGT00940000155782	ENSGT00940000160317	ENSGT00940000166473	ENSGT00500000045093	ENSGT00390000014513	ENSGT00940000160250	ENSGT00940000155061.a.b	ENSGT00940000160968	ENSGT00940000156925	ENSGT00940000161801	ENSGT01050000244965.a	ENSGT00730000111092.a.a ##18	ENSGT00950000183137.a #19	ENSGT00390000005639.a.b #20	ENSGT00390000002554 #22	ENSGT00940000157798 #23	ENSGT00390000007726.a.a #24	ENSGT00940000158796 #25	ENSGT00940000159518 #26	ENSGT00390000005029 #27	ENSGT00390000014031 #28	ENSGT00940000158515 #29	ENSGT00940000159672 #30	ENSGT00940000161756 #32	ENSGT00940000158698 #33	ENSGT00530000063555.B #34	ENSGT01030000234641.b.a.b.a.a #35	ENSGT00950000183002.C #37	ENSGT00940000154078.a.a	ENSGT00390000004495
Pika	MODERN SPECIES	102											PITX3 (ENSOPRG00000009418)	ELOVL3 (ENSOPRG00000009404)	NOLC1 (ENSOPRG00000009381) ##18	PPRC1 (ENSOPRG00000009346) #19	LDB1 (ENSOPRG00000009325) #20	ARMH3 (ENSOPRG00000009274) #22	OGA (ENSOPRG00000009241) #24	NPM3 (ENSOPRG00000009229) #25
Rabbit	MODERN SPECIES	9	ARL3 (ENSOCUG00000005792)	TRIM8 (ENSOCUG00000005786)	SUFU (ENSOCUG00000005781)	ACTR1A (ENSOCUG00000005779)	MFSD13A (ENSOCUG00000005770)	FBXL15 (ENSOCUG00000005764)	CUEDC2 (ENSOCUG00000023995)	PSD (ENSOCUG00000005751)	NFKB2 (ENSOCUG00000005735)	GBF1 (ENSOCUG00000005714)	PITX3 (ENSOCUG00000016065)	ELOVL3 (ENSOCUG00000016071)	ENSOCUG00000000516 ##18	PPRC1 (ENSOCUG00000000510) #19	LDB1 (ENSOCUG00000025582) #20	ARMH3 (ENSOCUG00000002776) #22	KCNIP2 (ENSOCUG00000026348) #23	OGA (ENSOCUG00000002768) #24	NPM3 (ENSOCUG00000016819) #25	ENSOCUG00000027864 #26	FBXW4 (ENSOCUG00000015386) #27	DPCD (ENSOCUG00000015373) #28	POLL (ENSOCUG00000015364) #29	BTRC (ENSOCUG00000015353) #30	LBX1 (ENSOCUG00000013145) #32	TLX1 (ENSOCUG00000013136) #33	KAZALD1 (ENSOCUG00000002974) #34	SFXN3 (ENSOCUG00000002751) #35	ENSOCUG00000031924 #37	ENSOCUG00000006651 #37	LZTS2 (ENSOCUG00000021502)