Gnathostomata	ANCESTRAL SPECIES	1248															ENSGT00390000006208.a	ENSGT00390000017214 #22
Euteleostomi	ANCESTRAL SPECIES	369												ENSGT00940000160014	ENSGT00940000157317	ENSGT00390000006208.a	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00940000176149	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000165416
Sarcopterygii	ANCESTRAL SPECIES	35															ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00940000176149	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000165416	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339	ENSGT00390000008983.b	ENSGT00940000162897
Tetrapoda	ANCESTRAL SPECIES	409															ENSGT00390000009061 #21	ENSGT00390000017214 #22
Amniota	ANCESTRAL SPECIES		ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT00940000167196	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000153259.a.a.a	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36
Mammalia	ANCESTRAL SPECIES	7	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT00940000167196	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000164076.a.b	ENSGT00940000161675	ENSGT00390000009776	ENSGT01030000234590.A.a.b #25	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015
Theria	ANCESTRAL SPECIES	15	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT00940000167196	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B	ENSGT00950000183168.A
Eutheria	ANCESTRAL SPECIES	3	ENSGT00950000185226	ENSGT00940000167196	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000160005.A #8	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000163440	ENSGT00940000162409	ENSGT00940000160005.A #8	ENSGT00940000163778	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000162409	ENSGT00940000160005.A #8	ENSGT00940000163778	ENSGT00940000163440	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000162409	ENSGT00940000160005.B #9	ENSGT00940000160005.A #8	ENSGT00940000163778	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000162409	ENSGT00940000160005.A #8	ENSGT00940000160005.B #9	ENSGT00940000163778	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Laurasiatheria_c	ANCESTRAL SPECIES	9	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000162409	ENSGT00940000163858 #7	ENSGT00940000163440	ENSGT00940000160005.A #8	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT01030000234590.A.a.b #25	ENSGT00940000155511	ENSGT00950000183380	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00510000050180
Equus	ANCESTRAL SPECIES	15	ENSGT00940000162409	ENSGT00940000163440	ENSGT00940000163858 #7	ENSGT00940000160005.A #8	ENSGT00940000160005.B #9	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT01030000234590.A.a.b #25	ENSGT00940000155511	ENSGT00950000183380	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00510000050180
Donkey	MODERN SPECIES	12	ENSEASG00005035530 #7	ENSEASG00005012599 #8	ENSEASG00005012578 #9	ENSEASG00005012565 #10	ENSEASG00005012508 #11	ENSEASG00005034965 #12	ENSEASG00005012468 #13	FAT3 (ENSEASG00005012460) #14	ENSEASG00005012365 #15	MTNR1B (ENSEASG00005012345) #16	SLC36A4 (ENSEASG00005012341) #17	DEUP1 (ENSEASG00005012331) #18	SMCO4 (ENSEASG00005012324) #19	CEP295 (ENSEASG00005012313) #20	TAF1D (ENSEASG00005012293) #21	C11orf54 (ENSEASG00005012286) #22	MED17 (ENSEASG00005012254) #23	VSTM5 (ENSEASG00005012241) #24	ENSEASG00005012238 #25	HEPHL1 (ENSEASG00005012218) #26	PANX1 (ENSEASG00005012200) #27	IZUMO1R (ENSEASG00005035464) #28	GPR83 (ENSEASG00005012119) #29	MRE11 (ENSEASG00005011342) #30	ANKRD49 (ENSEASG00005032651) #31	C11orf97 (ENSEASG00005011314) #32	FUT4 (ENSEASG00005011312) #33	PIWIL4 (ENSEASG00005027983) #34	AMOTL1 (ENSEASG00005011287) #35	CWC15 (ENSEASG00005011279) #36	ENSEASG00005028515 #37
Horse	MODERN SPECIES	28	ENSECAG00000028200 #7	ENSECAG00000044730 #8	ENSECAG00000040279 #8	ENSECAG00000021692 #8	ENSECAG00000019401 #9	CHORDC1 (ENSECAG00000008999) #12	ENSECAG00000049990	ENSECAG00000005999	FAT3 (ENSECAG00000001988) #14	ENSECAG00000022260 #15	MTNR1B (ENSECAG00000022198) #16	SLC36A4 (ENSECAG00000021237) #17	DEUP1 (ENSECAG00000020231) #18	CEP295 (ENSECAG00000018114) #20	TAF1D (ENSECAG00000017850) #21	C7H11orf54 (ENSECAG00000015110) #22	MED17 (ENSECAG00000011329) #23	VSTM5 (ENSECAG00000011305) #24	ENSECAG00000011283 #25	HEPHL1 (ENSECAG00000008947) #26	PANX1 (ENSECAG00000007780) #27	IZUMO1R (ENSECAG00000007254) #28	ENSECAG00000052866	MARCHF2 (ENSECAG00000025028)	HNRNPM (ENSECAG00000023868)	PRAM1 (ENSECAG00000023478)	ZNF414 (ENSECAG00000023401)	MYO1F (ENSECAG00000016782)	ADAMTS10 (ENSECAG00000016210)	NFILZ (ENSECAG00000053206)	ENSECAG00000005142
Chiroptera	ANCESTRAL SPECIES	5	ENSGT00940000162409	ENSGT00940000160005.A #8	ENSGT00940000163440	ENSGT00940000163858 #7	ENSGT00940000163778	ENSGT00940000160005.B #9	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT01030000234590.A.a.b #25	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00510000050180	ENSGT00940000155124
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000162409	ENSGT00940000163858 #7	ENSGT00940000163440	ENSGT00940000160005.A #8	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00390000002414.ob	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT01030000234590.A.a.b #25	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00510000050180	ENSGT00940000155124
Greater horseshoe bat	MODERN SPECIES	2	ENSRFEG00010017954	ENSRFEG00010018032 #7	TRIM77 (ENSRFEG00010018089)	ENSRFEG00010018158 #9	ENSRFEG00010018488 #8	NAALAD2 (ENSRFEG00010018581) #11	ENSRFEG00010018698 #12	ENSRFEG00010018842	FAT3 (ENSRFEG00010018861) #14	MTNR1B (ENSRFEG00010018917) #16	SLC36A4 (ENSRFEG00010018971) #17	DEUP1 (ENSRFEG00010019047) #18	ENSRFEG00010019320 #19	CEP295 (ENSRFEG00010019371) #20	TAF1D (ENSRFEG00010019531) #21	C11orf54 (ENSRFEG00010019588) #22	MED17 (ENSRFEG00010019676) #23	VSTM5 (ENSRFEG00010019719) #24	ENSRFEG00010019751 #25	HEPHL1 (ENSRFEG00010019856) #26	PANX1 (ENSRFEG00010020003) #27	IZUMO1R (ENSRFEG00010020055) #28	GPR83 (ENSRFEG00010020113) #29	MRE11 (ENSRFEG00010020173) #30	ANKRD49 (ENSRFEG00010020343) #31	C11orf97 (ENSRFEG00010020369) #32	FUT4 (ENSRFEG00010020392) #33	PIWIL4 (ENSRFEG00010020425) #34	AMOTL1 (ENSRFEG00010020674) #35	CWC15 (ENSRFEG00010020742) #36	ENSRFEG00010020755 #37
Microbat	MODERN SPECIES	1041					ENSMLUG00000025560	ENSMLUG00000025510	FAT3 (ENSMLUG00000015758) #14	MTNR1B (ENSMLUG00000011618) #16	ENSMLUG00000001084	SLC36A4 (ENSMLUG00000005983) #17	ENSMLUG00000030695	DEUP1 (ENSMLUG00000015504) #18	SMCO4 (ENSMLUG00000006975) #19	CEP295 (ENSMLUG00000011383) #20	ENSMLUG00000011431 #21	C11orf54 (ENSMLUG00000011443) #22	MED17 (ENSMLUG00000011467) #23	VSTM5 (ENSMLUG00000029725) #24	ENSMLUG00000022473 #25	HEPHL1 (ENSMLUG00000008248) #26	PANX1 (ENSMLUG00000000460) #27	IZUMO1R (ENSMLUG00000000463) #28	GPR83 (ENSMLUG00000016975) #29	MRE11 (ENSMLUG00000002006) #30	ANKRD49 (ENSMLUG00000002017) #31	C11orf97 (ENSMLUG00000025421) #32	PIWIL4 (ENSMLUG00000002018) #34	AMOTL1 (ENSMLUG00000002026) #35	ENSMLUG00000002032 #36	ENSMLUG00000028321 #37	ENSMLUG00000025372
Megabat	MODERN SPECIES	1959													DEUP1 (ENSPVAG00000005507) #18	ENSPVAG00000005513 #20	TAF1D (ENSPVAG00000005521) #21	C11orf54 (ENSPVAG00000005522) #22
Carnivora	ANCESTRAL SPECIES	21	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000162409	ENSGT00940000160005.B #9	ENSGT00940000163778	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Caniformia	ANCESTRAL SPECIES	17	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823.a #32	ENSGT00910000147289	ENSGT00520000058823.b #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36
Canidae	ANCESTRAL SPECIES	17	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000162409	ENSGT00940000160005.B.g #9	ENSGT00940000163778	ENSGT00940000160005.B.h #9	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00950000183152.A.w.a	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a.h #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061.i.a #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00910000147289	ENSGT00520000058823.b #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Canis_lupus	ANCESTRAL SPECIES	21	ENSGT00940000162409	ENSGT00940000160005.B.g #9	ENSGT00940000163778	ENSGT00940000160005.B.h #9	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00950000183152.A.w.a	ENSGT00940000153314.a.b.a	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a.h #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061.i.a #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00910000147289	ENSGT00520000058823.b #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152.y #37
Dog	MODERN SPECIES	13	TRIM77 (ENSCAFG00845024925)	ENSCAFG00845024803 #9	NAALAD2 (ENSCAFG00845024559) #11	CHORDC1 (ENSCAFG00845024317) #12	ENSCAFG00845024138	ENSCAFG00845023968	ENSCAFG00845023937	ENSCAFG00845023311 #14	MTNR1B (ENSCAFG00845023202) #16	SLC36A4 (ENSCAFG00845023100) #17	ENSCAFG00845022822	SMCO4 (ENSCAFG00845022789) #19	DEUP1 (ENSCAFG00845022176) #18	CEP295 (ENSCAFG00845021425) #20	ENSCAFG00845021166 #21	C11orf54 (ENSCAFG00845020928) #22	MED17 (ENSCAFG00845020829) #23	ENSCAFG00845020781 #24	HEPHL1 (ENSCAFG00845020630) #26	PANX1 (ENSCAFG00845020558) #27	IZUMO1R (ENSCAFG00845020509) #28	GPR83 (ENSCAFG00845020430) #29	MRE11 (ENSCAFG00845020248) #30	ANKRD49 (ENSCAFG00845020201) #31	ENSCAFG00845020169	ENSCAFG00845020114 #32	FUT4 (ENSCAFG00845020086) #33	PIWIL4 (ENSCAFG00845019963) #34	AMOTL1 (ENSCAFG00845019406) #35	CWC15 (ENSCAFG00845019309) #36	ENSCAFG00845019286 #37
Dingo	MODERN SPECIES	245	TRIM77 (ENSCAFG00020016740)	ENSCAFG00020016712 #9	NAALAD2 (ENSCAFG00020016699) #11	CHORDC1 (ENSCAFG00020016695) #12	ENSCAFG00020016685	ENSCAFG00020016674	ENSCAFG00020016670	ENSCAFG00020016668	FAT3 (ENSCAFG00020016652) #14	MTNR1B (ENSCAFG00020016646) #16	SLC36A4 (ENSCAFG00020016637) #17	ENSCAFG00020016631 #18	ENSCAFG00020016621 #18	SMCO4 (ENSCAFG00020016620) #19	CEP295 (ENSCAFG00020016598) #20	C11orf54 (ENSCAFG00020016576) #22	MED17 (ENSCAFG00020016574) #23	VSTM5 (ENSCAFG00020016572) #24	HEPHL1 (ENSCAFG00020016564) #26	PANX1 (ENSCAFG00020016561) #27	IZUMO1R (ENSCAFG00020016546) #28	GPR83 (ENSCAFG00020016538) #29	MRE11 (ENSCAFG00020016532) #30	ENSCAFG00020016530	ANKRD49 (ENSCAFG00020016528) #31	FUT4 (ENSCAFG00020016526) #33	PIWIL4 (ENSCAFG00020016521) #34	AMOTL1 (ENSCAFG00020016518) #35	CWC15 (ENSCAFG00020016515) #36	ENSCAFG00020016513 #37	ENSCAFG00020016510 #37
Red fox	MODERN SPECIES	12	FOLH1 (ENSVVUG00000009321) ##11	ENSVVUG00000009346	ENSVVUG00000009370 #9	TRIM77 (ENSVVUG00000009448)	ENSVVUG00000009492 #9	NAALAD2 (ENSVVUG00000009504) #11	CHORDC1 (ENSVVUG00000009574) #12	ENSVVUG00000009594	ENSVVUG00000009615	ENSVVUG00000009648	ENSVVUG00000009657	FAT3 (ENSVVUG00000009801) #14	SLC36A4 (ENSVVUG00000011262) #17	DEUP1 (ENSVVUG00000011271) #18	CEP295 (ENSVVUG00000011351) #20	CUNH11orf54 (ENSVVUG00000011455) #22	MED17 (ENSVVUG00000011459) #23	VSTM5 (ENSVVUG00000011473) #24	ENSVVUG00000011475 #25	HEPHL1 (ENSVVUG00000011481) #26	PANX1 (ENSVVUG00000011503) #27	ENSVVUG00000011513 #28	GPR83 (ENSVVUG00000011530) #29	MRE11 (ENSVVUG00000011537) #30	ANKRD49 (ENSVVUG00000011561) #31	ENSVVUG00000011564	ENSVVUG00000011567 #32	FUT4 (ENSVVUG00000011573) #33	PIWIL4 (ENSVVUG00000011577) #34	AMOTL1 (ENSVVUG00000011602) #35	ENSVVUG00000011644
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823.a #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Ursidae	ANCESTRAL SPECIES	15	ENSGT00390000000303	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b.m #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823.a #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152.u #37	ENSGT01030000234592.B
Ursus	ANCESTRAL SPECIES	157								ENSGT01030000234598.b.a.b.k.b.m #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152.u.a.a #37	ENSGT00940000162152.u.b #37	ENSGT01030000234592.B
American black bear	MODERN SPECIES	1111												DEUP1 (ENSUAMG00000000299) #18	SMCO4 (ENSUAMG00000000286) #19	CEP295 (ENSUAMG00000000077) #20	TAF1D (ENSUAMG00000026880) #21	C11orf54 (ENSUAMG00000026879) #22	MED17 (ENSUAMG00000026834) #23	VSTM5 (ENSUAMG00000026829) #24
Polar bear	MODERN SPECIES	149	VPS26B (ENSUMAG00000006148)	THYN1 (ENSUMAG00000006152)	ACAD8 (ENSUMAG00000006162)	ENSUMAG00000006196	GLB1L3 (ENSUMAG00000006221)	GLB1L2 (ENSUMAG00000006270)	B3GAT1 (ENSUMAG00000006581)	NAALAD2 (ENSUMAG00000006599) #11	CHORDC1 (ENSUMAG00000006613) #12	FAT3 (ENSUMAG00000006731) #14	SLC36A4 (ENSUMAG00000006788) #17	DEUP1 (ENSUMAG00000006791) #18	SMCO4 (ENSUMAG00000006807) #19	CEP295 (ENSUMAG00000006832) #20	TAF1D (ENSUMAG00000006891) #21	C11orf54 (ENSUMAG00000006893) #22	MED17 (ENSUMAG00000006899) #23	VSTM5 (ENSUMAG00000006903) #24	HEPHL1 (ENSUMAG00000006908) #26	PANX1 (ENSUMAG00000006930) #27	IZUMO1R (ENSUMAG00000006944) #28	GPR83 (ENSUMAG00000007059) #29	MRE11 (ENSUMAG00000007075) #30	ANKRD49 (ENSUMAG00000007092) #31	PIWIL4 (ENSUMAG00000007117) #34	AMOTL1 (ENSUMAG00000007154) #35	CWC15 (ENSUMAG00000007161) #36	ENSUMAG00000007170 #37	ENSUMAG00000007175 #37	ENDOD1 (ENSUMAG00000007178)	SESN3 (ENSUMAG00000007186)
Giant Panda	MODERN SPECIES	18	RAB38 (ENSAMEG00000015103)	CTSC (ENSAMEG00000015113)	GRM5 (ENSAMEG00000024209)	TYR (ENSAMEG00000005958)	NOX4 (ENSAMEG00000005207)	ENSAMEG00000005259 ##11	ENSAMEG00000007477 #11	ENSAMEG00000007577 #12	ENSAMEG00000028153 #12	FAT3 (ENSAMEG00000004298) #14	SLC36A4 (ENSAMEG00000015861) #17	DEUP1 (ENSAMEG00000015849) #18	SMCO4 (ENSAMEG00000020097) #19	CEP295 (ENSAMEG00000012848) #20	TAF1D (ENSAMEG00000012858) #21	C11orf54 (ENSAMEG00000012862) #22	MED17 (ENSAMEG00000012892) #23	VSTM5 (ENSAMEG00000023824) #24	HEPHL1 (ENSAMEG00000012916) #26	PANX1 (ENSAMEG00000011923) #27	IZUMO1R (ENSAMEG00000011928) #28	GPR83 (ENSAMEG00000007680) #29	MRE11 (ENSAMEG00000007626) #30	ANKRD49 (ENSAMEG00000028517) #31	C11orf97 (ENSAMEG00000024321) #32	FUT4 (ENSAMEG00000007616) #33	PIWIL4 (ENSAMEG00000007580) #34	ENSAMEG00000001911	AMOTL1 (ENSAMEG00000011381) #35	CWC15 (ENSAMEG00000011392) #36	ENSAMEG00000025796 #37
Mustelinae	ANCESTRAL SPECIES	25	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823.a #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
American mink	MODERN SPECIES	6	GRM5 (ENSNVIG00000004087)	ENSNVIG00000004099	ENSNVIG00000004112	TYR (ENSNVIG00000004130)	NOX4 (ENSNVIG00000004160)	FOLH1 (ENSNVIG00000004536) ##11	NAALAD2 (ENSNVIG00000004661) #11	CHRD1 (ENSNVIG00000004738) #12	FAT3 (ENSNVIG00000004831) #14	MTNR1B (ENSNVIG00000004926) #16	SLC36A4 (ENSNVIG00000004976) #17	DEUP1 (ENSNVIG00000005001) #18	ENSNVIG00000005094 #19	CEP295 (ENSNVIG00000005105) #20	TAF1D (ENSNVIG00000005172) #21	C11orf54 (ENSNVIG00000005179) #22	MED17 (ENSNVIG00000005216) #23	VSTM5 (ENSNVIG00000005272) #24	HEPHL1 (ENSNVIG00000005290) #26	PANX1 (ENSNVIG00000005347) #27	FOLR4 (ENSNVIG00000005363) #28	GPR83 (ENSNVIG00000005397) #29	MRE11 (ENSNVIG00000005415) #30	ANKRD49 (ENSNVIG00000005521) #31	C11orf97 (ENSNVIG00000005537) #32	FUT4 (ENSNVIG00000005553) #33	PIWIL4 (ENSNVIG00000005560) #34	AMOTL1 (ENSNVIG00000005602) #35	CWC15 (ENSNVIG00000005664) #36	ENSNVIG00000005671 #37	ENSNVIG00000005674 #37
Ferret	MODERN SPECIES	259	TYR (ENSMPUG00000010381)	NOX4 (ENSMPUG00000010385)	FOLH1 (ENSMPUG00000010390) ##11	NAALAD2 (ENSMPUG00000010401) #11	CHORDC1 (ENSMPUG00000010548) #12	ENSMPUG00000018689	ENSMPUG00000018690	FAT3 (ENSMPUG00000010556) #14	ENSMPUG00000010572	ENSMPUG00000010574	SLC36A4 (ENSMPUG00000010579) #17	ENSMPUG00000010589 #18	ENSMPUG00000010626	CEP295 (ENSMPUG00000010628) #20	TAF1D (ENSMPUG00000010659) #21	C11orf54 (ENSMPUG00000010663) #22	MED17 (ENSMPUG00000010667) #23	VSTM5 (ENSMPUG00000010671) #24	ENSMPUG00000018691
Felidae	ANCESTRAL SPECIES		ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000162409	ENSGT00940000160005.B #9	ENSGT00940000163778	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152.s #37	ENSGT00940000162152.t #37
Panthera	ANCESTRAL SPECIES	23	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000162409	ENSGT00940000160005.B #9	ENSGT00940000163778	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084.y.b #36	ENSGT00940000162152.s #37	ENSGT01030000234592.B
Panthera_a	ANCESTRAL SPECIES	24	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000162409	ENSGT00940000160005.B #9	ENSGT00940000163778	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084.y.a.a #36	ENSGT00940000162152.s.a #37	ENSGT01030000234592.B
lion	MODERN SPECIES	10	ENSPLOG00000015181	ENSPLOG00000014641 #9	TRIM77 (ENSPLOG00000014478)	ENSPLOG00000014439 #7	NAALAD2 (ENSPLOG00000014022) #11	CHORDC1 (ENSPLOG00000013727) #12	FAT3 (ENSPLOG00000013276) #14	ENSPLOG00000013143 #15	MTNR1B (ENSPLOG00000013104) #16	ENSPLOG00000013078	SLC36A4 (ENSPLOG00000012924) #17	DEUP1 (ENSPLOG00000012693) #18	SMCO4 (ENSPLOG00000012661) #19	CEP295 (ENSPLOG00000012597) #20	TAF1D (ENSPLOG00000012430) #21	C11orf54 (ENSPLOG00000012138) #22	MED17 (ENSPLOG00000012011) #23	VSTM5 (ENSPLOG00000011932) #24	ENSPLOG00000011835 #25	HEPHL1 (ENSPLOG00000011658) #26	PANX1 (ENSPLOG00000011611) #27	IZUMO1R (ENSPLOG00000011548) #28	GPR83 (ENSPLOG00000011474) #29	MRE11 (ENSPLOG00000011192) #30	ANKRD49 (ENSPLOG00000011102) #31	C11orf97 (ENSPLOG00000011026) #32	FUT4 (ENSPLOG00000010997) #33	PIWIL4 (ENSPLOG00000018141) #34	AMOTL1 (ENSPLOG00000017940) #35	ENSPLOG00000017871 #36	KDM4D (ENSPLOG00000017815) #37
leopard	MODERN SPECIES	17	FOLH1 (ENSPPRG00000017997) ##11	ENSPPRG00000013571	TRIM77 (ENSPPRG00000012936)	UBTFL1 (ENSPPRG00000015347) #7	NAALAD2 (ENSPPRG00000012456) #11	CHORDC1 (ENSPPRG00000009494) #12	ENSPPRG00000008409	FAT3 (ENSPPRG00000007707) #14	ENSPPRG00000005678 #15	MTNR1B (ENSPPRG00000004216) #16	SLC36A4 (ENSPPRG00000004146) #17	DEUP1 (ENSPPRG00000003992) #18	SMCO4 (ENSPPRG00000015134) #19	CEP295 (ENSPPRG00000002239) #20	TAF1D (ENSPPRG00000000132) #21	C11orf54 (ENSPPRG00000022726) #22	MED17 (ENSPPRG00000014853) #23	VSTM5 (ENSPPRG00000012542) #24	HEPHL1 (ENSPPRG00000012328) #26	PANX1 (ENSPPRG00000012085) #27	IZUMO1R (ENSPPRG00000011844) #28	GPR83 (ENSPPRG00000011279) #29	MRE11 (ENSPPRG00000010728) #30	ANKRD49 (ENSPPRG00000008157) #31	C11orf97 (ENSPPRG00000007748) #32	FUT4 (ENSPPRG00000014970) #33	PIWIL4 (ENSPPRG00000007432) #34	AMOTL1 (ENSPPRG00000007186) #35	ENSPPRG00000005063 #36	ENSPPRG00000014918 #37	ENSPPRG00000014906 #37
Tiger	MODERN SPECIES	123	ENSPTIG00000017086	ENSPTIG00000017277	TRIM77 (ENSPTIG00000017304)	UBTFL1 (ENSPTIG00000009976) #7	NAALAD2 (ENSPTIG00000017405) #11	CHORDC1 (ENSPTIG00000017806) #12	ENSPTIG00000017905	ENSPTIG00000018013 #14	ENSPTIG00000018103 #14	MTNR1B (ENSPTIG00000018222) #16	SLC36A4 (ENSPTIG00000018252) #17	DEUP1 (ENSPTIG00000018347) #18	SMCO4 (ENSPTIG00000010019) #19	CEP295 (ENSPTIG00000018669) #20	TAF1D (ENSPTIG00000019674) #21	C11orf54 (ENSPTIG00000019745) #22	MED17 (ENSPTIG00000019841) #23	VSTM5 (ENSPTIG00000020099) #24	HEPHL1 (ENSPTIG00000020126) #26	PANX1 (ENSPTIG00000020245) #27	IZUMO1R (ENSPTIG00000020317) #28	GPR83 (ENSPTIG00000020384) #29	MRE11 (ENSPTIG00000020482) #30	ANKRD49 (ENSPTIG00000020842) #31	C11orf97 (ENSPTIG00000020857) #32	PIWIL4 (ENSPTIG00000020931) #34	AMOTL1 (ENSPTIG00000021027) #35	ENSPTIG00000021149 #36	KDM4D (ENSPTIG00000021192) #37	ENDOD1 (ENSPTIG00000021253)	SESN3 (ENSPTIG00000000066)
Cat	MODERN SPECIES	241	FOLH1 (ENSFCAG00000007740) ##11	ENSFCAG00000008521	ENSFCAG00000043585 #9	ENSFCAG00000018518	ENSFCAG00000049822 #9	ENSFCAG00000037392 #7	NAALAD2 (ENSFCAG00000025290) #11	CHORDC1 (ENSFCAG00000019389) #12	FAT3 (ENSFCAG00000022245) #14	ENSFCAG00000030530 #15	MTNR1B (ENSFCAG00000003193) #16	SLC36A4 (ENSFCAG00000029109) #17	DEUP1 (ENSFCAG00000006337) #18	CEP295 (ENSFCAG00000028136) #20	TAF1D (ENSFCAG00000012473) #21	CD1H11orf54 (ENSFCAG00000012474) #22	MED17 (ENSFCAG00000012475) #23	VSTM5 (ENSFCAG00000023848) #24	HEPHL1 (ENSFCAG00000014735) #26	PANX1 (ENSFCAG00000004470) #27	IZUMO1R (ENSFCAG00000003023) #28	GPR83 (ENSFCAG00000010910) #29	MRE11 (ENSFCAG00000025219) #30	ANKRD49 (ENSFCAG00000042246) #31	CD1H11orf97 (ENSFCAG00000036846) #32	FUT4 (ENSFCAG00000029438) #33	PIWIL4 (ENSFCAG00000010914) #34	AMOTL1 (ENSFCAG00000010915) #35	CWC15 (ENSFCAG00000007826) #36	ENSFCAG00000045743 #37	ENSFCAG00000043892 #37
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00940000160005.A #8	ENSGT00940000162409	ENSGT00940000160005.B #9	ENSGT00940000163858 #7	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Suina	ANCESTRAL SPECIES	5	ENSGT00940000162409	ENSGT00940000163440	ENSGT00940000160005.B #9	ENSGT00940000163858 #7	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Pig	MODERN SPECIES	17	ENSSSCG00000014930	ENSSSCG00000049020 #9	ENSSSCG00000014929 #7	TRIM77 (ENSSSCG00000024966)	NAALAD2 (ENSSSCG00000014933) #11	ENSSSCG00000061267	CHORDC1 (ENSSSCG00000014934) #12	ENSSSCG00000014935 #14	ENSSSCG00000034113 #15	MTNR1B (ENSSSCG00000014939) #16	SLC36A4 (ENSSSCG00000024933) #17	DEUP1 (ENSSSCG00000014943) #18	SMCO4 (ENSSSCG00000057259) #19	CEP295 (ENSSSCG00000014946) #20	TAF1D (ENSSSCG00000038682) #21	C11orf54 (ENSSSCG00000014948) #22	MED17 (ENSSSCG00000014949) #23	VSTM5 (ENSSSCG00000014950) #24	ENSSSCG00000041237 #25	HEPHL1 (ENSSSCG00000030461) #26	PANX1 (ENSSSCG00000032360) #27	IZUMO1R (ENSSSCG00000014952) #28	GPR83 (ENSSSCG00000022490) #29	MRE11 (ENSSSCG00000014955) #30	ANKRD49 (ENSSSCG00000014956) #31	C11orf97 (ENSSSCG00000014957) #32	ENSSSCG00000062029 #33	PIWIL4 (ENSSSCG00000014959) #34	AMOTL1 (ENSSSCG00000014960) #35	CWC15 (ENSSSCG00000014961) #36	ENSSSCG00000031376 #37
Chacoan peccary	MODERN SPECIES	30	FOLH1 (ENSCWAG00000003143) ##11	ENSCWAG00000003010 #8	ENSCWAG00000002978 #7	ENSCWAG00000002962	ENSCWAG00000002828 #9	TRIM77 (ENSCWAG00000002794)	NAALAD2 (ENSCWAG00000002648) #11	CHORDC1 (ENSCWAG00000002615) #12	FAT3 (ENSCWAG00000002509) #14	MTNR1B (ENSCWAG00000002467) #16	SLC36A4 (ENSCWAG00000002448) #17	DEUP1 (ENSCWAG00000002415) #18	ENSCWAG00000002405 #19	CEP295 (ENSCWAG00000002365) #20	TAF1D (ENSCWAG00000002303) #21	C11orf54 (ENSCWAG00000002241) #22	MED17 (ENSCWAG00000002193) #23	VSTM5 (ENSCWAG00000002173) #24	HEPHL1 (ENSCWAG00000002145) #26	PANX1 (ENSCWAG00000002126) #27	IZUMO1R (ENSCWAG00000002109) #28	GPR83 (ENSCWAG00000002075) #29	NACA2 (ENSCWAG00000002065)	MRE11 (ENSCWAG00000002025) #30	ANKRD49 (ENSCWAG00000002004) #31	ENSCWAG00000001993 #32	ENSCWAG00000001987 #33	PIWIL4 (ENSCWAG00000001925) #34	AMOTL1 (ENSCWAG00000001874) #35	CWC15 (ENSCWAG00000001851) #36	ENSCWAG00000001839 #37
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00940000160005.A #8	ENSGT00940000162409	ENSGT00940000160005.B #9	ENSGT00940000163858 #7	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Camelidae	DUPLICATION
Camelidae	ANCESTRAL SPECIES	32	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000163440	ENSGT00940000160005.B #9	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214.o #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Arabian camel	MODERN SPECIES	1	NOX4 (ENSCDRG00005009765)	FOLH1 (ENSCDRG00005010235) ##11	ENSCDRG00005010410	ENSCDRG00005010499 #9	ENSCDRG00005011110	UBTFL1 (ENSCDRG00005011226) #7	NAALAD2 (ENSCDRG00005011284) #11	CHORDC1 (ENSCDRG00005011505) #12	FAT3 (ENSCDRG00005011626) #14	MTNR1B (ENSCDRG00005011909) #16	SLC36A4 (ENSCDRG00005011954) #17	DEUP1 (ENSCDRG00005012090) #18	ENSCDRG00005012157 #19	ENSCDRG00005012255 #20	TAF1D (ENSCDRG00005013529) #21	ENSCDRG00005013599 #22	MED17 (ENSCDRG00005014246) #23	VSTM5 (ENSCDRG00005014480) #24	ENSCDRG00005014573 #25	HEPHL1 (ENSCDRG00005014678) #26	PANX1 (ENSCDRG00005014832) #27	IZUMO1R (ENSCDRG00005014865) #28	GPR83 (ENSCDRG00005014899) #29	MRE11 (ENSCDRG00005014968) #30	ANKRD49 (ENSCDRG00005015366) #31	C11orf97 (ENSCDRG00005015394) #32	FUT4 (ENSCDRG00005015443) #33	PIWIL4 (ENSCDRG00005015533) #34	AMOTL1 (ENSCDRG00005015718) #35	CWC15 (ENSCDRG00005015943) #36	ENSCDRG00005015979 #37
Alpaca	MODERN SPECIES	1680														ENSVPAG00000009318 #20	TAF1D (ENSVPAG00000009321) #21	C11orf54 (ENSVPAG00000009322) #22	MED17 (ENSVPAG00000009324) #23	VSTM5 (ENSVPAG00000009326) #24	HEPHL1 (ENSVPAG00000009327) #26	PANX1 (ENSVPAG00000009330) #27
Camelidae	ANCESTRAL SPECIES																	ENSGT00390000017214.p #22
Arabian camel	MODERN SPECIES	11	ENSCDRG00005010708	ENSCDRG00005010544	MMRN1 (ENSCDRG00005010505)	CCSER1 (ENSCDRG00005010415)	ENSCDRG00005010381	GRID2 (ENSCDRG00005009950)	ENSCDRG00005009873	ATOH1 (ENSCDRG00005009854)	SMARCAD1 (ENSCDRG00005009588)	HPGDS (ENSCDRG00005009472)	PDLIM5 (ENSCDRG00005008970)	BMPR1B (ENSCDRG00005008805)	ENSCDRG00005008779	UNC5C (ENSCDRG00005008588)	PDHA2 (ENSCDRG00005008550)	ENSCDRG00005008544 #22	STPG2 (ENSCDRG00005008261)	RAP1GDS1 (ENSCDRG00005006817)	TSPAN5 (ENSCDRG00005006719)	ENSCDRG00005006550	METAP1 (ENSCDRG00005006507)	ADH5 (ENSCDRG00005006442)	ADH4 (ENSCDRG00005006348)	ADH6 (ENSCDRG00005006293)	ENSCDRG00005018374	ENSCDRG00005018280	ENSCDRG00005018187	C4orf17 (ENSCDRG00005018162)	TRMT10A (ENSCDRG00005018130)	MTTP (ENSCDRG00005018066)	C4orf54 (ENSCDRG00005018047)
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00940000160005.A #8	ENSGT00940000162409	ENSGT00940000160005.B #9	ENSGT00940000163858 #7	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Cetacea	DUPLICATION
Cetacea	DUPLICATION
Cetacea	ANCESTRAL SPECIES	4	ENSGT00940000169935	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000163440.g	ENSGT00940000162409	ENSGT00940000160005.A #8	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214.q.a #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152.n.a #37	ENSGT01030000234592.B
Odontoceti	ANCESTRAL SPECIES	4	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000162409.i	ENSGT00940000163858 #7	ENSGT00940000162409.j	ENSGT00940000160005.A #8	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214.q.a #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152.n.a #37	ENSGT01030000234592.B
Sperm whale	MODERN SPECIES	7	ENSPCTG00005006039	ENSPCTG00005005824 #8	TRIM77 (ENSPCTG00005005756)	NAALAD2 (ENSPCTG00005005669) #11	CHORDC1 (ENSPCTG00005005523) #12	ENSPCTG00005005478	ENSPCTG00005005441	FAT3 (ENSPCTG00005005410) #14	MTNR1B (ENSPCTG00005005362) #16	SLC36A4 (ENSPCTG00005005320) #17	DEUP1 (ENSPCTG00005005239) #18	ENSPCTG00005005223 #19	ENSPCTG00005005216 #19	CEP295 (ENSPCTG00005005109) #20	TAF1D (ENSPCTG00005004998) #21	C16H11orf54 (ENSPCTG00005004783) #22	MED17 (ENSPCTG00005004711) #23	VSTM5 (ENSPCTG00005004678) #24	ENSPCTG00005004592	ENSPCTG00005004559	HEPHL1 (ENSPCTG00005004530) #26	PANX1 (ENSPCTG00005004492) #27	IZUMO1R (ENSPCTG00005004480) #28	GPR83 (ENSPCTG00005004449) #29	ENSPCTG00005004432	MRE11 (ENSPCTG00005004248) #30	ANKRD49 (ENSPCTG00005012473) #31	C11orf97 (ENSPCTG00005012423) #32	FUT4 (ENSPCTG00005012401) #33	PIWIL4 (ENSPCTG00005012159) #34	AMOTL1 (ENSPCTG00005012114) #35
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00940000155336	ENSGT00940000159621	ENSGT00940000169935	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000162409.i	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000156185.s	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214.q.a #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084.w #36	ENSGT00940000162152.n.a #37	ENSGT01030000234592.B	ENSGT00950000183168.A
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000155336	ENSGT00940000159621	ENSGT00940000169935	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000162409.i	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000156185.s.a	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214.q.a #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000153309.d.g	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084.w #36	ENSGT00940000162152.n.a.b #37	ENSGT01030000234592.B
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000162409.i	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000156185.s.a	ENSGT00390000013276.r	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214.q.a #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000153309.d.g	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084.w #36	ENSGT00940000162152.n.a.b #37	ENSGT01030000234592.B
Narwhal	DUPLICATION
Narwhal	MODERN SPECIES	314	CTSC (ENSMMNG00015014542)	GRM5 (ENSMMNG00015014498)	TYR (ENSMMNG00015014453)	NOX4 (ENSMMNG00015021151)	NAALAD2 (ENSMMNG00015020956) #11	CHORDC1 (ENSMMNG00015020880) #12	FAT3 (ENSMMNG00015020732) #14	MTNR1B (ENSMMNG00015020672) #16	SLC36A4 (ENSMMNG00015020630) #17	DEUP1 (ENSMMNG00015020581) #18	SMCO4 (ENSMMNG00015020556) #19	ENSMMNG00015020542	ENSMMNG00015020536	CEP295 (ENSMMNG00015020472) #20	TAF1D (ENSMMNG00015020380) #21	ENSMMNG00015020304 #22	MED17 (ENSMMNG00015020217) #23	VSTM5 (ENSMMNG00015020170) #24	HEPHL1 (ENSMMNG00015020099) #26	PANX1 (ENSMMNG00015020072) #27	IZUMO1R (ENSMMNG00015020047) #28	GPR83 (ENSMMNG00015020020) #29	MRE11 (ENSMMNG00015019911) #30	ANKRD49 (ENSMMNG00015019870) #31	FUT4 (ENSMMNG00015019851) #33	PIWIL4 (ENSMMNG00015019794) #34	AMOTL1 (ENSMMNG00015019700) #35	ENSMMNG00015019674 #36	ENSMMNG00015019662 #37	ENDOD1 (ENSMMNG00015019650)	SESN3 (ENSMMNG00015019600)
Narwhal	MODERN SPECIES	311	STN1 (ENSMMNG00015013736)	SH3PXD2A (ENSMMNG00015013681)	NEURL1 (ENSMMNG00015013659)	CALHM3 (ENSMMNG00015013638)	CALHM1 (ENSMMNG00015013618)	CALHM2 (ENSMMNG00015013608)	PDCD11 (ENSMMNG00015013562)	ATP5MK (ENSMMNG00015013543)	TAF5 (ENSMMNG00015013528)	PCGF6 (ENSMMNG00015013501)	INA (ENSMMNG00015013479)	ENSMMNG00015013465	CNNM2 (ENSMMNG00015013452)	AS3MT (ENSMMNG00015013420)	BORCS7 (ENSMMNG00015013396)	ENSMMNG00015013382 #22	CYP17A1 (ENSMMNG00015013335)	ENSMMNG00015013292	SFXN2 (ENSMMNG00015013273)	ARL3 (ENSMMNG00015013259)	TRIM8 (ENSMMNG00015013233)	SUFU (ENSMMNG00015013204)	ACTR1A (ENSMMNG00015013180)	MFSD13A (ENSMMNG00015013161)	C10orf95 (ENSMMNG00015013148)	CUEDC2 (ENSMMNG00015013134)	FBXL15 (ENSMMNG00015013118)	PSD (ENSMMNG00015013097)	NFKB2 (ENSMMNG00015013070)	GBF1 (ENSMMNG00015013050)	PITX3 (ENSMMNG00015013029)
Beluga whale	MODERN SPECIES	87					ENSDLEG00000011110 #11	CHORDC1 (ENSDLEG00000011081) #12	FAT3 (ENSDLEG00000010985) #14	MTNR1B (ENSDLEG00000010941) #16	SLC36A4 (ENSDLEG00000010919) #17	ENSDLEG00000010889 #18	SMCO4 (ENSDLEG00000010877) #19	ENSDLEG00000010859	ENSDLEG00000010853	CEP295 (ENSDLEG00000009788) #20	TAF1D (ENSDLEG00000009654) #21	ENSDLEG00000009480 #22	MED17 (ENSDLEG00000009424) #23	VSTM5 (ENSDLEG00000009404) #24	ENSDLEG00000009395	HEPHL1 (ENSDLEG00000009188) #26	PANX1 (ENSDLEG00000009144) #27	IZUMO1R (ENSDLEG00000008834) #28	GPR83 (ENSDLEG00000008769) #29	MRE11 (ENSDLEG00000008671) #30	ANKRD49 (ENSDLEG00000008640) #31	FUT4 (ENSDLEG00000008615) #33	PIWIL4 (ENSDLEG00000008525) #34	AMOTL1 (ENSDLEG00000008425) #35	CWC15 (ENSDLEG00000008381) #36	ENDOD1 (ENSDLEG00000008365)	SESN3 (ENSDLEG00000008313)
Vaquita	MODERN SPECIES	19	GRM5 (ENSPSNG00000016691)	TYR (ENSPSNG00000016603)	NOX4 (ENSPSNG00000016374)	ENSPSNG00000016293	ENSPSNG00000015989	ENSPSNG00000015913	ENSPSNG00000015854 #37	NAALAD2 (ENSPSNG00000015587) #11	CHORDC1 (ENSPSNG00000015361) #12	FAT3 (ENSPSNG00000015176) #14	MTNR1B (ENSPSNG00000014997) #16	SLC36A4 (ENSPSNG00000014913) #17	DEUP1 (ENSPSNG00000014794) #18	ENSPSNG00000014662	CEP295 (ENSPSNG00000014268) #20	ENSPSNG00000013981 #22	TAF1D (ENSPSNG00000013901) #21	MED17 (ENSPSNG00000013775) #23	VSTM5 (ENSPSNG00000013668) #24	ENSPSNG00000013594	HEPHL1 (ENSPSNG00000013322) #26	PANX1 (ENSPSNG00000013265) #27	IZUMO1R (ENSPSNG00000013201) #28	GPR83 (ENSPSNG00000013087) #29	MRE11 (ENSPSNG00000012783) #30	ANKRD49 (ENSPSNG00000012741) #31	ENSPSNG00000012714 #33	PIWIL4 (ENSPSNG00000012478) #34	AMOTL1 (ENSPSNG00000012299) #35	ENSPSNG00000012253 #36	ENSPSNG00000012220 #37
Dolphin	MODERN SPECIES	1628														ENSTTRG00000001138 #20	TAF1D (ENSTTRG00000001139) #21	C11orf54 (ENSTTRG00000001140) #22	MED17 (ENSTTRG00000001141) #23
Blue whale	MODERN SPECIES	19	ENSBMSG00010000316	ENSBMSG00010000282 #8	TRIM77 (ENSBMSG00010008740)	NAALAD2 (ENSBMSG00010008680) #11	CHORDC1 (ENSBMSG00010008638) #12	ENSBMSG00010008616	ENSBMSG00010008607	FAT3 (ENSBMSG00010008516) #14	MTNR1B (ENSBMSG00010008461) #16	SLC36A4 (ENSBMSG00010008445) #17	DEUP1 (ENSBMSG00010008417) #18	SMCO4 (ENSBMSG00010008401) #19	ENSBMSG00010008389	CEP295 (ENSBMSG00010008344) #20	TAF1D (ENSBMSG00010008284) #21	ENSBMSG00010008251 #22	MED17 (ENSBMSG00010008219) #23	ENSBMSG00010008190	ENSBMSG00010008183	HEPHL1 (ENSBMSG00010008172) #26	PANX1 (ENSBMSG00010008164) #27	IZUMO1R (ENSBMSG00010008153) #28	GPR83 (ENSBMSG00010008125) #29	MRE11 (ENSBMSG00010008081) #30	ANKRD49 (ENSBMSG00010008053) #31	ENSBMSG00010008035 #37	C11orf97 (ENSBMSG00010008028) #32	ENSBMSG00010008018 #33	ENSBMSG00010008013	ENSBMSG00010008011 #34	AMOTL1 (ENSBMSG00010007997) #35
Cetacea	ANCESTRAL SPECIES	2	ENSGT00390000015971	ENSGT00940000156678	ENSGT00950000182802.A.ab.a.a.a.a.b.a.b.b	ENSGT00940000157711	ENSGT00940000153451.a.b	ENSGT00940000154775.c.b	ENSGT00940000156390	ENSGT00440000033408.a	ENSGT01000000221977	ENSGT00940000158809	ENSGT00940000157567	ENSGT00390000009751	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00390000017214.q.b #22	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000166073.b	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT01030000234637.a.b.b.r	ENSGT00940000153661.a.a	ENSGT00390000014429.b
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00390000015971	ENSGT00940000156678	ENSGT00950000182802.A.ab.a.a.a.a.b.a.b.b	ENSGT00940000157711	ENSGT00940000153451.a.b	ENSGT00940000154775.c.b	ENSGT00940000156390	ENSGT00440000033408.a	ENSGT01000000221977	ENSGT00940000158809	ENSGT00940000157567	ENSGT00390000009751	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00390000017214.q.b #22	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000166073.b	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT01030000234637.a.b.b.r	ENSGT00940000153661.a.a	ENSGT00390000014429.b
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00390000015971	ENSGT00940000156678	ENSGT00950000182802.A.ab.a.a.a.a.b.a.b.b	ENSGT00940000157711	ENSGT00940000153451.a.b	ENSGT00940000154775.c.b	ENSGT00940000156390	ENSGT00440000033408.a	ENSGT01000000221977	ENSGT00940000158809.i	ENSGT00940000157567	ENSGT00390000009751	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00390000017214.q.b #22	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000166073.b	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT01030000234637.a.b.b.r	ENSGT00940000153661.a.a	ENSGT00390000014429.b
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT00390000015971	ENSGT00940000156678	ENSGT00950000182802.A.ab.a.a.a.a.b.a.b.b	ENSGT00940000157711	ENSGT00940000153451.a.b	ENSGT00940000154775.c.b	ENSGT00940000156390	ENSGT00440000033408.a	ENSGT01000000221977	ENSGT00940000158809.i	ENSGT00940000157567	ENSGT00390000009751	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00390000017214.q.b #22	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000166073.b	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT01030000234637.a.b.b.r	ENSGT00940000153661.a.a	ENSGT00390000014429.b
Vaquita	MODERN SPECIES	11	ENSPSNG00000008481	SKIDA1 (ENSPSNG00000008497)	ENSPSNG00000008537	ENSPSNG00000008581	NEBL (ENSPSNG00000008689)	PLXDC2 (ENSPSNG00000008936)	ENSPSNG00000009028	MALRD1 (ENSPSNG00000009104)	ARL5B (ENSPSNG00000009165)	ENSPSNG00000009320	ENSPSNG00000009393	ITGB1 (ENSPSNG00000009566)	NRP1 (ENSPSNG00000009847)	PARD3 (ENSPSNG00000010628)	ENSPSNG00000014206	ENSPSNG00000014262 #22	CUL2 (ENSPSNG00000014334)	CREM (ENSPSNG00000014684)	ENSPSNG00000016206	ENSPSNG00000016245	CCNY (ENSPSNG00000016274)	ENSPSNG00000016308	APBB1IP (ENSPSNG00000016358)	ENSPSNG00000016582	PDSS1 (ENSPSNG00000016619)	ABI1 (ENSPSNG00000016723)	ACBD5 (ENSPSNG00000016966)	MASTL (ENSPSNG00000017353)	YME1L1 (ENSPSNG00000017478)	ENSPSNG00000017613	ENSPSNG00000017653
Monodontidae	ANCESTRAL SPECIES	22	ENSGT00940000156042	ENSGT00390000015971	ENSGT00940000156678	ENSGT00950000182802.A.ab.a.a.a.a.b.a.b.b	ENSGT00940000157711	ENSGT00940000153451.a.b	ENSGT00940000156390	ENSGT00440000033408.a	ENSGT01000000221977	ENSGT00940000158809.i	ENSGT00940000157567	ENSGT00390000009751	ENSGT01090000259987.a.b	ENSGT00940000157169	ENSGT00950000183214.a.b.a.a	ENSGT00390000017214.q.b #22	ENSGT00940000154926	ENSGT00940000156952	ENSGT00940000166073.b	ENSGT00940000164101.a	ENSGT00940000154453.a.b.b	ENSGT00940000156105	ENSGT00390000005508.b	ENSGT00940000153498.B.a	ENSGT00940000154811.A	ENSGT00940000156350	ENSGT00940000157002	ENSGT00550000074836	ENSGT00940000153661.a.a	ENSGT01030000234637.a.b.b.r	ENSGT00390000014429.b
Narwhal	MODERN SPECIES	308	ENSMMNG00015014486	MLLT10 (ENSMMNG00015014594)	SKIDA1 (ENSMMNG00015014859)	ENSMMNG00015014909	NEBL (ENSMMNG00015014944)	ENSMMNG00015014981	PLXDC2 (ENSMMNG00015015001)	ENSMMNG00015015028	MALRD1 (ENSMMNG00015015069)	ARL5B (ENSMMNG00015015129)	ENSMMNG00015015193	ITGB1 (ENSMMNG00015015280)	NRP1 (ENSMMNG00015015364)	PARD3 (ENSMMNG00015015482)	ENSMMNG00015015621	ENSMMNG00015015634 #22	CUL2 (ENSMMNG00015015681)	CREM (ENSMMNG00015015981)	ENSMMNG00015016421	ENSMMNG00015016440	CCNY (ENSMMNG00015016474)	APBB1IP (ENSMMNG00015016536)	PDSS1 (ENSMMNG00015016593)	ABI1 (ENSMMNG00015016765)	ACBD5 (ENSMMNG00015016999)	MASTL (ENSMMNG00015017123)	YME1L1 (ENSMMNG00015017184)	ENSMMNG00015017231	ANKRD26 (ENSMMNG00015017325)	CCDC3 (ENSMMNG00015017596)	ENSMMNG00015015568
Beluga whale	MODERN SPECIES	22	MLLT10 (ENSDLEG00000005121)	SKIDA1 (ENSDLEG00000005109)	NEBL (ENSDLEG00000005042)	NEBL (ENSDLEG00000005016)	ENSDLEG00000005011	PLXDC2 (ENSDLEG00000005004)	ENSDLEG00000004998	MALRD1 (ENSDLEG00000004988)	ARL5B (ENSDLEG00000004980)	ENSDLEG00000004974	ENSDLEG00000004949	ITGB1 (ENSDLEG00000004934)	NRP1 (ENSDLEG00000004921)	ENSDLEG00000004913	PARD3 (ENSDLEG00000004836)	ENSDLEG00000004816 #22	CUL2 (ENSDLEG00000004800)	CREM (ENSDLEG00000004793)	ENSDLEG00000004786	ENSDLEG00000004780	CCNY (ENSDLEG00000004766)	APBB1IP (ENSDLEG00000004755)	ENSDLEG00000004733	PDSS1 (ENSDLEG00000004718)	ABI1 (ENSDLEG00000004700)	ACBD5 (ENSDLEG00000004686)	MASTL (ENSDLEG00000004669)	ENSDLEG00000004666	YME1L1 (ENSDLEG00000004656)	ANKRD26 (ENSDLEG00000004565)	ENSDLEG00000004527
Blue whale	MODERN SPECIES	11	ENSBMSG00010004104	MLLT10 (ENSBMSG00010004128)	SKIDA1 (ENSBMSG00010004180)	ENSBMSG00010004190	ENSBMSG00010004203	NEBL (ENSBMSG00010004247)	ENSBMSG00010004405	PLXDC2 (ENSBMSG00010004417)	ENSBMSG00010004460	MALRD1 (ENSBMSG00010004478)	ARL5B (ENSBMSG00010004528)	ENSBMSG00010004573	ITGB1 (ENSBMSG00010004703)	NRP1 (ENSBMSG00010004765)	PARD3 (ENSBMSG00010004796)	ENSBMSG00010004829 #22	CUL2 (ENSBMSG00010004845)	CREM (ENSBMSG00010004910)	ENSBMSG00010005098	ENSBMSG00010005102	CCNY (ENSBMSG00010005110)	ENSBMSG00010005118	APBB1IP (ENSBMSG00010005134)	ENSBMSG00010005151	PDSS1 (ENSBMSG00010005161)	ABI1 (ENSBMSG00010005189)	ACBD5 (ENSBMSG00010005242)	MASTL (ENSBMSG00010005274)	YME1L1 (ENSBMSG00010005370)	ENSBMSG00010005060	ENSBMSG00010005091
Cetacea	ANCESTRAL SPECIES																	ENSGT00390000017214.r #22
Odontoceti	ANCESTRAL SPECIES																	ENSGT00390000017214.r #22
Odontoceti_a	ANCESTRAL SPECIES																	ENSGT00390000017214.r #22
Odontoceti_b	ANCESTRAL SPECIES																	ENSGT00390000017214.r #22
Vaquita	MODERN SPECIES	7	STN1 (ENSPSNG00000019572)	SH3PXD2A (ENSPSNG00000019335)	NEURL1 (ENSPSNG00000019212)	CALHM3 (ENSPSNG00000019156)	CALHM1 (ENSPSNG00000019125)	CALHM2 (ENSPSNG00000019092)	PDCD11 (ENSPSNG00000019025)	ENSPSNG00000018977	TAF5 (ENSPSNG00000018939)	PCGF6 (ENSPSNG00000018827)	INA (ENSPSNG00000018790)	NT5C2 (ENSPSNG00000018760)	CNNM2 (ENSPSNG00000018654)	AS3MT (ENSPSNG00000018610)	BORCS7 (ENSPSNG00000018573)	ENSPSNG00000018533 #22	CYP17A1 (ENSPSNG00000018242)	ENSPSNG00000018106	SFXN2 (ENSPSNG00000018035)	ARL3 (ENSPSNG00000017986)	ENSPSNG00000017958	TRIM8 (ENSPSNG00000017907)	SUFU (ENSPSNG00000017847)	ACTR1A (ENSPSNG00000017727)	MFSD13A (ENSPSNG00000017652)	CUEDC2 (ENSPSNG00000017566)	FBXL15 (ENSPSNG00000017495)	PSD (ENSPSNG00000017329)	NFKB2 (ENSPSNG00000017232)	GBF1 (ENSPSNG00000017028)	PITX3 (ENSPSNG00000016915)
Pecora	ANCESTRAL SPECIES	13	ENSGT00940000163858.f #7	ENSGT00940000162409.l	ENSGT00940000160005.A #8	ENSGT00940000163858.e.a.a #7	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27
Yarkand deer	MODERN SPECIES	11	ENSCHYG00000000475	ENSCHYG00000000439 #7	TRIM77 (ENSCHYG00000000430)	NAALAD2 (ENSCHYG00000000349) #11	CHORDC1 (ENSCHYG00000000310) #12	ENSCHYG00000000275	ENSCHYG00000000270	ENSCHYG00000000250	FAT3 (ENSCHYG00000000159) #14	MTNR1B (ENSCHYG00000000114) #16	SLC36A4 (ENSCHYG00000000088) #17	DEUP1 (ENSCHYG00000000039) #18	CEP295 (ENSCHYG00000020879) #20	TAF1D (ENSCHYG00000020606) #21	ENSCHYG00000020575	C11orf54 (ENSCHYG00000020500) #22	MED17 (ENSCHYG00000020141) #23	VSTM5 (ENSCHYG00000020086) #24	HEPHL1 (ENSCHYG00000019944) #26	PANX1 (ENSCHYG00000019895) #27	ENSCHYG00000019868	ENSCHYG00000019742
Percora_a	ANCESTRAL SPECIES	16	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000162409.k.b	ENSGT00940000162409.k.a.b	ENSGT00940000160005.A.q #8	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27
Bovidae	ANCESTRAL SPECIES	16	ENSGT00940000160005.A.r #8	ENSGT00940000162409.k.a.a.b	ENSGT00940000163858.f #7	ENSGT00940000163858.e.a.a #7	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27
Bovinae	ANCESTRAL SPECIES	27	ENSGT00940000160005.B #9	ENSGT00940000163858.e.b.a #7	ENSGT00940000162409.l	ENSGT00940000162409.k.a.b	ENSGT00940000163858.e.a.a #7	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00960000192099	ENSGT00940000157994 #26	ENSGT00940000153972.A #27
Bos	ANCESTRAL SPECIES	42	ENSGT00940000163858.e.b.a.b #7	ENSGT00940000162409.l	ENSGT00940000162409.k.a.a.a.b	ENSGT00940000162409.k.a.b	ENSGT00940000163858.e.a.a #7	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00960000192099	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT01030000234542.b.a.a.a.b.a.a.b
Bos_b	ANCESTRAL SPECIES	10	ENSGT00940000162409.l	ENSGT00940000163858.e.b.a.b #7	ENSGT01030000234531.A.b.b.b.i.a.a.a.b.b.a	ENSGT00940000162409.k.a.b	ENSGT00940000163858.e.a.a #7	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00960000192099	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT01030000234542.b.a.a.a.b.a.a.b
Cow	MODERN SPECIES	21	ENSBTAG00000052563	TRIM64 (ENSBTAG00000034940)	ENSBTAG00000052850 #7	TRIM77 (ENSBTAG00000016293)	NAALAD2 (ENSBTAG00000000284) #11	CHORDC1 (ENSBTAG00000013615) #12	ENSBTAG00000050093	ENSBTAG00000049527	FAT3 (ENSBTAG00000004081) #14	MTNR1B (ENSBTAG00000050009) #16	SLC36A4 (ENSBTAG00000008530) #17	DEUP1 (ENSBTAG00000035110) #18	SMCO4 (ENSBTAG00000033621) #19	CEP295 (ENSBTAG00000001902) #20	TAF1D (ENSBTAG00000003545) #21	C29H11orf54 (ENSBTAG00000003550) #22	MED17 (ENSBTAG00000003552) #23	VSTM5 (ENSBTAG00000002751) #24	ENSBTAG00000049484	HEPHL1 (ENSBTAG00000022960) #26	PANX1 (ENSBTAG00000012010) #27	ENSBTAG00000046335	ENSBTAG00000054019
Bos_a	ANCESTRAL SPECIES	103				ENSGT00940000162409.k.a.b	ENSGT00940000163858.e.a.a #7	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT01030000234542.b.a.a.a.b.a.a.b
Wild yak	MODERN SPECIES	457								FAT3 (ENSBMUG00000017018) #14	ENSBMUG00000017039	MTNR1B (ENSBMUG00000017049) #16	SLC36A4 (ENSBMUG00000017061) #17	DEUP1 (ENSBMUG00000017087) #18	SMCO4 (ENSBMUG00000017105) #19	CEP295 (ENSBMUG00000017204) #20	TAF1D (ENSBMUG00000017333) #21	C11orf54 (ENSBMUG00000017380) #22	MED17 (ENSBMUG00000017419) #23	VSTM5 (ENSBMUG00000017438) #24	ENSBMUG00000017446	HEPHL1 (ENSBMUG00000017459) #26	PANX1 (ENSBMUG00000017468) #27	ENSBMUG00000017474
Domestic yak	MODERN SPECIES	21	ENSBGRG00000015144	TRIM77 (ENSBGRG00000015244)	NAALAD2 (ENSBGRG00000015428) #11	CHORDC1 (ENSBGRG00000016176) #12	ENSBGRG00000016452	ENSBGRG00000016466	ENSBGRG00000016503	ENSBGRG00000016538 #14	MTNR1B (ENSBGRG00000016629) #16	ENSBGRG00000016658	SLC36A4 (ENSBGRG00000016674) #17	DEUP1 (ENSBGRG00000016749) #18	SMCO4 (ENSBGRG00000017125) #19	CEP295 (ENSBGRG00000017172) #20	TAF1D (ENSBGRG00000017699) #21	C11orf54 (ENSBGRG00000017763) #22	MED17 (ENSBGRG00000018240) #23	VSTM5 (ENSBGRG00000018604) #24	HEPHL1 (ENSBGRG00000018644) #26	PANX1 (ENSBGRG00000018761) #27	ENSBGRG00000018859	ENSBGRG00000018874	ENSBGRG00000019055	ENSBGRG00000019142
American bison	DUPLICATION
American bison	MODERN SPECIES	3270								ENSBBBG00000013640	FAT3 (ENSBBBG00000013625) #14	SLC36A4 (ENSBBBG00000002797) #17	DEUP1 (ENSBBBG00000002788) #18	ENSBBBG00000013505	SMCO4 (ENSBBBG00000013502) #19	CEP295 (ENSBBBG00000013492) #20	TAF1D (ENSBBBG00000013429) #21	ENSBBBG00000013421 #22	MED17 (ENSBBBG00000013353) #23	VSTM5 (ENSBBBG00000002709) #24	ENSBBBG00000013316	HEPHL1 (ENSBBBG00000013308) #26	PANX1 (ENSBBBG00000013290) #27	ENSBBBG00000001620
American bison	MODERN SPECIES	3177				ENSBBBG00000010613	CHMP7 (ENSBBBG00000010611)	R3HCC1 (ENSBBBG00000010600)	LOXL2 (ENSBBBG00000025500)	ENTPD4 (ENSBBBG00000025429)	SLC25A37 (ENSBBBG00000025366)	ENSBBBG00000025361	STC1 (ENSBBBG00000025351)	ENSBBBG00000025331	ADAM28 (ENSBBBG00000006709)	ADAMDEC1 (ENSBBBG00000007853)	ADAM7 (ENSBBBG00000007763)	ENSBBBG00000025051 #22
Caprinae	ANCESTRAL SPECIES	29	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000163858.e.a.a #7	ENSGT00940000163778	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27
Goat	MODERN SPECIES	21	ENSCHIG00000023687	TYR (ENSCHIG00000004892)	NOX4 (ENSCHIG00000021611)	FOLH1 (ENSCHIG00000013522) ##11	ENSCHIG00000023324 #7	TRIM77 (ENSCHIG00000019554)	NAALAD2 (ENSCHIG00000017338) #11	CHORDC1 (ENSCHIG00000013507) #12	ENSCHIG00000010579 #14	MTNR1B (ENSCHIG00000019999) #16	SLC36A4 (ENSCHIG00000025083) #17	DEUP1 (ENSCHIG00000018338) #18	SMCO4 (ENSCHIG00000002094) #19	CEP295 (ENSCHIG00000017706) #20	TAF1D (ENSCHIG00000026408) #21	C11orf54 (ENSCHIG00000016176) #22	MED17 (ENSCHIG00000014403) #23	VSTM5 (ENSCHIG00000025656) #24	HEPHL1 (ENSCHIG00000019344) #26	PANX1 (ENSCHIG00000011075) #27
Siberian musk deer	MODERN SPECIES	105															MED17 (ENSMMSG00000019337) #23	ENSMMSG00000019294 #22
Eulipotyphla	ANCESTRAL SPECIES	1636																ENSGT00390000017214 #22	ENSGT00390000011810 #23
Hedgehog	MODERN SPECIES	12646																C11orf54 (ENSEEUG00000000920) #22
Common shrew	MODERN SPECIES	5862																C11orf54 (ENSSARG00000005566) #22	MED17 (ENSSARG00000005589) #23
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00940000162409	ENSGT00940000163419	ENSGT00940000160005.A #8	ENSGT00940000163778	ENSGT00940000163440	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Primates	ANCESTRAL SPECIES		ENSGT00940000162409	ENSGT00940000163419	ENSGT00940000160005.A #8	ENSGT00940000163778	ENSGT00940000163440	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000162409	ENSGT00940000163419	ENSGT00940000160005.A #8	ENSGT00940000163778	ENSGT00940000163440	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000160005.A #8	ENSGT00940000163419	ENSGT00940000162409	ENSGT00940000163440	ENSGT00940000163858 #7	ENSGT00940000163213.a.b	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919 #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000160005.A #8	ENSGT00940000163419	ENSGT00940000162409	ENSGT00940000163440	ENSGT00940000163213.a.b	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00390000013073.a	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919.e #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00940000165665.b	ENSGT00940000163419.d.a.b	ENSGT00940000163419.c	ENSGT00940000163440.d	ENSGT00940000163213.a.b.b.a.b	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00390000013073.a	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919.e #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000163213.a.b.b.b	ENSGT00940000163419.d.a.a	ENSGT00940000163419.c	ENSGT00940000163440.d	ENSGT00940000163213.a.b.b.a.a	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00390000013073.a	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919.e #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT00940000165078.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000163213.a.b.b.b	ENSGT00940000163419.c	ENSGT00940000163440.d	ENSGT00940000163213.a.b.b.a.a.a.a	ENSGT00940000163213.a.b.b.a.a.b	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00390000013073.a	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00390000018018.sb.a.b	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919.e #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000163778	ENSGT00940000165665.b.d	ENSGT00940000163419.c.b	ENSGT00940000163440.d	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00390000018018.sb.a.b	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919.e #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Pan	ANCESTRAL SPECIES	1	ENSGT00940000163440.d	ENSGT00940000163213.a.b.b.a.a.b	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a.a #12	ENSGT00950000182825.A.a.b.a.b.a.a.a.b	ENSGT00940000167275	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00390000008496.db.b	ENSGT00390000013073.a	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00390000018018.sb.a.b	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919.e #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Chimpanzee	MODERN SPECIES	2	ENSPTRG00000034335	NAALAD2 (ENSPTRG00000004163) #11	CHORDC1 (ENSPTRG00000004164) #12	ENSPTRG00000051439	FAT3 (ENSPTRG00000004168) #14	MTNR1B (ENSPTRG00000004170) #16	SLC36A4 (ENSPTRG00000004171) #17	ENSPTRG00000043441	ENSPTRG00000043610	DEUP1 (ENSPTRG00000004172) #18	SMCO4 (ENSPTRG00000046135) #19	ENSPTRG00000045360	ENSPTRG00000048746	CEP295 (ENSPTRG00000004175) #20	TAF1D (ENSPTRG00000032462) #21	C11H11orf54 (ENSPTRG00000004177) #22	MED17 (ENSPTRG00000004178) #23	VSTM5 (ENSPTRG00000052018) #24	HEPHL1 (ENSPTRG00000004180) #26	PANX1 (ENSPTRG00000004181) #27	ENSPTRG00000044783	IZUMO1R (ENSPTRG00000004182) #28	GPR83 (ENSPTRG00000004183) #29	MRE11 (ENSPTRG00000004184) #30	ANKRD49 (ENSPTRG00000004185) #31	C11H11orf97 (ENSPTRG00000047025) #32	FUT4 (ENSPTRG00000028425) #33	PIWIL4 (ENSPTRG00000004187) #34	AMOTL1 (ENSPTRG00000004188) #35	CWC15 (ENSPTRG00000044239) #36	KDM4D (ENSPTRG00000004190) #37
Bonobo	MODERN SPECIES	2	NAALAD2 (ENSPPAG00000040316) #11	CHORDC1 (ENSPPAG00000029245) #12	ENSPPAG00000027721	ENSPPAG00000040312	ENSPPAG00000042139 #14	MTNR1B (ENSPPAG00000030637) #16	ENSPPAG00000039538	SLC36A4 (ENSPPAG00000038875) #17	ENSPPAG00000043411	DEUP1 (ENSPPAG00000028857) #18	SMCO4 (ENSPPAG00000016913) #19	ENSPPAG00000037680	ENSPPAG00000000088	CEP295 (ENSPPAG00000041025) #20	TAF1D (ENSPPAG00000034322) #21	C11orf54 (ENSPPAG00000038203) #22	MED17 (ENSPPAG00000038273) #23	VSTM5 (ENSPPAG00000037419) #24	HEPHL1 (ENSPPAG00000040046) #26	PANX1 (ENSPPAG00000040074) #27	ENSPPAG00000026114	IZUMO1R (ENSPPAG00000041423) #28	GPR83 (ENSPPAG00000039550) #29	MRE11 (ENSPPAG00000034731) #30	ANKRD49 (ENSPPAG00000037946) #31	C11orf97 (ENSPPAG00000031103) #32	FUT4 (ENSPPAG00000021481) #33	PIWIL4 (ENSPPAG00000031181) #34	AMOTL1 (ENSPPAG00000036699) #35	CWC15 (ENSPPAG00000033609) #36	KDM4E (ENSPPAG00000022047)
Human	MODERN SPECIES	2	TRIM64B (ENSG00000189253)	TRIM49D1 (ENSG00000223417)	TRIM49D2 (ENSG00000233802)	TRIM64 (ENSG00000204450)	TRIM49C (ENSG00000204449)	UBTFL1 (ENSG00000255009) #7	NAALAD2 (ENSG00000077616) #11	CHORDC1 (ENSG00000110172) #12	FAT3 (ENSG00000165323) #14	MTNR1B (ENSG00000134640) #16	SLC36A4 (ENSG00000180773) #17	DEUP1 (ENSG00000165325) #18	SMCO4 (ENSG00000166002) #19	CEP295 (ENSG00000166004) #20	TAF1D (ENSG00000166012) #21	C11orf54 (ENSG00000182919) #22	ENSG00000284057	MED17 (ENSG00000042429) #23	VSTM5 (ENSG00000214376) #24	HEPHL1 (ENSG00000181333) #26	PANX1 (ENSG00000110218) #27	IZUMO1R (ENSG00000183560) #28	GPR83 (ENSG00000123901) #29	MRE11 (ENSG00000020922) #30	ANKRD49 (ENSG00000168876) #31	C11orf97 (ENSG00000257057) #32	PIWIL4 (ENSG00000134627) #34	FUT4 (ENSG00000196371) #33	AMOTL1 (ENSG00000166025) #35	CWC15 (ENSG00000150316) #36	KDM4D (ENSG00000186280) #37
Gorilla	MODERN SPECIES	2	TYR (ENSGGOG00000009122)	ENSGGOG00000003220	ENSGGOG00000026540	ENSGGOG00000008355	ENSGGOG00000040268	NAALAD2 (ENSGGOG00000034824) #11	CHORDC1 (ENSGGOG00000027396) #12	FAT3 (ENSGGOG00000017065) #14	MTNR1B (ENSGGOG00000013924) #16	SLC36A4 (ENSGGOG00000028079) #17	DEUP1 (ENSGGOG00000016147) #18	SMCO4 (ENSGGOG00000011166) #19	ENSGGOG00000008382	CEP295 (ENSGGOG00000009396) #20	TAF1D (ENSGGOG00000028407) #21	C11orf54 (ENSGGOG00000014705) #22	MED17 (ENSGGOG00000010401) #23	VSTM5 (ENSGGOG00000010409) #24	HEPHL1 (ENSGGOG00000000624) #26	PANX (ENSGGOG00000005596) #27	ENSGGOG00000037261	IZUMO1R (ENSGGOG00000014840) #28	GPR83 (ENSGGOG00000007694) #29	MRE11 (ENSGGOG00000008192) #30	ANKRD49 (ENSGGOG00000008207) #31	C11orf97 (ENSGGOG00000036219) #32	PIWIL4 (ENSGGOG00000016276) #34	AMOTL1 (ENSGGOG00000001033) #35	CWC15 (ENSGGOG00000011926) #36	KDM4D (ENSGGOG00000010102) #37	SRSF8 (ENSGGOG00000022679)
Orangutan	MODERN SPECIES	2	ENSPPYG00000034343	ENSPPYG00000003760	ENSPPYG00000036641	ENSPPYG00000019959	ENSPPYG00000040269	ENSPPYG00000039594	ENSPPYG00000036793	NAALAD2 (ENSPPYG00000003763) #11	CHORDC1 (ENSPPYG00000003764) #12	FAT3 (ENSPPYG00000003767) #14	MTNR1B (ENSPPYG00000003768) #16	SLC36A4 (ENSPPYG00000003769) #17	DEUP1 (ENSPPYG00000003770) #18	CEP295 (ENSPPYG00000003773) #20	TAF1D (ENSPPYG00000003774) #21	C11orf54 (ENSPPYG00000003775) #22	MED17 (ENSPPYG00000003776) #23	VSTM5 (ENSPPYG00000003777) #24	HEPHL1 (ENSPPYG00000003778) #26	PANX1 (ENSPPYG00000003779) #27	IZUMO1R (ENSPPYG00000003780) #28	GPR83 (ENSPPYG00000041687) #29	MRE11 (ENSPPYG00000037469) #30	ENSPPYG00000041706	ENSPPYG00000029760 #32	FUT4 (ENSPPYG00000037042) #33	PIWIL4 (ENSPPYG00000003783) #34	AMOTL1 (ENSPPYG00000003784) #35	CWC15 (ENSPPYG00000003785) #36	KDM4E (ENSPPYG00000041335)	KDM4F (ENSPPYG00000037461)
Gibbon	MODERN SPECIES	5	TRIM77 (ENSNLEG00000015886)	ENSNLEG00000015860	ENSNLEG00000010471	ENSNLEG00000007077	ENSNLEG00000030564	NAALAD2 (ENSNLEG00000007078) #11	CHORDC1 (ENSNLEG00000007079) #12	ENSNLEG00000028688	FAT3 (ENSNLEG00000007081) #14	ENSNLEG00000027382 #16	SLC36A4 (ENSNLEG00000028135) #17	DEUP1 (ENSNLEG00000007089) #18	SMCO4 (ENSNLEG00000027353) #19	ENSNLEG00000030226	CEP295 (ENSNLEG00000007093) #20	C11orf54 (ENSNLEG00000007095) #22	TAF1D (ENSNLEG00000007094) #21	MED17 (ENSNLEG00000007096) #23	VSTM5 (ENSNLEG00000007101) #24	HEPHL1 (ENSNLEG00000007103) #26	PANX1 (ENSNLEG00000007105) #27	ENSNLEG00000007107	IZUMO1R (ENSNLEG00000007108) #28	GPR83 (ENSNLEG00000007109) #29	MRE11 (ENSNLEG00000007111) #30	ANKRD49 (ENSNLEG00000007115) #31	ENSNLEG00000033459	C11orf97 (ENSNLEG00000007117) #32	ENSNLEG00000007118 #33	PIWIL4 (ENSNLEG00000007119) #34	AMOTL1 (ENSNLEG00000007120) #35
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000163213.a.b.c.b	ENSGT00940000163419	ENSGT00940000163440.b.a	ENSGT00940000160005.A.h #8	ENSGT00940000163213.a.b.c.a	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00390000013073.a	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919.e #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00940000163440.b.b	ENSGT00940000162409	ENSGT00940000163419.g	ENSGT00940000163440.b.a	ENSGT00940000163213.a.b.c.a	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00390000013073.a	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919.e #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000163778	ENSGT00940000163440.b.a	ENSGT00940000163213.a.b.d	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00390000013073.a	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919.e #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000163778	ENSGT00940000163440.b.a	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.a.b.a.b.b.a.b	ENSGT00940000154174.s.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00390000013073.a	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919.e #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT00940000165078.a
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000163440.b.a	ENSGT00940000163419.g	ENSGT00940000163440.b.b	ENSGT00940000160005.A.g.a #8	ENSGT00940000163213.a.b.c.a	ENSGT00940000163440.a.b.a	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00390000017288.c #30	ENSGT00390000003919.e #31	ENSGT00520000058823 #32	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT00940000165078.a	ENSGT00940000165078.b	ENSGT00940000154883.g.a.a
Crab-eating macaque	MODERN SPECIES	5	ENSMFAG00000033361	ENSMFAG00000044028	ENSMFAG00000041752	ENSMFAG00000051720 #8	ENSMFAG00000033612	ENSMFAG00000052719	NAALAD2 (ENSMFAG00000034412) #11	CHORDC1 (ENSMFAG00000035565) #12	FAT3 (ENSMFAG00000035883) #14	ENSMFAG00000055749	MTNR1B (ENSMFAG00000038271) #16	SLC36A4 (ENSMFAG00000041537) #17	DEUP1 (ENSMFAG00000032572) #18	CEP295 (ENSMFAG00000041174) #20	TAF1D (ENSMFAG00000039236) #21	C11orf54 (ENSMFAG00000039634) #22	ENSMFAG00000048679	MED17 (ENSMFAG00000003118) #23	VSTM5 (ENSMFAG00000054321) #24	HEPHL1 (ENSMFAG00000046086) #26	PANX1 (ENSMFAG00000002464) #27	IZUMO1R (ENSMFAG00000030684) #28	MRE11 (ENSMFAG00000039328) #30	ANKRD49 (ENSMFAG00000038557) #31	C11orf97 (ENSMFAG00000044586) #32	PIWIL4 (ENSMFAG00000042631) #34	AMOTL1 (ENSMFAG00000032749) #35	CWC15 (ENSMFAG00000044052) #36	KDM4D (ENSMFAG00000024894) #37	ENSMFAG00000040102	KDM4F (ENSMFAG00000059067)
Pig-tailed macaque	MODERN SPECIES	109	ENSMNEG00000041095	ENSMNEG00000044387	ENSMNEG00000009246	NAALAD2 (ENSMNEG00000042681) #11	CHORDC1 (ENSMNEG00000039325) #12	ENSMNEG00000013846	ENSMNEG00000032920	FAT3 (ENSMNEG00000033595) #14	MTNR1B (ENSMNEG00000031635) #16	SLC36A4 (ENSMNEG00000044920) #17	DEUP1 (ENSMNEG00000041961) #18	SMCO4 (ENSMNEG00000013588) #19	ENSMNEG00000042890	CEP295 (ENSMNEG00000041554) #20	TAF1D (ENSMNEG00000040024) #21	C11orf54 (ENSMNEG00000013934) #22	MED17 (ENSMNEG00000028879) #23	VSTM5 (ENSMNEG00000045447) #24	HEPHL1 (ENSMNEG00000038689) #26	PANX1 (ENSMNEG00000035007) #27	IZUMO1R (ENSMNEG00000030482) #28	GPR83 (ENSMNEG00000043160) #29	MRE11 (ENSMNEG00000029815) #30	ANKRD49 (ENSMNEG00000034043) #31	ENSMNEG00000020136	C11orf97 (ENSMNEG00000031514) #32	PIWIL4 (ENSMNEG00000037456) #34	AMOTL1 (ENSMNEG00000044021) #35	CWC15 (ENSMNEG00000033968) #36	KDM4D (ENSMNEG00000026134) #37	ENSMNEG00000035040
Cercopithecinae_b	ANCESTRAL SPECIES	21					ENSGT00940000162409	ENSGT00940000163213.a.a	ENSGT00940000167275	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00390000013073.a	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919.e #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Olive baboon	MODERN SPECIES	3	ENSPANG00000022721	ENSPANG00000049769	ENSPANG00000047081	ENSPANG00000045071	ENSPANG00000038934	ENSPANG00000040125	FAT3 (ENSPANG00000018585) #14	MTNR1B (ENSPANG00000018013) #16	ENSPANG00000044418	ENSPANG00000047752	SLC36A4 (ENSPANG00000004551) #17	DEUP1 (ENSPANG00000010678) #18	SMCO4 (ENSPANG00000000062) #19	CEP295 (ENSPANG00000008341) #20	TAF1D (ENSPANG00000018408) #21	C11orf54 (ENSPANG00000008370) #22	MED17 (ENSPANG00000022409) #23	VSTM5 (ENSPANG00000004039) #24	ENSPANG00000045474	HEPHL1 (ENSPANG00000019176) #26	PANX1 (ENSPANG00000019663) #27	ENSPANG00000040070	IZUMO1R (ENSPANG00000034439) #28	ENSPANG00000040668	MRE11 (ENSPANG00000017475) #30	ENSPANG00000032105 #32	FUT4 (ENSPANG00000051031) #33	ENSPANG00000046304	PIWIL4 (ENSPANG00000016066) #34	AMOTL1 (ENSPANG00000018871) #35	CWC15 (ENSPANG00000019125) #36
Cercopithecinae_d	ANCESTRAL SPECIES	45							ENSGT00940000167275	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00390000013073.a	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT00910000147855	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919.e #31	ENSGT00910000147289	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36
Drill	MODERN SPECIES	1152							ENSMLEG00000034203	FAT3 (ENSMLEG00000038737) #14	MTNR1B (ENSMLEG00000039776) #16	SLC36A4 (ENSMLEG00000030119) #17	DEUP1 (ENSMLEG00000037342) #18	SMCO4 (ENSMLEG00000022536) #19	ENSMLEG00000001837	CEP295 (ENSMLEG00000033140) #20	TAF1D (ENSMLEG00000039639) #21	C11orf54 (ENSMLEG00000035235) #22	MED17 (ENSMLEG00000027939) #23	ENSMLEG00000035673	VSTM5 (ENSMLEG00000027079) #24	HEPHL1 (ENSMLEG00000038476) #26	PANX1 (ENSMLEG00000041168) #27	IZUMO1R (ENSMLEG00000033707) #28	GPR83 (ENSMLEG00000032323) #29
Sooty mangabey	MODERN SPECIES	216								ENSCATG00000037733 #14	MTNR1B (ENSCATG00000033084) #16	SLC36A4 (ENSCATG00000034032) #17	DEUP1 (ENSCATG00000035569) #18	SMCO4 (ENSCATG00000020187) #19	ENSCATG00000020258	CEP295 (ENSCATG00000038930) #20	TAF1D (ENSCATG00000042343) #21	C11orf54 (ENSCATG00000035750) #22	MED17 (ENSCATG00000008395) #23	ENSCATG00000039624	VSTM5 (ENSCATG00000040111) #24	HEPHL1 (ENSCATG00000041665) #26	PANX1 (ENSCATG00000002907) #27	GPR83 (ENSCATG00000009776) #29	MRE11 (ENSCATG00000040989) #30	ANKRD49 (ENSCATG00000032771) #31	ENSCATG00000019568	C11orf97 (ENSCATG00000029479) #32	PIWIL4 (ENSCATG00000030289) #34	AMOTL1 (ENSCATG00000035778) #35
Vervet Monkey	MODERN SPECIES		ENSCSAG00000003564	ENSCSAG00000003560	ENSCSAG00000003550	NAALAD2 (ENSCSAG00000003546) #11	CHORDC1 (ENSCSAG00000003537) #12	ENSCSAG00000000609	FAT3 (ENSCSAG00000003512) #14	ENSCSAG00000003478	MTNR1B (ENSCSAG00000003473) #16	SLC36A4 (ENSCSAG00000003469) #17	DEUP1 (ENSCSAG00000003465) #18	SMCO4 (ENSCSAG00000000608) #19	ENSCSAG00000003461	CEP295 (ENSCSAG00000003445) #20	TAF1D (ENSCSAG00000003431) #21	C11orf54 (ENSCSAG00000003429) #22	MED17 (ENSCSAG00000003426) #23	VSTM5 (ENSCSAG00000003423) #24	HEPHL1 (ENSCSAG00000003418) #26	PANX1 (ENSCSAG00000003406) #27	IZUMO1R (ENSCSAG00000003400) #28	GPR83 (ENSCSAG00000003397) #29	MRE11 (ENSCSAG00000003391) #30	ANKRD49 (ENSCSAG00000003379) #31	C11orf97 (ENSCSAG00000003377) #32	FUT4 (ENSCSAG00000000607) #33	PIWIL4 (ENSCSAG00000003360) #34	AMOTL1 (ENSCSAG00000003315) #35	CWC15 (ENSCSAG00000003299) #36	KDM4D (ENSCSAG00000003295) #37	KDM4E (ENSCSAG00000003292)
Rhinopithecus	ANCESTRAL SPECIES	449								ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00390000013073.a.b	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24
Black snub-nosed monkey	MODERN SPECIES	2476										ENSRBIG00000037835 #17	DEUP1 (ENSRBIG00000039067) #18	SMCO4 (ENSRBIG00000021343) #19	ENSRBIG00000042168	CEP295 (ENSRBIG00000039647) #20	TAF1D (ENSRBIG00000031274) #21	C11orf54 (ENSRBIG00000030764) #22	MED17 (ENSRBIG00000040881) #23	VSTM5 (ENSRBIG00000036607) #24	ENSRBIG00000022813
Golden snub-nosed monkey	MODERN SPECIES	3179							ENSRROG00000028601 #14	MTNR1B (ENSRROG00000016923) #16	SLC36A4 (ENSRROG00000029629) #17	DEUP1 (ENSRROG00000014120) #18	SMCO4 (ENSRROG00000028523) #19	ENSRROG00000044461	ENSRROG00000043758	CEP295 (ENSRROG00000040195) #20	TAF1D (ENSRROG00000036707) #21	C11orf54 (ENSRROG00000038456) #22	MED17 (ENSRROG00000033837) #23	VSTM5 (ENSRROG00000008637) #24
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00940000163778	ENSGT00940000160005.A.i #8	ENSGT00940000163440	ENSGT00940000163419.j	ENSGT00940000165665	ENSGT00940000163213.a.b	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT00940000165078
Cebidae	ANCESTRAL SPECIES		ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000163778	ENSGT00940000160005.A.i #8	ENSGT00940000163440	ENSGT00940000163419.j	ENSGT00940000163213.a.b	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158.e.b #35	ENSGT00940000160158.e.a #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Cebidae_a	ANCESTRAL SPECIES	73	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000163778	ENSGT00940000160005.A.i #8	ENSGT00940000163440	ENSGT00940000163419.j	ENSGT00940000163213.a.b	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.s.a.a.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288.c #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158.e.b #35
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	241									ENSCCAG00000019974	FAT3 (ENSCCAG00000029618) #14	SLC36A4 (ENSCCAG00000029908) #17	DEUP1 (ENSCCAG00000025548) #18	SMCO4 (ENSCCAG00000019420) #19	CEP295 (ENSCCAG00000025065) #20	TAF1D (ENSCCAG00000018289) #21	ENSCCAG00000025059 #22	MED17 (ENSCCAG00000034414) #23	VSTM5 (ENSCCAG00000021584) #24	HEPHL1 (ENSCCAG00000030082) #26	PANX1 (ENSCCAG00000007465) #27	IZUMO1R (ENSCCAG00000021617) #28	GPR83 (ENSCCAG00000028755) #29	MRE11 (ENSCCAG00000013972) #30	ANKRD49 (ENSCCAG00000027797) #31	C11orf97 (ENSCCAG00000029425) #32	FUT4 (ENSCCAG00000013593) #33	ENSCCAG00000021211	PIWIL4 (ENSCCAG00000017581) #34	ENSCCAG00000036203 #35
Capuchin	MODERN SPECIES	42	ENSCCAG00000035298	ITPKB (ENSCCAG00000017443)	STUM (ENSCCAG00000027365)	PARP1 (ENSCCAG00000033484)	LIN9 (ENSCCAG00000024893)	MIXL1 (ENSCCAG00000030603)	ACBD3 (ENSCCAG00000029038)	ENSCCAG00000021678	SDE2 (ENSCCAG00000033106)	ENSCCAG00000024966	PYCR2 (ENSCCAG00000029202)	ENSCCAG00000030395	TMEM63A (ENSCCAG00000022581)	EPHX1 (ENSCCAG00000024699)	SRP9 (ENSCCAG00000034464)	ENSCCAG00000025068 #22	ENAH (ENSCCAG00000026712)	LBR (ENSCCAG00000018433)	ENSCCAG00000017821	DNAH14 (ENSCCAG00000023187)	ENSCCAG00000023109	CNIH3 (ENSCCAG00000018443)	WDR26 (ENSCCAG00000035904)	CNIH4 (ENSCCAG00000037449)	NVL (ENSCCAG00000037416)	DEGS1 (ENSCCAG00000037018)	FBXO28 (ENSCCAG00000019791)	TP53BP2 (ENSCCAG00000029817)	CAPN2 (ENSCCAG00000021862)	CAPN8 (ENSCCAG00000030926)	SUSD4 (ENSCCAG00000002755)
Bolivian squirrel monkey	MODERN SPECIES	188					ENSSBOG00000020924	ENSSBOG00000030835	NAALAD2 (ENSSBOG00000025125) #11	ENSSBOG00000023416 #12	FAT3 (ENSSBOG00000020939) #14	MTNR1B (ENSSBOG00000020942) #16	SLC36A4 (ENSSBOG00000022344) #17	DEUP1 (ENSSBOG00000026759) #18	SMCO4 (ENSSBOG00000011877) #19	CEP295 (ENSSBOG00000019495) #20	TAF1D (ENSSBOG00000027735) #21	C11orf54 (ENSSBOG00000032062) #22	MED17 (ENSSBOG00000003072) #23	VSTM5 (ENSSBOG00000025938) #24	HEPHL1 (ENSSBOG00000034453) #26	PANX1 (ENSSBOG00000009703) #27	IZUMO1R (ENSSBOG00000021841) #28	GPR83 (ENSSBOG00000024347) #29	MRE11 (ENSSBOG00000016957) #30	ANKRD49 (ENSSBOG00000034549) #31	C11orf97 (ENSSBOG00000017516) #32	FUT4 (ENSSBOG00000020691) #33	PIWIL4 (ENSSBOG00000024534) #34
Mas night monkey	MODERN SPECIES	1013	ENSANAG00000025882	ENSANAG00000023802	ENSANAG00000028974	NAALAD2 (ENSANAG00000021262) #11	CHORDC1 (ENSANAG00000024414) #12	ENSANAG00000023865	FAT3 (ENSANAG00000026539) #14	MTNR1B (ENSANAG00000021351) #16	SLC36A4 (ENSANAG00000028156) #17	DEUP1 (ENSANAG00000031473) #18	SMCO4 (ENSANAG00000015761) #19	ENSANAG00000029028	CEP295 (ENSANAG00000032138) #20	TAF1D (ENSANAG00000022083) #21	ENSANAG00000029536	C11orf54 (ENSANAG00000033486) #22	MED17 (ENSANAG00000032438) #23	VSTM5 (ENSANAG00000022799) #24	HEPHL1 (ENSANAG00000030738) #26	PANX1 (ENSANAG00000030398) #27	IZUMO1R (ENSANAG00000030382) #28	GPR83 (ENSANAG00000021555) #29	ENSANAG00000010232	MRE11 (ENSANAG00000020274) #30	ANKRD49 (ENSANAG00000030055) #31	C11orf97 (ENSANAG00000023746) #32	FUT4 (ENSANAG00000011701) #33	PIWIL4 (ENSANAG00000031191) #34	AMOTL1 (ENSANAG00000033879) #35
Tarsier	MODERN SPECIES	1298														ENSTSYG00000014254 ##20	TAF1D (ENSTSYG00000014258) #21	CUNH11orf54 (ENSTSYG00000000521) #22	MED17 (ENSTSYG00000009789) #23	VSTM5 (ENSTSYG00000012692) #24
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000160005.A.l #8	ENSGT00940000163440	ENSGT00940000160005.A.k #8	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Lemuriformes_a	ANCESTRAL SPECIES	147									ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000164415	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152.a #37
Coquerels sifaka	MODERN SPECIES	694								ENSPCOG00000026263	FAT3 (ENSPCOG00000014723) #14	MTNR1B (ENSPCOG00000011958) #16	SLC36A4 (ENSPCOG00000023046) #17	DEUP1 (ENSPCOG00000006729) #18	SMCO4 (ENSPCOG00000026449) #19	CEP295 (ENSPCOG00000004897) #20	TAF1D (ENSPCOG00000018649) #21	C11orf54 (ENSPCOG00000017307) #22	MED17 (ENSPCOG00000018257) #23
Greater bamboo lemur	MODERN SPECIES	414								ENSPSMG00000021720	FAT3 (ENSPSMG00000021711) #14	MTNR1B (ENSPSMG00000021687) #16	SLC36A4 (ENSPSMG00000021672) #17	DEUP1 (ENSPSMG00000021664) #18	SMCO4 (ENSPSMG00000021635) #19	CEP295 (ENSPSMG00000021623) #20	TAF1D (ENSPSMG00000021588) #21	C11orf54 (ENSPSMG00000021573) #22	MED17 (ENSPSMG00000021504) #23	VSTM5 (ENSPSMG00000021436) #24	ENSPSMG00000021429	ENSPSMG00000021414	HEPHL1 (ENSPSMG00000021408) #26	PANX1 (ENSPSMG00000021384) #27	IZUMO1R (ENSPSMG00000021373) #28	GPR83 (ENSPSMG00000021362) #29	ENSPSMG00000021347	MRE11 (ENSPSMG00000021306) #30	ANKRD49 (ENSPSMG00000021206) #31	C11orf97 (ENSPSMG00000021201) #32	FUT4 (ENSPSMG00000021197) #33	PIWIL4 (ENSPSMG00000021185) #34	AMOTL1 (ENSPSMG00000021101) #35
Mouse lemur	MODERN SPECIES	27	CTSC (ENSMICG00000002445)	GRM5 (ENSMICG00000002451)	TYR (ENSMICG00000037850)	NOX4 (ENSMICG00000014398)	ENSMICG00000042150 ##11	ENSMICG00000013580	NAALAD2 (ENSMICG00000015630) #11	ENSMICG00000015646 #12	ENSMICG00000031389 #14	MTNR1B (ENSMICG00000043189) #16	SLC36A4 (ENSMICG00000033063) #17	DEUP1 (ENSMICG00000017876) #18	SMCO4 (ENSMICG00000017877) #19	CEP295 (ENSMICG00000017878) #20	TAF1D (ENSMICG00000034947) #21	C11orf54 (ENSMICG00000028510) #22	ENSMICG00000014697 #23	VSTM5 (ENSMICG00000045625) #24	HEPHL1 (ENSMICG00000006401) #26	PANX1 (ENSMICG00000006408) #27	IZUMO1R (ENSMICG00000031112) #28	GPR83 (ENSMICG00000028902) #29	ENSMICG00000027455 #30	ANKRD49 (ENSMICG00000013505) #31	C11orf97 (ENSMICG00000043866) #32	FUT4 (ENSMICG00000043071) #33	PIWIL4 (ENSMICG00000006375) #34	ENSMICG00000041717	AMOTL1 (ENSMICG00000001878) #35	ENSMICG00000036230 #12	CWC15 (ENSMICG00000042790) #36
Bushbaby	MODERN SPECIES	116	GRM5 (ENSOGAG00000003814)	ENSOGAG00000024204	NOX4 (ENSOGAG00000012261)	FOLH1 (ENSOGAG00000002014) ##11	NAALAD2 (ENSOGAG00000011836) #11	CHORDC1 (ENSOGAG00000003523) #12	ENSOGAG00000030993	ENSOGAG00000015055	FAT3 (ENSOGAG00000033165) #14	MTNR1B (ENSOGAG00000031018) #16	SLC36A4 (ENSOGAG00000006967) #17	DEUP1 (ENSOGAG00000007123) #18	SMCO4 (ENSOGAG00000016748) #19	CEP295 (ENSOGAG00000002516) #20	ENSOGAG00000002521 #21	C11orf54 (ENSOGAG00000002523) #22	MED17 (ENSOGAG00000002525) #23	VSTM5 (ENSOGAG00000030661) #24	ENSOGAG00000026605	ENSOGAG00000033509	ENSOGAG00000034157	HEPHL1 (ENSOGAG00000015952) #26	PANX1 (ENSOGAG00000015294) #27	IZUMO1R (ENSOGAG00000002522) #28	GPR83 (ENSOGAG00000002520) #29	MRE11 (ENSOGAG00000012154) #30	ANKRD49 (ENSOGAG00000012155) #31	C11orf97 (ENSOGAG00000033264) #32	FUT4 (ENSOGAG00000025107) #33	PIWIL4 (ENSOGAG00000012156) #34	AMOTL1 (ENSOGAG00000003989) #35
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Glires	ANCESTRAL SPECIES	1	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Lagomorpha	ANCESTRAL SPECIES	5	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Rabbit	MODERN SPECIES		FOLH1 (ENSOCUG00000026120) ##11	TRIM77 (ENSOCUG00000026390)	ENSOCUG00000008705	ENSOCUG00000027036	ENSOCUG00000011049 #8	ENSOCUG00000036248	NAALAD2 (ENSOCUG00000014137) #11	ENSOCUG00000014147 #12	ENSOCUG00000023399	FAT3 (ENSOCUG00000007427) #14	MTNR1B (ENSOCUG00000008196) #16	SLC36A4 (ENSOCUG00000000649) #17	DEUP1 (ENSOCUG00000000199) #18	CEP295 (ENSOCUG00000029678) #20	ENSOCUG00000001096 #21	C11orf54 (ENSOCUG00000012810) #22	MED17 (ENSOCUG00000012818) #23	VSTM5 (ENSOCUG00000026554) #24	ENSOCUG00000029520	HEPHL1 (ENSOCUG00000009466) #26	PANX1 (ENSOCUG00000009473) #27	IZUMO1R (ENSOCUG00000013431) #28	GPR83 (ENSOCUG00000015502) #29	MRE11 (ENSOCUG00000014899) #30	ANKRD49 (ENSOCUG00000014912) #31	ENSOCUG00000033194	C11orf97 (ENSOCUG00000034472) #32	FUT4 (ENSOCUG00000014204) #33	PIWIL4 (ENSOCUG00000002860) #34	AMOTL1 (ENSOCUG00000001078) #35	CWC15 (ENSOCUG00000001629) #36
Pika	MODERN SPECIES	3920																C11orf54 (ENSOPRG00000000752) #22
Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000169594	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Rodentia_B	ANCESTRAL SPECIES	23						ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000169594	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Kangaroo rat	MODERN SPECIES	433										Fat3 (ENSDORG00000024314) #14	Mtnr1b (ENSDORG00000026210) #16	ENSDORG00000002749	Slc36a4 (ENSDORG00000027198) #17	Deup1 (ENSDORG00000011685) #18	Smco4 (ENSDORG00000001107) #19	4931406C07Rik (ENSDORG00000005004) #22	Med17 (ENSDORG00000005005) #23	Vstm5 (ENSDORG00000004620) #24	Hephl1 (ENSDORG00000005176) #26	ENSDORG00000028004	Izumo1r (ENSDORG00000005007) #28	Gpr83 (ENSDORG00000004374) #29	ENSDORG00000004828 #30	Iws1 (ENSDORG00000007385)	Myo7b (ENSDORG00000015044)	Gpr17 (ENSDORG00000015052)	Lims2 (ENSDORG00000015051)	Wdr33 (ENSDORG00000023513)	Polr2d (ENSDORG00000026897)	Ammecr1l (ENSDORG00000028104)	Sap130 (ENSDORG00000015563)
Myomorpha	ANCESTRAL SPECIES	23						ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Muroidea	ANCESTRAL SPECIES	29						ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Upper Galilee mountains blind mole rat	MODERN SPECIES	1827													Deup1 (ENSNGAG00000015010) #18	Smco4 (ENSNGAG00000019710) #19	Cep295 (ENSNGAG00000020811) #20	4931406C07Rik (ENSNGAG00000019210) #22	Med17 (ENSNGAG00000005765) #23	Vstm5 (ENSNGAG00000008846) #24	Hephl1 (ENSNGAG00000012499) #26	ENSNGAG00000004656	Panx1 (ENSNGAG00000014760) #27	Izumo1r (ENSNGAG00000009610) #28	Gpr83 (ENSNGAG00000015036) #29	Mre11a (ENSNGAG00000010330) #30	Ankrd49 (ENSNGAG00000012789) #31	1700012B09Rik (ENSNGAG00000013078) #32	Piwil4 (ENSNGAG00000022297) #34	Amotl1 (ENSNGAG00000012913) #35	Cwc15 (ENSNGAG00000016450) #36	Kdm4d (ENSNGAG00000019223) #37	Endod1 (ENSNGAG00000019861)
Muroidea_A	ANCESTRAL SPECIES	23	ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000183005.b.c.a	ENSGT00940000160844.a	ENSGT00950000183005.b.c.b	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Cricetidae	DUPLICATION
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00940000154131.f.a.a.b	ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000183005.b.c.a	ENSGT00940000160844.a	ENSGT00950000183005.b.c.b	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214.m #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Cricetidae_B	ANCESTRAL SPECIES	61		ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000183005.b.c.a	ENSGT00940000160844.a	ENSGT00950000183005.b.c.b	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214.m #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Northern American deer mouse	MODERN SPECIES	20	ENSPEMG00000009529	ENSPEMG00000004149	Mbd3l1 (ENSPEMG00000009423)	Zfp558 (ENSPEMG00000025515)	ENSPEMG00000002125	Naalad2 (ENSPEMG00000018071) #11	Chordc1 (ENSPEMG00000030600) #12	ENSPEMG00000031155	Fat3 (ENSPEMG00000013197) #14	Mtnr1b (ENSPEMG00000000316) #16	Slc36a4 (ENSPEMG00000023886) #17	Deup1 (ENSPEMG00000016493) #18	Smco4 (ENSPEMG00000027427) #19	Cep295 (ENSPEMG00000023772) #20	Taf1d (ENSPEMG00000023691) #21	4931406C07Rik (ENSPEMG00000023421) #22	Med17 (ENSPEMG00000024047) #23	Vstm5 (ENSPEMG00000028348) #24	ENSPEMG00000002357	Hephl1 (ENSPEMG00000021631) #26	Panx1 (ENSPEMG00000010979) #27	Izumo1r (ENSPEMG00000021678) #28	Gpr83 (ENSPEMG00000022377) #29	ENSPEMG00000030623	Mre11a (ENSPEMG00000023250) #30	1700012B09Rik (ENSPEMG00000012698) #32	ENSPEMG00000025171 #33	Piwil4 (ENSPEMG00000023859) #34	Amotl1 (ENSPEMG00000021905) #35	Cwc15 (ENSPEMG00000021432) #36	Kdm4d (ENSPEMG00000001845) #37
Prairie vole	MODERN SPECIES	13	ENSMOCG00000004665	Or1m1 (ENSMOCG00000006062)	ENSMOCG00000006310	Zfp558 (ENSMOCG00000018648)	Naalad2 (ENSMOCG00000004722) #11	Chordc1 (ENSMOCG00000002318) #12	ENSMOCG00000016118	Fat3 (ENSMOCG00000011364) #14	Mtnr1b (ENSMOCG00000007650) #16	Slc36a4 (ENSMOCG00000018384) #17	Deup1 (ENSMOCG00000020791) #18	Smco4 (ENSMOCG00000006274) #19	ENSMOCG00000021789	Cep295 (ENSMOCG00000021770) #20	Taf1d (ENSMOCG00000014011) #21	4931406C07Rik (ENSMOCG00000012170) #22	Med17 (ENSMOCG00000018802) #23	Vstm5 (ENSMOCG00000012686) #24	ENSMOCG00000015072	ENSMOCG00000021818	Alkbh8 (ENSMOCG00000019349)	Cwf19l2 (ENSMOCG00000010389)	Endod1 (ENSMOCG00000016035)	Sesn3 (ENSMOCG00000013595)	Fam76b (ENSMOCG00000001551)	Cep57 (ENSMOCG00000005014)	Mtmr2 (ENSMOCG00000009930)	Maml2 (ENSMOCG00000021568)	ENSMOCG00000019222	Ccdc82 (ENSMOCG00000019062)	Jrkl (ENSMOCG00000004889)
Cricetinae	ANCESTRAL SPECIES	45							ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214.m #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Chinese hamster chok1gshd	MODERN SPECIES	310					Naalad2 (ENSCGRG00001017192) #11	Chordc1 (ENSCGRG00001004673) #12	ENSCGRG00001007587	Fat3 (ENSCGRG00001016740) #14	Mtnr1b (ENSCGRG00001017947) #16	Slc36a4 (ENSCGRG00001005789) #17	Deup1 (ENSCGRG00001012085) #18	Smco4 (ENSCGRG00001013247) #19	ENSCGRG00001018019	Cep295 (ENSCGRG00001000538) #20	Taf1d (ENSCGRG00001004962) #21	4931406C07Rik (ENSCGRG00001008949) #22	MED17 (ENSCGRG00001017473) #23	Vstm5 (ENSCGRG00001006156) #24	Hephl1 (ENSCGRG00001014172) #26	PANX (ENSCGRG00001016361) #27	Izumo1r (ENSCGRG00001016589) #28	Gpr83 (ENSCGRG00001018677) #29	Mre11a (ENSCGRG00001006581) #30	Ankrd49 (ENSCGRG00001014107) #31	1700012B09Rik (ENSCGRG00001015499) #32	Fut4 (ENSCGRG00001013612) #33	Piwil4 (ENSCGRG00001017873) #34	Amotl1 (ENSCGRG00001011579) #35	Cwc15 (ENSCGRG00001013337) #36	Kdm4d (ENSCGRG00001013157) #37
Golden Hamster	MODERN SPECIES	778									Naalad2 (ENSMAUG00000008805) #11	Chordc1 (ENSMAUG00000012157) #12	Fat3 (ENSMAUG00000007614) #14	Slc36a4 (ENSMAUG00000001281) #17	Deup1 (ENSMAUG00000001957) #18	Smco4 (ENSMAUG00000000425) #19	Taf1d (ENSMAUG00000002515) #21	4931406C07Rik (ENSMAUG00000000356) #22	Med17 (ENSMAUG00000000493) #23	Vstm5 (ENSMAUG00000000333) #24	Hephl1 (ENSMAUG00000017278) #26	ENSMAUG00000015499 #27	ENSMAUG00000015032	Izumo1r (ENSMAUG00000018564) #28	Gpr83 (ENSMAUG00000017943) #29	ENSMAUG00000016290 #30	Ankrd49 (ENSMAUG00000014988) #31	1700012B09Rik (ENSMAUG00000014010) #32	ENSMAUG00000015824	Fut4 (ENSMAUG00000015849) #33	Piwil4 (ENSMAUG00000011382) #34	Amotl1 (ENSMAUG00000012162) #35	Cwc15 (ENSMAUG00000011686) #36
Cricetidae	ANCESTRAL SPECIES																	ENSGT00390000017214.n #22
Cricetidae_B	ANCESTRAL SPECIES																	ENSGT00390000017214.n #22
Northern American deer mouse	MODERN SPECIES		Ube3a (ENSPEMG00000021010)	Atp10a (ENSPEMG00000020854)	Gabrb3 (ENSPEMG00000023767)	Gabra5 (ENSPEMG00000019839)	Gabrg3 (ENSPEMG00000019431)	Oca2 (ENSPEMG00000020098)	Herc2 (ENSPEMG00000019120)	Nipa1 (ENSPEMG00000011557)	Nipa2 (ENSPEMG00000028381)	Cyfip1 (ENSPEMG00000020064)	Tubgcp5 (ENSPEMG00000017749)	Siglech (ENSPEMG00000016963)	Luzp2 (ENSPEMG00000019695)	ENSPEMG00000028728	ENSPEMG00000019594	ENSPEMG00000028549 #22	ENSPEMG00000013216	ENSPEMG00000011562	ENSPEMG00000022031	ENSPEMG00000022662	Uevld (ENSPEMG00000012328)	Misfa (ENSPEMG00000021845)	ENSPEMG00000021660	ENSPEMG00000023153	Tmem86a (ENSPEMG00000024287)	Ptpn5 (ENSPEMG00000022553)	ENSPEMG00000021299	ENSPEMG00000022426	Mrgprx1 (ENSPEMG00000007777)	ENSPEMG00000025968	ENSPEMG00000027080
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000183005.b.c.a	ENSGT00940000160844.a	ENSGT00950000183005.b.c.b	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Mus	ANCESTRAL SPECIES	4	ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000183005.b.c.a	ENSGT00940000160844.a	ENSGT00950000183005.b.c.b	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000183005.b.c.a	ENSGT00940000160844.a	ENSGT00950000183005.b.c.b	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000183005.b.c.a	ENSGT00940000160844.a	ENSGT00950000183005.b.c.b	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Mus_C	ANCESTRAL SPECIES	8	ENSGT00440000039287	ENSGT00950000183005.b.c.a	ENSGT00940000160844.a	ENSGT00950000183005.b.c.b	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000153052.c.b.b.b.d.a.a	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37	ENSGT01030000234592.B
Steppe mouse	MODERN SPECIES	3318	Zfp558 (ENSMSIG00000014968)	Naalad2 (ENSMSIG00000014984) #11	Mbd3l2 (ENSMSIG00000015109)	Ubtfl1 (ENSMSIG00000015135) #7	Chordc1 (ENSMSIG00000015139) #12	ENSMSIG00000015167	ENSMSIG00000015180	ENSMSIG00000015183	Fat3 (ENSMSIG00000015207) #14	Mtnr1b (ENSMSIG00000015621) #16	Slc36a4 (ENSMSIG00000015623) #17	Deup1 (ENSMSIG00000015751) #18	ENSMSIG00000015880 #19	Cep295 (ENSMSIG00000015917) #20	Taf1d (ENSMSIG00000016165) #21	4931406C07Rik (ENSMSIG00000016204) #22	Med17 (ENSMSIG00000016253) #23	Vstm5 (ENSMSIG00000016281) #24	Hephl1 (ENSMSIG00000016306) #26	Panx1 (ENSMSIG00000016343) #27	Izumo1r (ENSMSIG00000016359) #28	Gpr83 (ENSMSIG00000016567) #29	ENSMSIG00000016588	Mre11a (ENSMSIG00000016606) #30	Ankrd49 (ENSMSIG00000016701) #31	1700012B09Rik (ENSMSIG00000016716) #32	Fut4 (ENSMSIG00000016738) #33	Piwil4 (ENSMSIG00000016745) #34	Amotl1 (ENSMSIG00000016862) #35	Cwc15 (ENSMSIG00000017024) #36	ENSMSIG00000017048 #37
spretus	MODERN SPECIES	18	Or1m1 (MGP_SPRETEiJ_G0032930)	MGP_SPRETEiJ_G0032929	Mbd3l1 (MGP_SPRETEiJ_G0032928)	Zfp558 (MGP_SPRETEiJ_G0032927)	Mbd3l2 (MGP_SPRETEiJ_G0032926)	Ubtfl1 (MGP_SPRETEiJ_G0032925) #7	Naalad2 (MGP_SPRETEiJ_G0032924) #11	Chordc1 (MGP_SPRETEiJ_G0032923) #12	MGP_SPRETEiJ_G0032922	Fat3 (MGP_SPRETEiJ_G0032921) #14	MGP_SPRETEiJ_G0032920 #16	Slc36a4 (MGP_SPRETEiJ_G0032919) #17	Deup1 (MGP_SPRETEiJ_G0032918) #18	Smco4 (MGP_SPRETEiJ_G0032917) #19	Cep295 (MGP_SPRETEiJ_G0032916) #20	4931406C07Rik (MGP_SPRETEiJ_G0032915) #22	Med17 (MGP_SPRETEiJ_G0032914) #23	Vstm5 (MGP_SPRETEiJ_G0032913) #24	Hephl1 (MGP_SPRETEiJ_G0032912) #26	Panx1 (MGP_SPRETEiJ_G0032911) #27	Izumo1r (MGP_SPRETEiJ_G0032910) #28	MGP_SPRETEiJ_G0032909 #29	Mre11a (MGP_SPRETEiJ_G0032908) #30	Ankrd49 (MGP_SPRETEiJ_G0032907) #31	1700012B09Rik (MGP_SPRETEiJ_G0032906) #32	Fut4 (MGP_SPRETEiJ_G0032905) #33	Piwil4 (MGP_SPRETEiJ_G0032904) #34	Amotl1 (MGP_SPRETEiJ_G0032903) #35	Cwc15 (MGP_SPRETEiJ_G0032902) #36	Kdm4d (MGP_SPRETEiJ_G0032901) #37	Endod1 (MGP_SPRETEiJ_G0032900)
Mouse	MODERN SPECIES	18	Or1m1 (ENSMUSG00000054141)	Muc16 (ENSMUSG00000109564)	Mbd3l1 (ENSMUSG00000038691)	Zfp558 (ENSMUSG00000074500)	Mbd3l2 (ENSMUSG00000047508)	Ubtfl1 (ENSMUSG00000074502) #7	Naalad2 (ENSMUSG00000043943) #11	Chordc1 (ENSMUSG00000001774) #12	Fat3 (ENSMUSG00000074505) #14	Mtnr1b (ENSMUSG00000050901) #16	Slc36a4 (ENSMUSG00000043885) #17	Deup1 (ENSMUSG00000039977) #18	Smco4 (ENSMUSG00000058173) #19	Cep295 (ENSMUSG00000046111) #20	Taf1d (ENSMUSG00000031939) #21	4931406C07Rik (ENSMUSG00000031938) #22	Med17 (ENSMUSG00000031935) #23	Vstm5 (ENSMUSG00000031937) #24	Hephl1 (ENSMUSG00000031936) #26	Panx1 (ENSMUSG00000031934) #27	Izumo1r (ENSMUSG00000031933) #28	Gpr83 (ENSMUSG00000031932) #29	Mre11a (ENSMUSG00000031928) #30	Ankrd49 (ENSMUSG00000031931) #31	1700012B09Rik (ENSMUSG00000031927) #32	Fut4 (ENSMUSG00000049307) #33	Piwil4 (ENSMUSG00000036912) #34	Amotl1 (ENSMUSG00000013076) #35	Cwc15 (ENSMUSG00000004096) #36	Kdm4d (ENSMUSG00000053914) #37	Endod1 (ENSMUSG00000037419)
Ryukyu mouse	MODERN SPECIES	18	Or1m1 (MGP_CAROLIEiJ_G0031810)	MGP_CAROLIEiJ_G0031809	Mbd3l1 (MGP_CAROLIEiJ_G0031808)	Zfp558 (MGP_CAROLIEiJ_G0031807)	Mbd3l2 (MGP_CAROLIEiJ_G0031806)	Ubtfl1 (MGP_CAROLIEiJ_G0031805) #7	Naalad2 (MGP_CAROLIEiJ_G0031804) #11	Chordc1 (MGP_CAROLIEiJ_G0031803) #12	Fat3 (MGP_CAROLIEiJ_G0031802) #14	Mtnr1b (MGP_CAROLIEiJ_G0031801) #16	Slc36a4 (MGP_CAROLIEiJ_G0031800) #17	Deup1 (MGP_CAROLIEiJ_G0031799) #18	Smco4 (MGP_CAROLIEiJ_G0031798) #19	Cep295 (MGP_CAROLIEiJ_G0031797) #20	Taf1d (MGP_CAROLIEiJ_G0031796) #21	4931406C07Rik (MGP_CAROLIEiJ_G0031795) #22	Med17 (MGP_CAROLIEiJ_G0031794) #23	Vstm5 (MGP_CAROLIEiJ_G0031793) #24	Hephl1 (MGP_CAROLIEiJ_G0031792) #26	Panx1 (MGP_CAROLIEiJ_G0031791) #27	Izumo1r (MGP_CAROLIEiJ_G0031790) #28	Gpr83 (MGP_CAROLIEiJ_G0031789) #29	Mre11a (MGP_CAROLIEiJ_G0031788) #30	Ankrd49 (MGP_CAROLIEiJ_G0031787) #31	1700012B09Rik (MGP_CAROLIEiJ_G0031786) #32	Fut4 (MGP_CAROLIEiJ_G0031785) #33	Piwil4 (MGP_CAROLIEiJ_G0031784) #34	Amotl1 (MGP_CAROLIEiJ_G0031783) #35	Cwc15 (MGP_CAROLIEiJ_G0031782) #36	Kdm4d (MGP_CAROLIEiJ_G0031781) #37	Endod1 (MGP_CAROLIEiJ_G0031780)
Shrew mouse	MODERN SPECIES	1	Or1m1 (MGP_PahariEiJ_G0014686)	MGP_PahariEiJ_G0014685	Mbd3l1 (MGP_PahariEiJ_G0014684)	Zfp558 (MGP_PahariEiJ_G0014683)	Mbd3l2 (MGP_PahariEiJ_G0014682)	Ubtfl1 (MGP_PahariEiJ_G0014681) #7	MGP_PahariEiJ_G0014680	Chordc1 (MGP_PahariEiJ_G0014679) #12	Fat3 (MGP_PahariEiJ_G0014678) #14	Mtnr1b (MGP_PahariEiJ_G0014677) #16	Slc36a4 (MGP_PahariEiJ_G0014676) #17	Deup1 (MGP_PahariEiJ_G0014675) #18	Smco4 (MGP_PahariEiJ_G0014674) #19	Cep295 (MGP_PahariEiJ_G0014673) #20	MGP_PahariEiJ_G0014672 #21	4931406C07Rik (MGP_PahariEiJ_G0014671) #22	Med17 (MGP_PahariEiJ_G0014670) #23	Vstm5 (MGP_PahariEiJ_G0014669) #24	MGP_PahariEiJ_G0014668 #26	Panx1 (MGP_PahariEiJ_G0014667) #27	Izumo1r (MGP_PahariEiJ_G0014666) #28	Gpr83 (MGP_PahariEiJ_G0014665) #29	Mre11a (MGP_PahariEiJ_G0014664) #30	Ankrd49 (MGP_PahariEiJ_G0014663) #31	1700012B09Rik (MGP_PahariEiJ_G0014662) #32	Fut4 (MGP_PahariEiJ_G0014661) #33	Piwil4 (MGP_PahariEiJ_G0014660) #34	Amotl1 (MGP_PahariEiJ_G0014659) #35	Cwc15 (MGP_PahariEiJ_G0014658) #36	Kdm4d (MGP_PahariEiJ_G0014657) #37	Endod1 (MGP_PahariEiJ_G0014656)
Rat	MODERN SPECIES	18	ENSRNOG00000070900 #7	Naalad2 (ENSRNOG00000005955) #11	Chordc1 (ENSRNOG00000026643) #12	LOC120097744 (ENSRNOG00000064258)	LOC690235 (ENSRNOG00000024200)	ENSRNOG00000031660	Nek2l1 (ENSRNOG00000012119)	LOC689840 (ENSRNOG00000031522)	Fat3 (ENSRNOG00000011585) #14	Mtnr1b (ENSRNOG00000008972) #16	Slc36a4 (ENSRNOG00000011455) #17	Deup1 (ENSRNOG00000061247) #18	Smco4 (ENSRNOG00000011162) #19	Cep295 (ENSRNOG00000010999) #20	Taf1d (ENSRNOG00000010921) #21	C8h11orf54 (ENSRNOG00000010887) #22	Med17 (ENSRNOG00000010496) #23	Vstm5 (ENSRNOG00000010480) #24	ENSRNOG00000062992	Hephl1 (ENSRNOG00000056092) #26	Panx1 (ENSRNOG00000010060) #27	Izumo1r (ENSRNOG00000019894) #28	Gpr83 (ENSRNOG00000030318) #29	Mre11 (ENSRNOG00000009506) #30	Ankrd49 (ENSRNOG00000009233) #31	C8h11orf97 (ENSRNOG00000009203) #32	Fut4 (ENSRNOG00000009157) #33	Piwil4 (ENSRNOG00000009043) #34	Amotl1 (ENSRNOG00000008990) #35	Cwc15 (ENSRNOG00000008490) #36	LOC108348070 (ENSRNOG00000045905) #37
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.f #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000169594	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152 #37
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.f #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000169594	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084.u #36	ENSGT00940000162152 #37
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.f #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000169594	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084.u #36	ENSGT00940000162152 #37
Guinea pig	MODERN SPECIES	40	CTSC (ENSCPOG00000014848)	GRM5 (ENSCPOG00000009056)	ENSCPOG00000039497	TYR (ENSCPOG00000010608)	NOX4 (ENSCPOG00000040335)	FOLH1 (ENSCPOG00000003797) ##11	NAALAD2 (ENSCPOG00000038440) #11	CHORDC1 (ENSCPOG00000022614) #12	ENSCPOG00000010626 #14	MTNR1B (ENSCPOG00000010637) #16	SLC36A4 (ENSCPOG00000036098) #17	DEUP1 (ENSCPOG00000011016) #18	SMCO4 (ENSCPOG00000032286) #19	CEP295 (ENSCPOG00000032006) #20	TAF1D (ENSCPOG00000002426) #21	C11orf54 (ENSCPOG00000014146) #22	MED17 (ENSCPOG00000014149) #23	VSTM5 (ENSCPOG00000024881) #24	HEPHL1 (ENSCPOG00000004098) #26	PANX1 (ENSCPOG00000039148) #27	IZUMO1R (ENSCPOG00000011657) #28	GPR83 (ENSCPOG00000039200) #29	MRE11 (ENSCPOG00000014563) #30	ANKRD49 (ENSCPOG00000030391) #31	C11orf97 (ENSCPOG00000031459) #32	FUT4 (ENSCPOG00000000069) #33	PIWIL4 (ENSCPOG00000000070) #34	AMOTL1 (ENSCPOG00000006241) #35	CWC15 (ENSCPOG00000006249) #36	KDM4D (ENSCPOG00000006256) #37
Hystricomorpha_b	ANCESTRAL SPECIES	5	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.f #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000169594	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31
Long-tailed chinchilla	MODERN SPECIES	121	ENSCLAG00000014570	TYR (ENSCLAG00000016284)	ENSCLAG00000013267	NOX4 (ENSCLAG00000014011)	FOLH1 (ENSCLAG00000014594) ##11	NAALAD2 (ENSCLAG00000012474) #11	ENSCLAG00000014963 #12	FAT3 (ENSCLAG00000013669) #14	ENSCLAG00000012677	MTNR1B (ENSCLAG00000012055) #16	SLC36A4 (ENSCLAG00000015872) #17	DEUP1 (ENSCLAG00000013832) #18	SMCO4 (ENSCLAG00000011932) #19	CEP295 (ENSCLAG00000014683) #20	TAF1D (ENSCLAG00000014698) #21	C11orf54 (ENSCLAG00000017272) #22	MED17 (ENSCLAG00000017202) #23	VSTM5 (ENSCLAG00000016423) #24	HEPHL1 (ENSCLAG00000015721) #26	PANX1 (ENSCLAG00000014612) #27	IZUMO1R (ENSCLAG00000015110) #28	ENSCLAG00000013252	GPR83 (ENSCLAG00000013629) #29	ENSCLAG00000013392 #30	ANKRD49 (ENSCLAG00000015054) #31
Degu	MODERN SPECIES	250								ENSODEG00000018835	ENSODEG00000002534	FAT3 (ENSODEG00000002606) #14	MTNR1B (ENSODEG00000002125) #16	SLC36A4 (ENSODEG00000002145) #17	DEUP1 (ENSODEG00000002198) #18	SMCO4 (ENSODEG00000018804) #19	TAF1D (ENSODEG00000002225) #21	C11orf54 (ENSODEG00000002265) #22	MED17 (ENSODEG00000002353) #23	VSTM5 (ENSODEG00000002406) #24	ENSODEG00000002422	HEPHL1 (ENSODEG00000002492) #26	ENSODEG00000000644 #27	ENSODEG00000000623	IZUMO1R (ENSODEG00000000695) #28	GPR83 (ENSODEG00000000724) #29	ENSODEG00000001221 #31	ENSODEG00000001233
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000000730	ENSHGLG00000047307	FOLH1 (ENSHGLG00000005991) ##11	ENSHGLG00000020460	UBTFL1 (ENSHGLG00000034220) #7	ENSHGLG00000003627	ENSHGLG00000002890 #11	ENSHGLG00000007922 #12	ENSHGLG00000006607	ENSHGLG00000050821	FAT3 (ENSHGLG00000010388) #14	ENSHGLG00000044735 #16	SLC36A4 (ENSHGLG00000044885) #17	ENSHGLG00000020910	ENSHGLG00000014481 #20	C11orf54 (ENSHGLG00000012597) #22	TAF1D (ENSHGLG00000008795) #21	MED17 (ENSHGLG00000006191) #23	VSTM5 (ENSHGLG00000007424) #24	ENSHGLG00000048701	ENSHGLG00000049421	HEPHL1 (ENSHGLG00000005416) #26	PANX1 (ENSHGLG00000007682) #27	ENSHGLG00000050118	IZUMO1R (ENSHGLG00000008985) #28	ENSHGLG00000019637 #37	GPR83 (ENSHGLG00000018711) #29	MRE11A (ENSHGLG00000015754) #30	ANKRD49 (ENSHGLG00000014039) #31	ENSHGLG00000014136 #32	FUT4 (ENSHGLG00000005608) #33
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000163440	ENSGT00940000160005.A.n #8	ENSGT00940000162409	ENSGT00940000163419	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.f #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152.g.a #37	ENSGT00940000162152.g.b #37
Marmotini	ANCESTRAL SPECIES	20					ENSGT00940000160005.A.n #8	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.f #12	ENSGT00940000178162	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152.g.a #37	ENSGT00940000162152.g.b #37
Marmotini_b	ANCESTRAL SPECIES	155								ENSGT00940000178162	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT00940000162152.g.a #37	ENSGT00940000162152.g.b #37
Arctic ground squirrel	MODERN SPECIES	166									ENSUPAG00010000873	FAT3 (ENSUPAG00010000879) #14	MTNR1B (ENSUPAG00010000937) #16	SLC36A4 (ENSUPAG00010000949) #17	DEUP1 (ENSUPAG00010000984) #18	CEP295 (ENSUPAG00010001137) #20	TAF1D (ENSUPAG00010001478) #21	C11orf54 (ENSUPAG00010001486) #22	MED17 (ENSUPAG00010001622) #23	VSTM5 (ENSUPAG00010001672) #24	HEPHL1 (ENSUPAG00010001691) #26	PANX1 (ENSUPAG00010001730) #27	ENSUPAG00010001744	IZUMO1R (ENSUPAG00010001756) #28	GPR83 (ENSUPAG00010001763) #29	MRE11 (ENSUPAG00010001790) #30	ANKRD49 (ENSUPAG00010001896) #31	C11orf97 (ENSUPAG00010001935) #32	FUT4 (ENSUPAG00010001953) #33	PIWIL4 (ENSUPAG00010001982) #34	AMOTL1 (ENSUPAG00010002044) #35	CWC15 (ENSUPAG00010002076) #36	KDM4D (ENSUPAG00010002086) #37
Squirrel	MODERN SPECIES	274									FAT3 (ENSSTOG00000008783) #14	MTNR1B (ENSSTOG00000008849) #16	SLC36A4 (ENSSTOG00000008854) #17	DEUP1 (ENSSTOG00000011722) #18	SMCO4 (ENSSTOG00000008008) #19	CEP295 (ENSSTOG00000008015) #20	TAF1D (ENSSTOG00000030516) #21	C11orf54 (ENSSTOG00000008061) #22	MED17 (ENSSTOG00000008098) #23	VSTM5 (ENSSTOG00000025751) #24	ENSSTOG00000033997	HEPHL1 (ENSSTOG00000026323) #26	PANX1 (ENSSTOG00000006851) #27	ENSSTOG00000032468	IZUMO1R (ENSSTOG00000032389) #28	GPR83 (ENSSTOG00000006859) #29	MRE11 (ENSSTOG00000006869) #30	ANKRD49 (ENSSTOG00000028263) #31	C11orf97 (ENSSTOG00000032509) #32	FUT4 (ENSSTOG00000006910) #33	ENSSTOG00000006932 #34	AMOTL1 (ENSSTOG00000002462) #35	CWC15 (ENSSTOG00000002485) #36
Alpin marmot	MODERN SPECIES	25				ENSMMMG00000004728 #8	NAALAD2 (ENSMMMG00000004701) #11	CHORDC1 (ENSMMMG00000004692) #12	ENSMMMG00000004674	ENSMMMG00000004671	FAT3 (ENSMMMG00000004600) #14	MTNR1B (ENSMMMG00000004580) #16	SLC36A4 (ENSMMMG00000004555) #17	DEUP1 (ENSMMMG00000004469) #18	SMCO4 (ENSMMMG00000004447) #19	CEP295 (ENSMMMG00000004214) #20	TAF1D (ENSMMMG00000004115) #21	C11orf54 (ENSMMMG00000004067) #22	MED17 (ENSMMMG00000004045) #23	VSTM5 (ENSMMMG00000004034) #24	HEPHL1 (ENSMMMG00000003995) #26	PANX1 (ENSMMMG00000003980) #27	IZUMO1R (ENSMMMG00000003960) #28	GPR83 (ENSMMMG00000003939) #29	MRE11 (ENSMMMG00000003822) #30	ANKRD49 (ENSMMMG00000003801) #31	C11orf97 (ENSMMMG00000003791) #32	FUT4 (ENSMMMG00000003775) #33	PIWIL4 (ENSMMMG00000003741) #34	AMOTL1 (ENSMMMG00000003717) #35	CWC15 (ENSMMMG00000003695) #36	ENSMMMG00000003692 #37	ENSMMMG00000003680 #37
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005022908	ENSSVLG00005022933	ENSSVLG00005022975 #8	ENSSVLG00005023136 #8	ENSSVLG00005023329	NAALAD2 (ENSSVLG00005023397) #11	ENSSVLG00005023505 #12	FAT3 (ENSSVLG00005023682) #14	MTNR1B (ENSSVLG00005023956) #16	SLC36A4 (ENSSVLG00005023972) #17	ENSSVLG00005024017	DEUP1 (ENSSVLG00005024034) #18	SMCO4 (ENSSVLG00005024149) #19	CEP295 (ENSSVLG00005024179) #20	TAF1D (ENSSVLG00005008868) #21	C11orf54 (ENSSVLG00005008945) #22	MED17 (ENSSVLG00005009035) #23	VSTM5 (ENSSVLG00005009102) #24	HEPHL1 (ENSSVLG00005009168) #26	PANX1 (ENSSVLG00005009275) #27	IZUMO1R (ENSSVLG00005009300) #28	GPR83 (ENSSVLG00005009337) #29	MRE11 (ENSSVLG00005009395) #30	ENSSVLG00005009454	ANKRD49 (ENSSVLG00005009488) #31	C11orf97 (ENSSVLG00005009503) #32	FUT4 (ENSSVLG00005009540) #33	PIWIL4 (ENSSVLG00005009583) #34	AMOTL1 (ENSSVLG00005009738) #35	CWC15 (ENSSVLG00005009802) #36	KDM4D (ENSSVLG00005009838) #37
Tree shrew	MODERN SPECIES	7750																ENSTBEG00000007819 #22
Atlantogenata	ANCESTRAL SPECIES	35	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT00940000160005.B #9	ENSGT00940000160005.A #8	ENSGT00940000163858 #7	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT01030000234590.A.a.b #25	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT01100000263557.B	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00390000001015	ENSGT00940000160895	ENSGT00510000050180
Xenarthra	ANCESTRAL SPECIES	612											ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24
Sloth	MODERN SPECIES	5377														ENSCHOG00000013419 ##20	TAF1D (ENSCHOG00000013436) #21	C11orf54 (ENSCHOG00000013446) #22
Armadillo	MODERN SPECIES	3404									ENSDNOG00000030964	SLC36A4 (ENSDNOG00000040589) #17	DEUP1 (ENSDNOG00000003919) #18	SMCO4 (ENSDNOG00000014946) #19	ENSDNOG00000031219	CEP295 (ENSDNOG00000004202) #20	TAF1D (ENSDNOG00000041284) #21	C11orf54 (ENSDNOG00000004224) #22	MED17 (ENSDNOG00000038310) #23	VSTM5 (ENSDNOG00000025124) #24
Afrotheria	ANCESTRAL SPECIES	153						ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT01030000234590.A.a.b #25	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000160895	ENSGT00510000050180
Afrotheria_a	ANCESTRAL SPECIES	146		ENSGT00940000163858 #7	ENSGT00940000160005.A.c #8	ENSGT00940000160005.B #9	ENSGT00940000160005.A.d.b #8	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162741.i.b #15	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A.e #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT01030000234590.A.a.b #25	ENSGT00940000155511	ENSGT00950000183022.a.a.a	ENSGT00940000162537	ENSGT00940000153313.A	ENSGT00510000048154	ENSGT00940000158872	ENSGT00940000156517	ENSGT00940000160895	ENSGT00510000050180
Elephant	MODERN SPECIES	340		ENSLAFG00000029491 #9	ENSLAFG00000028928 #8	NAALAD2 (ENSLAFG00000007972) #11	CHORDC1 (ENSLAFG00000017340) #12	ENSLAFG00000026935	ENSLAFG00000027345	FAT3 (ENSLAFG00000017223) #14	ENSLAFG00000025161 #15	MTNR1B (ENSLAFG00000028028) #16	SLC36A4 (ENSLAFG00000021548) #17	DEUP1 (ENSLAFG00000015716) #18	SMCO4 (ENSLAFG00000006995) #19	ENSLAFG00000020915 #20	TAF1D (ENSLAFG00000023200) #21	C11orf54 (ENSLAFG00000023184) #22	MED17 (ENSLAFG00000018587) #23	VSTM5 (ENSLAFG00000020501) #24	ENSLAFG00000030318 #25	HEPHL1 (ENSLAFG00000012664) #26	PANX1 (ENSLAFG00000011329) #27	IZUMO1R (ENSLAFG00000032394) #28	GPR83 (ENSLAFG00000016367) #29	MRE11 (ENSLAFG00000016373) #30	ANKRD49 (ENSLAFG00000003825) #31	FUT4 (ENSLAFG00000008415) #33	PIWIL4 (ENSLAFG00000008418) #34	AMOTL1 (ENSLAFG00000022009) #35	CWC15 (ENSLAFG00000004456) #36	KDM4D (ENSLAFG00000004460) #37	ENSLAFG00000028723 #37
Hyrax	MODERN SPECIES	4952															ENSPCAG00000007895 ##20	C11orf54 (ENSPCAG00000008003) #22	MED17 (ENSPCAG00000008048) #23	VSTM5 (ENSPCAG00000008104) #24
Tenrec	MODERN SPECIES	7351																C11orf54 (ENSETEG00000007229) #22
Marsupialia	ANCESTRAL SPECIES	5	ENSGT01040000240383.a.a.b.a.b.a.b	ENSGT01040000240383.a.a.b.a.a.a	ENSGT01040000240383.a.a.b.a.a.b	ENSGT01040000240383.b.b.b	ENSGT01040000240383.b.a.a.k.a	ENSGT01040000240383.b.a.a.l.a.b	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B	ENSGT00950000183168.A
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT01040000240383.a.a.b.b	ENSGT01040000240383.a.a.b.a.a.a	ENSGT01040000240383.a.a.b.a.a.b	ENSGT01040000240383.b.b.b	ENSGT01040000240383.b.a.a.k.a	ENSGT01040000240383.b.a.a.l.a.b	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981.j #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B	ENSGT00950000183168.A
Diprotodontia	ANCESTRAL SPECIES	11	ENSGT01040000240383.a.a.b.a.b.a.a.b	ENSGT01040000240383.a.a.b.a.b.a.a.a.b	ENSGT01040000240383.a.a.b.a.a.b	ENSGT01040000240383.b.b.b	ENSGT01040000240383.b.a.a.k.b	ENSGT01040000240383.a.a.b.b	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981.j #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B	ENSGT00950000183168.A
Diprotodontia_a	ANCESTRAL SPECIES	9	ENSGT01010000222320.a.a.a.a.e	ENSGT01010000222320.a.a.a.a.f	ENSGT01040000240383.b.b.a	ENSGT01040000240383.a.a.b.a.b.a.a.b	ENSGT01040000240383.a.a.b.a.b.a.a.a.b	ENSGT01040000240383.a.a.b.b.c.a	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981.j #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00950000183144.A.j #28	ENSGT00940000154336.d #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B	ENSGT00950000183168.A
Common wonbat	MODERN SPECIES	459							FAT3 (ENSVURG00010009960) #14	ENSVURG00010010016	ENSVURG00010010020	ENSVURG00010010023	SLC36A4 (ENSVURG00010010032) #17	DEUP1 (ENSVURG00010010055) #18	ENSVURG00010010135 #19	ENSVURG00010010145 #20	ENSVURG00010010253 #21	C11orf54 (ENSVURG00010010260) #22	MED17 (ENSVURG00010010274) #23	VSTM5 (ENSVURG00010010292) #24	HEPHL1 (ENSVURG00010010303) #26	PANX1 (ENSVURG00010010344) #27	IZUMO1R (ENSVURG00010010349) #28	GPR83 (ENSVURG00010010363) #29	MRE11 (ENSVURG00010010496) #30	ANKRD49 (ENSVURG00010010565) #31	C11orf97 (ENSVURG00010010576) #32	ENSVURG00010010592 #33	PIWIL4 (ENSVURG00010010619) #34	AMOTL1 (ENSVURG00010010648) #35	CWC15 (ENSVURG00010010692) #36	ENDOD1 (ENSVURG00010010700)	SESN3 (ENSVURG00010010715)
koala	MODERN SPECIES	86	ENSPCIG00000031052	ENSPCIG00000005080	ENSPCIG00000014796	ENSPCIG00000006841 #11	ENSPCIG00000036776 #11	CHORDC1 (ENSPCIG00000006836) #12	ENSPCIG00000020779	ENSPCIG00000034515	ENSPCIG00000031045 #14	MTNR1B (ENSPCIG00000003688) #16	ENSPCIG00000005509	SLC36A4 (ENSPCIG00000003665) #17	DEUP1 (ENSPCIG00000003590) #18	ENSPCIG00000003565 #19	ENSPCIG00000003418 #21	C11orf54 (ENSPCIG00000003405) #22	MED17 (ENSPCIG00000003395) #23	VSTM5 (ENSPCIG00000003391) #24	HEPHL1 (ENSPCIG00000012215) #26	PANX1 (ENSPCIG00000003374) #27	ENSPCIG00000003364	IZUMO1R (ENSPCIG00000003349) #28	GPR83 (ENSPCIG00000036706) #29	MRE11 (ENSPCIG00000009614) #30	ANKRD49 (ENSPCIG00000009610) #31	C11orf97 (ENSPCIG00000034457) #32	ENSPCIG00000030597 #33	PIWIL4 (ENSPCIG00000030600) #34	AMOTL1 (ENSPCIG00000001368) #35	CWC15 (ENSPCIG00000001348) #36	ENDOD1 (ENSPCIG00000001331)
Wallaby	MODERN SPECIES	8888																C11orf54 (ENSMEUG00000008536) #22
Tasmanian devil	MODERN SPECIES	2	OR8D1 (ENSSHAG00000011261)	ENSSHAG00000011107	ENSSHAG00000010870	ENSSHAG00000010047 #11	ENSSHAG00000009863 #12	ENSSHAG00000025058	FAT3 (ENSSHAG00000012153) #14	MTNR1B (ENSSHAG00000011264) #16	ENSSHAG00000023084	ENSSHAG00000010485	SLC36A4 (ENSSHAG00000010022) #17	DEUP1 (ENSSHAG00000007373) #18	SMCO4 (ENSSHAG00000024792) #19	ENSSHAG00000006706 #20	ENSSHAG00000005874 #21	C11orf54 (ENSSHAG00000005435) #22	MED17 (ENSSHAG00000004223) #23	VSTM5 (ENSSHAG00000021368) #24	HEPHL1 (ENSSHAG00000018243) #26	PANX1 (ENSSHAG00000018175) #27	IZUMO1R (ENSSHAG00000029294) #28	GPR83 (ENSSHAG00000024803) #29	MRE11 (ENSSHAG00000017729) #30	ENSSHAG00000021016 #31	ENSSHAG00000028715 #32	FUT4 (ENSSHAG00000032130) #33	PIWIL4 (ENSSHAG00000017415) #34	AMOTL1 (ENSSHAG00000016815) #35	ENSSHAG00000016534 #36	ENDOD1 (ENSSHAG00000016362)	SESN3 (ENSSHAG00000016018)
Opossum	DUPLICATION
Opossum	MODERN SPECIES	3	ENSMODG00000042491 #12	ENSMODG00000042939	FAT3 (ENSMODG00000003108) #14	MTNR1B (ENSMODG00000001012) #16	ENSMODG00000050775	ENSMODG00000046229	SLC36A4 (ENSMODG00000000957) #17	ENSMODG00000024309	DEUP1 (ENSMODG00000000922) #18	ENSMODG00000000726	ENSMODG00000030044	ENSMODG00000000714 #20	ENSMODG00000042713	ENSMODG00000047013	ENSMODG00000008546 #21	ENSMODG00000000412 #22	MED17 (ENSMODG00000000383) #23	VSTM5 (ENSMODG00000045386) #24	HEPHL1 (ENSMODG00000000357) #26	PANX1 (ENSMODG00000000278) #27	ENSMODG00000041397	IZUMO1R (ENSMODG00000000260) #28	GPR83 (ENSMODG00000000236) #29	MRE11 (ENSMODG00000000231) #30	ANKRD49 (ENSMODG00000000222) #31	ENSMODG00000043171	ENSMODG00000028613 #32	FUT4 (ENSMODG00000024373) #33	PIWIL4 (ENSMODG00000000217) #34	AMOTL1 (ENSMODG00000000180) #35	ENSMODG00000000169 #36
Opossum	MODERN SPECIES	4	ENSMODG00000020589	ENSMODG00000024822	GRXCR1 (ENSMODG00000024820)	ATP8A1 (ENSMODG00000020583)	SHISA3 (ENSMODG00000020580)	ENSMODG00000024819	BEND4 (ENSMODG00000020579)	SLC30A9 (ENSMODG00000020577)	TMEM33 (ENSMODG00000020574)	PHOX2B (ENSMODG00000020573)	LIMCH1 (ENSMODG00000020570)	ENSMODG00000045721	UCHL1 (ENSMODG00000020568)	APBB2 (ENSMODG00000020566)	NSUN7 (ENSMODG00000020564)	ENSMODG00000020565 #22	ENSMODG00000038881	ENSMODG00000007003	CHRNA9 (ENSMODG00000020560)	N4BP2 (ENSMODG00000020559)	PDS5A (ENSMODG00000020557)	UBE2K (ENSMODG00000020556)	ENSMODG00000038421	SMIM14 (ENSMODG00000041423)	ENSMODG00000020549	LIAS (ENSMODG00000020554)	RPL9 (ENSMODG00000020553)	KLB (ENSMODG00000020550)	RFC1 (ENSMODG00000020548)	WDR19 (ENSMODG00000020546)	ENSMODG00000020543
Platypus	MODERN SPECIES	12	RAB38 (ENSOANG00000008872)	CTSC (ENSOANG00000043869)	GRM5 (ENSOANG00000008870)	TYR (ENSOANG00000008868)	NOX4 (ENSOANG00000008867)	FOLH1 (ENSOANG00000004606) ##11	NAALAD2 (ENSOANG00000004605) #11	CHORDC1 (ENSOANG00000043552) #12	FAT3 (ENSOANG00000011705) #14	ENSOANG00000042265	SLC36A4 (ENSOANG00000011707) #17	ENSOANG00000011708 #18	ENSOANG00000040404 #18	SMCO4 (ENSOANG00000045400) #19	ENSOANG00000011713 #21	C11orf54 (ENSOANG00000011715) #22	MED17 (ENSOANG00000011716) #23	VSTM5 (ENSOANG00000045898) #24	HEPHL1 (ENSOANG00000011719) #26	PANX1 (ENSOANG00000011723) #27	GPR83 (ENSOANG00000040634) #29	MRE11 (ENSOANG00000010399) #30	ANKRD49 (ENSOANG00000010402) #31	ENSOANG00000029843 #32	ENSOANG00000038002 #33	AMOTL1 (ENSOANG00000010403) #35	ENSOANG00000010404 #36	ENSOANG00000010405	ENSOANG00000010505	SESN3 (ENSOANG00000010503)	FAM76B (ENSOANG00000045559)
Sauria	ANCESTRAL SPECIES	2	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B
Archelosauria	ANCESTRAL SPECIES		ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b
Archosauria	ANCESTRAL SPECIES	2	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b
Aves	ANCESTRAL SPECIES		ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b	ENSGT00950000183168.A
Neognathae	ANCESTRAL SPECIES	1	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b	ENSGT00950000183168.A
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b	ENSGT00950000183168.A	ENSGT00940000159074
Anatidae	ANCESTRAL SPECIES	16	ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b	ENSGT00950000183168.A	ENSGT00940000159074
Pink-footed goose	MODERN SPECIES	69	CTSC (ENSABRG00000022653)	GRM5 (ENSABRG00000022656)	TYR (ENSABRG00000022662)	NOX4 (ENSABRG00000022666)	FOLH1 (ENSABRG00000022670) ##11	ENSABRG00000022672 #11	ENSABRG00000022673 #11	CHORDC1 (ENSABRG00000022674) #12	FAT3 (ENSABRG00000022682) #14	MTNR1B (ENSABRG00000022688) #16	SLC36A4 (ENSABRG00000022693) #17	DEUP1 (ENSABRG00000022695) #18	SMCO4 (ENSABRG00000022697) #19	ENSABRG00000022699 #20	TAF1D (ENSABRG00000022716) #21	C11orf54 (ENSABRG00000022718) #22	MED17 (ENSABRG00000022726) #23	VSTM5 (ENSABRG00000022741) #24	ENSABRG00000022742	ENSABRG00000022743 #25	ENSABRG00000022745	ENSABRG00000022746	PANX1 (ENSABRG00000022749) #27	GPR83 (ENSABRG00000022752) #29	MRE11 (ENSABRG00000022756) #30	ANKRD49 (ENSABRG00000022759) #31	C11orf97 (ENSABRG00000022763) #32	FUT4 (ENSABRG00000022765) #33	AMOTL1 (ENSABRG00000022773) #35	CWC15 (ENSABRG00000022800) #36	ENDOD1 (ENSABRG00000022805)
Duck	MODERN SPECIES		RAB38 (ENSAPLG00000009310)	CTSC (ENSAPLG00000009381)	ENSAPLG00000031170	GRM5 (ENSAPLG00000009575)	TYR (ENSAPLG00000012676)	NOX4 (ENSAPLG00000012543)	FOLH1 (ENSAPLG00000012440) ##11	NAALAD2 (ENSAPLG00000012368) #11	CHORDC1 (ENSAPLG00000000579) #12	FAT3 (ENSAPLG00000013451) #14	MTNR1B (ENSAPLG00000014060) #16	SLC36A4 (ENSAPLG00000014091) #17	DEUP1 (ENSAPLG00000014531) #18	ENSAPLG00000014794 #20	ENSAPLG00000024522 #21	C11orf54 (ENSAPLG00000014882) #22	MED17 (ENSAPLG00000015087) #23	VSTM5 (ENSAPLG00000015398) #24	ENSAPLG00000015429	ENSAPLG00000015524 #25	HEPHL1 (ENSAPLG00000015713) #26	ENSAPLG00000027891	PANX1 (ENSAPLG00000016177) #27	MRE11 (ENSAPLG00000021936) #30	C11orf97 (ENSAPLG00000019178) #32	FUT4 (ENSAPLG00000019961) #33	AMOTL1 (ENSAPLG00000002742) #35	CWC15 (ENSAPLG00000003221) #36	ENDOD1 (ENSAPLG00000025860)	SESN3 (ENSAPLG00000003440)	FAM76B (ENSAPLG00000003717)
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981.a #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994.b #26	ENSGT00940000153972.A #27	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b	ENSGT00950000183168.A	ENSGT00940000159074
Japanese quail	MODERN SPECIES		CTSC (ENSCJPG00005004155)	GRM5 (ENSCJPG00005004152)	TYR (ENSCJPG00005004127)	NOX4 (ENSCJPG00005004115)	FOLH1 (ENSCJPG00005004111) ##11	NAALAD2 (ENSCJPG00005004108) #11	CHORDC1 (ENSCJPG00005004096) #12	ENSCJPG00005004093	FAT3 (ENSCJPG00005004054) #14	ENSCJPG00005004037	MTNR1B (ENSCJPG00005004035) #16	ENSCJPG00005004027 #17	DEUP1 (ENSCJPG00005004002) #18	ENSCJPG00005003994 #20	ENSCJPG00005003982 #21	C11orf54 (ENSCJPG00005003977) #22	MED17 (ENSCJPG00005003976) #23	VSTM5 (ENSCJPG00005003975) #24	ENSCJPG00005003974	ENSCJPG00005003973 #25	ENSCJPG00005003971	ENSCJPG00005003967 #26	PANX1 (ENSCJPG00005003965) #27	GPR83 (ENSCJPG00005003962) #29	MRE11 (ENSCJPG00005003960) #30	ANKRD49 (ENSCJPG00005003958) #31	C11orf97 (ENSCJPG00005003956) #32	FUT4 (ENSCJPG00005003953) #33	AMOTL1 (ENSCJPG00005003951) #35	CWC15 (ENSCJPG00005003933) #36	ENDOD1 (ENSCJPG00005003932)
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00940000157301.b	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981.a #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994.b #26	ENSGT00940000153972.A #27	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b	ENSGT00950000183168.A	ENSGT00940000159074
Turkey	MODERN SPECIES		ENSMGAG00000019758 #14	ENSMGAG00000015215 #14	ENSMGAG00000017245 #35	ENSMGAG00000015195 #33	C11orf97 (ENSMGAG00000017907) #32	PANX1 (ENSMGAG00000015199) #27	GPR83 (ENSMGAG00000015198) #29	ENSMGAG00000015197	ANKRD49 (ENSMGAG00000015196) #31	ENSMGAG00000015201 #25	ENSMGAG00000015200 #26	ENSMGAG00000015204 #23	ENSMGAG00000015203 #24	ENSMGAG00000015202	ENSMGAG00000015206 #21	C11orf54 (ENSMGAG00000015205) #22	ENSMGAG00000015214 #18	SMCO4 (ENSMGAG00000021417) #19	CWC15 (ENSMGAG00000015193) #36	ENDOD1 (ENSMGAG00000020832)	SESN3 (ENSMGAG00000015191)	FAM76B (ENSMGAG00000015189)	CEP57 (ENSMGAG00000015188)	MTMR2 (ENSMGAG00000015187)	MAML2 (ENSMGAG00000015186)	CCDC82 (ENSMGAG00000015184)	FGF9 (ENSMGAG00000021422)	MRPL57 (ENSMGAG00000015610)	ZDHHC20 (ENSMGAG00000015122)	ENSMGAG00000015124	ENSMGAG00000015123
Chicken	MODERN SPECIES		CTSC (ENSGALG00010007485)	GRM5 (ENSGALG00010007886)	ENSGALG00010007873	TYR (ENSGALG00010007864)	NOX4 (ENSGALG00010007357)	FOLH1 (ENSGALG00010007404) ##11	NAALAD2 (ENSGALG00010007392) #11	CHORDC1 (ENSGALG00010007375) #12	FAT3 (ENSGALG00010007920) #14	MTNR1B (ENSGALG00010009056) #16	SLC36A4 (ENSGALG00010009039) #17	DEUP1 (ENSGALG00010009012) #18	SMCO4 (ENSGALG00010008974) #19	ENSGALG00010008837 #20	ENSGALG00010008821 #21	C11orf54 (ENSGALG00010008793) #22	MED17 (ENSGALG00010008775) #23	VSTM5 (ENSGALG00010008739) #24	ENSGALG00010008694	TM4SF1a (ENSGALG00010008664) #25	HEPHL1 (ENSGALG00010008641) #26	ENSGALG00010009160	PANX1 (ENSGALG00010008580) #27	GPR83 (ENSGALG00010008529) #29	MRE11 (ENSGALG00010008516) #30	ANKRD49 (ENSGALG00010008492) #31	C11orf97 (ENSGALG00010008466) #32	FUT4 (ENSGALG00010009149) #33	AMOTL1 (ENSGALG00010008453) #35	CWC15 (ENSGALG00010008409) #36	ENDOD1 (ENSGALG00010008395)
Neognathae_b	ANCESTRAL SPECIES		ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b	ENSGT00950000183168.A
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000163982.sd.b	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b	ENSGT00950000183168.A
Great tit	MODERN SPECIES		CTSC (ENSPMJG00000000646)	GRM5 (ENSPMJG00000000632)	TYR (ENSPMJG00000000599)	NOX4 (ENSPMJG00000000571)	FOLH1 (ENSPMJG00000000554) ##11	NAALAD2 (ENSPMJG00000000533) #11	CHORDC1 (ENSPMJG00000000513) #12	FAT3 (ENSPMJG00000000168) #14	MTNR1B (ENSPMJG00000000122) #16	ENSPMJG00000000068	SLC36A4 (ENSPMJG00000017902) #17	DEUP1 (ENSPMJG00000017897) #18	SMCO4 (ENSPMJG00000017893) #19	ENSPMJG00000017889 #20	TAF1D (ENSPMJG00000017879) #21	C11orf54 (ENSPMJG00000017878) #22	MED17 (ENSPMJG00000017877) #23	VSTM5 (ENSPMJG00000017876) #24	ENSPMJG00000017875	ENSPMJG00000017874 #25	ENSPMJG00000017872	ENSPMJG00000017871	ENSPMJG00000017870	PANX1 (ENSPMJG00000017869) #27	GPR83 (ENSPMJG00000017868) #29	MRE11 (ENSPMJG00000017867) #30	ANKRD49 (ENSPMJG00000017866) #31	ENSPMJG00000017865	FUT4 (ENSPMJG00000017864) #33	AMOTL1 (ENSPMJG00000017863) #35	CWC15 (ENSPMJG00000017862) #36
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000163982.sd.b	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b	ENSGT00950000183168.A
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000163982.sd.b	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b	ENSGT00950000183168.A
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000163982.sd.b	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b	ENSGT00950000183168.A
Common canary	MODERN SPECIES	4	RAB38 (ENSSCAG00000003089)	CTSC (ENSSCAG00000003096)	GRM5 (ENSSCAG00000003123)	TYR (ENSSCAG00000003149)	NOX4 (ENSSCAG00000003176)	FOLH1 (ENSSCAG00000003270) ##11	NAALAD2 (ENSSCAG00000003286) #11	CHORDC1 (ENSSCAG00000003291) #12	FAT3 (ENSSCAG00000003312) #14	MTNR1B (ENSSCAG00000003497) #16	SLC36A4 (ENSSCAG00000003536) #17	DEUP1 (ENSSCAG00000003544) #18	SMCO4 (ENSSCAG00000003568) #19	ENSSCAG00000003573 #20	TAF1D (ENSSCAG00000003597) #21	C11orf54 (ENSSCAG00000003598) #22	MED17 (ENSSCAG00000003601) #23	VSTM5 (ENSSCAG00000003607) #24	ENSSCAG00000003611	ENSSCAG00000003613 #25	HEPHL1 (ENSSCAG00000003621) #26	PANX1 (ENSSCAG00000003636) #27	GPR83 (ENSSCAG00000003647) #29	MRE11 (ENSSCAG00000003648) #30	ANKRD49 (ENSSCAG00000003657) #31	ENSSCAG00000003659	FUT4 (ENSSCAG00000003662) #33	AMOTL1 (ENSSCAG00000003677) #35	CWC15 (ENSSCAG00000003798) #36	ENDOD1 (ENSSCAG00000003802)	SESN3 (ENSSCAG00000003813)
Zebra finch	MODERN SPECIES		RAB38 (ENSTGUG00000012909)	CTSC (ENSTGUG00000012906)	GRM5 (ENSTGUG00000012900)	TYR (ENSTGUG00000012899)	NOX4 (ENSTGUG00000012893)	FOLH1 (ENSTGUG00000012884) ##11	CHORDC1 (ENSTGUG00000029643) #12	FAT3 (ENSTGUG00000012873) #14	MTNR1B (ENSTGUG00000028228) #16	ENSTGUG00000012868	SLC36A4 (ENSTGUG00000012863) #17	DEUP1 (ENSTGUG00000012862) #18	SMCO4 (ENSTGUG00000024656) #19	ENSTGUG00000019295 #20	TAF1D (ENSTGUG00000012851) #21	C11orf54 (ENSTGUG00000012850) #22	MED17 (ENSTGUG00000012845) #23	VSTM5 (ENSTGUG00000012843) #24	HEPHL1 (ENSTGUG00000012829) #26	ENSTGUG00000012842	ENSTGUG00000012838 #25	PANX1 (ENSTGUG00000012828) #27	GPR83 (ENSTGUG00000026792) #29	MRE11 (ENSTGUG00000012824) #30	ANKRD49 (ENSTGUG00000012823) #31	C11orf97 (ENSTGUG00000022175) #32	FUT4 (ENSTGUG00000027501) #33	AMOTL1 (ENSTGUG00000012818) #35	CWC15 (ENSTGUG00000029544) #36	ENDOD1 (ENSTGUG00000026431)	SESN3 (ENSTGUG00000024822)
Medium ground finch	MODERN SPECIES	5	FZD4 (ENSGFOG00000005323)	TMEM135 (ENSGFOG00000005294)	RAB38 (ENSGFOG00000005283)	CTSC (ENSGFOG00000005273)	GRM5 (ENSGFOG00000005240)	TYR (ENSGFOG00000005224)	NOX4 (ENSGFOG00000005163)	NAALAD2 (ENSGFOG00000005109) #11	CHORDC1 (ENSGFOG00000005089) #12	FAT3 (ENSGFOG00000004779) #14	MTNR1B (ENSGFOG00000004699) #16	SLC36A4 (ENSGFOG00000004662) #17	SMCO4 (ENSGFOG00000004649) #19	ENSGFOG00000004589 #20	TAF1D (ENSGFOG00000004531) #21	C11orf54 (ENSGFOG00000004512) #22	MED17 (ENSGFOG00000004494) #23	VSTM5 (ENSGFOG00000004486) #24	ENSGFOG00000004454	ENSGFOG00000004426 #25	ENSGFOG00000004413	ENSGFOG00000004362	ENSGFOG00000004352	PANX1 (ENSGFOG00000004334) #27	GPR83 (ENSGFOG00000004321) #29	MRE11 (ENSGFOG00000004308) #30	ANKRD49 (ENSGFOG00000004301) #31	C11orf97 (ENSGFOG00000004289) #32	ENSGFOG00000004274 #33	AMOTL1 (ENSGFOG00000003833) #35	CWC15 (ENSGFOG00000003791) #36
Flycatcher	MODERN SPECIES		GRM5 (ENSFALG00000007862)	TYR (ENSFALG00000007878)	NOX4 (ENSFALG00000023852)	ENSFALG00000007887 ##11	NAALAD2 (ENSFALG00000007895) #11	CHORDC1 (ENSFALG00000007903) #12	FAT3 (ENSFALG00000000272) #14	MTNR1B (ENSFALG00000000278) #16	ENSFALG00000000280	ENSFALG00000026085	SLC36A4 (ENSFALG00000000281) #17	DEUP1 (ENSFALG00000000285) #18	SMCO4 (ENSFALG00000014226) #19	ENSFALG00000000292 #20	TAF1D (ENSFALG00000000293) #21	C11orf54 (ENSFALG00000000294) #22	MED17 (ENSFALG00000000295) #23	VSTM5 (ENSFALG00000028517) #24	ENSFALG00000000300	ENSFALG00000025897 #25	HEPHL1 (ENSFALG00000000307) #26	PANX1 (ENSFALG00000000311) #27	GPR83 (ENSFALG00000000313) #29	MRE11 (ENSFALG00000000315) #30	ANKRD49 (ENSFALG00000027188) #31	ENSFALG00000020356	FUT4 (ENSFALG00000014231) #33	AMOTL1 (ENSFALG00000000320) #35	CWC15 (ENSFALG00000027709) #36	ENDOD1 (ENSFALG00000000330)	SESN3 (ENSFALG00000000333)
Neognathae_c	ANCESTRAL SPECIES	11	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B.`b	ENSGT00950000183168.A
Golden eagle	MODERN SPECIES	10	NOX4 (ENSACCG00020008319)	ENSACCG00020008302	FOLH1 (ENSACCG00020008291) ##11	NAALAD2 (ENSACCG00020008252) #11	CHORDC1 (ENSACCG00020008213) #12	ENSACCG00020008196 #14	ENSACCG00020008176 #14	MTNR1B (ENSACCG00020008161) #16	SLC36A4 (ENSACCG00020008156) #17	ENSACCG00020008145	ENSACCG00020008136	DEUP1 (ENSACCG00020008117) #18	SMCO4 (ENSACCG00020008104) #19	ENSACCG00020008067 #20	TAF1D (ENSACCG00020008021) #21	C11orf54 (ENSACCG00020008009) #22	MED17 (ENSACCG00020007997) #23	VSTM5 (ENSACCG00020007981) #24	ENSACCG00020009626	ENSACCG00020009612 #25	HEPHL1 (ENSACCG00020009476) #26	PANX1 (ENSACCG00020009270) #27	GPR83 (ENSACCG00020009257) #29	MRE11 (ENSACCG00020009228) #30	ANKRD49 (ENSACCG00020009196) #31	C11orf97 (ENSACCG00020009174) #32	FUT4 (ENSACCG00020009150) #33	AMOTL1 (ENSACCG00020009124) #35	CWC15 (ENSACCG00020009107) #36	ENDOD1 (ENSACCG00020009097)	SESN3 (ENSACCG00020009081)
African ostrich	MODERN SPECIES	939											SLC36A4 (ENSSCUG00000018034) #17	DEUP1 (ENSSCUG00000018036) #18	SMCO4 (ENSSCUG00000018039) #19	ENSSCUG00000018046 #20	TAF1D (ENSSCUG00000018058) #21	C11orf54 (ENSSCUG00000018059) #22	MED17 (ENSSCUG00000018060) #23	VSTM5 (ENSSCUG00000018064) #24	ENSSCUG00000018066	ENSSCUG00000018067 #25	HEPHL1 (ENSSCUG00000018071) #26	PANX1 (ENSSCUG00000018075) #27
Australian saltwater crocodile	MODERN SPECIES	27	TMEM135 (ENSCPRG00005016050)	RAB38 (ENSCPRG00005016034)	CTSC (ENSCPRG00005016032)	GRM5 (ENSCPRG00005016003)	TYR (ENSCPRG00005015987)	NOX4 (ENSCPRG00005015970)	FOLH1 (ENSCPRG00005015598) ##11	ENSCPRG00005015519 #11	ENSCPRG00005015516 #11	CHORDC1 (ENSCPRG00005015503) #12	FAT3 (ENSCPRG00005015491) #14	MTNR1B (ENSCPRG00005015445) #16	SMCO4 (ENSCPRG00005015426) #19	ENSCPRG00005015383 #20	ENSCPRG00005015361 #21	C11orf54 (ENSCPRG00005015358) #22	MED17 (ENSCPRG00005015350) #23	ENSCPRG00005015345	ENSCPRG00005015337 #25	ENSCPRG00005015292	ENSCPRG00005015275	ENSCPRG00005015273 #27	GPR83 (ENSCPRG00005015271) #29	MRE11 (ENSCPRG00005015256) #30	ENSCPRG00005015245	FUT4 (ENSCPRG00005015235) #33	PIWIL4 (ENSCPRG00005015220) #34	AMOTL1 (ENSCPRG00005015195) #35	CWC15 (ENSCPRG00005015180) #36	ENDOD1 (ENSCPRG00005015178)	SESN3 (ENSCPRG00005015169)
Cryptodira	ANCESTRAL SPECIES		ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.c	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.c	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36
Emydidae	ANCESTRAL SPECIES	19	ENSGT00940000157301.b	ENSGT00940000155787.o	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.a #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a.a #18	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.c	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36
Three-toed box turtle	MODERN SPECIES	41	ENSTMTG00000016889	GRM5 (ENSTMTG00000016932)	TYR (ENSTMTG00000017343)	NOX4 (ENSTMTG00000017371)	ENSTMTG00000017415	FOLH1 (ENSTMTG00000017450) ##11	NAALAD2 (ENSTMTG00000018096) #11	CHORDC1 (ENSTMTG00000020258) #12	FAT3 (ENSTMTG00000020266) #14	MTNR1B (ENSTMTG00000020281) #16	ENSTMTG00000020287 #17	ENSTMTG00000020296 #18	ENSTMTG00000020305 #18	ENSTMTG00000020319 #20	ENSTMTG00000020383 #21	C11orf54 (ENSTMTG00000020387) #22	MED17 (ENSTMTG00000020392) #23	VSTM5 (ENSTMTG00000020399) #24	ENSTMTG00000020405	ENSTMTG00000020417	ENSTMTG00000020430 #25	HEPHL1 (ENSTMTG00000020465) #26	ENSTMTG00000020644 #27	GPR83 (ENSTMTG00000020649) #29	ENSTMTG00000020654 #30	ENSTMTG00000020664 #30	ANKRD49 (ENSTMTG00000020673) #31	C11orf97 (ENSTMTG00000020677) #32	FUT4 (ENSTMTG00000020687) #33	PIWIL4 (ENSTMTG00000020697) #34	AMOTL1 (ENSTMTG00000020714) #35
painted turtle	MODERN SPECIES	1884																C11orf54 (ENSCPBG00000011164) #22
Testudinidae	ANCESTRAL SPECIES		ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT00940000169935	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174.a #12	ENSGT00940000154981.f #14	ENSGT00940000154981.e #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029.c	ENSGT00940000166029.d	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994 #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36
Abingdon island giant tortoise	MODERN SPECIES	485														SMCO4 (ENSCABG00000011621) #19	ENSCABG00000011647 #21	C11orf54 (ENSCABG00000011649) #22	MED17 (ENSCABG00000011653) #23	VSTM5 (ENSCABG00000011654) #24	ENSCABG00000011655	ENSCABG00000011658	ENSCABG00000011661	ENSCABG00000011666 #25	HEPHL1 (ENSCABG00000011677) #26	ENSCABG00000011852
Goode s thornscrub tortoise	MODERN SPECIES		NOX4 (ENSGEVG00005002640)	ENSGEVG00005002656	ENSGEVG00005002661	FOLH1 (ENSGEVG00005002701) ##11	NAALAD2 (ENSGEVG00005002830) #11	CHORDC1 (ENSGEVG00005002862) #12	ENSGEVG00005002873 #14	ENSGEVG00005002883 #14	ENSGEVG00005002896 #14	MTNR1B (ENSGEVG00005002911) #16	ENSGEVG00005002921 #17	DEUP1 (ENSGEVG00005002935) #18	SMCO4 (ENSGEVG00005002950) #19	ENSGEVG00005002997 #20	ENSGEVG00005005048 #21	C11orf54 (ENSGEVG00005005073) #22	MED17 (ENSGEVG00005005133) #23	VSTM5 (ENSGEVG00005005173) #24	ENSGEVG00005005202	ENSGEVG00005005236	ENSGEVG00005005301 #25	HEPHL1 (ENSGEVG00005005429) #26	ENSGEVG00005005884 #27	GPR83 (ENSGEVG00005005900) #29	MRE11 (ENSGEVG00005005932) #30	ANKRD49 (ENSGEVG00005005970) #31	C11orf97 (ENSGEVG00005006010) #32	FUT4 (ENSGEVG00005006031) #33	PIWIL4 (ENSGEVG00005006224) #34	AMOTL1 (ENSGEVG00005007334) #35	CWC15 (ENSGEVG00005007384) #36
Chinese turtle	MODERN SPECIES	1972															ENSPSIG00000004198 #21	C11orf54 (ENSPSIG00000004224) #22	MED17 (ENSPSIG00000004370) #23	VSTM5 (ENSPSIG00000004406) #24	ENSPSIG00000004429	ENSPSIG00000004492	ENSPSIG00000004705 #25	HEPHL1 (ENSPSIG00000004803) #26	PANX1 (ENSPSIG00000005582) #27	GPR83 (ENSPSIG00000005775) #29	MRE11 (ENSPSIG00000005945) #30	ANKRD49 (ENSPSIG00000007007) #31
Lepidosauria	ANCESTRAL SPECIES	17	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT00950000185226	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994.c #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000161773	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994.c #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B
Laterata	ANCESTRAL SPECIES	3	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000161773	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994.c #26	ENSGT00940000153972.A #27	ENSGT00940000154336 #29	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B
Common wall lizard	MODERN SPECIES	12	NOX4 (ENSPMRG00000002424)	FOLH1 (ENSPMRG00000002456) ##11	CHORDC1 (ENSPMRG00000002476) #12	ENSPMRG00000002487	ENSPMRG00000002494	ENSPMRG00000002498	FAT3 (ENSPMRG00000002530) #14	ENSPMRG00000002617	MTNR1B (ENSPMRG00000002623) #16	SLC36A4 (ENSPMRG00000002627) #17	ENSPMRG00000002637 #18	SMCO4 (ENSPMRG00000002647) #19	CMTR2 (ENSPMRG00000008242)	ENSPMRG00000008257 #20	ENSPMRG00000008316 #21	C11orf54 (ENSPMRG00000008327) #22	MED17 (ENSPMRG00000008340) #23	ENSPMRG00000008351	ENSPMRG00000008372	ENSPMRG00000008426 #25	HEPHL1 (ENSPMRG00000008435) #26	PANX1 (ENSPMRG00000008448) #27	ENSPMRG00000008452	ENSPMRG00000008454	GPR83 (ENSPMRG00000008457) #29	MRE11 (ENSPMRG00000008460) #30	ANKRD49 (ENSPMRG00000008465) #31	FUT4 (ENSPMRG00000008469) #33	ENSPMRG00000008502 #34	AMOTL1 (ENSPMRG00000008682) #35	CWC15 (ENSPMRG00000008694) #36
Argentine black and white tegu	MODERN SPECIES	24	NOX4 (ENSSMRG00000009686)	FOLH1 (ENSSMRG00000009691) ##11	NAALAD2 (ENSSMRG00000009705) #11	CHORDC1 (ENSSMRG00000009707) #12	ENSSMRG00000009708	ENSSMRG00000009714	ENSSMRG00000009720	FAT3 (ENSSMRG00000009743) #14	MTNR1B (ENSSMRG00000009747) #16	SLC36A4 (ENSSMRG00000009758) #17	DEUP1 (ENSSMRG00000009760) #18	SMCO4 (ENSSMRG00000009779) #19	CMTR2 (ENSSMRG00000009796)	ENSSMRG00000009797 #20	ENSSMRG00000009830 #21	C11orf54 (ENSSMRG00000009835) #22	MED17 (ENSSMRG00000009836) #23	VSTM5 (ENSSMRG00000009838) #24	ENSSMRG00000009850	ENSSMRG00000009854 #25	ENSSMRG00000009859	PANX1 (ENSSMRG00000009865) #27	GPR83 (ENSSMRG00000009866) #29	MRE11 (ENSSMRG00000009882) #30	ANKRD49 (ENSSMRG00000009883) #31	C11orf97 (ENSSMRG00000009893) #32	FUT4 (ENSSMRG00000009896) #33	PIWIL4 (ENSSMRG00000009898) #34	AMOTL1 (ENSSMRG00000010190) #35	CWC15 (ENSSMRG00000010192) #36	ENDOD1 (ENSSMRG00000010205)
Toxicofera	ANCESTRAL SPECIES	9	ENSGT00940000155787	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000161773	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029	ENSGT01030000234590.A.a.b #25	ENSGT00940000157994.c #26	ENSGT00940000153972.A #27	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B	ENSGT00950000183168.A
Elapidae	ANCESTRAL SPECIES	10	ENSGT00940000155787.n	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b.i #11	ENSGT00940000154174 #12	ENSGT00940000154981 #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000161773	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029	ENSGT00390000015701	ENSGT00940000153972.A #27	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074
Elapidae_a	ANCESTRAL SPECIES	41	ENSGT00940000155787.n	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b.i #11	ENSGT00940000154174 #12	ENSGT00940000154981.g #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000161773	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029	ENSGT00390000015701	ENSGT00940000153972.A #27	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074
Acanthophiinae	ANCESTRAL SPECIES	42	ENSGT00940000155787.n	ENSGT01030000234595.A.a	ENSGT00940000155336	ENSGT00940000159621	ENSGT01030000234598.b.a.b.k.a ##11	ENSGT01030000234598.b.a.b.k.b.i #11	ENSGT00940000154174 #12	ENSGT00940000154981.g #14	ENSGT00940000162341 #16	ENSGT00940000160117 #17	ENSGT00940000153190.B.a #18	ENSGT00390000015987 #19	ENSGT00940000161773	ENSGT00940000153123.A #20	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00390000011810 #23	ENSGT01100000263551.b.a.b #24	ENSGT00940000166029	ENSGT00390000015701	ENSGT00940000153972.A #27	ENSGT00390000017288 #30	ENSGT00390000003919 #31	ENSGT00520000058823 #32	ENSGT00940000162506 #33	ENSGT00950000183200.A.a.a #34	ENSGT00940000160158 #35	ENSGT00390000012084 #36	ENSGT01030000234592.B	ENSGT00950000183168.A	ENSGT00940000159074
Eastern brown snake	MODERN SPECIES	33	CTSC (ENSPTXG00000001207)	GRM5 (ENSPTXG00000001252)	TYR (ENSPTXG00000002601)	NOX4 (ENSPTXG00000002912)	FOLH1 (ENSPTXG00000002913) ##11	NAALAD2 (ENSPTXG00000003043) #11	CHORDC1 (ENSPTXG00000004173) #12	FAT3 (ENSPTXG00000004176) #14	MTNR1B (ENSPTXG00000004180) #16	SLC36A4 (ENSPTXG00000004183) #17	DEUP1 (ENSPTXG00000004188) #18	SMCO4 (ENSPTXG00000004192) #19	CMTR2 (ENSPTXG00000004193)	ENSPTXG00000004196 #20	ENSPTXG00000004210 #21	C11orf54 (ENSPTXG00000004213) #22	MED17 (ENSPTXG00000004217) #23	VSTM5 (ENSPTXG00000004220) #24	ENSPTXG00000004222	ENSPTXG00000004224	HEPHL1 (ENSPTXG00000004241) #26	ENSPTXG00000004730	ENSPTXG00000004732 #27	MRE11 (ENSPTXG00000004736) #30	ANKRD49 (ENSPTXG00000004769) #31	C11orf97 (ENSPTXG00000004770) #32	FUT4 (ENSPTXG00000004772) #33	PIWIL4 (ENSPTXG00000004775) #34	AMOTL1 (ENSPTXG00000004778) #35	CWC15 (ENSPTXG00000004785) #36	ENDOD1 (ENSPTXG00000004786)
Mainland tiger snake	MODERN SPECIES	122	ENSNSUG00000001121	GRM5 (ENSNSUG00000000863)	TYR (ENSNSUG00000000045)	NOX4 (ENSNSUG00000000016)	FOLH1 (ENSNSUG00000018153) ##11	NAALAD2 (ENSNSUG00000018152) #11	CHORDC1 (ENSNSUG00000018151) #12	FAT3 (ENSNSUG00000018150) #14	MTNR1B (ENSNSUG00000018149) #16	SLC36A4 (ENSNSUG00000018148) #17	ENSNSUG00000018147 #18	ENSNSUG00000018146	SMCO4 (ENSNSUG00000018145) #19	CMTR2 (ENSNSUG00000018143)	ENSNSUG00000018133 #21	C11orf54 (ENSNSUG00000018132) #22	MED17 (ENSNSUG00000018104) #23	VSTM5 (ENSNSUG00000018095) #24	ENSNSUG00000018091	ENSNSUG00000018089	ENSNSUG00000018003	PANX1 (ENSNSUG00000017999) #27	MRE11 (ENSNSUG00000017996) #30	ANKRD49 (ENSNSUG00000017995) #31	C11orf97 (ENSNSUG00000017994) #32
Blue-lipped sea krait	MODERN SPECIES	8035															TAF1D (ENSLLTG00000015215) #21	C11orf54 (ENSLLTG00000015217) #22	MED17 (ENSLLTG00000015224) #23
Indian cobra	MODERN SPECIES	4	ENSNNAG00000005993	ENSNNAG00000005985	GRM5 (ENSNNAG00000005247)	TYR (ENSNNAG00000005074)	NOX4 (ENSNNAG00000005040)	FOLH1 (ENSNNAG00000004877) ##11	NAALAD2 (ENSNNAG00000004784) #11	CHORDC1 (ENSNNAG00000004752) #12	FAT3 (ENSNNAG00000004646) #14	MTNR1B (ENSNNAG00000004609) #16	SLC36A4 (ENSNNAG00000004546) #17	DEUP1 (ENSNNAG00000004400) #18	SMCO4 (ENSNNAG00000004371) #19	ENSNNAG00000004348	ENSNNAG00000004276	C11orf54 (ENSNNAG00000004244) #22	MED17 (ENSNNAG00000004193) #23	VSTM5 (ENSNNAG00000004171) #24	ENSNNAG00000004124	ENSNNAG00000004089	ENSNNAG00000004076 #27	ENSNNAG00000004046 #30	ENSNNAG00000004034 #30	ANKRD49 (ENSNNAG00000004023) #31	C11orf97 (ENSNNAG00000004006) #32	FUT4 (ENSNNAG00000003996) #33	PIWIL4 (ENSNNAG00000003845) #34	AMOTL1 (ENSNNAG00000003274) #35	CWC15 (ENSNNAG00000003179) #36	ENDOD1 (ENSNNAG00000003169)	ENSNNAG00000003155
Lizard	MODERN SPECIES	2	NAALAD2 (ENSACAG00000014471) #11	CHORDC1 (ENSACAG00000014370) #12	ENSACAG00000024003	ENSACAG00000016370	ENSACAG00000040047	ENSACAG00000038029	FAT3 (ENSACAG00000014669) #14	ENSACAG00000029244	ENSACAG00000044248	MTNR1B (ENSACAG00000038163) #16	DEUP1 (ENSACAG00000014823) #18	SMCO4 (ENSACAG00000014597) #19	CMTR2 (ENSACAG00000036088)	ENSACAG00000014591 #20	TAF1D (ENSACAG00000014587) #21	C11orf54 (ENSACAG00000014533) #22	ENSACAG00000041938 #23	ENSACAG00000014462 #23	ENSACAG00000014459 #24	ENSACAG00000014418	ENSACAG00000014403 #25	ENSACAG00000014257 #26	ENSACAG00000014226 #27	MRE11 (ENSACAG00000014110) #30	ANKRD49 (ENSACAG00000014101) #31	C11orf97 (ENSACAG00000028473) #32	FUT4 (ENSACAG00000014099) #33	ENSACAG00000041426	PIWIL4 (ENSACAG00000014070) #34	ENSACAG00000035085	AMOTL1 (ENSACAG00000014015) #35
tuatara	MODERN SPECIES	964									ENSSPUG00000015965 #14	MTNR1B (ENSSPUG00000015946) #16	ENSSPUG00000015933 #17	DEUP1 (ENSSPUG00000015835) #18	SMCO4 (ENSSPUG00000015813) #19	ENSSPUG00000015805 #20	ENSSPUG00000015747 #20	C11orf54 (ENSSPUG00000015667) #22	MED17 (ENSSPUG00000015657) #23	VSTM5 (ENSSPUG00000015648) #24	HEPHL1 (ENSSPUG00000015609) #26	ENSSPUG00000015586 #27	ENSSPUG00000015577	ENSSPUG00000015558	YAP1 (ENSSPUG00000015546)	CFAP300 (ENSSPUG00000015520)	ENSSPUG00000015509	ANGPTL5 (ENSSPUG00000015487)	TRPC6 (ENSSPUG00000015206)	PGR (ENSSPUG00000015094)	ENSSPUG00000015069	ARHGAP42 (ENSSPUG00000015036)	CNTN5 (ENSSPUG00000014995)
Anura	ANCESTRAL SPECIES	528															ENSGT00390000009061 #21	ENSGT00390000017214 #22
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000021512	RFC2 (ENSLLEG00000021605)	ENSLLEG00000022266	CLIP2 (ENSLLEG00000022336)	GTF2IRD1 (ENSLLEG00000022903)	ENSLLEG00000024294	GTF2I (ENSLLEG00000024352)	ENSLLEG00000000484	NCF1 (ENSLLEG00000000499)	RCC1L (ENSLLEG00000000519)	CASTOR2 (ENSLLEG00000000547)	ENSLLEG00000000572	ENSLLEG00000000596	ENSLLEG00000000705 #21	ENSLLEG00000000741	C11orf54 (ENSLLEG00000000752) #22	TBX4 (ENSLLEG00000000863)	ENSLLEG00000000955	ENSLLEG00000000989	ENSLLEG00000001065	ENSLLEG00000001072	ENSLLEG00000001079	ENSLLEG00000001084	ENSLLEG00000001091	ENSLLEG00000001098	BCAS3 (ENSLLEG00000001138)	ENSLLEG00000001387	PPM1D (ENSLLEG00000001395)	ENSLLEG00000001422	APPBP2 (ENSLLEG00000001470)	ENSLLEG00000001606
Coelacanth	MODERN SPECIES	250	C1QBP (ENSLACG00000018219)	MIS12 (ENSLACG00000018211)	IFT22 (ENSLACG00000018212)	DERL2 (ENSLACG00000018200)	DHX33 (ENSLACG00000018174)	ENSLACG00000018066	ENSLACG00000018060	ENSLACG00000018018	CUX1 (ENSLACG00000017710)	SH2B2 (ENSLACG00000017508)	PRKRIP1 (ENSLACG00000017486)	ENSLACG00000017371	NCF1 (ENSLACG00000017263)	RCC1L (ENSLACG00000017163)	ENSLACG00000016662 #21	C11orf54 (ENSLACG00000016618) #22	ENSLACG00000015831	ENSLACG00000014091	ENSLACG00000012524	AUTS2 (ENSLACG00000007721)	GALNT17 (ENSLACG00000003791)	ENSLACG00000001761
Actinopterygii	ANCESTRAL SPECIES	75	ENSGT00990000203589.a.a	ENSGT00390000015077	ENSGT00940000161188	ENSGT00390000011888	ENSGT00390000013680.b	ENSGT00740000117073	ENSGT00940000156740	ENSGT00940000154203	ENSGT00940000155062.b	ENSGT00940000157069	ENSGT00390000007230	ENSGT00390000015991	ENSGT00950000183166.a.a.a.a	ENSGT00940000158902	ENSGT00390000009061 #21	ENSGT00390000017214 #22	ENSGT00940000176149	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000165416
Neopterygii	ANCESTRAL SPECIES	426															ENSGT00940000158902	ENSGT00390000017214 #22	ENSGT00940000176149	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000165416
Osteoglossocephalai	ANCESTRAL SPECIES	7	ENSGT01020000230351.E.d	ENSGT00940000162439	ENSGT00940000157820.a.b	ENSGT00940000163355	ENSGT00940000163680	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00990000205129	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00950000183166.a.a.a.b.e.b	ENSGT00390000015991	ENSGT00940000169081	ENSGT00940000156740	ENSGT00390000013680.b.a	ENSGT00390000011888	ENSGT00940000154823	ENSGT00940000154829.i.a	ENSGT00950000182952.A.b	ENSGT00390000002429	ENSGT00940000159908	ENSGT00940000157890
Osteoglossiformes	ANCESTRAL SPECIES	27	ENSGT00390000013800	ENSGT00530000063811.A.a.a	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00950000183166.a.a.a.b.e.b	ENSGT00390000015991	ENSGT00390000007230.a
P. kingsleyae	MODERN SPECIES	28	ENSPKIG00000019037	trpv1 (ENSPKIG00000019055)	SHPK (ENSPKIG00000019086)	p2rx5 (ENSPKIG00000019138)	emc6 (ENSPKIG00000019230)	UBB (ENSPKIG00000019243)	CENPV (ENSPKIG00000019290)	pigl (ENSPKIG00000019311)	ncor1 (ENSPKIG00000019364)	zswim7 (ENSPKIG00000019504)	adora2b (ENSPKIG00000019530)	ENSPKIG00000019548	TIMM22 (ENSPKIG00000019575)	abr (ENSPKIG00000019607)	aspa (ENSPKIG00000019648)	zgc:85789 (ENSPKIG00000019680) #22	AKAP10 (ENSPKIG00000019721)	ENSPKIG00000019759	ENSPKIG00000019766	cltca (ENSPKIG00000019841)	ptrh2 (ENSPKIG00000019982)	VMP1 (ENSPKIG00000020009)	rps6kb1b (ENSPKIG00000020084)	rnft1 (ENSPKIG00000020150)	med13a (ENSPKIG00000020202)	ints2 (ENSPKIG00000020268)	AUTS2 (ENSPKIG00000020360)	ENSPKIG00000020479	cxadr (ENSPKIG00000020497)	btg3 (ENSPKIG00000020578)	zgc:110006 (ENSPKIG00000020592)
Asian bonytongue	MODERN SPECIES	19	eral1 (ENSSFOG00015015511)	fam222ba (ENSSFOG00015028464)	trpv1 (ENSSFOG00015015422)	SHPK (ENSSFOG00015015315)	emc6 (ENSSFOG00015015305)	p2rx5 (ENSSFOG00015027979)	CENPV (ENSSFOG00015031837)	pigl (ENSSFOG00015033284)	ncor1 (ENSSFOG00015015165)	zswim7 (ENSSFOG00015015135)	adora2b (ENSSFOG00015015124)	SPECC1 (ENSSFOG00015015085)	TIMM22 (ENSSFOG00015015062)	abr (ENSSFOG00015014912)	aspa (ENSSFOG00015014886)	zgc:85789 (ENSSFOG00015014869) #22	AKAP10 (ENSSFOG00015014821)	ENSSFOG00015014806	ENSSFOG00015014797	cltca (ENSSFOG00015014567)	ptrh2 (ENSSFOG00015014530)	VMP1 (ENSSFOG00015014460)	ENSSFOG00015014392	rnft1 (ENSSFOG00015014371)	med13a (ENSSFOG00015014324)	ints2 (ENSSFOG00015014282)	AUTS2 (ENSSFOG00015014144)	cxadr (ENSSFOG00015029571)	btg3 (ENSSFOG00015014103)	btg3 (ENSSFOG00015014091)	zgc:110006 (ENSSFOG00015025769)
Clupeocephala	ANCESTRAL SPECIES	33	ENSGT00940000162439	ENSGT00900000141103	ENSGT00940000157820.a.b	ENSGT00940000163355	ENSGT00940000163680	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00990000205129	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00950000183166.a.a.a.b.e.b	ENSGT00940000177608	ENSGT00950000183166.a.a.a.a	ENSGT00390000015991	ENSGT00390000007230.a	ENSGT00940000155062.b.d.b	ENSGT00940000156740	ENSGT00390000013680.b.a	ENSGT00390000011888	ENSGT00940000154823	ENSGT00940000154829.i.a	ENSGT00950000182952.A.b
Otomorpha	ANCESTRAL SPECIES	23	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000162439	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00990000205129	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000018151	ENSGT00990000203589.a.a	ENSGT00390000015077
Clupeiformes	ANCESTRAL SPECIES	467										ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000018151	ENSGT00990000203589.a.a
Atlantic herring	MODERN SPECIES	24	UNC79 (ENSCHAG00000019300)	ENSCHAG00000019281	ei24 (ENSCHAG00000019125)	ENSCHAG00000019115	ENSCHAG00000019100	stt3a (ENSCHAG00000018293)	ENSCHAG00000018014	zswim7 (ENSCHAG00000017993)	adora2b (ENSCHAG00000017963)	SPECC1 (ENSCHAG00000017935)	ENSCHAG00000017908	ENSCHAG00000017847	ENSCHAG00000017826	ABR (ENSCHAG00000013847)	aspa (ENSCHAG00000013737)	zgc:85789 (ENSCHAG00000013650) #22	ENSCHAG00000013640	ENSCHAG00000013625	ENSCHAG00000013612	RSPH6A (ENSCHAG00000013599)	napaa (ENSCHAG00000013445)	ENSCHAG00000013417	prkrip1 (ENSCHAG00000013413)	upk3b (ENSCHAG00000013408)	rasa4 (ENSCHAG00000013042)	CLIP2 (ENSCHAG00000012368)	GTF2IRD1 (ENSCHAG00000012321)	dtx2 (ENSCHAG00000012292)	tmem132e (ENSCHAG00000012267)	lig3 (ENSCHAG00000010657)	rad51d (ENSCHAG00000010433)
Denticle herring	MODERN SPECIES	16	fam222ba (ENSDCDG00000008394)	trpv1 (ENSDCDG00000008455)	SHPK (ENSDCDG00000009069)	emc6 (ENSDCDG00000009086)	p2rx5 (ENSDCDG00000009106)	UBB (ENSDCDG00000009125)	ENSDCDG00000009143	pigl (ENSDCDG00000009165)	trpv1 (ENSDCDG00000011641)	zswim7 (ENSDCDG00000011657)	adora2b (ENSDCDG00000011662)	SPECC1 (ENSDCDG00000011670)	TIMM22 (ENSDCDG00000011692)	ABR (ENSDCDG00000011733)	aspa (ENSDCDG00000014518)	zgc:85789 (ENSDCDG00000014523) #22	ENSDCDG00000014530	ENSDCDG00000014533	AKAP10 (ENSDCDG00000014561)	ENSDCDG00000015063	ENSDCDG00000015064	ENSDCDG00000015067	ENSDCDG00000015068	NAPA (ENSDCDG00000015071)	ENSDCDG00000015389	ENSDCDG00000015397	ENSDCDG00000015399	mis12 (ENSDCDG00000015401)	derl2 (ENSDCDG00000015406)
Otophysi	ANCESTRAL SPECIES	27	ENSGT00940000157083	ENSGT00970000194164	ENSGT00770000120972	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00390000016067	ENSGT00940000153592.B.a	ENSGT01030000234555.a.a.a.c.a	ENSGT00390000017523	ENSGT00950000183135.A.a	ENSGT00940000153491.b.b.a	ENSGT00990000205129	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000018151	ENSGT00990000203589.a.a	ENSGT00390000015077	ENSGT00940000175063	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00500000044869.a.b	ENSGT00390000017045	ENSGT00440000037341.b.b	ENSGT00940000154849.a	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A
Characiphysae	ANCESTRAL SPECIES	56	ENSGT00390000013846.a.a	ENSGT00940000166104	ENSGT00940000155976.b.a.b	ENSGT00390000017030.b.a	ENSGT00940000159362	ENSGT00940000164999	ENSGT00940000156689	ENSGT00940000155853.d.a	ENSGT00940000153592.B.a	ENSGT01030000234555.a.a.a.c.a	ENSGT00390000017523	ENSGT00950000183135.A.a	ENSGT00940000153491.b.b.a	ENSGT00990000205129	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000018151	ENSGT00990000203589.a.a	ENSGT00390000015077	ENSGT00940000175063	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00390000017045	ENSGT00440000037341.b.b	ENSGT00940000154849.a	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b
Channel catfish	MODERN SPECIES	20	LAMC3 (ENSIPUG00000024147)	fibcd1b (ENSIPUG00000024146)	ENSIPUG00000024145	zgc:63972 (ENSIPUG00000024144)	garnl3 (ENSIPUG00000024135)	ENSIPUG00000024128	ttll11 (ENSIPUG00000024127)	ENSIPUG00000024126	DAB2IP (ENSIPUG00000024124)	specc1 (ENSIPUG00000024119)	adora2b (ENSIPUG00000024117)	zswim7 (ENSIPUG00000024116)	ENSIPUG00000024113	abr (ENSIPUG00000024090)	aspa (ENSIPUG00000024083)	c28h11orf54 (ENSIPUG00000024077) #22	spata22 (ENSIPUG00000024074)	tmem211 (ENSIPUG00000024071)	akap10 (ENSIPUG00000024062)	selenow1 (ENSIPUG00000024060)	EHD2 (ENSIPUG00000024057)	ENSIPUG00000024052	ENSIPUG00000024050	napaa (ENSIPUG00000024032)	rsph6a (ENSIPUG00000024030)	SYMPK (ENSIPUG00000024020)	HNRNPUL1 (ENSIPUG00000024012)	im:7138535 (ENSIPUG00000024006)	gas2l2 (ENSIPUG00000024002)	rasl10b (ENSIPUG00000023998)	ap2b1 (ENSIPUG00000023990)
Characiphysae_b	ANCESTRAL SPECIES	56	ENSGT00390000013846.a.a	ENSGT00940000166104	ENSGT00940000155976.b.a.b	ENSGT00390000017030.b.a	ENSGT00940000159362	ENSGT00940000164999	ENSGT00940000156689	ENSGT00940000155853.d.a	ENSGT00940000153592.B.a	ENSGT01030000234555.a.a.a.c.a	ENSGT00390000017523	ENSGT00950000183135.A.a	ENSGT00940000153491.b.b.a	ENSGT00990000205129	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000018151	ENSGT00990000203589.a.a	ENSGT00390000015077	ENSGT00940000175063	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00500000044869.a.b	ENSGT00390000017045	ENSGT00440000037341.b.b	ENSGT00940000154849.a	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A
Characoidei	ANCESTRAL SPECIES	39	ENSGT00940000166104	ENSGT00880000138014.a	ENSGT00940000155976.b.a.b	ENSGT00390000017030.b.a	ENSGT00940000159362	ENSGT00940000164999	ENSGT00940000156689	ENSGT00940000155853.d.a	ENSGT00940000153592.B.a	ENSGT01030000234555.a.a.a.c.a	ENSGT00390000017523	ENSGT00950000183135.A.a	ENSGT00940000153491.b.b.a	ENSGT00990000205129	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000018151	ENSGT00990000203589.a.a	ENSGT00390000015077	ENSGT00940000161069	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00500000044869.a.b	ENSGT00390000017045	ENSGT00440000037341.b.b	ENSGT00940000154849.a	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b
Red-bellied piranha	MODERN SPECIES	2	fibcd1b (ENSPNAG00000018104)	ENSPNAG00000018074	zgc:63972 (ENSPNAG00000018062)	garnl3 (ENSPNAG00000018040)	ENSPNAG00000017780	ttll11 (ENSPNAG00000017759)	dab2ipb (ENSPNAG00000007041)	SPECC1 (ENSPNAG00000017516)	adora2b (ENSPNAG00000017460)	zswim7 (ENSPNAG00000017450)	ENSPNAG00000017440	ABR (ENSPNAG00000017401)	ENSPNAG00000017122	aspa (ENSPNAG00000017112)	ENSPNAG00000017100	zgc:85789 (ENSPNAG00000017098) #22	ENSPNAG00000017045	ENSPNAG00000017035	AKAP10 (ENSPNAG00000017025)	selenow1 (ENSPNAG00000016995)	EHD2 (ENSPNAG00000016978)	ENSPNAG00000016953	napaa (ENSPNAG00000016904)	RSPH6A (ENSPNAG00000016832)	castor2 (ENSPNAG00000016806)	rcc1l (ENSPNAG00000005877)	ENSPNAG00000016703	ncf1 (ENSPNAG00000016649)	polr2j (ENSPNAG00000016595)	alkbh4 (ENSPNAG00000005629)	lrwd1 (ENSPNAG00000016556)
Mexicana tetra	MODERN SPECIES	18	ENSAMXG00000036646	gcm2 (ENSAMXG00000006073)	elovl2 (ENSAMXG00000006127)	gnal (ENSAMXG00000037115)	ENSAMXG00000037077	mppe1 (ENSAMXG00000006372)	ENSAMXG00000006447	ENSAMXG00000006460	IMPA1 (ENSAMXG00000006472)	CDH7 (ENSAMXG00000038551)	ENSAMXG00000034817	zswim7 (ENSAMXG00000013916)	ENSAMXG00000042358	ABR (ENSAMXG00000037585)	aspa (ENSAMXG00000041749)	zgc:85789 (ENSAMXG00000013791) #22	ENSAMXG00000038823	ENSAMXG00000026322	AKAP10 (ENSAMXG00000033348)	selenow1 (ENSAMXG00000042466)	EHD2 (ENSAMXG00000013748)	ENSAMXG00000013722	napaa (ENSAMXG00000042669)	RSPH6A (ENSAMXG00000013707)	SYMPK (ENSAMXG00000013677)	HNRNPUL1 (ENSAMXG00000013644)	im:7138535 (ENSAMXG00000042035)	ENSAMXG00000042764	ENSAMXG00000041735	RASL10B (ENSAMXG00000040751)	ap2b1 (ENSAMXG00000013533)
Electric eel	MODERN SPECIES	76	gfm2 (ENSEEEG00000006995)	aif1l (ENSEEEG00000006994)	ENSEEEG00000006992	fibcd1b (ENSEEEG00000006990)	zgc:63972 (ENSEEEG00000006988)	garnl3 (ENSEEEG00000006987)	ENSEEEG00000006985	ttll11 (ENSEEEG00000006984)	dab2ipb (ENSEEEG00000006903)	SPECC1 (ENSEEEG00000006899)	adora2b (ENSEEEG00000006897)	zswim7 (ENSEEEG00000006894)	NANOS2 (ENSEEEG00000006893)	ABR (ENSEEEG00000005393)	aspa (ENSEEEG00000005343)	zgc:85789 (ENSEEEG00000005323) #22	ENSEEEG00000005314	ENSEEEG00000005313	AKAP10 (ENSEEEG00000005032)	ENSEEEG00000005021	EHD2 (ENSEEEG00000004888)	ENSEEEG00000004887	ENSEEEG00000004886	napaa (ENSEEEG00000004774)	RSPH6A (ENSEEEG00000004754)	SYMPK (ENSEEEG00000004564)	HNRNPUL1 (ENSEEEG00000004548)	im:7138535 (ENSEEEG00000004546)	ENSEEEG00000004545	RASL10B (ENSEEEG00000004544)	ap2b1 (ENSEEEG00000004531)
Cyprinoidei	ANCESTRAL SPECIES	37	ENSGT00940000155178	ENSGT00940000155591.i	ENSGT00940000159729	ENSGT00530000063405.b.f	ENSGT00950000183155.a.a.a.b	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00390000016067	ENSGT00940000153592.B.a	ENSGT01030000234555.a.a.a.c.a	ENSGT00390000017523	ENSGT00950000183135.A.a	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00990000210050	ENSGT00390000017214 #22	ENSGT00390000018151	ENSGT00990000203589.a.a	ENSGT00390000015077	ENSGT00940000175063	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00500000044869.a.b	ENSGT00390000017045	ENSGT00940000154849.a	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b
Cyprininae	ANCESTRAL SPECIES	21	ENSGT00940000155591.i.h	ENSGT00940000159729.h	ENSGT00530000063405.b.f.c	ENSGT00950000183155.a.a.a.b.a	ENSGT00940000155545.b.d.b	ENSGT01010000222313.A.b.b.b.a.c	ENSGT00390000016067.o	ENSGT00940000153592.B.a.bb	ENSGT01030000234555.a.a.a.c.a.h	ENSGT01030000234555.a.a.a.c.a.g	ENSGT00390000017523	ENSGT00950000183135.A.a.o	ENSGT00990000205129	ENSGT00940000153491.b.b.a.g.a	ENSGT00390000001189.a.b	ENSGT00390000017214 #22	ENSGT00390000018151.e	ENSGT00990000203589.a.a.d	ENSGT00390000015077.h	ENSGT00940000161069.a.a	ENSGT00940000159256.o.o.b	ENSGT00940000160330.j	ENSGT00940000158431.a.a.a.a.b.a.c.b.f	ENSGT00390000005826.a.a.l.a	ENSGT00500000044869.a.b.q	ENSGT00390000017045.m	ENSGT00950000182946.lb.a.f	ENSGT00940000157823.jb.a	ENSGT00440000037341.b.b.d	ENSGT00940000154849.a.f	ENSGT00940000160764.d
Goldfish	MODERN SPECIES	44	rabep1 (ENSCARG00000001259)	nup88 (ENSCARG00000001194)	ENSCARG00000001188	rasa4 (ENSCARG00000001009)	CLIP2 (ENSCARG00000000676)	GTF2IRD1 (ENSCARG00000000591)	dtx2 (ENSCARG00000000583)	ENSCARG00000000578	TIMM22 (ENSCARG00000000572)	SPECC1 (ENSCARG00000000568)	adora2b (ENSCARG00000000563)	zswim7 (ENSCARG00000000557)	ENSCARG00000000551	ABR (ENSCARG00000000427)	aspa (ENSCARG00000000328)	zgc:85789 (ENSCARG00000000318) #22	ENSCARG00000000308	ENSCARG00000000294	AKAP10 (ENSCARG00000000264)	selenow1 (ENSCARG00000000209)	napaa (ENSCARG00000000189)	RSPH6A (ENSCARG00000031941)	SYMPK (ENSCARG00000031570)	ENSCARG00000031507	ENSCARG00000031482	ENSCARG00000029881	im:7138535 (ENSCARG00000029815)	RASL10B (ENSCARG00000029810)	orai2 (ENSCARG00000029497)	bckdk (ENSCARG00000028228)	lrwd1 (ENSCARG00000028165)
Cyprininae_a	ANCESTRAL SPECIES	75	ENSGT00940000155178.j.b	ENSGT00940000155591.i.g	ENSGT00940000159729.g	ENSGT00530000063405.b.f.d	ENSGT00950000183155.a.a.a.b.b	ENSGT00940000155545.b.d.a	ENSGT01010000222313.A.b.b.b.a.d	ENSGT00390000016067.p	ENSGT00940000153592.B.a.cb	ENSGT01030000234555.a.a.a.c.a.g	ENSGT00390000017523.c	ENSGT00950000183135.A.a.o	ENSGT00990000205129	ENSGT00940000153491.b.b.a.g.a	ENSGT00390000001189.a.b	ENSGT00390000017214 #22	ENSGT00390000018151.e	ENSGT00990000203589.a.a.d	ENSGT00390000015077.h	ENSGT00940000161069.a.a	ENSGT00940000159256.o.o.b	ENSGT00940000160330.j	ENSGT00940000158431.a.a.a.a.b.a.c.b.f	ENSGT00390000005826.a.a.l.a	ENSGT00500000044869.a.b.q	ENSGT00390000017045.m	ENSGT00950000182946.lb.a.f.a	ENSGT00940000157823.jb.a	ENSGT00440000037341.b.b.d	ENSGT00940000154849.a.f	ENSGT00940000160764.d
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	94	CNTRL (ENSSGRG00000028420)	rab14 (ENSSGRG00000028422)	gsnb (ENSSGRG00000028505)	ENSSGRG00000028758	ENSSGRG00000028760	TBCEL (ENSSGRG00000028762)	TECTA (ENSSGRG00000028764)	ENSSGRG00000028768	ENSSGRG00000028962	TIMM22 (ENSSGRG00000028964)	SPECC1 (ENSSGRG00000028965)	adora2b (ENSSGRG00000028966)	zswim7 (ENSSGRG00000028969)	ENSSGRG00000028998	aspa (ENSSGRG00000031150)	zgc:85789 (ENSSGRG00000031159) #22	ENSSGRG00000031192	ENSSGRG00000031193	ENSSGRG00000031195	AKAP10 (ENSSGRG00000031205)	selenow1 (ENSSGRG00000031271)	EHD2 (ENSSGRG00000031275)	ENSSGRG00000031412	napaa (ENSSGRG00000031417)	ENSSGRG00000031739	SYMPK (ENSSGRG00000031746)	ENSSGRG00000032809	im:7138535 (ENSSGRG00000032811)	ENSSGRG00000032812	RASL10B (ENSSGRG00000032813)	ap2b1 (ENSSGRG00000032854)
Golden-line barbel	MODERN SPECIES	202	ENSSGRG00000009738	rab14 (ENSSGRG00000009706)	gsnb (ENSSGRG00000008720)	ENSSGRG00000008706	TBCEL (ENSSGRG00000008704)	TECTA (ENSSGRG00000008683)	ENSSGRG00000008678	TIMM22 (ENSSGRG00000008672)	SPECC1 (ENSSGRG00000008669)	adora2b (ENSSGRG00000008667)	ENSSGRG00000008665	ENSSGRG00000008663	ABR (ENSSGRG00000005790)	aspa (ENSSGRG00000005755)	ENSSGRG00000005754	zgc:85789 (ENSSGRG00000005753) #22	ENSSGRG00000005739	ENSSGRG00000005735	ENSSGRG00000005733	AKAP10 (ENSSGRG00000005599)	ENSSGRG00000005593	EHD2 (ENSSGRG00000005063)	ENSSGRG00000005057	napaa (ENSSGRG00000005054)	ENSSGRG00000005050	SYMPK (ENSSGRG00000005045)	ENSSGRG00000005039	HNRNPUL1 (ENSSGRG00000005034)	im:7138535 (ENSSGRG00000005033)	ENSSGRG00000005031	RASL10B (ENSSGRG00000005030)
Common carp reference	MODERN SPECIES	7	CNTRL (ENSCCRG00000053196)	rab14 (ENSCCRG00000042187)	gsnb (ENSCCRG00000041230)	ENSCCRG00000026371	ENSCCRG00000054381	ENSCCRG00000026398	ENSCCRG00000014729	ENSCCRG00000063549	ENSCCRG00000080638	ENSCCRG00000014880	zswim7 (ENSCCRG00000066509)	ENSCCRG00000014926	ENSCCRG00000014932	ENSCCRG00000047806	aspa (ENSCCRG00000066540)	zgc:85789 (ENSCCRG00000025392) #22	ENSCCRG00000025384	ENSCCRG00000076793	ENSCCRG00000014943	selenow1 (ENSCCRG00000014951)	ENSCCRG00000072568	ENSCCRG00000068304	napaa (ENSCCRG00000015245)	ENSCCRG00000015311	ENSCCRG00000015495	ENSCCRG00000054409	im:7138535 (ENSCCRG00000021102)	ENSCCRG00000015509	RASL10B (ENSCCRG00000015525)	ap2b1 (ENSCCRG00000042700)	pex12 (ENSCCRG00000044463)
Zebrafish	MODERN SPECIES	20	ENSDARG00000094107	TBCEL (ENSDARG00000019525)	TECTA (ENSDARG00000059558)	ENSDARG00000074120	ENSDARG00000114187	ENSDARG00000098860	TIMM22 (ENSDARG00000091413)	SPECC1 (ENSDARG00000029480)	adora2b (ENSDARG00000002533)	zswim7 (ENSDARG00000067608)	ENSDARG00000116802	abr (ENSDARG00000095180)	ABR (ENSDARG00000059587)	aspa (ENSDARG00000005154)	pho (ENSDARG00000035133)	C5H11orf54 (ENSDARG00000110147) #22	ENSDARG00000098537	ENSDARG00000094587	AKAP10 (ENSDARG00000059549)	selenow1 (ENSDARG00000035136)	EHD2 (ENSDARG00000035137)	ENSDARG00000052188	ENSDARG00000094214	napaa (ENSDARG00000067605)	RSPH6A (ENSDARG00000067606)	SYMPK (ENSDARG00000059553)	ENSDARG00000088069	ENSDARG00000079780	im:7138535 (ENSDARG00000057245)	ENSDARG00000073860	RASL10B (ENSDARG00000109436)
Euteleosteomorpha	ANCESTRAL SPECIES	35	ENSGT00940000157820.a.b	ENSGT00390000003405	ENSGT00940000161539	ENSGT00940000162007	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00990000205129	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00950000183166.a.a.a.b.e.b	ENSGT00940000177608	ENSGT00950000183166.a.a.a.a	ENSGT00390000015991	ENSGT00390000007230.a	ENSGT00940000155062.b.d.b	ENSGT00940000156740	ENSGT00390000013680.b.a	ENSGT00390000011888	ENSGT00940000154823	ENSGT00940000154829.i.a	ENSGT00950000182952.A.b
Protacanthopterygii	ANCESTRAL SPECIES	63	ENSGT00530000063811.A.a.a	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000162439	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067.e	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00950000183166.a.a.a.b.e.b	ENSGT00390000015991	ENSGT00390000007230.a	ENSGT00940000155062.b.d.b	ENSGT00940000156740	ENSGT00390000013680.b.a	ENSGT00390000011888	ENSGT00940000154823	ENSGT00940000154829.i.a	ENSGT00950000182952.A.b	ENSGT00390000002429	ENSGT00940000159908
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	62																ENSGT00390000017214.c #22	ENSGT00390000015077.j	ENSGT00990000203589.a.a.a.b	ENSGT00390000018151.h	ENSGT00950000183166.a.a.a.b.e.b.f.b	ENSGT00390000015991.w	ENSGT00390000007230.a.b	ENSGT00940000155062.b.d.b.b	ENSGT00940000156740.x	ENSGT00390000013680.b.a.d	ENSGT00390000011888	ENSGT00940000154823.e.a	ENSGT00940000154829.i.a.f	ENSGT00950000182952.A.b.c	ENSGT00390000002429.f	ENSGT00940000159908.j
Salmoninae_a	ANCESTRAL SPECIES	55	ENSGT00940000158512.b.h	ENSGT01000000214434.E.a	ENSGT00390000003917.l	ENSGT01020000230351.E.d.f	ENSGT00940000163900	ENSGT00390000003183.w	ENSGT00390000003183.x	ENSGT00390000018434	ENSGT00940000155093.b.vb	ENSGT00390000017523.a	ENSGT01030000234555.a.a.a.c.a.q.a	ENSGT00940000153592.B.a.x	ENSGT00390000016067.f	ENSGT00990000205129	ENSGT00940000153491.b.b.a.c.b	ENSGT00390000017214.c #22	ENSGT00390000015077.j	ENSGT00990000203589.a.a.a.b	ENSGT00390000018151.h	ENSGT00950000183166.a.a.a.b.e.b.f.b	ENSGT00390000015991.w	ENSGT00390000007230.a.b	ENSGT00940000155062.b.d.b.b	ENSGT00940000156740.x	ENSGT00390000013680.b.a.d	ENSGT00390000011888	ENSGT00940000154823.e.a	ENSGT00940000154829.i.a.f	ENSGT00950000182952.A.b.c	ENSGT00390000002429.f	ENSGT00940000159908.j
Oncorhynchus	ANCESTRAL SPECIES	21	ENSGT01000000214434.E.a	ENSGT00390000003917.l	ENSGT01020000230351.E.d.f	ENSGT00940000163680	ENSGT00390000003183.w	ENSGT00940000163900	ENSGT00390000003183.x	ENSGT00390000018434	ENSGT00940000155093.b.vb	ENSGT00390000017523.a	ENSGT01030000234555.a.a.a.c.a.q.a	ENSGT00940000153592.B.a.x	ENSGT00390000016067.f	ENSGT00990000205129	ENSGT00940000153491.b.b.a.c.b	ENSGT00390000017214.c #22	ENSGT00390000015077.j	ENSGT00990000203589.a.a.a.b	ENSGT00390000018151.h	ENSGT00950000183166.a.a.a.b.e.b.f.b	ENSGT00390000015991.w	ENSGT00390000007230.a.b	ENSGT00940000155062.b.d.b.b	ENSGT00940000156740.x	ENSGT00390000013680.b.a.d	ENSGT00390000011888.c	ENSGT00940000154823.e.a	ENSGT00940000154829.i.a.f	ENSGT00950000182952.A.b.c	ENSGT00390000002429.f	ENSGT00940000159908.j
Oncorhynchus_a	ANCESTRAL SPECIES	19	ENSGT00940000158512.b.h	ENSGT01000000214434.E.a	ENSGT00390000003917.l	ENSGT01020000230351.E.d.f	ENSGT00940000163680	ENSGT00390000003183.w	ENSGT00390000003183.x	ENSGT00390000018434	ENSGT00940000155093.b.vb	ENSGT00390000017523.a	ENSGT01030000234555.a.a.a.c.a.q.a	ENSGT00940000153592.B.a.x	ENSGT00390000016067.f	ENSGT00990000205129	ENSGT00940000153491.b.b.a.c.b	ENSGT00390000017214.c #22	ENSGT00390000015077.j	ENSGT00990000203589.a.a.a.b	ENSGT00390000018151.h	ENSGT00950000183166.a.a.a.b.e.b.f.b	ENSGT00390000015991.w	ENSGT00390000007230.a.b	ENSGT00940000155062.b.d.b.b	ENSGT00940000156740.x	ENSGT00390000013680.b.a.d	ENSGT00390000011888.c	ENSGT00940000154823.e.a	ENSGT00940000154829.i.a.f	ENSGT00950000182952.A.b.c	ENSGT00390000002429.f	ENSGT00940000159908.j
Coho salmon	MODERN SPECIES	26	trpv1 (ENSOKIG00005026513)	SHPK (ENSOKIG00005026502)	emc6 (ENSOKIG00005026498)	p2rx5 (ENSOKIG00005026451)	ENSOKIG00005026432	ENSOKIG00005026425	CENPV (ENSOKIG00005026299)	pigl (ENSOKIG00005026224)	ncor1 (ENSOKIG00005025038)	zswim7 (ENSOKIG00005024904)	adora2b (ENSOKIG00005024897)	SPECC1 (ENSOKIG00005024878)	TIMM22 (ENSOKIG00005024857)	ENSOKIG00005024842	ABR (ENSOKIG00005020014)	zgc:85789 (ENSOKIG00005019734) #22	ENSOKIG00005019725	AKAP10 (ENSOKIG00005018678)	ENSOKIG00005018591	ENSOKIG00005018585	cltca (ENSOKIG00005015984)	ptrh2 (ENSOKIG00005015864)	ENSOKIG00005015845	ENSOKIG00005014899	ENSOKIG00005014840	rnft1 (ENSOKIG00005014815)	ENSOKIG00005014806	med13a (ENSOKIG00005013432)	ints2 (ENSOKIG00005012876)	AUTS2 (ENSOKIG00005011653)	cxadr (ENSOKIG00005011492)
Chinook salmon	MODERN SPECIES	33	SHPK (ENSOTSG00005036149)	emc6 (ENSOTSG00005036148)	p2rx5 (ENSOTSG00005036147)	ENSOTSG00005036145	ENSOTSG00005036144	ENSOTSG00005035998	ENSOTSG00005036107	pigl (ENSOTSG00005035997)	ncor1 (ENSOTSG00005035193)	zswim7 (ENSOTSG00005035163)	adora2b (ENSOTSG00005035162)	SPECC1 (ENSOTSG00005035161)	TIMM22 (ENSOTSG00005035160)	ENSOTSG00005035159	ABR (ENSOTSG00005026479)	zgc:85789 (ENSOTSG00005026466) #22	AKAP10 (ENSOTSG00005026463)	ENSOTSG00005026460	ENSOTSG00005026457	ENSOTSG00005026453	cltca (ENSOTSG00005026215)	ptrh2 (ENSOTSG00005026201)	ENSOTSG00005026199	ENSOTSG00005026104	rnft1 (ENSOTSG00005026103)	ints2 (ENSOTSG00005041108)	AUTS2 (ENSOTSG00005041105)	ENSOTSG00005041103	cxadr (ENSOTSG00005041102)	btg3 (ENSOTSG00005041099)	zgc:110006 (ENSOTSG00005041097)
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000026230	emc6 (ENSOMYG00000026220)	p2rx5 (ENSOMYG00000026202)	ubb (ENSOMYG00000073366)	CENPV (ENSOMYG00000070073)	pigl (ENSOMYG00000026070)	ncor1 (ENSOMYG00000024730)	zswim7 (ENSOMYG00000024100)	adora2b (ENSOMYG00000024093)	ENSOMYG00000052357	ENSOMYG00000024077	ENSOMYG00000059710	ENSOMYG00000043745	ENSOMYG00000024049	ENSOMYG00000041733	ENSOMYG00000041492 #22	ENSOMYG00000041273	ENSOMYG00000060533	ENSOMYG00000071231	ENSOMYG00000041244	ENSOMYG00000041236	ENSOMYG00000055010	cltca (ENSOMYG00000041153)	ptrh2 (ENSOMYG00000041111)	ENSOMYG00000041106	ENSOMYG00000048146	ENSOMYG00000040837	ENSOMYG00000062411	rnft1 (ENSOMYG00000040786)	med13a (ENSOMYG00000040547)	ints2 (ENSOMYG00000040354)
Salmo	ANCESTRAL SPECIES	13	ENSGT00530000063811.A.a.a.b	ENSGT00940000158512.b.h	ENSGT01000000214434.E.a	ENSGT00390000003917.l	ENSGT01020000230351.E.d.f	ENSGT00940000163900	ENSGT00390000003183.w	ENSGT00390000003183.x	ENSGT00390000018434	ENSGT00940000155093.b.vb	ENSGT00390000017523.a	ENSGT01030000234555.a.a.a.c.a.q.a	ENSGT00940000153592.B.a.x	ENSGT00390000016067.f	ENSGT00940000153491.b.b.a.c.b	ENSGT00390000017214.c #22	ENSGT00390000015077.j	ENSGT00990000203589.a.a.a.b	ENSGT00390000018151.h	ENSGT00950000183166.a.a.a.b.e.b.f.b	ENSGT00390000015991.w	ENSGT00390000007230.a.b	ENSGT00940000155062.b.d.b.b	ENSGT00940000156740.x	ENSGT00390000013680.b.a.d	ENSGT00390000011888	ENSGT00940000154823.e.a	ENSGT00940000154829.i.a.f	ENSGT00950000182952.A.b.c	ENSGT00390000002429.f	ENSGT00940000159908.j
Atlantic salmon	MODERN SPECIES	4	ENSSSAG00000097390	p2rx5 (ENSSSAG00000085000)	ENSSSAG00000004303	ENSSSAG00000107402	ENSSSAG00000112103	ENSSSAG00000091132	PIGL (ENSSSAG00000008535)	ncor1 (ENSSSAG00000009157)	zswim7 (ENSSSAG00000048680)	adora2b (ENSSSAG00000093669)	ENSSSAG00000121257	ENSSSAG00000100834	ENSSSAG00000048700	TIM22 (ENSSSAG00000048705)	ENSSSAG00000048882	ENSSSAG00000064271 #22	ENSSSAG00000064296	ENSSSAG00000119915	ENSSSAG00000088536	cltca (ENSSSAG00000064444)	ptrh2 (ENSSSAG00000069376)	ENSSSAG00000069379	ENSSSAG00000091537	ENSSSAG00000069400	rnft1 (ENSSSAG00000070020)	ENSSSAG00000106850	med13a (ENSSSAG00000070166)	ints2 (ENSSSAG00000083939)	ENSSSAG00000117357	ENSSSAG00000074056	cxadr (ENSSSAG00000103314)
River trout	MODERN SPECIES	6	eral1 (ENSSTUG00000013372)	fam222ba (ENSSTUG00000013554)	trpv1 (ENSSTUG00000013562)	SHPK (ENSSTUG00000013574)	emc6 (ENSSTUG00000013582)	p2rx5 (ENSSTUG00000013585)	ENSSTUG00000013602	CENPV (ENSSTUG00000013611)	pigl (ENSSTUG00000013665)	ncor1 (ENSSTUG00000013753)	zswim7 (ENSSTUG00000014972)	adora2b (ENSSTUG00000014986)	SPECC1 (ENSSTUG00000015003)	ENSSTUG00000015062	ENSSTUG00000015143	zgc:85789 (ENSSTUG00000016858) #22	AKAP10 (ENSSTUG00000016934)	ENSSTUG00000017888	ENSSTUG00000017895	cltca (ENSSTUG00000017945)	ptrh2 (ENSSTUG00000018545)	ENSSTUG00000018549	VMP1 (ENSSTUG00000018553)	ENSSTUG00000018578	ENSSTUG00000018596	rnft1 (ENSSTUG00000018877)	med13a (ENSSTUG00000018954)	ENSSTUG00000019600	ints2 (ENSSTUG00000019625)	ENSSTUG00000020439	AUTS2 (ENSSTUG00000020449)
Huchen	MODERN SPECIES	1347															ENSHHUG00000027381	zgc:85789 (ENSHHUG00000027383) #22	AKAP10 (ENSHHUG00000027530)	ENSHHUG00000027559	ENSHHUG00000027564
Salmoninae	ANCESTRAL SPECIES	534								ENSGT01020000230351.E.d.e	ENSGT00940000155093.b.wb	ENSGT00390000017523.b	ENSGT01030000234555.a.a.a.c.a.q.b	ENSGT00940000153592.B.a.w	ENSGT00390000016067.e	ENSGT00940000153491.b.b.a.c.a	ENSGT00390000001189.a	ENSGT00390000017214.d #22	ENSGT00390000015077.i	ENSGT00990000203589.a.a.a.a	ENSGT00390000018151.g	ENSGT00950000183166.a.a.a.b.e.b.f.a	ENSGT00390000015991.x	ENSGT00390000007230.a.a	ENSGT00940000155062.b.d.b.a	ENSGT00940000156740.w	ENSGT00390000013680.b.a.c	ENSGT00940000175044
Salmoninae_a	ANCESTRAL SPECIES	4	ENSGT00560000077232.B.g.b.b	ENSGT00940000164254.b	ENSGT00390000013800.d	ENSGT00530000063811.A.a.a.a	ENSGT00940000158512.b.g	ENSGT01000000214434.E.b	ENSGT00390000003917.k	ENSGT01020000230351.E.d.e	ENSGT00940000155093.b.wb	ENSGT00390000017523.b	ENSGT01030000234555.a.a.a.c.a.q.b	ENSGT00940000153592.B.a.w	ENSGT00390000016067.e	ENSGT00940000153491.b.b.a.c.a	ENSGT00390000001189.a	ENSGT00390000017214.d #22	ENSGT00390000015077.i	ENSGT00990000203589.a.a.a.a	ENSGT00390000018151.g	ENSGT00950000183166.a.a.a.b.e.b.f.a	ENSGT00390000015991.x	ENSGT00390000007230.a.a	ENSGT00940000155062.b.d.b.a	ENSGT00940000156740.w	ENSGT00390000013680.b.a.c	ENSGT00940000175044	ENSGT00940000154823.e.b	ENSGT00940000154829.i.a.e	ENSGT00950000182952.A.b.d.a	ENSGT00390000002429.e	ENSGT00940000159908.i
Salmo	ANCESTRAL SPECIES	17	ENSGT00940000164254.b	ENSGT00390000013800.d	ENSGT00530000063811.A.a.a.a	ENSGT00940000158512.b.g	ENSGT01000000214434.E.b	ENSGT00390000003917.k	ENSGT01020000230351.E.d.e	ENSGT00940000162439	ENSGT00940000155093.b.wb	ENSGT00990000213466	ENSGT01030000234555.a.a.a.c.a.q.b	ENSGT00940000153592.B.a.w	ENSGT00390000016067.e	ENSGT00940000153491.b.b.a.c.a	ENSGT00390000001189.a	ENSGT00390000017214.d #22	ENSGT00390000015077.i	ENSGT00990000203589.a.a.a.a	ENSGT00390000018151.g	ENSGT00950000183166.a.a.a.b.e.b.f.a	ENSGT00390000015991.x	ENSGT00390000007230.a.a	ENSGT00940000155062.b.d.b.a	ENSGT00940000156740.w	ENSGT00390000013680.b.a.c	ENSGT00940000175044	ENSGT00940000154823.e.b	ENSGT00940000154829.i.a.e	ENSGT00950000182952.A.b.d.a	ENSGT00390000002429.e	ENSGT00940000159908.i
Atlantic salmon	MODERN SPECIES	23	tbx16l (ENSSSAG00000087604)	eral1 (ENSSSAG00000004661)	fam222ba (ENSSSAG00000004649)	trpv1 (ENSSSAG00000004561)	ENSSSAG00000004481	TMM93 (ENSSSAG00000110093)	p2rx5 (ENSSSAG00000008442)	ENSSSAG00000100741	ENSSSAG00000004012	ENSSSAG00000003967	adora2b (ENSSSAG00000003962)	ENSSSAG00000003917	ENSSSAG00000003899	ENSSSAG00000001855	ENSSSAG00000001742	zgc:85789 (ENSSSAG00000001728) #22	ENSSSAG00000001634	ENSSSAG00000118930	ENSSSAG00000001611	ENSSSAG00000120532	cltca (ENSSSAG00000000892)	ptrh2 (ENSSSAG00000000541)	ENSSSAG00000117760	ENSSSAG00000098489	ENSSSAG00000076220	rnft1 (ENSSSAG00000076196)	med13a (ENSSSAG00000073075)	ENSSSAG00000072966	ENSSSAG00000072299	ENSSSAG00000072270	cxadr (ENSSSAG00000116551)
River trout	MODERN SPECIES	10	tbx16l (ENSSTUG00000011139)	eral1 (ENSSTUG00000011145)	fam222ba (ENSSTUG00000011154)	trpv1 (ENSSTUG00000011165)	emc6 (ENSSTUG00000011253)	p2rx5 (ENSSTUG00000011256)	ENSSTUG00000011292	ncor1 (ENSSTUG00000011408)	ENSSTUG00000011698	adora2b (ENSSTUG00000011703)	SPECC1 (ENSSTUG00000011715)	TIMM22 (ENSSTUG00000011756)	ABR (ENSSTUG00000011857)	ENSSTUG00000016705	aspa (ENSSTUG00000016720)	zgc:85789 (ENSSTUG00000016825) #22	AKAP10 (ENSSTUG00000016877)	ENSSTUG00000016911	ENSSTUG00000016928	cltca (ENSSTUG00000017001)	ptrh2 (ENSSTUG00000018991)	VMP1 (ENSSTUG00000019009)	ENSSTUG00000019094	rnft1 (ENSSTUG00000019450)	med13a (ENSSTUG00000019529)	ENSSTUG00000020980	ENSSTUG00000020996	AUTS2 (ENSSTUG00000021010)	cxadr (ENSSTUG00000021277)	btg3 (ENSSTUG00000021287)	zgc:110006 (ENSSTUG00000021309)
Huchen	MODERN SPECIES	4343														ENSHHUG00000038133	aspa (ENSHHUG00000038164)	zgc:85789 (ENSHHUG00000038180) #22	AKAP10 (ENSHHUG00000038285)
Northern pike	MODERN SPECIES	6	emc6 (ENSELUG00000021916)	p2rx5 (ENSELUG00000021923)	UBB (ENSELUG00000025533)	tfip11 (ENSELUG00000022017)	CENPV (ENSELUG00000022035)	pigl (ENSELUG00000022124)	ncor1 (ENSELUG00000022203)	zswim7 (ENSELUG00000022232)	SPECC1 (ENSELUG00000022344)	timm22 (ENSELUG00000033173)	ABR (ENSELUG00000022656)	ENSELUG00000033538	ENSELUG00000027338	ENSELUG00000029329	aspa (ENSELUG00000022701)	lg07h11orf54 (ENSELUG00000022777) #22	AKAP10 (ENSELUG00000022856)	ENSELUG00000022872	ENSELUG00000022891	cltca (ENSELUG00000022973)	ptrh2 (ENSELUG00000023013)	VMP1 (ENSELUG00000023055)	ENSELUG00000023112	rnft1 (ENSELUG00000023126)	med13a (ENSELUG00000023312)	ints2 (ENSELUG00000023402)	AUTS2 (ENSELUG00000023517)	ENSELUG00000027999	cxadr (ENSELUG00000023548)	zgc:110006 (ENSELUG00000023572)	ENSELUG00000023575
Acanthomorphata	ANCESTRAL SPECIES	14	ENSGT00940000157820.a.b	ENSGT00390000003405	ENSGT00940000161539	ENSGT00940000162007	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00990000205129	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00950000183166.a.a.a.b.e.b	ENSGT00940000177608	ENSGT00950000183166.a.a.a.a	ENSGT00390000015991	ENSGT00390000007230.a	ENSGT00940000155062.b.d.b	ENSGT00940000154203	ENSGT00940000156740	ENSGT00390000013680.b.a	ENSGT00390000011888	ENSGT00940000154823	ENSGT00940000154829.i.a
Euacanthomorphacea	ANCESTRAL SPECIES	19	ENSGT00940000163355	ENSGT00940000162439	ENSGT00940000155571.A	ENSGT00940000157820.a.b	ENSGT00940000163680	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00990000205129	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00950000183166.a.a.a.b.e.b	ENSGT00940000177608	ENSGT00950000183166.a.a.a.a	ENSGT00390000015991	ENSGT00390000007230.a	ENSGT00940000155062.b.d.b	ENSGT00940000154203	ENSGT00940000156740	ENSGT00390000013680.b.a	ENSGT00390000011888	ENSGT00940000154823	ENSGT00940000154829.i.a
Percomorphaceae	ANCESTRAL SPECIES	9	ENSGT00940000157820.a.a	ENSGT00940000163355	ENSGT00940000162439	ENSGT00940000157820.a.b	ENSGT00940000163680	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00990000205129	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	455	MTMR4 (ENSHCOG00000010677)	ca4a (ENSHCOG00000010648)	ENSHCOG00000010580	frmd8 (ENSHCOG00000010570)	rom1a (ENSHCOG00000010559)	zfpl1 (ENSHCOG00000010546)	FLRT1 (ENSHCOG00000010522)	rps6ka4 (ENSHCOG00000010506)	stip1 (ENSHCOG00000010419)	ENSHCOG00000010358	ENSHCOG00000010333	AKAP10 (ENSHCOG00000010308)	ABR (ENSHCOG00000010285)	aspa (ENSHCOG00000010167)	ENSHCOG00000010138 #22	zgc:85789 (ENSHCOG00000010120) #22	ENSHCOG00000010104	TIMM22 (ENSHCOG00000010091)	SPECC1 (ENSHCOG00000010060)	adora2b (ENSHCOG00000010020)	zswim7 (ENSHCOG00000010012)	ncor1 (ENSHCOG00000009960)	pigl (ENSHCOG00000009846)	CENPV (ENSHCOG00000009832)	UBB (ENSHCOG00000009816)	ENSHCOG00000009808	p2rx5 (ENSHCOG00000009772)	emc6 (ENSHCOG00000009420)	SHPK (ENSHCOG00000009408)	trpv1 (ENSHCOG00000009383)	fam222ba (ENSHCOG00000009325)
Tiger tail seahorse	MODERN SPECIES	455	hpda (ENSHCOG00000010695)	MTMR4 (ENSHCOG00000010677)	ca4a (ENSHCOG00000010648)	ENSHCOG00000010580	frmd8 (ENSHCOG00000010570)	rom1a (ENSHCOG00000010559)	zfpl1 (ENSHCOG00000010546)	FLRT1 (ENSHCOG00000010522)	rps6ka4 (ENSHCOG00000010506)	stip1 (ENSHCOG00000010419)	ENSHCOG00000010358	ENSHCOG00000010333	AKAP10 (ENSHCOG00000010308)	ABR (ENSHCOG00000010285)	aspa (ENSHCOG00000010167)	ENSHCOG00000010138 #22	zgc:85789 (ENSHCOG00000010120) #22	ENSHCOG00000010104	TIMM22 (ENSHCOG00000010091)	SPECC1 (ENSHCOG00000010060)	adora2b (ENSHCOG00000010020)	zswim7 (ENSHCOG00000010012)	ncor1 (ENSHCOG00000009960)	pigl (ENSHCOG00000009846)	CENPV (ENSHCOG00000009832)	UBB (ENSHCOG00000009816)	ENSHCOG00000009808	p2rx5 (ENSHCOG00000009772)	emc6 (ENSHCOG00000009420)	SHPK (ENSHCOG00000009408)	trpv1 (ENSHCOG00000009383)
Percomorphaceae_B	ANCESTRAL SPECIES	10	ENSGT01020000230351.E.d	ENSGT00940000157820.a.a	ENSGT00940000163355	ENSGT00940000162439	ENSGT00940000157820.a.b	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00990000205129	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Percomorphaceae_C	ANCESTRAL SPECIES	10	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00940000162439	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00990000205129	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Percomorphaceae_D	ANCESTRAL SPECIES	16	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00990000205129	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Anabantaria	ANCESTRAL SPECIES	13	ENSGT00530000063811.A.a.a	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a.z	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Anabantoidei	ANCESTRAL SPECIES	12	ENSGT00530000063811.A.a.a	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a.z	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Climbing perch	MODERN SPECIES	5	ENSATEG00000006486	pigl (ENSATEG00000025589)	ENSATEG00000029928	ENSATEG00000006375	ENSATEG00000026890	ENSATEG00000006403	p2rx5 (ENSATEG00000028784)	ENSATEG00000006238	NCOR1 (ENSATEG00000006591)	zswim7 (ENSATEG00000007429)	adora2b (ENSATEG00000029624)	ENSATEG00000007446	TIMM22 (ENSATEG00000025274)	ENSATEG00000007506	ENSATEG00000007642	C11orf54 (ENSATEG00000007653) #22	ENSATEG00000007686	ENSATEG00000007698	ENSATEG00000007711	ENSATEG00000007739	ENSATEG00000007829	ENSATEG00000007946	ENSATEG00000007959	ENSATEG00000007971	frmd8 (ENSATEG00000008041)	ENSATEG00000008061	tm7sf2 (ENSATEG00000008123)	ENSATEG00000008142	ENSATEG00000008165	ENSATEG00000027324	ENSATEG00000008207
Siamese fighting fish	MODERN SPECIES	5	SHPK (ENSBSLG00000018567)	emc6 (ENSBSLG00000018565)	p2rx5 (ENSBSLG00000018381)	ubb (ENSBSLG00000018345)	CENPV (ENSBSLG00000018266)	pigl (ENSBSLG00000018215)	ncor1 (ENSBSLG00000016551)	zswim7 (ENSBSLG00000016534)	adora2b (ENSBSLG00000016533)	ENSBSLG00000016524	SPECC1 (ENSBSLG00000016532)	TIMM22 (ENSBSLG00000016517)	ENSBSLG00000016515	ABR (ENSBSLG00000014194)	aspa (ENSBSLG00000013807)	zgc:85789 (ENSBSLG00000013009) #22	AKAP10 (ENSBSLG00000013294)	ENSBSLG00000012995	ENSBSLG00000012991	stip1 (ENSBSLG00000012764)	rps6ka4 (ENSBSLG00000012394)	FLRT1 (ENSBSLG00000012359)	zfpl1 (ENSBSLG00000012351)	rom1a (ENSBSLG00000012305)	frmd8 (ENSBSLG00000012279)	vps51 (ENSBSLG00000012095)	tm7sf2 (ENSBSLG00000011994)	cnih2 (ENSBSLG00000011943)	slc8a4a (ENSBSLG00000011883)	ENSBSLG00000011867	gng3 (ENSBSLG00000011852)
Zig-zag eel	MODERN SPECIES	5	eral1 (ENSMAMG00000006623)	fam222ba (ENSMAMG00000006643)	trpv1 (ENSMAMG00000006671)	ENSMAMG00000026110	emc6 (ENSMAMG00000006715)	p2rx5 (ENSMAMG00000006719)	ubb (ENSMAMG00000007495)	pigl (ENSMAMG00000007512)	ncor1 (ENSMAMG00000007529)	zswim7 (ENSMAMG00000007757)	adora2b (ENSMAMG00000027137)	ENSMAMG00000007793	ENSMAMG00000007879	ENSMAMG00000007897	ENSMAMG00000026695	C11orf54 (ENSMAMG00000008031) #22	ENSMAMG00000008065	ENSMAMG00000008135	ENSMAMG00000008179	ENSMAMG00000008332	ENSMAMG00000008349	ENSMAMG00000008391	ENSMAMG00000008396	ENSMAMG00000008406	frmd8 (ENSMAMG00000008444)	ENSMAMG00000008455	tm7sf2 (ENSMAMG00000008485)	ENSMAMG00000008514	ENSMAMG00000008532	ENSMAMG00000008551	ENSMAMG00000008555
Carangaria	ANCESTRAL SPECIES	16	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00990000205129	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Carangaria_A	ANCESTRAL SPECIES	8	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00940000162439	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000178716	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Seriola	ANCESTRAL SPECIES	2	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000178716	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Yellowtail amberjack	MODERN SPECIES	2973	trpv1 (ENSSLDG00000019310)	SHPK (ENSSLDG00000019293)	emc6 (ENSSLDG00000019276)	p2rx5 (ENSSLDG00000019259)	ubb (ENSSLDG00000019238)	CENPV (ENSSLDG00000019225)	pigl (ENSSLDG00000019206)	ncor1 (ENSSLDG00000019120)	zswim7 (ENSSLDG00000019077)	adora2b (ENSSLDG00000019068)	SPECC1 (ENSSLDG00000019034)	TIMM22 (ENSSLDG00000019004)	ENSSLDG00000018982	ABR (ENSSLDG00000018937)	aspa (ENSSLDG00000018911)	zgc:85789 (ENSSLDG00000018881) #22	AKAP10 (ENSSLDG00000018855)	ENSSLDG00000018845	ENSSLDG00000018829	stip1 (ENSSLDG00000018782)	rps6ka4 (ENSSLDG00000018728)	FLRT1 (ENSSLDG00000018714)	zfpl1 (ENSSLDG00000018700)	rom1a (ENSSLDG00000018692)	frmd8 (ENSSLDG00000018679)	vps51 (ENSSLDG00000018625)	tm7sf2 (ENSSLDG00000018581)	CNIH2 (ENSSLDG00000018559)	slc8a4a (ENSSLDG00000018536)	ENSSLDG00000018524	gng3 (ENSSLDG00000018511)
Greater amberjack	MODERN SPECIES	39	fam222ba (ENSSDUG00000017104)	trpv1 (ENSSDUG00000017017)	SHPK (ENSSDUG00000017001)	emc6 (ENSSDUG00000016978)	p2rx5 (ENSSDUG00000016939)	ubb (ENSSDUG00000016923)	CENPV (ENSSDUG00000016911)	pigl (ENSSDUG00000016843)	ncor1 (ENSSDUG00000016746)	zswim7 (ENSSDUG00000016724)	adora2b (ENSSDUG00000016717)	SPECC1 (ENSSDUG00000016693)	TIMM22 (ENSSDUG00000016674)	ABR (ENSSDUG00000016486)	aspa (ENSSDUG00000016443)	zgc:85789 (ENSSDUG00000016431) #22	AKAP10 (ENSSDUG00000016371)	ENSSDUG00000016360	ENSSDUG00000016342	stip1 (ENSSDUG00000016317)	rps6ka4 (ENSSDUG00000016262)	FLRT1 (ENSSDUG00000016257)	zfpl1 (ENSSDUG00000016243)	rom1a (ENSSDUG00000016222)	frmd8 (ENSSDUG00000016200)	vps51 (ENSSDUG00000016170)	tm7sf2 (ENSSDUG00000016149)	CNIH2 (ENSSDUG00000016137)	slc8a4a (ENSSDUG00000016118)	ENSSDUG00000016104	gng3 (ENSSDUG00000016092)
Barramundi perch	MODERN SPECIES	94	fam222ba (ENSLCAG00010019014)	trpv1 (ENSLCAG00010019024)	SHPK (ENSLCAG00010019054)	emc6 (ENSLCAG00010019058)	p2rx5 (ENSLCAG00010019071)	UBB (ENSLCAG00010019079)	CENPV (ENSLCAG00010019085)	pigl (ENSLCAG00010019102)	ncor1 (ENSLCAG00010019211)	zswim7 (ENSLCAG00010019385)	adora2b (ENSLCAG00010019387)	SPECC1 (ENSLCAG00010019394)	TIMM22 (ENSLCAG00010019400)	ABR (ENSLCAG00010019477)	aspa (ENSLCAG00010019892)	zgc:85789 (ENSLCAG00010019896) #22	AKAP10 (ENSLCAG00010019909)	ENSLCAG00010019923	ENSLCAG00010019928	stip1 (ENSLCAG00010019952)	rps6ka4 (ENSLCAG00010020122)	zfpl1 (ENSLCAG00010020529)	rom1a (ENSLCAG00010020532)	frmd8 (ENSLCAG00010020535)	vps51 (ENSLCAG00010020544)	tm7sf2 (ENSLCAG00010020563)	cnih2 (ENSLCAG00010020567)	slc8a4a (ENSLCAG00010020577)	ENSLCAG00010020587	gng3 (ENSLCAG00010020589)	banf1 (ENSLCAG00010020590)
Pleuronectoidei	ANCESTRAL SPECIES	27	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00990000205129	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Turbot	MODERN SPECIES	16	ENSSMAG00000000289	emc6 (ENSSMAG00000000284)	p2rx5 (ENSSMAG00000000280)	ubb (ENSSMAG00000000274)	CENPV (ENSSMAG00000000190)	pigl (ENSSMAG00000000187)	ncor1 (ENSSMAG00000000093)	zswim7 (ENSSMAG00000020052)	adora2b (ENSSMAG00000020046)	adora2b (ENSSMAG00000035924)	ENSSMAG00000020003	ENSSMAG00000029646	ENSSMAG00000019970	ENSSMAG00000019876	ENSSMAG00000019855	zgc:85789 (ENSSMAG00000019842) #22	ENSSMAG00000019829	ENSSMAG00000036353	ENSSMAG00000037931	ENSSMAG00000019805	ENSSMAG00000019757	ENSSMAG00000019754	ENSSMAG00000019744	ENSSMAG00000019729	frmd8 (ENSSMAG00000019693)	vps51 (ENSSMAG00000019679)	tm7sf2 (ENSSMAG00000019655)	cnih2 (ENSSMAG00000023556)	ENSSMAG00000019600	ENSSMAG00000019594	ENSSMAG00000019589
Tongue sole	MODERN SPECIES	10	eral1 (ENSCSEG00000016147)	fam222ba (ENSCSEG00000016138)	trpv1 (ENSCSEG00000016124)	SHPK (ENSCSEG00000016107)	emc6 (ENSCSEG00000016096)	p2rx5 (ENSCSEG00000016083)	UBB (ENSCSEG00000016079)	pigl (ENSCSEG00000016072)	ncor1 (ENSCSEG00000015840)	zswim7 (ENSCSEG00000015811)	adora2b (ENSCSEG00000015808)	SPECC1 (ENSCSEG00000015802)	TIMM22 (ENSCSEG00000015773)	ABR (ENSCSEG00000015742)	aspa (ENSCSEG00000015727)	zgc:85789 (ENSCSEG00000015568) #22	AKAP10 (ENSCSEG00000015539)	ENSCSEG00000015530	ENSCSEG00000015520	stip1 (ENSCSEG00000015476)	rps6ka4 (ENSCSEG00000015452)	FLRT1 (ENSCSEG00000015447)	zfpl1 (ENSCSEG00000015433)	rom1a (ENSCSEG00000015421)	frmd8 (ENSCSEG00000015411)	vps51 (ENSCSEG00000015406)	tm7sf2 (ENSCSEG00000015386)	cnih2 (ENSCSEG00000015369)	slc8a4a (ENSCSEG00000015359)	ENSCSEG00000015350	ENSCSEG00000015339
Eupercaria	ANCESTRAL SPECIES	17	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00940000162439	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Tetraodontidae	ANCESTRAL SPECIES	28	ENSGT00940000155093.b	ENSGT00390000018434	ENSGT00390000003183	ENSGT00940000162439	ENSGT01020000230351.E.d	ENSGT00390000003917	ENSGT01000000214434.E	ENSGT00940000158512.b	ENSGT00530000063811.A.a.a	ENSGT00390000013800	ENSGT00560000077232.B.g.b	ENSGT00940000166243	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911
Fugu	MODERN SPECIES	6	pigl (ENSTRUG00000022527)	CENPV (ENSTRUG00000000676)	UBB (ENSTRUG00000020439)	p2rx5 (ENSTRUG00000000923)	emc6 (ENSTRUG00000000920)	SHPK (ENSTRUG00000000848)	trpv1 (ENSTRUG00000000719)	eral1 (ENSTRUG00000000660)	fam222ba (ENSTRUG00000000704)	flot2a (ENSTRUG00000000514)	ENSTRUG00000000382	TIMM22 (ENSTRUG00000001579)	ENSTRUG00000031682	ABR (ENSTRUG00000001060)	aspa (ENSTRUG00000001792)	zgc:85789 (ENSTRUG00000002162) #22	AKAP10 (ENSTRUG00000002489)	ENSTRUG00000030240	ENSTRUG00000028734	ENSTRUG00000003074	cxadr (ENSTRUG00000027492)	stip1 (ENSTRUG00000003192)	ENSTRUG00000030377	cxadr (ENSTRUG00000020955)	AUTS2 (ENSTRUG00000002035)	ints2 (ENSTRUG00000009276)	med13a (ENSTRUG00000008851)	ENSTRUG00000008847	rnft1 (ENSTRUG00000008753)	RPS6KB1 (ENSTRUG00000008385)	VMP1 (ENSTRUG00000031097)
Tetraodon	MODERN SPECIES	22	zswim7 (ENSTNIG00000008538)	ncor1 (ENSTNIG00000008537)	ENSTNIG00000008536	ENSTNIG00000019771	p2rx5 (ENSTNIG00000008535)	emc6 (ENSTNIG00000000877)	SHPK (ENSTNIG00000008534)	trpv1 (ENSTNIG00000008533)	fam222ba (ENSTNIG00000008532)	eral1 (ENSTNIG00000008531)	flot2a (ENSTNIG00000008530)	ENSTNIG00000008529	TIMM22 (ENSTNIG00000008528)	ABR (ENSTNIG00000006653)	aspa (ENSTNIG00000009903)	zgc:85789 (ENSTNIG00000009904) #22	AKAP10 (ENSTNIG00000009905)	stip1 (ENSTNIG00000009906)	or42b2 (ENSTNIG00000009907)	ENSTNIG00000009909	ENSTNIG00000001184	alox5ap (ENSTNIG00000009910)	ENSTNIG00000009911	b3glctb (ENSTNIG00000009912)	rxfp2a (ENSTNIG00000009913)	FRY (ENSTNIG00000009914)	zar1l (ENSTNIG00000009915)	PDS5B (ENSTNIG00000009916)	KL (ENSTNIG00000009917)	rfc3 (ENSTNIG00000009918)	ENSTNIG00000009919
Eupecaria_A	ANCESTRAL SPECIES	17	ENSGT00530000063811.A.a.a	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Eupecaria_B	ANCESTRAL SPECIES	17	ENSGT00530000063811.A.a.a	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Perciformes	ANCESTRAL SPECIES	25	ENSGT00530000063811.A.a.a	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Cottioidei	ANCESTRAL SPECIES	10	ENSGT00530000063811.A.a.a	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Stickleback	MODERN SPECIES	7	SHPK (ENSGACG00000020254)	emc6 (ENSGACG00000020255)	p2rx5 (ENSGACG00000020256)	ENSGACG00000020257	ENSGACG00000020258	CENPV (ENSGACG00000020259)	ENSGACG00000020260	zswim7 (ENSGACG00000020261)	adora2b (ENSGACG00000020262)	SPECC1 (ENSGACG00000020263)	TIMM22 (ENSGACG00000020264)	ABR (ENSGACG00000020265)	aspa (ENSGACG00000020266)	ENSGACG00000020267	ENSGACG00000020268	zgc:85789 (ENSGACG00000020269) #22	AKAP10 (ENSGACG00000020270)	ENSGACG00000020271	stip1 (ENSGACG00000020272)	rps6ka4 (ENSGACG00000020273)	FLRT1 (ENSGACG00000020274)	zfpl1 (ENSGACG00000020275)	ENSGACG00000020276	rom1a (ENSGACG00000020277)	frmd8 (ENSGACG00000020278)	vps51 (ENSGACG00000020279)	tm7sf2 (ENSGACG00000020280)	CNIH2 (ENSGACG00000020281)	slc8a4a (ENSGACG00000020282)	ENSGACG00000020283	gng3 (ENSGACG00000020284)
Lumpfish	MODERN SPECIES	5	fam222ba (ENSCLMG00005006555)	trpv1 (ENSCLMG00005005996)	SHPK (ENSCLMG00005005988)	emc6 (ENSCLMG00005005987)	p2rx5 (ENSCLMG00005005986)	ubb (ENSCLMG00005005983)	CENPV (ENSCLMG00005005813)	pigl (ENSCLMG00005005811)	ncor1 (ENSCLMG00005005658)	zswim7 (ENSCLMG00005005628)	adora2b (ENSCLMG00005005627)	SPECC1 (ENSCLMG00005005626)	TIMM22 (ENSCLMG00005005625)	ABR (ENSCLMG00005003287)	aspa (ENSCLMG00005003245)	zgc:85789 (ENSCLMG00005003241) #22	AKAP10 (ENSCLMG00005002229)	ENSCLMG00005002212	ENSCLMG00005002210	stip1 (ENSCLMG00005002028)	rps6ka4 (ENSCLMG00005001834)	FLRT1 (ENSCLMG00005001819)	zfpl1 (ENSCLMG00005001816)	rom1a (ENSCLMG00005001810)	frmd8 (ENSCLMG00005001809)	vps51 (ENSCLMG00005001652)	tm7sf2 (ENSCLMG00005001513)	cnih2 (ENSCLMG00005001463)	slc8a4a (ENSCLMG00005001440)	ENSCLMG00005001381	gng3 (ENSCLMG00005023148)
Perciformes_a	ANCESTRAL SPECIES	34													ENSGT00990000205129	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Pike perch	MODERN SPECIES	25	fam222ba (ENSSLUG00000006896)	trpv1 (ENSSLUG00000007024)	SHPK (ENSSLUG00000008533)	emc6 (ENSSLUG00000008536)	p2rx5 (ENSSLUG00000008547)	TIMM22 (ENSSLUG00000008585)	SPECC1 (ENSSLUG00000008593)	adora2b (ENSSLUG00000008622)	zswim7 (ENSSLUG00000008628)	ncor1 (ENSSLUG00000008713)	pigl (ENSSLUG00000009724)	CENPV (ENSSLUG00000009736)	ubb (ENSSLUG00000009817)	ABR (ENSSLUG00000010030)	aspa (ENSSLUG00000015018)	zgc:85789 (ENSSLUG00000015019) #22	AKAP10 (ENSSLUG00000015036)	ENSSLUG00000015188	ENSSLUG00000015195	stip1 (ENSSLUG00000015239)	rps6ka4 (ENSSLUG00000016139)	FLRT1 (ENSSLUG00000019080)	zfpl1 (ENSSLUG00000019083)	rom1a (ENSSLUG00000019088)	frmd8 (ENSSLUG00000019093)	vps51 (ENSSLUG00000019112)	tm7sf2 (ENSSLUG00000019154)	cnih2 (ENSSLUG00000019168)	slc8a4a (ENSSLUG00000019176)	ENSSLUG00000019180	gng3 (ENSSLUG00000019184)
Channel bull blenny	MODERN SPECIES	5	timm10b (ENSCGOG00000010052)	ILK (ENSCGOG00000010025)	smpd1 (ENSCGOG00000010023)	tpte (ENSCGOG00000010009)	fgl1b (ENSCGOG00000010006)	vps36 (ENSCGOG00000009316)	ENSCGOG00000009290	ENSCGOG00000009288	stoml3b (ENSCGOG00000009281)	ENSCGOG00000009277	ENSCGOG00000009275	ENSCGOG00000009274	ENSCGOG00000009273	ABR (ENSCGOG00000008376)	aspa (ENSCGOG00000008359)	zgc:85789 (ENSCGOG00000008278) #22	AKAP10 (ENSCGOG00000008261)	ENSCGOG00000008252	ENSCGOG00000008250	stip1 (ENSCGOG00000007403)	rps6ka4 (ENSCGOG00000006241)	FLRT1 (ENSCGOG00000006179)	zfpl1 (ENSCGOG00000006176)	rom1a (ENSCGOG00000006131)	frmd8 (ENSCGOG00000006047)	vps51 (ENSCGOG00000005778)	tm7sf2 (ENSCGOG00000005702)	cnih2 (ENSCGOG00000005689)	slc8a4a (ENSCGOG00000005681)	ENSCGOG00000005679	gng3 (ENSCGOG00000005672)
Eupecaria_C	ANCESTRAL SPECIES	15	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00940000162439	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	12	ENSGT00530000063811.A.a.a	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000162439	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Large yellow croaker	MODERN SPECIES	493	eral1 (ENSLCRG00005012427)	fam222ba (ENSLCRG00005012470)	trpv1 (ENSLCRG00005012509)	SHPK (ENSLCRG00005013581)	emc6 (ENSLCRG00005013584)	p2rx5 (ENSLCRG00005013586)	UBB (ENSLCRG00005013588)	CENPV (ENSLCRG00005013592)	pigl (ENSLCRG00005013650)	zswim7 (ENSLCRG00005013967)	adora2b (ENSLCRG00005013968)	SPECC1 (ENSLCRG00005013971)	TIMM22 (ENSLCRG00005013974)	ABR (ENSLCRG00005014012)	aspa (ENSLCRG00005017894)	zgc:85789 (ENSLCRG00005018209) #22	AKAP10 (ENSLCRG00005018212)	ENSLCRG00005018232	ENSLCRG00005018233	stip1 (ENSLCRG00005018249)	rps6ka4 (ENSLCRG00005018952)	zfpl1 (ENSLCRG00005020312)	rom1a (ENSLCRG00005020313)	frmd8 (ENSLCRG00005020316)	vps51 (ENSLCRG00005020324)	tm7sf2 (ENSLCRG00005020429)	CNIH2 (ENSLCRG00005020430)	slc8a4a (ENSLCRG00005020431)	ENSLCRG00005020433	banf1 (ENSLCRG00005020434)	gng3 (ENSLCRG00005020435)
Gilthead seabream	MODERN SPECIES	4	ENSSAUG00010003748	ENSSAUG00010003749	ENSSAUG00010003751	ENSSAUG00010003753	ENSSAUG00010003754	ENSSAUG00010003757	ENSSAUG00010003759	ENSSAUG00010003760	ENSSAUG00010003762	ENSSAUG00010003765	ENSSAUG00010003768	ENSSAUG00010003771	ENSSAUG00010003772	ENSSAUG00010003773	ENSSAUG00010003774	zgc:85789 (ENSSAUG00010003775) #22	AKAP10 (ENSSAUG00010003782)	ENSSAUG00010003926	ENSSAUG00010003929	stip1 (ENSSAUG00010003931)	rps6ka4 (ENSSAUG00010003972)	FLRT1 (ENSSAUG00010004411)	zfpl1 (ENSSAUG00010004412)	rom1a (ENSSAUG00010004415)	frmd8 (ENSSAUG00010004430)	vps51 (ENSSAUG00010004522)	tm7sf2 (ENSSAUG00010001453)	cnih2 (ENSSAUG00010001478)	slc8a4a (ENSSAUG00010001681)	ENSSAUG00010001687	gng3 (ENSSAUG00010001693)
Ballan wrasse	MODERN SPECIES	195																zgc:85789 (ENSLBEG00000003296) #22	AKAP10 (ENSLBEG00000003182)	ENSLBEG00000003117	ENSLBEG00000003094	stip1 (ENSLBEG00000003034)	rps6ka4 (ENSLBEG00000002940)	FLRT1 (ENSLBEG00000002921)	zfpl1 (ENSLBEG00000002900)	rom1a (ENSLBEG00000002840)	frmd8 (ENSLBEG00000002809)	vps51 (ENSLBEG00000002785)	tm7sf2 (ENSLBEG00000002743)	CNIH2 (ENSLBEG00000002702)	slc8a4a (ENSLBEG00000002660)	ENSLBEG00000002626	gng3 (ENSLBEG00000002607)
Ovalentaria	ANCESTRAL SPECIES	11	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000162439	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000178716	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Ovalentaria_B	ANCESTRAL SPECIES	16														ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Pomacentridae	ANCESTRAL SPECIES	10														ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Pomacentridae_A	ANCESTRAL SPECIES	3	ENSGT00940000167170	ENSGT00940000157165.e.b	ENSGT00950000182942.b.e	ENSGT00390000018633	ENSGT00940000156655	ENSGT00530000063691.b	ENSGT00530000063516.a.a.a.a	ENSGT00530000063516.a.b	ENSGT00940000158413.b	ENSGT00390000012877	ENSGT01030000234582.f.a.b	ENSGT01030000234582.e.b	ENSGT00530000063947.C.d	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Spiny chromis	DUPLICATION
Spiny chromis	MODERN SPECIES	3873																zgc:85789 (ENSAPOG00000013223) #22
Spiny chromis	MODERN SPECIES	612																zgc:85789 (ENSAPOG00000015333) #22	AKAP10 (ENSAPOG00000015291)	ENSAPOG00000015229	ENSAPOG00000015200	stip1 (ENSAPOG00000015018)	rps6ka4 (ENSAPOG00000014961)	FLRT1 (ENSAPOG00000014864)	zfpl1 (ENSAPOG00000014857)	rom1a (ENSAPOG00000014804)	frmd8 (ENSAPOG00000014738)	vps51 (ENSAPOG00000014725)
Amphiprion	ANCESTRAL SPECIES	3	ENSGT00940000167170	ENSGT00940000157165.e.b	ENSGT00950000182942.b.e	ENSGT00390000018633	ENSGT00940000156655	ENSGT00530000063691.b	ENSGT00530000063516.a.a.a.a	ENSGT00530000063516.a.b	ENSGT00940000158413.b	ENSGT00390000012877	ENSGT01030000234582.f.a.b	ENSGT01030000234582.e.b	ENSGT00530000063947.C.d	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Clown anemonefish	MODERN SPECIES	1312											mogat2 (ENSAOCG00000023357)	MAP6 (ENSAOCG00000002787)	ABR (ENSAOCG00000023301)	ENSAOCG00000023186	aspa (ENSAOCG00000023165)	zgc:85789 (ENSAOCG00000023146) #22	AKAP10 (ENSAOCG00000023109)	ENSAOCG00000023065	ENSAOCG00000023049	stip1 (ENSAOCG00000001662)	rps6ka4 (ENSAOCG00000022999)	FLRT1 (ENSAOCG00000022954)	zfpl1 (ENSAOCG00000022945)	rom1a (ENSAOCG00000022923)	frmd8 (ENSAOCG00000022879)	vps51 (ENSAOCG00000022852)	tm7sf2 (ENSAOCG00000022806)	CNIH2 (ENSAOCG00000022773)	slc8a4a (ENSAOCG00000022741)	ENSAOCG00000022708
Orange clownfish	MODERN SPECIES	6	ENSAPEG00000010596	B3GAT1 (ENSAPEG00000010567)	ENSAPEG00000010430	ei24 (ENSAPEG00000010387)	ENSAPEG00000010357	stt3a (ENSAPEG00000010284)	thap12a (ENSAPEG00000010273)	ENSAPEG00000010244	wnt11 (ENSAPEG00000010219)	uvrag (ENSAPEG00000010148)	dgat2 (ENSAPEG00000010128)	mogat2 (ENSAPEG00000010095)	MAP6 (ENSAPEG00000010082)	ABR (ENSAPEG00000009934)	aspa (ENSAPEG00000009885)	zgc:85789 (ENSAPEG00000009866) #22	AKAP10 (ENSAPEG00000009805)	ENSAPEG00000009766	ENSAPEG00000009701	stip1 (ENSAPEG00000009651)	rps6ka4 (ENSAPEG00000009598)	FLRT1 (ENSAPEG00000009566)	zfpl1 (ENSAPEG00000009554)	rom1a (ENSAPEG00000009539)	frmd8 (ENSAPEG00000009526)	vps51 (ENSAPEG00000009462)	tm7sf2 (ENSAPEG00000009415)	cnih2 (ENSAPEG00000009390)	slc8a4a (ENSAPEG00000009362)	ENSAPEG00000009325	gng3 (ENSAPEG00000009313)
Bicolor damselfish	MODERN SPECIES	666															aspa (ENSSPAG00000023448)	zgc:85789 (ENSSPAG00000023445) #22	AKAP10 (ENSSPAG00000023443)	ENSSPAG00000023441	ENSSPAG00000023439	stip1 (ENSSPAG00000023436)	rps6ka4 (ENSSPAG00000023434)	FLRT1 (ENSSPAG00000023432)	zfpl1 (ENSSPAG00000023431)	rom1a (ENSSPAG00000023430)	frmd8 (ENSSPAG00000023429)	vps51 (ENSSPAG00000023427)	tm7sf2 (ENSSPAG00000023425)
Cichlidae	ANCESTRAL SPECIES	4	ENSGT00940000164695.b	ENSGT00940000166868.a	ENSGT00940000154133.B	ENSGT00940000171396	ENSGT00940000155902.d	ENSGT00950000183097.a.a.a.f.a.a	ENSGT00940000155374.g.a	ENSGT00950000183031.B	ENSGT00950000182832.D.b	ENSGT00940000162488.b.a	ENSGT00950000183107.a.b.b	ENSGT00940000164304	ENSGT00390000005094.g	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Pseudocrenilabrinae	ANCESTRAL SPECIES	14	ENSGT00940000160599	ENSGT00940000164695.b	ENSGT00940000166868.a	ENSGT00940000154133.B	ENSGT00940000155902.d	ENSGT00950000183097.a.a.a.f.a.a	ENSGT00940000155374.g.a	ENSGT00950000183031.B	ENSGT00950000182832.D.b	ENSGT00940000162488.b.a	ENSGT00950000183107.a.b.b	ENSGT00940000164304	ENSGT00390000005094.g	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	21	ENSGT00940000164695.b	ENSGT00940000166868.a	ENSGT00940000154133.B	ENSGT00940000155902.d	ENSGT00950000183097.a.a.a.f.a.a	ENSGT00940000155374.g.a	ENSGT00950000183031.B	ENSGT00940000161206	ENSGT00950000182832.D.b	ENSGT00940000162488.b.a	ENSGT00950000183107.a.b.b	ENSGT00940000164304	ENSGT00390000005094.g	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00940000176839.c.b.a.b.b	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Haplochromini	ANCESTRAL SPECIES	8	ENSGT00940000160599	ENSGT00940000164695.b	ENSGT00940000166868.a	ENSGT00940000154133.B	ENSGT00940000155902.d	ENSGT00950000183097.a.a.a.f.a.a	ENSGT00940000155374.g.a	ENSGT00950000183031.B	ENSGT00950000182832.D.b	ENSGT00940000162488.b.a	ENSGT00950000183107.a.b.b	ENSGT00940000164304	ENSGT00390000005094.g	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00940000176839.c.b.a.b.b	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Haplochromini_A	ANCESTRAL SPECIES	6	ENSGT00940000164695.b	ENSGT00940000166868.a	ENSGT00940000154133.B	ENSGT00940000155902.d	ENSGT00950000183097.a.a.a.f.a.a	ENSGT00940000155374.g.a	ENSGT00950000183031.B	ENSGT00940000161206	ENSGT00950000182832.D.b	ENSGT00940000162488.b.a	ENSGT00950000183107.a.b.b	ENSGT00940000164304	ENSGT00390000005094.g	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00940000176839.c.b.a.b.b	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Haplochromini_B	ANCESTRAL SPECIES	26	ENSGT00940000164695.b	ENSGT00940000166868.a	ENSGT00940000154133.B	ENSGT00940000155902.d	ENSGT00950000183097.a.a.a.f.a.a	ENSGT00940000155374.g.a	ENSGT00950000183031.B	ENSGT00950000182832.D.b	ENSGT00940000162488.b.a	ENSGT00950000183107.a.b.b	ENSGT00940000164304	ENSGT00390000005094.g	ENSGT00390000013764.ab.a.a.b	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000162068.G.b.f.a	ENSGT00940000166053
Zebra mbuna	MODERN SPECIES	1092	pcolcea (ENSMZEG00005013775)	tmem88a (ENSMZEG00005013769)	kdm6bb (ENSMZEG00005013759)	ENSMZEG00005013750	nlgn2b (ENSMZEG00005013745)	FGF11 (ENSMZEG00005013737)	cldn7b (ENSMZEG00005013733)	npm1a (ENSMZEG00005013717)	kcnip1b (ENSMZEG00005013696)	HRH2 (ENSMZEG00005013687)	PCDHAC2 (ENSMZEG00005013682)	ENSMZEG00005013674	ENSMZEG00005013667	PCDH1 (ENSMZEG00005013663)	ENSMZEG00005013658	zgc:85789 (ENSMZEG00005013643) #22	AKAP10 (ENSMZEG00005013626)	ENSMZEG00005013597	ENSMZEG00005013586	stip1 (ENSMZEG00005013574)	rps6ka4 (ENSMZEG00005013541)	FLRT1 (ENSMZEG00005013528)	zfpl1 (ENSMZEG00005013521)	rom1a (ENSMZEG00005013515)	frmd8 (ENSMZEG00005013504)	vps51 (ENSMZEG00005013481)	tm7sf2 (ENSMZEG00005013458)	CNIH2 (ENSMZEG00005013449)	slc8a4a (ENSMZEG00005013306)	ENSMZEG00005013296	ENSMZEG00005013283
Eastern happy	MODERN SPECIES	1	ccdc61 (ENSACLG00000011115)	ENSACLG00000011009	pls3 (ENSACLG00000010949)	CNGA2 (ENSACLG00000010498)	rraga (ENSACLG00000010458)	chmp1b (ENSACLG00000010431)	ENSACLG00000010424	BRWD3 (ENSACLG00000010338)	ENSACLG00000010333	npas2 (ENSACLG00000010323)	ENSACLG00000010312	ENSACLG00000010311	ABR (ENSACLG00000010175)	aspa (ENSACLG00000010151)	ENSACLG00000010145	zgc:85789 (ENSACLG00000010122) #22	AKAP10 (ENSACLG00000010086)	ENSACLG00000010069	ENSACLG00000009843	stip1 (ENSACLG00000009800)	rps6ka4 (ENSACLG00000009762)	FLRT1 (ENSACLG00000009752)	zfpl1 (ENSACLG00000009747)	rom1a (ENSACLG00000009739)	frmd8 (ENSACLG00000009732)	vps51 (ENSACLG00000009713)	tm7sf2 (ENSACLG00000009702)	cnih2 (ENSACLG00000009695)	slc8a4a (ENSACLG00000009678)	ENSACLG00000009674	ENSACLG00000009666
P. nyererei	MODERN SPECIES	544																zgc:85789 (ENSPNYG00000023030) #22	AKAP10 (ENSPNYG00000023038)	ENSPNYG00000023049	ENSPNYG00000023050	ENSPNYG00000023054	stip1 (ENSPNYG00000023064)	rps6ka4 (ENSPNYG00000023083)	FLRT1 (ENSPNYG00000023099)	zfpl1 (ENSPNYG00000023103)	rom1a (ENSPNYG00000023110)	frmd8 (ENSPNYG00000023113)	vps51 (ENSPNYG00000023125)	tm7sf2 (ENSPNYG00000023138)	CNIH2 (ENSPNYG00000023144)	slc8a4a (ENSPNYG00000023153)	ENSPNYG00000023160
Burton s mouthbrooder	MODERN SPECIES	406													ABR (ENSHBUG00000021009)	aspa (ENSHBUG00000021022)	ENSHBUG00000021038	zgc:85789 (ENSHBUG00000021075) #22	AKAP10 (ENSHBUG00000021148)	ENSHBUG00000021165	ENSHBUG00000021195	ENSHBUG00000021204	stip1 (ENSHBUG00000021371)	rps6ka4 (ENSHBUG00000021438)	FLRT1 (ENSHBUG00000021448)	zfpl1 (ENSHBUG00000021455)	rom1a (ENSHBUG00000021463)	frmd8 (ENSHBUG00000021476)	vps51 (ENSHBUG00000021512)	tm7sf2 (ENSHBUG00000021541)	CNIH2 (ENSHBUG00000021562)	slc8a4a (ENSHBUG00000021614)	ENSHBUG00000021630
Lyretail cichlid	MODERN SPECIES	354														ABR (ENSNBRG00000012214)	aspa (ENSNBRG00000012258)	zgc:85789 (ENSNBRG00000012267) #22	AKAP10 (ENSNBRG00000012293)	ENSNBRG00000012316	ENSNBRG00000012334	ENSNBRG00000012343	stip1 (ENSNBRG00000012363)	rps6ka4 (ENSNBRG00000012404)	FLRT1 (ENSNBRG00000012462)	zfpl1 (ENSNBRG00000012474)	rom1a (ENSNBRG00000012496)	frmd8 (ENSNBRG00000012506)	vps51 (ENSNBRG00000012550)	tm7sf2 (ENSNBRG00000012593)	cnih2 (ENSNBRG00000012627)	slc8a4a (ENSNBRG00000012641)	ENSNBRG00000012668
Nile tilapia	MODERN SPECIES	1	ENSONIG00000039692	akt2l (ENSONIG00000004786)	ENSONIG00000032303	ENSONIG00000004778	ENSONIG00000034958	vps11 (ENSONIG00000004772)	hyou1 (ENSONIG00000004764)	ENSONIG00000034010	ENSONIG00000004762	hspa8 (ENSONIG00000004759)	bsx (ENSONIG00000031607)	ENSONIG00000039897	ABR (ENSONIG00000001703)	aspa (ENSONIG00000001713)	ENSONIG00000032227	zgc:85789 (ENSONIG00000001715) #22	AKAP10 (ENSONIG00000001717)	ENSONIG00000031139	spata22 (ENSONIG00000032056)	stip1 (ENSONIG00000001725)	rps6ka4 (ENSONIG00000001731)	FLRT1 (ENSONIG00000020833)	zfpl1 (ENSONIG00000001738)	rom1a (ENSONIG00000001742)	frmd8 (ENSONIG00000001744)	vps51 (ENSONIG00000001751)	tm7sf2 (ENSONIG00000001754)	CNIH2 (ENSONIG00000001755)	slc8a4a (ENSONIG00000001757)	ENSONIG00000042112	gng3 (ENSONIG00000040306)
Midas cichlid	MODERN SPECIES	1216																zgc:85789 (ENSACIG00000015617) #22	AKAP10 (ENSACIG00000015588)	ENSACIG00000015571	ENSACIG00000015548	stip1 (ENSACIG00000015321)	rps6ka4 (ENSACIG00000015277)	FLRT1 (ENSACIG00000015271)	zfpl1 (ENSACIG00000015229)	rom1a (ENSACIG00000015205)	frmd8 (ENSACIG00000015185)	vps51 (ENSACIG00000015157)	tm7sf2 (ENSACIG00000015138)	cnih2 (ENSACIG00000015121)	slc8a4a (ENSACIG00000015102)	ENSACIG00000015093	gng3 (ENSACIG00000015032)
Atherinomorphae	ANCESTRAL SPECIES	14	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000162439	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000178716	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Cyprinodontiformes	ANCESTRAL SPECIES	11	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00940000163680	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000178716	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Aplocheiloidei	ANCESTRAL SPECIES	33	ENSGT00530000063811.A.a.a	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163680	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Mangrove rivulus	MODERN SPECIES	22	fam222ba (ENSKMAG00000012505)	trpv1 (ENSKMAG00000012465)	SHPK (ENSKMAG00000012437)	emc6 (ENSKMAG00000012426)	p2rx5 (ENSKMAG00000012391)	ENSKMAG00000012362	CENPV (ENSKMAG00000012340)	pigl (ENSKMAG00000012322)	ncor1 (ENSKMAG00000012284)	zswim7 (ENSKMAG00000012261)	adora2b (ENSKMAG00000012244)	SPECC1 (ENSKMAG00000012195)	TIMM22 (ENSKMAG00000012160)	ABR (ENSKMAG00000012034)	aspa (ENSKMAG00000011948)	zgc:85789 (ENSKMAG00000011912) #22	AKAP10 (ENSKMAG00000011848)	ENSKMAG00000011824	ENSKMAG00000011799	stip1 (ENSKMAG00000011763)	ENSKMAG00000011738	rps6ka4 (ENSKMAG00000011683)	FLRT1 (ENSKMAG00000011666)	zfpl1 (ENSKMAG00000011649)	rom1a (ENSKMAG00000011638)	frmd8 (ENSKMAG00000011619)	vps51 (ENSKMAG00000011579)	tm7sf2 (ENSKMAG00000011538)	cnih2 (ENSKMAG00000011506)	slc8a4a (ENSKMAG00000011464)	ENSKMAG00000011415
Turquoise killifish	MODERN SPECIES	1620	ENSNFUG00015006264	ENSNFUG00015006265	MYBBP1A (ENSNFUG00015006284)	TBL2 (ENSNFUG00015006342)	ENSNFUG00015006419	ENSNFUG00015006430	CENPV (ENSNFUG00015006440)	PIGL (ENSNFUG00015006450)	ncor1 (ENSNFUG00015006517)	ZSWIM7 (ENSNFUG00015006684)	adora2b (ENSNFUG00015006688)	SPECC1 (ENSNFUG00015006691)	TIMM22 (ENSNFUG00015006693)	ABR (ENSNFUG00015006838)	ASPA (ENSNFUG00015008772)	C24H11ORF54 (ENSNFUG00015008783) #22	AKAP10 (ENSNFUG00015008834)	TMEM211 (ENSNFUG00015009668)	ENSNFUG00015009686	STIP1 (ENSNFUG00015009770)	rps6ka4 (ENSNFUG00015010153)	FLRT1A (ENSNFUG00015011031)	ZFPL1 (ENSNFUG00015011038)	ENSNFUG00015011052	rom1a (ENSNFUG00015011067)	FRMD8 (ENSNFUG00015011102)	VPS51 (ENSNFUG00015011207)	TM7SF2 (ENSNFUG00015011498)	CNIH2 (ENSNFUG00015011538)	ENSNFUG00015011579	SLC8A4A (ENSNFUG00015011588)
Cyprinodontoidei	ANCESTRAL SPECIES	5	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000178716	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053
Poeciliinae	ANCESTRAL SPECIES	17	ENSGT00940000158512.b.k	ENSGT00940000158512.b.l	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163900	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d.j	ENSGT00940000164137.b	ENSGT00940000166053
Poecilia	ANCESTRAL SPECIES	7	ENSGT00940000158512.b.k	ENSGT00940000158512.b.l	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000163680	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d.j	ENSGT00940000164137.b	ENSGT00940000166053
NAME_6	ANCESTRAL SPECIES	16	ENSGT00940000158512.b.l	ENSGT01000000214434.E	ENSGT01020000230351.E.d	ENSGT00390000003917	ENSGT00940000157820.a.a	ENSGT00940000163355	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b.pb	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00980000203187	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000167701.b	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d.j	ENSGT00940000164137.b
Amazon molly	MODERN SPECIES	266	p2rx5 (ENSPFOG00000018649)	emc6 (ENSPFOG00000020539)	UBB (ENSPFOG00000018650)	ENSPFOG00000018651	ENSPFOG00000021668	CENPV (ENSPFOG00000018656)	pigl (ENSPFOG00000018665)	ncor1 (ENSPFOG00000018684)	zswim7 (ENSPFOG00000018718)	adora2b (ENSPFOG00000018720)	SPECC1 (ENSPFOG00000018727)	TIMM22 (ENSPFOG00000018761)	ABR (ENSPFOG00000018783)	ENSPFOG00000024646	aspa (ENSPFOG00000018835)	zgc:85789 (ENSPFOG00000018846) #22	AKAP10 (ENSPFOG00000018855)	ENSPFOG00000018865	ENSPFOG00000020540	ENSPFOG00000023352	stip1 (ENSPFOG00000018870)	rps6ka4 (ENSPFOG00000018888)	FLRT1 (ENSPFOG00000020541)	FLRT1 (ENSPFOG00000020542)	zfpl1 (ENSPFOG00000018926)	ENSPFOG00000018932	rom1a (ENSPFOG00000018935)	frmd8 (ENSPFOG00000018942)	vps51 (ENSPFOG00000018955)	ENSPFOG00000020543	tm7sf2 (ENSPFOG00000018968)
Sailfin molly	MODERN SPECIES	339									ENSPLAG00000022449	zswim7 (ENSPLAG00000022419)	adora2b (ENSPLAG00000000550)	SPECC1 (ENSPLAG00000022367)	TIMM22 (ENSPLAG00000022218)	ABR (ENSPLAG00000022196)	aspa (ENSPLAG00000022114)	zgc:85789 (ENSPLAG00000022089) #22	AKAP10 (ENSPLAG00000022055)
Guppy	MODERN SPECIES	444	trpv1 (ENSPREG00000006851)	SHPK (ENSPREG00000006826)	emc6 (ENSPREG00000006818)	p2rx5 (ENSPREG00000006798)	ENSPREG00000006738	ENSPREG00000006655	CENPV (ENSPREG00000006627)	pigl (ENSPREG00000006612)	ncor1 (ENSPREG00000006239)	zswim7 (ENSPREG00000006166)	adora2b (ENSPREG00000006152)	SPECC1 (ENSPREG00000006105)	TIMM22 (ENSPREG00000006071)	ABR (ENSPREG00000005925)	aspa (ENSPREG00000005891)	zgc:85789 (ENSPREG00000005863) #22	AKAP10 (ENSPREG00000005753)	ENSPREG00000005723	ENSPREG00000005711	stip1 (ENSPREG00000005665)	rps6ka4 (ENSPREG00000005629)	FLRT1 (ENSPREG00000005614)	ENSPREG00000005605	zfpl1 (ENSPREG00000005577)	rom1a (ENSPREG00000005543)	frmd8 (ENSPREG00000005521)	vps51 (ENSPREG00000005491)	tm7sf2 (ENSPREG00000005429)	CNIH2 (ENSPREG00000005398)	ENSPREG00000005376	ttc5 (ENSPREG00000005336)
Platyfish	MODERN SPECIES	2	SHPK (ENSXMAG00000005428)	emc6 (ENSXMAG00000020012)	p2rx5 (ENSXMAG00000012552)	ENSXMAG00000026304	CENPV (ENSXMAG00000005423)	pigl (ENSXMAG00000005418)	ncor1 (ENSXMAG00000005388)	zswim7 (ENSXMAG00000005379)	adora2b (ENSXMAG00000023135)	SPECC1 (ENSXMAG00000005351)	TIMM22 (ENSXMAG00000024282)	TIMM22 (ENSXMAG00000023062)	ABR (ENSXMAG00000027040)	aspa (ENSXMAG00000005326)	TIMM22 (ENSXMAG00000022182)	zgc:85789 (ENSXMAG00000005320) #22	AKAP10 (ENSXMAG00000005302)	ENSXMAG00000023568	stip1 (ENSXMAG00000005277)	rps6ka4 (ENSXMAG00000005217)	FLRT1 (ENSXMAG00000020010)	zfpl1 (ENSXMAG00000014326)	rom1a (ENSXMAG00000005204)	frmd8 (ENSXMAG00000005188)	vps51 (ENSXMAG00000005163)	tm7sf2 (ENSXMAG00000026147)	CNIH2 (ENSXMAG00000028619)	slc8a4a (ENSXMAG00000005116)	ENSXMAG00000021672	banf1 (ENSXMAG00000005109)	gng3 (ENSXMAG00000024208)
NAME_4	ANCESTRAL SPECIES	5	ENSGT00940000158512.b	ENSGT01000000214434.E	ENSGT00390000003917	ENSGT01020000230351.E.d	ENSGT00940000157820.a.b	ENSGT00390000003183	ENSGT00390000018434	ENSGT00940000155093.b	ENSGT00390000017523	ENSGT01030000234555.a.a.a.c.a	ENSGT00940000153592.B.a	ENSGT00390000016067	ENSGT00940000178716	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Mummichog	MODERN SPECIES	2285					ENSFHEG00000000192	CENPV (ENSFHEG00000007337)	pigl (ENSFHEG00000007323)	ENSFHEG00000007280	ncor1 (ENSFHEG00000007237)	zswim7 (ENSFHEG00000006491)	adora2b (ENSFHEG00000006486)	SPECC1 (ENSFHEG00000006466)	TIMM22 (ENSFHEG00000006393)	ABR (ENSFHEG00000006363)	aspa (ENSFHEG00000006153)	zgc:85789 (ENSFHEG00000006125) #22	AKAP10 (ENSFHEG00000006096)	ENSFHEG00000000694	ENSFHEG00000006064	stip1 (ENSFHEG00000006057)	ENSFHEG00000006018	FLRT1 (ENSFHEG00000006000)	zfpl1 (ENSFHEG00000005995)	rom1a (ENSFHEG00000000164)	frmd8 (ENSFHEG00000005931)	vps51 (ENSFHEG00000005902)	tm7sf2 (ENSFHEG00000005841)	cnih2 (ENSFHEG00000005822)	slc8a4a (ENSFHEG00000005798)	ENSFHEG00000005780	gng3 (ENSFHEG00000005766)
Sheepshead minnow	MODERN SPECIES	462	emc6 (ENSCVAG00000003828)	p2rx5 (ENSCVAG00000003839)	ENSCVAG00000003853	ENSCVAG00000003861	CENPV (ENSCVAG00000003874)	pigl (ENSCVAG00000003921)	ENSCVAG00000003935	ncor1 (ENSCVAG00000004019)	zswim7 (ENSCVAG00000004030)	adora2b (ENSCVAG00000004036)	SPECC1 (ENSCVAG00000004061)	TIMM22 (ENSCVAG00000004080)	ENSCVAG00000004090	ABR (ENSCVAG00000004212)	aspa (ENSCVAG00000004230)	zgc:85789 (ENSCVAG00000004253) #22	ENSCVAG00000004265	ENSCVAG00000004274	sdf2 (ENSCVAG00000004290)	ENSCVAG00000004304	nf2b (ENSCVAG00000004327)	mettl27 (ENSCVAG00000004341)
Oryzias	ANCESTRAL SPECIES	14	ENSGT00940000157382	ENSGT00390000010822	ENSGT00940000167280	ENSGT00940000157044	ENSGT00390000001752	ENSGT00940000155690.b.a	ENSGT00940000158976	ENSGT00530000063474.B.e.b	ENSGT00940000154006.b	ENSGT00510000048674	ENSGT00390000018559	ENSGT00950000183203.d.d.b	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Oryzias_a	ANCESTRAL SPECIES	2	ENSGT00940000157382	ENSGT00390000010822	ENSGT00940000167280	ENSGT00940000157044	ENSGT00390000001752	ENSGT00940000155690.b.a	ENSGT00940000158976	ENSGT00530000063474.B.e.b	ENSGT00940000154006.b	ENSGT00510000048674	ENSGT00390000018559	ENSGT00950000183203.d.d.b	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Chinese medaka	MODERN SPECIES	1129	ggnbp2 (ENSOSIG00000019178)	pigw (ENSOSIG00000019173)	vkorc1l1 (ENSOSIG00000019163)	GUSB (ENSOSIG00000018973)	ca4a (ENSOSIG00000018948)	MTMR4 (ENSOSIG00000016007)	hpda (ENSOSIG00000015964)	ENSOSIG00000015959	ENSOSIG00000015954	supt4h1 (ENSOSIG00000015952)	ENSOSIG00000015949	ENSOSIG00000015945	TIMM22 (ENSOSIG00000015938)	ABR (ENSOSIG00000010068)	aspa (ENSOSIG00000010036)	zgc:85789 (ENSOSIG00000010035) #22	AKAP10 (ENSOSIG00000010024)	ENSOSIG00000010017
Japanese Medaka HdrR	MODERN SPECIES	5	MYO19 (ENSORLG00000011314)	znhit3 (ENSORLG00000027106)	nupr1a (ENSORLG00000022138)	vkorc1l1 (ENSORLG00000028986)	GUSB (ENSORLG00000011274)	ca4a (ENSORLG00000011256)	MTMR4 (ENSORLG00000011238)	hpda (ENSORLG00000011134)	ENSORLG00000011102	ENSORLG00000023921	supt4h1 (ENSORLG00000011097)	ENSORLG00000011077	TIMM22 (ENSORLG00000011052)	ABR (ENSORLG00000011038)	aspa (ENSORLG00000010962)	zgc:85789 (ENSORLG00000010933) #22	AKAP10 (ENSORLG00000010902)	ENSORLG00000030139	ENSORLG00000029502	ENSORLG00000025822	stip1 (ENSORLG00000010852)	rps6ka4 (ENSORLG00000029603)	FLRT1 (ENSORLG00000010796)	zfpl1 (ENSORLG00000010791)	rom1a (ENSORLG00000010774)	frmd8 (ENSORLG00000010763)	ENSORLG00000024229	vps51 (ENSORLG00000010722)	tm7sf2 (ENSORLG00000010698)	CNIH2 (ENSORLG00000010687)	slc8a4a (ENSORLG00000010660)
Oryzias_b	ANCESTRAL SPECIES	51		ENSGT00390000010822	ENSGT00940000167280	ENSGT00940000157044	ENSGT00390000001752	ENSGT00940000155690.b.a	ENSGT00940000158976	ENSGT00530000063474.B.e.b.a	ENSGT00940000154006.b	ENSGT00510000048674	ENSGT00390000018559	ENSGT00950000183203.d.d.b	ENSGT00390000016067	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00390000017214 #22	ENSGT00390000015077	ENSGT00990000203589.a.a	ENSGT00390000018151	ENSGT00940000154911	ENSGT00940000161083	ENSGT00940000159375.c.a	ENSGT00390000009753	ENSGT00940000159921.c	ENSGT00530000063721.B	ENSGT00390000001738	ENSGT00390000000417.a.a.b.a.a	ENSGT00950000182834.A.a.b.d	ENSGT00940000164137.b	ENSGT00940000166053	ENSGT01100000263497.B
Indian medaka	MODERN SPECIES	4	nupr1a (ENSOMEG00000009409)	vkorc1l1 (ENSOMEG00000009394)	GUSB (ENSOMEG00000009376)	ca4a (ENSOMEG00000009340)	MTMR4 (ENSOMEG00000009297)	ENSOMEG00000009165	ENSOMEG00000009139	ENSOMEG00000009114	supt4h1 (ENSOMEG00000009103)	ENSOMEG00000009085	ENSOMEG00000009069	ENSOMEG00000009049	TIMM22 (ENSOMEG00000009024)	ABR (ENSOMEG00000008951)	aspa (ENSOMEG00000008719)	zgc:85789 (ENSOMEG00000000802) #22	AKAP10 (ENSOMEG00000008603)	ENSOMEG00000008545	ENSOMEG00000008519	stip1 (ENSOMEG00000008482)	rps6ka4 (ENSOMEG00000008409)	ENSOMEG00000008342	FLRT1 (ENSOMEG00000000203)	zfpl1 (ENSOMEG00000008319)	rom1a (ENSOMEG00000008296)	frmd8 (ENSOMEG00000008267)	vps51 (ENSOMEG00000008229)	tm7sf2 (ENSOMEG00000008189)	CNIH2 (ENSOMEG00000008172)	slc8a4a (ENSOMEG00000008136)	ENSOMEG00000008110
Javanese ricefish	MODERN SPECIES	5	hspa8 (ENSOJAG00000018765)	ei24 (ENSOJAG00000018985)	stt3a (ENSOJAG00000019081)	thap12a (ENSOJAG00000019565)	ENSOJAG00000019573	ENSOJAG00000019596	c1qbp (ENSOJAG00000019616)	supt4h1 (ENSOJAG00000019624)	ENSOJAG00000019655	ENSOJAG00000019671	ENSOJAG00000019683	TIMM22 (ENSOJAG00000005990)	ABR (ENSOJAG00000006346)	ENSOJAG00000008701	aspa (ENSOJAG00000008728)	zgc:85789 (ENSOJAG00000008743) #22	AKAP10 (ENSOJAG00000008891)	ENSOJAG00000009477	ENSOJAG00000009510	stip1 (ENSOJAG00000009604)	rps6ka4 (ENSOJAG00000010650)	FLRT1 (ENSOJAG00000011610)	zfpl1 (ENSOJAG00000011616)	rom1a (ENSOJAG00000011632)	frmd8 (ENSOJAG00000011646)	vps51 (ENSOJAG00000011728)	tm7sf2 (ENSOJAG00000012089)	CNIH2 (ENSOJAG00000012105)	slc8a4a (ENSOJAG00000012145)	ENSOJAG00000012207	banf1 (ENSOJAG00000012223)
Pinecone sodierfish	MODERN SPECIES	5	ENSMMDG00005019125	ENSMMDG00005019123	supt4h1 (ENSMMDG00005019113)	ENSMMDG00005018895	ENSMMDG00005018869	YWHAG (ENSMMDG00005018868)	hspb1 (ENSMMDG00005018865)	ENSMMDG00005018862	ENSMMDG00005018853	c1qbp (ENSMMDG00005018846)	dhx33 (ENSMMDG00005018843)	TIMM22 (ENSMMDG00005018841)	ENSMMDG00005018840	ABR (ENSMMDG00005015752)	aspa (ENSMMDG00005015653)	zgc:85789 (ENSMMDG00005015648) #22	AKAP10 (ENSMMDG00005014713)	ENSMMDG00005014703	ENSMMDG00005014702	cltca (ENSMMDG00005013120)	ptrh2 (ENSMMDG00005013065)	VMP1 (ENSMMDG00005013062)	RPS6KB1 (ENSMMDG00005010924)	rnft1 (ENSMMDG00005010907)	med13a (ENSMMDG00005010425)	ints2 (ENSMMDG00005010370)	AUTS2 (ENSMMDG00005010155)	cxadr (ENSMMDG00005010147)	btg3 (ENSMMDG00005010144)	zgc:110006 (ENSMMDG00005010143)	ripk4 (ENSMMDG00005010140)
Cod	MODERN SPECIES	20	ZZEF1 (ENSGMOG00000012326)	cyb5d2 (ENSGMOG00000012320)	ankfy1 (ENSGMOG00000012308)	ube2g1a (ENSGMOG00000012306)	ubb (ENSGMOG00000023766)	CENPV (ENSGMOG00000010648)	pigl (ENSGMOG00000010655)	ncor1 (ENSGMOG00000022749)	zswim7 (ENSGMOG00000010701)	adora2b (ENSGMOG00000010712)	ENSGMOG00000034697	ENSGMOG00000010736	ENSGMOG00000010744	ENSGMOG00000030116	ENSGMOG00000010763	zgc:85789 (ENSGMOG00000010771) #22	ENSGMOG00000010783	ENSGMOG00000035370	ENSGMOG00000025228	cltca (ENSGMOG00000012290)	ptrh2 (ENSGMOG00000020589)	ENSGMOG00000012274	ENSGMOG00000012269	rnft1 (ENSGMOG00000012265)	med13a (ENSGMOG00000012253)	ints2 (ENSGMOG00000012241)	ENSGMOG00000036889	ENSGMOG00000023510	ENSGMOG00000028475	cxadr (ENSGMOG00000012230)	ENSGMOG00000012227
Spotted gar	MODERN SPECIES	661	aspa (ENSLOCG00000003642)	ENSLOCG00000003659	ENSLOCG00000003673	AKAP10 (ENSLOCG00000003685)	ints2 (ENSLOCG00000003709)	med13b (ENSLOCG00000003727)	ENSLOCG00000003767	rnft1 (ENSLOCG00000003795)	rps6kb1b (ENSLOCG00000003823)	tubd1 (ENSLOCG00000003847)	vmp1 (ENSLOCG00000003867)	ptrh2 (ENSLOCG00000017426)	cltca (ENSLOCG00000003892)	DHX40 (ENSLOCG00000003916)	ENSLOCG00000003933	zgc:85789 (ENSLOCG00000003948) #22	ENSLOCG00000003962	AUTS2 (ENSLOCG00000003979)	GALNT17 (ENSLOCG00000003993)	CALN1 (ENSLOCG00000004017)	tyw1 (ENSLOCG00000004035)	sbds (ENSLOCG00000004073)	nf2b (ENSLOCG00000004088)	mrps17 (ENSLOCG00000004118)	NIPSNAP2 (ENSLOCG00000004134)	psph (ENSLOCG00000004152)	cct6a (ENSLOCG00000004174)	sumf2 (ENSLOCG00000004200)	phkg1b (ENSLOCG00000004210)	chchd2 (ENSLOCG00000004252)	ENSLOCG00000004273
Reedfish	MODERN SPECIES	16	ABR (ENSECRG00000009333)	aspa (ENSECRG00000009575)	ENSECRG00000009586	ENSECRG00000009599	AKAP10 (ENSECRG00000009614)	ints2 (ENSECRG00000009696)	ENSECRG00000009817	rnft1 (ENSECRG00000009822)	rps6kb1b (ENSECRG00000009842)	tubd1 (ENSECRG00000009859)	vmp1 (ENSECRG00000009872)	ptrh2 (ENSECRG00000009891)	ENSECRG00000009941	DHX40 (ENSECRG00000010026)	ENSECRG00000010053 #21	zgc:85789 (ENSECRG00000010068) #22	ENSECRG00000010079	AUTS2 (ENSECRG00000010102)	GALNT17 (ENSECRG00000010128)	CALN1 (ENSECRG00000010148)	tyw1 (ENSECRG00000010163)	sbds (ENSECRG00000010179)	nf2b (ENSECRG00000010195)	mrps17 (ENSECRG00000010225)	NIPSNAP2 (ENSECRG00000010247)	psph (ENSECRG00000010282)	cct6a (ENSECRG00000010310)	sumf2 (ENSECRG00000010336)	phkg1b (ENSECRG00000010342)	chchd2 (ENSECRG00000010353)	ENSECRG00000010361
Elephant shark	MODERN SPECIES	1532	ggnbp2 (ENSCMIG00000017777)	pigw (ENSCMIG00000017761)	MYO19 (ENSCMIG00000017757)	ENSCMIG00000017754	ENSCMIG00000017752	ENSCMIG00000017746	asl (ENSCMIG00000017533)	ENSCMIG00000017426	GUSB (ENSCMIG00000017405)	vkorc1l1 (ENSCMIG00000017395)	castor2 (ENSCMIG00000017375)	ENSCMIG00000017361	ENSCMIG00000017359	ENSCMIG00000017357	ENSCMIG00000017321	zgc:85789 (ENSCMIG00000017286) #22	ENSCMIG00000017247	MMP28 (ENSCMIG00000017226)	ENSCMIG00000017225	ENSCMIG00000017222	RASL10B (ENSCMIG00000017221)	ap2b1 (ENSCMIG00000017082)	pex12 (ENSCMIG00000017035)	ENSCMIG00000017032	ENSCMIG00000017030	ENSCMIG00000017027	ywhag1 (ENSCMIG00000017025)	ENSCMIG00000017016	hspb1 (ENSCMIG00000017013)	ENSCMIG00000017011	unc93b1 (ENSCMIG00000016987)