Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000162202.C ##7	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00940000168978	ENSGT00530000063554.b
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000162202.C ##7	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00940000168978	ENSGT00530000063554.b
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000162202.B ##7	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b	ENSGT00940000158636
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000162202.A #7	ENSGT00940000162202.B ##7	ENSGT00940000162121 #8	ENSGT01100000263574.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b	ENSGT00940000158636
Hystricomorpha_b	ANCESTRAL SPECIES	78	ENSGT00940000162202.A #7	ENSGT00940000162202.B ##7	ENSGT00940000162121 #8	ENSGT01100000263574.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b	ENSGT00940000158636
Degu	MODERN SPECIES	141	ENSODEG00000003293 #7	ZNF641 (ENSODEG00000003266) #8	ENSODEG00000003244 #9	ENSODEG00000003231 #10	CCDC184 (ENSODEG00000019270) #11	ASB8 (ENSODEG00000004323) #12	PFKM (ENSODEG00000004315) #13	SENP1 (ENSODEG00000004260) #14	COL2A1 (ENSODEG00000004221) #15	TMEM106C (ENSODEG00000004196) #16	ENSODEG00000004180 #17	HDAC7 (ENSODEG00000003964) #18	SLC48A1 (ENSODEG00000003853) #19	RAPGEF3 (ENSODEG00000003613) #20	ENDOU (ENSODEG00000003517) #21	RPAP3 (ENSODEG00000003489) #22	PCED1B (ENSODEG00000003479) #23	ENSODEG00000018996 #24	AMIGO2 (ENSODEG00000018958) #25	ENSODEG00000003462 #26	ENSODEG00000003450 #27	SLC38A2 (ENSODEG00000003379) #28	SLC38A1 (ENSODEG00000003269) #29	SCAF11 (ENSODEG00000003223) #30	ENSODEG00000019076 #31	ENSODEG00000004013 #32	ARID2 (ENSODEG00000003976) #33	ENSODEG00000003928 #34	ENSODEG00000018973 #35	ENSODEG00000018965 #36	ENSODEG00000003909 #37
Long-tailed chinchilla	MODERN SPECIES	207	ZNF641 (ENSCLAG00000002291) #8	OR10AD1 (ENSCLAG00000002006)	CCDC184 (ENSCLAG00000017612) #11	ASB8 (ENSCLAG00000003759) #12	PFKM (ENSCLAG00000003014) #13	SENP1 (ENSCLAG00000015346) #14	COL2A1 (ENSCLAG00000011781) #15	TMEM106C (ENSCLAG00000008066) #16	VDR (ENSCLAG00000007173) #17	HDAC7 (ENSCLAG00000003217) #18	SLC48A1 (ENSCLAG00000002169) #19	RAPGEF3 (ENSCLAG00000001881) #20	ENDOU (ENSCLAG00000001806) #21	ENSCLAG00000001789	ENSCLAG00000003956	RPAP3 (ENSCLAG00000003507) #22	PCED1B (ENSCLAG00000017610) #23	AMIGO2 (ENSCLAG00000003032) #25	SLC38A4 (ENSCLAG00000002757)	SLC38A2 (ENSCLAG00000002651) #26	SLC38A1 (ENSCLAG00000002175) #29	SCAF11 (ENSCLAG00000002050) #30	ARID2 (ENSCLAG00000001973) #33	ANO6 (ENSCLAG00000002430)	DBX2 (ENSCLAG00000002211)	ENSCLAG00000002122	NELL2 (ENSCLAG00000002075)	TMEM117 (ENSCLAG00000002010)	ENSCLAG00000003492	IRAK4 (ENSCLAG00000002656)	PUS7L (ENSCLAG00000002416)
Guinea pig	MODERN SPECIES	9	ENSCPOG00000036505 ##7	ZNF641 (ENSCPOG00000002770) #8	ENSCPOG00000012386	ENSCPOG00000030096	CCDC184 (ENSCPOG00000008369) #11	ASB8 (ENSCPOG00000030353) #12	PFKM (ENSCPOG00000008351) #13	SENP1 (ENSCPOG00000008340) #14	COL2A1 (ENSCPOG00000000832) #15	TMEM106C (ENSCPOG00000008335) #16	VDR (ENSCPOG00000036166) #17	HDAC7 (ENSCPOG00000006013) #18	SLC48A1 (ENSCPOG00000025631) #19	RAPGEF3 (ENSCPOG00000006002) #20	ENDOU (ENSCPOG00000005999) #21	RPAP3 (ENSCPOG00000002785) #22	AMIGO2 (ENSCPOG00000030831) #25	SLC38A4 (ENSCPOG00000010106)	SLC38A2 (ENSCPOG00000003746) #26	SLC38A1 (ENSCPOG00000005301) #29	SCAF11 (ENSCPOG00000005084) #30	ARID2 (ENSCPOG00000035312) #33	ANO6 (ENSCPOG00000013577)	DBX2 (ENSCPOG00000011069)	NELL2 (ENSCPOG00000000976)	TMEM117 (ENSCPOG00000015520)	TWF1 (ENSCPOG00000001499)	IRAK4 (ENSCPOG00000001771)	PUS7L (ENSCPOG00000001769)	ADAMTS20 (ENSCPOG00000005119)	PRICKLE1 (ENSCPOG00000005579)
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000033180	ENSHGLG00000046091	ENSHGLG00000037629	OR10AD1 (ENSHGLG00000045918)	CCDC184 (ENSHGLG00000035592) #11	ASB8 (ENSHGLG00000042429) #12	PFKM (ENSHGLG00000013968) #13	SENP1 (ENSHGLG00000006533) #14	COL2A1 (ENSHGLG00000017846) #15	TMEM106C (ENSHGLG00000017877) #16	VDR (ENSHGLG00000007266) #17	HDAC7 (ENSHGLG00000007344) #18	ENSHGLG00000007669 #19	RAPGEF3 (ENSHGLG00000008298) #20	ENSHGLG00000010083 #21	ENSHGLG00000007537 #22	ENSHGLG00000006143	ENSHGLG00000041288	PCED1B (ENSHGLG00000041863) #23	AMIGO2 (ENSHGLG00000007945) #25	SLC38A4 (ENSHGLG00000009281)	ENSHGLG00000042041	ENSHGLG00000037591	SLC38A2 (ENSHGLG00000011224) #26	SLC38A1 (ENSHGLG00000003895) #29	ENSHGLG00000004205	ENSHGLG00000018154	SCAF11 (ENSHGLG00000050736) #30	ARID2 (ENSHGLG00000005387) #33	ANO6 (ENSHGLG00000004355)	ENSHGLG00000047418
Sciuridae	ANCESTRAL SPECIES	15	ENSGT00940000162202.C ##7	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00940000168978	ENSGT00530000063554.b
Marmotini	ANCESTRAL SPECIES	19	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a.g	ENSGT01100000263574.a.h	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b	ENSGT00940000158636
Marmotini_b	ANCESTRAL SPECIES	11	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a.g	ENSGT01100000263574.a.h	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b	ENSGT00940000158636
Squirrel	MODERN SPECIES	112	ENSSTOG00000033341 ##7	ZNF641 (ENSSTOG00000001970) #8	OR10AD1 (ENSSTOG00000001963)	CCDC184 (ENSSTOG00000001957) #11	ASB8 (ENSSTOG00000024076) #12	PFKM (ENSSTOG00000001938) #13	SENP1 (ENSSTOG00000001924) #14	COL2A1 (ENSSTOG00000001893) #15	ENSSTOG00000033063	VDR (ENSSTOG00000026741) #17	HDAC7 (ENSSTOG00000001863) #18	SLC48A1 (ENSSTOG00000027173) #19	RAPGEF3 (ENSSTOG00000000974) #20	ENSSTOG00000033662	ENDOU (ENSSTOG00000000959) #21	RPAP3 (ENSSTOG00000000949) #22	ENSSTOG00000033592 #23	AMIGO2 (ENSSTOG00000024156) #25	SLC38A4 (ENSSTOG00000010271)	SLC38A2 (ENSSTOG00000016307) #26	SLC38A1 (ENSSTOG00000016301) #29	SCAF11 (ENSSTOG00000004902) #30	ARID2 (ENSSTOG00000008936) #33	ANO6 (ENSSTOG00000024923)	DBX2 (ENSSTOG00000000232)	NELL2 (ENSSTOG00000019850)	TMEM117 (ENSSTOG00000025184)	TWF1 (ENSSTOG00000006470)	IRAK4 (ENSSTOG00000013841)	PUS7L (ENSSTOG00000006445)	ADAMTS20 (ENSSTOG00000012059)
Arctic ground squirrel	MODERN SPECIES	232	ENSUPAG00010002409 ##7	ZNF641 (ENSUPAG00010002416) #8	H1-7 (ENSUPAG00010002437)	OR10AD1 (ENSUPAG00010002446)	CCDC184 (ENSUPAG00010002458) #11	ASB8 (ENSUPAG00010002462) #12	PFKM (ENSUPAG00010002472) #13	SENP1 (ENSUPAG00010002512) #14	COL2A1 (ENSUPAG00010002564) #15	TMEM106C (ENSUPAG00010002722) #16	VDR (ENSUPAG00010002773) #17	HDAC7 (ENSUPAG00010002786) #18	SLC48A1 (ENSUPAG00010003035) #19	RAPGEF3 (ENSUPAG00010003042) #20	ENDOU (ENSUPAG00010003317) #21	RPAP3 (ENSUPAG00010003351) #22	PCED1B (ENSUPAG00010003361) #23	AMIGO2 (ENSUPAG00010003366) #25	SLC38A4 (ENSUPAG00010003369)	SLC38A2 (ENSUPAG00010003447) #26	SLC38A1 (ENSUPAG00010003457) #29	SCAF11 (ENSUPAG00010003501) #30	ARID2 (ENSUPAG00010003534) #33	ANO6 (ENSUPAG00010003581)
Alpin marmot	MODERN SPECIES	34	ZNF641 (ENSMMMG00000022873) #8	H1-7 (ENSMMMG00000022871)	ENSMMMG00000022868	ENSMMMG00000022866	CCDC184 (ENSMMMG00000022863) #11	ASB8 (ENSMMMG00000022857) #12	PFKM (ENSMMMG00000022833) #13	SENP1 (ENSMMMG00000022823) #14	COL2A1 (ENSMMMG00000022770) #15	TMEM106C (ENSMMMG00000022764) #16	VDR (ENSMMMG00000022758) #17	HDAC7 (ENSMMMG00000022728) #18	SLC48A1 (ENSMMMG00000022726) #19	RAPGEF3 (ENSMMMG00000022694) #20	ENDOU (ENSMMMG00000022689) #21	RPAP3 (ENSMMMG00000022685) #22	PCED1B (ENSMMMG00000022679) #23	ENSMMMG00000022677	AMIGO2 (ENSMMMG00000022674) #25	SLC38A4 (ENSMMMG00000022665)	SLC38A2 (ENSMMMG00000022659) #26	SLC38A1 (ENSMMMG00000022650) #29	SCAF11 (ENSMMMG00000022640) #30	ARID2 (ENSMMMG00000022637) #33	ANO6 (ENSMMMG00000022622)	DBX2 (ENSMMMG00000022619)	NELL2 (ENSMMMG00000022605)	TMEM117 (ENSMMMG00000022603)	TWF1 (ENSMMMG00000022600)	IRAK4 (ENSMMMG00000022596)	ENSMMMG00000022591
Eurasian red squirrel	MODERN SPECIES	14	ZNF641 (ENSSVLG00005010861) #8	H1-7 (ENSSVLG00005010817)	OR10AD1 (ENSSVLG00005010756)	CCDC184 (ENSSVLG00005010675) #11	ASB8 (ENSSVLG00005010618) #12	PFKM (ENSSVLG00005010346) #13	SENP1 (ENSSVLG00005010219) #14	COL2A1 (ENSSVLG00005009560) #15	TMEM106C (ENSSVLG00005009433) #16	ENSSVLG00005009403	VDR (ENSSVLG00005009383) #17	HDAC7 (ENSSVLG00005008826) #18	SLC48A1 (ENSSVLG00005008734) #19	RAPGEF3 (ENSSVLG00005008443) #20	ENDOU (ENSSVLG00005008365) #21	RPAP3 (ENSSVLG00005008306) #22	PCED1B (ENSSVLG00005008259) #23	AMIGO2 (ENSSVLG00005008248) #25	SLC38A4 (ENSSVLG00005008149)	SLC38A2 (ENSSVLG00005007998) #26	SLC38A1 (ENSSVLG00005007955) #29	SCAF11 (ENSSVLG00005007909) #30	ARID2 (ENSSVLG00005007791) #33	EEF2 (ENSSVLG00005007723)	ANO6 (ENSSVLG00005007489)	DBX2 (ENSSVLG00005007393)	NELL2 (ENSSVLG00005007103)	TMEM117 (ENSSVLG00005006963)	TWF1 (ENSSVLG00005006901)	IRAK4 (ENSSVLG00005006847)	ENSSVLG00005024271
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000162202.C ##7	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b	ENSGT00940000158636
Kangaroo rat	MODERN SPECIES	361	ENSDORG00000025213 ##7	Zfp641 (ENSDORG00000011810) #8	ENSDORG00000027881	ENSDORG00000027511	Ccdc184 (ENSDORG00000000096) #11	Asb8 (ENSDORG00000027268) #12	Pfkm (ENSDORG00000000094) #13	Senp1 (ENSDORG00000000092) #14	Col2a1 (ENSDORG00000012020) #15	Tmem106c (ENSDORG00000012018) #16	ENSDORG00000027162 #17	Hdac7 (ENSDORG00000016267) #18	Slc48a1 (ENSDORG00000026104) #19	ENSDORG00000016264 #20	Endou (ENSDORG00000016263) #21	Rpap3 (ENSDORG00000006069) #22	Pced1b (ENSDORG00000028185) #23	Amigo2 (ENSDORG00000026278) #25	Slc38a4 (ENSDORG00000003163)	Slc38a2 (ENSDORG00000007910) #26	Slc38a1 (ENSDORG00000028155) #29	Scaf11 (ENSDORG00000002262) #30	Arid2 (ENSDORG00000012273) #33	Ano6 (ENSDORG00000011423)	ENSDORG00000008308	Nell2 (ENSDORG00000010044)	Tmem117 (ENSDORG00000003811)	Twf1 (ENSDORG00000027567)	Irak4 (ENSDORG00000015110)	Pus7l (ENSDORG00000015109)	Adamts20 (ENSDORG00000013168)
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000162202.C ##7	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00900000143510	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b
Lesser Egyptian jerboa	MODERN SPECIES	157	ENSJJAG00000001609 ##7	Zfp641 (ENSJJAG00000023912) #8	ENSJJAG00000014189	ENSJJAG00000023686	Ccdc184 (ENSJJAG00000014181) #11	ENSJJAG00000023643 #12	Pfkm (ENSJJAG00000021525) #13	Senp1 (ENSJJAG00000015040) #14	Col2a1 (ENSJJAG00000019255) #15	ENSJJAG00000015566	ENSJJAG00000013784 #17	Hdac7 (ENSJJAG00000021127) #18	Slc48a1 (ENSJJAG00000008709) #19	ENSJJAG00000019771 #20	Endou (ENSJJAG00000019156) #21	Rpap3 (ENSJJAG00000018688) #22	Amigo2 (ENSJJAG00000018293) #25	Slc38a4 (ENSJJAG00000015534)	ENSJJAG00000014336	Slc38a2 (ENSJJAG00000013665) #26	Slc38a1 (ENSJJAG00000013537) #29	ENSJJAG00000012055	Scaf11 (ENSJJAG00000009595) #30	ENSJJAG00000003064 #33	ENSJJAG00000020460 #33	ENSJJAG00000018413	Ano6 (ENSJJAG00000015358)	Dbx2 (ENSJJAG00000014537)	ENSJJAG00000011568	Nell2 (ENSJJAG00000008540)	Tmem117 (ENSJJAG00000011809)
Muroidea	ANCESTRAL SPECIES	31	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a.f.b	ENSGT01100000263574.a.f.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00900000143510	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	1138			ENSNGAG00000011812	ENSNGAG00000017567	Ccdc184 (ENSNGAG00000007436) #11	Asb8 (ENSNGAG00000018172) #12	Pfkm (ENSNGAG00000020307) #13	Senp1 (ENSNGAG00000021029) #14	Col2a1 (ENSNGAG00000003216) #15	ENSNGAG00000017065	ENSNGAG00000011996 #17	Hdac7 (ENSNGAG00000017210) #18	Slc48a1 (ENSNGAG00000013864) #19	Rapgef3 (ENSNGAG00000021251) #20	Endou (ENSNGAG00000019900) #21	Rpap3 (ENSNGAG00000021591) #22	Amigo2 (ENSNGAG00000001744) #25	Slc38a4 (ENSNGAG00000006968)	ENSNGAG00000017653	ENSNGAG00000018530 #26	Slc38a1 (ENSNGAG00000019998) #29	Scaf11 (ENSNGAG00000001164) #30	ENSNGAG00000011742 #33	ENSNGAG00000007967 #33
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a.f.b	ENSGT01100000263574.a.f.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b	ENSGT00940000158636
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a.f.b	ENSGT01100000263574.a.f.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b	ENSGT00940000158636
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a.f.b	ENSGT01100000263574.a.f.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b	ENSGT00940000158636
Golden Hamster	MODERN SPECIES	626	H1f7 (ENSMAUG00000010839)	ENSMAUG00000014007	ENSMAUG00000019216	Ccdc184 (ENSMAUG00000010780) #11	Asb8 (ENSMAUG00000019139) #12	Pfkm (ENSMAUG00000016492) #13	ENSMAUG00000015838	ENSMAUG00000015983 #14	Col2a1 (ENSMAUG00000019899) #15	Tmem106c (ENSMAUG00000017478) #16	Vdr (ENSMAUG00000015419) #17	Hdac7 (ENSMAUG00000020243) #18	Slc48a1 (ENSMAUG00000019302) #19	Rapgef3 (ENSMAUG00000018637) #20	Endou (ENSMAUG00000013605) #21	Rpap3 (ENSMAUG00000018381) #22	Amigo2 (ENSMAUG00000010784) #25	Slc38a4 (ENSMAUG00000010661)	Slc38a2 (ENSMAUG00000009909) #26	Slc38a1 (ENSMAUG00000009292) #29	ENSMAUG00000010698	ENSMAUG00000010427	Scaf11 (ENSMAUG00000016564) #30	Arid2 (ENSMAUG00000010801) #33	Ano6 (ENSMAUG00000009991)	ENSMAUG00000009068	Nell2 (ENSMAUG00000011805)	Tmem117 (ENSMAUG00000011415)	Twf1 (ENSMAUG00000010896)	Irak4 (ENSMAUG00000015813)	Pus7l (ENSMAUG00000012622)
Chinese hamster chok1gshd	MODERN SPECIES	1	ENSCGRG00001009005	ENSCGRG00001008716	ENSCGRG00001004363	Ccdc184 (ENSCGRG00001009478) #11	ENSCGRG00001001830	Asb8 (ENSCGRG00001010162) #12	Pfkm (ENSCGRG00001000911) #13	Senp1 (ENSCGRG00001003916) #14	Col2a1 (ENSCGRG00001000766) #15	Tmem106c (ENSCGRG00001001872) #16	Vdr (ENSCGRG00001003356) #17	Hdac7 (ENSCGRG00001023917) #18	Slc48a1 (ENSCGRG00001012997) #19	Rapgef3 (ENSCGRG00001008173) #20	Endou (ENSCGRG00001001419) #21	Rpap3 (ENSCGRG00001010868) #22	Pced1b (ENSCGRG00001009722) #23	Amigo2 (ENSCGRG00001009389) #25	ENSCGRG00001000597 #26	Slc38a2 (ENSCGRG00001001349) #26	Slc38a1 (ENSCGRG00001013047) #29	Scaf11 (ENSCGRG00001000868) #30	Arid2 (ENSCGRG00001004106) #33	ENSCGRG00001023780	Ano6 (ENSCGRG00001003724)	ENSCGRG00001001693	Dbx2 (ENSCGRG00001002554)	Nell2 (ENSCGRG00001001600)	Tmem117 (ENSCGRG00001004267)	Twf1 (ENSCGRG00001002511)	Irak4 (ENSCGRG00001008384)
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000162202.C ##7	ENSGT00940000162121 #8	ENSGT01100000263574.a.f.b	ENSGT01100000263574.a.f.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b	ENSGT00940000158636
Prairie vole	MODERN SPECIES	2	ENSMOCG00000001245	ENSMOCG00000001175	Ccdc184 (ENSMOCG00000003788) #11	Asb8 (ENSMOCG00000017776) #12	Pfkm (ENSMOCG00000021333) #13	ENSMOCG00000015383	ENSMOCG00000002706 #14	Col2a1 (ENSMOCG00000014833) #15	Tmem106c (ENSMOCG00000016714) #16	ENSMOCG00000013472 #17	Hdac7 (ENSMOCG00000019731) #18	Slc48a1 (ENSMOCG00000013448) #19	Rapgef3 (ENSMOCG00000002335) #20	Endou (ENSMOCG00000015012) #21	ENSMOCG00000005623	Rpap3 (ENSMOCG00000021033) #22	Pced1b (ENSMOCG00000005496) #23	Amigo2 (ENSMOCG00000013021) #25	Slc38a4 (ENSMOCG00000015247)	Slc38a2 (ENSMOCG00000003601) #26	Slc38a1 (ENSMOCG00000006739) #29	Scaf11 (ENSMOCG00000000678) #30	ENSMOCG00000019972 #33	ENSMOCG00000016077 #33	Ano6 (ENSMOCG00000018323)	Nell2 (ENSMOCG00000002600)	ENSMOCG00000008187	ENSMOCG00000015409	Cyp11b1 (ENSMOCG00000020170)	Cyp11b2 (ENSMOCG00000001733)	Ly6m (ENSMOCG00000018758)
Northern American deer mouse	MODERN SPECIES	12	Zfp641 (ENSPEMG00000026282) #8	ENSPEMG00000030364	ENSPEMG00000028880	ENSPEMG00000026188	Ccdc184 (ENSPEMG00000014959) #11	Asb8 (ENSPEMG00000026668) #12	Pfkm (ENSPEMG00000009521) #13	Senp1 (ENSPEMG00000030376) #14	Col2a1 (ENSPEMG00000012994) #15	Tmem106c (ENSPEMG00000003606) #16	Vdr (ENSPEMG00000026662) #17	Hdac7 (ENSPEMG00000008893) #18	Slc48a1 (ENSPEMG00000026517) #19	Rapgef3 (ENSPEMG00000013140) #20	Endou (ENSPEMG00000000039) #21	Rpap3 (ENSPEMG00000017686) #22	Pced1b (ENSPEMG00000017062) #23	Amigo2 (ENSPEMG00000014410) #25	Slc38a4 (ENSPEMG00000012063)	Slc38a2 (ENSPEMG00000016717) #26	ENSPEMG00000027302 #29	ENSPEMG00000030307	Arid2 (ENSPEMG00000014806) #33	ENSPEMG00000030605	Ano6 (ENSPEMG00000022036)	Dbx2 (ENSPEMG00000021509)	Nell2 (ENSPEMG00000021060)	ENSPEMG00000024666	Tmem117 (ENSPEMG00000006395)	Twf1 (ENSPEMG00000000838)	Irak4 (ENSPEMG00000018737)
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000162202.C ##7	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a.f.a	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b	ENSGT00940000158636
Rat	MODERN SPECIES	17	H1f7 (ENSRNOG00000029545)	Olr1877 (ENSRNOG00000070612)	Olfr287 (ENSRNOG00000066134)	Or10ad1 (ENSRNOG00000064488)	Ccdc184 (ENSRNOG00000021945) #11	Asb8 (ENSRNOG00000010099) #12	Pfkm (ENSRNOG00000057988) #13	Senp1 (ENSRNOG00000022260) #14	Col2a1 (ENSRNOG00000058560) #15	Tmem106c (ENSRNOG00000053269) #16	Vdr (ENSRNOG00000054420) #17	Hdac7 (ENSRNOG00000055597) #18	Slc48a1 (ENSRNOG00000053196) #19	Rapgef3 (ENSRNOG00000059961) #20	Endou (ENSRNOG00000056446) #21	Rpap3 (ENSRNOG00000053405) #22	RGD1565798 (ENSRNOG00000002475)	Pced1b (ENSRNOG00000022807) #23	Amigo2 (ENSRNOG00000007032) #25	Slc38a4 (ENSRNOG00000006653)	Slc38a2 (ENSRNOG00000006305) #26	Slc38a1 (ENSRNOG00000005291) #29	RGD1564963 (ENSRNOG00000069806)	Scaf11 (ENSRNOG00000005263) #30	Arid2 (ENSRNOG00000004831) #33	ENSRNOG00000067243	Ano6 (ENSRNOG00000006995)	Dbx2 (ENSRNOG00000006885)	Nell2 (ENSRNOG00000006235)	Tmem117 (ENSRNOG00000006068)	ENSRNOG00000064416
Mus	ANCESTRAL SPECIES	11	ENSGT00730000111596	ENSGT01100000263574.a.f.a.f	ENSGT01100000263574.a.f.a.e.a	ENSGT01100000263574.a.f.a.e.b	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749 #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00860000136064	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b
Shrew mouse	MODERN SPECIES	8	Zfp641 (MGP_PahariEiJ_G0020230) #8	H1f7 (MGP_PahariEiJ_G0020229)	MGP_PahariEiJ_G0020228	MGP_PahariEiJ_G0020227	Ccdc184 (MGP_PahariEiJ_G0020226) #11	Asb8 (MGP_PahariEiJ_G0020225) #12	Pfkm (MGP_PahariEiJ_G0020224) #13	Senp1 (MGP_PahariEiJ_G0020223) #14	Col2a1 (MGP_PahariEiJ_G0020222) #15	Tmem106c (MGP_PahariEiJ_G0020221) #16	Vdr (MGP_PahariEiJ_G0020220) #17	Hdac7 (MGP_PahariEiJ_G0020219) #18	Slc48a1 (MGP_PahariEiJ_G0020218) #19	Rapgef3 (MGP_PahariEiJ_G0020217) #20	Endou (MGP_PahariEiJ_G0020216) #21	Rpap3 (MGP_PahariEiJ_G0020215) #22	Pced1b (MGP_PahariEiJ_G0020214) #23	Amigo2 (MGP_PahariEiJ_G0020213) #25	Slc38a4 (MGP_PahariEiJ_G0020212)	Slc38a2 (MGP_PahariEiJ_G0020211) #26	Slc38a1 (MGP_PahariEiJ_G0020210) #29	Scaf11 (MGP_PahariEiJ_G0020209) #30	Arid2 (MGP_PahariEiJ_G0020208) #33	MGP_PahariEiJ_G0020207	Ano6 (MGP_PahariEiJ_G0020206)	MGP_PahariEiJ_G0020205	Dbx2 (MGP_PahariEiJ_G0020204)	Nell2 (MGP_PahariEiJ_G0020203)	Tmem117 (MGP_PahariEiJ_G0020202)	Twf1 (MGP_PahariEiJ_G0020201)	Irak4 (MGP_PahariEiJ_G0020200)
Mus_A	DUPLICATION
Mus_A	ANCESTRAL SPECIES	13	ENSGT00730000111596	ENSGT01100000263574.a.f.a.e.b.a.a	ENSGT01100000263574.a.f.a.f	ENSGT01100000263574.a.f.a.e.b.a.b	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749.c #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00860000136064	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a.f.a.f	ENSGT01100000263574.a.f.a.e.b.a.b	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749.c #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00860000136064	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b
Mus_C	ANCESTRAL SPECIES	17	ENSGT00940000162121 #8	ENSGT00730000111596	ENSGT01100000263574.a.f.a.f	ENSGT01100000263574.a.f.a.e.b.a.b	ENSGT00390000002978 #11	ENSGT00940000159366 #12	ENSGT00940000155440.d #13	ENSGT00940000155489.b.f #14	ENSGT00940000155224 #15	ENSGT00940000161281 #16	ENSGT00940000155473 #17	ENSGT00940000159065 #18	ENSGT00390000002307 #19	ENSGT00940000159931 #20	ENSGT00530000063825.B #21	ENSGT00940000156749.c #22	ENSGT00390000002231.d.a #23	ENSGT00950000183146.a.a #25	ENSGT00940000158917	ENSGT00940000155486 #26	ENSGT00940000160716 #29	ENSGT00950000183205.b.a.b.a.b #30	ENSGT00390000016138 #33	ENSGT00940000158969	ENSGT00860000136064	ENSGT00950000183093.A.a	ENSGT00810000125439.B	ENSGT00390000013052	ENSGT00530000063868.b	ENSGT00940000158792	ENSGT00530000063554.b
Steppe mouse	MODERN SPECIES	3265											Vdr (ENSMSIG00000028053) #17	Hdac7 (ENSMSIG00000027292) #18	Slc48a1 (ENSMSIG00000027281) #19	Rapgef3 (ENSMSIG00000027208) #20	Endou (ENSMSIG00000027161) #21	Rpap3 (ENSMSIG00000027120) #22	Pced1b (ENSMSIG00000027114) #23	Amigo2 (ENSMSIG00000027100) #25	Slc38a4 (ENSMSIG00000027038)	Slc38a2 (ENSMSIG00000027016) #26	Slc38a1 (ENSMSIG00000026985) #29	Scaf11 (ENSMSIG00000026922) #30	Arid2 (ENSMSIG00000026910) #33	ENSMSIG00000026901	Ano6 (ENSMSIG00000026819)	Dbx2 (ENSMSIG00000026810)	ENSMSIG00000026795	Nell2 (ENSMSIG00000026630)	Tmem117 (ENSMSIG00000026602)
spretus	MODERN SPECIES	6	Zfp641 (MGP_SPRETEiJ_G0021123) #8	H1f7 (MGP_SPRETEiJ_G0021122)	MGP_SPRETEiJ_G0021121	MGP_SPRETEiJ_G0021120	Ccdc184 (MGP_SPRETEiJ_G0021119) #11	Asb8 (MGP_SPRETEiJ_G0021118) #12	Pfkm (MGP_SPRETEiJ_G0021117) #13	Senp1 (MGP_SPRETEiJ_G0021116) #14	Col2a1 (MGP_SPRETEiJ_G0021115) #15	Tmem106c (MGP_SPRETEiJ_G0021114) #16	Vdr (MGP_SPRETEiJ_G0021113) #17	Hdac7 (MGP_SPRETEiJ_G0021112) #18	Slc48a1 (MGP_SPRETEiJ_G0021111) #19	Rapgef3 (MGP_SPRETEiJ_G0021110) #20	MGP_SPRETEiJ_G0021109 #21	Rpap3 (MGP_SPRETEiJ_G0021108) #22	Pced1b (MGP_SPRETEiJ_G0021107) #23	Amigo2 (MGP_SPRETEiJ_G0021106) #25	Slc38a4 (MGP_SPRETEiJ_G0021105)	MGP_SPRETEiJ_G0021104	Slc38a2 (MGP_SPRETEiJ_G0021103) #26	Slc38a1 (MGP_SPRETEiJ_G0021102) #29	Scaf11 (MGP_SPRETEiJ_G0021101) #30	Arid2 (MGP_SPRETEiJ_G0021100) #33	MGP_SPRETEiJ_G0021099	Ano6 (MGP_SPRETEiJ_G0021098)	MGP_SPRETEiJ_G0021097	Dbx2 (MGP_SPRETEiJ_G0021096)	Nell2 (MGP_SPRETEiJ_G0021095)	Tmem117 (MGP_SPRETEiJ_G0021094)	Twf1 (MGP_SPRETEiJ_G0021093)
Mouse	MODERN SPECIES	6	Or10ad1b (ENSMUSG00000059460)	Or10ad1 (ENSMUSG00000090129)	Gm44579 (ENSMUSG00000108748)	Or10ad1c (ENSMUSG00000075427)	Ccdc184 (ENSMUSG00000029875) #11	Asb8 (ENSMUSG00000048175) #12	Pfkm (ENSMUSG00000033065) #13	Senp1 (ENSMUSG00000033075) #14	Col2a1 (ENSMUSG00000022483) #15	Tmem106c (ENSMUSG00000052369) #16	Vdr (ENSMUSG00000022479) #17	Hdac7 (ENSMUSG00000022475) #18	Slc48a1 (ENSMUSG00000081534) #19	Rapgef3 (ENSMUSG00000022469) #20	Endou (ENSMUSG00000022468) #21	Rpap3 (ENSMUSG00000022466) #22	Pced1b (ENSMUSG00000044250) #23	Amigo2 (ENSMUSG00000048218) #25	Slc38a4 (ENSMUSG00000022464)	Slc38a2 (ENSMUSG00000022462) #26	Slc38a1 (ENSMUSG00000023169) #29	Scaf11 (ENSMUSG00000033228) #30	Arid2 (ENSMUSG00000033237) #33	Ano6 (ENSMUSG00000064210)	Dbx2 (ENSMUSG00000045608)	Nell2 (ENSMUSG00000022454)	Tmem117 (ENSMUSG00000063296)	Twf1 (ENSMUSG00000022451)	Irak4 (ENSMUSG00000059883)	Pus7l (ENSMUSG00000033356)	Adamts20 (ENSMUSG00000022449)
Ryukyu mouse	MODERN SPECIES	6	Zfp641 (MGP_CAROLIEiJ_G0020227) #8	H1f7 (MGP_CAROLIEiJ_G0020226)	MGP_CAROLIEiJ_G0020225	MGP_CAROLIEiJ_G0020224	Ccdc184 (MGP_CAROLIEiJ_G0020223) #11	Asb8 (MGP_CAROLIEiJ_G0020222) #12	Pfkm (MGP_CAROLIEiJ_G0020221) #13	Senp1 (MGP_CAROLIEiJ_G0020220) #14	Col2a1 (MGP_CAROLIEiJ_G0020219) #15	Tmem106c (MGP_CAROLIEiJ_G0020218) #16	Vdr (MGP_CAROLIEiJ_G0020217) #17	Hdac7 (MGP_CAROLIEiJ_G0020216) #18	Slc48a1 (MGP_CAROLIEiJ_G0020215) #19	Rapgef3 (MGP_CAROLIEiJ_G0020214) #20	MGP_CAROLIEiJ_G0020213 #21	Rpap3 (MGP_CAROLIEiJ_G0020212) #22	Pced1b (MGP_CAROLIEiJ_G0020211) #23	Amigo2 (MGP_CAROLIEiJ_G0020210) #25	Slc38a4 (MGP_CAROLIEiJ_G0020209)	MGP_CAROLIEiJ_G0020208	Slc38a2 (MGP_CAROLIEiJ_G0020207) #26	Slc38a1 (MGP_CAROLIEiJ_G0020206) #29	Scaf11 (MGP_CAROLIEiJ_G0020205) #30	Arid2 (MGP_CAROLIEiJ_G0020204) #33	MGP_CAROLIEiJ_G0020203	Ano6 (MGP_CAROLIEiJ_G0020202)	MGP_CAROLIEiJ_G0020201	MGP_CAROLIEiJ_G0020200	Nell2 (MGP_CAROLIEiJ_G0020199)	Tmem117 (MGP_CAROLIEiJ_G0020198)	Twf1 (MGP_CAROLIEiJ_G0020197)
Mus_A	ANCESTRAL SPECIES																	ENSGT00940000156749.d #22
Mus_B	ANCESTRAL SPECIES																	ENSGT00940000156749.d #22
Mus_C	ANCESTRAL SPECIES																	ENSGT00940000156749.d #22
Steppe mouse	MODERN SPECIES	3006														ENSMSIG00000030680	ENSMSIG00000030677	ENSMSIG00000030674 #22