Sarcopterygii	ANCESTRAL SPECIES	1	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565	ENSGT00390000001500
Tetrapoda	ANCESTRAL SPECIES	2	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Amniota	ANCESTRAL SPECIES	4	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Mammalia	ANCESTRAL SPECIES	5	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Theria	ANCESTRAL SPECIES	11	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Eutheria	ANCESTRAL SPECIES	6	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Atlantogenata	ANCESTRAL SPECIES		ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Afrotheria	ANCESTRAL SPECIES	73	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Afrotheria_a	ANCESTRAL SPECIES	72	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Elephant	MODERN SPECIES	2	SLC27A6 (ENSLAFG00000002158) #7	FBN2 (ENSLAFG00000012286) #8	SLC12A2 (ENSLAFG00000002532) #9	CTXN3 (ENSLAFG00000003453) #10	PRRC1 (ENSLAFG00000022605) #11	MEGF10 (ENSLAFG00000018279) #12	C5orf63 (ENSLAFG00000012527) #13	MARCHF3 (ENSLAFG00000017629) #14	LMNB1 (ENSLAFG00000017617) #15	TEX43 (ENSLAFG00000015284) #16	PHAX (ENSLAFG00000021711) #17	ALDH7A1 (ENSLAFG00000018522) #18	GRAMD2B (ENSLAFG00000018520) #19	ZNF608 (ENSLAFG00000015124) #20	CSNK1G3 (ENSLAFG00000007774) #21	CEP120 (ENSLAFG00000010548) #22	PRDM6 (ENSLAFG00000000396) #23	PPIC (ENSLAFG00000012206) #24	SNX24 (ENSLAFG00000008244) #25	SNX2 (ENSLAFG00000013015) #26	SNCAIP (ENSLAFG00000011510) #27	ENSLAFG00000026326 #28	ENSLAFG00000011621 #29	LOX (ENSLAFG00000015308) #30	SRFBP1 (ENSLAFG00000015303) #31	FTMT (ENSLAFG00000028951) #32	ENSLAFG00000028219 #33	PRR16 (ENSLAFG00000002441) #34	ENSLAFG00000028710 #35	FAM170A (ENSLAFG00000018269) #36	HSD17B4 (ENSLAFG00000017053) #37
Xenarthra	ANCESTRAL SPECIES	859														ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25
Sloth	MODERN SPECIES	5690																CEP120 (ENSCHOG00000003661) #22
Armadillo	MODERN SPECIES	1425											ENSDNOG00000039495	ZNF608 (ENSDNOG00000019392) #20	ENSDNOG00000031213	ENSDNOG00000046866	CSNK1G3 (ENSDNOG00000012155) #21	CEP120 (ENSDNOG00000012028) #22	PRDM6 (ENSDNOG00000006337) #23	PPIC (ENSDNOG00000006330) #24	SNX24 (ENSDNOG00000038511) #25
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000155742 #9	ENSGT00940000170965	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Glires	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Rodentia	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Sciuridae	ANCESTRAL SPECIES	18	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Marmotini	ANCESTRAL SPECIES	50				ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Marmotini_b	ANCESTRAL SPECIES	190												ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Arctic ground squirrel	MODERN SPECIES	168														ENSUPAG00010003607	CSNK1G3 (ENSUPAG00010003616) #21	CEP120 (ENSUPAG00010003650) #22	PRDM6 (ENSUPAG00010003694) #23	PPIC (ENSUPAG00010003724) #24	SNX24 (ENSUPAG00010003736) #25	ENSUPAG00010003751 #26	SNCAIP (ENSUPAG00010003776) #27	ENSUPAG00010003843 #28	ENSUPAG00010003847 #29	LOX (ENSUPAG00010003850) #30	SRFBP1 (ENSUPAG00010003868) #31	ENSUPAG00010003888	FTMT (ENSUPAG00010003933) #32	PRR16 (ENSUPAG00010003942) #34	ENSUPAG00010003954
Squirrel	MODERN SPECIES	175												ALDH7A1 (ENSSTOG00000004369) #18	GRAMD2B (ENSSTOG00000021703) #19	ZNF608 (ENSSTOG00000006518) #20	CSNK1G3 (ENSSTOG00000002147) #21	CEP120 (ENSSTOG00000004518) #22	PRDM6 (ENSSTOG00000006419) #23	PPIC (ENSSTOG00000006407) #24	SNX24 (ENSSTOG00000006391) #25	ENSSTOG00000025879	SNX2 (ENSSTOG00000006362) #26	SNCAIP (ENSSTOG00000024491) #27	ENSSTOG00000016375 #28	LOX (ENSSTOG00000016372) #30	SRFBP1 (ENSSTOG00000029184) #31	FTMT (ENSSTOG00000022248) #32	PRR16 (ENSSTOG00000003722) #34	FAM170A (ENSSTOG00000026053) #36
Alpin marmot	MODERN SPECIES		PRRC1 (ENSMMMG00000019979) #11	MEGF10 (ENSMMMG00000019988) #12	ENSMMMG00000020005	C5orf63 (ENSMMMG00000020014) #13	MARCHF3 (ENSMMMG00000020035) #14	LMNB1 (ENSMMMG00000020037) #15	ENSMMMG00000020047	TEX43 (ENSMMMG00000020056) #16	PHAX (ENSMMMG00000020058) #17	ALDH7A1 (ENSMMMG00000020066) #18	GRAMD2B (ENSMMMG00000020111) #19	ZNF608 (ENSMMMG00000020134) #20	ENSMMMG00000020141	ENSMMMG00000020156	CSNK1G3 (ENSMMMG00000020164) #21	CEP120 (ENSMMMG00000020173) #22	PRDM6 (ENSMMMG00000020196) #23	PPIC (ENSMMMG00000020213) #24	SNX24 (ENSMMMG00000020217) #25	SNX2 (ENSMMMG00000020244) #26	ENSMMMG00000020259	SNCAIP (ENSMMMG00000020272) #27	ENSMMMG00000020380 #28	ENSMMMG00000020385 #29	LOX (ENSMMMG00000020396) #30	SRFBP1 (ENSMMMG00000020429) #31	ENSMMMG00000020462	ENSMMMG00000020476
Eurasian red squirrel	MODERN SPECIES	15	CTXN3 (ENSSVLG00005005087) #10	PRRC1 (ENSSVLG00005004991) #11	MEGF10 (ENSSVLG00005004843) #12	C5orf63 (ENSSVLG00005004783) #13	MARCHF3 (ENSSVLG00005004764) #14	LMNB1 (ENSSVLG00005004744) #15	ENSSVLG00005004726	TEX43 (ENSSVLG00005004712) #16	PHAX (ENSSVLG00005004699) #17	ALDH7A1 (ENSSVLG00005004589) #18	GRAMD2B (ENSSVLG00005004428) #19	ZNF608 (ENSSVLG00005004336) #20	ENSSVLG00005004297	CSNK1G3 (ENSSVLG00005004142) #21	ENSSVLG00005004089	CEP120 (ENSSVLG00005004058) #22	PRDM6 (ENSSVLG00005004034) #23	PPIC (ENSSVLG00005004009) #24	SNX24 (ENSSVLG00005003984) #25	SNX2 (ENSSVLG00005003949) #26	ENSSVLG00005003932	SNCAIP (ENSSVLG00005003846) #27	ENSSVLG00005003788 #28	ENSSVLG00005003776	ENSSVLG00005003755 #29	LOX (ENSSVLG00005003736) #30	SRFBP1 (ENSSVLG00005003722) #31	FTMT (ENSSVLG00005003703) #32	PRR16 (ENSSVLG00005015533) #34	ENSSVLG00005015499	ENSSVLG00005015460
Hystricomorpha	ANCESTRAL SPECIES	27	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32
Hystricomorpha_a	ANCESTRAL SPECIES	24	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32
Hystricomorpha_b	ANCESTRAL SPECIES	57	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31
Long-tailed chinchilla	MODERN SPECIES	228							LMNB1 (ENSCLAG00000002790) #15	TEX43 (ENSCLAG00000002739) #16	PHAX (ENSCLAG00000002608) #17	ALDH7A1 (ENSCLAG00000002348) #18	ENSCLAG00000002267	GRAMD2B (ENSCLAG00000001599) #19	ZNF608 (ENSCLAG00000001509) #20	ENSCLAG00000001464	CSNK1G3 (ENSCLAG00000001361) #21	CEP120 (ENSCLAG00000002139) #22	PRDM6 (ENSCLAG00000001454) #23	PPIC (ENSCLAG00000001442) #24	SNX24 (ENSCLAG00000001360) #25	ENSCLAG00000001285 #26	ENSCLAG00000001221	SNCAIP (ENSCLAG00000005844) #27	ENSCLAG00000004339 #28	LOX (ENSCLAG00000004052) #30	SRFBP1 (ENSCLAG00000003630) #31
Guinea pig	MODERN SPECIES	6	CTXN3 (ENSCPOG00000031953) #10	PRRC1 (ENSCPOG00000010724) #11	MEGF10 (ENSCPOG00000003151) #12	C5orf63 (ENSCPOG00000039359) #13	ENSCPOG00000022550	MARCHF3 (ENSCPOG00000032636) #14	LMNB1 (ENSCPOG00000013383) #15	TEX43 (ENSCPOG00000013123) #16	PHAX (ENSCPOG00000026981) #17	ALDH7A1 (ENSCPOG00000013120) #18	GRAMD2B (ENSCPOG00000033571) #19	ENSCPOG00000039938	ZNF608 (ENSCPOG00000007196) #20	CSNK1G3 (ENSCPOG00000007642) #21	ENSCPOG00000026604	CEP120 (ENSCPOG00000023434) #22	PRDM6 (ENSCPOG00000004258) #23	PPIC (ENSCPOG00000038580) #24	SNX24 (ENSCPOG00000031081) #25	SNX2 (ENSCPOG00000010095) #26	SNCAIP (ENSCPOG00000003517) #27	ENSCPOG00000015378 #28	ENSCPOG00000023049 #30	SRFBP1 (ENSCPOG00000004695) #31	FTMT (ENSCPOG00000021524) #32	ENSCPOG00000039823	ENSCPOG00000031274	ENSCPOG00000037919	ATP12A (ENSCPOG00000003407)	CENPJ (ENSCPOG00000012145)	MPHOSPH8 (ENSCPOG00000002864)
Naked mole-rat female	MODERN SPECIES	25	LMNB1 (ENSHGLG00000004108) #15	ENSHGLG00000049826	TEX43 (ENSHGLG00000004450) #16	PHAX (ENSHGLG00000004831) #17	ENSHGLG00000020456	ENSHGLG00000037194	ALDH7A1 (ENSHGLG00000007013) #18	GRAMD3 (ENSHGLG00000007988) #19	ENSHGLG00000048613	ENSHGLG00000045729	ENSHGLG00000044491	ENSHGLG00000045823	ZNF608 (ENSHGLG00000015363) #20	ENSHGLG00000045496	CSNK1G3 (ENSHGLG00000014887) #21	CEP120 (ENSHGLG00000013236) #22	ENSHGLG00000046905	ENSHGLG00000015465	ENSHGLG00000044678	PRDM6 (ENSHGLG00000015857) #23	PPIC (ENSHGLG00000003798) #24	SNX24 (ENSHGLG00000044370) #25	SNX2 (ENSHGLG00000004121) #26	ENSHGLG00000004284	SNCAIP (ENSHGLG00000004400) #27	ENSHGLG00000005486 #28	ENSHGLG00000040922	ENSHGLG00000006947 #30	SGK196 (ENSHGLG00000000861)	FNTA (ENSHGLG00000000048)	ENSHGLG00000038726
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT01000000214434.B.b.f	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Cricetidae	ANCESTRAL SPECIES	18	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Northern American deer mouse	MODERN SPECIES	10	Ctxn3 (ENSPEMG00000030766) #10	ENSPEMG00000026741	Prrc1 (ENSPEMG00000009474) #11	Megf10 (ENSPEMG00000014062) #12	C330018D20Rik (ENSPEMG00000024261) #13	ENSPEMG00000030304	Marchf3 (ENSPEMG00000001664) #14	Lmnb1 (ENSPEMG00000021049) #15	Tex43 (ENSPEMG00000029586) #16	Phax (ENSPEMG00000011173) #17	Aldh7a1 (ENSPEMG00000005818) #18	Gramd3 (ENSPEMG00000000293) #19	ENSPEMG00000027705	Zfp608 (ENSPEMG00000009185) #20	Csnk1g3 (ENSPEMG00000019782) #21	Cep120 (ENSPEMG00000009773) #22	Prdm6 (ENSPEMG00000019671) #23	Ppic (ENSPEMG00000019562) #24	Snx24 (ENSPEMG00000019816) #25	Snx2 (ENSPEMG00000019987) #26	Sncaip (ENSPEMG00000013269) #27	Gykl1 (ENSPEMG00000019742)	1700034E13Rik (ENSPEMG00000011011) #28	ENSPEMG00000009439 #29	Lox (ENSPEMG00000009745) #30	Srfbp1 (ENSPEMG00000030711) #31	Ftmt (ENSPEMG00000012587) #32	ENSPEMG00000012557	Prr16 (ENSPEMG00000019646) #34	ENSPEMG00000012704	Pudp (ENSPEMG00000024589)
Cricetinae	ANCESTRAL SPECIES	14	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Chinese hamster chok1gshd	MODERN SPECIES	153	Ccdc192 (ENSCGRG00001017920)	Ctxn3 (ENSCGRG00001003792) #10	Prrc1 (ENSCGRG00001021725) #11	Megf10 (ENSCGRG00001016594) #12	C330018D20Rik (ENSCGRG00001000564) #13	Marchf3 (ENSCGRG00001018443) #14	Lmnb1 (ENSCGRG00001023736) #15	Tex43 (ENSCGRG00001000467) #16	Phax (ENSCGRG00001022020) #17	ENSCGRG00001012154 #18	ENSCGRG00001011295	Gramd3 (ENSCGRG00001014891) #19	ENSCGRG00001013902	Zfp608 (ENSCGRG00001015219) #20	Csnk1g3 (ENSCGRG00001024465) #21	Cep120 (ENSCGRG00001017499) #22	Prdm6 (ENSCGRG00001016821) #23	Ppic (ENSCGRG00001008818) #24	Snx24 (ENSCGRG00001011694) #25	ENSCGRG00001023240 #26	Sncaip (ENSCGRG00001013058) #27	Gykl1 (ENSCGRG00001001492)	1700034E13Rik (ENSCGRG00001001918) #28	Zfp474 (ENSCGRG00001002746)	Lox (ENSCGRG00001014607) #30	Srfbp1 (ENSCGRG00001000718) #31	Ftmt (ENSCGRG00001006087) #32	ENSCGRG00001012009	Prr16 (ENSCGRG00001005826) #34	ENSCGRG00001003744	Pudp (ENSCGRG00001004277)
Golden Hamster	MODERN SPECIES	634	Ccdc192 (ENSMAUG00000011938)	Ctxn3 (ENSMAUG00000010112) #10	Prrc1 (ENSMAUG00000011136) #11	Megf10 (ENSMAUG00000004517) #12	C330018D20Rik (ENSMAUG00000011803) #13	Marchf3 (ENSMAUG00000012056) #14	Lmnb1 (ENSMAUG00000010471) #15	Tex43 (ENSMAUG00000013359) #16	Phax (ENSMAUG00000014638) #17	Aldh7a1 (ENSMAUG00000001614) #18	Gramd3 (ENSMAUG00000012430) #19	ENSMAUG00000014738	ENSMAUG00000013888	Zfp608 (ENSMAUG00000014536) #20	Csnk1g3 (ENSMAUG00000015117) #21	Cep120 (ENSMAUG00000016424) #22	Prdm6 (ENSMAUG00000016287) #23	Ppic (ENSMAUG00000016808) #24	Snx24 (ENSMAUG00000017166) #25	ENSMAUG00000017250	Dpep3 (ENSMAUG00000017410)	Snx2 (ENSMAUG00000018379) #26	ENSMAUG00000004463 #27	Gykl1 (ENSMAUG00000005428)	1700034E13Rik (ENSMAUG00000007545) #28	Lox (ENSMAUG00000008060) #30	Srfbp1 (ENSMAUG00000009431) #31	Ftmt (ENSMAUG00000017687) #32	Prr16 (ENSMAUG00000009966) #34	Fam170a (ENSMAUG00000010368) #36	Hsd17b4 (ENSMAUG00000011187) #37
Mus	ANCESTRAL SPECIES	19	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000014753.g	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Mus_A	ANCESTRAL SPECIES	19	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000014753.g	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Mus_B	ANCESTRAL SPECIES	19	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000014753.g	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Mus_C	ANCESTRAL SPECIES	16	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000014753.g	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	1041													ENSNGAG00000003663	Zfp608 (ENSNGAG00000005351) #20	Csnk1g3 (ENSNGAG00000009095) #21	Cep120 (ENSNGAG00000013770) #22	Prdm6 (ENSNGAG00000014634) #23	Ppic (ENSNGAG00000015449) #24	ENSNGAG00000016507 #25	Snx2 (ENSNGAG00000017517) #26
Lesser Egyptian jerboa	MODERN SPECIES	168				Megf10 (ENSJJAG00000014323) #12	C330018D20Rik (ENSJJAG00000015949) #13	Marchf3 (ENSJJAG00000016326) #14	Lmnb1 (ENSJJAG00000016492) #15	ENSJJAG00000016539	ENSJJAG00000016790	Tex43 (ENSJJAG00000016971) #16	ENSJJAG00000017266 #17	Aldh7a1 (ENSJJAG00000018282) #18	Gramd3 (ENSJJAG00000020204) #19	Zfp608 (ENSJJAG00000021213) #20	Csnk1g3 (ENSJJAG00000021692) #21	Cep120 (ENSJJAG00000022675) #22	Prdm6 (ENSJJAG00000000894) #23	Ppic (ENSJJAG00000001551) #24	Snx24 (ENSJJAG00000005328) #25	Snx2 (ENSJJAG00000009054) #26	Sncaip (ENSJJAG00000010838) #27	ENSJJAG00000012299	1700034E13Rik (ENSJJAG00000012621) #28	Lox (ENSJJAG00000012805) #30	Srfbp1 (ENSJJAG00000013229) #31	Fbxo25 (ENSJJAG00000014014)	ENSJJAG00000016621	ENSJJAG00000017534	Hes7 (ENSJJAG00000009906)	Aloxe3 (ENSJJAG00000011820)	Alox12b (ENSJJAG00000015753)
Rabbit	MODERN SPECIES	14	ENSOCUG00000031199	ENSOCUG00000023531	CTXN3 (ENSOCUG00000007596) #10	PRRC1 (ENSOCUG00000012160) #11	MEGF10 (ENSOCUG00000003724) #12	C5orf63 (ENSOCUG00000015863) #13	MARCHF3 (ENSOCUG00000007506) #14	LMNB1 (ENSOCUG00000007499) #15	TEX43 (ENSOCUG00000022846) #16	PHAX (ENSOCUG00000010197) #17	ALDH7A1 (ENSOCUG00000010185) #18	GRAMD2B (ENSOCUG00000016248) #19	ZNF608 (ENSOCUG00000017068) #20	ENSOCUG00000036237	CSNK1G3 (ENSOCUG00000014821) #21	CEP120 (ENSOCUG00000005564) #22	PRDM6 (ENSOCUG00000003454) #23	PPIC (ENSOCUG00000012053) #24	SNX24 (ENSOCUG00000012046) #25	ENSOCUG00000036633	SNX2 (ENSOCUG00000013435) #26	SNCAIP (ENSOCUG00000008627) #27	ENSOCUG00000003318 #28	LOX (ENSOCUG00000003313) #30	SRFBP1 (ENSOCUG00000009556) #31	FTMT (ENSOCUG00000021440) #32	ENSOCUG00000023850 #33	ENSOCUG00000022384 #33	ENSOCUG00000023996 #33	PRR16 (ENSOCUG00000006501) #34	ENSOCUG00000003977
Primates	ANCESTRAL SPECIES	8	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115	ENSGT00940000154319.v	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.f.a #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a	ENSGT00940000162220 #36	ENSGT00940000158343 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.f.a #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000153339.a.b.b.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a	ENSGT00940000162220 #36
Pan	ANCESTRAL SPECIES	10	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.f.a #18	ENSGT00940000156980 #19	ENSGT00390000008732.a.a.b.q.b	ENSGT00910000147816	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000153339.a.b.b.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a	ENSGT00940000162220 #36
Bonobo	MODERN SPECIES	18	ENSPPAG00000034513	MEGF10 (ENSPPAG00000038100) #12	ENSPPAG00000015080	ENSPPAG00000043875 #13	MARCHF3 (ENSPPAG00000030628) #14	LMNB1 (ENSPPAG00000039374) #15	TEX43 (ENSPPAG00000041160) #16	PHAX (ENSPPAG00000013754) #17	ALDH7A1 (ENSPPAG00000036939) #18	GRAMD2B (ENSPPAG00000041531) #19	ENSPPAG00000032901	ENSPPAG00000018777	ZNF608 (ENSPPAG00000035692) #20	CSNK1G3 (ENSPPAG00000028193) #21	ENSPPAG00000031140	CEP120 (ENSPPAG00000032492) #22	ENSPPAG00000041868 #23	PPIC (ENSPPAG00000042661) #24	ENSPPAG00000040437 #25	SNX2 (ENSPPAG00000031636) #26	ENSPPAG00000029265	SNCAIP (ENSPPAG00000029373) #27	ENSPPAG00000028698 #28	ZNF474 (ENSPPAG00000024398)	LOX (ENSPPAG00000035643) #30	SRFBP1 (ENSPPAG00000035848) #31	FTMT (ENSPPAG00000022287) #32	PRR16 (ENSPPAG00000026111) #34	ENSPPAG00000028133	FAM170A (ENSPPAG00000035991) #36	HSD17B4 (ENSPPAG00000041825) #37
Chimpanzee	MODERN SPECIES	18	MEGF10 (ENSPTRG00000017193) #12	ENSPTRG00000048267	C5H5orf63 (ENSPTRG00000048256) #13	MARCHF3 (ENSPTRG00000017190) #14	LMNB1 (ENSPTRG00000017188) #15	ENSPTRG00000050022	TEX43 (ENSPTRG00000022761) #16	PHAX (ENSPTRG00000017186) #17	ALDH7A1 (ENSPTRG00000051135) #18	GRAMD2B (ENSPTRG00000017184) #19	ENSPTRG00000043676	ENSPTRG00000050689	ZNF608 (ENSPTRG00000017183) #20	CSNK1G3 (ENSPTRG00000017182) #21	ENSPTRG00000051393	CEP120 (ENSPTRG00000017181) #22	PRDM6 (ENSPTRG00000017180) #23	PPIC (ENSPTRG00000017179) #24	SNX24 (ENSPTRG00000048492) #25	SNX2 (ENSPTRG00000028644) #26	ENSPTRG00000049444	SNCAIP (ENSPTRG00000017175) #27	ENSPTRG00000052865 #28	LOX (ENSPTRG00000017173) #30	SRFBP1 (ENSPTRG00000017172) #31	FTMT (ENSPTRG00000017171) #32	PRR16 (ENSPTRG00000017170) #34	ENSPTRG00000047188	FAM170A (ENSPTRG00000017169) #36	HSD17B4 (ENSPTRG00000017168) #37	TNFAIP8 (ENSPTRG00000017167)
Human	MODERN SPECIES	17	FBN2 (ENSG00000138829) #8	SLC12A2 (ENSG00000064651) #9	CCDC192 (ENSG00000230561)	CTXN3 (ENSG00000205279) #10	PRRC1 (ENSG00000164244) #11	MEGF10 (ENSG00000145794) #12	C5orf63 (ENSG00000164241) #13	MARCHF3 (ENSG00000173926) #14	LMNB1 (ENSG00000113368) #15	TEX43 (ENSG00000196900) #16	PHAX (ENSG00000164902) #17	ALDH7A1 (ENSG00000164904) #18	GRAMD2B (ENSG00000155324) #19	ZNF608 (ENSG00000168916) #20	CSNK1G3 (ENSG00000151292) #21	CEP120 (ENSG00000168944) #22	PRDM6 (ENSG00000061455) #23	PPIC (ENSG00000168938) #24	SNX24 (ENSG00000064652) #25	SNX2 (ENSG00000205302) #26	SNCAIP (ENSG00000064692) #27	ENSG00000250803 #28	ZNF474 (ENSG00000164185)	LOX (ENSG00000113083) #30	SRFBP1 (ENSG00000151304) #31	FTMT (ENSG00000181867) #32	PRR16 (ENSG00000184838) #34	FAM170A (ENSG00000164334) #36	HSD17B4 (ENSG00000133835) #37	TNFAIP8 (ENSG00000145779)	DMXL1 (ENSG00000172869)
Gorilla	MODERN SPECIES	18	CTXN3 (ENSGGOG00000036661) #10	PRRC1 (ENSGGOG00000010195) #11	MEGF10 (ENSGGOG00000006505) #12	ENSGGOG00000022731	ENSGGOG00000006111 #13	MARCHF3 (ENSGGOG00000000905) #14	LMNB1 (ENSGGOG00000007999) #15	ENSGGOG00000010327	PHAX (ENSGGOG00000013877) #17	ENSGGOG00000040337 #18	GRAMD2B (ENSGGOG00000003435) #19	ENSGGOG00000037025	ZNF608 (ENSGGOG00000015745) #20	CSNK1G3 (ENSGGOG00000015968) #21	ENSGGOG00000022566	CEP120 (ENSGGOG00000008568) #22	PRDM6 (ENSGGOG00000036936) #23	PPIC (ENSGGOG00000001121) #24	SNX24 (ENSGGOG00000011673) #25	ENSGGOG00000002409 #26	ENSGGOG00000037533	SNCAIP (ENSGGOG00000015443) #27	ENSGGOG00000041793	ZNF474 (ENSGGOG00000008193)	LOX (ENSGGOG00000024751) #30	SRFBP1 (ENSGGOG00000007725) #31	FTMT (ENSGGOG00000001510) #32	PRR16 (ENSGGOG00000016737) #34	ENSGGOG00000027672	FAM170A (ENSGGOG00000009985) #36	HSD17B4 (ENSGGOG00000002010) #37
Orangutan	MODERN SPECIES	18	SLC12A2 (ENSPPYG00000015739) #9	CCDC192 (ENSPPYG00000039317)	CTXN3 (ENSPPYG00000015738) #10	PRRC1 (ENSPPYG00000015737) #11	MEGF10 (ENSPPYG00000015735) #12	ENSPPYG00000015732 #13	MARCHF3 (ENSPPYG00000035472) #14	LMNB1 (ENSPPYG00000015729) #15	TEX43 (ENSPPYG00000015728) #16	PHAX (ENSPPYG00000015726) #17	ENSPPYG00000025927 #18	GRAMD2B (ENSPPYG00000015725) #19	ZNF608 (ENSPPYG00000015724) #20	ENSPPYG00000041402	CSNK1G3 (ENSPPYG00000015723) #21	CEP120 (ENSPPYG00000015721) #22	PRDM6 (ENSPPYG00000034187) #23	PPIC (ENSPPYG00000041630) #24	SNX24 (ENSPPYG00000015719) #25	SNX2 (ENSPPYG00000015718) #26	SNCAIP (ENSPPYG00000015717) #27	ENSPPYG00000039614 #28	ZNF474 (ENSPPYG00000015716)	LOX (ENSPPYG00000015715) #30	SRFBP1 (ENSPPYG00000015714) #31	FTMT (ENSPPYG00000015713) #32	PRR16 (ENSPPYG00000015712) #34	FAM170A (ENSPPYG00000015711) #36	HSD17B4 (ENSPPYG00000015710) #37	TNFAIP8 (ENSPPYG00000015709)	DMXL1 (ENSPPYG00000015708)
Gibbon	MODERN SPECIES	11	CTXN3 (ENSNLEG00000036313) #10	PRRC1 (ENSNLEG00000012281) #11	ENSNLEG00000028579	MEGF10 (ENSNLEG00000012271) #12	ENSNLEG00000012269 #13	MARCHF3 (ENSNLEG00000012261) #14	LMNB1 (ENSNLEG00000012250) #15	TEX43 (ENSNLEG00000012247) #16	ENSNLEG00000030757	PHAX (ENSNLEG00000012242) #17	ALDH7A1 (ENSNLEG00000012180) #18	GRAMD2B (ENSNLEG00000012129) #19	ENSNLEG00000028602	ZNF608 (ENSNLEG00000012117) #20	CSNK1G3 (ENSNLEG00000012089) #21	CEP120 (ENSNLEG00000012069) #22	PRDM6 (ENSNLEG00000012064) #23	PPIC (ENSNLEG00000012061) #24	SNX24 (ENSNLEG00000012059) #25	ENSNLEG00000031106 #26	ENSNLEG00000029668	SNCAIP (ENSNLEG00000011998) #27	ENSNLEG00000011997 #28	LOX (ENSNLEG00000011966) #30	SRFBP1 (ENSNLEG00000011949) #31	ENSNLEG00000032909	FTMT (ENSNLEG00000018895) #32	ENSNLEG00000027706	ENSNLEG00000031918	PRR16 (ENSNLEG00000011947) #34	ENSNLEG00000034199
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00940000167145	ENSGT00390000006935 #16	ENSGT00390000011084.g #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115.f	ENSGT00940000154319.v	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a
Rhinopithecus	ANCESTRAL SPECIES	427															ENSGT00940000160646.e #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31
Golden snub-nosed monkey	MODERN SPECIES	1323															CSNK1G3 (ENSRROG00000036057) #21	CEP120 (ENSRROG00000030012) #22
Black snub-nosed monkey	MODERN SPECIES	2019														ENSRBIG00000009293	CSNK1G3 (ENSRBIG00000044549) #21	CEP120 (ENSRBIG00000005638) #22	PRDM6 (ENSRBIG00000043372) #23	PPIC (ENSRBIG00000041146) #24	SNX24 (ENSRBIG00000039131) #25	SNX2 (ENSRBIG00000028480) #26	ENSRBIG00000017677	SNCAIP (ENSRBIG00000033082) #27	ENSRBIG00000034381 #28	LOX (ENSRBIG00000043026) #30	SRFBP1 (ENSRBIG00000031064) #31
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00940000167145	ENSGT00390000006935 #16	ENSGT00390000011084.g #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115.f	ENSGT00940000154319.v	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000016262.j.a	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34
Vervet Monkey	MODERN SPECIES	15	FBN2 (ENSCSAG00000014330) #8	SLC12A2 (ENSCSAG00000014424) #9	CTXN3 (ENSCSAG00000000506) #10	PRRC1 (ENSCSAG00000014434) #11	MEGF10 (ENSCSAG00000014452) #12	C5orf63 (ENSCSAG00000014468) #13	MARCHF3 (ENSCSAG00000014474) #14	LMNB1 (ENSCSAG00000014483) #15	TEX43 (ENSCSAG00000014492) #16	PHAX (ENSCSAG00000014510) #17	ALDH7A1 (ENSCSAG00000014524) #18	GRAMD2B (ENSCSAG00000014535) #19	ZNF608 (ENSCSAG00000014544) #20	ENSCSAG00000000507	CSNK1G3 (ENSCSAG00000014555) #21	CEP120 (ENSCSAG00000014571) #22	PRDM6 (ENSCSAG00000014599) #23	PPIC (ENSCSAG00000014607) #24	ENSCSAG00000000508	SNX24 (ENSCSAG00000014613) #25	SNX2 (ENSCSAG00000014620) #26	SNCAIP (ENSCSAG00000014626) #27	ZNF474 (ENSCSAG00000000509)	LOX (ENSCSAG00000014633) #30	SRFBP1 (ENSCSAG00000014636) #31	FTMT (ENSCSAG00000000510) #32	PRR16 (ENSCSAG00000000511) #34	FAM170A (ENSCSAG00000014643) #36	HSD17B4 (ENSCSAG00000014659) #37	TNFAIP8 (ENSCSAG00000014662)	DMXL1 (ENSCSAG00000014679)
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00940000167145	ENSGT00390000006935 #16	ENSGT00390000011084.g #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115.f	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000016262.j.a	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a
Macaca	ANCESTRAL SPECIES	7	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084.g #17	ENSGT00940000154938.g.a #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115.f	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a	ENSGT00940000162220 #36	ENSGT00940000158343 #37
Crab-eating macaque	MODERN SPECIES	16	ENSMFAG00000063020	CCDC192 (ENSMFAG00000041916)	PRRC1 (ENSMFAG00000044127) #11	MEGF10 (ENSMFAG00000042999) #12	ENSMFAG00000009790 #13	MARCHF3 (ENSMFAG00000046331) #14	LMNB1 (ENSMFAG00000033746) #15	TEX43 (ENSMFAG00000042605) #16	PHAX (ENSMFAG00000049514) #17	ENSMFAG00000045191 #18	ENSMFAG00000055240	GRAMD2B (ENSMFAG00000044063) #19	ZNF608 (ENSMFAG00000043739) #20	ENSMFAG00000063425	CSNK1G3 (ENSMFAG00000031684) #21	CEP120 (ENSMFAG00000000165) #22	ENSMFAG00000037648	PRDM6 (ENSMFAG00000002537) #23	PPIC (ENSMFAG00000033147) #24	SNX2 (ENSMFAG00000029999) #26	SNCAIP (ENSMFAG00000033060) #27	ENSMFAG00000061686 #28	ZNF474 (ENSMFAG00000056098)	LOX (ENSMFAG00000054298) #30	SRFBP1 (ENSMFAG00000031263) #31	PRR16 (ENSMFAG00000003359) #34	ENSMFAG00000002111	HSD17B4 (ENSMFAG00000039507) #37	TNFAIP8 (ENSMFAG00000042688)	DMXL1 (ENSMFAG00000040275)	ENSMFAG00000043561
Pig-tailed macaque	MODERN SPECIES	295					ENSMNEG00000042326	ENSMNEG00000029316	ENSMNEG00000043529 #13	MARCHF3 (ENSMNEG00000033483) #14	LMNB1 (ENSMNEG00000034728) #15	ENSMNEG00000037182	ENSMNEG00000045186 #17	ENSMNEG00000027216 #18	GRAMD2B (ENSMNEG00000043427) #19	ZNF608 (ENSMNEG00000033840) #20	CSNK1G3 (ENSMNEG00000032668) #21	CEP120 (ENSMNEG00000035699) #22	ENSMNEG00000036700	PRDM6 (ENSMNEG00000036672) #23	PPIC (ENSMNEG00000043595) #24	ENSMNEG00000041517	SNX24 (ENSMNEG00000039496) #25	SNX2 (ENSMNEG00000042443) #26	SNCAIP (ENSMNEG00000037014) #27	ENSMNEG00000039560 #28	LOX (ENSMNEG00000042212) #30	SRFBP1 (ENSMNEG00000040870) #31	PRR16 (ENSMNEG00000042635) #34	ENSMNEG00000043573	ENSMNEG00000043297	FAM170A (ENSMNEG00000038508) #36	HSD17B4 (ENSMNEG00000034446) #37
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00940000167145	ENSGT00390000006935 #16	ENSGT00390000011084.g #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115.f	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000016262.j.a	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a
Olive baboon	MODERN SPECIES	15	CTXN3 (ENSPANG00000003662) #10	PRRC1 (ENSPANG00000003082) #11	MEGF10 (ENSPANG00000006534) #12	MARCHF3 (ENSPANG00000006160) #14	ENSPANG00000031348 #13	LMNB1 (ENSPANG00000011682) #15	ENSPANG00000033076	TEX43 (ENSPANG00000022176) #16	PHAX (ENSPANG00000010164) #17	ALDH7A1 (ENSPANG00000012208) #18	GRAMD2B (ENSPANG00000004678) #19	ENSPANG00000045932	ZNF608 (ENSPANG00000011668) #20	ENSPANG00000042763	CSNK1G3 (ENSPANG00000010942) #21	CEP120 (ENSPANG00000008620) #22	ENSPANG00000045596	PRDM6 (ENSPANG00000020936) #23	PPIC (ENSPANG00000024146) #24	SNX24 (ENSPANG00000007041) #25	SNX2 (ENSPANG00000011931) #26	ENSPANG00000047652	SNCAIP (ENSPANG00000003083) #27	ENSPANG00000031039 #28	ZNF474 (ENSPANG00000048097)	LOX (ENSPANG00000043820) #30	SRFBP1 (ENSPANG00000003799) #31	FTMT (ENSPANG00000042351) #32	PRR16 (ENSPANG00000030898) #34	ENSPANG00000042421	FAM170A (ENSPANG00000008126) #36
Cercopithecinae_d	ANCESTRAL SPECIES	18	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000018078.n.b	ENSGT00390000006935 #16	ENSGT00390000011084.g #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115.f	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000016262.j.a	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34
Drill	MODERN SPECIES	962												ENSMLEG00000027303	ZNF608 (ENSMLEG00000008940) #20	ENSMLEG00000001064	CSNK1G3 (ENSMLEG00000042930) #21	CEP120 (ENSMLEG00000041090) #22	ENSMLEG00000032179	PRDM6 (ENSMLEG00000038857) #23	PPIC (ENSMLEG00000033596) #24	SNX24 (ENSMLEG00000009535) #25	SNX2 (ENSMLEG00000020946) #26	ENSMLEG00000031035	SNCAIP (ENSMLEG00000031005) #27	ENSMLEG00000041857 #28	LOX (ENSMLEG00000033676) #30	SRFBP1 (ENSMLEG00000038679) #31	FTMT (ENSMLEG00000028728) #32
Sooty mangabey	MODERN SPECIES	309	CTXN3 (ENSCATG00000018324) #10	PRRC1 (ENSCATG00000031589) #11	MEGF10 (ENSCATG00000045270) #12	ENSCATG00000033679 #13	MARCHF3 (ENSCATG00000015290) #14	LMNB1 (ENSCATG00000034925) #15	ENSCATG00000045028	TEX43 (ENSCATG00000044525) #16	ENSCATG00000002341	ENSCATG00000019943 #17	ALDH7A1 (ENSCATG00000035683) #18	GRAMD2B (ENSCATG00000041939) #19	ENSCATG00000033483	ZNF608 (ENSCATG00000031619) #20	CSNK1G3 (ENSCATG00000036946) #21	CEP120 (ENSCATG00000029280) #22	ENSCATG00000035899	PRDM6 (ENSCATG00000031588) #23	PPIC (ENSCATG00000030659) #24	ENSCATG00000030459	SNX24 (ENSCATG00000041438) #25	SNX2 (ENSCATG00000012651) #26	SNCAIP (ENSCATG00000031538) #27	ENSCATG00000041760 #28	LOX (ENSCATG00000041361) #30	SRFBP1 (ENSCATG00000040904) #31	PRR16 (ENSCATG00000045055) #34	ENSCATG00000043895
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.k.a #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115	ENSGT00940000154319.v.t	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478.e #31	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Cebidae	ANCESTRAL SPECIES	6	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.k.a #18	ENSGT00940000156980 #19	ENSGT01020000230401.a.a.a.i.a.a.k.a	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478.e #31	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.k.a #18	ENSGT00940000156980 #19	ENSGT01020000230401.a.a.a.i.a.a.k.a	ENSGT00390000008748.a #20	ENSGT00940000157258.m.b	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478.e #31	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Bolivian squirrel monkey	MODERN SPECIES	43	MEGF10 (ENSSBOG00000019175) #12	ENSSBOG00000030929	ENSSBOG00000035116	C5orf63 (ENSSBOG00000000968) #13	MARCHF3 (ENSSBOG00000023895) #14	LMNB1 (ENSSBOG00000026468) #15	TEX43 (ENSSBOG00000023843) #16	PHAX (ENSSBOG00000019981) #17	ENSSBOG00000032179 #18	GRAMD2B (ENSSBOG00000034731) #19	ENSSBOG00000024091	ZNF608 (ENSSBOG00000023375) #20	ENSSBOG00000022267	ENSSBOG00000027659	CSNK1G3 (ENSSBOG00000033420) #21	CEP120 (ENSSBOG00000032810) #22	PRDM6 (ENSSBOG00000036108) #23	ENSSBOG00000032176	PPIC (ENSSBOG00000035731) #24	SNX24 (ENSSBOG00000027967) #25	SNX2 (ENSSBOG00000023789) #26	ENSSBOG00000032671	SNCAIP (ENSSBOG00000030798) #27	ENSSBOG00000033668 #28	ZNF474 (ENSSBOG00000021556)	LOX (ENSSBOG00000025774) #30	ENSSBOG00000015464 #31	PRR16 (ENSSBOG00000031473) #34	FAM170A (ENSSBOG00000025629) #36	HSD17B4 (ENSSBOG00000023708) #37	TNFAIP8 (ENSSBOG00000022853)
Capuchin	MODERN SPECIES	738														CSNK1G3 (ENSCCAG00000035487) #21	METAP2 (ENSCCAG00000030483)	CEP120 (ENSCCAG00000033353) #22
Marmoset	MODERN SPECIES	11	LMNB1 (ENSCJAG00000019144) #15	ENSCJAG00000085687	TEX43 (ENSCJAG00000011071) #16	ENSCJAG00000082285	PHAX (ENSCJAG00000055757) #17	ENSCJAG00000011102 #18	ENSCJAG00000069820	ENSCJAG00000008280 #19	ENSCJAG00000073070 #18	ENSCJAG00000085599 #19	ENSCJAG00000022376	ENSCJAG00000068510	ENSCJAG00000056580	ZNF608 (ENSCJAG00000008225) #20	CSNK1G3 (ENSCJAG00000017348) #21	CEP120 (ENSCJAG00000017322) #22	ENSCJAG00000074435	PRDM6 (ENSCJAG00000017318) #23	PPIC (ENSCJAG00000065144) #24	SNX2 (ENSCJAG00000017239) #26	ENSCJAG00000076221	ENSCJAG00000039670	SNCAIP (ENSCJAG00000017196) #27	ENSCJAG00000081497 #28	LOX (ENSCJAG00000043472) #30	SRFBP1 (ENSCJAG00000017177) #31	ENSCJAG00000077985	FTMT (ENSCJAG00000074582) #32	ENSCJAG00000071302	PRR16 (ENSCJAG00000017168) #34	ENSCJAG00000057228
Mas night monkey	MODERN SPECIES	966	ENSANAG00000037891 #13	MARCHF3 (ENSANAG00000021896) #14	LMNB1 (ENSANAG00000006147) #15	ENSANAG00000017917	ENSANAG00000018071	TEX43 (ENSANAG00000020432) #16	ENSANAG00000022879 #17	ENSANAG00000024922 #18	ENSANAG00000026615	GRAMD2B (ENSANAG00000025780) #19	ENSANAG00000021766	ENSANAG00000021414	ZNF608 (ENSANAG00000026653) #20	ENSANAG00000022607	CSNK1G3 (ENSANAG00000024113) #21	CEP120 (ENSANAG00000027276) #22	ENSANAG00000021690	PRDM6 (ENSANAG00000025903) #23	PPIC (ENSANAG00000022145) #24	SNX24 (ENSANAG00000023745) #25	SNX2 (ENSANAG00000023132) #26	ENSANAG00000026792	SNCAIP (ENSANAG00000023615) #27	ENSANAG00000026917 #28	LOX (ENSANAG00000022215) #30	SRFBP1 (ENSANAG00000022485) #31	PRR16 (ENSANAG00000022482) #34	ENSANAG00000022201	FAM170A (ENSANAG00000022413) #36	HSD17B4 (ENSANAG00000026074) #37	TNFAIP8 (ENSANAG00000023898)
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Mouse lemur	MODERN SPECIES	3															ENSMICG00000014016 #21	CEP120 (ENSMICG00000047467) #22	PRDM6 (ENSMICG00000046260) #23	PPIC (ENSMICG00000001712) #24	SNX24 (ENSMICG00000044497) #25	SNX2 (ENSMICG00000001700) #26	SNCAIP (ENSMICG00000016502) #27	ENSMICG00000000238 #28	LOX (ENSMICG00000044306) #30	SRFBP1 (ENSMICG00000042923) #31	PRR16 (ENSMICG00000044812) #34	FAM170A (ENSMICG00000017038) #36	HSD17B4 (ENSMICG00000017025) #37	TNFAIP8 (ENSMICG00000042871)	DMXL1 (ENSMICG00000015937)	ENSMICG00000045935	ENSMICG00000042755
Lemuriformes_a	ANCESTRAL SPECIES	84	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Coquerels sifaka	MODERN SPECIES	989	ECRG4 (ENSPCOG00000014746)	NCK2 (ENSPCOG00000008931)	FHL2 (ENSPCOG00000023972)	C2orf49 (ENSPCOG00000019511)	TGFBRAP1 (ENSPCOG00000015488)	MRPS9 (ENSPCOG00000018743)	C5orf63 (ENSPCOG00000019707) #13	MARCHF3 (ENSPCOG00000026764) #14	LMNB1 (ENSPCOG00000015630) #15	TEX43 (ENSPCOG00000014490) #16	PHAX (ENSPCOG00000015714) #17	ALDH7A1 (ENSPCOG00000013532) #18	GRAMD2B (ENSPCOG00000008870) #19	ZNF608 (ENSPCOG00000018200) #20	CSNK1G3 (ENSPCOG00000022062) #21	CEP120 (ENSPCOG00000023766) #22	PRDM6 (ENSPCOG00000016453) #23	PPIC (ENSPCOG00000018909) #24	SNX24 (ENSPCOG00000015393) #25	SNX2 (ENSPCOG00000022160) #26	SNCAIP (ENSPCOG00000017712) #27	ENSPCOG00000024311 #28	ENSPCOG00000006366 #29	LOX (ENSPCOG00000021250) #30	SRFBP1 (ENSPCOG00000027331) #31
Greater bamboo lemur	MODERN SPECIES	712													ENSPSMG00000012515	ZNF608 (ENSPSMG00000012504) #20	CSNK1G3 (ENSPSMG00000012466) #21	CEP120 (ENSPSMG00000012366) #22	PRDM6 (ENSPSMG00000012302) #23	PPIC (ENSPSMG00000012295) #24	SNX24 (ENSPSMG00000012284) #25	SNX2 (ENSPSMG00000012259) #26
Bushbaby	MODERN SPECIES	275											ENSOGAG00000004562 #17	ALDH7A1 (ENSOGAG00000002475) #18	ZNF608 (ENSOGAG00000002389) #20	ENSOGAG00000034390	ENSOGAG00000011587 #21	CEP120 (ENSOGAG00000000278) #22	PPIC (ENSOGAG00000028930) #24	SNX24 (ENSOGAG00000005170) #25	SNX2 (ENSOGAG00000016473) #26	SNCAIP (ENSOGAG00000006904) #27	ENSOGAG00000029375 #28	LOX (ENSOGAG00000027586) #30	SRFBP1 (ENSOGAG00000032423) #31	FTMT (ENSOGAG00000006899) #32
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Chacoan peccary	MODERN SPECIES	204	FBN2 (ENSCWAG00000002872) #8	SLC12A2 (ENSCWAG00000002750) #9	CCDC192 (ENSCWAG00000002712)	CTXN3 (ENSCWAG00000002703) #10	PRRC1 (ENSCWAG00000002691) #11	MEGF10 (ENSCWAG00000002652) #12	C5orf63 (ENSCWAG00000002640) #13	MARCHF3 (ENSCWAG00000002637) #14	LMNB1 (ENSCWAG00000002624) #15	TEX43 (ENSCWAG00000002616) #16	PHAX (ENSCWAG00000002605) #17	ALDH7A1 (ENSCWAG00000002560) #18	GRAMD2B (ENSCWAG00000002485) #19	ZNF608 (ENSCWAG00000002430) #20	CSNK1G3 (ENSCWAG00000002362) #21	CEP120 (ENSCWAG00000002325) #22	PRDM6 (ENSCWAG00000002308) #23	PPIC (ENSCWAG00000002296) #24	SNX24 (ENSCWAG00000002285) #25	SNX2 (ENSCWAG00000002253) #26	SNCAIP (ENSCWAG00000002071) #27	ENSCWAG00000002040 #28	ENSCWAG00000002029 #29	LOX (ENSCWAG00000002021) #30	SRFBP1 (ENSCWAG00000002002) #31	FTMT (ENSCWAG00000001994) #32	ENSCWAG00000001983 #33	PRR16 (ENSCWAG00000001973) #34	ENSCWAG00000001965	FAM170A (ENSCWAG00000001952) #36	HSD17B4 (ENSCWAG00000001921) #37
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000168043.a	ENSGT00910000144204.a #34	ENSGT00940000155210.a.b.v	ENSGT00940000155118.o.a.a	ENSGT00940000162220 #36
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000168043.a	ENSGT00910000144204.a #34	ENSGT00940000155210.a.b.v	ENSGT00940000155118.o.a.a	ENSGT00940000162220 #36
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000168043.a	ENSGT00910000144204.a #34	ENSGT00940000155210.a.b.v	ENSGT00940000155118.o.a.a	ENSGT00940000162220 #36
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01010000229395	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000010423	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000168043.a	ENSGT00910000144204.a #34	ENSGT00940000155210.a.b.v	ENSGT00940000155118.o.a.a
Narwhal	MODERN SPECIES	298	CTXN3 (ENSMMNG00015003050) #10	PRRC1 (ENSMMNG00015003018) #11	MEGF10 (ENSMMNG00015002957) #12	C5orf63 (ENSMMNG00015002919) #13	MARCHF3 (ENSMMNG00015002904) #14	LMNB1 (ENSMMNG00015002879) #15	TEX43 (ENSMMNG00015002863) #16	PHAX (ENSMMNG00015002845) #17	ENSMMNG00015002838	ALDH7A1 (ENSMMNG00015002788) #18	GRAMD2B (ENSMMNG00015002725) #19	ENSMMNG00015002684	ZNF608 (ENSMMNG00015002658) #20	ENSMMNG00015002643	CSNK1G3 (ENSMMNG00015002598) #21	CEP120 (ENSMMNG00015002509) #22	PRDM6 (ENSMMNG00015002473) #23	PPIC (ENSMMNG00015002437) #24	ENSMMNG00015002420	SNX24 (ENSMMNG00015002405) #25	SNX2 (ENSMMNG00015002357) #26	SNCAIP (ENSMMNG00015002285) #27	ENSMMNG00015002236 #28	ENSMMNG00015002209 #29	LOX (ENSMMNG00015002189) #30	SRFBP1 (ENSMMNG00015002167) #31	FTMT (ENSMMNG00015002152) #32	ENSMMNG00015002139	PRR16 (ENSMMNG00015002119) #34	ENSMMNG00015002101	ENSMMNG00015002089
Beluga whale	MODERN SPECIES	34	SLC12A2 (ENSDLEG00000001487) #9	CTXN3 (ENSDLEG00000001461) #10	PRRC1 (ENSDLEG00000001446) #11	MEGF10 (ENSDLEG00000001392) #12	C5orf63 (ENSDLEG00000001377) #13	MARCHF3 (ENSDLEG00000001373) #14	LMNB1 (ENSDLEG00000001365) #15	TEX43 (ENSDLEG00000001350) #16	PHAX (ENSDLEG00000001334) #17	ENSDLEG00000001317	ALDH7A1 (ENSDLEG00000001292) #18	GRAMD2B (ENSDLEG00000001243) #19	ENSDLEG00000001219	ZNF608 (ENSDLEG00000001189) #20	CSNK1G3 (ENSDLEG00000001111) #21	CEP120 (ENSDLEG00000001039) #22	PRDM6 (ENSDLEG00000000998) #23	PPIC (ENSDLEG00000000984) #24	ENSDLEG00000000979	SNX24 (ENSDLEG00000000928) #26	SNCAIP (ENSDLEG00000000831) #27	ENSDLEG00000000794 #28	ENSDLEG00000000779 #29	LOX (ENSDLEG00000000763) #30	SRFBP1 (ENSDLEG00000000750) #31	FTMT (ENSDLEG00000000741) #32	ENSDLEG00000000733	PRR16 (ENSDLEG00000000718) #34	ENSDLEG00000000709	ENSDLEG00000000704	ENSDLEG00000000697
Vaquita	MODERN SPECIES	14	CCDC192 (ENSPSNG00000002777)	ENSPSNG00000002796	CTXN3 (ENSPSNG00000002807) #10	PRRC1 (ENSPSNG00000002837) #11	MEGF10 (ENSPSNG00000002874) #12	C5orf63 (ENSPSNG00000002911) #13	MARCHF3 (ENSPSNG00000002931) #14	LMNB1 (ENSPSNG00000002954) #15	TEX43 (ENSPSNG00000002968) #16	PHAX (ENSPSNG00000002980) #17	ENSPSNG00000002992	ALDH7A1 (ENSPSNG00000003009) #18	GRAMD2B (ENSPSNG00000003061) #19	ZNF608 (ENSPSNG00000003121) #20	CSNK1G3 (ENSPSNG00000003171) #21	CEP120 (ENSPSNG00000003259) #22	PRDM6 (ENSPSNG00000003380) #23	PPIC (ENSPSNG00000003396) #24	SNX24 (ENSPSNG00000003412) #25	SNX2 (ENSPSNG00000003442) #26	SNCAIP (ENSPSNG00000003486) #27	ENSPSNG00000003567 #28	ENSPSNG00000003575 #29	LOX (ENSPSNG00000003588) #30	SRFBP1 (ENSPSNG00000003607) #31	FTMT (ENSPSNG00000003615) #32	ENSPSNG00000003622	PRR16 (ENSPSNG00000003649) #34	ENSPSNG00000003662	ENSPSNG00000003671	FAM170A (ENSPSNG00000003684) #36
Dolphin	MODERN SPECIES	6856																CEP120 (ENSTTRG00000012743) #22
Sperm whale	MODERN SPECIES	19	SLC12A2 (ENSPCTG00005002734) #9	CCDC192 (ENSPCTG00005002711)	CTXN3 (ENSPCTG00005002697) #10	PRRC1 (ENSPCTG00005002671) #11	MEGF10 (ENSPCTG00005002609) #12	C8H5orf63 (ENSPCTG00005002582) #13	MARCH3 (ENSPCTG00005002568) #14	LMNB1 (ENSPCTG00005002549) #15	TEX43 (ENSPCTG00005002533) #16	PHAX (ENSPCTG00005002524) #17	ALDH7A1 (ENSPCTG00005002377) #18	GRAMD2B (ENSPCTG00005002243) #19	ENSPCTG00005002207	ZNF608 (ENSPCTG00005002176) #20	CSNK1G3 (ENSPCTG00005002111) #21	CEP120 (ENSPCTG00005002011) #22	PRDM6 (ENSPCTG00005001984) #23	PPIC (ENSPCTG00005001957) #24	SNX24 (ENSPCTG00005001924) #25	SNX2 (ENSPCTG00005001899) #26	SNCAIP (ENSPCTG00005001832) #27	ENSPCTG00005001807 #28	ENSPCTG00005001795 #29	LOX (ENSPCTG00005001770) #30	SRFBP1 (ENSPCTG00005001750) #31	FTMT (ENSPCTG00005001737) #32	ENSPCTG00005001726	PRR16 (ENSPCTG00005001711) #34	ENSPCTG00005001702	ENSPCTG00005001696	ENSPCTG00005001691
Blue whale	MODERN SPECIES	14	SLC12A2 (ENSBMSG00010014581) #9	CCDC192 (ENSBMSG00010014492)	CTXN3 (ENSBMSG00010014463) #10	PRRC1 (ENSBMSG00010014415) #11	MEGF10 (ENSBMSG00010014241) #12	C5orf63 (ENSBMSG00010014202) #13	MARCHF3 (ENSBMSG00010014171) #14	LMNB1 (ENSBMSG00010014134) #15	TEX43 (ENSBMSG00010014103) #16	ENSBMSG00010014077 #17	ENSBMSG00010013972 #18	GRAMD2B (ENSBMSG00010013850) #19	ENSBMSG00010013785	ZNF608 (ENSBMSG00010013767) #20	CSNK1G3 (ENSBMSG00010013652) #21	CEP120 (ENSBMSG00010013600) #22	PRDM6 (ENSBMSG00010013580) #23	PPIC (ENSBMSG00010013569) #24	SNX24 (ENSBMSG00010013560) #25	SNX2 (ENSBMSG00010013528) #26	SNCAIP (ENSBMSG00010013437) #27	ENSBMSG00010013387 #28	ENSBMSG00010013378	LOX (ENSBMSG00010013366) #30	SRFBP1 (ENSBMSG00010013357) #31	FTMT (ENSBMSG00010013345) #32	PRR16 (ENSBMSG00010013320) #34	ENSBMSG00010013310	ENSBMSG00010013304	ENSBMSG00010013295	FAM170A (ENSBMSG00010013274) #36
Pecora	ANCESTRAL SPECIES		ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Bovidae	ANCESTRAL SPECIES		ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000153288.a.b.a.a	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00510000047104.pb.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.b.c.a #28	ENSGT00530000064208.a.b #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000001440.a.b	ENSGT00940000162220 #36
Bovinae	ANCESTRAL SPECIES	2	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000153288.a.b.a.a	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000009693.c.a.b	ENSGT00390000008748.a #20	ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.b	ENSGT00940000160646 #21	ENSGT00510000047104.pb.a.a	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.c.a #28	ENSGT00530000064208.a.b #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00950000182810.A.a.a.p	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00950000185250.b	ENSGT00940000162220 #36
Bos	ANCESTRAL SPECIES	3	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000153288.a.b.a.a	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01100000263481.n.a.a.b.b.b.a.a.a.b.b.b	ENSGT00390000009693.c.a.b	ENSGT00390000008748.a #20	ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.b	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00510000047104.pb.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.b.b.b.b.a.b.a.a.a.b.b.b.b	ENSGT00530000064208.b.c.a #28	ENSGT00530000064208.a.b #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00950000182810.A.a.a.p	ENSGT00940000163833 #33	ENSGT00910000144204.a #34
Bos_a	ANCESTRAL SPECIES	2	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000153288.a.b.a.a	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01100000263481.n.a.a.b.b.b.a.a.a.b.b.b	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00510000047104.pb.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.b.b.b.b.a.b.a.a.a.b.b.b.b	ENSGT00530000064208.b.c.a #28	ENSGT00530000064208.a.b #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00550000074828.a.h	ENSGT00940000163833 #33	ENSGT00910000144204.a #34
Domestic yak	MODERN SPECIES	27	MEGF10 (ENSBGRG00000008508) #12	ENSBGRG00000008837	C5orf63 (ENSBGRG00000008873) #13	ENSBGRG00000008935	MARCHF3 (ENSBGRG00000008967) #14	LMNB1 (ENSBGRG00000009066) #15	TEX43 (ENSBGRG00000008384) #16	PHAX (ENSBGRG00000008418) #17	ENSBGRG00000008464	ALDH7A1 (ENSBGRG00000008505) #18	GRAMD2B (ENSBGRG00000008902) #19	ENSBGRG00000009340	ZNF608 (ENSBGRG00000009381) #20	ENSBGRG00000009434	CSNK1G3 (ENSBGRG00000009467) #21	CEP120 (ENSBGRG00000009795) #22	ENSBGRG00000009972	PRDM6 (ENSBGRG00000009981) #23	PPIC (ENSBGRG00000010077) #24	SNX24 (ENSBGRG00000010168) #25	SNX2 (ENSBGRG00000010320) #26	ENSBGRG00000010785	SNCAIP (ENSBGRG00000010838) #27	ENSBGRG00000011485	ENSBGRG00000011514 #28	ENSBGRG00000011614 #29	LOX (ENSBGRG00000011693) #30	SRFBP1 (ENSBGRG00000011801) #31	FTMT (ENSBGRG00000011952) #32	ENSBGRG00000011975	ENSBGRG00000012000
Wild yak	MODERN SPECIES	2079																CEP120 (ENSBMUG00000003323) #22	ENSBMUG00000003385
Bos_b	ANCESTRAL SPECIES	2	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000153288.a.b.a.a	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000009693.c.a.b	ENSGT00390000008748.a #20	ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.b	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00510000047104.pb.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.b.b.b.b.a.b.a.a.a.b.b.b.b	ENSGT00530000064208.b.c.a #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00950000182810.A.a.a.p	ENSGT00910000144204.a #34	ENSGT00950000185250.b	ENSGT00940000162220 #36
Cow	MODERN SPECIES	26	CCDC192 (ENSBTAG00000052380)	CTXN3 (ENSBTAG00000031135) #10	PRRC1 (ENSBTAG00000021977) #11	MEGF10 (ENSBTAG00000000329) #12	C7H5orf63 (ENSBTAG00000017835) #13	ENSBTAG00000051246	MARCHF3 (ENSBTAG00000006797) #14	LMNB1 (ENSBTAG00000002882) #15	TEX43 (ENSBTAG00000046718) #16	PHAX (ENSBTAG00000009647) #17	ALDH7A1 (ENSBTAG00000009646) #18	GRAMD2B (ENSBTAG00000014974) #19	ENSBTAG00000046696	ZNF608 (ENSBTAG00000016137) #20	CSNK1G3 (ENSBTAG00000017550) #21	CEP120 (ENSBTAG00000013184) #22	ENSBTAG00000048849	PRDM6 (ENSBTAG00000020578) #23	PPIC (ENSBTAG00000001568) #24	SNX24 (ENSBTAG00000031069) #25	SELENOW (ENSBTAG00000049671)	SNX2 (ENSBTAG00000025358) #26	SNCAIP (ENSBTAG00000021971) #27	ENSBTAG00000019881 #28	LOX (ENSBTAG00000012994) #30	SRFBP1 (ENSBTAG00000014320) #31	FTMT (ENSBTAG00000005779) #32	ENSBTAG00000054810	ENSBTAG00000003086	ENSBTAG00000054377	PRR16 (ENSBTAG00000050473) #34
Hybrid Bos Indicus	MODERN SPECIES	26	ENSBIXG00005020236	MARCHF3 (ENSBIXG00005020248) #14	LMNB1 (ENSBIXG00005020270) #15	TEX43 (ENSBIXG00005020279) #16	ENSBIXG00005020292	PHAX (ENSBIXG00005020305) #17	ALDH7A1 (ENSBIXG00005020419) #18	ENSBIXG00005020428	GRAMD2B (ENSBIXG00005020617) #19	ENSBIXG00005020655	ENSBIXG00005020686	ZNF608 (ENSBIXG00005020763) #20	ENSBIXG00005020820	CSNK1G3 (ENSBIXG00005020916) #21	ENSBIXG00005020954	CEP120 (ENSBIXG00005003563) #22	PRDM6 (ENSBIXG00005021169) #23	PPIC (ENSBIXG00005021210) #24	SNX2 (ENSBIXG00005021360) #26	SNCAIP (ENSBIXG00005000013) #27	ENSBIXG00005007161	ENSBIXG00005021623 #28	LOX (ENSBIXG00005021644) #30	SRFBP1 (ENSBIXG00005021661) #31	FTMT (ENSBIXG00005021697) #32	ENSBIXG00005021719	PRR16 (ENSBIXG00005021746) #34	ENSBIXG00005003670	FAM170A (ENSBIXG00005021812) #36	HSD17B4 (ENSBIXG00005022565) #37	ENSBIXG00005003869
American bison	MODERN SPECIES	3152	PRRC1 (ENSBBBG00000008498) #11	MEGF10 (ENSBBBG00000013216) #12	C5orf63 (ENSBBBG00000013233) #13	ENSBBBG00000013237	MARCHF3 (ENSBBBG00000013244) #14	LMNB1 (ENSBBBG00000001642) #15	TEX43 (ENSBBBG00000013255) #16	PHAX (ENSBBBG00000002682) #17	ALDH7A1 (ENSBBBG00000013647) #18	GRAMD2B (ENSBBBG00000006943) #19	ENSBBBG00000013799	ZNF608 (ENSBBBG00000007357) #20	ENSBBBG00000002964	CSNK1G3 (ENSBBBG00000013942) #21	ENSBBBG00000003049	CEP120 (ENSBBBG00000003075) #22	PRDM6 (ENSBBBG00000003079) #23	PPIC (ENSBBBG00000003085) #24	SNX24 (ENSBBBG00000014002) #25	SNX2 (ENSBBBG00000014014) #26	ENSBBBG00000003110	ENSBBBG00000007030 #28	ENSBBBG00000014027 #29	LOX (ENSBBBG00000014035) #30	SRFBP1 (ENSBBBG00000014044) #31	FTMT (ENSBBBG00000014051) #32	ENSBBBG00000003134	PRR16 (ENSBBBG00000014064) #34	ENSBBBG00000014067
Caprinae	ANCESTRAL SPECIES	3	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000153288.a.b.a.a.mb	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00510000047104.pb.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b.i #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a.b #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000001440.a.b	ENSGT00940000162220 #36	ENSGT00940000158343 #37
Goat	MODERN SPECIES	26	PRRC1 (ENSCHIG00000026659) #11	MEGF10 (ENSCHIG00000025358) #12	C5orf63 (ENSCHIG00000023331) #13	ENSCHIG00000010842	MARCHF3 (ENSCHIG00000024023) #14	ENSCHIG00000008661	LMNB1 (ENSCHIG00000013615) #15	TEX43 (ENSCHIG00000019799) #16	PHAX (ENSCHIG00000019187) #17	ALDH7A1 (ENSCHIG00000008246) #18	GRAMD2B (ENSCHIG00000025691) #19	ENSCHIG00000010010	ZNF608 (ENSCHIG00000026647) #20	CSNK1G3 (ENSCHIG00000025226) #21	ENSCHIG00000009675	CEP120 (ENSCHIG00000011238) #22	PRDM6 (ENSCHIG00000025154) #23	ENSCHIG00000011061	PPIC (ENSCHIG00000015045) #24	ENSCHIG00000007585 #25	SNX2 (ENSCHIG00000007248) #26	SNCAIP (ENSCHIG00000013060) #27	ENSCHIG00000008598 #28	LOX (ENSCHIG00000017030) #30	SRFBP1 (ENSCHIG00000019724) #31	FTMT (ENSCHIG00000004660) #32	ENSCHIG00000011744	ENSCHIG00000022572	PRR16 (ENSCHIG00000003497) #34	ENSCHIG00000014731	ENSCHIG00000020713
Rambouillet Sheep	MODERN SPECIES	21	CCDC192 (ENSOARG00020003324)	CTXN3 (ENSOARG00020003384) #10	PRRC1 (ENSOARG00020003409) #11	MEGF10 (ENSOARG00020003480) #12	C5orf63 (ENSOARG00020003576) #13	ENSOARG00020003609	MARCH3 (ENSOARG00020003620) #14	LMNB1 (ENSOARG00020003667) #15	TEX43 (ENSOARG00020003771) #16	PHAX (ENSOARG00020003789) #17	ENSOARG00020003897 #18	GRAMD2B (ENSOARG00020004704) #19	ZNF608 (ENSOARG00020005272) #20	ENSOARG00020005368	CSNK1G3 (ENSOARG00020005431) #21	CEP120 (ENSOARG00020005625) #22	ENSOARG00020005831	PRDM6 (ENSOARG00020005846) #23	PPIC (ENSOARG00020005926) #24	ENSOARG00020005946 #25	SNX2 (ENSOARG00020006003) #26	ENSOARG00020006104	SNCAIP (ENSOARG00020006162) #27	ENSOARG00020006334 #28	ENSOARG00020006374 #29	LOX (ENSOARG00020006459) #30	SRFBP1 (ENSOARG00020006515) #31	FTMT (ENSOARG00020006630) #32	PRR16 (ENSOARG00020006682) #34	ENSOARG00020006760	FAM170A (ENSOARG00020006839) #36
Siberian musk deer	MODERN SPECIES	101	CTXN3 (ENSMMSG00000003894) #10	ENSMMSG00000003899	ENSMMSG00000003901	PRRC1 (ENSMMSG00000003907) #11	MEGF10 (ENSMMSG00000003923) #12	C5orf63 (ENSMMSG00000003981) #13	MARCHF3 (ENSMMSG00000003994) #14	ENSMMSG00000004009 #15	TEX43 (ENSMMSG00000004028) #16	ENSMMSG00000004037 #17	ALDH7A1 (ENSMMSG00000004048) #18	GRAMD2B (ENSMMSG00000004112) #19	ZNF608 (ENSMMSG00000014318) #20	ENSMMSG00000014341	CSNK1G3 (ENSMMSG00000014374) #21	CEP120 (ENSMMSG00000014464) #22	PRDM6 (ENSMMSG00000014526) #23	PPIC (ENSMMSG00000014546) #24	SNX24 (ENSMMSG00000014587) #25	ENSMMSG00000014598
Camelidae	ANCESTRAL SPECIES	1	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT01030000237225	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Arabian camel	MODERN SPECIES	22	FBN2 (ENSCDRG00005003090) #8	SLC12A2 (ENSCDRG00005003167) #9	CCDC192 (ENSCDRG00005003262)	PRRC1 (ENSCDRG00005003278) #11	MEGF10 (ENSCDRG00005003289) #12	C5orf63 (ENSCDRG00005003328) #13	MARCHF3 (ENSCDRG00005003350) #14	ENSCDRG00005003369	LMNB1 (ENSCDRG00005003405) #15	TEX43 (ENSCDRG00005003472) #16	PHAX (ENSCDRG00005003512) #17	ALDH7A1 (ENSCDRG00005003576) #18	GRAMD2B (ENSCDRG00005003840) #19	ZNF608 (ENSCDRG00005004125) #20	CSNK1G3 (ENSCDRG00005004199) #21	CEP120 (ENSCDRG00005004439) #22	PRDM6 (ENSCDRG00005004531) #23	PPIC (ENSCDRG00005004612) #24	SNX24 (ENSCDRG00005004649) #25	SNX2 (ENSCDRG00005004687) #26	SNCAIP (ENSCDRG00005004819) #27	ENSCDRG00005004899 #28	ENSCDRG00005004924	LOX (ENSCDRG00005004961) #30	SRFBP1 (ENSCDRG00005004973) #31	FTMT (ENSCDRG00005004988) #32	PRR16 (ENSCDRG00005005018) #34	FAM170A (ENSCDRG00005005051) #36	HSD17B4 (ENSCDRG00005005096) #37	TNFAIP8 (ENSCDRG00005005377)	DMXL1 (ENSCDRG00005005415)
Alpaca	MODERN SPECIES	4000																CEP120 (ENSVPAG00000006044) #22
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Carnivora	ANCESTRAL SPECIES	8	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Caniformia	ANCESTRAL SPECIES	5	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Mustelinae	ANCESTRAL SPECIES	38	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b	ENSGT00390000004950	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31
Ferret	MODERN SPECIES	241	APC (ENSMPUG00000012691)	SRP19 (ENSMPUG00000012695)	REEP5 (ENSMPUG00000012722)	DCP2 (ENSMPUG00000012723)	MCC (ENSMPUG00000012725)	ENSMPUG00000012775	FAM193B (ENSMPUG00000012776)	DDX41 (ENSMPUG00000012792)	PHAX (ENSMPUG00000012803) #17	ALDH7A1 (ENSMPUG00000012808) #18	GRAMD2B (ENSMPUG00000012892) #19	ENSMPUG00000012939	ZNF608 (ENSMPUG00000012945) #20	ENSMPUG00000012948	CSNK1G3 (ENSMPUG00000012952) #21	CEP120 (ENSMPUG00000012956) #22	PRDM6 (ENSMPUG00000012965) #23	PPIC (ENSMPUG00000012979) #24	SNX24 (ENSMPUG00000012998) #25	SNX2 (ENSMPUG00000013002) #26	SNCAIP (ENSMPUG00000013015) #27	ENSMPUG00000013023 #28	LOX (ENSMPUG00000013025) #30	SRFBP1 (ENSMPUG00000013031) #31
American mink	MODERN SPECIES	277																CEP120 (ENSNVIG00000020892) #22	PRDM6 (ENSNVIG00000020881) #23	PPIC (ENSNVIG00000020868) #24	ENSNVIG00000020860 #25	SNX2 (ENSNVIG00000020842) #26	SNCAIP (ENSNVIG00000020771) #27	ENSNVIG00000020750 #28	ENSNVIG00000020746 #29	ENSNVIG00000020736	LOX (ENSNVIG00000020722) #30	SRFBP1 (ENSNVIG00000020710) #31
Ursidae	ANCESTRAL SPECIES	16	ENSGT00950000183158.E #8	ENSGT00940000155742.g.b #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00940000168934.a	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Ursus	ANCESTRAL SPECIES	130	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742.g.b #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Polar bear	MODERN SPECIES	215	SLC27A6 (ENSUMAG00000009642) #7	FBN2 (ENSUMAG00000009691) #8	SLC12A2 (ENSUMAG00000010738) #9	CTXN3 (ENSUMAG00000017127) #10	PRRC1 (ENSUMAG00000017137) #11	MEGF10 (ENSUMAG00000017150) #12	C5orf63 (ENSUMAG00000017185) #13	MARCHF3 (ENSUMAG00000017190) #14	LMNB1 (ENSUMAG00000017194) #15	PHAX (ENSUMAG00000017214) #17	ALDH7A1 (ENSUMAG00000017407) #18	GRAMD2B (ENSUMAG00000017911) #19	ENSUMAG00000017936	ZNF608 (ENSUMAG00000017944) #20	CSNK1G3 (ENSUMAG00000017958) #21	CEP120 (ENSUMAG00000017980) #22	PRDM6 (ENSUMAG00000017993) #23	PPIC (ENSUMAG00000018024) #24	SNX24 (ENSUMAG00000018038) #25	SNX2 (ENSUMAG00000018092) #26	SNCAIP (ENSUMAG00000018292) #27	ENSUMAG00000018297 #28	ENSUMAG00000018319 #29	LOX (ENSUMAG00000018325) #30	SRFBP1 (ENSUMAG00000018340) #31	FTMT (ENSUMAG00000018370) #32	ENSUMAG00000018381 #33	PRR16 (ENSUMAG00000018387) #34	FAM170A (ENSUMAG00000018399) #36	HSD17B4 (ENSUMAG00000018411) #37	TNFAIP8 (ENSUMAG00000018436)
American black bear	MODERN SPECIES	6944																ENSUAMG00000014420 #22
Giant Panda	MODERN SPECIES	13	ENSAMEG00000026297 ##8	SLC12A2 (ENSAMEG00000005093) #9	CCDC192 (ENSAMEG00000002431)	CTXN3 (ENSAMEG00000018564) #10	PRRC1 (ENSAMEG00000028752) #11	MEGF10 (ENSAMEG00000010155) #12	C5orf63 (ENSAMEG00000010154) #13	MARCHF3 (ENSAMEG00000010126) #14	LMNB1 (ENSAMEG00000010051) #15	PHAX (ENSAMEG00000010042) #17	ALDH7A1 (ENSAMEG00000009988) #18	GRAMD2B (ENSAMEG00000009967) #19	ENSAMEG00000029691	ZNF608 (ENSAMEG00000000307) #20	CSNK1G3 (ENSAMEG00000000322) #21	CEP120 (ENSAMEG00000000345) #22	PRDM6 (ENSAMEG00000015711) #23	PPIC (ENSAMEG00000025827) #24	SNX24 (ENSAMEG00000027221) #25	SNX2 (ENSAMEG00000015717) #26	SNCAIP (ENSAMEG00000015772) #27	ENSAMEG00000018896 #28	LOX (ENSAMEG00000018055) #30	ENSAMEG00000018050 #31	FTMT (ENSAMEG00000018885) #32	ENSAMEG00000018048 #34	FAM170A (ENSAMEG00000015742) #36	HSD17B4 (ENSAMEG00000015674) #37	TNFAIP8 (ENSAMEG00000015672)	DMXL1 (ENSAMEG00000015597)	DTWD2 (ENSAMEG00000015588)
Canidae	ANCESTRAL SPECIES	9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00940000168934.a	ENSGT00940000155762	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000167085	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Canis_lupus	ANCESTRAL SPECIES	15	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000162325.A.b	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084.o #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00940000168934.a	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120.b #32	ENSGT00940000167085	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Dog	MODERN SPECIES	2	PRRC1 (ENSCAFG00845011172) #11	C11H5orf63 (ENSCAFG00845011127) #13	MEGF10 (ENSCAFG00845010856) #12	MARCHF3 (ENSCAFG00845010776) #14	ENSCAFG00845010747	LMNB1 (ENSCAFG00845010706) #15	TEX43 (ENSCAFG00845010672) #16	ENSCAFG00845010628 #17	ALDH7A1 (ENSCAFG00845010312) #18	GRAMD2B (ENSCAFG00845009842) #19	ENSCAFG00845009687	ENSCAFG00845009669	ENSCAFG00845009655	ZNF608 (ENSCAFG00845009584) #20	CSNK1G3 (ENSCAFG00845009305) #21	CEP120 (ENSCAFG00845008875) #22	PRDM6 (ENSCAFG00845008714) #23	PPIC (ENSCAFG00845008666) #24	ENSCAFG00845008579 #25	SNX2 (ENSCAFG00845008327) #26	ENSCAFG00845008139	SNCAIP (ENSCAFG00845008034) #27	ENSCAFG00845007964 #28	LOX (ENSCAFG00845007914) #30	SRFBP1 (ENSCAFG00845007751) #31	ENSCAFG00845007677 #32	ENSCAFG00845007624 #33	ENSCAFG00845007575	ENSCAFG00845007449 #33	ENSCAFG00845007375	PRR16 (ENSCAFG00845007330) #34
Dingo	MODERN SPECIES	366	CTXN3 (ENSCAFG00020010014) #10	PRRC1 (ENSCAFG00020010006) #11	MEGF10 (ENSCAFG00020009935) #12	C5orf63 (ENSCAFG00020009919) #13	MARCHF3 (ENSCAFG00020009917) #14	ENSCAFG00020009904	LMNB1 (ENSCAFG00020009857) #15	TEX43 (ENSCAFG00020009851) #16	ENSCAFG00020009834 #17	ALDH7A1 (ENSCAFG00020009827) #18	GRAMD2B (ENSCAFG00020009769) #19	ENSCAFG00020009764	ENSCAFG00020009741	ZNF608 (ENSCAFG00020009684) #20	CSNK1G3 (ENSCAFG00020009560) #21	CEP120 (ENSCAFG00020009535) #22	ENSCAFG00020009534	PRDM6 (ENSCAFG00020009527) #23	PPIC (ENSCAFG00020009505) #24	ENSCAFG00020009501 #25	SNX2 (ENSCAFG00020009477) #26	ENSCAFG00020009472	SNCAIP (ENSCAFG00020009448) #27	ENSCAFG00020009447	ENSCAFG00020009423 #28	ENSCAFG00020009417 #29	LOX (ENSCAFG00020009393) #30	SRFBP1 (ENSCAFG00020009389) #31	ENSCAFG00020009349	ENSCAFG00020009347 #32	ENSCAFG00020009303
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00940000168615.a	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00530000064208.b.c.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Panthera	ANCESTRAL SPECIES	6	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00940000168615.a	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00940000168615.a	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00390000010089.e.a	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
leopard	MODERN SPECIES	56													ENSPPRG00000018021	ZNF608 (ENSPPRG00000007162) #20	CSNK1G3 (ENSPPRG00000006839) #21	CEP120 (ENSPPRG00000005961) #22	PRDM6 (ENSPPRG00000005265) #23	PPIC (ENSPPRG00000005132) #24	SNX24 (ENSPPRG00000004784) #25	SNX2 (ENSPPRG00000004316) #26	SNCAIP (ENSPPRG00000004130) #27	ENSPPRG00000002487 #28	LOX (ENSPPRG00000002411) #30	SRFBP1 (ENSPPRG00000001695) #31	FTMT (ENSPPRG00000017740) #32	ENSPPRG00000001192	ENSPPRG00000000460	PRR16 (ENSPPRG00000000288) #34	FAM170A (ENSPPRG00000000102) #36	HSD17B4 (ENSPPRG00000022809) #37	ENSPPRG00000024484
Cat	MODERN SPECIES		FBN2 (ENSFCAG00000009685) #8	SLC12A2 (ENSFCAG00000038354) #9	CCDC192 (ENSFCAG00000026174)	CTXN3 (ENSFCAG00000003213) #10	PRRC1 (ENSFCAG00000028143) #11	MEGF10 (ENSFCAG00000036185) #12	CA1H5orf63 (ENSFCAG00000028551) #13	MARCHF3 (ENSFCAG00000003148) #14	LMNB1 (ENSFCAG00000003146) #15	PHAX (ENSFCAG00000001701) #17	ALDH7A1 (ENSFCAG00000031152) #18	GRAMD2B (ENSFCAG00000011618) #19	ENSFCAG00000027125	ZNF608 (ENSFCAG00000005978) #20	CSNK1G3 (ENSFCAG00000026983) #21	CEP120 (ENSFCAG00000005023) #22	PRDM6 (ENSFCAG00000026249) #23	PPIC (ENSFCAG00000008910) #24	SNX24 (ENSFCAG00000022982) #25	SNX2 (ENSFCAG00000018292) #26	SNCAIP (ENSFCAG00000010549) #27	ENSFCAG00000011609 #28	LOX (ENSFCAG00000039368) #30	SRFBP1 (ENSFCAG00000035118) #31	ENSFCAG00000029755	ENSFCAG00000023871 #33	ENSFCAG00000043811	PRR16 (ENSFCAG00000022947) #34	FAM170A (ENSFCAG00000024805) #36	HSD17B4 (ENSFCAG00000008425) #37	ENSFCAG00000035062
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Donkey	MODERN SPECIES	3	PRRC1 (ENSEASG00005012533) #11	MEGF10 (ENSEASG00005012525) #12	C5orf63 (ENSEASG00005036217) #13	ENSEASG00005011272	MARCHF3 (ENSEASG00005012516) #14	LMNB1 (ENSEASG00005012515) #15	TEX43 (ENSEASG00005032990) #16	PHAX (ENSEASG00005012510) #17	ALDH7A1 (ENSEASG00005012505) #18	ENSEASG00005037310	ENSEASG00005024485	GRAMD2B (ENSEASG00005012499) #19	ZNF608 (ENSEASG00005012494) #20	ENSEASG00005026631	CSNK1G3 (ENSEASG00005012485) #21	CEP120 (ENSEASG00005012479) #22	PRDM6 (ENSEASG00005012472) #23	PPIC (ENSEASG00005012467) #24	ENSEASG00005027987 #25	SNX2 (ENSEASG00005012457) #26	SNCAIP (ENSEASG00005012446) #27	ENSEASG00005012436 #28	LOX (ENSEASG00005012428) #30	SRFBP1 (ENSEASG00005012421) #31	FTMT (ENSEASG00005012414) #32	ENSEASG00005012410	ENSEASG00005027167 #33	PRR16 (ENSEASG00005014891) #34	FAM170A (ENSEASG00005014905) #36	HSD17B4 (ENSEASG00005014918) #37	TNFAIP8 (ENSEASG00005033765)
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Greater horseshoe bat	MODERN SPECIES	25	CCDC192 (ENSRFEG00010001188)	CTXN3 (ENSRFEG00010001164) #10	PRRC1 (ENSRFEG00010001126) #11	MEGF10 (ENSRFEG00010001053) #12	C5orf63 (ENSRFEG00010001015) #13	MARCHF3 (ENSRFEG00010000985) #14	ENSRFEG00010000967	LMNB1 (ENSRFEG00010000927) #15	TEX43 (ENSRFEG00010000914) #16	ENSRFEG00010000899	PHAX (ENSRFEG00010000884) #17	ALDH7A1 (ENSRFEG00010000780) #18	GRAMD2B (ENSRFEG00010000623) #19	ZNF608 (ENSRFEG00010000499) #20	CSNK1G3 (ENSRFEG00010000419) #21	CEP120 (ENSRFEG00010000275) #22	PRDM6 (ENSRFEG00010000233) #23	PPIC (ENSRFEG00010019367) #24	SNX24 (ENSRFEG00010019276) #25	SNX2 (ENSRFEG00010019216) #26	SNCAIP (ENSRFEG00010019009) #27	ENSRFEG00010018959 #28	ENSRFEG00010018934 #29	LOX (ENSRFEG00010018895) #30	ENSRFEG00010018872 #31	FTMT (ENSRFEG00010018860) #32	PRR16 (ENSRFEG00010018796) #34	ENSRFEG00010018780	FAM170A (ENSRFEG00010018721) #36	HSD17B4 (ENSRFEG00010018033) #37	TNFAIP8 (ENSRFEG00010017937)
Microbat	MODERN SPECIES	937	FBN2 (ENSMLUG00000008374) #8	SLC12A2 (ENSMLUG00000008327) #9	CTXN3 (ENSMLUG00000009416) #10	PRRC1 (ENSMLUG00000010866) #11	MEGF10 (ENSMLUG00000010818) #12	C5orf63 (ENSMLUG00000002467) #13	MARCHF3 (ENSMLUG00000009747) #14	LMNB1 (ENSMLUG00000009721) #15	ENSMLUG00000000184 #17	ALDH7A1 (ENSMLUG00000002944) #18	GRAMD2B (ENSMLUG00000002933) #19	ENSMLUG00000028224	ENSMLUG00000023257	ZNF608 (ENSMLUG00000008677) #20	CSNK1G3 (ENSMLUG00000013708) #21	CEP120 (ENSMLUG00000015490) #22	PRDM6 (ENSMLUG00000010064) #23	PPIC (ENSMLUG00000024456) #24	SNX24 (ENSMLUG00000009392) #25	SNX2 (ENSMLUG00000007851) #26	SNCAIP (ENSMLUG00000012563) #27	ENSMLUG00000012560 #28	LOX (ENSMLUG00000026720) #30	SRFBP1 (ENSMLUG00000009984) #31	ENSMLUG00000030652	PRR16 (ENSMLUG00000016069) #34	ENSMLUG00000022953	ENSMLUG00000023391	FAM170A (ENSMLUG00000015098) #36	HSD17B4 (ENSMLUG00000009404) #37	TNFAIP8 (ENSMLUG00000009398)
Megabat	MODERN SPECIES	6364																CEP120 (ENSPVAG00000017744) #22
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000009378 #22
Hedgehog	MODERN SPECIES	6403																CEP120 (ENSEEUG00000005479) #22
Common shrew	MODERN SPECIES	10712																CEP120 (ENSSARG00000010901) #22
Marsupialia	ANCESTRAL SPECIES	33			ENSGT00940000157873	ENSGT00390000004950	ENSGT00530000063749.c.b	ENSGT00940000159623	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000159594	ENSGT00490000043356.b	ENSGT00950000182971.C	ENSGT00950000182870.a.a.a.b	ENSGT01050000244887.A.b.b	ENSGT00940000161260	ENSGT00950000182925.D.b	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565	ENSGT01100000264767
Marsupialia_b	ANCESTRAL SPECIES	18	ENSGT00940000154609.f	ENSGT00940000157873	ENSGT00390000004950	ENSGT00530000063749.c.b.e	ENSGT00940000159623	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000159594	ENSGT00490000043356.b	ENSGT00950000182971.C	ENSGT00950000182870.a.a.a.b.e	ENSGT01050000244887.A.b.b	ENSGT00940000156842.r	ENSGT00940000161260	ENSGT00950000182925.D.b	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565	ENSGT01100000264767
Diprotodontia	ANCESTRAL SPECIES	14	ENSGT00940000154609.f	ENSGT00940000157873	ENSGT00390000004950	ENSGT00530000063749.c.b.e	ENSGT00940000159623	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000159594	ENSGT00490000043356.b	ENSGT00950000182971.C	ENSGT00950000182870.a.a.a.b.e	ENSGT01050000244887.A.b.b	ENSGT00940000156842.r	ENSGT00940000161260	ENSGT00950000182925.D.b	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565	ENSGT01100000264767
Diprotodontia_a	ANCESTRAL SPECIES	13	ENSGT00940000154609.f	ENSGT00940000157873	ENSGT00390000004950	ENSGT00530000063749.c.b.e	ENSGT00940000159623	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000159594	ENSGT00490000043356.b	ENSGT00950000182971.C	ENSGT00950000182870.a.a.a.b.e	ENSGT01050000244887.A.b.b	ENSGT00940000156842.r	ENSGT00940000161260	ENSGT00950000182925.D.b	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565	ENSGT01100000264767
Common wonbat	MODERN SPECIES	1043	SRP19 (ENSVURG00010015802)	APC (ENSVURG00010015764)	EPB41L4A (ENSVURG00010015717)	SLC12A2 (ENSVURG00010011940) #9	ENSVURG00010011747	ENSVURG00010011732	SEMA4D (ENSVURG00010011674)	SECISBP2 (ENSVURG00010011645)	CKS2 (ENSVURG00010011642)	ENSVURG00010011638	ENSVURG00010011625	S1PR3 (ENSVURG00010011620)	ENSVURG00010011610	NXNL2 (ENSVURG00010011602)	ENSVURG00010011593	CEP120 (ENSVURG00010011539) #22	PRDM6 (ENSVURG00010011514) #23	PPIC (ENSVURG00010011501) #24	SNX24 (ENSVURG00010011487) #25	SNX2 (ENSVURG00010011441) #26	SNCAIP (ENSVURG00010011390) #27	ENSVURG00010011370 #28	LOX (ENSVURG00010011351) #30	SRFBP1 (ENSVURG00010011339) #31	ENSVURG00010011332	PRR16 (ENSVURG00010011319) #34	HSD17B4 (ENSVURG00010011297) #37	TNFAIP8 (ENSVURG00010011274)	DMXL1 (ENSVURG00010010777)	DTWD2 (ENSVURG00010010691)	ENSVURG00010010654
koala	MODERN SPECIES	137	ENSPCIG00000010276	ENSPCIG00000036958	ENSPCIG00000010277	ENSPCIG00000035124	ENSPCIG00000010279	SLC12A2 (ENSPCIG00000010286) #9	CCDC192 (ENSPCIG00000010293)	SEMA4D (ENSPCIG00000010300)	SECISBP2 (ENSPCIG00000010304)	CKS2 (ENSPCIG00000010305)	SHC3 (ENSPCIG00000000220)	S1PR3 (ENSPCIG00000000130)	ENSPCIG00000021928	NXNL2 (ENSPCIG00000021927)	ENSPCIG00000021926	CEP120 (ENSPCIG00000021920) #22	PRDM6 (ENSPCIG00000015716) #23	PPIC (ENSPCIG00000027269) #24	SNX24 (ENSPCIG00000027271) #25	SNX2 (ENSPCIG00000026934) #26	ENSPCIG00000031617	SNCAIP (ENSPCIG00000019685) #27	ENSPCIG00000028536 #28	LOX (ENSPCIG00000028533) #30	SRFBP1 (ENSPCIG00000028532) #31	ENSPCIG00000028531	ENSPCIG00000018258	PRR16 (ENSPCIG00000034540) #34
Wallaby	MODERN SPECIES	7715																ENSMEUG00000013685 #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000011965	ENSSHAG00000028339	SRP19 (ENSSHAG00000028906)	ENSSHAG00000001133	ENSSHAG00000020566	ENSSHAG00000002763 #9	ENSSHAG00000027428	ENSSHAG00000023340	SECISBP2 (ENSSHAG00000005947)	ENSSHAG00000031203	SHC3 (ENSSHAG00000001805)	S1PR3 (ENSSHAG00000031138)	ENSSHAG00000029696	ENSSHAG00000006013	ENSSHAG00000026542	ENSSHAG00000006623 #22	PRDM6 (ENSSHAG00000009542) #23	PPIC (ENSSHAG00000011058) #24	SNX24 (ENSSHAG00000011329) #25	SNX2 (ENSSHAG00000012882) #26	ENSSHAG00000029451	SNCAIP (ENSSHAG00000014503) #27	ENSSHAG00000022030	ENSSHAG00000015432 #28	LOX (ENSSHAG00000028534) #30	SRFBP1 (ENSSHAG00000020966) #31	ENSSHAG00000028557	PRR16 (ENSSHAG00000024340) #34	ENSSHAG00000025921	HSD17B4 (ENSSHAG00000005224) #37	TNFAIP8 (ENSSHAG00000007788)
Opossum	MODERN SPECIES	5		MINAR2 (ENSMODG00000013268)	REEP5 (ENSMODG00000013272)	SRP19 (ENSMODG00000013278)	APC (ENSMODG00000013281)	EPB41L4A (ENSMODG00000013316)	SLC12A2 (ENSMODG00000013329) #9	CCDC192 (ENSMODG00000029220)	SEMA4D (ENSMODG00000013348)	SECISBP2 (ENSMODG00000013365)	CKS2 (ENSMODG00000013369)	SHC3 (ENSMODG00000013379)	S1PR3 (ENSMODG00000013382)	NXNL2 (ENSMODG00000013386)	ENSMODG00000013395	CEP120 (ENSMODG00000013411) #22	PRDM6 (ENSMODG00000013415) #23	PPIC (ENSMODG00000013425) #24	SNX24 (ENSMODG00000013427) #25	SNX2 (ENSMODG00000013436) #26	SNCAIP (ENSMODG00000013460) #27	ENSMODG00000013464 #28	ENSMODG00000025417	ENSMODG00000046897	ENSMODG00000028219	LOX (ENSMODG00000013484) #30	SRFBP1 (ENSMODG00000013487) #31	PRR16 (ENSMODG00000013488) #34	ENSMODG00000046927	ENSMODG00000048225	HSD17B4 (ENSMODG00000013536) #37
Platypus	MODERN SPECIES	88	ENSOANG00000037223	MTAP (ENSOANG00000013963)	ENSOANG00000045164	LMNB1 (ENSOANG00000011225) #15	ENSOANG00000040947 #16	ENSOANG00000048601	ENSOANG00000041735 #19	PHAX (ENSOANG00000012052) #17	ALDH7A1 (ENSOANG00000002544) #18	ENSOANG00000049707 #19	ENSOANG00000045009	ENSOANG00000014072 #19	ENSOANG00000042557	ZNF608 (ENSOANG00000014652) #20	CSNK1G3 (ENSOANG00000011556) #21	CEP120 (ENSOANG00000008791) #22	PRDM6 (ENSOANG00000001527) #23	PPIC (ENSOANG00000010050) #24	SNX24 (ENSOANG00000010049) #25	SNX2 (ENSOANG00000010048) #26	SNCAIP (ENSOANG00000010047) #27	ENSOANG00000042757 #28	ENSOANG00000010046	LOX (ENSOANG00000010043) #30	SRFBP1 (ENSOANG00000010042) #31	PRR16 (ENSOANG00000012502) #34	HSD17B4 (ENSOANG00000002946) #37	TNFAIP8 (ENSOANG00000006164)	DMXL1 (ENSOANG00000011538)	DTWD2 (ENSOANG00000022566)	SEMA6A (ENSOANG00000008223)
Sauria	ANCESTRAL SPECIES	5	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Episquamata	ANCESTRAL SPECIES	6	ENSGT00390000006753.B	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00390000006753.B	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Elapidae	ANCESTRAL SPECIES	7	ENSGT00390000006753.B	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.c.b #18	ENSGT00940000154938.c.a #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00390000000134.b.lb.b
Indian cobra	DUPLICATION
Indian cobra	MODERN SPECIES	1	ISOC1 (ENSNNAG00000000839)	ENSNNAG00000000855 #8	ENSNNAG00000000875 #8	SLC12A2 (ENSNNAG00000000896) #9	MEGF10 (ENSNNAG00000000929) #12	C5orf63 (ENSNNAG00000000978) #13	MARCHF3 (ENSNNAG00000001000) #14	LMNB1 (ENSNNAG00000001019) #15	TEX43 (ENSNNAG00000001039) #16	PHAX (ENSNNAG00000001051) #17	ALDH7A1 (ENSNNAG00000001067) #18	GRAMD2B (ENSNNAG00000001106) #19	ZNF608 (ENSNNAG00000001150) #20	CSNK1G3 (ENSNNAG00000001220) #21	ENSNNAG00000001301 #22	ENSNNAG00000001321 #22	PRDM6 (ENSNNAG00000001349) #23	PPIC (ENSNNAG00000001378) #24	SNX24 (ENSNNAG00000001389) #25	SNX2 (ENSNNAG00000001427) #26	SNCAIP (ENSNNAG00000001468) #27	ENSNNAG00000001479 #28	ENSNNAG00000001489	LOX (ENSNNAG00000001498) #30	SRFBP1 (ENSNNAG00000001507) #31	PRR16 (ENSNNAG00000001516) #34	HSD17B4 (ENSNNAG00000001529) #37	TNFAIP8 (ENSNNAG00000001550)	DMXL1 (ENSNNAG00000001609)	DTWD2 (ENSNNAG00000001723)	ENSNNAG00000001738
Indian cobra	MODERN SPECIES	1	ADAMTS19 (ENSNNAG00000000746)	ISOC1 (ENSNNAG00000000839)	ENSNNAG00000000855 #8	ENSNNAG00000000875 #8	SLC12A2 (ENSNNAG00000000896) #9	MEGF10 (ENSNNAG00000000929) #12	C5orf63 (ENSNNAG00000000978) #13	MARCHF3 (ENSNNAG00000001000) #14	LMNB1 (ENSNNAG00000001019) #15	TEX43 (ENSNNAG00000001039) #16	PHAX (ENSNNAG00000001051) #17	ALDH7A1 (ENSNNAG00000001067) #18	GRAMD2B (ENSNNAG00000001106) #19	ZNF608 (ENSNNAG00000001150) #20	CSNK1G3 (ENSNNAG00000001220) #21	ENSNNAG00000001301 #22	ENSNNAG00000001321 #22	PRDM6 (ENSNNAG00000001349) #23	PPIC (ENSNNAG00000001378) #24	SNX24 (ENSNNAG00000001389) #25	SNX2 (ENSNNAG00000001427) #26	SNCAIP (ENSNNAG00000001468) #27	ENSNNAG00000001479 #28	ENSNNAG00000001489	LOX (ENSNNAG00000001498) #30	SRFBP1 (ENSNNAG00000001507) #31	PRR16 (ENSNNAG00000001516) #34	HSD17B4 (ENSNNAG00000001529) #37	TNFAIP8 (ENSNNAG00000001550)	DMXL1 (ENSNNAG00000001609)	DTWD2 (ENSNNAG00000001723)
Elapidae_a	ANCESTRAL SPECIES	9	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.c.b #18	ENSGT00940000154938.d #18	ENSGT00940000154938.c.a #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00390000000134.b.lb.b
Acanthophiinae	ANCESTRAL SPECIES	9	ENSGT00390000006753.B	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.c.b #18	ENSGT00940000154938.c.a #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00390000000134.b.lb.b
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	1	ISOC1 (ENSNSUG00000013803)	FBN2 (ENSNSUG00000013802) #8	SLC12A2 (ENSNSUG00000013798) #9	CTXN3 (ENSNSUG00000013797) #10	MEGF10 (ENSNSUG00000013796) #12	C5orf63 (ENSNSUG00000013794) #13	MARCHF3 (ENSNSUG00000013793) #14	LMNB1 (ENSNSUG00000013792) #15	TEX43 (ENSNSUG00000013791) #16	PHAX (ENSNSUG00000013790) #17	ALDH7A1 (ENSNSUG00000013789) #18	GRAMD2B (ENSNSUG00000013788) #19	ZNF608 (ENSNSUG00000013786) #20	CSNK1G3 (ENSNSUG00000013567) #21	ENSNSUG00000013566 #22	ENSNSUG00000013565 #22	PRDM6 (ENSNSUG00000013564) #23	PPIC (ENSNSUG00000013563) #24	SNX24 (ENSNSUG00000013562) #25	SNX2 (ENSNSUG00000013561) #26	ENSNSUG00000013560	SNCAIP (ENSNSUG00000013559) #27	ENSNSUG00000013558 #28	ENSNSUG00000013557 #29	ENSNSUG00000013556	LOX (ENSNSUG00000013555) #30	SRFBP1 (ENSNSUG00000013554) #31	PRR16 (ENSNSUG00000013553) #34	ENSNSUG00000013552	ENSNSUG00000013551	HSD17B4 (ENSNSUG00000013550) #37
Mainland tiger snake	MODERN SPECIES	1	ADAMTS19 (ENSNSUG00000013805)	ISOC1 (ENSNSUG00000013803)	FBN2 (ENSNSUG00000013802) #8	SLC12A2 (ENSNSUG00000013798) #9	CTXN3 (ENSNSUG00000013797) #10	MEGF10 (ENSNSUG00000013796) #12	C5orf63 (ENSNSUG00000013794) #13	MARCHF3 (ENSNSUG00000013793) #14	LMNB1 (ENSNSUG00000013792) #15	TEX43 (ENSNSUG00000013791) #16	PHAX (ENSNSUG00000013790) #17	ALDH7A1 (ENSNSUG00000013789) #18	GRAMD2B (ENSNSUG00000013788) #19	ZNF608 (ENSNSUG00000013786) #20	CSNK1G3 (ENSNSUG00000013567) #21	ENSNSUG00000013566 #22	ENSNSUG00000013565 #22	PRDM6 (ENSNSUG00000013564) #23	PPIC (ENSNSUG00000013563) #24	SNX24 (ENSNSUG00000013562) #25	SNX2 (ENSNSUG00000013561) #26	ENSNSUG00000013560	SNCAIP (ENSNSUG00000013559) #27	ENSNSUG00000013558 #28	ENSNSUG00000013557 #29	ENSNSUG00000013556	LOX (ENSNSUG00000013555) #30	SRFBP1 (ENSNSUG00000013554) #31	PRR16 (ENSNSUG00000013553) #34	ENSNSUG00000013552	ENSNSUG00000013551
Eastern brown snake	MODERN SPECIES	2												ENSPTXG00000002421 #18	GRAMD2B (ENSPTXG00000002420) #19	ZNF608 (ENSPTXG00000002419) #20	CSNK1G3 (ENSPTXG00000002417) #21	CEP120 (ENSPTXG00000001773) #22	PRDM6 (ENSPTXG00000001772) #23	PPIC (ENSPTXG00000001771) #24	SNX24 (ENSPTXG00000001770) #25	SNX2 (ENSPTXG00000001769) #26	SNCAIP (ENSPTXG00000001768) #27	ENSPTXG00000001767 #28	ENSPTXG00000001766 #29	LOX (ENSPTXG00000001765) #30	SRFBP1 (ENSPTXG00000001763) #31	PRR16 (ENSPTXG00000001762) #34	HSD17B4 (ENSPTXG00000001761) #37	TNFAIP8 (ENSPTXG00000001760)	DMXL1 (ENSPTXG00000001471)	DTWD2 (ENSPTXG00000001411)	ENSPTXG00000001410
Blue-lipped sea krait	MODERN SPECIES	8229																CEP120 (ENSLLTG00000011324) #22
Lizard	MODERN SPECIES	807							TEX43 (ENSACAG00000038889) #16	PHAX (ENSACAG00000002878) #17	ALDH7A1 (ENSACAG00000002899) #18	ENSACAG00000042166	ENSACAG00000040239	GRAMD2B (ENSACAG00000023904) #19	ZNF608 (ENSACAG00000003135) #20	ENSACAG00000043467	CSNK1G3 (ENSACAG00000003167) #21	CEP120 (ENSACAG00000003259) #22	PRDM6 (ENSACAG00000003401) #23	PPIC (ENSACAG00000039749) #24	ENSACAG00000035734	ENSACAG00000037199	SNX24 (ENSACAG00000003449) #25	SNX2 (ENSACAG00000003451) #26	ENSACAG00000036099	SNCAIP (ENSACAG00000023071) #27	ENSACAG00000003682 #28	LOX (ENSACAG00000003698) #30	SRFBP1 (ENSACAG00000003779) #31	ENSACAG00000043368	PRR16 (ENSACAG00000003793) #34	HSD17B4 (ENSACAG00000003796) #37	TNFAIP8 (ENSACAG00000003983)
Laterata	ANCESTRAL SPECIES	8	ENSGT00390000006753.B	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565.w	ENSGT00390000001500
Common wall lizard	MODERN SPECIES	2	FBN2 (ENSPMRG00000018232) #8	SLC12A2 (ENSPMRG00000016289) #9	ENSPMRG00000016051 #10	ENSPMRG00000016048 #10	MEGF10 (ENSPMRG00000016004) #12	ENSPMRG00000015984	MARCHF3 (ENSPMRG00000015974) #14	LMNB1 (ENSPMRG00000015954) #15	TEX43 (ENSPMRG00000015944) #16	PHAX (ENSPMRG00000015927) #17	ALDH7A1 (ENSPMRG00000015851) #18	ENSPMRG00000015835	GRAMD2B (ENSPMRG00000015795) #19	ZNF608 (ENSPMRG00000015766) #20	CSNK1G3 (ENSPMRG00000015720) #21	CEP120 (ENSPMRG00000015529) #22	PRDM6 (ENSPMRG00000015497) #23	PPIC (ENSPMRG00000015485) #24	SNX24 (ENSPMRG00000015475) #25	ENSPMRG00000015469	SNX2 (ENSPMRG00000015453) #26	SNCAIP (ENSPMRG00000015440) #27	ENSPMRG00000015434 #29	LOX (ENSPMRG00000015428) #30	SRFBP1 (ENSPMRG00000015411) #31	PRR16 (ENSPMRG00000015405) #34	ENSPMRG00000015400	HSD17B4 (ENSPMRG00000015361) #37	DMXL1 (ENSPMRG00000012477)	DTWD2 (ENSPMRG00000012140)	ENSPMRG00000012137
Argentine black and white tegu	MODERN SPECIES	25	SLC27A6 (ENSSMRG00000019298) #7	FBN2 (ENSSMRG00000019301) #8	SLC12A2 (ENSSMRG00000019317) #9	ENSSMRG00000019318	CTXN3 (ENSSMRG00000019326) #10	MEGF10 (ENSSMRG00000019328) #12	C5orf63 (ENSSMRG00000019329) #13	MARCHF3 (ENSSMRG00000019330) #14	LMNB1 (ENSSMRG00000019332) #15	PHAX (ENSSMRG00000019333) #17	TEX43 (ENSSMRG00000019334) #16	ALDH7A1 (ENSSMRG00000019335) #18	GRAMD2B (ENSSMRG00000019336) #19	ZNF608 (ENSSMRG00000019339) #20	CSNK1G3 (ENSSMRG00000019342) #21	CEP120 (ENSSMRG00000019343) #22	ENSSMRG00000019344	PRDM6 (ENSSMRG00000019345) #23	PPIC (ENSSMRG00000019346) #24	SNX24 (ENSSMRG00000019347) #25	SNX2 (ENSSMRG00000019348) #26	SNCAIP (ENSSMRG00000019349) #27	ENSSMRG00000019350 #28	ENSSMRG00000019351	LOX (ENSSMRG00000019352) #30	SRFBP1 (ENSSMRG00000019353) #31	PRR16 (ENSSMRG00000019354) #34
tuatara	MODERN SPECIES	249																CEP120 (ENSSPUG00000003179) #22	PRDM6 (ENSSPUG00000003144) #23	PPIC (ENSSPUG00000003122) #24	SNX24 (ENSSPUG00000003104) #25	SNX2 (ENSSPUG00000003094) #26
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Aves	ANCESTRAL SPECIES	4	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Neognathae	ANCESTRAL SPECIES	19	ENSGT00530000063749.c.b	ENSGT00390000004950	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Galloanserae	ANCESTRAL SPECIES	18	ENSGT00530000063749.c.b	ENSGT00390000004950	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Anatidae	ANCESTRAL SPECIES	12	ENSGT00530000063749.c.b	ENSGT00390000004950	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00950000182904.a.b.a	ENSGT00940000158373.a	ENSGT00950000183128.A	ENSGT00940000167760	ENSGT00940000158626	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Duck	MODERN SPECIES	4281	EPB41L4A (ENSAPLG00000015395)	APC (ENSAPLG00000001412)	SRP19 (ENSAPLG00000002624)	REEP5 (ENSAPLG00000002639)	DCP2 (ENSAPLG00000013540)	MCC (ENSAPLG00000013663)	YTHDC2 (ENSAPLG00000013814)	KCNN2 (ENSAPLG00000013890)	PGGT1B (ENSAPLG00000012581)	FEM1C (ENSAPLG00000012870)	ALDH7A1 (ENSAPLG00000012964) #18	GRAMD2B (ENSAPLG00000013303) #19	ENSAPLG00000025614	ZNF608 (ENSAPLG00000016239) #20	CSNK1G3 (ENSAPLG00000003019) #21	CEP120 (ENSAPLG00000001549) #22	PRDM6 (ENSAPLG00000001327) #23	PPIC (ENSAPLG00000000974) #24	SNX24 (ENSAPLG00000000948) #25	SNX2 (ENSAPLG00000015741) #26	ENSAPLG00000021138	SNCAIP (ENSAPLG00000015309) #27	ENSAPLG00000015169 #28	ENSAPLG00000024534 #29	LOX (ENSAPLG00000003826) #30	SRFBP1 (ENSAPLG00000003938) #31	ENSAPLG00000021766	PRR16 (ENSAPLG00000007951) #34	HSD17B4 (ENSAPLG00000009938) #37	TNFAIP8 (ENSAPLG00000001924)	DMXL1 (ENSAPLG00000009280)
Pink-footed goose	MODERN SPECIES	246															ENSABRG00000021701	CEP120 (ENSABRG00000021707) #22	PRDM6 (ENSABRG00000021726) #23	PPIC (ENSABRG00000021728) #24	SNX24 (ENSABRG00000021732) #25	SNX2 (ENSABRG00000021733) #26	SNCAIP (ENSABRG00000021743) #27	ENSABRG00000021749 #28	ENSABRG00000021750 #29	LOX (ENSABRG00000021751) #30	SRFBP1 (ENSABRG00000021752) #31	ENSABRG00000021755	ENSABRG00000021756
Phasianidae	ANCESTRAL SPECIES	5				ENSGT00940000154889	ENSGT00940000159636	ENSGT00950000183041.B	ENSGT00940000158578	ENSGT00940000160246	ENSGT00390000018004	ENSGT00940000164838	ENSGT00390000012666	ENSGT00390000015138	ENSGT00530000063169.b.a	ENSGT00950000183035.b	ENSGT00940000163364	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00390000008748.a.d #20	ENSGT00940000156980 #19	ENSGT00940000154938 #18	ENSGT00940000158626	ENSGT00940000153988.B	ENSGT00950000183128.A	ENSGT00940000158373	ENSGT00940000163078.c
Phasianidae_b	ANCESTRAL SPECIES	5				ENSGT00940000154889	ENSGT00940000159636	ENSGT00950000183041.B	ENSGT00940000158578	ENSGT00940000160246	ENSGT00390000018004	ENSGT00940000164838	ENSGT00390000012666	ENSGT00390000015138	ENSGT00530000063169.b.a	ENSGT00950000183035.b	ENSGT00940000163364	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00390000008748.a.d #20	ENSGT00940000156980 #19	ENSGT00940000154938 #18	ENSGT00940000158626	ENSGT00940000153988.B	ENSGT00950000183128.A	ENSGT00940000158373	ENSGT00940000163078.c
Chicken	MODERN SPECIES	131				MELK (ENSGALG00010001237)	PAX5 (ENSGALG00010001212)	ZCCHC7 (ENSGALG00010001182)	GRHPR (ENSGALG00010001179)	ZBTB5 (ENSGALG00010001178)	POLR1E (ENSGALG00010001171)	DCAF10 (ENSGALG00010001170)	ENSGALG00010001169	ENSGALG00010001165	TRMT10B (ENSGALG00010001160)	FRMPD1 (ENSGALG00010001158)	TOMM5 (ENSGALG00010001191)	CEP120 (ENSGALG00010001306) #22	PRDM6 (ENSGALG00010001215) #23	PPIC (ENSGALG00010001213) #24	SNX24 (ENSGALG00010001400) #25	SNX2 (ENSGALG00010001204) #26	SNCAIP (ENSGALG00010001252) #27	ENSGALG00010001241	ENSGALG00010001240	LOX (ENSGALG00010001292) #30	SRFBP1 (ENSGALG00010001286) #31	ENSGALG00010001276	ZNF608 (ENSGALG00010001195) #20	GRAMD2B (ENSGALG00010001221) #19	ALDH7A1 (ENSGALG00010001156) #18	FEM1C (ENSGALG00010001152)	CCDC112 (ENSGALG00010001151)
Turkey	MODERN SPECIES	1299							PAX5 (ENSMGAG00000018247)	ZCCHC7 (ENSMGAG00000016356)	GRHPR (ENSMGAG00000009118)	ZBTB5 (ENSMGAG00000016120)	POLR1E (ENSMGAG00000009105)	ENSMGAG00000003194	ENSMGAG00000018404	ENSMGAG00000018399	ENSMGAG00000021818	CEP120 (ENSMGAG00000009057) #22	PPIC (ENSMGAG00000009053) #24	SNX24 (ENSMGAG00000021632) #25	SNX2 (ENSMGAG00000009003) #26	SNCAIP (ENSMGAG00000008968) #27	ENSMGAG00000021928	SRFBP1 (ENSMGAG00000008994) #31	ENSMGAG00000017147	ENSMGAG00000004938 #20	ENSMGAG00000020762 #20	ENSMGAG00000009618 #18	ENSMGAG00000019553	PGGT1B (ENSMGAG00000002540)	CCDC112 (ENSMGAG00000022143)	ENSMGAG00000016266	ENSMGAG00000019771
Japanese quail	MODERN SPECIES	699			ENSCJPG00005006244	PAX5 (ENSCJPG00005006237)	ZCCHC7 (ENSCJPG00005006234)	GRHPR (ENSCJPG00005006229)	ZBTB5 (ENSCJPG00005006228)	POLR1E (ENSCJPG00005006224)	ENSCJPG00005006223	DCAF10 (ENSCJPG00005006222)	ENSCJPG00005006221	TRMT10B (ENSCJPG00005006213)	FRMPD1 (ENSCJPG00005006207)	TOMM5 (ENSCJPG00005006206)	ENSCJPG00005006205	CEP120 (ENSCJPG00005006152) #22	PRDM6 (ENSCJPG00005006144) #23	PPIC (ENSCJPG00005006126) #24	SNX24 (ENSCJPG00005006120) #25	SNX2 (ENSCJPG00005006112) #26	SNCAIP (ENSCJPG00005006097) #27	ENSCJPG00005006090	LOX (ENSCJPG00005006086) #30	SRFBP1 (ENSCJPG00005006084) #31	ENSCJPG00005006079	ZNF608 (ENSCJPG00005006067) #20	GRAMD2B (ENSCJPG00005006046) #19	ALDH7A1 (ENSCJPG00005006039) #18	FEM1C (ENSCJPG00005006038)	CCDC112 (ENSCJPG00005006035)	PGGT1B (ENSCJPG00005006034)
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00530000063749.c.b	ENSGT00390000004950	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626.d	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Passeriformes	ANCESTRAL SPECIES	45						ENSGT00940000155826.i	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626.d	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Great tit	MODERN SPECIES	642	ENSPMJG00000005778	ALDOB (ENSPMJG00000005774)	ENSPMJG00000005759	ENSPMJG00000005756	PLPPR1 (ENSPMJG00000005754)	ENSPMJG00000005743	KCNN2 (ENSPMJG00000005733)	TRIM36 (ENSPMJG00000005711)	PGGT1B (ENSPMJG00000005704)	CCDC112 (ENSPMJG00000005699)	FEM1C (ENSPMJG00000005696)	ALDH7A1 (ENSPMJG00000005693) #18	GRAMD2B (ENSPMJG00000005685) #19	ZNF608 (ENSPMJG00000005666) #20	CSNK1G3 (ENSPMJG00000005645) #21	CEP120 (ENSPMJG00000005628) #22	PRDM6 (ENSPMJG00000005625) #23	PPIC (ENSPMJG00000005621) #24	SNX24 (ENSPMJG00000005620) #25	ENSPMJG00000005618	SNX2 (ENSPMJG00000005601) #26	SNCAIP (ENSPMJG00000005584) #27	ENSPMJG00000005581 #28	LOX (ENSPMJG00000005577) #30	SRFBP1 (ENSPMJG00000005571) #31	PRR16 (ENSPMJG00000005559) #34	HSD17B4 (ENSPMJG00000005532) #37	TNFAIP8 (ENSPMJG00000005515)	DMXL1 (ENSPMJG00000005508)	DTWD2 (ENSPMJG00000005505)	SEMA6A (ENSPMJG00000005483)
Passeriformes_d	ANCESTRAL SPECIES	41						ENSGT00940000155826.i	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626.d	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Passeriformes_g	ANCESTRAL SPECIES	49						ENSGT00940000155826.i	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626.d	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Medium ground finch	MODERN SPECIES	107											ENSGFOG00000013614	ALDH7A1 (ENSGFOG00000013622) #18	GRAMD2B (ENSGFOG00000013632) #19	ZNF608 (ENSGFOG00000013634) #20	CSNK1G3 (ENSGFOG00000013637) #21	CEP120 (ENSGFOG00000013643) #22	PRDM6 (ENSGFOG00000013650) #23	PPIC (ENSGFOG00000013654) #24	SNX24 (ENSGFOG00000013657) #25	SNX2 (ENSGFOG00000013660) #26	SNCAIP (ENSGFOG00000013666) #27	ENSGFOG00000013670 #28	ENSGFOG00000013671 #29	SRFBP1 (ENSGFOG00000013674) #31	PRR16 (ENSGFOG00000001896) #34	ENSGFOG00000002084	ENSGFOG00000002194
Passeroidea	ANCESTRAL SPECIES	48						ENSGT00940000155826.i	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626.d	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Zebra finch	MODERN SPECIES	104	SRP19 (ENSTGUG00000001019)	REEP5 (ENSTGUG00000001029)	DCP2 (ENSTGUG00000027852)	MCC (ENSTGUG00000001036)	ENSTGUG00000001058	ENSTGUG00000021625	APBA1 (ENSTGUG00000001066)	PTAR1 (ENSTGUG00000026598)	ENSTGUG00000028875	ENSTGUG00000018427	RHOBTB3 (ENSTGUG00000001089)	RFESD (ENSTGUG00000001096)	ZNF608 (ENSTGUG00000001100) #20	ENSTGUG00000019870	CSNK1G3 (ENSTGUG00000001103) #21	CEP120 (ENSTGUG00000001104) #22	PRDM6 (ENSTGUG00000001115) #23	SNX24 (ENSTGUG00000001121) #25	PPIC (ENSTGUG00000001116) #24	SNX2 (ENSTGUG00000001125) #26	SNCAIP (ENSTGUG00000001137) #27	ENSTGUG00000001143 #28	LOX (ENSTGUG00000025970) #30	SRFBP1 (ENSTGUG00000021782) #31	PRR16 (ENSTGUG00000001152) #34	HSD17B4 (ENSTGUG00000001154) #37	TNFAIP8 (ENSTGUG00000017552)	DMXL1 (ENSTGUG00000017551)	DTWD2 (ENSTGUG00000025374)	ENSTGUG00000023019	SEMA6A (ENSTGUG00000017547)
Common canary	MODERN SPECIES	40	MRPL50 (ENSSCAG00000004936)	PLPPR1 (ENSSCAG00000004941)	RFESD (ENSSCAG00000004952)	RHOBTB3 (ENSSCAG00000004958)	ENSSCAG00000004968	ENSSCAG00000004980	KCNN2 (ENSSCAG00000005002)	TRIM36 (ENSSCAG00000005019)	PGGT1B (ENSSCAG00000005031)	CCDC112 (ENSSCAG00000005045)	ENSSCAG00000005057	ALDH7A1 (ENSSCAG00000005102) #18	GRAMD2B (ENSSCAG00000005170) #19	ZNF608 (ENSSCAG00000005180) #20	CSNK1G3 (ENSSCAG00000005190) #21	CEP120 (ENSSCAG00000005198) #22	PRDM6 (ENSSCAG00000005206) #23	PPIC (ENSSCAG00000005209) #24	SNX24 (ENSSCAG00000005214) #25	ENSSCAG00000005219 #26	SNCAIP (ENSSCAG00000005224) #27	ENSSCAG00000005227 #28	ENSSCAG00000005228 #29	LOX (ENSSCAG00000005233) #30	SRFBP1 (ENSSCAG00000005236) #31	PRR16 (ENSSCAG00000005241) #34	HSD17B4 (ENSSCAG00000005251) #37	TNFAIP8 (ENSSCAG00000005279)	DMXL1 (ENSSCAG00000005285)	DTWD2 (ENSSCAG00000005293)	ENSSCAG00000005295
Flycatcher	MODERN SPECIES	259															CSNK1G3 (ENSFALG00000007491) #21	CEP120 (ENSFALG00000007506) #22	PRDM6 (ENSFALG00000007522) #23	PPIC (ENSFALG00000007527) #24	SNX2 (ENSFALG00000007544) #26	SNCAIP (ENSFALG00000007573) #27	ENSFALG00000007585 #28	ENSFALG00000025195 #28	ENSFALG00000025920 #28	LOX (ENSFALG00000007577) #30	SRFBP1 (ENSFALG00000007595) #31
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00530000063749.c.b	ENSGT00390000004950	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626.d.a	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Golden eagle	MODERN SPECIES	91	DCP2 (ENSACCG00020015827)	MCC (ENSACCG00020015790)	ENSACCG00020015762	PGGT1B (ENSACCG00020015745)	ENSACCG00020015730	KCNN2 (ENSACCG00020015722)	ENSACCG00020015711	ENSACCG00020015551	CCDC112 (ENSACCG00020015397)	FEM1C (ENSACCG00020015384)	ALDH7A1 (ENSACCG00020015339) #18	GRAMD2B (ENSACCG00020015300) #19	ENSACCG00020015288	ZNF608 (ENSACCG00020015276) #20	CSNK1G3 (ENSACCG00020015217) #21	CEP120 (ENSACCG00020015182) #22	PRDM6 (ENSACCG00020015165) #23	PPIC (ENSACCG00020015146) #24	SNX24 (ENSACCG00020015128) #25	SNX2 (ENSACCG00020015075) #26	SNCAIP (ENSACCG00020015035) #27	ENSACCG00020015011 #28	ENSACCG00020015001 #29	LOX (ENSACCG00020014978) #30	SRFBP1 (ENSACCG00020014944) #31	ENSACCG00020014926	PRR16 (ENSACCG00020014916) #34	HSD17B4 (ENSACCG00020014899) #37	TNFAIP8 (ENSACCG00020014874)	DMXL1 (ENSACCG00020014442)	DTWD2 (ENSACCG00020013814)
Kakapo	MODERN SPECIES	19	SRP19 (ENSSHBG00005003764)	REEP5 (ENSSHBG00005003772)	DCP2 (ENSSHBG00005003786)	MCC (ENSSHBG00005003810)	YTHDC2 (ENSSHBG00005003860)	ENSSHBG00005003894	TRIM36 (ENSSHBG00005003917)	PGGT1B (ENSSHBG00005003937)	CCDC112 (ENSSHBG00005003955)	ENSSHBG00005003972	ALDH7A1 (ENSSHBG00005003993) #18	GRAMD2B (ENSSHBG00005000663) #19	ENSSHBG00005000664	ZNF608 (ENSSHBG00005000665) #20	CSNK1G3 (ENSSHBG00005009316) #21	CEP120 (ENSSHBG00005009352) #22	PRDM6 (ENSSHBG00005009704) #23	PPIC (ENSSHBG00005009713) #24	SNX24 (ENSSHBG00005009723) #25	SNX2 (ENSSHBG00005009745) #26	SNCAIP (ENSSHBG00005009782) #27	ENSSHBG00005009803 #28	ENSSHBG00005009811	LOX (ENSSHBG00005009825) #30	SRFBP1 (ENSSHBG00005009842) #31	PRR16 (ENSSHBG00005009872) #34	HSD17B4 (ENSSHBG00005009890) #37	TNFAIP8 (ENSSHBG00005009903)	DMXL1 (ENSSHBG00005011471)	DTWD2 (ENSSHBG00005019284)	ENSSHBG00005019285
African ostrich	MODERN SPECIES	947	FBN2 (ENSSCUG00000017154) #8	SLC12A2 (ENSSCUG00000017146) #9	CTXN3 (ENSSCUG00000017137) #10	PRRC1 (ENSSCUG00000017131) #11	MEGF10 (ENSSCUG00000017126) #12	ENSSCUG00000017123	MARCHF3 (ENSSCUG00000017121) #14	LMNB1 (ENSSCUG00000017119) #15	TEX43 (ENSSCUG00000017118) #16	PHAX (ENSSCUG00000017117) #17	ALDH7A1 (ENSSCUG00000017106) #18	GRAMD2B (ENSSCUG00000017097) #19	ENSSCUG00000017094	ZNF608 (ENSSCUG00000017071) #20	CSNK1G3 (ENSSCUG00000017038) #21	CEP120 (ENSSCUG00000017034) #22	PRDM6 (ENSSCUG00000017030) #23	PPIC (ENSSCUG00000017027) #24	SNX24 (ENSSCUG00000017026) #25	SNX2 (ENSSCUG00000017019) #26	SNCAIP (ENSSCUG00000017013) #27	ENSSCUG00000017010 #28	ENSSCUG00000017009 #29	LOX (ENSSCUG00000017007) #30	SRFBP1 (ENSSCUG00000017006) #31
Australian saltwater crocodile	MODERN SPECIES	67	PAX5 (ENSCPRG00005012238)	ENSCPRG00005012215	ZCCHC7 (ENSCPRG00005012210)	ENSCPRG00005012191	GRHPR (ENSCPRG00005012185)	ZBTB5 (ENSCPRG00005012181)	POLR1E (ENSCPRG00005012160)	FBXO10 (ENSCPRG00005012151)	ENSCPRG00005012147	DCAF10 (ENSCPRG00005012128)	ENSCPRG00005012124	TRMT10B (ENSCPRG00005012111)	FRMPD1 (ENSCPRG00005012094)	TOMM5 (ENSCPRG00005012084)	IGFBPL1 (ENSCPRG00005012076)	CEP120 (ENSCPRG00005012069) #22	PRDM6 (ENSCPRG00005012027) #23	PPIC (ENSCPRG00005012019) #24	SNX24 (ENSCPRG00005012013) #25	SNX2 (ENSCPRG00005012003) #26	SNCAIP (ENSCPRG00005011992) #27	ENSCPRG00005011990 #28	ENSCPRG00005011982 #29	LOX (ENSCPRG00005011948) #30	SRFBP1 (ENSCPRG00005011936) #31	ENSCPRG00005011916	ZNF608 (ENSCPRG00005011899) #20	GRAMD2B (ENSCPRG00005011882) #19	ALDH7A1 (ENSCPRG00005011875) #18	PHAX (ENSCPRG00005011866) #17	ENSCPRG00005011864
Cryptodira	ANCESTRAL SPECIES	9	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Emydidae	ANCESTRAL SPECIES	20	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31
painted turtle	MODERN SPECIES	800														ZNF608 (ENSCPBG00000013584) #20	CSNK1G3 (ENSCPBG00000013581) #21	CEP120 (ENSCPBG00000013575) #22	PRDM6 (ENSCPBG00000013566) #23	PPIC (ENSCPBG00000013564) #24	ENSCPBG00000013562	SNX24 (ENSCPBG00000013559) #25	SNX2 (ENSCPBG00000013551) #26	SNCAIP (ENSCPBG00000013547) #27	ENSCPBG00000013545	ENSCPBG00000013538 #28	LOX (ENSCPBG00000013534) #30	ENSCPBG00000013472	PRR16 (ENSCPBG00000013468) #34
Three-toed box turtle	MODERN SPECIES	50	ENSTMTG00000016930 #8	ENSTMTG00000016961 #8	SLC12A2 (ENSTMTG00000017278) #9	CTXN3 (ENSTMTG00000020877) #10	PRRC1 (ENSTMTG00000020885) #11	MEGF10 (ENSTMTG00000020898) #12	C5orf63 (ENSTMTG00000020928) #13	MARCHF3 (ENSTMTG00000020934) #14	LMNB1 (ENSTMTG00000020940) #15	TEX43 (ENSTMTG00000020952) #16	PHAX (ENSTMTG00000020963) #17	ALDH7A1 (ENSTMTG00000020972) #18	GRAMD2B (ENSTMTG00000020992) #19	ZNF608 (ENSTMTG00000021021) #20	CSNK1G3 (ENSTMTG00000021027) #21	CEP120 (ENSTMTG00000021055) #22	PRDM6 (ENSTMTG00000021178) #23	PPIC (ENSTMTG00000021187) #24	SNX24 (ENSTMTG00000021193) #25	SNX2 (ENSTMTG00000021205) #26	SNCAIP (ENSTMTG00000021216) #27	ENSTMTG00000021224 #28	ENSTMTG00000021232 #29	LOX (ENSTMTG00000021241) #30	SRFBP1 (ENSTMTG00000021251) #31
Testudinidae	ANCESTRAL SPECIES	15	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00390000001189.b.f
Abingdon island giant tortoise	MODERN SPECIES	1551													ENSCABG00000020178	ZNF608 (ENSCABG00000020180) #20	CSNK1G3 (ENSCABG00000020190) #21	CEP120 (ENSCABG00000020213) #22	PRDM6 (ENSCABG00000020312) #23	PPIC (ENSCABG00000020313) #24	SNX24 (ENSCABG00000020314) #25	SNX2 (ENSCABG00000020316) #26	ENSCABG00000020319 #27	ENSCABG00000020321 #28	ENSCABG00000020322 #29	LOX (ENSCABG00000020323) #30	SRFBP1 (ENSCABG00000020324) #31	YIPF4 (ENSCABG00000020325)	ENSCABG00000020328	ENSCABG00000020330	ENSCABG00000020331	ENSCABG00000020332
Goode s thornscrub tortoise	MODERN SPECIES	20	ENSGEVG00005004035 #8	SLC12A2 (ENSGEVG00005004873) #9	CTXN3 (ENSGEVG00005007745) #10	PRRC1 (ENSGEVG00005007771) #11	MEGF10 (ENSGEVG00005007808) #12	C5orf63 (ENSGEVG00005007907) #13	MARCHF3 (ENSGEVG00005007931) #14	LMNB1 (ENSGEVG00005007963) #15	TEX43 (ENSGEVG00005008005) #16	PHAX (ENSGEVG00005008064) #17	ALDH7A1 (ENSGEVG00005008089) #18	ENSGEVG00005008170	GRAMD2B (ENSGEVG00005008205) #19	ZNF608 (ENSGEVG00005008344) #20	CSNK1G3 (ENSGEVG00005008459) #21	CEP120 (ENSGEVG00005008549) #22	PRDM6 (ENSGEVG00005009008) #23	PPIC (ENSGEVG00005009084) #24	SNX24 (ENSGEVG00005009133) #25	SNX2 (ENSGEVG00005009245) #26	ENSGEVG00005009293 #27	ENSGEVG00005009355 #28	ENSGEVG00005009399 #29	LOX (ENSGEVG00005009459) #30	SRFBP1 (ENSGEVG00005009571) #31	PRR16 (ENSGEVG00005009592) #34	ENSGEVG00005009622	HSD17B4 (ENSGEVG00005009648) #37	TNFAIP8 (ENSGEVG00005009719)	DMXL1 (ENSGEVG00005009753)	DTWD2 (ENSGEVG00005009969)
Chinese turtle	MODERN SPECIES	1607		GPN1 (ENSPSIG00000015295)	ENSPSIG00000014581	SLC30A3 (ENSPSIG00000014488)	PRRC1 (ENSPSIG00000014481) #11	MEGF10 (ENSPSIG00000013171) #12	C5orf63 (ENSPSIG00000013157) #13	MARCHF3 (ENSPSIG00000012766) #14	LMNB1 (ENSPSIG00000011710) #15	ENSPSIG00000011691 #16	PHAX (ENSPSIG00000011345) #17	ALDH7A1 (ENSPSIG00000008652) #18	GRAMD2B (ENSPSIG00000006243) #19	ZNF608 (ENSPSIG00000015457) #20	CSNK1G3 (ENSPSIG00000014585) #21	CEP120 (ENSPSIG00000014102) #22
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	2166																ENSLACG00000008864 #22	ENSLACG00000007723	PRDM6 (ENSLACG00000003287) #23	PPIC (ENSLACG00000001486) #24
Coelacanth	MODERN SPECIES	3886																CEP120 (ENSLACG00000001746) #22