Sciuridae	ANCESTRAL SPECIES		ENSGT00710000106806	ENSGT00940000159247 #7	ENSGT00940000155461.E #8	ENSGT00910000148495	ENSGT00940000156715 #9	ENSGT00940000157926 #10	ENSGT00940000154315.b #11	ENSGT00530000064318 #12	ENSGT00950000183125.a #13	ENSGT00390000003721.d.b #14	ENSGT00940000154045.a #15	ENSGT00390000003057 #16	ENSGT00940000156776 #17	ENSGT00390000014429.b #19	ENSGT00550000074836 #21	ENSGT00940000157002 #22	ENSGT00940000156350 #23	ENSGT00940000154811.A #25	ENSGT00940000153498.B.a #26	ENSGT00390000005508.b #27	ENSGT00940000156105 #28	ENSGT00940000157951 #29	ENSGT00940000155939	ENSGT00940000155918 #32	ENSGT00940000161144.b #34	ENSGT00940000153866.A #35	ENSGT00940000162225 #36	ENSGT00940000155406	ENSGT00940000156098	ENSGT00510000049635	ENSGT00390000003836
Eurasian red squirrel	MODERN SPECIES	3	GATA3 (ENSSVLG00005009625) #7	CELF2 (ENSSVLG00005009748) #8	USP6NL (ENSSVLG00005010103) #9	ECHDC3 (ENSSVLG00005010359) #10	PROSER2 (ENSSVLG00005010392) #11	UPF2 (ENSSVLG00005010430) #12	DHTKD1 (ENSSVLG00005010483) #13	SEC61A2 (ENSSVLG00005010635) #14	NUDT5 (ENSSVLG00005011015) #15	CDC123 (ENSSVLG00005011124) #16	CAMK1D (ENSSVLG00005011210) #17	ENSSVLG00005011462 #18	CCDC3 (ENSSVLG00005011541) #19	ENSSVLG00005011610 #20	YME1L1 (ENSSVLG00005011675) #21	MASTL (ENSSVLG00005011787) #22	ACBD5 (ENSSVLG00005012182) #23	ENSSVLG00005012546 #24	ABI1 (ENSSVLG00005012684) #25	PDSS1 (ENSSVLG00005013153) #26	ENSSVLG00005013262 #27	APBB1IP (ENSSVLG00005013617) #28	GAD2 (ENSSVLG00005013824) #29	ENSSVLG00005014026 #30	ENSSVLG00005014103 #31	GPR158 (ENSSVLG00005014159) #32	ENSSVLG00005014402 #33	THNSL1 (ENSSVLG00005014444) #34	ENKUR (ENSSVLG00005014473) #35	PRTFDC1 (ENSSVLG00005014583) #36	ENSSVLG00005014651 #37
Marmotini	ANCESTRAL SPECIES	21	ENSGT00940000155329.b.a.b.a	ENSGT00940000159247 #7	ENSGT00940000155461.E #8	ENSGT00910000148495	ENSGT00940000156715 #9	ENSGT00940000157926 #10	ENSGT00940000154315.b #11	ENSGT00530000064318 #12	ENSGT00950000183125.a #13	ENSGT00390000003721.d.b #14	ENSGT00940000154045.a #15	ENSGT00390000003057 #16	ENSGT00940000156776 #17	ENSGT00390000014429.b #19	ENSGT00550000074836 #21	ENSGT00940000157002 #22	ENSGT00940000156350 #23	ENSGT00940000154811.A #25	ENSGT00940000153498.B.a #26	ENSGT00390000005508.b #27	ENSGT00940000156105 #28	ENSGT00940000157951 #29	ENSGT00940000155939	ENSGT00940000155918 #32	ENSGT00940000161144.b #34	ENSGT00940000153866.A #35	ENSGT00940000162225 #36	ENSGT00940000155406	ENSGT00940000156098	ENSGT00510000049635	ENSGT00390000003836
Marmotini_b	ANCESTRAL SPECIES	15	ENSGT00710000106806	ENSGT00940000155329.b.a.b.a	ENSGT00940000159247 #7	ENSGT00940000155461.E #8	ENSGT00940000156715 #9	ENSGT00940000157926 #10	ENSGT00940000154315.b #11	ENSGT00530000064318 #12	ENSGT00950000183125.a #13	ENSGT00390000003721.d.b #14	ENSGT00940000154045.a #15	ENSGT00390000003057 #16	ENSGT00940000156776 #17	ENSGT00390000014429.b #19	ENSGT00550000074836 #21	ENSGT00940000157002 #22	ENSGT00940000156350 #23	ENSGT00940000154811.A #25	ENSGT00940000153498.B.a #26	ENSGT00390000005508.b #27	ENSGT00940000156105 #28	ENSGT00940000157951 #29	ENSGT00940000155939	ENSGT00940000155918 #32	ENSGT00940000161144.b #34	ENSGT00940000153866.A #35	ENSGT00940000162225 #36	ENSGT00940000155406	ENSGT00940000156098	ENSGT00510000049635	ENSGT00390000003836
Arctic ground squirrel	MODERN SPECIES	388				ECHDC3 (ENSUPAG00010008927) #10	PROSER2 (ENSUPAG00010008896) #11	ENSUPAG00010008890	UPF2 (ENSUPAG00010008867) #12	DHTKD1 (ENSUPAG00010008790) #13	SEC61A2 (ENSUPAG00010008719) #14	NUDT5 (ENSUPAG00010008681) #15	CDC123 (ENSUPAG00010008644) #16	CAMK1D (ENSUPAG00010008583) #17	ENSUPAG00010008574 #20	CCDC3 (ENSUPAG00010008567) #19	YME1L1 (ENSUPAG00010008503) #21	MASTL (ENSUPAG00010008481) #22	ACBD5 (ENSUPAG00010008177) #23	ABI1 (ENSUPAG00010007329) #25	PDSS1 (ENSUPAG00010007288) #26	ENSUPAG00010007244 #27	APBB1IP (ENSUPAG00010007196) #28
Squirrel	MODERN SPECIES	84	TAF3 (ENSSTOG00000001073)	GATA3 (ENSSTOG00000001075) #7	CELF2 (ENSSTOG00000001564) #8	USP6NL (ENSSTOG00000001581) #9	ECHDC3 (ENSSTOG00000009983) #10	PROSER2 (ENSSTOG00000021219) #11	ENSSTOG00000021094	UPF2 (ENSSTOG00000013075) #12	DHTKD1 (ENSSTOG00000016473) #13	SEC61A2 (ENSSTOG00000016476) #14	NUDT5 (ENSSTOG00000016479) #15	CDC123 (ENSSTOG00000016480) #16	CAMK1D (ENSSTOG00000016481) #17	CCDC3 (ENSSTOG00000031030) #19	YME1L1 (ENSSTOG00000027471) #21	MASTL (ENSSTOG00000010601) #22	ACBD5 (ENSSTOG00000010609) #23	ABI1 (ENSSTOG00000028045) #25	PDSS1 (ENSSTOG00000001698) #26	APBB1IP (ENSSTOG00000010611) #28	GAD2 (ENSSTOG00000002059) #29	MYO3A (ENSSTOG00000000004)	GPR158 (ENSSTOG00000005358) #32	THNSL1 (ENSSTOG00000023171) #34	ENKUR (ENSSTOG00000009536) #35	PRTFDC1 (ENSSTOG00000033462) #36	ARHGAP21 (ENSSTOG00000003561)	KIAA1217 (ENSSTOG00000013522)
Alpin marmot	MODERN SPECIES	41	ENSMMMG00000016407 #7	CELF2 (ENSMMMG00000016437) #8	ENSMMMG00000016571	ENSMMMG00000016575	USP6NL (ENSMMMG00000016577) #9	ECHDC3 (ENSMMMG00000016609) #10	PROSER2 (ENSMMMG00000016619) #11	UPF2 (ENSMMMG00000016627) #12	DHTKD1 (ENSMMMG00000016651) #13	SEC61A2 (ENSMMMG00000016702) #14	NUDT5 (ENSMMMG00000016744) #15	CDC123 (ENSMMMG00000016751) #16	CAMK1D (ENSMMMG00000016767) #17	CCDC3 (ENSMMMG00000016796) #19	YME1L1 (ENSMMMG00000016800) #21	MASTL (ENSMMMG00000016812) #22	ACBD5 (ENSMMMG00000016830) #23	ABI1 (ENSMMMG00000016889) #25	ENSMMMG00000016956	ENSMMMG00000016962 #26	APBB1IP (ENSMMMG00000016974) #28	GAD2 (ENSMMMG00000016992) #29	MYO3A (ENSMMMG00000017006)	ENSMMMG00000017022	GPR158 (ENSMMMG00000017029) #32	THNSL1 (ENSMMMG00000017047) #34	ENKUR (ENSMMMG00000017053) #35	PRTFDC1 (ENSMMMG00000017057) #36	ARHGAP21 (ENSMMMG00000017086)	KIAA1217 (ENSMMMG00000017490)	OTUD1 (ENSMMMG00000017947)