Eutheria	ANCESTRAL SPECIES	19	ENSGT00940000156041	ENSGT00390000005105	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000163206.a	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00390000005105	ENSGT00940000154688.b	ENSGT00990000204193	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000163206.a	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00390000005105	ENSGT00940000154688.b	ENSGT00990000204193	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000163206.a	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413
Primates	ANCESTRAL SPECIES	28											ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413
Haplorrhini	ANCESTRAL SPECIES	35											ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413	ENSGT00390000009456 #35
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000160464	ENSGT00390000000719	ENSGT00390000007227.b	ENSGT00390000008152.B.a	ENSGT00940000162643	ENSGT01050000244941.B.c	ENSGT00950000183110.a	ENSGT00550000075064	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413	ENSGT00390000009456 #35
Platyrrhini	ANCESTRAL SPECIES	25	ENSGT00940000160464	ENSGT00390000000719	ENSGT00390000007227.b	ENSGT00390000008152.B.a	ENSGT00940000162643	ENSGT01050000244941.B.c	ENSGT00950000183110.a	ENSGT00550000075064	ENSGT00950000182755.b.a.a.b.a.b.a.a.g.a	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00390000001014.n #17	ENSGT00940000161356 #18	ENSGT00390000010067.c #19	ENSGT00940000160728 #20	ENSGT00390000009077.hb #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000155097.kb	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35
Cebidae	ANCESTRAL SPECIES	8	ENSGT00390000000719	ENSGT00390000007227.b	ENSGT00390000008152.B.a	ENSGT00940000162643	ENSGT01050000244941.B.c	ENSGT00950000183110.a	ENSGT00550000075064	ENSGT00950000182755.b.a.a.b.a.b.a.a.g.a	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00940000154251.A.a.b ##10	ENSGT00390000001014.n #17	ENSGT00940000161356 #18	ENSGT00390000010067.c #19	ENSGT00940000160728 #20	ENSGT00390000009077.hb #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36
Marmoset	MODERN SPECIES	14	ENSCJAG00000072051 #7	ENSCJAG00000083733 #8	ENSCJAG00000054352 #9	ZNF681 (ENSCJAG00000011995) #10	ENSCJAG00000082182 #11	ZNF254 (ENSCJAG00000015228) #12	ENSCJAG00000072073 #13	ENSCJAG00000072387 #14	ENSCJAG00000011613 #15	ENSCJAG00000085320 #16	ENSCJAG00000001887 #17	VSTM2B (ENSCJAG00000001884) #18	POP4 (ENSCJAG00000046750) #19	PLEKHF1 (ENSCJAG00000001871) #20	C19orf12 (ENSCJAG00000086068) #21	CCNE1 (ENSCJAG00000001857) #22	URI1 (ENSCJAG00000001823) #23	ZNF536 (ENSCJAG00000018365) #24	TSHZ3 (ENSCJAG00000018374) #25	ZNF507 (ENSCJAG00000018378) #26	DPY19L3 (ENSCJAG00000018385) #27	ENSCJAG00000018410 #28	ANKRD27 (ENSCJAG00000018416) #29	RGS9BP (ENSCJAG00000075946) #30	NUDT19 (ENSCJAG00000018441) #31	TDRD12 (ENSCJAG00000000763) #32	SLC7A9 (ENSCJAG00000000755) #33	CEP89 (ENSCJAG00000000731) #34	FAAP24 (ENSCJAG00000048468) #35	RHPN2 (ENSCJAG00000000708) #36	GPATCH1 (ENSCJAG00000000684) #37
Cebidae_a	ANCESTRAL SPECIES	35											ENSGT00390000001014.n #17	ENSGT00940000161356 #18	ENSGT00390000010067.c #19	ENSGT00940000160728 #20	ENSGT00390000009077.hb #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Capuchin	MODERN SPECIES	261											UQCRFS1 (ENSCCAG00000026746) #17	VSTM2B (ENSCCAG00000028420) #18	ENSCCAG00000020285 #19	PLEKHF1 (ENSCCAG00000019193) #20	ENSCCAG00000024988 #21	CCNE1 (ENSCCAG00000020086) #22	URI1 (ENSCCAG00000019670) #23	ZNF536 (ENSCCAG00000030471) #24	TSHZ3 (ENSCCAG00000028090) #25	ENSCCAG00000029568	ZNF507 (ENSCCAG00000032775) #26	ENSCCAG00000035343	HS2ST1 (ENSCCAG00000026104)	SELENOF (ENSCCAG00000033446)	ENSCCAG00000031456	ENSCCAG00000000976	SH3GLB1 (ENSCCAG00000029842)	ENSCCAG00000035676	CLCA4 (ENSCCAG00000027130)	CLCA1 (ENSCCAG00000032498)	CLCA2 (ENSCCAG00000022983)
Bolivian squirrel monkey	MODERN SPECIES	134											UQCRFS1 (ENSSBOG00000031980) ##17	VSTM2B (ENSSBOG00000000764) #18	POP4 (ENSSBOG00000032445) #19	PLEKHF1 (ENSSBOG00000020039) #20	ENSSBOG00000025647 #21	CCNE1 (ENSSBOG00000028300) #22	URI1 (ENSSBOG00000026899) #23	ZNF536 (ENSSBOG00000030032) #24	TSHZ3 (ENSSBOG00000026781) #25	ZNF507 (ENSSBOG00000029395) #26	DPY19L3 (ENSSBOG00000016884) #27	ENSSBOG00000031965 #28	ANKRD27 (ENSSBOG00000003371) #29	TDRD12 (ENSSBOG00000034916) #32	SLC7A9 (ENSSBOG00000026844) #33	CEP89 (ENSSBOG00000020185) #34	ENSSBOG00000032597 #35	RHPN2 (ENSSBOG00000019588) #36	ENSSBOG00000015947	GPATCH1 (ENSSBOG00000034650) #37	WDR88 (ENSSBOG00000025893)
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	1081							ENSANAG00000029579 #12	ENSANAG00000019793	ENSANAG00000021197	ENSANAG00000024673 ##12	ENSANAG00000026070 #17	VSTM2B (ENSANAG00000011934) #18	POP4 (ENSANAG00000020295) #19	PLEKHF1 (ENSANAG00000031611) #20	ENSANAG00000020400 #21	ENSANAG00000020114 #22	URI1 (ENSANAG00000030437) #23	ENSANAG00000022926	ZNF536 (ENSANAG00000022858) #24	TSHZ3 (ENSANAG00000003355) #25	ZNF507 (ENSANAG00000022070) #26	DPY19L3 (ENSANAG00000019965) #27	ENSANAG00000030236 #28	ANKRD27 (ENSANAG00000035787) #29	RGS9BP (ENSANAG00000034601) #30	NUDT19 (ENSANAG00000035514) #31	TDRD12 (ENSANAG00000023166) #32	SLC7A9 (ENSANAG00000023617) #33	CEP89 (ENSANAG00000020648) #34	ENSANAG00000025099 #35	RHPN2 (ENSANAG00000035594) #36
Mas night monkey	MODERN SPECIES	775	TBX15 (ENSANAG00000031356)	WARS2 (ENSANAG00000023161)	HAO2 (ENSANAG00000027767)	ENSANAG00000024099	ENSANAG00000027651	ZNF697 (ENSANAG00000035327)	PHGDH (ENSANAG00000020037)	HMGCS2 (ENSANAG00000028816)	REG4 (ENSANAG00000034580)	ENSANAG00000029050	ENSANAG00000029304	NOTCH2 (ENSANAG00000020885)	SEC22B (ENSANAG00000022757)	ENSANAG00000024321	PDE4DIP (ENSANAG00000031498)	ENSANAG00000028435 #22
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000154251.A.a.b ##10	ENSGT00940000165698.B	ENSGT00940000163381.a	ENSGT00940000153236.b.b.b.a.a.b.a.a ##12	ENSGT00940000154251.A.b.b.a.b.b #10	ENSGT00940000153236.b.a.a.b.b.a.b ##12	ENSGT00940000161942.a.a.a.a.b	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.a ##12	ENSGT00940000154940.qb	ENSGT00940000154453.b.a.a.a.b	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413	ENSGT00390000009456 #35
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000163381.a.e.a	ENSGT00940000163381.a.e.b	ENSGT00940000153236.b.b.b.b.b ##12	ENSGT01100000263507.E.b.b.c.a	ENSGT00940000153236.b.b.b.a.a.b.a.a ##12	ENSGT00940000154251.A.b.b.a.b.b #10	ENSGT00940000153236.b.a.a.b.b.a.b ##12	ENSGT00940000153236.b.a.a.b.b.b #12	ENSGT00940000159345.o	ENSGT00940000154453.b.a.a.a.b	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413	ENSGT00390000009456 #35
Hominidae	ANCESTRAL SPECIES		ENSGT00940000165698.B	ENSGT00940000163381.a.e.a	ENSGT00940000163381.a.d	ENSGT00940000153236.b.b.b.b.b ##12	ENSGT01100000263507.E.b.b.c.a	ENSGT00940000154251.A.b.b.a.b.b #10	ENSGT00940000153236.b.a.a.b.b.a.b ##12	ENSGT00940000153236.b.a.a.b.b.b #12	ENSGT00940000159345.o	ENSGT00940000154453.b.a.a.a.b	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000163744.b ##9	ENSGT00940000165698.A	ENSGT00940000153236.b.b.b.b.a ##12	ENSGT00940000163381.a.e.a	ENSGT00940000163381.a.e.b	ENSGT00940000153236.b.b.b.b.b ##12	ENSGT00940000154251.A.b.b.a.b.b #10	ENSGT00940000153236.b.a.a.b.b.a.b ##12	ENSGT00940000153236.b.a.a.b.b.b #12	ENSGT00940000159345.o	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000155097.w.a	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000163744.b ##9	ENSGT00940000165698.A	ENSGT00940000153236.b.b.b.b.a ##12	ENSGT00940000163381.a.e.a	ENSGT00940000163381.a.e.b	ENSGT00940000153236.b.b.b.b.b ##12	ENSGT00940000154251.A.b.b.a.b.b #10	ENSGT00940000153236.b.a.a.b.b.a.b ##12	ENSGT00940000153236.b.a.a.b.b.b #12	ENSGT00940000159345.o	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000155097.w.a	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35
Pan	ANCESTRAL SPECIES	32	ENSGT00940000165698.A	ENSGT00940000153236.b.b.b.b.a ##12	ENSGT00940000163381.a.e.a	ENSGT00390000008294.e.a.q.a	ENSGT00940000163381.a.e.b	ENSGT00940000153236.b.b.b.b.b ##12	ENSGT00940000154251.A.b.b.a.b.b #10	ENSGT00940000153236.b.a.a.b.b.a.b ##12	ENSGT00940000153236.b.a.a.b.b.b #12	ENSGT00940000159345.o	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362.m #23	ENSGT00940000155097.w.a	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35
Chimpanzee	MODERN SPECIES	10	ENSPTRG00000043133 ##12	ENSPTRG00000044612	ENSPTRG00000043231	ENSPTRG00000043755 ##12	ZNF675 (ENSPTRG00000022567)	ENSPTRG00000048149	ZNF681 (ENSPTRG00000043365) #10	ENSPTRG00000046645 ##12	ZNF254 (ENSPTRG00000019222) #12	ENSPTRG00000049554	UQCRFS1 (ENSPTRG00000010777) #17	VSTM2B (ENSPTRG00000010778) #18	POP4 (ENSPTRG00000010779) #19	PLEKHF1 (ENSPTRG00000010780) #20	C19H19orf12 (ENSPTRG00000010781) #21	CCNE1 (ENSPTRG00000010782) #22	URI1 (ENSPTRG00000010784) #23	ENSPTRG00000050716	ENSPTRG00000052821	ZNF536 (ENSPTRG00000010786) #24	TSHZ3 (ENSPTRG00000010788) #25	ENSPTRG00000048388	ZNF507 (ENSPTRG00000010789) #26	DPY19L3 (ENSPTRG00000010790) #27	PDCD5 (ENSPTRG00000010791) #28	ANKRD27 (ENSPTRG00000010792) #29	RGS9BP (ENSPTRG00000047454) #30	NUDT19 (ENSPTRG00000034496) #31	TDRD12 (ENSPTRG00000010795) #32	SLC7A9 (ENSPTRG00000010796) #33	CEP89 (ENSPTRG00000010797) #34
Bonobo	MODERN SPECIES	10	ENSPPAG00000035192	ENSPPAG00000035579	ENSPPAG00000036131	ENSPPAG00000041623 ##12	ENSPPAG00000043194 ##12	ENSPPAG00000025873	ZNF681 (ENSPPAG00000029602) #10	ZNF726 (ENSPPAG00000038380) ##12	ENSPPAG00000030126	ENSPPAG00000042511	UQCRFS1 (ENSPPAG00000029945) #17	VSTM2B (ENSPPAG00000031848) #18	POP4 (ENSPPAG00000040372) #19	ENSPPAG00000030231 #20	C19orf12 (ENSPPAG00000029958) #21	CCNE1 (ENSPPAG00000039579) #22	ENSPPAG00000032180 #23	ENSPPAG00000037943	ZNF536 (ENSPPAG00000034794) #24	TSHZ3 (ENSPPAG00000036336) #25	ZNF507 (ENSPPAG00000042851) #26	DPY19L3 (ENSPPAG00000028384) #27	ENSPPAG00000042320 #28	ANKRD27 (ENSPPAG00000035637) #29	RGS9BP (ENSPPAG00000013767) #30	ENSPPAG00000034507 #31	TDRD12 (ENSPPAG00000042284) #32	SLC7A9 (ENSPPAG00000040321) #33	CEP89 (ENSPPAG00000030028) #34	FAAP24 (ENSPPAG00000031426) #35	RHPN2 (ENSPPAG00000039976) #36
Human	MODERN SPECIES	10	ZNF728 (ENSG00000269067) ##12	ZNF730 (ENSG00000183850)	ZNF724 (ENSG00000196081) ##10	ENSG00000283201	ZNF91 (ENSG00000167232)	ZNF675 (ENSG00000197372)	ZNF681 (ENSG00000196172) #10	RPSA2 (ENSG00000288920)	ZNF726 (ENSG00000213967) ##12	ZNF254 (ENSG00000213096) #12	UQCRFS1 (ENSG00000169021) #17	VSTM2B (ENSG00000187135) #18	POP4 (ENSG00000105171) #19	PLEKHF1 (ENSG00000166289) #20	C19orf12 (ENSG00000131943) #21	CCNE1 (ENSG00000105173) #22	URI1 (ENSG00000105176) #23	ZNF536 (ENSG00000198597) #24	TSHZ3 (ENSG00000121297) #25	ZNF507 (ENSG00000168813) #26	DPY19L3 (ENSG00000178904) #27	PDCD5 (ENSG00000105185) #28	ANKRD27 (ENSG00000105186) #29	RGS9BP (ENSG00000186326) #30	NUDT19 (ENSG00000213965) #31	TDRD12 (ENSG00000173809) #32	SLC7A9 (ENSG00000021488) #33	CEP89 (ENSG00000121289) #34	FAAP24 (ENSG00000131944) #35	RHPN2 (ENSG00000131941) #36	GPATCH1 (ENSG00000076650) #37
Gorilla	MODERN SPECIES	10	ENSGGOG00000040305	ZNF728 (ENSGGOG00000043072) ##12	ENSGGOG00000006443	ENSGGOG00000026936	ZNF724 (ENSGGOG00000041632) ##10	ENSGGOG00000040519	ENSGGOG00000036879	ZNF681 (ENSGGOG00000036199) #10	ZNF726 (ENSGGOG00000038878) ##12	ZNF254 (ENSGGOG00000041266) #12	ENSGGOG00000025826	UQCRFS1 (ENSGGOG00000012978) #17	VSTM2B (ENSGGOG00000009691) #18	PLEKHF1 (ENSGGOG00000001698) #20	C19orf12 (ENSGGOG00000014142) #21	CCNE1 (ENSGGOG00000008452) #22	ENSGGOG00000037265	URI1 (ENSGGOG00000005886) #23	ENSGGOG00000025255	ZNF536 (ENSGGOG00000013640) #24	TSHZ3 (ENSGGOG00000003676) #25	ENSGGOG00000041898	ENSGGOG00000043441	ZNF507 (ENSGGOG00000010501) #26	DPY19L3 (ENSGGOG00000009160) #27	ENSGGOG00000006169 #28	ANKRD27 (ENSGGOG00000008596) #29	RGS9BP (ENSGGOG00000043355) #30	NUDT19 (ENSGGOG00000007785) #31	TDRD12 (ENSGGOG00000011938) #32	SLC7A9 (ENSGGOG00000011960) #33
Orangutan	MODERN SPECIES	10	ENSPPYG00000032804	ZNF492 (ENSPPYG00000039404) ##12	ZNF99 (ENSPPYG00000009789)	ENSPPYG00000029611	ZNF728 (ENSPPYG00000017535) ##12	ENSPPYG00000009794	ENSPPYG00000009788 ##12	ENSPPYG00000030360	ENSPPYG00000030635	ZNF681 (ENSPPYG00000038706) #10	ENSPPYG00000009802	UQCRFS1 (ENSPPYG00000038537) #17	VSTM2B (ENSPPYG00000010594) #18	POP4 (ENSPPYG00000009805) #19	PLEKHF1 (ENSPPYG00000009806) #20	CCNE1 (ENSPPYG00000009808) #22	ENSPPYG00000009810 #23	ZNF536 (ENSPPYG00000009811) #24	ENSPPYG00000030609	ENSPPYG00000031432	ZNF507 (ENSPPYG00000010581) #26	DPY19L3 (ENSPPYG00000009816) #27	PDCD5 (ENSPPYG00000009817) #28	ANKRD27 (ENSPPYG00000009818) #29	RGS9BP (ENSPPYG00000009819) #30	NUDT19 (ENSPPYG00000035150) #31	TDRD12 (ENSPPYG00000009821) #32	SLC7A9 (ENSPPYG00000009822) #33	CEP89 (ENSPPYG00000032385) #34	FAAP24 (ENSPPYG00000033989) #35	RHPN2 (ENSPPYG00000009823) #36
Gibbon	MODERN SPECIES		ENSNLEG00000036141	ZNF728 (ENSNLEG00000008927) ##12	ENSNLEG00000008916	ENSNLEG00000014075 ##12	ENSNLEG00000034498	ENSNLEG00000030674 ##12	ZNF681 (ENSNLEG00000026595) #10	ZNF726 (ENSNLEG00000028061) ##12	ZNF254 (ENSNLEG00000034962) #12	ENSNLEG00000030634	UQCRFS1 (ENSNLEG00000007588) #17	VSTM2B (ENSNLEG00000007593) #18	ENSNLEG00000028526	PLEKHF1 (ENSNLEG00000034434) #20	ENSNLEG00000033714 #21	CCNE1 (ENSNLEG00000007599) #22	ENSNLEG00000032007	ENSNLEG00000007600 #23	ZNF536 (ENSNLEG00000007605) #24	TSHZ3 (ENSNLEG00000007608) #25	ENSNLEG00000007609	DPY19L3 (ENSNLEG00000007610) #27	ENSNLEG00000033870 #28	ANKRD27 (ENSNLEG00000007615) #29	RGS9BP (ENSNLEG00000033989) #30	NUDT19 (ENSNLEG00000007633) #31	ENSNLEG00000007635 #32	SLC7A9 (ENSNLEG00000007638) #33	CEP89 (ENSNLEG00000007643) #34	ENSNLEG00000033704	ENSNLEG00000007654 #35
Cercopithecidae	ANCESTRAL SPECIES	12				ENSGT00940000153236.b.b.b.a.a.b.a.a ##12	ENSGT00940000154251.A.b.b.a.b.b #10	ENSGT00940000153236.b.a.a.b.b.a.b ##12	ENSGT00940000161942.a.a.a.a.b	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.a ##12	ENSGT00940000154940.qb	ENSGT00940000154453.b.a.a.a.b	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000162960.A.c	ENSGT00940000154251.A.a.b ##10	ENSGT00940000162960.D	ENSGT00940000165698.B.a.a	ENSGT00940000163381.a	ENSGT00940000153236.b.b.b.a.a.b.a.a ##12	ENSGT00940000154251.A.b.b.a.b.b #10	ENSGT00940000153236.b.a.a.b.b.a.b ##12	ENSGT00940000161942.a.a.a.a.b.e.b	ENSGT00940000154453.b.a.a.a.b	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36
Vervet Monkey	MODERN SPECIES	25	ENSCSAG00000004919	ZNF724 (ENSCSAG00000004914) ##10	ENSCSAG00000004910 ##12	ENSCSAG00000018506	ENSCSAG00000004906 ##12	ZNF681 (ENSCSAG00000004903) #10	ZNF726 (ENSCSAG00000004902) ##12	ENSCSAG00000004898	ENSCSAG00000004895	ENSCSAG00000004890	UQCRFS1 (ENSCSAG00000004876) #17	VSTM2B (ENSCSAG00000004872) #18	POP4 (ENSCSAG00000004868) #19	PLEKHF1 (ENSCSAG00000018508) #20	C19orf12 (ENSCSAG00000004862) #21	CCNE1 (ENSCSAG00000004850) #22	URI1 (ENSCSAG00000004838) #23	ZNF536 (ENSCSAG00000004832) #24	TSHZ3 (ENSCSAG00000018510) #25	ENSCSAG00000004823	ZNF507 (ENSCSAG00000004822) #26	DPY19L3 (ENSCSAG00000004818) #27	PDCD5 (ENSCSAG00000004815) #28	ANKRD27 (ENSCSAG00000004811) #29	RGS9BP (ENSCSAG00000018513) #30	NUDT19 (ENSCSAG00000004800) #31	TDRD12 (ENSCSAG00000004794) #32	SLC7A9 (ENSCSAG00000004775) #33	CEP89 (ENSCSAG00000004771) #34	FAAP24 (ENSCSAG00000004765) #35	RHPN2 (ENSCSAG00000004761) #36
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000154251.A.a.b ##10	ENSGT00940000162960.D	ENSGT00940000165698.A	ENSGT00940000163381.a	ENSGT00940000161942.a.a.a.a.b.e.a	ENSGT00940000153236.b.a.a.b.b.a.b ##12	ENSGT00940000154251.A.b.b.a.b.b #10	ENSGT00940000153236.b.b.b.a.a.b.a.a ##12	ENSGT00940000153236.b.a.a.b.b.b #12	ENSGT00940000154453.b.a.a.a.b	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Cercopithecinae_b	ANCESTRAL SPECIES	24											ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Olive baboon	MODERN SPECIES	12	ENSPANG00000049799 ##14	ZNF726 (ENSPANG00000010855) ##12	ENSPANG00000002885	ENSPANG00000018392	ZNF681 (ENSPANG00000037775) #10	ENSPANG00000034815	ENSPANG00000044512	ENSPANG00000026433	ENSPANG00000017544 #12	ENSPANG00000048435	UQCRFS1 (ENSPANG00000024986) #17	VSTM2B (ENSPANG00000013391) #18	POP4 (ENSPANG00000008546) #19	PLEKHF1 (ENSPANG00000013107) #20	ENSPANG00000007899 #21	CCNE1 (ENSPANG00000017035) #22	URI1 (ENSPANG00000010974) #23	ZNF536 (ENSPANG00000016643) #24	TSHZ3 (ENSPANG00000001076) #25	ZNF507 (ENSPANG00000010840) #26	DPY19L3 (ENSPANG00000010375) #27	PDCD5 (ENSPANG00000013640) #28	ANKRD27 (ENSPANG00000030136) #29	RGS9BP (ENSPANG00000004020) #30	NUDT19 (ENSPANG00000011363) #31	TDRD12 (ENSPANG00000001203) #32	SLC7A9 (ENSPANG00000001204) #33	CEP89 (ENSPANG00000003158) #34	FAAP24 (ENSPANG00000024282) #35	RHPN2 (ENSPANG00000017034) #36	GPATCH1 (ENSPANG00000012374) #37
Cercopithecinae_d	ANCESTRAL SPECIES	26											ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Drill	MODERN SPECIES	1167											UQCRFS1 (ENSMLEG00000037838) #17	VSTM2B (ENSMLEG00000037367) #18	POP4 (ENSMLEG00000043454) #19	PLEKHF1 (ENSMLEG00000019239) #20	C19orf12 (ENSMLEG00000037130) #21	CCNE1 (ENSMLEG00000039590) #22	URI1 (ENSMLEG00000042881) #23	ENSMLEG00000042025	ZNF536 (ENSMLEG00000040359) #24	TSHZ3 (ENSMLEG00000001629) #25	ENSMLEG00000034458	ZNF507 (ENSMLEG00000043374) #26	DPY19L3 (ENSMLEG00000041227) #27	PDCD5 (ENSMLEG00000034452) #28	ANKRD27 (ENSMLEG00000035681) #29	TDRD12 (ENSMLEG00000042036) #32	SLC7A9 (ENSMLEG00000034139) #33	CEP89 (ENSMLEG00000042877) #34	FAAP24 (ENSMLEG00000034497) #35	RHPN2 (ENSMLEG00000031393) #36	GPATCH1 (ENSMLEG00000043840) #37
Sooty mangabey	MODERN SPECIES	535											UQCRFS1 (ENSCATG00000037427) #17	VSTM2B (ENSCATG00000041422) #18	POP4 (ENSCATG00000036022) #19	PLEKHF1 (ENSCATG00000017587) #20	C19orf12 (ENSCATG00000043372) #21	CCNE1 (ENSCATG00000036730) #22	URI1 (ENSCATG00000041548) #23	ENSCATG00000044280	ZNF536 (ENSCATG00000038060) #24	TSHZ3 (ENSCATG00000027617) #25	ZNF507 (ENSCATG00000032058) #26	DPY19L3 (ENSCATG00000040765) #27	PDCD5 (ENSCATG00000032551) #28	ANKRD27 (ENSCATG00000039085) #29	RGS9BP (ENSCATG00000000718) #30	NUDT19 (ENSCATG00000034824) #31	TDRD12 (ENSCATG00000038627) #32	SLC7A9 (ENSCATG00000032830) #33	CEP89 (ENSCATG00000032749) #34	FAAP24 (ENSCATG00000037414) #35	RHPN2 (ENSCATG00000028263) #36
Macaca	ANCESTRAL SPECIES	12	ENSGT00940000154940.qb	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.a ##12	ENSGT00940000161942.a.a.a.a.b.f	ENSGT00940000153236.b.a.a.b.b.a.b ##12	ENSGT00940000154251.A.b.b.a.b.b #10	ENSGT00940000153236.b.b.b.a.a.b.a.a ##12	ENSGT00910000146855.h	ENSGT00940000153236.b.a.a.b.b.b #12	ENSGT00940000154915.j	ENSGT00940000154453.b.a.a.a.b	ENSGT00390000001014.h #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362.j #23	ENSGT00390000002362.i.a #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000165698.B.a.b	ENSGT00940000165698.A	ENSGT00940000163381.a	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.a ##12	ENSGT00940000153236.b.a.a.b.b.a.b ##12	ENSGT00940000154251.A.b.b.a.b.b #10	ENSGT00910000146855.h	ENSGT00940000153236.b.a.a.b.b.b #12	ENSGT00940000154915.j	ENSGT00940000154453.b.a.a.a.b	ENSGT00390000001014.h #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362.i.a #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT01100000263493.a.a.a.b.b.b.b.a.b.b.b.b	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000030842	ENSMFAG00000001832 ##12	ZNF726 (ENSMFAG00000032109) ##12	ENSMFAG00000040354 #10	ENSMFAG00000065576	ZNF254 (ENSMFAG00000003947) #12	ENSMFAG00000039830	ENSMFAG00000039986	ENSMFAG00000053270	ENSMFAG00000056393	ENSMFAG00000060436 #17	VSTM2B (ENSMFAG00000048636) #18	POP4 (ENSMFAG00000029606) #19	ENSMFAG00000056289	C19orf12 (ENSMFAG00000037046) #21	CCNE1 (ENSMFAG00000041278) #22	URI1 (ENSMFAG00000044813) #23	ZNF536 (ENSMFAG00000042864) #24	ENSMFAG00000058928	TSHZ3 (ENSMFAG00000033604) #25	ENSMFAG00000064547	ZNF507 (ENSMFAG00000031054) #26	DPY19L3 (ENSMFAG00000043628) #27	PDCD5 (ENSMFAG00000044379) #28	ENSMFAG00000051717	ANKRD27 (ENSMFAG00000030329) #29	NUDT19 (ENSMFAG00000042477) #31	ENSMFAG00000059021	TDRD12 (ENSMFAG00000044756) #32	SLC7A9 (ENSMFAG00000002286) #33	CEP89 (ENSMFAG00000001684) #34
Rhesus	MODERN SPECIES	10	ENSMMUG00000037794 ##12	ENSMMUG00000062694	ENSMMUG00000003688	ZNF726 (ENSMMUG00000003645) ##12	ENSMMUG00000061458 #10	ENSMMUG00000065175	ZNF254 (ENSMMUG00000052284) #12	ENSMMUG00000053639	ENSMMUG00000040891	ENSMMUG00000012013	ENSMMUG00000008417 #17	VSTM2B (ENSMMUG00000007392) #18	POP4 (ENSMMUG00000017424) #19	PLEKHF1 (ENSMMUG00000011373) #20	C19H19orf12 (ENSMMUG00000021690) #21	CCNE1 (ENSMMUG00000020668) #22	URI1 (ENSMMUG00000018441) #23	ENSMMUG00000058273	ZNF536 (ENSMMUG00000063586) #24	TSHZ3 (ENSMMUG00000014028) #25	ENSMMUG00000060263	ZNF507 (ENSMMUG00000010840) #26	DPY19L3 (ENSMMUG00000010842) #27	PDCD5 (ENSMMUG00000052666) #28	ANKRD27 (ENSMMUG00000008041) #29	ENSMMUG00000062732	RGS9BP (ENSMMUG00000046695) #30	TDRD12 (ENSMMUG00000015608)	SLC7A9 (ENSMMUG00000028800) #33	CEP89 (ENSMMUG00000018351) #34	FAAP24 (ENSMMUG00000017939) #35
Pig-tailed macaque	MODERN SPECIES	140										ENSMNEG00000029293	ENSMNEG00000030856 #17	VSTM2B (ENSMNEG00000031269) #18	POP4 (ENSMNEG00000031374) #19	PLEKHF1 (ENSMNEG00000037910) #20	C19orf12 (ENSMNEG00000034136) #21	CCNE1 (ENSMNEG00000027421) #22
Rhinopithecus	ANCESTRAL SPECIES	461											ENSGT00390000001014.i #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362.g #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27
Black snub-nosed monkey	MODERN SPECIES	455								ENSRBIG00000001068	ENSRBIG00000034078	ENSRBIG00000011549 #17	ENSRBIG00000036646 #17	VSTM2B (ENSRBIG00000043416) #18	POP4 (ENSRBIG00000044769) #19	PLEKHF1 (ENSRBIG00000015740) #20	C19orf12 (ENSRBIG00000039475) #21	CCNE1 (ENSRBIG00000032298) #22	ENSRBIG00000024225 #23	ENSRBIG00000039664	ZNF536 (ENSRBIG00000039506) #24	TSHZ3 (ENSRBIG00000026412) #25	ZNF507 (ENSRBIG00000034646) #26	DPY19L3 (ENSRBIG00000030615) #27
Golden snub-nosed monkey	MODERN SPECIES	3020											ENSRROG00000045520 #17	VSTM2B (ENSRROG00000039045) #18	POP4 (ENSRROG00000028903) #19	PLEKHF1 (ENSRROG00000024857) #20	C19orf12 (ENSRROG00000036081) #21	CCNE1 (ENSRROG00000032241) #22	ENSRROG00000004401	ENSRROG00000033869 #23	ZNF536 (ENSRROG00000029672) #24	TSHZ3 (ENSRROG00000030098) #25	ZNF507 (ENSRROG00000033058) #26	DPY19L3 (ENSRROG00000030373) #27
Tarsier	MODERN SPECIES	1347																CCNE1 (ENSTSYG00000004852) #22
Strepsirrhini	ANCESTRAL SPECIES	36											ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36
Lemuriformes	ANCESTRAL SPECIES	29											ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36
Mouse lemur	MODERN SPECIES	14											UQCRFS1 (ENSMICG00000027906) #17	VSTM2B (ENSMICG00000044409) #18	POP4 (ENSMICG00000035730) #19	PLEKHF1 (ENSMICG00000015447) #20	C19orf12 (ENSMICG00000046460) #21	CCNE1 (ENSMICG00000006777) #22	ENSMICG00000036638	URI1 (ENSMICG00000006756) #23	ZNF536 (ENSMICG00000035640) #24	TSHZ3 (ENSMICG00000027677) #25	ZNF507 (ENSMICG00000012333) #26	DPY19L3 (ENSMICG00000012369) #27	PDCD5 (ENSMICG00000000417) #28	ENSMICG00000041547 #29	ENSMICG00000000420 #29	NUDT19 (ENSMICG00000037570) #31	TDRD12 (ENSMICG00000003623) #32	SLC7A9 (ENSMICG00000046921) #33	CEP89 (ENSMICG00000003646) #34	FAAP24 (ENSMICG00000044088) #35	RHPN2 (ENSMICG00000003663) #36
Lemuriformes_a	ANCESTRAL SPECIES	158											ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36
Coquerels sifaka	MODERN SPECIES	363												UQCRFS1 (ENSPCOG00000015205) #17	VSTM2B (ENSPCOG00000015905) #18	POP4 (ENSPCOG00000018055) #19	C19orf12 (ENSPCOG00000002733) #21	CCNE1 (ENSPCOG00000000361) #22	URI1 (ENSPCOG00000019426) #23	ZNF536 (ENSPCOG00000017326) #24	TSHZ3 (ENSPCOG00000023437) #25	ZNF507 (ENSPCOG00000017580) #26	DPY19L3 (ENSPCOG00000016162) #27	ENSPCOG00000017218 #28	ANKRD27 (ENSPCOG00000013416) #29	TDRD12 (ENSPCOG00000023600) #32	SLC7A9 (ENSPCOG00000026968) #33	ENSPCOG00000011220	CEP89 (ENSPCOG00000009646) #34	FAAP24 (ENSPCOG00000020206) #35	RHPN2 (ENSPCOG00000016163) #36	GPATCH1 (ENSPCOG00000009674) #37	WDR88 (ENSPCOG00000025378)
Greater bamboo lemur	MODERN SPECIES	775																CCNE1 (ENSPSMG00000015575) #22	URI1 (ENSPSMG00000015493) #23	ZNF536 (ENSPSMG00000015452) #24	ENSPSMG00000015427	TSHZ3 (ENSPSMG00000015407) #25	ZNF507 (ENSPSMG00000015392) #26	DPY19L3 (ENSPSMG00000015366) #27	PDCD5 (ENSPSMG00000015313) #28	ENSPSMG00000015281	ANKRD27 (ENSPSMG00000015253) #29	RGS9BP (ENSPSMG00000015153) #30	ENSPSMG00000015151	NUDT19 (ENSPSMG00000015148) #31	TDRD12 (ENSPSMG00000015114) #32	SLC7A9 (ENSPSMG00000015023) #33	CEP89 (ENSPSMG00000015002) #34
Bushbaby	MODERN SPECIES	250											UQCRFS1 (ENSOGAG00000026492) #17	VSTM2B (ENSOGAG00000029203) #18	POP4 (ENSOGAG00000011168) #19	PLEKHF1 (ENSOGAG00000033399) #20	C19orf12 (ENSOGAG00000012719) #21	CCNE1 (ENSOGAG00000006217) #22	ENSOGAG00000025344	URI1 (ENSOGAG00000015310) #23	ZNF536 (ENSOGAG00000003997) #24	TSHZ3 (ENSOGAG00000032636) #25	ZNF507 (ENSOGAG00000002674) #26	DPY19L3 (ENSOGAG00000002677) #27	ENSOGAG00000033236	PDCD5 (ENSOGAG00000025274) #28	ANKRD27 (ENSOGAG00000015112) #29	RGS9BP (ENSOGAG00000032941) #30	NUDT19 (ENSOGAG00000026276) #31	TDRD12 (ENSOGAG00000001571) #32	SLC7A9 (ENSOGAG00000012118) #33	CEP89 (ENSOGAG00000001573) #34	FAAP24 (ENSOGAG00000001576) #35
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00990000204193	ENSGT00390000005105	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000163206.a	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Glires	ANCESTRAL SPECIES	6	ENSGT00940000156041	ENSGT00990000204193	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000163206.a	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000156041	ENSGT00990000204193	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000163206.a	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00390000013367	ENSGT00940000156041	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000163206.a	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00390000013367	ENSGT00940000156041	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000163206.a	ENSGT00940000161310	ENSGT00390000001014.s #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Marmotini	ANCESTRAL SPECIES	7											ENSGT00390000001014.s #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Alpin marmot	MODERN SPECIES	45												VSTM2B (ENSMMMG00000007454) #18	POP4 (ENSMMMG00000007446) #19	PLEKHF1 (ENSMMMG00000007421) #20	C19orf12 (ENSMMMG00000007391) #21	CCNE1 (ENSMMMG00000007385) #22	URI1 (ENSMMMG00000007374) #23	ZNF536 (ENSMMMG00000007356) #24	TSHZ3 (ENSMMMG00000007335) #25	ZNF507 (ENSMMMG00000007322) #26	DPY19L3 (ENSMMMG00000007308) #27	PDCD5 (ENSMMMG00000007305) #28	ANKRD27 (ENSMMMG00000007203) #29	RGS9BP (ENSMMMG00000007176) #30	NUDT19 (ENSMMMG00000007175) #31	TDRD12 (ENSMMMG00000007074) #32	SLC7A9 (ENSMMMG00000007036) #33	CEP89 (ENSMMMG00000006832) #34	FAAP24 (ENSMMMG00000006814) #35	RHPN2 (ENSMMMG00000006785) #36	GPATCH1 (ENSMMMG00000006748) #37
Marmotini_b	ANCESTRAL SPECIES	50											ENSGT00390000001014.s #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Arctic ground squirrel	MODERN SPECIES	86											UQCRFS1 (ENSUPAG00010009946) #17	VSTM2B (ENSUPAG00010009950) #18	POP4 (ENSUPAG00010009976) #19	PLEKHF1 (ENSUPAG00010009986) #20	C19orf12 (ENSUPAG00010009992) #21	CCNE1 (ENSUPAG00010010001) #22	URI1 (ENSUPAG00010010020) #23	ZNF536 (ENSUPAG00010010061) #24	TSHZ3 (ENSUPAG00010010104) #25	ZNF507 (ENSUPAG00010010113) #26	PDCD5 (ENSUPAG00010010174) #28	ANKRD27 (ENSUPAG00010010181) #29	RGS9BP (ENSUPAG00010010233) #30	TDRD12 (ENSUPAG00010010237) #32	SLC7A9 (ENSUPAG00010010354) #33	CEP89 (ENSUPAG00010010410) #34	ENSUPAG00010010487 #35	RHPN2 (ENSUPAG00010010489) #36	GPATCH1 (ENSUPAG00010010496) #37	ENSUPAG00010010526	ENSUPAG00010010532
Squirrel	MODERN SPECIES	170											ENSSTOG00000011909 #17	VSTM2B (ENSSTOG00000020445) #18	POP4 (ENSSTOG00000011016) #19	PLEKHF1 (ENSSTOG00000023108) #20	C19orf12 (ENSSTOG00000020602) #21	CCNE1 (ENSSTOG00000009648) #22	URI1 (ENSSTOG00000009658) #23	ZNF536 (ENSSTOG00000013259) #24	TSHZ3 (ENSSTOG00000024242) #25	ZNF507 (ENSSTOG00000022278) #26	DPY19L3 (ENSSTOG00000025908) #27	PDCD5 (ENSSTOG00000025794) #28	ANKRD27 (ENSSTOG00000013613) #29	RGS9BP (ENSSTOG00000027616) #30	ENSSTOG00000031724 #31	TDRD12 (ENSSTOG00000013638) #32	SLC7A9 (ENSSTOG00000013674) #33	CEP89 (ENSSTOG00000019373) #34	RHPN2 (ENSSTOG00000002103) #36	GPATCH1 (ENSSTOG00000003720) #37	LRP3 (ENSSTOG00000009443)
Eurasian red squirrel	MODERN SPECIES	8	ENSSVLG00005018900	MYLK3 (ENSSVLG00005018924)	ENSSVLG00005019080	VPS35 (ENSSVLG00005019175)	ENSSVLG00005019566	SHCBP1 (ENSSVLG00005019832)	ENSSVLG00005019872	ENSSVLG00005019913	ENSSVLG00005019946	ENSSVLG00005020000	ENSSVLG00005020050 #17	VSTM2B (ENSSVLG00005020091) #18	POP4 (ENSSVLG00005020169) #19	PLEKHF1 (ENSSVLG00005020227) #20	ENSSVLG00005020245 #21	CCNE1 (ENSSVLG00005020303) #22	URI1 (ENSSVLG00005020418) #23	ZNF536 (ENSSVLG00005020746) #24	TSHZ3 (ENSSVLG00005020787) #25	ZNF507 (ENSSVLG00005020811) #26	DPY19L3 (ENSSVLG00005020851) #27	ENSSVLG00005020933 #28	ANKRD27 (ENSSVLG00005021121) #29	RGS9BP (ENSSVLG00005021208) #30	NUDT19 (ENSSVLG00005021230) #31	TDRD12 (ENSSVLG00005021333) #32	SLC7A9 (ENSSVLG00005021851) #33	CEP89 (ENSSVLG00005021928) #34	ENSSVLG00005021973 #35	RHPN2 (ENSSVLG00005022031) #36	GPATCH1 (ENSSVLG00005022166) #37
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT01100000263475.d.a.g.a.b.g	ENSGT01100000263475.d.a.g.b.b.b	ENSGT01100000263475.d.a.h	ENSGT00940000155795	ENSGT01050000244808.D.fb.b.b.a	ENSGT00940000161974	ENSGT01050000244808.D.fb.b.a.b	ENSGT01050000244808.D.fb.b.b.b	ENSGT01050000244808.D.fb.b.a.a.a.a	ENSGT01050000244808.D.fb.b.a.a.a.b	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085.nb #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00940000162407
Hystricomorpha_a	ANCESTRAL SPECIES	11	ENSGT01100000263475.d.a.g.a.b.h	ENSGT01100000263475.d.a.g.a.b.g	ENSGT01100000263475.d.a.g.b.b.b	ENSGT01100000263475.d.a.h	ENSGT00940000155795	ENSGT01050000244808.D.fb.b.b.a	ENSGT00940000161974	ENSGT01050000244808.D.fb.b.a.b	ENSGT01050000244808.D.fb.b.b.b	ENSGT01050000244808.D.fb.b.a.a.a.b	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085.nb #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00940000162407
Hystricomorpha_b	ANCESTRAL SPECIES	8	ENSGT01100000263475.d.a.g.a.b.h	ENSGT01100000263475.d.a.g.a.b.g	ENSGT01100000263475.d.a.g.b.b.b	ENSGT01100000263475.d.a.h	ENSGT00940000155795	ENSGT01050000244808.D.fb.b.b.a	ENSGT00940000161974	ENSGT01050000244808.D.fb.b.a.b	ENSGT01050000244808.D.fb.b.b.b	ENSGT01050000244808.D.fb.b.a.a.a.b	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085.nb #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00940000162407
Long-tailed chinchilla	MODERN SPECIES	175	ENSCLAG00000013915	ENSCLAG00000011957	CD1C (ENSCLAG00000015364)	CD1D (ENSCLAG00000013027)	KIRREL1 (ENSCLAG00000013814)	ENSCLAG00000015395	CD5L (ENSCLAG00000015227)	FCRL1 (ENSCLAG00000014567)	FCRL3 (ENSCLAG00000012604)	FCRL5 (ENSCLAG00000011767)	UQCRFS1 (ENSCLAG00000011437) #17	VSTM2B (ENSCLAG00000016538) #18	POP4 (ENSCLAG00000013162) #19	PLEKHF1 (ENSCLAG00000012584) #20	C19orf12 (ENSCLAG00000015360) #21	CCNE1 (ENSCLAG00000016202) #22	URI1 (ENSCLAG00000014617) #23	ZNF536 (ENSCLAG00000014818) #24	TSHZ3 (ENSCLAG00000012902) #25	ZNF507 (ENSCLAG00000012690) #26	DPY19L3 (ENSCLAG00000013128) #27	ENSCLAG00000014452 #28	ENSCLAG00000013353 #29	RGS9BP (ENSCLAG00000017932) #30	NUDT19 (ENSCLAG00000015394) #31	TDRD12 (ENSCLAG00000012138) #32	SLC7A9 (ENSCLAG00000012671) #33	ENSCLAG00000012488 #34	FAAP24 (ENSCLAG00000013484) #35	RHPN2 (ENSCLAG00000011890) #36	ETV2 (ENSCLAG00000011446)
Degu	MODERN SPECIES	124			ENSODEG00000013323	CD5L (ENSODEG00000012955)	ENSODEG00000014146	ENSODEG00000020181	ENSODEG00000014952	UQCRFS1 (ENSODEG00000014654) #17	ENSODEG00000013453	VSTM2B (ENSODEG00000014510) #18	POP4 (ENSODEG00000013025) #19	ENSODEG00000020166 #20	ENSODEG00000020216	C19orf12 (ENSODEG00000013188) #21	ENSODEG00000020140	CCNE1 (ENSODEG00000014690) #22	URI1 (ENSODEG00000013616) #23	ZNF536 (ENSODEG00000013676) #24	TSHZ3 (ENSODEG00000013840) #25	ENSODEG00000014205	ENSODEG00000013993 #26	DPY19L3 (ENSODEG00000013833) #27	ENSODEG00000013248 #28	ANKRD27 (ENSODEG00000013621) #29	RGS9BP (ENSODEG00000020326) #30	NUDT19 (ENSODEG00000014770) #31	TDRD12 (ENSODEG00000014443) #32	ENSODEG00000014355 #33	ENSODEG00000015062 #33	CEP89 (ENSODEG00000014225) #34	FAAP24 (ENSODEG00000013890) #35
Guinea pig	MODERN SPECIES	56	ENSCPOG00000037513	ENSCPOG00000030928	CD1D (ENSCPOG00000013837)	ENSCPOG00000036278	KIRREL1 (ENSCPOG00000004317)	ENSCPOG00000001646	CD5L (ENSCPOG00000002911)	FCRL1 (ENSCPOG00000031919)	ENSCPOG00000005105	ENSCPOG00000020010	UQCRFS1 (ENSCPOG00000038582) #17	VSTM2B (ENSCPOG00000022127) #18	POP4 (ENSCPOG00000002992) #19	PLEKHF1 (ENSCPOG00000036685) #20	C19orf12 (ENSCPOG00000021635) #21	CCNE1 (ENSCPOG00000004836) #22	URI1 (ENSCPOG00000004105) #23	ZNF536 (ENSCPOG00000008744) #24	TSHZ3 (ENSCPOG00000003591) #25	ENSCPOG00000012473 #26	DPY19L3 (ENSCPOG00000012483) #27	PDCD5 (ENSCPOG00000040356) #28	ANKRD27 (ENSCPOG00000000160) #29	RGS9BP (ENSCPOG00000000730) #30	NUDT19 (ENSCPOG00000038218) #31	TDRD12 (ENSCPOG00000002876) #32	ENSCPOG00000034999 #33	ENSCPOG00000030866 #33	ENSCPOG00000011225 #33	CEP89 (ENSCPOG00000001470) #34	FAAP24 (ENSCPOG00000011965) #35
Naked mole-rat female	MODERN SPECIES	20	ENSHGLG00000020301	ENSHGLG00000020506	ENSHGLG00000013249	ENSHGLG00000016598	ENSHGLG00000008016	CD5L (ENSHGLG00000006555)	FCRL1 (ENSHGLG00000005552)	ENSHGLG00000005888	ENSHGLG00000049204	UQCRFS1 (ENSHGLG00000046640) #17	ENSHGLG00000034008	VSTM2B (ENSHGLG00000010328) #18	POP4 (ENSHGLG00000043121) #19	PLEKHF1 (ENSHGLG00000015663) #20	C19orf12 (ENSHGLG00000013665) #21	CCNE1 (ENSHGLG00000005512) #22	URI1 (ENSHGLG00000009294) #23	ZNF536 (ENSHGLG00000013749) #24	TSHZ3 (ENSHGLG00000015820) #25	ENSHGLG00000048014	ZNF507 (ENSHGLG00000014642) #26	DPY19L3 (ENSHGLG00000008160) #27	PDCD5 (ENSHGLG00000015879) #28	ENSHGLG00000000739 #29	RGS9BP (ENSHGLG00000043502) #30	ENSHGLG00000033957	ENSHGLG00000032764	ENSHGLG00000049663	TDRD12 (ENSHGLG00000015608) #32	CEP89 (ENSHGLG00000015749) #34	FAAP24 (ENSHGLG00000047787) #35
Rodentia_B	ANCESTRAL SPECIES	20												ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Myomorpha	ANCESTRAL SPECIES	20												ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Muroidea	ANCESTRAL SPECIES	18												ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Muroidea_A	ANCESTRAL SPECIES	20									ENSGT00940000163087	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356 #18	ENSGT00390000014208	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Cricetidae	ANCESTRAL SPECIES	26									ENSGT00940000163087	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356 #18	ENSGT00390000014208	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Cricetinae	ANCESTRAL SPECIES	39													ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Golden Hamster	MODERN SPECIES	734												Pop4 (ENSMAUG00000020110) #19	Plekhf1 (ENSMAUG00000021194) #20	ENSMAUG00000006470	1600014C10Rik (ENSMAUG00000011583) #21	Ccne1 (ENSMAUG00000003256) #22	ENSMAUG00000020272 #23	Zfp536 (ENSMAUG00000016748) #24	Zfp507 (ENSMAUG00000014669) #26	Dpy19l3 (ENSMAUG00000013178) #27	Ankrd27 (ENSMAUG00000006822) #29	Rgs9bp (ENSMAUG00000010703) #30	Nudt19 (ENSMAUG00000012791) #31	Tdrd12 (ENSMAUG00000013767) #32	Slc7a9 (ENSMAUG00000016182) #33	Cep89 (ENSMAUG00000010643) #34	Faap24 (ENSMAUG00000015057) #35	Rhpn2 (ENSMAUG00000002669) #36	Lrp3 (ENSMAUG00000022101)	Slc7a10 (ENSMAUG00000007653)	Cebpa (ENSMAUG00000003660)
Chinese hamster chok1gshd	MODERN SPECIES	282												ENSCGRG00001013673	ENSCGRG00001012663	Plekhf1 (ENSCGRG00001014179) #20	1600014C10Rik (ENSCGRG00001014004) #21	Ccne1 (ENSCGRG00001015867) #22	Uri1 (ENSCGRG00001019892) #23	Zfp536 (ENSCGRG00001014547) #24	Tshz3 (ENSCGRG00001015566) #25	Zfp507 (ENSCGRG00001020787) #26	Dpy19l3 (ENSCGRG00001022217) #27	ENSCGRG00001014250	ENSCGRG00001016049 #28	Ankrd27 (ENSCGRG00001018594) #29	Rgs9bp (ENSCGRG00001006642) #30	Nudt19 (ENSCGRG00001017272) #31	Tdrd12 (ENSCGRG00001021407) #32	Slc7a9 (ENSCGRG00001005745) #33	ENSCGRG00001000081	Faap24 (ENSCGRG00001012863) #35	Rhpn2 (ENSCGRG00001013772) #36
Cricetidae_B	ANCESTRAL SPECIES	25									ENSGT00940000163087	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00940000161356 #18	ENSGT00390000014208	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Northern American deer mouse	MODERN SPECIES		Samd4b (ENSPEMG00000018812)	Paf1 (ENSPEMG00000011044)	Med29 (ENSPEMG00000018482)	Zfp36 (ENSPEMG00000007506)	Plekhg2 (ENSPEMG00000017217)	ENSPEMG00000027743	ENSPEMG00000024631	Zfp619 (ENSPEMG00000021007)	ENSPEMG00000024496	Vstm2b (ENSPEMG00000021557) #18	ENSPEMG00000026788	ENSPEMG00000019774	ENSPEMG00000026755	ENSPEMG00000014034 #19	1600014C10Rik (ENSPEMG00000030733) #21	Ccne1 (ENSPEMG00000020299) #22	Uri1 (ENSPEMG00000021114) #23	Zfp536 (ENSPEMG00000014198) #24	Tshz3 (ENSPEMG00000024219) #25	Zfp507 (ENSPEMG00000023579) #26	Dpy19l3 (ENSPEMG00000020636) #27	Pdcd5 (ENSPEMG00000005766) #28	Ankrd27 (ENSPEMG00000020526) #29	Rgs9bp (ENSPEMG00000001852) #30	Nudt19 (ENSPEMG00000020519) #31	ENSPEMG00000022578	Tdrd12 (ENSPEMG00000009233) #32	Slc7a9 (ENSPEMG00000020346) #33	Cep89 (ENSPEMG00000020557) #34	Faap24 (ENSPEMG00000021083) #35	Rhpn2 (ENSPEMG00000020482) #36
Prairie vole	MODERN SPECIES	115														Plekhf1 (ENSMOCG00000017276) #20	1600014C10Rik (ENSMOCG00000007337) #21	Ccne1 (ENSMOCG00000008837) #22	Uri1 (ENSMOCG00000018448) #23	Zfp536 (ENSMOCG00000011684) #24	Tshz3 (ENSMOCG00000012794) #25	ENSMOCG00000015706	Zfp507 (ENSMOCG00000017422) #26	Dpy19l3 (ENSMOCG00000009571) #27	ENSMOCG00000016930 #28	Ankrd27 (ENSMOCG00000013668) #29	Rgs9bp (ENSMOCG00000002309) #30	Nudt19 (ENSMOCG00000017828) #31	Tdrd12 (ENSMOCG00000002366) #32	Slc7a9 (ENSMOCG00000001789) #33	Cep89 (ENSMOCG00000000261) #34	Faap24 (ENSMOCG00000017357) #35	Rhpn2 (ENSMOCG00000015268) #36
Murinae	ANCESTRAL SPECIES	19												ENSGT00390000014208.y.b	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Mus	ANCESTRAL SPECIES		ENSGT01050000244814.a.a.b.b.b.a.a	ENSGT00660000097488	ENSGT01080000257333.A.a.a	ENSGT01080000257333.A.a.b.a.b.b.a.a.d.a	ENSGT00940000163075	ENSGT00940000155965.t	ENSGT00940000153165.a.a.c.b.a.b.a	ENSGT00390000014208.y.a	ENSGT00390000014208.z	ENSGT00940000161356 #18	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00390000014208.y.b	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Mus_A	ANCESTRAL SPECIES	1	ENSGT01080000257333.A.a.b.a.b.b.a.a.d.a	ENSGT00860000135684	ENSGT00940000154411.`b.i.f.kc.a.b	ENSGT00940000155965.t	ENSGT00940000153165.a.a.c.b.a.b.a	ENSGT00950000183069.b.b.a.a.e.a.a.b.a.b.b	ENSGT00940000154469.a.a.b.b.b	ENSGT00390000014208.y.a	ENSGT00390000014208.z	ENSGT00940000161356 #18	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00390000014208.y.b	ENSGT00390000010067 #19	ENSGT00940000160728.e #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Mus_B	ANCESTRAL SPECIES		ENSGT00860000135684	ENSGT00940000154411.`b.i.f.kc.a.b	ENSGT00950000183069.b.b.a.a.e.a.a.b.a.a.a.a.b	ENSGT00940000155965.t	ENSGT00940000153165.a.a.c.b.a.b.a	ENSGT00950000183069.b.b.a.a.e.a.a.b.a.b.b	ENSGT00940000154469.a.a.b.b.b	ENSGT00390000014208.y.a.a.a	ENSGT00390000014208.z	ENSGT00940000161356 #18	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00390000014208.y.b.a	ENSGT00390000010067 #19	ENSGT00940000160728.e #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Mus_C	ANCESTRAL SPECIES	32										ENSGT00940000154469.a.a.b.b.b	ENSGT00940000161356 #18	ENSGT01030000234576.D.a.b.b.b.g.b	ENSGT00390000010067 #19	ENSGT00940000160728.e #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Steppe mouse	MODERN SPECIES	2838													Pop4 (ENSMSIG00000028841) #19	Plekhf1 (ENSMSIG00000028840) #20	1600014C10Rik (ENSMSIG00000028833) #21	Ccne1 (ENSMSIG00000028826) #22	Uri1 (ENSMSIG00000028815) #23	Zfp536 (ENSMSIG00000028793) #24
spretus	MODERN SPECIES	16	MGP_SPRETEiJ_G0030712	MGP_SPRETEiJ_G0030710	MGP_SPRETEiJ_G0030709	MGP_SPRETEiJ_G0030708	Zfp788 (MGP_SPRETEiJ_G0030707)	MGP_SPRETEiJ_G0030706	MGP_SPRETEiJ_G0030705	AW146154 (MGP_SPRETEiJ_G0030704)	AI987944 (MGP_SPRETEiJ_G0030703)	Vstm2b (MGP_SPRETEiJ_G0030702) #18	Zfp619 (MGP_SPRETEiJ_G0030701)	MGP_SPRETEiJ_G0030700	Pop4 (MGP_SPRETEiJ_G0030699) #19	Plekhf1 (MGP_SPRETEiJ_G0030698) #20	1600014C10Rik (MGP_SPRETEiJ_G0030697) #21	Ccne1 (MGP_SPRETEiJ_G0030696) #22	Uri1 (MGP_SPRETEiJ_G0030695) #23	Zfp536 (MGP_SPRETEiJ_G0030694) #24	Tshz3 (MGP_SPRETEiJ_G0030693) #25	Zfp507 (MGP_SPRETEiJ_G0030692) #26	Dpy19l3 (MGP_SPRETEiJ_G0030691) #27	Pdcd5 (MGP_SPRETEiJ_G0030690) #28	Ankrd27 (MGP_SPRETEiJ_G0030689) #29	Rgs9bp (MGP_SPRETEiJ_G0030688) #30	Tdrd12 (MGP_SPRETEiJ_G0030686) #32	Slc7a9 (MGP_SPRETEiJ_G0030685) #33	Cep89 (MGP_SPRETEiJ_G0030684) #34	Faap24 (MGP_SPRETEiJ_G0030683) #35	Rhpn2 (MGP_SPRETEiJ_G0030682) #36	Gpatch1 (MGP_SPRETEiJ_G0030681) #37	Lrp3 (MGP_SPRETEiJ_G0030680)
Mouse	MODERN SPECIES	16	2610021A01Rik (ENSMUSG00000091474)	Gm6871 (ENSMUSG00000090744)	AW146154 (ENSMUSG00000074166)	Vmn2r57 (ENSMUSG00000066537)	AI987944 (ENSMUSG00000056383)	Gm5592 (ENSMUSG00000072259)	Gm4884 (ENSMUSG00000048312)	4930433I11Rik (ENSMUSG00000091692)	Vstm2b (ENSMUSG00000039257) #18	Zfp619 (ENSMUSG00000068959)	Gm5114 (ENSMUSG00000053742)	Gm5591 (ENSMUSG00000060565)	Pop4 (ENSMUSG00000030423) #19	Plekhf1 (ENSMUSG00000074170) #20	1600014C10Rik (ENSMUSG00000054676) #21	Ccne1 (ENSMUSG00000002068) #22	Uri1 (ENSMUSG00000030421) #23	Zfp536 (ENSMUSG00000043456) #24	Tshz3 (ENSMUSG00000021217) #25	Zfp507 (ENSMUSG00000044452) #26	Dpy19l3 (ENSMUSG00000043671) #27	Pdcd5 (ENSMUSG00000030417) #28	Ankrd27 (ENSMUSG00000034867) #29	Rgs9bp (ENSMUSG00000056043) #30	Nudt19 (ENSMUSG00000034875) #31	Tdrd12 (ENSMUSG00000030491) #32	Slc7a9 (ENSMUSG00000030492) #33	Cep89 (ENSMUSG00000023072) #34	Faap24 (ENSMUSG00000030493) #35	Rhpn2 (ENSMUSG00000030494) #36	Gpatch1 (ENSMUSG00000063808) #37
Ryukyu mouse	MODERN SPECIES	16	Zfp715 (MGP_CAROLIEiJ_G0029614)	MGP_CAROLIEiJ_G0029613	Zfp141 (MGP_CAROLIEiJ_G0029612)	MGP_CAROLIEiJ_G0029611	MGP_CAROLIEiJ_G0029609	MGP_CAROLIEiJ_G0029610	Zfp788 (MGP_CAROLIEiJ_G0029608)	MGP_CAROLIEiJ_G0029606	MGP_CAROLIEiJ_G0029605	AI987944 (MGP_CAROLIEiJ_G0029604)	Vstm2b (MGP_CAROLIEiJ_G0029603) #18	Zfp619 (MGP_CAROLIEiJ_G0029602)	Pop4 (MGP_CAROLIEiJ_G0029600) #19	Plekhf1 (MGP_CAROLIEiJ_G0029599) #20	MGP_CAROLIEiJ_G0029598 #21	Ccne1 (MGP_CAROLIEiJ_G0029597) #22	Uri1 (MGP_CAROLIEiJ_G0029596) #23	Zfp536 (MGP_CAROLIEiJ_G0029595) #24	Tshz3 (MGP_CAROLIEiJ_G0029594) #25	Zfp507 (MGP_CAROLIEiJ_G0029593) #26	Dpy19l3 (MGP_CAROLIEiJ_G0029592) #27	MGP_CAROLIEiJ_G0029591 #28	Ankrd27 (MGP_CAROLIEiJ_G0029590) #29	Rgs9bp (MGP_CAROLIEiJ_G0029589) #30	Nudt19 (MGP_CAROLIEiJ_G0029588) #31	Tdrd12 (MGP_CAROLIEiJ_G0029587) #32	Slc7a9 (MGP_CAROLIEiJ_G0029586) #33	Cep89 (MGP_CAROLIEiJ_G0029585) #34	Faap24 (MGP_CAROLIEiJ_G0029584) #35	Rhpn2 (MGP_CAROLIEiJ_G0029583) #36	Gpatch1 (MGP_CAROLIEiJ_G0029582) #37
Shrew mouse	MODERN SPECIES		Lim2 (MGP_PahariEiJ_G0012847)	MGP_PahariEiJ_G0012846	MGP_PahariEiJ_G0012845	Siglecg (MGP_PahariEiJ_G0012844)	Siglecf (MGP_PahariEiJ_G0012843)	MGP_PahariEiJ_G0012842	Zfp788 (MGP_PahariEiJ_G0012841)	MGP_PahariEiJ_G0012840	2610021A01Rik (MGP_PahariEiJ_G0012839)	AI987944 (MGP_PahariEiJ_G0012838)	MGP_PahariEiJ_G0012836	Vstm2b (MGP_PahariEiJ_G0012835) #18	MGP_PahariEiJ_G0012834	Plekhf1 (MGP_PahariEiJ_G0012833) #20	1600014C10Rik (MGP_PahariEiJ_G0012832) #21	Ccne1 (MGP_PahariEiJ_G0012831) #22	Uri1 (MGP_PahariEiJ_G0012830) #23	Zfp536 (MGP_PahariEiJ_G0012829) #24	Tshz3 (MGP_PahariEiJ_G0012828) #25	Zfp507 (MGP_PahariEiJ_G0012827) #26	Dpy19l3 (MGP_PahariEiJ_G0012826) #27	MGP_PahariEiJ_G0012825 #28	Ankrd27 (MGP_PahariEiJ_G0012824) #29	Rgs9bp (MGP_PahariEiJ_G0012823) #30	Nudt19 (MGP_PahariEiJ_G0012822) #31	Tdrd12 (MGP_PahariEiJ_G0012821) #32	Slc7a9 (MGP_PahariEiJ_G0012820) #33	Cep89 (MGP_PahariEiJ_G0012819) #34	Faap24 (MGP_PahariEiJ_G0012818) #35	Rhpn2 (MGP_PahariEiJ_G0012817) #36	Gpatch1 (MGP_PahariEiJ_G0012816) #37
Rat	MODERN SPECIES		ENSRNOG00000014455	C1h2orf78 (ENSRNOG00000027102)	MGC114499 (ENSRNOG00000027112)	Vstm2b (ENSRNOG00000017456) #18	Cdc42se2 (ENSRNOG00000037364)	LOC102548320 (ENSRNOG00000069276)	Zfp619 (ENSRNOG00000066986)	Zfp939 (ENSRNOG00000064970)	LOC108348090 (ENSRNOG00000067296)	LOC365238 (ENSRNOG00000015168)	LOC690114 (ENSRNOG00000027370)	Marf1-ps1 (ENSRNOG00000051237)	Pop4 (ENSRNOG00000027646) #19	Plekhf1 (ENSRNOG00000027724) #20	LOC690000 (ENSRNOG00000014966) #21	Ccne1 (ENSRNOG00000014786) #22	Uri1 (ENSRNOG00000014463) #23	Zfp536 (ENSRNOG00000014163) #24	RGD1562402 (ENSRNOG00000031859)	Tshz3 (ENSRNOG00000013938) #25	Zfp507 (ENSRNOG00000013565) #26	Dpy19l3 (ENSRNOG00000021573) #27	Pdcd5 (ENSRNOG00000068327) #28	Ankrd27 (ENSRNOG00000052814) #29	Rgs9bp (ENSRNOG00000012877) #30	Nudt19 (ENSRNOG00000059386) #31	AC136661.1 (ENSRNOG00000037380)	Tdrd12 (ENSRNOG00000012719) #32	Slc7a9 (ENSRNOG00000012344) #33	Cep89 (ENSRNOG00000012140) #34	Faap24 (ENSRNOG00000022393) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	451													ENSNGAG00000021535 #19	Plekhf1 (ENSNGAG00000018974) #20	1600014C10Rik (ENSNGAG00000021727) #21	Ccne1 (ENSNGAG00000016348) #22	Uri1 (ENSNGAG00000023240) #23	Zfp536 (ENSNGAG00000023797) #24
Lesser Egyptian jerboa	MODERN SPECIES	73	ENSJJAG00000009076	ENSJJAG00000022671	Lnx2 (ENSJJAG00000014998)	Mtif3 (ENSJJAG00000013006)	Gtf3a (ENSJJAG00000011501)	Rasl11a (ENSJJAG00000020910)	Usp12 (ENSJJAG00000019341)	Gpr12 (ENSJJAG00000012507)	Wasf3 (ENSJJAG00000018294)	Cdk8 (ENSJJAG00000009532)	Rnf6 (ENSJJAG00000023994)	Vstm2b (ENSJJAG00000022517) #18	Pop4 (ENSJJAG00000013376) #19	Plekhf1 (ENSJJAG00000011982) #20	1600014C10Rik (ENSJJAG00000015651) #21	Ccne1 (ENSJJAG00000013552) #22	Uri1 (ENSJJAG00000017190) #23	Zfp536 (ENSJJAG00000005397) #24	ENSJJAG00000018135 #25	ENSJJAG00000014559 #26	Dpy19l3 (ENSJJAG00000011397) #27	ENSJJAG00000016867 #28	Ankrd27 (ENSJJAG00000016506) #29	Rgs9bp (ENSJJAG00000012886) #30	ENSJJAG00000018149 #32	Slc7a9 (ENSJJAG00000014613) #33	Cep89 (ENSJJAG00000024207) #34	ENSJJAG00000012680 #35	Rhpn2 (ENSJJAG00000001747) #36	Gpatch1 (ENSJJAG00000023765) #37	Lrp3 (ENSJJAG00000017356)
Kangaroo rat	MODERN SPECIES	411															Uqcrfs1 (ENSDORG00000004134) #17	Ccne1 (ENSDORG00000007955) #22	Uri1 (ENSDORG00000012581) #23	Zfp536 (ENSDORG00000015237) #24	ENSDORG00000026232 #25	ENSDORG00000013877 #26	Dpy19l3 (ENSDORG00000009853) #27	Pdcd5 (ENSDORG00000023317) #28	Ankrd27 (ENSDORG00000001832) #29	Rgs9bp (ENSDORG00000015832) #30	ENSDORG00000026153 #31	Tdrd12 (ENSDORG00000012134) #32	Slc7a9 (ENSDORG00000026148) #33	Cep89 (ENSDORG00000013896) #34	Rhpn2 (ENSDORG00000010758) #36	Gpatch1 (ENSDORG00000012546) #37	Lrp3 (ENSDORG00000002320)
Lagomorpha	ANCESTRAL SPECIES	121												ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	455												ENSOCUG00000029273 #17	VSTM2B (ENSOCUG00000023884) #18	POP4 (ENSOCUG00000015974) #19	C19orf12 (ENSOCUG00000002865) #21	ENSOCUG00000009143 #22	URI1 (ENSOCUG00000015063) #23	ZNF536 (ENSOCUG00000022631) #24	ENSOCUG00000024019	TSHZ3 (ENSOCUG00000015902) #25	ZNF507 (ENSOCUG00000014069) #26	DPY19L3 (ENSOCUG00000013196) #27	PDCD5 (ENSOCUG00000013220) #28	ANKRD27 (ENSOCUG00000013225) #29	RGS9BP (ENSOCUG00000001135) #30	NUDT19 (ENSOCUG00000032610) #31	ENSOCUG00000013666
Rabbit	MODERN SPECIES	4	PIK3CD (ENSOCUG00000011054)	CLSTN1 (ENSOCUG00000011064)	CTNNBIP1 (ENSOCUG00000030596)	LZIC (ENSOCUG00000025623)	ENSOCUG00000023212	UBE4B (ENSOCUG00000016997)	KIF1B (ENSOCUG00000002763)	PGD (ENSOCUG00000014719)	CENPS (ENSOCUG00000017682)	CORT (ENSOCUG00000021685)	ENSOCUG00000036902	PEX14 (ENSOCUG00000015036)	CASZ1 (ENSOCUG00000026310)	ENSOCUG00000030659	MTFR1L (ENSOCUG00000002456)	ENSOCUG00000039454 #22	AUNIP (ENSOCUG00000002458)	PAQR7 (ENSOCUG00000037257)	ENSOCUG00000006493	PAFAH2 (ENSOCUG00000012696)	EXTL1 (ENSOCUG00000006878)	SLC30A2 (ENSOCUG00000006885)	TRIM63 (ENSOCUG00000013564)	PDIK1L (ENSOCUG00000010956)	FAM110D (ENSOCUG00000039461)	ENSOCUG00000033604	ZNF593 (ENSOCUG00000013999)	ZNF593OS (ENSOCUG00000038218)	CNKSR1 (ENSOCUG00000023717)	CATSPER4 (ENSOCUG00000002929)	CEP85 (ENSOCUG00000016916)
Pika	MODERN SPECIES	5491																ENSOPRG00000007175 #22
Tree shrew	MODERN SPECIES	71																CCNE1 (ENSTBEG00000004028) #22	URI1 (ENSTBEG00000004897) #23
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000156041	ENSGT00390000005105	ENSGT00940000154688.b	ENSGT00990000204193	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000156041	ENSGT00390000005105	ENSGT00940000154688.b	ENSGT00990000204193	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00390000013367	ENSGT00940000156041	ENSGT00990000204193	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35
Suina	ANCESTRAL SPECIES	2	ENSGT00950000183118.B	ENSGT00390000013367	ENSGT00940000156041	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Pig	DUPLICATION
Pig	MODERN SPECIES	14	NETO2 (ENSSSCG00000026318)	DNAJA2 (ENSSSCG00000002846)	GPT2 (ENSSSCG00000002847)	C16orf87 (ENSSSCG00000022333)	MYLK3 (ENSSSCG00000036874)	ORC6 (ENSSSCG00000024443)	VPS35 (ENSSSCG00000026239)	SHCBP1 (ENSSSCG00000002849)	ENSSSCG00000002850	ENSSSCG00000038906	UQCRFS1 (ENSSSCG00000027085) #17	VSTM2B (ENSSSCG00000023921) #18	POP4 (ENSSSCG00000002854) #19	PLEKHF1 (ENSSSCG00000002852) #20	C19orf12 (ENSSSCG00000032153) #21	ENSSSCG00000002855 #22	URI1 (ENSSSCG00000025912) #23	ZNF536 (ENSSSCG00000029234) #24	TSHZ3 (ENSSSCG00000025214) #25	ZNF507 (ENSSSCG00000025139) #26	DPY19L3 (ENSSSCG00000022521) #27	PDCD5 (ENSSSCG00000002860) #28	ANKRD27 (ENSSSCG00000002859) #29	RGS9BP (ENSSSCG00000051830) #30	NUDT19 (ENSSSCG00000036294) #31	TDRD12 (ENSSSCG00000002857) #32	SLC7A9 (ENSSSCG00000022948) #33	CEP89 (ENSSSCG00000025152) #34	FAAP24 (ENSSSCG00000040905) #35	RHPN2 (ENSSSCG00000022312) #36	GPATCH1 (ENSSSCG00000002865) #37
Pig	MODERN SPECIES	10	PDE3B (ENSSSCG00000013388)	PSMA1 (ENSSSCG00000013391)	COPB1 (ENSSSCG00000013392)	ENSSSCG00000033786	SPON1 (ENSSSCG00000013393)	FAR1 (ENSSSCG00000021170)	PTH (ENSSSCG00000013394)	BTBD10 (ENSSSCG00000013395)	BMAL1 (ENSSSCG00000013397)	RASSF10 (ENSSSCG00000022060)	TEAD1 (ENSSSCG00000013399)	PARVA (ENSSSCG00000028827)	ENSSSCG00000031706	DKK3 (ENSSSCG00000013401)	USP47 (ENSSSCG00000013402)	ENSSSCG00000031143 #22	GALNT18 (ENSSSCG00000013403)	ZBED5 (ENSSSCG00000033411)	EIF4G2 (ENSSSCG00000013405)	CTR9 (ENSSSCG00000013406)	IRAG1 (ENSSSCG00000020720)	LYVE1 (ENSSSCG00000029886)	RNF141 (ENSSSCG00000036546)	AMPD3 (ENSSSCG00000022492)	ADM (ENSSSCG00000013408)	SBF2 (ENSSSCG00000013409)	ENSSSCG00000024330	SWAP70 (ENSSSCG00000013410)	ENSSSCG00000043004	ENSSSCG00000051990	ENSSSCG00000022191
Chacoan peccary	MODERN SPECIES	104	ITFG1 (ENSCWAG00000002149)	NETO2 (ENSCWAG00000002107)	DNAJA2 (ENSCWAG00000002085)	GPT2 (ENSCWAG00000002047)	ENSCWAG00000002014	ENSCWAG00000001992	MYLK3 (ENSCWAG00000001954)	ORC6 (ENSCWAG00000001931)	VPS35 (ENSCWAG00000001902)	SHCBP1 (ENSCWAG00000001888)	UQCRFS1 (ENSCWAG00000001869) #17	VSTM2B (ENSCWAG00000001853) #18	POP4 (ENSCWAG00000001837) #19	PLEKHF1 (ENSCWAG00000001825) #20	C19orf12 (ENSCWAG00000001799) #21	CCNE1 (ENSCWAG00000001690) #22	URI1 (ENSCWAG00000001670) #23	ZNF536 (ENSCWAG00000001663) #24	ENSCWAG00000001653	TSHZ3 (ENSCWAG00000001647) #25	ZNF507 (ENSCWAG00000001636) #26	ENSCWAG00000001629	DPY19L3 (ENSCWAG00000001605) #27	ENSCWAG00000001578 #28	ANKRD27 (ENSCWAG00000001538) #29	RGS9BP (ENSCWAG00000001525) #30	NUDT19 (ENSCWAG00000001513) #31	ENSCWAG00000001506	ENSCWAG00000001495	ENSCWAG00000001479	TDRD12 (ENSCWAG00000001230) #32
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00390000013367	ENSGT00940000156041	ENSGT00940000154688.b	ENSGT00990000204193	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000159578	ENSGT00950000183118.B	ENSGT00390000013367	ENSGT00940000156041	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Alpaca	MODERN SPECIES	6051																CCNE1 (ENSVPAG00000001390) #22
Arabian camel	MODERN SPECIES	35	PHKB (ENSCDRG00005022272)	ITFG1 (ENSCDRG00005022204)	NETO2 (ENSCDRG00005022162)	DNAJA2 (ENSCDRG00005022140)	GPT2 (ENSCDRG00005022050)	ENSCDRG00005022000	MYLK3 (ENSCDRG00005021954)	ORC6 (ENSCDRG00005021936)	VPS35 (ENSCDRG00005021932)	SHCBP1 (ENSCDRG00005021912)	ENSCDRG00005021909	UQCRFS1 (ENSCDRG00005021891) #17	POP4 (ENSCDRG00005021850) #19	PLEKHF1 (ENSCDRG00005021848) #20	C19orf12 (ENSCDRG00005021821) #21	CCNE1 (ENSCDRG00005021725) #22	URI1 (ENSCDRG00005021639) #23	ZNF536 (ENSCDRG00005021564) #24	TSHZ3 (ENSCDRG00005021492) #25	ENSCDRG00005021461	ZNF507 (ENSCDRG00005021348) #26	DPY19L3 (ENSCDRG00005021111) #27	ENSCDRG00005020847 #28	ANKRD27 (ENSCDRG00005020575) #29	RGS9BP (ENSCDRG00005020448) #30	NUDT19 (ENSCDRG00005020362) #31	TDRD12 (ENSCDRG00005020226) #32	SLC7A9 (ENSCDRG00005019910) #33	CEP89 (ENSCDRG00005019493) #34	FAAP24 (ENSCDRG00005019258) #35	RHPN2 (ENSCDRG00005019052) #36
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00390000013367	ENSGT00940000156041	ENSGT00940000154688.b	ENSGT00990000204193	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35
Cetacea	ANCESTRAL SPECIES	6	ENSGT00390000013367	ENSGT00940000156041	ENSGT00990000204193	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00760000120431	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085.sb.b #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000156041.h.a	ENSGT00990000204193	ENSGT00940000156041.g	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085.sb.b #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000156041.h.a	ENSGT00990000204193	ENSGT00940000156041.g	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370.i	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085.sb.b #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000156041.h.a	ENSGT00990000204193	ENSGT00940000156041.g	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370.i	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085.sb.b #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000156041.h.a	ENSGT00990000204193	ENSGT00940000156041.g	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370.i	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085.tb #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Beluga whale	MODERN SPECIES	14												UQCRFS1 (ENSDLEG00000001783) #17	VSTM2B (ENSDLEG00000001777) #18	POP4 (ENSDLEG00000001765) #19	CUNH19orf12 (ENSDLEG00000001761) #21	CCNE1 (ENSDLEG00000001752) #22	URI1 (ENSDLEG00000001739) #23	ZNF536 (ENSDLEG00000001724) #24	TSHZ3 (ENSDLEG00000001711) #25	ZNF507 (ENSDLEG00000001695) #26	DPY19L3 (ENSDLEG00000001647) #27	ENSDLEG00000001621 #28	ANKRD27 (ENSDLEG00000001495) #29	RGS9BP (ENSDLEG00000001457) #30	NUDT19 (ENSDLEG00000001447) #31	TDRD12 (ENSDLEG00000001176) #32	ENSDLEG00000001110	SLC7A9 (ENSDLEG00000001083) #33	ENSDLEG00000001076	CEP89 (ENSDLEG00000001045) #34	FAAP24 (ENSDLEG00000001028) #35
Narwhal	MODERN SPECIES	296	ENSMMNG00015000546	ITFG1 (ENSMMNG00015000673)	NETO2 (ENSMMNG00015000741)	DNAJA2 (ENSMMNG00015000782)	GPT2 (ENSMMNG00015000815)	C16orf87 (ENSMMNG00015000869)	MYLK3 (ENSMMNG00015000932)	ENSMMNG00015001005	VPS35 (ENSMMNG00015001063)	SHCBP1 (ENSMMNG00015001117)	UQCRFS1 (ENSMMNG00015001165) #17	VSTM2B (ENSMMNG00015001182) #18	POP4 (ENSMMNG00015001208) #19	PLEKHF1 (ENSMMNG00015001239) #20	C19orf12 (ENSMMNG00015001260) #21	CCNE1 (ENSMMNG00015001304) #22	URI1 (ENSMMNG00015001385) #23	ZNF536 (ENSMMNG00015001436) #24	TSHZ3 (ENSMMNG00015001458) #25	ZNF507 (ENSMMNG00015001504) #26	DPY19L3 (ENSMMNG00015001544) #27	PDCD5 (ENSMMNG00015001602) #28	ANKRD27 (ENSMMNG00015001650) #29	RGS9BP (ENSMMNG00015001697) #30	NUDT19 (ENSMMNG00015001712) #31	TDRD12 (ENSMMNG00015001768) #32	SLC7A9 (ENSMMNG00015001863) #33	ENSMMNG00015001894	CEP89 (ENSMMNG00015001947) #34	ENSMMNG00015002056	FAAP24 (ENSMMNG00015002077) #35
Vaquita	MODERN SPECIES	10	ITFG1 (ENSPSNG00000021338)	NETO2 (ENSPSNG00000021319)	ENSPSNG00000021303	DNAJA2 (ENSPSNG00000021284)	GPT2 (ENSPSNG00000021261)	C16orf87 (ENSPSNG00000021234)	MYLK3 (ENSPSNG00000021168)	ENSPSNG00000021135	VPS35 (ENSPSNG00000021085)	SHCBP1 (ENSPSNG00000021057)	UQCRFS1 (ENSPSNG00000021044) #17	VSTM2B (ENSPSNG00000021024) #18	POP4 (ENSPSNG00000020993) #19	PLEKHF1 (ENSPSNG00000020975) #20	C19orf12 (ENSPSNG00000020941) #21	CCNE1 (ENSPSNG00000020886) #22	URI1 (ENSPSNG00000020804) #23	ZNF536 (ENSPSNG00000020763) #24	TSHZ3 (ENSPSNG00000020733) #25	ZNF507 (ENSPSNG00000020685) #26	DPY19L3 (ENSPSNG00000020640) #27	ENSPSNG00000020582 #28	ANKRD27 (ENSPSNG00000020465) #29	RGS9BP (ENSPSNG00000020384) #30	NUDT19 (ENSPSNG00000020373) #31	TDRD12 (ENSPSNG00000020182) #32	SLC7A9 (ENSPSNG00000020070) #33	ENSPSNG00000020046	CEP89 (ENSPSNG00000019994) #34	FAAP24 (ENSPSNG00000019954) #35	RHPN2 (ENSPSNG00000019928) #36
Dolphin	MODERN SPECIES	317															C19orf12 (ENSTTRG00000008167) #21	CCNE1 (ENSTTRG00000008174) #22	URI1 (ENSTTRG00000008180) #23
Sperm whale	MODERN SPECIES	8	ENSPCTG00005009015	ENSPCTG00005008968	DNAJA2 (ENSPCTG00005018810)	GPT2 (ENSPCTG00005018753)	C16orf87 (ENSPCTG00005018678)	ORC6 (ENSPCTG00005018581)	MYLK3 (ENSPCTG00005018229)	SHCBP1 (ENSPCTG00005018139)	ENSPCTG00005018116	ENSPCTG00005018104	ENSPCTG00005017977 #17	VSTM2B (ENSPCTG00005017910) #18	POP4 (ENSPCTG00005017854) #19	PLEKHF1 (ENSPCTG00005017836) #20	C17H19orf12 (ENSPCTG00005017766) #21	CCNE1 (ENSPCTG00005017668) #22	ENSPCTG00005017597	URI1 (ENSPCTG00005017313) #23	ZNF536 (ENSPCTG00005017245) #24	TSHZ3 (ENSPCTG00005017204) #25	ENSPCTG00005017174	ZNF507 (ENSPCTG00005017138) #26	DPY19L3 (ENSPCTG00005017005) #27	PDCD5 (ENSPCTG00005016856) #28	ANKRD27 (ENSPCTG00005016618) #29	RGS9BP (ENSPCTG00005016564) #30	NUDT19 (ENSPCTG00005016540) #31	TDRD12 (ENSPCTG00005015644) #32	SLC7A9 (ENSPCTG00005015420) #33	CEP89 (ENSPCTG00005015339) #34	FAAP24 (ENSPCTG00005015251) #35
Blue whale	MODERN SPECIES	10	NETO2 (ENSBMSG00010019202)	ENSBMSG00010019175	DNAJA2 (ENSBMSG00010019149)	GPT2 (ENSBMSG00010019103)	C16orf87 (ENSBMSG00010019068)	MYLK3 (ENSBMSG00010018990)	ORC6 (ENSBMSG00010018899)	VPS35 (ENSBMSG00010018847)	ENSBMSG00010018825	SHCBP1 (ENSBMSG00010018800)	UQCRFS1 (ENSBMSG00010018781) #17	VSTM2B (ENSBMSG00010018756) #18	POP4 (ENSBMSG00010018728) #19	PLEKHF1 (ENSBMSG00010018715) #20	ENSBMSG00010018694 #21	CCNE1 (ENSBMSG00010018593) #22	URI1 (ENSBMSG00010018529) #23	ZNF536 (ENSBMSG00010018499) #24	TSHZ3 (ENSBMSG00010018482) #25	ENSBMSG00010018457	ZNF507 (ENSBMSG00010018417) #26	DPY19L3 (ENSBMSG00010018255) #27	ENSBMSG00010018205 #28	ANKRD27 (ENSBMSG00010018041) #29	RGS9BP (ENSBMSG00010017993) #30	NUDT19 (ENSBMSG00010017985) #31	ENSBMSG00010017925	SLC7A9 (ENSBMSG00010017871) #33	CEP89 (ENSBMSG00010017830) #34	FAAP24 (ENSBMSG00010017784) #35	RHPN2 (ENSBMSG00010017698) #36
Pecora	ANCESTRAL SPECIES	4	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36
Percora_a	ANCESTRAL SPECIES	4	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000154509.y.b.a.a.b
Bovidae	ANCESTRAL SPECIES	4	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00940000157868.c	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35
Caprinae	ANCESTRAL SPECIES	4	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00940000157868.c	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35
Goat	MODERN SPECIES	9	AP1G1 (ENSCHIG00000007110)	PHLPP2 (ENSCHIG00000021763)	ENSCHIG00000025747	TAT (ENSCHIG00000018390)	CHST4 (ENSCHIG00000007788)	ZNF19 (ENSCHIG00000015453)	ENSCHIG00000016867	TLE7 (ENSCHIG00000016108)	CALB2 (ENSCHIG00000019148)	CMTR2 (ENSCHIG00000008526)	ENSCHIG00000013255	HYDIN (ENSCHIG00000026411)	POP4 (ENSCHIG00000016743) #19	PLEKHF1 (ENSCHIG00000005768) #20	C19orf12 (ENSCHIG00000023412) #21	CCNE1 (ENSCHIG00000024742) #22	URI1 (ENSCHIG00000011466) #23	ZNF536 (ENSCHIG00000015719) #24	TSHZ3 (ENSCHIG00000015004) #25	ENSCHIG00000020296	ZNF507 (ENSCHIG00000026183) #26	DPY19L3 (ENSCHIG00000021524) #27	PDCD5 (ENSCHIG00000006484) #28	ANKRD27 (ENSCHIG00000017376) #29	RGS9BP (ENSCHIG00000007331) #30	NUDT19 (ENSCHIG00000021537) #31	CEP89 (ENSCHIG00000014142) #34	FAAP24 (ENSCHIG00000021119) #35	RHPN2 (ENSCHIG00000010158) #36	ENSCHIG00000023853	GPATCH1 (ENSCHIG00000019626) #37
Rambouillet Sheep	MODERN SPECIES	5	ATXN1L (ENSOARG00020014127)	AP1G1 (ENSOARG00020014154)	PHLPP2 (ENSOARG00020014444)	ENSOARG00020014620	TAT (ENSOARG00020014764)	CHST4 (ENSOARG00020014903)	ZNF19 (ENSOARG00020014924)	ZNF23 (ENSOARG00020015007)	TLE7 (ENSOARG00020015063)	CALB2 (ENSOARG00020015182)	CMTR2 (ENSOARG00020015255)	ENSOARG00020015294	POP4 (ENSOARG00020015812) #19	PLEKHF1 (ENSOARG00020015872) #20	C19orf12 (ENSOARG00020015895) #21	CCNE1 (ENSOARG00020016006) #22	URI1 (ENSOARG00020016490) #23	ZNF536 (ENSOARG00020016711) #24	TSHZ3 (ENSOARG00020016853) #25	ENSOARG00020016916	ZNF507 (ENSOARG00020016947) #26	DPY19L3 (ENSOARG00020017008) #27	PDCD5 (ENSOARG00020017391) #28	ANKRD27 (ENSOARG00020017656) #29	TLCD3A (ENSOARG00020018181)	RGS9BP (ENSOARG00020018201) #30	ENSOARG00020018245	NUDT19 (ENSOARG00020018292) #31	TDRD12 (ENSOARG00020010036) #32	SLC7A9 (ENSOARG00020010886) #33	CEP89 (ENSOARG00020010986) #34
Bovinae	ANCESTRAL SPECIES	3	ENSGT00950000183198.c.a.b.a.a	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00940000157868.c	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35
Bos	ANCESTRAL SPECIES	4	ENSGT00950000183198.c.a.b.a.a	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00940000157868.c	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35
Bos_a	ANCESTRAL SPECIES	1	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000154509.y.b.a.a.b
Domestic yak	MODERN SPECIES	12	PHLPP2 (ENSBGRG00000019231)	ENSBGRG00000019121	ENSBGRG00000019102	TAT (ENSBGRG00000019057)	CHST4 (ENSBGRG00000019045)	ENSBGRG00000019020	ZNF19 (ENSBGRG00000018945)	ZNF23 (ENSBGRG00000018887)	TLE7 (ENSBGRG00000018847)	CALB2 (ENSBGRG00000018597)	CMTR2 (ENSBGRG00000018577)	ENSBGRG00000018230	POP4 (ENSBGRG00000018144) #19	PLEKHF1 (ENSBGRG00000018110) #20	C19orf12 (ENSBGRG00000018064) #21	CCNE1 (ENSBGRG00000017848) #22	URI1 (ENSBGRG00000017617) #23	ZNF536 (ENSBGRG00000017429) #24	ENSBGRG00000017388	ENSBGRG00000017301 #25	ZNF507 (ENSBGRG00000017072) #26	DPY19L3 (ENSBGRG00000016779) #27	PDCD5 (ENSBGRG00000016600) #28	ANKRD27 (ENSBGRG00000015781) #29	RGS9BP (ENSBGRG00000015694) #30	ENSBGRG00000015627	NUDT19 (ENSBGRG00000015404) #31	TDRD12 (ENSBGRG00000014365) #32	SLC7A9 (ENSBGRG00000014100) #33	CEP89 (ENSBGRG00000013711) #34	FAAP24 (ENSBGRG00000013456) #35
Wild yak	MODERN SPECIES	1105	AP1G1 (ENSBMUG00000006145)	ENSBMUG00000006155	PHLPP2 (ENSBMUG00000006177)	ENSBMUG00000006191	TAT (ENSBMUG00000006211)	CHST4 (ENSBMUG00000006220)	ZNF19 (ENSBMUG00000006233)	ZNF23 (ENSBMUG00000006245)	TLE7 (ENSBMUG00000006254)	CALB2 (ENSBMUG00000006279)	CMTR2 (ENSBMUG00000006290)	ENSBMUG00000006335	POP4 (ENSBMUG00000006454) #19	PLEKHF1 (ENSBMUG00000006460) #20	C19orf12 (ENSBMUG00000006484) #21	CCNE1 (ENSBMUG00000006541) #22	URI1 (ENSBMUG00000006595) #23
Bos_b	ANCESTRAL SPECIES		ENSGT00950000183198.c.a.b.a.a	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00940000157868.c	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00950000186085	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35
Hybrid Bos Indicus	MODERN SPECIES	9	AP1G1 (ENSBIXG00005026699)	PHLPP2 (ENSBIXG00005026802)	ENSBIXG00005026870	TAT (ENSBIXG00005026937)	CHST4 (ENSBIXG00005026947)	ZNF19 (ENSBIXG00005026993)	ZNF23 (ENSBIXG00005004631)	TLE7 (ENSBIXG00005027053)	CALB2 (ENSBIXG00005027092)	CMTR2 (ENSBIXG00005027123)	ENSBIXG00005004688	ENSBIXG00005027467	POP4 (ENSBIXG00005027514) #19	PLEKHF1 (ENSBIXG00005027531) #20	C19orf12 (ENSBIXG00005027595) #21	CCNE1 (ENSBIXG00005027655) #22	URI1 (ENSBIXG00005027711) #23	ZNF536 (ENSBIXG00005004770) #24	TSHZ3 (ENSBIXG00005027810) #25	ENSBIXG00005027900	ZNF507 (ENSBIXG00005027929) #26	DPY19L3 (ENSBIXG00005028026) #27	ENSBIXG00005004831	ANKRD27 (ENSBIXG00005028194) #29	RGS9BP (ENSBIXG00005028222) #30	ENSBIXG00005028232	TDRD12 (ENSBIXG00005028317) #32	SLC7A9 (ENSBIXG00005004880) #33	CEP89 (ENSBIXG00005028440) #34	FAAP24 (ENSBIXG00005002469) #35	ENSBIXG00005028497
Cow	MODERN SPECIES	9	ATXN1L (ENSBTAG00000046255)	ENSBTAG00000047787	AP1G1 (ENSBTAG00000002769)	PHLPP2 (ENSBTAG00000007545)	MARVELD3 (ENSBTAG00000007544)	TAT (ENSBTAG00000002214)	CHST4 (ENSBTAG00000016968)	ZNF19 (ENSBTAG00000032018)	ZNF23 (ENSBTAG00000050281)	CALB2 (ENSBTAG00000001075)	CMTR2 (ENSBTAG00000047367)	ENSBTAG00000051512	POP4 (ENSBTAG00000002223) #19	PLEKHF1 (ENSBTAG00000008625) #20	C18H19orf12 (ENSBTAG00000020434) #21	CCNE1 (ENSBTAG00000004735) #22	URI1 (ENSBTAG00000007559) #23	ZNF536 (ENSBTAG00000007262) #24	TSHZ3 (ENSBTAG00000002687) #25	ZNF507 (ENSBTAG00000014123) #26	DPY19L3 (ENSBTAG00000015165) #27	PDCD5 (ENSBTAG00000009304) #28	ANKRD27 (ENSBTAG00000009305) #29	RGS9BP (ENSBTAG00000039441) #30	NUDT19 (ENSBTAG00000023614) #31	ENSBTAG00000049809	TDRD12 (ENSBTAG00000019266) #32	SLC7A9 (ENSBTAG00000013338) #33	CEP89 (ENSBTAG00000004864) #34	FAAP24 (ENSBTAG00000010403) #35	RHPN2 (ENSBTAG00000003089) #36
American bison	MODERN SPECIES	3211	ENSBBBG00000017395	AP1G1 (ENSBBBG00000017532)	PHLPP2 (ENSBBBG00000017628)	ENSBBBG00000017644	TAT (ENSBBBG00000017662)	CHST4 (ENSBBBG00000017670)	ZNF19 (ENSBBBG00000017689)	ZNF23 (ENSBBBG00000017702)	TLE7 (ENSBBBG00000017714)	CALB2 (ENSBBBG00000017758)	CMTR2 (ENSBBBG00000004380)	ENSBBBG00000017818	POP4 (ENSBBBG00000017837) #19	PLEKHF1 (ENSBBBG00000008008) #20	C19orf12 (ENSBBBG00000017853) #21	CCNE1 (ENSBBBG00000017896) #22	URI1 (ENSBBBG00000017939) #23	ZNF536 (ENSBBBG00000017947) #24	TSHZ3 (ENSBBBG00000004412) #25
Siberian musk deer	MODERN SPECIES	125	ATXN1L (ENSMMSG00000002787)	AP1G1 (ENSMMSG00000002693)	PHLPP2 (ENSMMSG00000002614)	ENSMMSG00000002572	TAT (ENSMMSG00000002530)	CHST4 (ENSMMSG00000002516)	ZNF19 (ENSMMSG00000002502)	ZNF23 (ENSMMSG00000002487)	TLE7 (ENSMMSG00000002450)	CALB2 (ENSMMSG00000002376)	CMTR2 (ENSMMSG00000002352)	ENSMMSG00000002328	HYDIN (ENSMMSG00000002047)	POP4 (ENSMMSG00000001970) #19	C19orf12 (ENSMMSG00000001952) #21	CCNE1 (ENSMMSG00000001931) #22	URI1 (ENSMMSG00000001916) #23	ZNF536 (ENSMMSG00000001908) #24	TSHZ3 (ENSMMSG00000001900) #25	ENSMMSG00000001891	ENSMMSG00000001861	ZNF507 (ENSMMSG00000001851) #26	DPY19L3 (ENSMMSG00000001821) #27	PDCD5 (ENSMMSG00000001787) #28	ANKRD27 (ENSMMSG00000001694) #29	RGS9BP (ENSMMSG00000001664) #30	NUDT19 (ENSMMSG00000001655) #31	TDRD12 (ENSMMSG00000001219) #32	SLC7A9 (ENSMMSG00000001076) #33	CEP89 (ENSMMSG00000001009) #34	FAAP24 (ENSMMSG00000000974) #35
Yarkand deer	MODERN SPECIES	27	ATXN1L (ENSCHYG00000023611)	AP1G1 (ENSCHYG00000023628)	PHLPP2 (ENSCHYG00000023784)	ENSCHYG00000023960	TAT (ENSCHYG00000024008)	ZNF19 (ENSCHYG00000024051)	ZNF23 (ENSCHYG00000024101)	TLE7 (ENSCHYG00000005818)	CALB2 (ENSCHYG00000005859)	CMTR2 (ENSCHYG00000005918)	ENSCHYG00000005945	ENSCHYG00000006005	ENSCHYG00000006027 #19	PLEKHF1 (ENSCHYG00000006065) #20	C19orf12 (ENSCHYG00000006082) #21	CCNE1 (ENSCHYG00000006119) #22	URI1 (ENSCHYG00000006211) #23	ENSCHYG00000006259	ZNF536 (ENSCHYG00000006308) #24	TSHZ3 (ENSCHYG00000006419) #25	ZNF507 (ENSCHYG00000006472) #26	DPY19L3 (ENSCHYG00000006514) #27	PDCD5 (ENSCHYG00000006657) #28	ANKRD27 (ENSCHYG00000006798) #29	RGS9BP (ENSCHYG00000007182) #30	NUDT19 (ENSCHYG00000007216) #31	TDRD12 (ENSCHYG00000007254) #32	SLC7A9 (ENSCHYG00000007447) #33	CEP89 (ENSCHYG00000007507) #34	FAAP24 (ENSCHYG00000007619) #35	RHPN2 (ENSCHYG00000007660) #36
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00390000013367	ENSGT00940000156041	ENSGT00990000204193	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413	ENSGT00390000009456 #35
Carnivora	ANCESTRAL SPECIES	2	ENSGT00390000013367	ENSGT00940000156041	ENSGT00990000204193	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413	ENSGT00390000009456 #35
Caniformia	ANCESTRAL SPECIES	1	ENSGT00390000013367	ENSGT00940000156041	ENSGT00990000204193	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413	ENSGT00390000009456 #35
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00950000183118.B	ENSGT00390000013367	ENSGT00940000156041	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014.d #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077.i #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Ursidae	ANCESTRAL SPECIES	8	ENSGT00950000183118.B	ENSGT00390000013367	ENSGT00940000156041	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014.d #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077.i #21	ENSGT00940000156256 #22	ENSGT00390000008610.a.b.a.a.a	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36
Ursus	ANCESTRAL SPECIES	198														ENSGT00390000009077.j.a.b #21	ENSGT00390000010067.h #19	ENSGT00940000156256 #22	ENSGT00390000008610.a.b.a.a.a	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36
Polar bear	MODERN SPECIES	155													ENSUMAG00000013469 #21	ENSUMAG00000013478 #21	ENSUMAG00000013482 #19	CCNE1 (ENSUMAG00000013484) #22	ENSUMAG00000013491	URI1 (ENSUMAG00000013495) #23	ZNF536 (ENSUMAG00000013502) #24	TSHZ3 (ENSUMAG00000013540) #25	ZNF507 (ENSUMAG00000013564) #26	DPY19L3 (ENSUMAG00000013572) #27	PDCD5 (ENSUMAG00000013611) #28	ANKRD27 (ENSUMAG00000013702) #29	TDRD12 (ENSUMAG00000014314) #32	SLC7A9 (ENSUMAG00000014340) #33	CEP89 (ENSUMAG00000014588) #34	FAAP24 (ENSUMAG00000014600) #35	RHPN2 (ENSUMAG00000014602) #36	GPATCH1 (ENSUMAG00000014645) #37	WDR88 (ENSUMAG00000014767)
American black bear	MODERN SPECIES	1369																CCNE1 (ENSUAMG00000007369) #22	ENSUAMG00000007373
Giant Panda	MODERN SPECIES	3	ITFG1 (ENSAMEG00000004849)	NETO2 (ENSAMEG00000004857)	DNAJA2 (ENSAMEG00000004874)	GPT2 (ENSAMEG00000004904)	C16orf87 (ENSAMEG00000000887)	MYLK3 (ENSAMEG00000000866)	ORC6 (ENSAMEG00000018347)	ENSAMEG00000018344	ENSAMEG00000018332	ENSAMEG00000018330 #17	VSTM2B (ENSAMEG00000027962) #18	ENSAMEG00000027559	ENSAMEG00000003172 #19	PLEKHF1 (ENSAMEG00000019032) #20	ENSAMEG00000030806 #21	CCNE1 (ENSAMEG00000009668) #22	ENSAMEG00000007309	URI1 (ENSAMEG00000009637) #23	ZNF536 (ENSAMEG00000009725) #24	TSHZ3 (ENSAMEG00000009733) #25	ZNF507 (ENSAMEG00000009742) #26	DPY19L3 (ENSAMEG00000009748) #27	PDCD5 (ENSAMEG00000009766) #28	ANKRD27 (ENSAMEG00000009784) #29	RGS9BP (ENSAMEG00000028432) #30	NUDT19 (ENSAMEG00000009842) #31	ENSAMEG00000009847	SLC7A9 (ENSAMEG00000015459) #33	CEP89 (ENSAMEG00000015514) #34	FAAP24 (ENSAMEG00000015524) #35	RHPN2 (ENSAMEG00000015528) #36
Mustelinae	ANCESTRAL SPECIES	49														ENSGT00940000160728 #20	ENSGT00390000009077.i #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
American mink	MODERN SPECIES	95												ENSNVIG00000020109 #21	ENSNVIG00000020103 #19	PLEKHF1 (ENSNVIG00000020098) #20	ENSNVIG00000020090 #21	CCNE1 (ENSNVIG00000020059) #22	URI1 (ENSNVIG00000020030) #23	ZNF536 (ENSNVIG00000020006) #24	TSHZ3 (ENSNVIG00000019995) #25	ZNF507 (ENSNVIG00000019975) #26	D19L3 (ENSNVIG00000019918) #27	PDCD5 (ENSNVIG00000019867) #28	ANKRD27 (ENSNVIG00000019825) #29	RGS9BP (ENSNVIG00000019820) #30	NUDT19 (ENSNVIG00000019811) #31	ENSNVIG00000019776	SLC7A9 (ENSNVIG00000019724) #33	CEP89 (ENSNVIG00000019683) #34	FAAP24 (ENSNVIG00000019668) #35	RHPN2 (ENSNVIG00000019645) #36	GPATCH1 (ENSNVIG00000019604) #37
Ferret	MODERN SPECIES	272			ENSMPUG00000008163	ENSMPUG00000008156	ENSMPUG00000008155	VSTM2B (ENSMPUG00000008146) #18	ENSMPUG00000008141 #19	ENSMPUG00000008129 #21	ENSMPUG00000008063 #19	ENSMPUG00000008056 #21	ENSMPUG00000008050	ENSMPUG00000008041 #19	ENSMPUG00000008033	PLEKHF1 (ENSMPUG00000018950) #20	ENSMPUG00000008025 #21	CCNE1 (ENSMPUG00000008012) #22	ENSMPUG00000008009	URI1 (ENSMPUG00000008002) #23	ENSMPUG00000007994	ZNF536 (ENSMPUG00000007989) #24	TSHZ3 (ENSMPUG00000007986) #25	ZNF507 (ENSMPUG00000007979) #26	DPY19L3 (ENSMPUG00000007958) #27	PDCD5 (ENSMPUG00000007931) #28	ANKRD27 (ENSMPUG00000007821) #29	RGS9BP (ENSMPUG00000018943) #30	NUDT19 (ENSMPUG00000007814) #31	TDRD12 (ENSMPUG00000007791) #32	SLC7A9 (ENSMPUG00000007696) #33	CEP89 (ENSMPUG00000007682) #34	FAAP24 (ENSMPUG00000007678) #35
Canidae	ANCESTRAL SPECIES	5											ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413	ENSGT00390000009456 #35
Canis_lupus	ANCESTRAL SPECIES												ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00950000186085	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00940000169413	ENSGT00390000009456 #35
Dog	MODERN SPECIES												UQCRFS1 (ENSCAFG00845001274) #17	ENSCAFG00845001253 #18	POP4 (ENSCAFG00845001208) #19	PLEKHF1 (ENSCAFG00845001176) #20	C19orf12 (ENSCAFG00845001166) #21	CCNE1 (ENSCAFG00845001129) #22	URI1 (ENSCAFG00845001063) #23	ZNF536 (ENSCAFG00845000976) #24	TSHZ3 (ENSCAFG00845000908) #25	ZNF507 (ENSCAFG00845000880) #26	DPY19L3 (ENSCAFG00845000789) #27	ENSCAFG00845000680 #28	ANKRD27 (ENSCAFG00845000589) #29	RGS9BP (ENSCAFG00845000547) #30	ENSCAFG00845000530	NUDT19 (ENSCAFG00845000516) #31	TDRD12 (ENSCAFG00845000471) #32	SLC7A9 (ENSCAFG00845000428) #33	CEP89 (ENSCAFG00845000371) #34	FAAP24 (ENSCAFG00845000331) #35	RHPN2 (ENSCAFG00845000287) #36
Dingo	MODERN SPECIES	125										ENSCAFG00020019987	UQCRFS1 (ENSCAFG00020019969) #17	VSTM2B (ENSCAFG00020019965) #18	ENSCAFG00020019964 #19	PLEKHF1 (ENSCAFG00020019960) #20	C19orf12 (ENSCAFG00020019957) #21	CCNE1 (ENSCAFG00020019952) #22	ENSCAFG00020019950	URI1 (ENSCAFG00020019949) #23	ENSCAFG00020019927 #24	TSHZ3 (ENSCAFG00020019912) #25	ENSCAFG00020019907	ZNF507 (ENSCAFG00020019878) #26	DPY19L3 (ENSCAFG00020019865) #27	ENSCAFG00020019841 #28	ANKRD27 (ENSCAFG00020019831) #29	RGS9BP (ENSCAFG00020019830) #30	NUDT19 (ENSCAFG00020019828) #31	TDRD12 (ENSCAFG00020019790) #32	SLC7A9 (ENSCAFG00020019778) #33	CEP89 (ENSCAFG00020019752) #34	ENSCAFG00020019747
Red fox	MODERN SPECIES	80												ENSVVUG00000016882	ENSVVUG00000016876 #19	PLEKHF1 (ENSVVUG00000016871) #20	CUNH19orf12 (ENSVVUG00000016868) #21	CCNE1 (ENSVVUG00000016850) #22	URI1 (ENSVVUG00000016834) #23	ZNF536 (ENSVVUG00000016804) #24	TSHZ3 (ENSVVUG00000016783) #25	ZNF507 (ENSVVUG00000016742) #26	DPY19L3 (ENSVVUG00000016714) #27	ENSVVUG00000016712 #28	ANKRD27 (ENSVVUG00000016689) #29	ENSVVUG00000016685 #30	TDRD12 (ENSVVUG00000016637) #32	SLC7A9 (ENSVVUG00000016626) #33	CEP89 (ENSVVUG00000016607) #34	FAAP24 (ENSVVUG00000016604) #35	RHPN2 (ENSVVUG00000016587) #36	GPATCH1 (ENSVVUG00000016572) #37	WDR88 (ENSVVUG00000016568)
Felidae	ANCESTRAL SPECIES	7	ENSGT00390000013367	ENSGT00940000156041	ENSGT00990000204193	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153609.b.y.b	ENSGT00940000153837.a.b #36
Panthera	ANCESTRAL SPECIES	10	ENSGT00390000013367	ENSGT00940000156041	ENSGT00990000204193	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014.b #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153609.b.y.b	ENSGT00940000153837.a.b #36
Tiger	MODERN SPECIES	547	ABCC11 (ENSPTIG00000016229)	ABCC12 (ENSPTIG00000019872)	PHKB (ENSPTIG00000021444)	ITFG1 (ENSPTIG00000007464)	NETO2 (ENSPTIG00000009224)	DNAJA2 (ENSPTIG00000011350)	GPT2 (ENSPTIG00000011669)	C16orf87 (ENSPTIG00000012961)	ENSPTIG00000013190	ORC6 (ENSPTIG00000013837)	VPS35 (ENSPTIG00000014402)	SHCBP1 (ENSPTIG00000015014)	UQCRFS1 (ENSPTIG00000016425) #17	POP4 (ENSPTIG00000016598) #19	C19orf12 (ENSPTIG00000017039) #21	CCNE1 (ENSPTIG00000018249) #22	URI1 (ENSPTIG00000020114) #23	ZNF536 (ENSPTIG00000020883) #24	TSHZ3 (ENSPTIG00000000029) #25	ZNF507 (ENSPTIG00000000684) #26	DPY19L3 (ENSPTIG00000005956) #27	PDCD5 (ENSPTIG00000007586) #28	ANKRD27 (ENSPTIG00000008026) #29	ENSPTIG00000011285	SLC7A9 (ENSPTIG00000011909) #33	CEP89 (ENSPTIG00000015712) #34	ENSPTIG00000016120	FAAP24 (ENSPTIG00000017907) #35	RHPN2 (ENSPTIG00000018334) #36	GPATCH1 (ENSPTIG00000019649) #37	WDR88 (ENSPTIG00000020346)
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00390000013367	ENSGT00940000156041	ENSGT00990000204193	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014.b #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153609.b.y.b	ENSGT00940000153837.a.b #36
leopard	MODERN SPECIES	93											ENSPPRG00000011021 #17	VSTM2B (ENSPPRG00000010886) #18	POP4 (ENSPPRG00000010502) #19	PLEKHF1 (ENSPPRG00000014328) #20	C19orf12 (ENSPPRG00000009538) #21	CCNE1 (ENSPPRG00000008532) #22	URI1 (ENSPPRG00000007736) #23	ZNF536 (ENSPPRG00000007049) #24	TSHZ3 (ENSPPRG00000006783) #25	ZNF507 (ENSPPRG00000006540) #26	ENSPPRG00000006120	DPY19L3 (ENSPPRG00000005613) #27	PDCD5 (ENSPPRG00000004706) #28	ANKRD27 (ENSPPRG00000003812) #29	RGS9BP (ENSPPRG00000014110) #30	NUDT19 (ENSPPRG00000002593) #31	TDRD12 (ENSPPRG00000002389) #32	SLC7A9 (ENSPPRG00000000104) #33	CEP89 (ENSPPRG00000022947) #34	ENSPPRG00000023275	FAAP24 (ENSPPRG00000023535) #35
lion	MODERN SPECIES	15	NETO2 (ENSPLOG00000012794)	ENSPLOG00000012756	DNAJA2 (ENSPLOG00000012673)	GPT2 (ENSPLOG00000012599)	ENSPLOG00000012572	C16orf87 (ENSPLOG00000012519)	MYLK3 (ENSPLOG00000012295)	ORC6 (ENSPLOG00000012223)	VPS35 (ENSPLOG00000012152)	SHCBP1 (ENSPLOG00000012099)	UQCRFS1 (ENSPLOG00000012069) #17	VSTM2B (ENSPLOG00000012006) #18	POP4 (ENSPLOG00000011961) #19	PLEKHF1 (ENSPLOG00000011934) #20	C19orf12 (ENSPLOG00000011863) #21	CCNE1 (ENSPLOG00000011784) #22	URI1 (ENSPLOG00000011692) #23	ZNF536 (ENSPLOG00000011645) #24	TSHZ3 (ENSPLOG00000011553) #25	ZNF507 (ENSPLOG00000011521) #26	DPY19L3 (ENSPLOG00000011402) #27	PDCD5 (ENSPLOG00000011297) #28	ANKRD27 (ENSPLOG00000011124) #29	RGS9BP (ENSPLOG00000011038) #30	NUDT19 (ENSPLOG00000011007) #31	TDRD12 (ENSPLOG00000010712) #32	SLC7A9 (ENSPLOG00000010593) #33	ENSPLOG00000010558	CEP89 (ENSPLOG00000010392) #34	FAAP24 (ENSPLOG00000010325) #35	ENSPLOG00000010286
Cat	MODERN SPECIES	246	NETO2 (ENSFCAG00000044763)	ENSFCAG00000052656	DNAJA2 (ENSFCAG00000026439)	GPT2 (ENSFCAG00000001642)	ENSFCAG00000038831	ENSFCAG00000042208	MYLK3 (ENSFCAG00000001388)	ORC6 (ENSFCAG00000024275)	VPS35 (ENSFCAG00000001383)	SHCBP1 (ENSFCAG00000011798)	UQCRFS1 (ENSFCAG00000027292) #17	VSTM2B (ENSFCAG00000011103) #18	POP4 (ENSFCAG00000001619) #19	PLEKHF1 (ENSFCAG00000024981) #20	C19orf12 (ENSFCAG00000034096) #21	CCNE1 (ENSFCAG00000001624) #22	URI1 (ENSFCAG00000022885) #23	ENSFCAG00000051573	ZNF536 (ENSFCAG00000014303) #24	TSHZ3 (ENSFCAG00000004896) #25	ZNF507 (ENSFCAG00000010663) #26	DPY19L3 (ENSFCAG00000025600) #27	PDCD5 (ENSFCAG00000002326) #28	ANKRD27 (ENSFCAG00000002328) #29	RGS9BP (ENSFCAG00000046519) #30	NUDT19 (ENSFCAG00000045759) #31	TDRD12 (ENSFCAG00000014913) #32	SLC7A9 (ENSFCAG00000014914) #33	ENSFCAG00000027289	CEP89 (ENSFCAG00000014915) #34	FAAP24 (ENSFCAG00000022497) #35
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000156041	ENSGT00390000005105	ENSGT00940000154688.b	ENSGT00990000204193	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Equus	ANCESTRAL SPECIES	1											ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT01100000266640	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00940000158965.a.a	ENSGT00390000018876 #34	ENSGT00390000009456 #35
Donkey	MODERN SPECIES	18							ENSEASG00005025675	ENSEASG00005029556	ENSEASG00005024864	ENSEASG00005029138	ENSEASG00005020935 #17	VSTM2B (ENSEASG00005020939) #18	POP4 (ENSEASG00005024499) #19	PLEKHF1 (ENSEASG00005026468) #20	C19orf12 (ENSEASG00005033066) #21	CCNE1 (ENSEASG00005020958) #22	URI1 (ENSEASG00005020967) #23	ZNF536 (ENSEASG00005020978) #24	TSHZ3 (ENSEASG00005020984) #25	ZNF507 (ENSEASG00005020999) #26	ENSEASG00005034115 #27	DPY19L3 (ENSEASG00005021008) #27	ENSEASG00005033053	PDCD5 (ENSEASG00005026088) #28	ANKRD27 (ENSEASG00005021017) #29	RGS9BP (ENSEASG00005021029) #30	NUDT19 (ENSEASG00005033299) #31	TDRD12 (ENSEASG00005021053) #32	SLC7A9 (ENSEASG00005021090) #33	ENSEASG00005021086	CEP89 (ENSEASG00005021099) #34
Horse	MODERN SPECIES	1											UQCRFS1 (ENSECAG00000004824) #17	VSTM2B (ENSECAG00000026831) #18	POP4 (ENSECAG00000020206) #19	PLEKHF1 (ENSECAG00000039032) #20	C10H19orf12 (ENSECAG00000021258) #21	CCNE1 (ENSECAG00000021289) #22	URI1 (ENSECAG00000007717) #23	ZNF536 (ENSECAG00000013732) #24	ENSECAG00000015459	TSHZ3 (ENSECAG00000016274) #25	ZNF507 (ENSECAG00000017052) #26	DPY19L3 (ENSECAG00000000212) #27	ENSECAG00000037924	PDCD5 (ENSECAG00000019406) #28	ANKRD27 (ENSECAG00000019736) #29	NUDT19 (ENSECAG00000045404) #31	TDRD12 (ENSECAG00000037516) #32	SLC7A9 (ENSECAG00000009914) #33	ENSECAG00000049232	CEP89 (ENSECAG00000020513) #34	FAAP24 (ENSECAG00000008757) #35
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00390000013367	ENSGT00940000156041	ENSGT00390000005105	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00390000013367	ENSGT00940000156041	ENSGT00390000005105	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00940000160442	ENSGT00940000159615	ENSGT00950000182832.D.a	ENSGT00390000014546	ENSGT00940000158102	ENSGT00530000063956.b.a	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00390000003058.b.a.b
Greater horseshoe bat	MODERN SPECIES	6	ITFG1 (ENSRFEG00010014334)	NETO2 (ENSRFEG00010014246)	ENSRFEG00010014197	DNAJA2 (ENSRFEG00010014129)	GPT2 (ENSRFEG00010014039)	C16orf87 (ENSRFEG00010013924)	MYLK3 (ENSRFEG00010013868)	ORC6 (ENSRFEG00010013754)	VPS35 (ENSRFEG00010013687)	SHCBP1 (ENSRFEG00010013445)	UQCRFS1 (ENSRFEG00010013392) #17	VSTM2B (ENSRFEG00010013347) #18	POP4 (ENSRFEG00010013270) #19	PLEKHF1 (ENSRFEG00010013255) #20	C19orf12 (ENSRFEG00010013119) #21	CCNE1 (ENSRFEG00010012966) #22	URI1 (ENSRFEG00010012794) #23	ZNF536 (ENSRFEG00010012717) #24	TSHZ3 (ENSRFEG00010012616) #25	ZNF507 (ENSRFEG00010012577) #26	DPY19L3 (ENSRFEG00010012453) #27	ENSRFEG00010012352	DPEP1 (ENSRFEG00010012303)	CHMP1A (ENSRFEG00010012202)	ENSRFEG00010012104	CDK10 (ENSRFEG00010012042)	SPATA2L (ENSRFEG00010012009)	VPS9D1 (ENSRFEG00010011985)	ZNF276 (ENSRFEG00010011958)	FANCA (ENSRFEG00010011772)	SPIRE2 (ENSRFEG00010011334)
Microbat	MODERN SPECIES	235																CCNE1 (ENSMLUG00000006068) #22
Megabat	MODERN SPECIES	3820																CCNE1 (ENSPVAG00000000719) #22
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000156256 #22
Common shrew	MODERN SPECIES	11936																CCNE1 (ENSSARG00000000591) #22
Hedgehog	MODERN SPECIES	859																CCNE1 (ENSEEUG00000000473) #22
Atlantogenata	ANCESTRAL SPECIES	24	ENSGT00390000013367	ENSGT00940000156041	ENSGT00390000005105	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Afrotheria	ANCESTRAL SPECIES	44	ENSGT00390000013367	ENSGT00940000156041	ENSGT00390000005105	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Afrotheria_a	ANCESTRAL SPECIES	43	ENSGT00950000183118.B	ENSGT00390000013367	ENSGT00940000156041	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24	ENSGT00950000183051.b.a #25	ENSGT00490000043434 #26	ENSGT00530000063023.A.a #27	ENSGT00390000011085 #28	ENSGT00940000157021 #29	ENSGT00940000153725.a.b.a #30	ENSGT00420000029858 #31	ENSGT00420000029847 #32	ENSGT00940000156370 #33	ENSGT00390000018876 #34	ENSGT00390000009456 #35	ENSGT00940000153837.a.b #36	ENSGT00390000007074 #37
Elephant	MODERN SPECIES	393	ITFG1 (ENSLAFG00000006897)	NETO2 (ENSLAFG00000007257)	DNAJA2 (ENSLAFG00000013396)	GPT2 (ENSLAFG00000016529)	C16orf87 (ENSLAFG00000009006)	MYLK3 (ENSLAFG00000001709)	ORC6 (ENSLAFG00000001707)	VPS35 (ENSLAFG00000001705)	SHCBP1 (ENSLAFG00000030123)	ENSLAFG00000029634	UQCRFS1 (ENSLAFG00000002797) #17	VSTM2B (ENSLAFG00000011112) #18	POP4 (ENSLAFG00000000084) #19	PLEKHF1 (ENSLAFG00000030466) #20	C19orf12 (ENSLAFG00000021383) #21	CCNE1 (ENSLAFG00000011876) #22	URI1 (ENSLAFG00000014350) #23	ZNF536 (ENSLAFG00000017731) #24	TSHZ3 (ENSLAFG00000000905) #25	ZNF507 (ENSLAFG00000018078) #26	DPY19L3 (ENSLAFG00000011171) #27	PDCD5 (ENSLAFG00000013922) #28	ANKRD27 (ENSLAFG00000013926) #29	RGS9BP (ENSLAFG00000008696) #30	NUDT19 (ENSLAFG00000032048) #31	TDRD12 (ENSLAFG00000008698) #32	SLC7A9 (ENSLAFG00000008707) #33	CEP89 (ENSLAFG00000006394) #34	FAAP24 (ENSLAFG00000006401) #35	RHPN2 (ENSLAFG00000013586) #36	GPATCH1 (ENSLAFG00000013589) #37
Hyrax	MODERN SPECIES	8719																CCNE1 (ENSPCAG00000014694) #22
Tenrec	MODERN SPECIES	16917																CCNE1 (ENSETEG00000004030) #22
Xenarthra	ANCESTRAL SPECIES	629											ENSGT00390000001014 #17	ENSGT00940000161356 #18	ENSGT00390000010067 #19	ENSGT00940000160728 #20	ENSGT00390000009077 #21	ENSGT00940000156256 #22	ENSGT00390000002362 #23	ENSGT00940000156397.a.a #24
Sloth	MODERN SPECIES	655																CCNE1 (ENSCHOG00000002631) #22
Armadillo	MODERN SPECIES	3938										ENSDNOG00000041324	ENSDNOG00000006321 #17	VSTM2B (ENSDNOG00000005817) #18	POP4 (ENSDNOG00000047663) #19	PLEKHF1 (ENSDNOG00000007576) #20	C19orf12 (ENSDNOG00000032291) #21	CCNE1 (ENSDNOG00000017665) #22	URI1 (ENSDNOG00000036070) #23	ZNF536 (ENSDNOG00000008027) #24