Vertebrata	ANCESTRAL SPECIES	100															ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23
Gnathostomata	ANCESTRAL SPECIES	182											ENSGT00940000157199 #15	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208 #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34
Euteleostomi	ANCESTRAL SPECIES	1	ENSGT00390000006753.B	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565	ENSGT00390000001500
Sarcopterygii	ANCESTRAL SPECIES	1	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565	ENSGT00390000001500
Tetrapoda	ANCESTRAL SPECIES	2	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Amniota	ANCESTRAL SPECIES	4	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Mammalia	ANCESTRAL SPECIES	5	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Theria	ANCESTRAL SPECIES	11	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Eutheria	ANCESTRAL SPECIES	6	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Atlantogenata	ANCESTRAL SPECIES		ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Afrotheria	ANCESTRAL SPECIES	73	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Afrotheria_a	ANCESTRAL SPECIES	72	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Elephant	MODERN SPECIES	2	SLC27A6 (ENSLAFG00000002158) #7	FBN2 (ENSLAFG00000012286) #8	SLC12A2 (ENSLAFG00000002532) #9	CTXN3 (ENSLAFG00000003453) #10	PRRC1 (ENSLAFG00000022605) #11	MEGF10 (ENSLAFG00000018279) #12	C5orf63 (ENSLAFG00000012527) #13	MARCHF3 (ENSLAFG00000017629) #14	LMNB1 (ENSLAFG00000017617) #15	TEX43 (ENSLAFG00000015284) #16	PHAX (ENSLAFG00000021711) #17	ALDH7A1 (ENSLAFG00000018522) #18	GRAMD2B (ENSLAFG00000018520) #19	ZNF608 (ENSLAFG00000015124) #20	CSNK1G3 (ENSLAFG00000007774) #21	CEP120 (ENSLAFG00000010548) #22	PRDM6 (ENSLAFG00000000396) #23	PPIC (ENSLAFG00000012206) #24	SNX24 (ENSLAFG00000008244) #25	SNX2 (ENSLAFG00000013015) #26	SNCAIP (ENSLAFG00000011510) #27	ENSLAFG00000026326 #28	ENSLAFG00000011621 #29	LOX (ENSLAFG00000015308) #30	SRFBP1 (ENSLAFG00000015303) #31	FTMT (ENSLAFG00000028951) #32	ENSLAFG00000028219 #33	PRR16 (ENSLAFG00000002441) #34	ENSLAFG00000028710 #35	FAM170A (ENSLAFG00000018269) #36	HSD17B4 (ENSLAFG00000017053) #37
Hyrax	MODERN SPECIES	5237																CEP120 (ENSPCAG00000011176) #22
Tenrec	MODERN SPECIES	6214																ENSETEG00000009564 #22
Xenarthra	ANCESTRAL SPECIES	859														ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25
Sloth	MODERN SPECIES	5690																CEP120 (ENSCHOG00000003661) #22
Armadillo	MODERN SPECIES	1425											ENSDNOG00000039495	ZNF608 (ENSDNOG00000019392) #20	ENSDNOG00000031213	ENSDNOG00000046866	CSNK1G3 (ENSDNOG00000012155) #21	CEP120 (ENSDNOG00000012028) #22	PRDM6 (ENSDNOG00000006337) #23	PPIC (ENSDNOG00000006330) #24	SNX24 (ENSDNOG00000038511) #25
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000155742 #9	ENSGT00940000170965	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Glires	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Rodentia	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Sciuridae	ANCESTRAL SPECIES	18	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Marmotini	ANCESTRAL SPECIES	50				ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Marmotini_b	ANCESTRAL SPECIES	190												ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Arctic ground squirrel	MODERN SPECIES	168														ENSUPAG00010003607	CSNK1G3 (ENSUPAG00010003616) #21	CEP120 (ENSUPAG00010003650) #22	PRDM6 (ENSUPAG00010003694) #23	PPIC (ENSUPAG00010003724) #24	SNX24 (ENSUPAG00010003736) #25	ENSUPAG00010003751 #26	SNCAIP (ENSUPAG00010003776) #27	ENSUPAG00010003843 #28	ENSUPAG00010003847 #29	LOX (ENSUPAG00010003850) #30	SRFBP1 (ENSUPAG00010003868) #31	ENSUPAG00010003888	FTMT (ENSUPAG00010003933) #32	PRR16 (ENSUPAG00010003942) #34	ENSUPAG00010003954
Squirrel	MODERN SPECIES	175												ALDH7A1 (ENSSTOG00000004369) #18	GRAMD2B (ENSSTOG00000021703) #19	ZNF608 (ENSSTOG00000006518) #20	CSNK1G3 (ENSSTOG00000002147) #21	CEP120 (ENSSTOG00000004518) #22	PRDM6 (ENSSTOG00000006419) #23	PPIC (ENSSTOG00000006407) #24	SNX24 (ENSSTOG00000006391) #25	ENSSTOG00000025879	SNX2 (ENSSTOG00000006362) #26	SNCAIP (ENSSTOG00000024491) #27	ENSSTOG00000016375 #28	LOX (ENSSTOG00000016372) #30	SRFBP1 (ENSSTOG00000029184) #31	FTMT (ENSSTOG00000022248) #32	PRR16 (ENSSTOG00000003722) #34	FAM170A (ENSSTOG00000026053) #36
Alpin marmot	MODERN SPECIES		PRRC1 (ENSMMMG00000019979) #11	MEGF10 (ENSMMMG00000019988) #12	ENSMMMG00000020005	C5orf63 (ENSMMMG00000020014) #13	MARCHF3 (ENSMMMG00000020035) #14	LMNB1 (ENSMMMG00000020037) #15	ENSMMMG00000020047	TEX43 (ENSMMMG00000020056) #16	PHAX (ENSMMMG00000020058) #17	ALDH7A1 (ENSMMMG00000020066) #18	GRAMD2B (ENSMMMG00000020111) #19	ZNF608 (ENSMMMG00000020134) #20	ENSMMMG00000020141	ENSMMMG00000020156	CSNK1G3 (ENSMMMG00000020164) #21	CEP120 (ENSMMMG00000020173) #22	PRDM6 (ENSMMMG00000020196) #23	PPIC (ENSMMMG00000020213) #24	SNX24 (ENSMMMG00000020217) #25	SNX2 (ENSMMMG00000020244) #26	ENSMMMG00000020259	SNCAIP (ENSMMMG00000020272) #27	ENSMMMG00000020380 #28	ENSMMMG00000020385 #29	LOX (ENSMMMG00000020396) #30	SRFBP1 (ENSMMMG00000020429) #31	ENSMMMG00000020462	ENSMMMG00000020476
Eurasian red squirrel	MODERN SPECIES	15	CTXN3 (ENSSVLG00005005087) #10	PRRC1 (ENSSVLG00005004991) #11	MEGF10 (ENSSVLG00005004843) #12	C5orf63 (ENSSVLG00005004783) #13	MARCHF3 (ENSSVLG00005004764) #14	LMNB1 (ENSSVLG00005004744) #15	ENSSVLG00005004726	TEX43 (ENSSVLG00005004712) #16	PHAX (ENSSVLG00005004699) #17	ALDH7A1 (ENSSVLG00005004589) #18	GRAMD2B (ENSSVLG00005004428) #19	ZNF608 (ENSSVLG00005004336) #20	ENSSVLG00005004297	CSNK1G3 (ENSSVLG00005004142) #21	ENSSVLG00005004089	CEP120 (ENSSVLG00005004058) #22	PRDM6 (ENSSVLG00005004034) #23	PPIC (ENSSVLG00005004009) #24	SNX24 (ENSSVLG00005003984) #25	SNX2 (ENSSVLG00005003949) #26	ENSSVLG00005003932	SNCAIP (ENSSVLG00005003846) #27	ENSSVLG00005003788 #28	ENSSVLG00005003776	ENSSVLG00005003755 #29	LOX (ENSSVLG00005003736) #30	SRFBP1 (ENSSVLG00005003722) #31	FTMT (ENSSVLG00005003703) #32	PRR16 (ENSSVLG00005015533) #34	ENSSVLG00005015499	ENSSVLG00005015460
Hystricomorpha	ANCESTRAL SPECIES	27	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32
Hystricomorpha_a	ANCESTRAL SPECIES	24	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32
Hystricomorpha_b	ANCESTRAL SPECIES	57	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798.c #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31
Long-tailed chinchilla	MODERN SPECIES	228							LMNB1 (ENSCLAG00000002790) #15	TEX43 (ENSCLAG00000002739) #16	PHAX (ENSCLAG00000002608) #17	ALDH7A1 (ENSCLAG00000002348) #18	ENSCLAG00000002267	GRAMD2B (ENSCLAG00000001599) #19	ZNF608 (ENSCLAG00000001509) #20	ENSCLAG00000001464	CSNK1G3 (ENSCLAG00000001361) #21	CEP120 (ENSCLAG00000002139) #22	PRDM6 (ENSCLAG00000001454) #23	PPIC (ENSCLAG00000001442) #24	SNX24 (ENSCLAG00000001360) #25	ENSCLAG00000001285 #26	ENSCLAG00000001221	SNCAIP (ENSCLAG00000005844) #27	ENSCLAG00000004339 #28	LOX (ENSCLAG00000004052) #30	SRFBP1 (ENSCLAG00000003630) #31
Degu	MODERN SPECIES	81	MEGF10 (ENSODEG00000005872) #12	C5orf63 (ENSODEG00000007167) #13	MARCHF3 (ENSODEG00000006696) #14	LMNB1 (ENSODEG00000006242) #15	TEX43 (ENSODEG00000006869) #16	PHAX (ENSODEG00000006349) #17	ENSODEG00000009578	ALDH7A1 (ENSODEG00000006140) #18	GRAMD2B (ENSODEG00000006633) #19	ZNF608 (ENSODEG00000006507) #20	ENSODEG00000006728	ENSODEG00000008631	ENSODEG00000007055	CSNK1G3 (ENSODEG00000007615) #21	ENSODEG00000006461	CEP120 (ENSODEG00000007309) #22	PRDM6 (ENSODEG00000006943) #23	PPIC (ENSODEG00000006665) #24	SNX24 (ENSODEG00000006952) #25	ENSODEG00000009871 #26	ENSODEG00000010513	SNCAIP (ENSODEG00000008243) #27	ENSODEG00000007498 #28	ENSODEG00000007776	LOX (ENSODEG00000008479) #30	SRFBP1 (ENSODEG00000007258) #31	ENSODEG00000006346	ENSODEG00000005979	ENSODEG00000009464	ENSODEG00000006891
Guinea pig	MODERN SPECIES	6	CTXN3 (ENSCPOG00000031953) #10	PRRC1 (ENSCPOG00000010724) #11	MEGF10 (ENSCPOG00000003151) #12	C5orf63 (ENSCPOG00000039359) #13	ENSCPOG00000022550	MARCHF3 (ENSCPOG00000032636) #14	LMNB1 (ENSCPOG00000013383) #15	TEX43 (ENSCPOG00000013123) #16	PHAX (ENSCPOG00000026981) #17	ALDH7A1 (ENSCPOG00000013120) #18	GRAMD2B (ENSCPOG00000033571) #19	ENSCPOG00000039938	ZNF608 (ENSCPOG00000007196) #20	CSNK1G3 (ENSCPOG00000007642) #21	ENSCPOG00000026604	CEP120 (ENSCPOG00000023434) #22	PRDM6 (ENSCPOG00000004258) #23	PPIC (ENSCPOG00000038580) #24	SNX24 (ENSCPOG00000031081) #25	SNX2 (ENSCPOG00000010095) #26	SNCAIP (ENSCPOG00000003517) #27	ENSCPOG00000015378 #28	ENSCPOG00000023049 #30	SRFBP1 (ENSCPOG00000004695) #31	FTMT (ENSCPOG00000021524) #32	ENSCPOG00000039823	ENSCPOG00000031274	ENSCPOG00000037919	ATP12A (ENSCPOG00000003407)	CENPJ (ENSCPOG00000012145)	MPHOSPH8 (ENSCPOG00000002864)
Naked mole-rat female	MODERN SPECIES	25	LMNB1 (ENSHGLG00000004108) #15	ENSHGLG00000049826	TEX43 (ENSHGLG00000004450) #16	PHAX (ENSHGLG00000004831) #17	ENSHGLG00000020456	ENSHGLG00000037194	ALDH7A1 (ENSHGLG00000007013) #18	GRAMD3 (ENSHGLG00000007988) #19	ENSHGLG00000048613	ENSHGLG00000045729	ENSHGLG00000044491	ENSHGLG00000045823	ZNF608 (ENSHGLG00000015363) #20	ENSHGLG00000045496	CSNK1G3 (ENSHGLG00000014887) #21	CEP120 (ENSHGLG00000013236) #22	ENSHGLG00000046905	ENSHGLG00000015465	ENSHGLG00000044678	PRDM6 (ENSHGLG00000015857) #23	PPIC (ENSHGLG00000003798) #24	SNX24 (ENSHGLG00000044370) #25	SNX2 (ENSHGLG00000004121) #26	ENSHGLG00000004284	SNCAIP (ENSHGLG00000004400) #27	ENSHGLG00000005486 #28	ENSHGLG00000040922	ENSHGLG00000006947 #30	SGK196 (ENSHGLG00000000861)	FNTA (ENSHGLG00000000048)	ENSHGLG00000038726
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT01000000214434.B.b.f	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT01000000214434.B.b.f	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Muroidea	ANCESTRAL SPECIES	4	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Muroidea_A	ANCESTRAL SPECIES	18	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Cricetidae	ANCESTRAL SPECIES	18	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Cricetidae_B	ANCESTRAL SPECIES	15	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Northern American deer mouse	MODERN SPECIES	10	Ctxn3 (ENSPEMG00000030766) #10	ENSPEMG00000026741	Prrc1 (ENSPEMG00000009474) #11	Megf10 (ENSPEMG00000014062) #12	C330018D20Rik (ENSPEMG00000024261) #13	ENSPEMG00000030304	Marchf3 (ENSPEMG00000001664) #14	Lmnb1 (ENSPEMG00000021049) #15	Tex43 (ENSPEMG00000029586) #16	Phax (ENSPEMG00000011173) #17	Aldh7a1 (ENSPEMG00000005818) #18	Gramd3 (ENSPEMG00000000293) #19	ENSPEMG00000027705	Zfp608 (ENSPEMG00000009185) #20	Csnk1g3 (ENSPEMG00000019782) #21	Cep120 (ENSPEMG00000009773) #22	Prdm6 (ENSPEMG00000019671) #23	Ppic (ENSPEMG00000019562) #24	Snx24 (ENSPEMG00000019816) #25	Snx2 (ENSPEMG00000019987) #26	Sncaip (ENSPEMG00000013269) #27	Gykl1 (ENSPEMG00000019742)	1700034E13Rik (ENSPEMG00000011011) #28	ENSPEMG00000009439 #29	Lox (ENSPEMG00000009745) #30	Srfbp1 (ENSPEMG00000030711) #31	Ftmt (ENSPEMG00000012587) #32	ENSPEMG00000012557	Prr16 (ENSPEMG00000019646) #34	ENSPEMG00000012704	Pudp (ENSPEMG00000024589)
Prairie vole	MODERN SPECIES	5	Slc12a2 (ENSMOCG00000006368) #9	Ccdc192 (ENSMOCG00000001024)	Ctxn3 (ENSMOCG00000016702) #10	Prrc1 (ENSMOCG00000022749) #11	Megf10 (ENSMOCG00000006860) #12	ENSMOCG00000004556	C330018D20Rik (ENSMOCG00000017421) #13	Marchf3 (ENSMOCG00000015860) #14	Lmnb1 (ENSMOCG00000017413) #15	Tex43 (ENSMOCG00000005675) #16	Phax (ENSMOCG00000020021) #17	Aldh7a1 (ENSMOCG00000012661) #18	Gramd3 (ENSMOCG00000005419) #19	Zfp608 (ENSMOCG00000013642) #20	Csnk1g3 (ENSMOCG00000022390) #21	Cep120 (ENSMOCG00000021787) #22	Prdm6 (ENSMOCG00000004247) #23	Ppic (ENSMOCG00000022572) #24	Snx24 (ENSMOCG00000014562) #25	Snx2 (ENSMOCG00000020325) #26	Sncaip (ENSMOCG00000000381) #27	1700034E13Rik (ENSMOCG00000007534) #28	Lox (ENSMOCG00000001454) #30	Srfbp1 (ENSMOCG00000006206) #31	ENSMOCG00000001952	Ftmt (ENSMOCG00000001054) #32	Prr16 (ENSMOCG00000021267) #34	Fam170a (ENSMOCG00000018167) #36	Hsd17b4 (ENSMOCG00000017979) #37	Tnfaip8 (ENSMOCG00000016075)	Dmxl1 (ENSMOCG00000000362)
Cricetinae	ANCESTRAL SPECIES	14	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Chinese hamster chok1gshd	MODERN SPECIES	153	Ccdc192 (ENSCGRG00001017920)	Ctxn3 (ENSCGRG00001003792) #10	Prrc1 (ENSCGRG00001021725) #11	Megf10 (ENSCGRG00001016594) #12	C330018D20Rik (ENSCGRG00001000564) #13	Marchf3 (ENSCGRG00001018443) #14	Lmnb1 (ENSCGRG00001023736) #15	Tex43 (ENSCGRG00001000467) #16	Phax (ENSCGRG00001022020) #17	ENSCGRG00001012154 #18	ENSCGRG00001011295	Gramd3 (ENSCGRG00001014891) #19	ENSCGRG00001013902	Zfp608 (ENSCGRG00001015219) #20	Csnk1g3 (ENSCGRG00001024465) #21	Cep120 (ENSCGRG00001017499) #22	Prdm6 (ENSCGRG00001016821) #23	Ppic (ENSCGRG00001008818) #24	Snx24 (ENSCGRG00001011694) #25	ENSCGRG00001023240 #26	Sncaip (ENSCGRG00001013058) #27	Gykl1 (ENSCGRG00001001492)	1700034E13Rik (ENSCGRG00001001918) #28	Zfp474 (ENSCGRG00001002746)	Lox (ENSCGRG00001014607) #30	Srfbp1 (ENSCGRG00001000718) #31	Ftmt (ENSCGRG00001006087) #32	ENSCGRG00001012009	Prr16 (ENSCGRG00001005826) #34	ENSCGRG00001003744	Pudp (ENSCGRG00001004277)
Golden Hamster	MODERN SPECIES	634	Ccdc192 (ENSMAUG00000011938)	Ctxn3 (ENSMAUG00000010112) #10	Prrc1 (ENSMAUG00000011136) #11	Megf10 (ENSMAUG00000004517) #12	C330018D20Rik (ENSMAUG00000011803) #13	Marchf3 (ENSMAUG00000012056) #14	Lmnb1 (ENSMAUG00000010471) #15	Tex43 (ENSMAUG00000013359) #16	Phax (ENSMAUG00000014638) #17	Aldh7a1 (ENSMAUG00000001614) #18	Gramd3 (ENSMAUG00000012430) #19	ENSMAUG00000014738	ENSMAUG00000013888	Zfp608 (ENSMAUG00000014536) #20	Csnk1g3 (ENSMAUG00000015117) #21	Cep120 (ENSMAUG00000016424) #22	Prdm6 (ENSMAUG00000016287) #23	Ppic (ENSMAUG00000016808) #24	Snx24 (ENSMAUG00000017166) #25	ENSMAUG00000017250	Dpep3 (ENSMAUG00000017410)	Snx2 (ENSMAUG00000018379) #26	ENSMAUG00000004463 #27	Gykl1 (ENSMAUG00000005428)	1700034E13Rik (ENSMAUG00000007545) #28	Lox (ENSMAUG00000008060) #30	Srfbp1 (ENSMAUG00000009431) #31	Ftmt (ENSMAUG00000017687) #32	Prr16 (ENSMAUG00000009966) #34	Fam170a (ENSMAUG00000010368) #36	Hsd17b4 (ENSMAUG00000011187) #37
Murinae	ANCESTRAL SPECIES	17	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000014753.g	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Mus	ANCESTRAL SPECIES	19	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000014753.g	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Mus_A	ANCESTRAL SPECIES	19	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000014753.g	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Mus_B	ANCESTRAL SPECIES	19	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000014753.g	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Mouse	MODERN SPECIES	9	Fbn2 (ENSMUSG00000024598) #8	Slc12a2 (ENSMUSG00000024597) #9	Ccdc192 (ENSMUSG00000058925)	Ctxn3 (ENSMUSG00000069372) #10	Prrc1 (ENSMUSG00000024594) #11	Megf10 (ENSMUSG00000024593) #12	C330018D20Rik (ENSMUSG00000024592) #13	Marchf3 (ENSMUSG00000032656) #14	Lmnb1 (ENSMUSG00000024590) #15	Tex43 (ENSMUSG00000032900) #16	Phax (ENSMUSG00000008301) #17	Aldh7a1 (ENSMUSG00000053644) #18	Gramd3 (ENSMUSG00000001700) #19	Zfp608 (ENSMUSG00000052713) #20	Csnk1g3 (ENSMUSG00000073563) #21	Cep120 (ENSMUSG00000048799) #22	Prdm6 (ENSMUSG00000069378) #23	Ppic (ENSMUSG00000024538) #24	Snx24 (ENSMUSG00000024535) #25	Snx2 (ENSMUSG00000034484) #26	Gm50457 (ENSMUSG00000118407)	Sncaip (ENSMUSG00000024534) #27	Gykl1 (ENSMUSG00000053624)	1700034E13Rik (ENSMUSG00000024532) #28	Zfp474 (ENSMUSG00000046886)	Lox (ENSMUSG00000024529) #30	Srfbp1 (ENSMUSG00000024528) #31	Ftmt (ENSMUSG00000024510) #32	Prr16 (ENSMUSG00000073565) #34	Pudp (ENSMUSG00000048875)	Fam170a (ENSMUSG00000035420) #36
Mus_C	ANCESTRAL SPECIES	16	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000014753.g	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
spretus	MODERN SPECIES	9	Fbn2 (MGP_SPRETEiJ_G0023209) #8	Slc12a2 (MGP_SPRETEiJ_G0023208) #9	Ccdc192 (MGP_SPRETEiJ_G0023207)	Ctxn3 (MGP_SPRETEiJ_G0023206) #10	Prrc1 (MGP_SPRETEiJ_G0023205) #11	Megf10 (MGP_SPRETEiJ_G0023204) #12	C330018D20Rik (MGP_SPRETEiJ_G0023203) #13	Marchf3 (MGP_SPRETEiJ_G0023202) #14	Lmnb1 (MGP_SPRETEiJ_G0023201) #15	Tex43 (MGP_SPRETEiJ_G0023200) #16	Phax (MGP_SPRETEiJ_G0023199) #17	Aldh7a1 (MGP_SPRETEiJ_G0023198) #18	Gramd3 (MGP_SPRETEiJ_G0023197) #19	Zfp608 (MGP_SPRETEiJ_G0023196) #20	Csnk1g3 (MGP_SPRETEiJ_G0023195) #21	Cep120 (MGP_SPRETEiJ_G0023194) #22	Prdm6 (MGP_SPRETEiJ_G0023193) #23	Ppic (MGP_SPRETEiJ_G0023192) #24	Snx24 (MGP_SPRETEiJ_G0023191) #25	Snx2 (MGP_SPRETEiJ_G0023190) #26	Sncaip (MGP_SPRETEiJ_G0023189) #27	Gykl1 (MGP_SPRETEiJ_G0023188)	1700034E13Rik (MGP_SPRETEiJ_G0023187) #28	Zfp474 (MGP_SPRETEiJ_G0023186)	Lox (MGP_SPRETEiJ_G0023185) #30	Srfbp1 (MGP_SPRETEiJ_G0023184) #31	Ftmt (MGP_SPRETEiJ_G0023183) #32	MGP_SPRETEiJ_G0023182	Prr16 (MGP_SPRETEiJ_G0023181) #34	Pudp (MGP_SPRETEiJ_G0023180)	Fam170a (MGP_SPRETEiJ_G0023179) #36
Steppe mouse	MODERN SPECIES	57								Phax (ENSMSIG00000026745) #17	ENSMSIG00000026608 #18	Gramd3 (ENSMSIG00000026583) #19	ENSMSIG00000026575	ENSMSIG00000026568	Zfp608 (ENSMSIG00000026522) #20	ENSMSIG00000026505 #21	ENSMSIG00000026498 #21	Cep120 (ENSMSIG00000026475) #22	Prdm6 (ENSMSIG00000026448) #23	Ppic (ENSMSIG00000026437) #24	Snx24 (ENSMSIG00000026431) #25	Snx2 (ENSMSIG00000026381) #26	ENSMSIG00000026374	Sncaip (ENSMSIG00000026142) #27	Gykl1 (ENSMSIG00000026133)	ENSMSIG00000026098 #28	Lox (ENSMSIG00000026066) #30	Srfbp1 (ENSMSIG00000026058) #31	Ftmt (ENSMSIG00000026052) #32
Ryukyu mouse	MODERN SPECIES	9	Fbn2 (MGP_CAROLIEiJ_G0022296) #8	Slc12a2 (MGP_CAROLIEiJ_G0022295) #9	MGP_CAROLIEiJ_G0022294	Ctxn3 (MGP_CAROLIEiJ_G0022293) #10	Prrc1 (MGP_CAROLIEiJ_G0022292) #11	Megf10 (MGP_CAROLIEiJ_G0022291) #12	C330018D20Rik (MGP_CAROLIEiJ_G0022290) #13	Marchf3 (MGP_CAROLIEiJ_G0022289) #14	Lmnb1 (MGP_CAROLIEiJ_G0022288) #15	Tex43 (MGP_CAROLIEiJ_G0022287) #16	Phax (MGP_CAROLIEiJ_G0022286) #17	Aldh7a1 (MGP_CAROLIEiJ_G0022285) #18	Gramd3 (MGP_CAROLIEiJ_G0022284) #19	Zfp608 (MGP_CAROLIEiJ_G0022283) #20	Csnk1g3 (MGP_CAROLIEiJ_G0022282) #21	Cep120 (MGP_CAROLIEiJ_G0022281) #22	MGP_CAROLIEiJ_G0022280 #23	Ppic (MGP_CAROLIEiJ_G0022279) #24	Snx24 (MGP_CAROLIEiJ_G0022278) #25	Snx2 (MGP_CAROLIEiJ_G0022277) #26	Sncaip (MGP_CAROLIEiJ_G0022276) #27	Gykl1 (MGP_CAROLIEiJ_G0022275)	1700034E13Rik (MGP_CAROLIEiJ_G0022274) #28	Zfp474 (MGP_CAROLIEiJ_G0022273)	Lox (MGP_CAROLIEiJ_G0022272) #30	Srfbp1 (MGP_CAROLIEiJ_G0022271) #31	Ftmt (MGP_CAROLIEiJ_G0022270) #32	Prr16 (MGP_CAROLIEiJ_G0022269) #34	Pudp (MGP_CAROLIEiJ_G0022268)	Fam170a (MGP_CAROLIEiJ_G0022267) #36	Hsd17b4 (MGP_CAROLIEiJ_G0022266) #37
Shrew mouse	MODERN SPECIES	6	Fbn2 (MGP_PahariEiJ_G0019029) #8	Slc12a2 (MGP_PahariEiJ_G0019028) #9	Ccdc192 (MGP_PahariEiJ_G0019027)	Ctxn3 (MGP_PahariEiJ_G0019026) #10	Prrc1 (MGP_PahariEiJ_G0019025) #11	Megf10 (MGP_PahariEiJ_G0019024) #12	C330018D20Rik (MGP_PahariEiJ_G0019023) #13	Marchf3 (MGP_PahariEiJ_G0019022) #14	Lmnb1 (MGP_PahariEiJ_G0019021) #15	Tex43 (MGP_PahariEiJ_G0019020) #16	Phax (MGP_PahariEiJ_G0019019) #17	Aldh7a1 (MGP_PahariEiJ_G0019018) #18	Gramd3 (MGP_PahariEiJ_G0019017) #19	Zfp608 (MGP_PahariEiJ_G0019016) #20	Csnk1g3 (MGP_PahariEiJ_G0019015) #21	Cep120 (MGP_PahariEiJ_G0019014) #22	MGP_PahariEiJ_G0019013 #23	Ppic (MGP_PahariEiJ_G0019012) #24	Snx24 (MGP_PahariEiJ_G0019011) #25	Snx2 (MGP_PahariEiJ_G0019010) #26	Sncaip (MGP_PahariEiJ_G0019009) #27	Gykl1 (MGP_PahariEiJ_G0019008)	1700034E13Rik (MGP_PahariEiJ_G0019007) #28	Zfp474 (MGP_PahariEiJ_G0019006)	Lox (MGP_PahariEiJ_G0019005) #30	Srfbp1 (MGP_PahariEiJ_G0019004) #31	Ftmt (MGP_PahariEiJ_G0019003) #32	Prr16 (MGP_PahariEiJ_G0019002) #34	Pudp (MGP_PahariEiJ_G0019001)	Fam170a (MGP_PahariEiJ_G0019000) #36	Hsd17b4 (MGP_PahariEiJ_G0018999) #37
Rat	MODERN SPECIES	9	ENSRNOG00000065037	Ctxn3 (ENSRNOG00000022957) #10	AC105604.1 (ENSRNOG00000033015)	Prrc1 (ENSRNOG00000016433) #11	Megf10 (ENSRNOG00000013674) #12	LOC100174910 (ENSRNOG00000013738) #13	Marchf3 (ENSRNOG00000023013) #14	Lmnb1 (ENSRNOG00000013774) #15	Tex43 (ENSRNOG00000023034) #16	Phax (ENSRNOG00000014459) #17	Aldh7a1 (ENSRNOG00000014645) #18	Gramd2b (ENSRNOG00000015225) #19	Zfp608 (ENSRNOG00000023197) #20	LOC100362479 (ENSRNOG00000067741)	Csnk1g3 (ENSRNOG00000016677) #21	Cep120 (ENSRNOG00000017035) #22	Prdm6 (ENSRNOG00000030486) #23	Ppic (ENSRNOG00000017416) #24	Snx24 (ENSRNOG00000017488) #25	Snx2 (ENSRNOG00000017832) #26	Amt-ps1 (ENSRNOG00000066074)	ENSRNOG00000065460	Sncaip (ENSRNOG00000018254) #27	Gykl1 (ENSRNOG00000029096)	Zfp475 (ENSRNOG00000067527) #28	Zfp475 (ENSRNOG00000018724)	Lox (ENSRNOG00000014426) #30	Srfbp1 (ENSRNOG00000014808) #31	Ftmt (ENSRNOG00000014988) #32	AABR07032097.1 (ENSRNOG00000019744) #34	Pudp (ENSRNOG00000025422)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1041													ENSNGAG00000003663	Zfp608 (ENSNGAG00000005351) #20	Csnk1g3 (ENSNGAG00000009095) #21	Cep120 (ENSNGAG00000013770) #22	Prdm6 (ENSNGAG00000014634) #23	Ppic (ENSNGAG00000015449) #24	ENSNGAG00000016507 #25	Snx2 (ENSNGAG00000017517) #26
Lesser Egyptian jerboa	MODERN SPECIES	168				Megf10 (ENSJJAG00000014323) #12	C330018D20Rik (ENSJJAG00000015949) #13	Marchf3 (ENSJJAG00000016326) #14	Lmnb1 (ENSJJAG00000016492) #15	ENSJJAG00000016539	ENSJJAG00000016790	Tex43 (ENSJJAG00000016971) #16	ENSJJAG00000017266 #17	Aldh7a1 (ENSJJAG00000018282) #18	Gramd3 (ENSJJAG00000020204) #19	Zfp608 (ENSJJAG00000021213) #20	Csnk1g3 (ENSJJAG00000021692) #21	Cep120 (ENSJJAG00000022675) #22	Prdm6 (ENSJJAG00000000894) #23	Ppic (ENSJJAG00000001551) #24	Snx24 (ENSJJAG00000005328) #25	Snx2 (ENSJJAG00000009054) #26	Sncaip (ENSJJAG00000010838) #27	ENSJJAG00000012299	1700034E13Rik (ENSJJAG00000012621) #28	Lox (ENSJJAG00000012805) #30	Srfbp1 (ENSJJAG00000013229) #31	Fbxo25 (ENSJJAG00000014014)	ENSJJAG00000016621	ENSJJAG00000017534	Hes7 (ENSJJAG00000009906)	Aloxe3 (ENSJJAG00000011820)	Alox12b (ENSJJAG00000015753)
Kangaroo rat	MODERN SPECIES	346	Fbn2 (ENSDORG00000005003) #8	Slc12a2 (ENSDORG00000007298) #9	Ccdc192 (ENSDORG00000025240)	Ctxn3 (ENSDORG00000029508) #10	Prrc1 (ENSDORG00000015204) #11	Megf10 (ENSDORG00000015201) #12	C330018D20Rik (ENSDORG00000009280) #13	Marchf3 (ENSDORG00000006633) #14	Lmnb1 (ENSDORG00000006632) #15	Tex43 (ENSDORG00000027663) #16	Phax (ENSDORG00000028936) #17	Aldh7a1 (ENSDORG00000005733) #18	Gramd3 (ENSDORG00000005732) #19	Zfp608 (ENSDORG00000009366) #20	Csnk1g3 (ENSDORG00000010187) #21	Cep120 (ENSDORG00000015742) #22	Prdm6 (ENSDORG00000009966) #23	Ppic (ENSDORG00000015659) #24	Snx24 (ENSDORG00000015658) #25	Snx2 (ENSDORG00000015224) #26	Sncaip (ENSDORG00000014295) #27	ENSDORG00000026417	1700034E13Rik (ENSDORG00000025106) #28	Lox (ENSDORG00000025532) #30	Tbx19 (ENSDORG00000014860)	Dpt (ENSDORG00000002652)	Atp1b1 (ENSDORG00000015637)	Nme7 (ENSDORG00000015638)	Blzf1 (ENSDORG00000015639)	Slc19a2 (ENSDORG00000004902)	ENSDORG00000030142
Lagomorpha	ANCESTRAL SPECIES	3	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Rabbit	MODERN SPECIES	14	ENSOCUG00000031199	ENSOCUG00000023531	CTXN3 (ENSOCUG00000007596) #10	PRRC1 (ENSOCUG00000012160) #11	MEGF10 (ENSOCUG00000003724) #12	C5orf63 (ENSOCUG00000015863) #13	MARCHF3 (ENSOCUG00000007506) #14	LMNB1 (ENSOCUG00000007499) #15	TEX43 (ENSOCUG00000022846) #16	PHAX (ENSOCUG00000010197) #17	ALDH7A1 (ENSOCUG00000010185) #18	GRAMD2B (ENSOCUG00000016248) #19	ZNF608 (ENSOCUG00000017068) #20	ENSOCUG00000036237	CSNK1G3 (ENSOCUG00000014821) #21	CEP120 (ENSOCUG00000005564) #22	PRDM6 (ENSOCUG00000003454) #23	PPIC (ENSOCUG00000012053) #24	SNX24 (ENSOCUG00000012046) #25	ENSOCUG00000036633	SNX2 (ENSOCUG00000013435) #26	SNCAIP (ENSOCUG00000008627) #27	ENSOCUG00000003318 #28	LOX (ENSOCUG00000003313) #30	SRFBP1 (ENSOCUG00000009556) #31	FTMT (ENSOCUG00000021440) #32	ENSOCUG00000023850 #33	ENSOCUG00000022384 #33	ENSOCUG00000023996 #33	PRR16 (ENSOCUG00000006501) #34	ENSOCUG00000003977
Pika	MODERN SPECIES	3195															ENSOPRG00000007513 #21	CEP120 (ENSOPRG00000007489) #22
Tree shrew	MODERN SPECIES	3600																CEP120 (ENSTBEG00000010463) #22
Primates	ANCESTRAL SPECIES	8	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115	ENSGT00940000154319.v	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115	ENSGT00940000154319.v	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.f.a #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a	ENSGT00940000162220 #36	ENSGT00940000158343 #37
Hominidae	ANCESTRAL SPECIES	7	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.f.a #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a	ENSGT00940000162220 #36	ENSGT00940000158343 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.f.a #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000153339.a.b.b.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a	ENSGT00940000162220 #36
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.f.a #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000153339.a.b.b.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a	ENSGT00940000162220 #36
Pan	ANCESTRAL SPECIES	10	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.f.a #18	ENSGT00940000156980 #19	ENSGT00390000008732.a.a.b.q.b	ENSGT00910000147816	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000153339.a.b.b.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a	ENSGT00940000162220 #36
Bonobo	MODERN SPECIES	18	ENSPPAG00000034513	MEGF10 (ENSPPAG00000038100) #12	ENSPPAG00000015080	ENSPPAG00000043875 #13	MARCHF3 (ENSPPAG00000030628) #14	LMNB1 (ENSPPAG00000039374) #15	TEX43 (ENSPPAG00000041160) #16	PHAX (ENSPPAG00000013754) #17	ALDH7A1 (ENSPPAG00000036939) #18	GRAMD2B (ENSPPAG00000041531) #19	ENSPPAG00000032901	ENSPPAG00000018777	ZNF608 (ENSPPAG00000035692) #20	CSNK1G3 (ENSPPAG00000028193) #21	ENSPPAG00000031140	CEP120 (ENSPPAG00000032492) #22	ENSPPAG00000041868 #23	PPIC (ENSPPAG00000042661) #24	ENSPPAG00000040437 #25	SNX2 (ENSPPAG00000031636) #26	ENSPPAG00000029265	SNCAIP (ENSPPAG00000029373) #27	ENSPPAG00000028698 #28	ZNF474 (ENSPPAG00000024398)	LOX (ENSPPAG00000035643) #30	SRFBP1 (ENSPPAG00000035848) #31	FTMT (ENSPPAG00000022287) #32	PRR16 (ENSPPAG00000026111) #34	ENSPPAG00000028133	FAM170A (ENSPPAG00000035991) #36	HSD17B4 (ENSPPAG00000041825) #37
Chimpanzee	MODERN SPECIES	18	MEGF10 (ENSPTRG00000017193) #12	ENSPTRG00000048267	C5H5orf63 (ENSPTRG00000048256) #13	MARCHF3 (ENSPTRG00000017190) #14	LMNB1 (ENSPTRG00000017188) #15	ENSPTRG00000050022	TEX43 (ENSPTRG00000022761) #16	PHAX (ENSPTRG00000017186) #17	ALDH7A1 (ENSPTRG00000051135) #18	GRAMD2B (ENSPTRG00000017184) #19	ENSPTRG00000043676	ENSPTRG00000050689	ZNF608 (ENSPTRG00000017183) #20	CSNK1G3 (ENSPTRG00000017182) #21	ENSPTRG00000051393	CEP120 (ENSPTRG00000017181) #22	PRDM6 (ENSPTRG00000017180) #23	PPIC (ENSPTRG00000017179) #24	SNX24 (ENSPTRG00000048492) #25	SNX2 (ENSPTRG00000028644) #26	ENSPTRG00000049444	SNCAIP (ENSPTRG00000017175) #27	ENSPTRG00000052865 #28	LOX (ENSPTRG00000017173) #30	SRFBP1 (ENSPTRG00000017172) #31	FTMT (ENSPTRG00000017171) #32	PRR16 (ENSPTRG00000017170) #34	ENSPTRG00000047188	FAM170A (ENSPTRG00000017169) #36	HSD17B4 (ENSPTRG00000017168) #37	TNFAIP8 (ENSPTRG00000017167)
Human	MODERN SPECIES	17	FBN2 (ENSG00000138829) #8	SLC12A2 (ENSG00000064651) #9	CCDC192 (ENSG00000230561)	CTXN3 (ENSG00000205279) #10	PRRC1 (ENSG00000164244) #11	MEGF10 (ENSG00000145794) #12	C5orf63 (ENSG00000164241) #13	MARCHF3 (ENSG00000173926) #14	LMNB1 (ENSG00000113368) #15	TEX43 (ENSG00000196900) #16	PHAX (ENSG00000164902) #17	ALDH7A1 (ENSG00000164904) #18	GRAMD2B (ENSG00000155324) #19	ZNF608 (ENSG00000168916) #20	CSNK1G3 (ENSG00000151292) #21	CEP120 (ENSG00000168944) #22	PRDM6 (ENSG00000061455) #23	PPIC (ENSG00000168938) #24	SNX24 (ENSG00000064652) #25	SNX2 (ENSG00000205302) #26	SNCAIP (ENSG00000064692) #27	ENSG00000250803 #28	ZNF474 (ENSG00000164185)	LOX (ENSG00000113083) #30	SRFBP1 (ENSG00000151304) #31	FTMT (ENSG00000181867) #32	PRR16 (ENSG00000184838) #34	FAM170A (ENSG00000164334) #36	HSD17B4 (ENSG00000133835) #37	TNFAIP8 (ENSG00000145779)	DMXL1 (ENSG00000172869)
Gorilla	MODERN SPECIES	18	CTXN3 (ENSGGOG00000036661) #10	PRRC1 (ENSGGOG00000010195) #11	MEGF10 (ENSGGOG00000006505) #12	ENSGGOG00000022731	ENSGGOG00000006111 #13	MARCHF3 (ENSGGOG00000000905) #14	LMNB1 (ENSGGOG00000007999) #15	ENSGGOG00000010327	PHAX (ENSGGOG00000013877) #17	ENSGGOG00000040337 #18	GRAMD2B (ENSGGOG00000003435) #19	ENSGGOG00000037025	ZNF608 (ENSGGOG00000015745) #20	CSNK1G3 (ENSGGOG00000015968) #21	ENSGGOG00000022566	CEP120 (ENSGGOG00000008568) #22	PRDM6 (ENSGGOG00000036936) #23	PPIC (ENSGGOG00000001121) #24	SNX24 (ENSGGOG00000011673) #25	ENSGGOG00000002409 #26	ENSGGOG00000037533	SNCAIP (ENSGGOG00000015443) #27	ENSGGOG00000041793	ZNF474 (ENSGGOG00000008193)	LOX (ENSGGOG00000024751) #30	SRFBP1 (ENSGGOG00000007725) #31	FTMT (ENSGGOG00000001510) #32	PRR16 (ENSGGOG00000016737) #34	ENSGGOG00000027672	FAM170A (ENSGGOG00000009985) #36	HSD17B4 (ENSGGOG00000002010) #37
Orangutan	MODERN SPECIES	18	SLC12A2 (ENSPPYG00000015739) #9	CCDC192 (ENSPPYG00000039317)	CTXN3 (ENSPPYG00000015738) #10	PRRC1 (ENSPPYG00000015737) #11	MEGF10 (ENSPPYG00000015735) #12	ENSPPYG00000015732 #13	MARCHF3 (ENSPPYG00000035472) #14	LMNB1 (ENSPPYG00000015729) #15	TEX43 (ENSPPYG00000015728) #16	PHAX (ENSPPYG00000015726) #17	ENSPPYG00000025927 #18	GRAMD2B (ENSPPYG00000015725) #19	ZNF608 (ENSPPYG00000015724) #20	ENSPPYG00000041402	CSNK1G3 (ENSPPYG00000015723) #21	CEP120 (ENSPPYG00000015721) #22	PRDM6 (ENSPPYG00000034187) #23	PPIC (ENSPPYG00000041630) #24	SNX24 (ENSPPYG00000015719) #25	SNX2 (ENSPPYG00000015718) #26	SNCAIP (ENSPPYG00000015717) #27	ENSPPYG00000039614 #28	ZNF474 (ENSPPYG00000015716)	LOX (ENSPPYG00000015715) #30	SRFBP1 (ENSPPYG00000015714) #31	FTMT (ENSPPYG00000015713) #32	PRR16 (ENSPPYG00000015712) #34	FAM170A (ENSPPYG00000015711) #36	HSD17B4 (ENSPPYG00000015710) #37	TNFAIP8 (ENSPPYG00000015709)	DMXL1 (ENSPPYG00000015708)
Gibbon	MODERN SPECIES	11	CTXN3 (ENSNLEG00000036313) #10	PRRC1 (ENSNLEG00000012281) #11	ENSNLEG00000028579	MEGF10 (ENSNLEG00000012271) #12	ENSNLEG00000012269 #13	MARCHF3 (ENSNLEG00000012261) #14	LMNB1 (ENSNLEG00000012250) #15	TEX43 (ENSNLEG00000012247) #16	ENSNLEG00000030757	PHAX (ENSNLEG00000012242) #17	ALDH7A1 (ENSNLEG00000012180) #18	GRAMD2B (ENSNLEG00000012129) #19	ENSNLEG00000028602	ZNF608 (ENSNLEG00000012117) #20	CSNK1G3 (ENSNLEG00000012089) #21	CEP120 (ENSNLEG00000012069) #22	PRDM6 (ENSNLEG00000012064) #23	PPIC (ENSNLEG00000012061) #24	SNX24 (ENSNLEG00000012059) #25	ENSNLEG00000031106 #26	ENSNLEG00000029668	SNCAIP (ENSNLEG00000011998) #27	ENSNLEG00000011997 #28	LOX (ENSNLEG00000011966) #30	SRFBP1 (ENSNLEG00000011949) #31	ENSNLEG00000032909	FTMT (ENSNLEG00000018895) #32	ENSNLEG00000027706	ENSNLEG00000031918	PRR16 (ENSNLEG00000011947) #34	ENSNLEG00000034199
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00940000167145	ENSGT00390000006935 #16	ENSGT00390000011084.g #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115.f	ENSGT00940000154319.v	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a
Rhinopithecus	ANCESTRAL SPECIES	427															ENSGT00940000160646.e #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31
Golden snub-nosed monkey	MODERN SPECIES	1323															CSNK1G3 (ENSRROG00000036057) #21	CEP120 (ENSRROG00000030012) #22
Black snub-nosed monkey	MODERN SPECIES	2019														ENSRBIG00000009293	CSNK1G3 (ENSRBIG00000044549) #21	CEP120 (ENSRBIG00000005638) #22	PRDM6 (ENSRBIG00000043372) #23	PPIC (ENSRBIG00000041146) #24	SNX24 (ENSRBIG00000039131) #25	SNX2 (ENSRBIG00000028480) #26	ENSRBIG00000017677	SNCAIP (ENSRBIG00000033082) #27	ENSRBIG00000034381 #28	LOX (ENSRBIG00000043026) #30	SRFBP1 (ENSRBIG00000031064) #31
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00940000167145	ENSGT00390000006935 #16	ENSGT00390000011084.g #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115.f	ENSGT00940000154319.v	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000016262.j.a	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34
Vervet Monkey	MODERN SPECIES	15	FBN2 (ENSCSAG00000014330) #8	SLC12A2 (ENSCSAG00000014424) #9	CTXN3 (ENSCSAG00000000506) #10	PRRC1 (ENSCSAG00000014434) #11	MEGF10 (ENSCSAG00000014452) #12	C5orf63 (ENSCSAG00000014468) #13	MARCHF3 (ENSCSAG00000014474) #14	LMNB1 (ENSCSAG00000014483) #15	TEX43 (ENSCSAG00000014492) #16	PHAX (ENSCSAG00000014510) #17	ALDH7A1 (ENSCSAG00000014524) #18	GRAMD2B (ENSCSAG00000014535) #19	ZNF608 (ENSCSAG00000014544) #20	ENSCSAG00000000507	CSNK1G3 (ENSCSAG00000014555) #21	CEP120 (ENSCSAG00000014571) #22	PRDM6 (ENSCSAG00000014599) #23	PPIC (ENSCSAG00000014607) #24	ENSCSAG00000000508	SNX24 (ENSCSAG00000014613) #25	SNX2 (ENSCSAG00000014620) #26	SNCAIP (ENSCSAG00000014626) #27	ZNF474 (ENSCSAG00000000509)	LOX (ENSCSAG00000014633) #30	SRFBP1 (ENSCSAG00000014636) #31	FTMT (ENSCSAG00000000510) #32	PRR16 (ENSCSAG00000000511) #34	FAM170A (ENSCSAG00000014643) #36	HSD17B4 (ENSCSAG00000014659) #37	TNFAIP8 (ENSCSAG00000014662)	DMXL1 (ENSCSAG00000014679)
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00940000167145	ENSGT00390000006935 #16	ENSGT00390000011084.g #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115.f	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000016262.j.a	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a
Macaca	ANCESTRAL SPECIES	7	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084.g #17	ENSGT00940000154938.g.a #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115.f	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a	ENSGT00940000162220 #36	ENSGT00940000158343 #37
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084.g #17	ENSGT00940000154938.h #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000154319.v	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Rhesus	MODERN SPECIES	16	CCDC192 (ENSMMUG00000038541)	PRRC1 (ENSMMUG00000008202) #11	MEGF10 (ENSMMUG00000018827) #12	C6H5orf63 (ENSMMUG00000037806) #13	MARCHF3 (ENSMMUG00000021547) #14	LMNB1 (ENSMMUG00000000823) #15	TEX43 (ENSMMUG00000056480) #16	PHAX (ENSMMUG00000016683) #17	ALDH7A1 (ENSMMUG00000016682) #18	ENSMMUG00000046228	GRAMD2B (ENSMMUG00000007899) #19	ZNF608 (ENSMMUG00000004409) #20	ENSMMUG00000060057	ENSMMUG00000062842	CSNK1G3 (ENSMMUG00000006646) #21	CEP120 (ENSMMUG00000015767) #22	PRDM6 (ENSMMUG00000052656) #23	ENSMMUG00000060336	PPIC (ENSMMUG00000010651) #24	SNX2 (ENSMMUG00000023598) #26	SNCAIP (ENSMMUG00000009997) #27	ENSMMUG00000046428 #28	ZNF474 (ENSMMUG00000021006)	LOX (ENSMMUG00000056626) #30	SRFBP1 (ENSMMUG00000021009) #31	FTMT (ENSMMUG00000051455) #32	PRR16 (ENSMMUG00000038727) #34	ENSMMUG00000063354	ENSMMUG00000018764	ENSMMUG00000059145	HSD17B4 (ENSMMUG00000017685) #37
Crab-eating macaque	MODERN SPECIES	16	ENSMFAG00000063020	CCDC192 (ENSMFAG00000041916)	PRRC1 (ENSMFAG00000044127) #11	MEGF10 (ENSMFAG00000042999) #12	ENSMFAG00000009790 #13	MARCHF3 (ENSMFAG00000046331) #14	LMNB1 (ENSMFAG00000033746) #15	TEX43 (ENSMFAG00000042605) #16	PHAX (ENSMFAG00000049514) #17	ENSMFAG00000045191 #18	ENSMFAG00000055240	GRAMD2B (ENSMFAG00000044063) #19	ZNF608 (ENSMFAG00000043739) #20	ENSMFAG00000063425	CSNK1G3 (ENSMFAG00000031684) #21	CEP120 (ENSMFAG00000000165) #22	ENSMFAG00000037648	PRDM6 (ENSMFAG00000002537) #23	PPIC (ENSMFAG00000033147) #24	SNX2 (ENSMFAG00000029999) #26	SNCAIP (ENSMFAG00000033060) #27	ENSMFAG00000061686 #28	ZNF474 (ENSMFAG00000056098)	LOX (ENSMFAG00000054298) #30	SRFBP1 (ENSMFAG00000031263) #31	PRR16 (ENSMFAG00000003359) #34	ENSMFAG00000002111	HSD17B4 (ENSMFAG00000039507) #37	TNFAIP8 (ENSMFAG00000042688)	DMXL1 (ENSMFAG00000040275)	ENSMFAG00000043561
Pig-tailed macaque	MODERN SPECIES	295					ENSMNEG00000042326	ENSMNEG00000029316	ENSMNEG00000043529 #13	MARCHF3 (ENSMNEG00000033483) #14	LMNB1 (ENSMNEG00000034728) #15	ENSMNEG00000037182	ENSMNEG00000045186 #17	ENSMNEG00000027216 #18	GRAMD2B (ENSMNEG00000043427) #19	ZNF608 (ENSMNEG00000033840) #20	CSNK1G3 (ENSMNEG00000032668) #21	CEP120 (ENSMNEG00000035699) #22	ENSMNEG00000036700	PRDM6 (ENSMNEG00000036672) #23	PPIC (ENSMNEG00000043595) #24	ENSMNEG00000041517	SNX24 (ENSMNEG00000039496) #25	SNX2 (ENSMNEG00000042443) #26	SNCAIP (ENSMNEG00000037014) #27	ENSMNEG00000039560 #28	LOX (ENSMNEG00000042212) #30	SRFBP1 (ENSMNEG00000040870) #31	PRR16 (ENSMNEG00000042635) #34	ENSMNEG00000043573	ENSMNEG00000043297	FAM170A (ENSMNEG00000038508) #36	HSD17B4 (ENSMNEG00000034446) #37
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00940000167145	ENSGT00390000006935 #16	ENSGT00390000011084.g #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115.f	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000016262.j.a	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000000603.a
Olive baboon	MODERN SPECIES	15	CTXN3 (ENSPANG00000003662) #10	PRRC1 (ENSPANG00000003082) #11	MEGF10 (ENSPANG00000006534) #12	MARCHF3 (ENSPANG00000006160) #14	ENSPANG00000031348 #13	LMNB1 (ENSPANG00000011682) #15	ENSPANG00000033076	TEX43 (ENSPANG00000022176) #16	PHAX (ENSPANG00000010164) #17	ALDH7A1 (ENSPANG00000012208) #18	GRAMD2B (ENSPANG00000004678) #19	ENSPANG00000045932	ZNF608 (ENSPANG00000011668) #20	ENSPANG00000042763	CSNK1G3 (ENSPANG00000010942) #21	CEP120 (ENSPANG00000008620) #22	ENSPANG00000045596	PRDM6 (ENSPANG00000020936) #23	PPIC (ENSPANG00000024146) #24	SNX24 (ENSPANG00000007041) #25	SNX2 (ENSPANG00000011931) #26	ENSPANG00000047652	SNCAIP (ENSPANG00000003083) #27	ENSPANG00000031039 #28	ZNF474 (ENSPANG00000048097)	LOX (ENSPANG00000043820) #30	SRFBP1 (ENSPANG00000003799) #31	FTMT (ENSPANG00000042351) #32	PRR16 (ENSPANG00000030898) #34	ENSPANG00000042421	FAM170A (ENSPANG00000008126) #36
Cercopithecinae_d	ANCESTRAL SPECIES	18	ENSGT00390000003837 #11	ENSGT00940000153434.a.b.a.a	ENSGT00940000157703 #12	ENSGT00390000001878.h	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000018078.n.b	ENSGT00390000006935 #16	ENSGT00390000011084.g #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01030000235945	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115.f	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000016262.j.a	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00730000111572.a.b	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34
Drill	MODERN SPECIES	962												ENSMLEG00000027303	ZNF608 (ENSMLEG00000008940) #20	ENSMLEG00000001064	CSNK1G3 (ENSMLEG00000042930) #21	CEP120 (ENSMLEG00000041090) #22	ENSMLEG00000032179	PRDM6 (ENSMLEG00000038857) #23	PPIC (ENSMLEG00000033596) #24	SNX24 (ENSMLEG00000009535) #25	SNX2 (ENSMLEG00000020946) #26	ENSMLEG00000031035	SNCAIP (ENSMLEG00000031005) #27	ENSMLEG00000041857 #28	LOX (ENSMLEG00000033676) #30	SRFBP1 (ENSMLEG00000038679) #31	FTMT (ENSMLEG00000028728) #32
Sooty mangabey	MODERN SPECIES	309	CTXN3 (ENSCATG00000018324) #10	PRRC1 (ENSCATG00000031589) #11	MEGF10 (ENSCATG00000045270) #12	ENSCATG00000033679 #13	MARCHF3 (ENSCATG00000015290) #14	LMNB1 (ENSCATG00000034925) #15	ENSCATG00000045028	TEX43 (ENSCATG00000044525) #16	ENSCATG00000002341	ENSCATG00000019943 #17	ALDH7A1 (ENSCATG00000035683) #18	GRAMD2B (ENSCATG00000041939) #19	ENSCATG00000033483	ZNF608 (ENSCATG00000031619) #20	CSNK1G3 (ENSCATG00000036946) #21	CEP120 (ENSCATG00000029280) #22	ENSCATG00000035899	PRDM6 (ENSCATG00000031588) #23	PPIC (ENSCATG00000030659) #24	ENSCATG00000030459	SNX24 (ENSCATG00000041438) #25	SNX2 (ENSCATG00000012651) #26	SNCAIP (ENSCATG00000031538) #27	ENSCATG00000041760 #28	LOX (ENSCATG00000041361) #30	SRFBP1 (ENSCATG00000040904) #31	PRR16 (ENSCATG00000045055) #34	ENSCATG00000043895
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.k.a #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115	ENSGT00940000154319.v.t	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478.e #31	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Cebidae	ANCESTRAL SPECIES	6	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.k.a #18	ENSGT00940000156980 #19	ENSGT01020000230401.a.a.a.i.a.a.k.a	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT01090000260115	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478.e #31	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.k.a #18	ENSGT00940000156980 #19	ENSGT01020000230401.a.a.a.i.a.a.k.a	ENSGT00390000008748.a #20	ENSGT00940000157258.m.b	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478.e #31	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Bolivian squirrel monkey	MODERN SPECIES	43	MEGF10 (ENSSBOG00000019175) #12	ENSSBOG00000030929	ENSSBOG00000035116	C5orf63 (ENSSBOG00000000968) #13	MARCHF3 (ENSSBOG00000023895) #14	LMNB1 (ENSSBOG00000026468) #15	TEX43 (ENSSBOG00000023843) #16	PHAX (ENSSBOG00000019981) #17	ENSSBOG00000032179 #18	GRAMD2B (ENSSBOG00000034731) #19	ENSSBOG00000024091	ZNF608 (ENSSBOG00000023375) #20	ENSSBOG00000022267	ENSSBOG00000027659	CSNK1G3 (ENSSBOG00000033420) #21	CEP120 (ENSSBOG00000032810) #22	PRDM6 (ENSSBOG00000036108) #23	ENSSBOG00000032176	PPIC (ENSSBOG00000035731) #24	SNX24 (ENSSBOG00000027967) #25	SNX2 (ENSSBOG00000023789) #26	ENSSBOG00000032671	SNCAIP (ENSSBOG00000030798) #27	ENSSBOG00000033668 #28	ZNF474 (ENSSBOG00000021556)	LOX (ENSSBOG00000025774) #30	ENSSBOG00000015464 #31	PRR16 (ENSSBOG00000031473) #34	FAM170A (ENSSBOG00000025629) #36	HSD17B4 (ENSSBOG00000023708) #37	TNFAIP8 (ENSSBOG00000022853)
Capuchin	MODERN SPECIES	738														CSNK1G3 (ENSCCAG00000035487) #21	METAP2 (ENSCCAG00000030483)	CEP120 (ENSCCAG00000033353) #22
Marmoset	MODERN SPECIES	11	LMNB1 (ENSCJAG00000019144) #15	ENSCJAG00000085687	TEX43 (ENSCJAG00000011071) #16	ENSCJAG00000082285	PHAX (ENSCJAG00000055757) #17	ENSCJAG00000011102 #18	ENSCJAG00000069820	ENSCJAG00000008280 #19	ENSCJAG00000073070 #18	ENSCJAG00000085599 #19	ENSCJAG00000022376	ENSCJAG00000068510	ENSCJAG00000056580	ZNF608 (ENSCJAG00000008225) #20	CSNK1G3 (ENSCJAG00000017348) #21	CEP120 (ENSCJAG00000017322) #22	ENSCJAG00000074435	PRDM6 (ENSCJAG00000017318) #23	PPIC (ENSCJAG00000065144) #24	SNX2 (ENSCJAG00000017239) #26	ENSCJAG00000076221	ENSCJAG00000039670	SNCAIP (ENSCJAG00000017196) #27	ENSCJAG00000081497 #28	LOX (ENSCJAG00000043472) #30	SRFBP1 (ENSCJAG00000017177) #31	ENSCJAG00000077985	FTMT (ENSCJAG00000074582) #32	ENSCJAG00000071302	PRR16 (ENSCJAG00000017168) #34	ENSCJAG00000057228
Mas night monkey	MODERN SPECIES	966	ENSANAG00000037891 #13	MARCHF3 (ENSANAG00000021896) #14	LMNB1 (ENSANAG00000006147) #15	ENSANAG00000017917	ENSANAG00000018071	TEX43 (ENSANAG00000020432) #16	ENSANAG00000022879 #17	ENSANAG00000024922 #18	ENSANAG00000026615	GRAMD2B (ENSANAG00000025780) #19	ENSANAG00000021766	ENSANAG00000021414	ZNF608 (ENSANAG00000026653) #20	ENSANAG00000022607	CSNK1G3 (ENSANAG00000024113) #21	CEP120 (ENSANAG00000027276) #22	ENSANAG00000021690	PRDM6 (ENSANAG00000025903) #23	PPIC (ENSANAG00000022145) #24	SNX24 (ENSANAG00000023745) #25	SNX2 (ENSANAG00000023132) #26	ENSANAG00000026792	SNCAIP (ENSANAG00000023615) #27	ENSANAG00000026917 #28	LOX (ENSANAG00000022215) #30	SRFBP1 (ENSANAG00000022485) #31	PRR16 (ENSANAG00000022482) #34	ENSANAG00000022201	FAM170A (ENSANAG00000022413) #36	HSD17B4 (ENSANAG00000026074) #37	TNFAIP8 (ENSANAG00000023898)
Tarsier	MODERN SPECIES	2803																CEP120 (ENSTSYG00000000927) #22
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Lemuriformes	ANCESTRAL SPECIES	54	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Mouse lemur	MODERN SPECIES	3															ENSMICG00000014016 #21	CEP120 (ENSMICG00000047467) #22	PRDM6 (ENSMICG00000046260) #23	PPIC (ENSMICG00000001712) #24	SNX24 (ENSMICG00000044497) #25	SNX2 (ENSMICG00000001700) #26	SNCAIP (ENSMICG00000016502) #27	ENSMICG00000000238 #28	LOX (ENSMICG00000044306) #30	SRFBP1 (ENSMICG00000042923) #31	PRR16 (ENSMICG00000044812) #34	FAM170A (ENSMICG00000017038) #36	HSD17B4 (ENSMICG00000017025) #37	TNFAIP8 (ENSMICG00000042871)	DMXL1 (ENSMICG00000015937)	ENSMICG00000045935	ENSMICG00000042755
Lemuriformes_a	ANCESTRAL SPECIES	84	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Coquerels sifaka	MODERN SPECIES	989	ECRG4 (ENSPCOG00000014746)	NCK2 (ENSPCOG00000008931)	FHL2 (ENSPCOG00000023972)	C2orf49 (ENSPCOG00000019511)	TGFBRAP1 (ENSPCOG00000015488)	MRPS9 (ENSPCOG00000018743)	C5orf63 (ENSPCOG00000019707) #13	MARCHF3 (ENSPCOG00000026764) #14	LMNB1 (ENSPCOG00000015630) #15	TEX43 (ENSPCOG00000014490) #16	PHAX (ENSPCOG00000015714) #17	ALDH7A1 (ENSPCOG00000013532) #18	GRAMD2B (ENSPCOG00000008870) #19	ZNF608 (ENSPCOG00000018200) #20	CSNK1G3 (ENSPCOG00000022062) #21	CEP120 (ENSPCOG00000023766) #22	PRDM6 (ENSPCOG00000016453) #23	PPIC (ENSPCOG00000018909) #24	SNX24 (ENSPCOG00000015393) #25	SNX2 (ENSPCOG00000022160) #26	SNCAIP (ENSPCOG00000017712) #27	ENSPCOG00000024311 #28	ENSPCOG00000006366 #29	LOX (ENSPCOG00000021250) #30	SRFBP1 (ENSPCOG00000027331) #31
Greater bamboo lemur	MODERN SPECIES	712													ENSPSMG00000012515	ZNF608 (ENSPSMG00000012504) #20	CSNK1G3 (ENSPSMG00000012466) #21	CEP120 (ENSPSMG00000012366) #22	PRDM6 (ENSPSMG00000012302) #23	PPIC (ENSPSMG00000012295) #24	SNX24 (ENSPSMG00000012284) #25	SNX2 (ENSPSMG00000012259) #26
Bushbaby	MODERN SPECIES	275											ENSOGAG00000004562 #17	ALDH7A1 (ENSOGAG00000002475) #18	ZNF608 (ENSOGAG00000002389) #20	ENSOGAG00000034390	ENSOGAG00000011587 #21	CEP120 (ENSOGAG00000000278) #22	PPIC (ENSOGAG00000028930) #24	SNX24 (ENSOGAG00000005170) #25	SNX2 (ENSOGAG00000016473) #26	SNCAIP (ENSOGAG00000006904) #27	ENSOGAG00000029375 #28	LOX (ENSOGAG00000027586) #30	SRFBP1 (ENSOGAG00000032423) #31	FTMT (ENSOGAG00000006899) #32
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Suina	ANCESTRAL SPECIES	11	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37
Chacoan peccary	MODERN SPECIES	204	FBN2 (ENSCWAG00000002872) #8	SLC12A2 (ENSCWAG00000002750) #9	CCDC192 (ENSCWAG00000002712)	CTXN3 (ENSCWAG00000002703) #10	PRRC1 (ENSCWAG00000002691) #11	MEGF10 (ENSCWAG00000002652) #12	C5orf63 (ENSCWAG00000002640) #13	MARCHF3 (ENSCWAG00000002637) #14	LMNB1 (ENSCWAG00000002624) #15	TEX43 (ENSCWAG00000002616) #16	PHAX (ENSCWAG00000002605) #17	ALDH7A1 (ENSCWAG00000002560) #18	GRAMD2B (ENSCWAG00000002485) #19	ZNF608 (ENSCWAG00000002430) #20	CSNK1G3 (ENSCWAG00000002362) #21	CEP120 (ENSCWAG00000002325) #22	PRDM6 (ENSCWAG00000002308) #23	PPIC (ENSCWAG00000002296) #24	SNX24 (ENSCWAG00000002285) #25	SNX2 (ENSCWAG00000002253) #26	SNCAIP (ENSCWAG00000002071) #27	ENSCWAG00000002040 #28	ENSCWAG00000002029 #29	LOX (ENSCWAG00000002021) #30	SRFBP1 (ENSCWAG00000002002) #31	FTMT (ENSCWAG00000001994) #32	ENSCWAG00000001983 #33	PRR16 (ENSCWAG00000001973) #34	ENSCWAG00000001965	FAM170A (ENSCWAG00000001952) #36	HSD17B4 (ENSCWAG00000001921) #37
Pig	MODERN SPECIES	10	CTXN3 (ENSSSCG00000036570) #10	PRRC1 (ENSSSCG00000014252) #11	MEGF10 (ENSSSCG00000032877) #12	C5orf63 (ENSSSCG00000014250) #13	ENSSSCG00000050715	MARCHF3 (ENSSSCG00000014249) #14	LMNB1 (ENSSSCG00000014248) #15	TEX43 (ENSSSCG00000040454) #16	PHAX (ENSSSCG00000014244) #17	ALDH7A1 (ENSSSCG00000014247) #18	ENSSSCG00000061074	GRAMD2B (ENSSSCG00000022402) #19	ENSSSCG00000014242 #20	CSNK1G3 (ENSSSCG00000014240) #21	ENSSSCG00000045263	CEP120 (ENSSSCG00000014239) #22	PRDM6 (ENSSSCG00000014238) #23	PPIC (ENSSSCG00000031128) #24	SNX24 (ENSSSCG00000039373) #25	SNX2 (ENSSSCG00000022790) #26	ENSSSCG00000014235	ENSSSCG00000014233 #28	LOX (ENSSSCG00000014232) #30	SRFBP1 (ENSSSCG00000022656) #31	FTMT (ENSSSCG00000014231) #32	ENSSSCG00000041876 #33	PRR16 (ENSSSCG00000039760) #34	ENSSSCG00000052759	FAM170A (ENSSSCG00000014228) #36	ENSSSCG00000046515	HSD17B4 (ENSSSCG00000028431) #37
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Cetacea	ANCESTRAL SPECIES	1	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000155210.a.b.v	ENSGT00940000155118.o	ENSGT00940000155067.a	ENSGT00940000162220 #36
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000168043.a	ENSGT00910000144204.a #34	ENSGT00940000155210.a.b.v	ENSGT00940000155118.o.a.a	ENSGT00940000162220 #36
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000168043.a	ENSGT00910000144204.a #34	ENSGT00940000155210.a.b.v	ENSGT00940000155118.o.a.a	ENSGT00940000162220 #36
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000168043.a	ENSGT00910000144204.a #34	ENSGT00940000155210.a.b.v	ENSGT00940000155118.o.a.a	ENSGT00940000162220 #36
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01010000229395	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000010423	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000168043.a	ENSGT00910000144204.a #34	ENSGT00940000155210.a.b.v	ENSGT00940000155118.o.a.a
Narwhal	MODERN SPECIES	298	CTXN3 (ENSMMNG00015003050) #10	PRRC1 (ENSMMNG00015003018) #11	MEGF10 (ENSMMNG00015002957) #12	C5orf63 (ENSMMNG00015002919) #13	MARCHF3 (ENSMMNG00015002904) #14	LMNB1 (ENSMMNG00015002879) #15	TEX43 (ENSMMNG00015002863) #16	PHAX (ENSMMNG00015002845) #17	ENSMMNG00015002838	ALDH7A1 (ENSMMNG00015002788) #18	GRAMD2B (ENSMMNG00015002725) #19	ENSMMNG00015002684	ZNF608 (ENSMMNG00015002658) #20	ENSMMNG00015002643	CSNK1G3 (ENSMMNG00015002598) #21	CEP120 (ENSMMNG00015002509) #22	PRDM6 (ENSMMNG00015002473) #23	PPIC (ENSMMNG00015002437) #24	ENSMMNG00015002420	SNX24 (ENSMMNG00015002405) #25	SNX2 (ENSMMNG00015002357) #26	SNCAIP (ENSMMNG00015002285) #27	ENSMMNG00015002236 #28	ENSMMNG00015002209 #29	LOX (ENSMMNG00015002189) #30	SRFBP1 (ENSMMNG00015002167) #31	FTMT (ENSMMNG00015002152) #32	ENSMMNG00015002139	PRR16 (ENSMMNG00015002119) #34	ENSMMNG00015002101	ENSMMNG00015002089
Beluga whale	MODERN SPECIES	34	SLC12A2 (ENSDLEG00000001487) #9	CTXN3 (ENSDLEG00000001461) #10	PRRC1 (ENSDLEG00000001446) #11	MEGF10 (ENSDLEG00000001392) #12	C5orf63 (ENSDLEG00000001377) #13	MARCHF3 (ENSDLEG00000001373) #14	LMNB1 (ENSDLEG00000001365) #15	TEX43 (ENSDLEG00000001350) #16	PHAX (ENSDLEG00000001334) #17	ENSDLEG00000001317	ALDH7A1 (ENSDLEG00000001292) #18	GRAMD2B (ENSDLEG00000001243) #19	ENSDLEG00000001219	ZNF608 (ENSDLEG00000001189) #20	CSNK1G3 (ENSDLEG00000001111) #21	CEP120 (ENSDLEG00000001039) #22	PRDM6 (ENSDLEG00000000998) #23	PPIC (ENSDLEG00000000984) #24	ENSDLEG00000000979	SNX24 (ENSDLEG00000000928) #26	SNCAIP (ENSDLEG00000000831) #27	ENSDLEG00000000794 #28	ENSDLEG00000000779 #29	LOX (ENSDLEG00000000763) #30	SRFBP1 (ENSDLEG00000000750) #31	FTMT (ENSDLEG00000000741) #32	ENSDLEG00000000733	PRR16 (ENSDLEG00000000718) #34	ENSDLEG00000000709	ENSDLEG00000000704	ENSDLEG00000000697
Vaquita	MODERN SPECIES	14	CCDC192 (ENSPSNG00000002777)	ENSPSNG00000002796	CTXN3 (ENSPSNG00000002807) #10	PRRC1 (ENSPSNG00000002837) #11	MEGF10 (ENSPSNG00000002874) #12	C5orf63 (ENSPSNG00000002911) #13	MARCHF3 (ENSPSNG00000002931) #14	LMNB1 (ENSPSNG00000002954) #15	TEX43 (ENSPSNG00000002968) #16	PHAX (ENSPSNG00000002980) #17	ENSPSNG00000002992	ALDH7A1 (ENSPSNG00000003009) #18	GRAMD2B (ENSPSNG00000003061) #19	ZNF608 (ENSPSNG00000003121) #20	CSNK1G3 (ENSPSNG00000003171) #21	CEP120 (ENSPSNG00000003259) #22	PRDM6 (ENSPSNG00000003380) #23	PPIC (ENSPSNG00000003396) #24	SNX24 (ENSPSNG00000003412) #25	SNX2 (ENSPSNG00000003442) #26	SNCAIP (ENSPSNG00000003486) #27	ENSPSNG00000003567 #28	ENSPSNG00000003575 #29	LOX (ENSPSNG00000003588) #30	SRFBP1 (ENSPSNG00000003607) #31	FTMT (ENSPSNG00000003615) #32	ENSPSNG00000003622	PRR16 (ENSPSNG00000003649) #34	ENSPSNG00000003662	ENSPSNG00000003671	FAM170A (ENSPSNG00000003684) #36
Dolphin	MODERN SPECIES	6856																CEP120 (ENSTTRG00000012743) #22
Sperm whale	MODERN SPECIES	19	SLC12A2 (ENSPCTG00005002734) #9	CCDC192 (ENSPCTG00005002711)	CTXN3 (ENSPCTG00005002697) #10	PRRC1 (ENSPCTG00005002671) #11	MEGF10 (ENSPCTG00005002609) #12	C8H5orf63 (ENSPCTG00005002582) #13	MARCH3 (ENSPCTG00005002568) #14	LMNB1 (ENSPCTG00005002549) #15	TEX43 (ENSPCTG00005002533) #16	PHAX (ENSPCTG00005002524) #17	ALDH7A1 (ENSPCTG00005002377) #18	GRAMD2B (ENSPCTG00005002243) #19	ENSPCTG00005002207	ZNF608 (ENSPCTG00005002176) #20	CSNK1G3 (ENSPCTG00005002111) #21	CEP120 (ENSPCTG00005002011) #22	PRDM6 (ENSPCTG00005001984) #23	PPIC (ENSPCTG00005001957) #24	SNX24 (ENSPCTG00005001924) #25	SNX2 (ENSPCTG00005001899) #26	SNCAIP (ENSPCTG00005001832) #27	ENSPCTG00005001807 #28	ENSPCTG00005001795 #29	LOX (ENSPCTG00005001770) #30	SRFBP1 (ENSPCTG00005001750) #31	FTMT (ENSPCTG00005001737) #32	ENSPCTG00005001726	PRR16 (ENSPCTG00005001711) #34	ENSPCTG00005001702	ENSPCTG00005001696	ENSPCTG00005001691
Blue whale	MODERN SPECIES	14	SLC12A2 (ENSBMSG00010014581) #9	CCDC192 (ENSBMSG00010014492)	CTXN3 (ENSBMSG00010014463) #10	PRRC1 (ENSBMSG00010014415) #11	MEGF10 (ENSBMSG00010014241) #12	C5orf63 (ENSBMSG00010014202) #13	MARCHF3 (ENSBMSG00010014171) #14	LMNB1 (ENSBMSG00010014134) #15	TEX43 (ENSBMSG00010014103) #16	ENSBMSG00010014077 #17	ENSBMSG00010013972 #18	GRAMD2B (ENSBMSG00010013850) #19	ENSBMSG00010013785	ZNF608 (ENSBMSG00010013767) #20	CSNK1G3 (ENSBMSG00010013652) #21	CEP120 (ENSBMSG00010013600) #22	PRDM6 (ENSBMSG00010013580) #23	PPIC (ENSBMSG00010013569) #24	SNX24 (ENSBMSG00010013560) #25	SNX2 (ENSBMSG00010013528) #26	SNCAIP (ENSBMSG00010013437) #27	ENSBMSG00010013387 #28	ENSBMSG00010013378	LOX (ENSBMSG00010013366) #30	SRFBP1 (ENSBMSG00010013357) #31	FTMT (ENSBMSG00010013345) #32	PRR16 (ENSBMSG00010013320) #34	ENSBMSG00010013310	ENSBMSG00010013304	ENSBMSG00010013295	FAM170A (ENSBMSG00010013274) #36
Pecora	ANCESTRAL SPECIES		ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Yarkand deer	MODERN SPECIES	32	CCDC192 (ENSCHYG00000004209)	CTXN3 (ENSCHYG00000004237) #10	PRRC1 (ENSCHYG00000004256) #11	MEGF10 (ENSCHYG00000004302) #12	C5orf63 (ENSCHYG00000004362) #13	MARCHF3 (ENSCHYG00000004381) #14	LMNB1 (ENSCHYG00000004401) #15	TEX43 (ENSCHYG00000004452) #16	PHAX (ENSCHYG00000004458) #17	ALDH7A1 (ENSCHYG00000004506) #18	GRAMD2B (ENSCHYG00000004634) #19	ENSCHYG00000004694	ZNF608 (ENSCHYG00000004717) #20	ENSCHYG00000004745	CSNK1G3 (ENSCHYG00000004795) #21	CEP120 (ENSCHYG00000004910) #22	PRDM6 (ENSCHYG00000005012) #23	PPIC (ENSCHYG00000005034) #24	SNX24 (ENSCHYG00000005056) #25	SNX2 (ENSCHYG00000005112) #26	SNCAIP (ENSCHYG00000005329) #27	ENSCHYG00000005670 #28	LOX (ENSCHYG00000005705) #30	SRFBP1 (ENSCHYG00000005772) #31	FTMT (ENSCHYG00000005816) #32	PRR16 (ENSCHYG00000000399) #34	FAM170A (ENSCHYG00000000416) #36	HSD17B4 (ENSCHYG00000000468) #37	TNFAIP8 (ENSCHYG00000000581)	DMXL1 (ENSCHYG00000000630)	DTWD2 (ENSCHYG00000000678)
Percora_a	ANCESTRAL SPECIES		ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a.b #29	ENSGT00940000177613	ENSGT00530000064208.b.c.a #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000001440.a.b	ENSGT00940000162220 #36
Bovidae	ANCESTRAL SPECIES		ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000153288.a.b.a.a	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00510000047104.pb.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.b.c.a #28	ENSGT00530000064208.a.b #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000001440.a.b	ENSGT00940000162220 #36
Bovinae	ANCESTRAL SPECIES	2	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000153288.a.b.a.a	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000009693.c.a.b	ENSGT00390000008748.a #20	ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.b	ENSGT00940000160646 #21	ENSGT00510000047104.pb.a.a	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.c.a #28	ENSGT00530000064208.a.b #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00950000182810.A.a.a.p	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00950000185250.b	ENSGT00940000162220 #36
Bos	ANCESTRAL SPECIES	3	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000153288.a.b.a.a	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01100000263481.n.a.a.b.b.b.a.a.a.b.b.b	ENSGT00390000009693.c.a.b	ENSGT00390000008748.a #20	ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.b	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00510000047104.pb.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.b.b.b.b.a.b.a.a.a.b.b.b.b	ENSGT00530000064208.b.c.a #28	ENSGT00530000064208.a.b #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00950000182810.A.a.a.p	ENSGT00940000163833 #33	ENSGT00910000144204.a #34
Bos_a	ANCESTRAL SPECIES	2	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000153288.a.b.a.a	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT01100000263481.n.a.a.b.b.b.a.a.a.b.b.b	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00510000047104.pb.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.b.b.b.b.a.b.a.a.a.b.b.b.b	ENSGT00530000064208.b.c.a #28	ENSGT00530000064208.a.b #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00550000074828.a.h	ENSGT00940000163833 #33	ENSGT00910000144204.a #34
Domestic yak	MODERN SPECIES	27	MEGF10 (ENSBGRG00000008508) #12	ENSBGRG00000008837	C5orf63 (ENSBGRG00000008873) #13	ENSBGRG00000008935	MARCHF3 (ENSBGRG00000008967) #14	LMNB1 (ENSBGRG00000009066) #15	TEX43 (ENSBGRG00000008384) #16	PHAX (ENSBGRG00000008418) #17	ENSBGRG00000008464	ALDH7A1 (ENSBGRG00000008505) #18	GRAMD2B (ENSBGRG00000008902) #19	ENSBGRG00000009340	ZNF608 (ENSBGRG00000009381) #20	ENSBGRG00000009434	CSNK1G3 (ENSBGRG00000009467) #21	CEP120 (ENSBGRG00000009795) #22	ENSBGRG00000009972	PRDM6 (ENSBGRG00000009981) #23	PPIC (ENSBGRG00000010077) #24	SNX24 (ENSBGRG00000010168) #25	SNX2 (ENSBGRG00000010320) #26	ENSBGRG00000010785	SNCAIP (ENSBGRG00000010838) #27	ENSBGRG00000011485	ENSBGRG00000011514 #28	ENSBGRG00000011614 #29	LOX (ENSBGRG00000011693) #30	SRFBP1 (ENSBGRG00000011801) #31	FTMT (ENSBGRG00000011952) #32	ENSBGRG00000011975	ENSBGRG00000012000
Wild yak	MODERN SPECIES	2079																CEP120 (ENSBMUG00000003323) #22	ENSBMUG00000003385
Bos_b	ANCESTRAL SPECIES	2	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000153288.a.b.a.a	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000009693.c.a.b	ENSGT00390000008748.a #20	ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.b.b	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00510000047104.pb.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.b.b.b.b.a.b.a.a.a.b.b.b.b	ENSGT00530000064208.b.c.a #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00950000182810.A.a.a.p	ENSGT00910000144204.a #34	ENSGT00950000185250.b	ENSGT00940000162220 #36
Cow	MODERN SPECIES	26	CCDC192 (ENSBTAG00000052380)	CTXN3 (ENSBTAG00000031135) #10	PRRC1 (ENSBTAG00000021977) #11	MEGF10 (ENSBTAG00000000329) #12	C7H5orf63 (ENSBTAG00000017835) #13	ENSBTAG00000051246	MARCHF3 (ENSBTAG00000006797) #14	LMNB1 (ENSBTAG00000002882) #15	TEX43 (ENSBTAG00000046718) #16	PHAX (ENSBTAG00000009647) #17	ALDH7A1 (ENSBTAG00000009646) #18	GRAMD2B (ENSBTAG00000014974) #19	ENSBTAG00000046696	ZNF608 (ENSBTAG00000016137) #20	CSNK1G3 (ENSBTAG00000017550) #21	CEP120 (ENSBTAG00000013184) #22	ENSBTAG00000048849	PRDM6 (ENSBTAG00000020578) #23	PPIC (ENSBTAG00000001568) #24	SNX24 (ENSBTAG00000031069) #25	SELENOW (ENSBTAG00000049671)	SNX2 (ENSBTAG00000025358) #26	SNCAIP (ENSBTAG00000021971) #27	ENSBTAG00000019881 #28	LOX (ENSBTAG00000012994) #30	SRFBP1 (ENSBTAG00000014320) #31	FTMT (ENSBTAG00000005779) #32	ENSBTAG00000054810	ENSBTAG00000003086	ENSBTAG00000054377	PRR16 (ENSBTAG00000050473) #34
Hybrid Bos Indicus	MODERN SPECIES	26	ENSBIXG00005020236	MARCHF3 (ENSBIXG00005020248) #14	LMNB1 (ENSBIXG00005020270) #15	TEX43 (ENSBIXG00005020279) #16	ENSBIXG00005020292	PHAX (ENSBIXG00005020305) #17	ALDH7A1 (ENSBIXG00005020419) #18	ENSBIXG00005020428	GRAMD2B (ENSBIXG00005020617) #19	ENSBIXG00005020655	ENSBIXG00005020686	ZNF608 (ENSBIXG00005020763) #20	ENSBIXG00005020820	CSNK1G3 (ENSBIXG00005020916) #21	ENSBIXG00005020954	CEP120 (ENSBIXG00005003563) #22	PRDM6 (ENSBIXG00005021169) #23	PPIC (ENSBIXG00005021210) #24	SNX2 (ENSBIXG00005021360) #26	SNCAIP (ENSBIXG00005000013) #27	ENSBIXG00005007161	ENSBIXG00005021623 #28	LOX (ENSBIXG00005021644) #30	SRFBP1 (ENSBIXG00005021661) #31	FTMT (ENSBIXG00005021697) #32	ENSBIXG00005021719	PRR16 (ENSBIXG00005021746) #34	ENSBIXG00005003670	FAM170A (ENSBIXG00005021812) #36	HSD17B4 (ENSBIXG00005022565) #37	ENSBIXG00005003869
American bison	MODERN SPECIES	3152	PRRC1 (ENSBBBG00000008498) #11	MEGF10 (ENSBBBG00000013216) #12	C5orf63 (ENSBBBG00000013233) #13	ENSBBBG00000013237	MARCHF3 (ENSBBBG00000013244) #14	LMNB1 (ENSBBBG00000001642) #15	TEX43 (ENSBBBG00000013255) #16	PHAX (ENSBBBG00000002682) #17	ALDH7A1 (ENSBBBG00000013647) #18	GRAMD2B (ENSBBBG00000006943) #19	ENSBBBG00000013799	ZNF608 (ENSBBBG00000007357) #20	ENSBBBG00000002964	CSNK1G3 (ENSBBBG00000013942) #21	ENSBBBG00000003049	CEP120 (ENSBBBG00000003075) #22	PRDM6 (ENSBBBG00000003079) #23	PPIC (ENSBBBG00000003085) #24	SNX24 (ENSBBBG00000014002) #25	SNX2 (ENSBBBG00000014014) #26	ENSBBBG00000003110	ENSBBBG00000007030 #28	ENSBBBG00000014027 #29	LOX (ENSBBBG00000014035) #30	SRFBP1 (ENSBBBG00000014044) #31	FTMT (ENSBBBG00000014051) #32	ENSBBBG00000003134	PRR16 (ENSBBBG00000014064) #34	ENSBBBG00000014067
Caprinae	ANCESTRAL SPECIES	3	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000153288.a.b.a.a.mb	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00510000047104.pb.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b.i #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a.b #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00390000001440.a.b	ENSGT00940000162220 #36	ENSGT00940000158343 #37
Goat	MODERN SPECIES	26	PRRC1 (ENSCHIG00000026659) #11	MEGF10 (ENSCHIG00000025358) #12	C5orf63 (ENSCHIG00000023331) #13	ENSCHIG00000010842	MARCHF3 (ENSCHIG00000024023) #14	ENSCHIG00000008661	LMNB1 (ENSCHIG00000013615) #15	TEX43 (ENSCHIG00000019799) #16	PHAX (ENSCHIG00000019187) #17	ALDH7A1 (ENSCHIG00000008246) #18	GRAMD2B (ENSCHIG00000025691) #19	ENSCHIG00000010010	ZNF608 (ENSCHIG00000026647) #20	CSNK1G3 (ENSCHIG00000025226) #21	ENSCHIG00000009675	CEP120 (ENSCHIG00000011238) #22	PRDM6 (ENSCHIG00000025154) #23	ENSCHIG00000011061	PPIC (ENSCHIG00000015045) #24	ENSCHIG00000007585 #25	SNX2 (ENSCHIG00000007248) #26	SNCAIP (ENSCHIG00000013060) #27	ENSCHIG00000008598 #28	LOX (ENSCHIG00000017030) #30	SRFBP1 (ENSCHIG00000019724) #31	FTMT (ENSCHIG00000004660) #32	ENSCHIG00000011744	ENSCHIG00000022572	PRR16 (ENSCHIG00000003497) #34	ENSCHIG00000014731	ENSCHIG00000020713
Rambouillet Sheep	MODERN SPECIES	21	CCDC192 (ENSOARG00020003324)	CTXN3 (ENSOARG00020003384) #10	PRRC1 (ENSOARG00020003409) #11	MEGF10 (ENSOARG00020003480) #12	C5orf63 (ENSOARG00020003576) #13	ENSOARG00020003609	MARCH3 (ENSOARG00020003620) #14	LMNB1 (ENSOARG00020003667) #15	TEX43 (ENSOARG00020003771) #16	PHAX (ENSOARG00020003789) #17	ENSOARG00020003897 #18	GRAMD2B (ENSOARG00020004704) #19	ZNF608 (ENSOARG00020005272) #20	ENSOARG00020005368	CSNK1G3 (ENSOARG00020005431) #21	CEP120 (ENSOARG00020005625) #22	ENSOARG00020005831	PRDM6 (ENSOARG00020005846) #23	PPIC (ENSOARG00020005926) #24	ENSOARG00020005946 #25	SNX2 (ENSOARG00020006003) #26	ENSOARG00020006104	SNCAIP (ENSOARG00020006162) #27	ENSOARG00020006334 #28	ENSOARG00020006374 #29	LOX (ENSOARG00020006459) #30	SRFBP1 (ENSOARG00020006515) #31	FTMT (ENSOARG00020006630) #32	PRR16 (ENSOARG00020006682) #34	ENSOARG00020006760	FAM170A (ENSOARG00020006839) #36
Siberian musk deer	MODERN SPECIES	101	CTXN3 (ENSMMSG00000003894) #10	ENSMMSG00000003899	ENSMMSG00000003901	PRRC1 (ENSMMSG00000003907) #11	MEGF10 (ENSMMSG00000003923) #12	C5orf63 (ENSMMSG00000003981) #13	MARCHF3 (ENSMMSG00000003994) #14	ENSMMSG00000004009 #15	TEX43 (ENSMMSG00000004028) #16	ENSMMSG00000004037 #17	ALDH7A1 (ENSMMSG00000004048) #18	GRAMD2B (ENSMMSG00000004112) #19	ZNF608 (ENSMMSG00000014318) #20	ENSMMSG00000014341	CSNK1G3 (ENSMMSG00000014374) #21	CEP120 (ENSMMSG00000014464) #22	PRDM6 (ENSMMSG00000014526) #23	PPIC (ENSMMSG00000014546) #24	SNX24 (ENSMMSG00000014587) #25	ENSMMSG00000014598
Camelidae	ANCESTRAL SPECIES	1	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT01030000237225	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Arabian camel	MODERN SPECIES	22	FBN2 (ENSCDRG00005003090) #8	SLC12A2 (ENSCDRG00005003167) #9	CCDC192 (ENSCDRG00005003262)	PRRC1 (ENSCDRG00005003278) #11	MEGF10 (ENSCDRG00005003289) #12	C5orf63 (ENSCDRG00005003328) #13	MARCHF3 (ENSCDRG00005003350) #14	ENSCDRG00005003369	LMNB1 (ENSCDRG00005003405) #15	TEX43 (ENSCDRG00005003472) #16	PHAX (ENSCDRG00005003512) #17	ALDH7A1 (ENSCDRG00005003576) #18	GRAMD2B (ENSCDRG00005003840) #19	ZNF608 (ENSCDRG00005004125) #20	CSNK1G3 (ENSCDRG00005004199) #21	CEP120 (ENSCDRG00005004439) #22	PRDM6 (ENSCDRG00005004531) #23	PPIC (ENSCDRG00005004612) #24	SNX24 (ENSCDRG00005004649) #25	SNX2 (ENSCDRG00005004687) #26	SNCAIP (ENSCDRG00005004819) #27	ENSCDRG00005004899 #28	ENSCDRG00005004924	LOX (ENSCDRG00005004961) #30	SRFBP1 (ENSCDRG00005004973) #31	FTMT (ENSCDRG00005004988) #32	PRR16 (ENSCDRG00005005018) #34	FAM170A (ENSCDRG00005005051) #36	HSD17B4 (ENSCDRG00005005096) #37	TNFAIP8 (ENSCDRG00005005377)	DMXL1 (ENSCDRG00005005415)
Alpaca	MODERN SPECIES	4000																CEP120 (ENSVPAG00000006044) #22
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Carnivora	ANCESTRAL SPECIES	8	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Caniformia	ANCESTRAL SPECIES	5	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Mustelinae	ANCESTRAL SPECIES	38	ENSGT00390000016521	ENSGT00940000159623	ENSGT00530000063749.c.b	ENSGT00390000004950	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31
Ferret	MODERN SPECIES	241	APC (ENSMPUG00000012691)	SRP19 (ENSMPUG00000012695)	REEP5 (ENSMPUG00000012722)	DCP2 (ENSMPUG00000012723)	MCC (ENSMPUG00000012725)	ENSMPUG00000012775	FAM193B (ENSMPUG00000012776)	DDX41 (ENSMPUG00000012792)	PHAX (ENSMPUG00000012803) #17	ALDH7A1 (ENSMPUG00000012808) #18	GRAMD2B (ENSMPUG00000012892) #19	ENSMPUG00000012939	ZNF608 (ENSMPUG00000012945) #20	ENSMPUG00000012948	CSNK1G3 (ENSMPUG00000012952) #21	CEP120 (ENSMPUG00000012956) #22	PRDM6 (ENSMPUG00000012965) #23	PPIC (ENSMPUG00000012979) #24	SNX24 (ENSMPUG00000012998) #25	SNX2 (ENSMPUG00000013002) #26	SNCAIP (ENSMPUG00000013015) #27	ENSMPUG00000013023 #28	LOX (ENSMPUG00000013025) #30	SRFBP1 (ENSMPUG00000013031) #31
American mink	MODERN SPECIES	277																CEP120 (ENSNVIG00000020892) #22	PRDM6 (ENSNVIG00000020881) #23	PPIC (ENSNVIG00000020868) #24	ENSNVIG00000020860 #25	SNX2 (ENSNVIG00000020842) #26	SNCAIP (ENSNVIG00000020771) #27	ENSNVIG00000020750 #28	ENSNVIG00000020746 #29	ENSNVIG00000020736	LOX (ENSNVIG00000020722) #30	SRFBP1 (ENSNVIG00000020710) #31
Ursidae	ANCESTRAL SPECIES	16	ENSGT00950000183158.E #8	ENSGT00940000155742.g.b #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00940000168934.a	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Ursus	ANCESTRAL SPECIES	130	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742.g.b #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Polar bear	MODERN SPECIES	215	SLC27A6 (ENSUMAG00000009642) #7	FBN2 (ENSUMAG00000009691) #8	SLC12A2 (ENSUMAG00000010738) #9	CTXN3 (ENSUMAG00000017127) #10	PRRC1 (ENSUMAG00000017137) #11	MEGF10 (ENSUMAG00000017150) #12	C5orf63 (ENSUMAG00000017185) #13	MARCHF3 (ENSUMAG00000017190) #14	LMNB1 (ENSUMAG00000017194) #15	PHAX (ENSUMAG00000017214) #17	ALDH7A1 (ENSUMAG00000017407) #18	GRAMD2B (ENSUMAG00000017911) #19	ENSUMAG00000017936	ZNF608 (ENSUMAG00000017944) #20	CSNK1G3 (ENSUMAG00000017958) #21	CEP120 (ENSUMAG00000017980) #22	PRDM6 (ENSUMAG00000017993) #23	PPIC (ENSUMAG00000018024) #24	SNX24 (ENSUMAG00000018038) #25	SNX2 (ENSUMAG00000018092) #26	SNCAIP (ENSUMAG00000018292) #27	ENSUMAG00000018297 #28	ENSUMAG00000018319 #29	LOX (ENSUMAG00000018325) #30	SRFBP1 (ENSUMAG00000018340) #31	FTMT (ENSUMAG00000018370) #32	ENSUMAG00000018381 #33	PRR16 (ENSUMAG00000018387) #34	FAM170A (ENSUMAG00000018399) #36	HSD17B4 (ENSUMAG00000018411) #37	TNFAIP8 (ENSUMAG00000018436)
American black bear	MODERN SPECIES	6944																ENSUAMG00000014420 #22
Giant Panda	MODERN SPECIES	13	ENSAMEG00000026297 ##8	SLC12A2 (ENSAMEG00000005093) #9	CCDC192 (ENSAMEG00000002431)	CTXN3 (ENSAMEG00000018564) #10	PRRC1 (ENSAMEG00000028752) #11	MEGF10 (ENSAMEG00000010155) #12	C5orf63 (ENSAMEG00000010154) #13	MARCHF3 (ENSAMEG00000010126) #14	LMNB1 (ENSAMEG00000010051) #15	PHAX (ENSAMEG00000010042) #17	ALDH7A1 (ENSAMEG00000009988) #18	GRAMD2B (ENSAMEG00000009967) #19	ENSAMEG00000029691	ZNF608 (ENSAMEG00000000307) #20	CSNK1G3 (ENSAMEG00000000322) #21	CEP120 (ENSAMEG00000000345) #22	PRDM6 (ENSAMEG00000015711) #23	PPIC (ENSAMEG00000025827) #24	SNX24 (ENSAMEG00000027221) #25	SNX2 (ENSAMEG00000015717) #26	SNCAIP (ENSAMEG00000015772) #27	ENSAMEG00000018896 #28	LOX (ENSAMEG00000018055) #30	ENSAMEG00000018050 #31	FTMT (ENSAMEG00000018885) #32	ENSAMEG00000018048 #34	FAM170A (ENSAMEG00000015742) #36	HSD17B4 (ENSAMEG00000015674) #37	TNFAIP8 (ENSAMEG00000015672)	DMXL1 (ENSAMEG00000015597)	DTWD2 (ENSAMEG00000015588)
Canidae	ANCESTRAL SPECIES	9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00940000168934.a	ENSGT00940000155762	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000167085	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Canis_lupus	ANCESTRAL SPECIES	15	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000162325.A.b	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084.o #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00940000168934.a	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120.b #32	ENSGT00940000167085	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Dog	MODERN SPECIES	2	PRRC1 (ENSCAFG00845011172) #11	C11H5orf63 (ENSCAFG00845011127) #13	MEGF10 (ENSCAFG00845010856) #12	MARCHF3 (ENSCAFG00845010776) #14	ENSCAFG00845010747	LMNB1 (ENSCAFG00845010706) #15	TEX43 (ENSCAFG00845010672) #16	ENSCAFG00845010628 #17	ALDH7A1 (ENSCAFG00845010312) #18	GRAMD2B (ENSCAFG00845009842) #19	ENSCAFG00845009687	ENSCAFG00845009669	ENSCAFG00845009655	ZNF608 (ENSCAFG00845009584) #20	CSNK1G3 (ENSCAFG00845009305) #21	CEP120 (ENSCAFG00845008875) #22	PRDM6 (ENSCAFG00845008714) #23	PPIC (ENSCAFG00845008666) #24	ENSCAFG00845008579 #25	SNX2 (ENSCAFG00845008327) #26	ENSCAFG00845008139	SNCAIP (ENSCAFG00845008034) #27	ENSCAFG00845007964 #28	LOX (ENSCAFG00845007914) #30	SRFBP1 (ENSCAFG00845007751) #31	ENSCAFG00845007677 #32	ENSCAFG00845007624 #33	ENSCAFG00845007575	ENSCAFG00845007449 #33	ENSCAFG00845007375	PRR16 (ENSCAFG00845007330) #34
Dingo	MODERN SPECIES	366	CTXN3 (ENSCAFG00020010014) #10	PRRC1 (ENSCAFG00020010006) #11	MEGF10 (ENSCAFG00020009935) #12	C5orf63 (ENSCAFG00020009919) #13	MARCHF3 (ENSCAFG00020009917) #14	ENSCAFG00020009904	LMNB1 (ENSCAFG00020009857) #15	TEX43 (ENSCAFG00020009851) #16	ENSCAFG00020009834 #17	ALDH7A1 (ENSCAFG00020009827) #18	GRAMD2B (ENSCAFG00020009769) #19	ENSCAFG00020009764	ENSCAFG00020009741	ZNF608 (ENSCAFG00020009684) #20	CSNK1G3 (ENSCAFG00020009560) #21	CEP120 (ENSCAFG00020009535) #22	ENSCAFG00020009534	PRDM6 (ENSCAFG00020009527) #23	PPIC (ENSCAFG00020009505) #24	ENSCAFG00020009501 #25	SNX2 (ENSCAFG00020009477) #26	ENSCAFG00020009472	SNCAIP (ENSCAFG00020009448) #27	ENSCAFG00020009447	ENSCAFG00020009423 #28	ENSCAFG00020009417 #29	LOX (ENSCAFG00020009393) #30	SRFBP1 (ENSCAFG00020009389) #31	ENSCAFG00020009349	ENSCAFG00020009347 #32	ENSCAFG00020009303
Red fox	MODERN SPECIES	223																CEP120 (ENSVVUG00000019327) #22	PRDM6 (ENSVVUG00000019314) #23	PPIC (ENSVVUG00000019309) #24	SNX24 (ENSVVUG00000019297) #25	SNX2 (ENSVVUG00000019264) #26	SNCAIP (ENSVVUG00000019244) #27	ENSVVUG00000019226 #28	LOX (ENSVVUG00000019193) #30	SRFBP1 (ENSVVUG00000019178) #31	FTMT (ENSVVUG00000019171) #32
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00940000168615.a	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00530000064208.b.c.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Panthera	ANCESTRAL SPECIES	6	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00940000168615.a	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00940000168615.a	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00390000010089.e.a	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
leopard	MODERN SPECIES	56													ENSPPRG00000018021	ZNF608 (ENSPPRG00000007162) #20	CSNK1G3 (ENSPPRG00000006839) #21	CEP120 (ENSPPRG00000005961) #22	PRDM6 (ENSPPRG00000005265) #23	PPIC (ENSPPRG00000005132) #24	SNX24 (ENSPPRG00000004784) #25	SNX2 (ENSPPRG00000004316) #26	SNCAIP (ENSPPRG00000004130) #27	ENSPPRG00000002487 #28	LOX (ENSPPRG00000002411) #30	SRFBP1 (ENSPPRG00000001695) #31	FTMT (ENSPPRG00000017740) #32	ENSPPRG00000001192	ENSPPRG00000000460	PRR16 (ENSPPRG00000000288) #34	FAM170A (ENSPPRG00000000102) #36	HSD17B4 (ENSPPRG00000022809) #37	ENSPPRG00000024484
lion	MODERN SPECIES		SLC12A2 (ENSPLOG00000000694) #9	CTXN3 (ENSPLOG00000000556) #10	ENSPLOG00000000550	PRRC1 (ENSPLOG00000000528) #11	MEGF10 (ENSPLOG00000000476) #12	C5orf63 (ENSPLOG00000000442) #13	MARCHF3 (ENSPLOG00000000432) #14	LMNB1 (ENSPLOG00000000402) #15	TEX43 (ENSPLOG00000000306) #16	PHAX (ENSPLOG00000000284) #17	ALDH7A1 (ENSPLOG00000000210) #18	GRAMD2B (ENSPLOG00000000105) #19	ENSPLOG00000000072	ZNF608 (ENSPLOG00000000060) #20	CSNK1G3 (ENSPLOG00000000041) #21	CEP120 (ENSPLOG00000000022) #22	PRDM6 (ENSPLOG00000002242) #23	PPIC (ENSPLOG00000002229) #24	SNX24 (ENSPLOG00000002204) #25	SNX2 (ENSPLOG00000002173) #26	SNCAIP (ENSPLOG00000002107) #27	ENSPLOG00000002056 #28	ENSPLOG00000002044 #29	LOX (ENSPLOG00000002024) #30	SRFBP1 (ENSPLOG00000002002) #31	FTMT (ENSPLOG00000001991) #32	ENSPLOG00000001979	ENSPLOG00000001971	PRR16 (ENSPLOG00000001960) #34	FAM170A (ENSPLOG00000001935) #36	HSD17B4 (ENSPLOG00000001741) #37
Tiger	MODERN SPECIES	249														ZNF608 (ENSPTIG00000001822) #20	CSNK1G3 (ENSPTIG00000020385) #21	CEP120 (ENSPTIG00000017699) #22	PRDM6 (ENSPTIG00000017557) #23	PPIC (ENSPTIG00000016290) #24	SNX24 (ENSPTIG00000007867) #25	SNX2 (ENSPTIG00000000048) #26	SNCAIP (ENSPTIG00000016473) #27	ENSPTIG00000014365 #28	LOX (ENSPTIG00000013146) #30	SRFBP1 (ENSPTIG00000012305) #31	FTMT (ENSPTIG00000010963) #32	PRR16 (ENSPTIG00000009993) #34	FAM170A (ENSPTIG00000008969) #36	HSD17B4 (ENSPTIG00000015739) #37	TNFAIP8 (ENSPTIG00000013091)	DMXL1 (ENSPTIG00000011204)	DTWD2 (ENSPTIG00000010333)
Cat	MODERN SPECIES		FBN2 (ENSFCAG00000009685) #8	SLC12A2 (ENSFCAG00000038354) #9	CCDC192 (ENSFCAG00000026174)	CTXN3 (ENSFCAG00000003213) #10	PRRC1 (ENSFCAG00000028143) #11	MEGF10 (ENSFCAG00000036185) #12	CA1H5orf63 (ENSFCAG00000028551) #13	MARCHF3 (ENSFCAG00000003148) #14	LMNB1 (ENSFCAG00000003146) #15	PHAX (ENSFCAG00000001701) #17	ALDH7A1 (ENSFCAG00000031152) #18	GRAMD2B (ENSFCAG00000011618) #19	ENSFCAG00000027125	ZNF608 (ENSFCAG00000005978) #20	CSNK1G3 (ENSFCAG00000026983) #21	CEP120 (ENSFCAG00000005023) #22	PRDM6 (ENSFCAG00000026249) #23	PPIC (ENSFCAG00000008910) #24	SNX24 (ENSFCAG00000022982) #25	SNX2 (ENSFCAG00000018292) #26	SNCAIP (ENSFCAG00000010549) #27	ENSFCAG00000011609 #28	LOX (ENSFCAG00000039368) #30	SRFBP1 (ENSFCAG00000035118) #31	ENSFCAG00000029755	ENSFCAG00000023871 #33	ENSFCAG00000043811	PRR16 (ENSFCAG00000022947) #34	FAM170A (ENSFCAG00000024805) #36	HSD17B4 (ENSFCAG00000008425) #37	ENSFCAG00000035062
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Equus	ANCESTRAL SPECIES	6	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00940000154267.A.g	ENSGT00940000163833 #33	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b
Horse	MODERN SPECIES	5	MEGF10 (ENSECAG00000024752) #12	C14H5orf63 (ENSECAG00000007492) #13	MARCHF3 (ENSECAG00000007518) #14	ENSECAG00000036855	ENSECAG00000057834	LMNB1 (ENSECAG00000007942) #15	TEX43 (ENSECAG00000009955) #16	PHAX (ENSECAG00000009967) #17	ALDH7A1 (ENSECAG00000010547) #18	GRAMD2B (ENSECAG00000017800) #19	ENSECAG00000016787	ZNF608 (ENSECAG00000017943) #20	ENSECAG00000006913	ENSECAG00000060272	CSNK1G3 (ENSECAG00000019198) #21	CEP120 (ENSECAG00000021916) #22	PRDM6 (ENSECAG00000004532) #23	SNX24 (ENSECAG00000007403) #25	PPIC (ENSECAG00000006273) #24	SNX2 (ENSECAG00000007426) #26	ENSECAG00000012472	SNCAIP (ENSECAG00000012686) #27	LOX (ENSECAG00000014771) #30	ENSECAG00000001436 #28	SRFBP1 (ENSECAG00000015330) #31	FTMT (ENSECAG00000036892) #32	ENSECAG00000001605	PRR16 (ENSECAG00000016902) #34	FAM170A (ENSECAG00000017548) #36	HSD17B4 (ENSECAG00000017805) #37	TNFAIP8 (ENSECAG00000023583)
Donkey	MODERN SPECIES	3	PRRC1 (ENSEASG00005012533) #11	MEGF10 (ENSEASG00005012525) #12	C5orf63 (ENSEASG00005036217) #13	ENSEASG00005011272	MARCHF3 (ENSEASG00005012516) #14	LMNB1 (ENSEASG00005012515) #15	TEX43 (ENSEASG00005032990) #16	PHAX (ENSEASG00005012510) #17	ALDH7A1 (ENSEASG00005012505) #18	ENSEASG00005037310	ENSEASG00005024485	GRAMD2B (ENSEASG00005012499) #19	ZNF608 (ENSEASG00005012494) #20	ENSEASG00005026631	CSNK1G3 (ENSEASG00005012485) #21	CEP120 (ENSEASG00005012479) #22	PRDM6 (ENSEASG00005012472) #23	PPIC (ENSEASG00005012467) #24	ENSEASG00005027987 #25	SNX2 (ENSEASG00005012457) #26	SNCAIP (ENSEASG00005012446) #27	ENSEASG00005012436 #28	LOX (ENSEASG00005012428) #30	SRFBP1 (ENSEASG00005012421) #31	FTMT (ENSEASG00005012414) #32	ENSEASG00005012410	ENSEASG00005027167 #33	PRR16 (ENSEASG00005014891) #34	FAM170A (ENSEASG00005014905) #36	HSD17B4 (ENSEASG00005014918) #37	TNFAIP8 (ENSEASG00005033765)
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b.d #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00940000163120 #32	ENSGT00910000144204.a #34	ENSGT00940000162220 #36	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a
Greater horseshoe bat	MODERN SPECIES	25	CCDC192 (ENSRFEG00010001188)	CTXN3 (ENSRFEG00010001164) #10	PRRC1 (ENSRFEG00010001126) #11	MEGF10 (ENSRFEG00010001053) #12	C5orf63 (ENSRFEG00010001015) #13	MARCHF3 (ENSRFEG00010000985) #14	ENSRFEG00010000967	LMNB1 (ENSRFEG00010000927) #15	TEX43 (ENSRFEG00010000914) #16	ENSRFEG00010000899	PHAX (ENSRFEG00010000884) #17	ALDH7A1 (ENSRFEG00010000780) #18	GRAMD2B (ENSRFEG00010000623) #19	ZNF608 (ENSRFEG00010000499) #20	CSNK1G3 (ENSRFEG00010000419) #21	CEP120 (ENSRFEG00010000275) #22	PRDM6 (ENSRFEG00010000233) #23	PPIC (ENSRFEG00010019367) #24	SNX24 (ENSRFEG00010019276) #25	SNX2 (ENSRFEG00010019216) #26	SNCAIP (ENSRFEG00010019009) #27	ENSRFEG00010018959 #28	ENSRFEG00010018934 #29	LOX (ENSRFEG00010018895) #30	ENSRFEG00010018872 #31	FTMT (ENSRFEG00010018860) #32	PRR16 (ENSRFEG00010018796) #34	ENSRFEG00010018780	FAM170A (ENSRFEG00010018721) #36	HSD17B4 (ENSRFEG00010018033) #37	TNFAIP8 (ENSRFEG00010017937)
Microbat	MODERN SPECIES	937	FBN2 (ENSMLUG00000008374) #8	SLC12A2 (ENSMLUG00000008327) #9	CTXN3 (ENSMLUG00000009416) #10	PRRC1 (ENSMLUG00000010866) #11	MEGF10 (ENSMLUG00000010818) #12	C5orf63 (ENSMLUG00000002467) #13	MARCHF3 (ENSMLUG00000009747) #14	LMNB1 (ENSMLUG00000009721) #15	ENSMLUG00000000184 #17	ALDH7A1 (ENSMLUG00000002944) #18	GRAMD2B (ENSMLUG00000002933) #19	ENSMLUG00000028224	ENSMLUG00000023257	ZNF608 (ENSMLUG00000008677) #20	CSNK1G3 (ENSMLUG00000013708) #21	CEP120 (ENSMLUG00000015490) #22	PRDM6 (ENSMLUG00000010064) #23	PPIC (ENSMLUG00000024456) #24	SNX24 (ENSMLUG00000009392) #25	SNX2 (ENSMLUG00000007851) #26	SNCAIP (ENSMLUG00000012563) #27	ENSMLUG00000012560 #28	LOX (ENSMLUG00000026720) #30	SRFBP1 (ENSMLUG00000009984) #31	ENSMLUG00000030652	PRR16 (ENSMLUG00000016069) #34	ENSMLUG00000022953	ENSMLUG00000023391	FAM170A (ENSMLUG00000015098) #36	HSD17B4 (ENSMLUG00000009404) #37	TNFAIP8 (ENSMLUG00000009398)
Megabat	MODERN SPECIES	6364																CEP120 (ENSPVAG00000017744) #22
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000009378 #22
Hedgehog	MODERN SPECIES	6403																CEP120 (ENSEEUG00000005479) #22
Common shrew	MODERN SPECIES	10712																CEP120 (ENSSARG00000010901) #22
Marsupialia	ANCESTRAL SPECIES	33			ENSGT00940000157873	ENSGT00390000004950	ENSGT00530000063749.c.b	ENSGT00940000159623	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000159594	ENSGT00490000043356.b	ENSGT00950000182971.C	ENSGT00950000182870.a.a.a.b	ENSGT01050000244887.A.b.b	ENSGT00940000161260	ENSGT00950000182925.D.b	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565	ENSGT01100000264767
Marsupialia_b	ANCESTRAL SPECIES	18	ENSGT00940000154609.f	ENSGT00940000157873	ENSGT00390000004950	ENSGT00530000063749.c.b.e	ENSGT00940000159623	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000159594	ENSGT00490000043356.b	ENSGT00950000182971.C	ENSGT00950000182870.a.a.a.b.e	ENSGT01050000244887.A.b.b	ENSGT00940000156842.r	ENSGT00940000161260	ENSGT00950000182925.D.b	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565	ENSGT01100000264767
Diprotodontia	ANCESTRAL SPECIES	14	ENSGT00940000154609.f	ENSGT00940000157873	ENSGT00390000004950	ENSGT00530000063749.c.b.e	ENSGT00940000159623	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000159594	ENSGT00490000043356.b	ENSGT00950000182971.C	ENSGT00950000182870.a.a.a.b.e	ENSGT01050000244887.A.b.b	ENSGT00940000156842.r	ENSGT00940000161260	ENSGT00950000182925.D.b	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565	ENSGT01100000264767
Diprotodontia_a	ANCESTRAL SPECIES	13	ENSGT00940000154609.f	ENSGT00940000157873	ENSGT00390000004950	ENSGT00530000063749.c.b.e	ENSGT00940000159623	ENSGT00940000155742 #9	ENSGT00520000057704	ENSGT00940000159594	ENSGT00490000043356.b	ENSGT00950000182971.C	ENSGT00950000182870.a.a.a.b.e	ENSGT01050000244887.A.b.b	ENSGT00940000156842.r	ENSGT00940000161260	ENSGT00950000182925.D.b	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565	ENSGT01100000264767
Common wonbat	MODERN SPECIES	1043	SRP19 (ENSVURG00010015802)	APC (ENSVURG00010015764)	EPB41L4A (ENSVURG00010015717)	SLC12A2 (ENSVURG00010011940) #9	ENSVURG00010011747	ENSVURG00010011732	SEMA4D (ENSVURG00010011674)	SECISBP2 (ENSVURG00010011645)	CKS2 (ENSVURG00010011642)	ENSVURG00010011638	ENSVURG00010011625	S1PR3 (ENSVURG00010011620)	ENSVURG00010011610	NXNL2 (ENSVURG00010011602)	ENSVURG00010011593	CEP120 (ENSVURG00010011539) #22	PRDM6 (ENSVURG00010011514) #23	PPIC (ENSVURG00010011501) #24	SNX24 (ENSVURG00010011487) #25	SNX2 (ENSVURG00010011441) #26	SNCAIP (ENSVURG00010011390) #27	ENSVURG00010011370 #28	LOX (ENSVURG00010011351) #30	SRFBP1 (ENSVURG00010011339) #31	ENSVURG00010011332	PRR16 (ENSVURG00010011319) #34	HSD17B4 (ENSVURG00010011297) #37	TNFAIP8 (ENSVURG00010011274)	DMXL1 (ENSVURG00010010777)	DTWD2 (ENSVURG00010010691)	ENSVURG00010010654
koala	MODERN SPECIES	137	ENSPCIG00000010276	ENSPCIG00000036958	ENSPCIG00000010277	ENSPCIG00000035124	ENSPCIG00000010279	SLC12A2 (ENSPCIG00000010286) #9	CCDC192 (ENSPCIG00000010293)	SEMA4D (ENSPCIG00000010300)	SECISBP2 (ENSPCIG00000010304)	CKS2 (ENSPCIG00000010305)	SHC3 (ENSPCIG00000000220)	S1PR3 (ENSPCIG00000000130)	ENSPCIG00000021928	NXNL2 (ENSPCIG00000021927)	ENSPCIG00000021926	CEP120 (ENSPCIG00000021920) #22	PRDM6 (ENSPCIG00000015716) #23	PPIC (ENSPCIG00000027269) #24	SNX24 (ENSPCIG00000027271) #25	SNX2 (ENSPCIG00000026934) #26	ENSPCIG00000031617	SNCAIP (ENSPCIG00000019685) #27	ENSPCIG00000028536 #28	LOX (ENSPCIG00000028533) #30	SRFBP1 (ENSPCIG00000028532) #31	ENSPCIG00000028531	ENSPCIG00000018258	PRR16 (ENSPCIG00000034540) #34
Wallaby	MODERN SPECIES	7715																ENSMEUG00000013685 #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000011965	ENSSHAG00000028339	SRP19 (ENSSHAG00000028906)	ENSSHAG00000001133	ENSSHAG00000020566	ENSSHAG00000002763 #9	ENSSHAG00000027428	ENSSHAG00000023340	SECISBP2 (ENSSHAG00000005947)	ENSSHAG00000031203	SHC3 (ENSSHAG00000001805)	S1PR3 (ENSSHAG00000031138)	ENSSHAG00000029696	ENSSHAG00000006013	ENSSHAG00000026542	ENSSHAG00000006623 #22	PRDM6 (ENSSHAG00000009542) #23	PPIC (ENSSHAG00000011058) #24	SNX24 (ENSSHAG00000011329) #25	SNX2 (ENSSHAG00000012882) #26	ENSSHAG00000029451	SNCAIP (ENSSHAG00000014503) #27	ENSSHAG00000022030	ENSSHAG00000015432 #28	LOX (ENSSHAG00000028534) #30	SRFBP1 (ENSSHAG00000020966) #31	ENSSHAG00000028557	PRR16 (ENSSHAG00000024340) #34	ENSSHAG00000025921	HSD17B4 (ENSSHAG00000005224) #37	TNFAIP8 (ENSSHAG00000007788)
Opossum	MODERN SPECIES	5		MINAR2 (ENSMODG00000013268)	REEP5 (ENSMODG00000013272)	SRP19 (ENSMODG00000013278)	APC (ENSMODG00000013281)	EPB41L4A (ENSMODG00000013316)	SLC12A2 (ENSMODG00000013329) #9	CCDC192 (ENSMODG00000029220)	SEMA4D (ENSMODG00000013348)	SECISBP2 (ENSMODG00000013365)	CKS2 (ENSMODG00000013369)	SHC3 (ENSMODG00000013379)	S1PR3 (ENSMODG00000013382)	NXNL2 (ENSMODG00000013386)	ENSMODG00000013395	CEP120 (ENSMODG00000013411) #22	PRDM6 (ENSMODG00000013415) #23	PPIC (ENSMODG00000013425) #24	SNX24 (ENSMODG00000013427) #25	SNX2 (ENSMODG00000013436) #26	SNCAIP (ENSMODG00000013460) #27	ENSMODG00000013464 #28	ENSMODG00000025417	ENSMODG00000046897	ENSMODG00000028219	LOX (ENSMODG00000013484) #30	SRFBP1 (ENSMODG00000013487) #31	PRR16 (ENSMODG00000013488) #34	ENSMODG00000046927	ENSMODG00000048225	HSD17B4 (ENSMODG00000013536) #37
Platypus	MODERN SPECIES	88	ENSOANG00000037223	MTAP (ENSOANG00000013963)	ENSOANG00000045164	LMNB1 (ENSOANG00000011225) #15	ENSOANG00000040947 #16	ENSOANG00000048601	ENSOANG00000041735 #19	PHAX (ENSOANG00000012052) #17	ALDH7A1 (ENSOANG00000002544) #18	ENSOANG00000049707 #19	ENSOANG00000045009	ENSOANG00000014072 #19	ENSOANG00000042557	ZNF608 (ENSOANG00000014652) #20	CSNK1G3 (ENSOANG00000011556) #21	CEP120 (ENSOANG00000008791) #22	PRDM6 (ENSOANG00000001527) #23	PPIC (ENSOANG00000010050) #24	SNX24 (ENSOANG00000010049) #25	SNX2 (ENSOANG00000010048) #26	SNCAIP (ENSOANG00000010047) #27	ENSOANG00000042757 #28	ENSOANG00000010046	LOX (ENSOANG00000010043) #30	SRFBP1 (ENSOANG00000010042) #31	PRR16 (ENSOANG00000012502) #34	HSD17B4 (ENSOANG00000002946) #37	TNFAIP8 (ENSOANG00000006164)	DMXL1 (ENSOANG00000011538)	DTWD2 (ENSOANG00000022566)	SEMA6A (ENSOANG00000008223)
Sauria	ANCESTRAL SPECIES	5	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Episquamata	ANCESTRAL SPECIES	6	ENSGT00390000006753.B	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00390000006753.B	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Elapidae	ANCESTRAL SPECIES	7	ENSGT00390000006753.B	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.c.b #18	ENSGT00940000154938.c.a #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00390000000134.b.lb.b
Indian cobra	DUPLICATION
Indian cobra	MODERN SPECIES	1	ISOC1 (ENSNNAG00000000839)	ENSNNAG00000000855 #8	ENSNNAG00000000875 #8	SLC12A2 (ENSNNAG00000000896) #9	MEGF10 (ENSNNAG00000000929) #12	C5orf63 (ENSNNAG00000000978) #13	MARCHF3 (ENSNNAG00000001000) #14	LMNB1 (ENSNNAG00000001019) #15	TEX43 (ENSNNAG00000001039) #16	PHAX (ENSNNAG00000001051) #17	ALDH7A1 (ENSNNAG00000001067) #18	GRAMD2B (ENSNNAG00000001106) #19	ZNF608 (ENSNNAG00000001150) #20	CSNK1G3 (ENSNNAG00000001220) #21	ENSNNAG00000001301 #22	ENSNNAG00000001321 #22	PRDM6 (ENSNNAG00000001349) #23	PPIC (ENSNNAG00000001378) #24	SNX24 (ENSNNAG00000001389) #25	SNX2 (ENSNNAG00000001427) #26	SNCAIP (ENSNNAG00000001468) #27	ENSNNAG00000001479 #28	ENSNNAG00000001489	LOX (ENSNNAG00000001498) #30	SRFBP1 (ENSNNAG00000001507) #31	PRR16 (ENSNNAG00000001516) #34	HSD17B4 (ENSNNAG00000001529) #37	TNFAIP8 (ENSNNAG00000001550)	DMXL1 (ENSNNAG00000001609)	DTWD2 (ENSNNAG00000001723)	ENSNNAG00000001738
Indian cobra	MODERN SPECIES	1	ADAMTS19 (ENSNNAG00000000746)	ISOC1 (ENSNNAG00000000839)	ENSNNAG00000000855 #8	ENSNNAG00000000875 #8	SLC12A2 (ENSNNAG00000000896) #9	MEGF10 (ENSNNAG00000000929) #12	C5orf63 (ENSNNAG00000000978) #13	MARCHF3 (ENSNNAG00000001000) #14	LMNB1 (ENSNNAG00000001019) #15	TEX43 (ENSNNAG00000001039) #16	PHAX (ENSNNAG00000001051) #17	ALDH7A1 (ENSNNAG00000001067) #18	GRAMD2B (ENSNNAG00000001106) #19	ZNF608 (ENSNNAG00000001150) #20	CSNK1G3 (ENSNNAG00000001220) #21	ENSNNAG00000001301 #22	ENSNNAG00000001321 #22	PRDM6 (ENSNNAG00000001349) #23	PPIC (ENSNNAG00000001378) #24	SNX24 (ENSNNAG00000001389) #25	SNX2 (ENSNNAG00000001427) #26	SNCAIP (ENSNNAG00000001468) #27	ENSNNAG00000001479 #28	ENSNNAG00000001489	LOX (ENSNNAG00000001498) #30	SRFBP1 (ENSNNAG00000001507) #31	PRR16 (ENSNNAG00000001516) #34	HSD17B4 (ENSNNAG00000001529) #37	TNFAIP8 (ENSNNAG00000001550)	DMXL1 (ENSNNAG00000001609)	DTWD2 (ENSNNAG00000001723)
Elapidae_a	ANCESTRAL SPECIES	9	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.c.b #18	ENSGT00940000154938.d #18	ENSGT00940000154938.c.a #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00390000000134.b.lb.b
Acanthophiinae	ANCESTRAL SPECIES	9	ENSGT00390000006753.B	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938.c.b #18	ENSGT00940000154938.c.a #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00390000000134.b.lb.b
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	1	ISOC1 (ENSNSUG00000013803)	FBN2 (ENSNSUG00000013802) #8	SLC12A2 (ENSNSUG00000013798) #9	CTXN3 (ENSNSUG00000013797) #10	MEGF10 (ENSNSUG00000013796) #12	C5orf63 (ENSNSUG00000013794) #13	MARCHF3 (ENSNSUG00000013793) #14	LMNB1 (ENSNSUG00000013792) #15	TEX43 (ENSNSUG00000013791) #16	PHAX (ENSNSUG00000013790) #17	ALDH7A1 (ENSNSUG00000013789) #18	GRAMD2B (ENSNSUG00000013788) #19	ZNF608 (ENSNSUG00000013786) #20	CSNK1G3 (ENSNSUG00000013567) #21	ENSNSUG00000013566 #22	ENSNSUG00000013565 #22	PRDM6 (ENSNSUG00000013564) #23	PPIC (ENSNSUG00000013563) #24	SNX24 (ENSNSUG00000013562) #25	SNX2 (ENSNSUG00000013561) #26	ENSNSUG00000013560	SNCAIP (ENSNSUG00000013559) #27	ENSNSUG00000013558 #28	ENSNSUG00000013557 #29	ENSNSUG00000013556	LOX (ENSNSUG00000013555) #30	SRFBP1 (ENSNSUG00000013554) #31	PRR16 (ENSNSUG00000013553) #34	ENSNSUG00000013552	ENSNSUG00000013551	HSD17B4 (ENSNSUG00000013550) #37
Mainland tiger snake	MODERN SPECIES	1	ADAMTS19 (ENSNSUG00000013805)	ISOC1 (ENSNSUG00000013803)	FBN2 (ENSNSUG00000013802) #8	SLC12A2 (ENSNSUG00000013798) #9	CTXN3 (ENSNSUG00000013797) #10	MEGF10 (ENSNSUG00000013796) #12	C5orf63 (ENSNSUG00000013794) #13	MARCHF3 (ENSNSUG00000013793) #14	LMNB1 (ENSNSUG00000013792) #15	TEX43 (ENSNSUG00000013791) #16	PHAX (ENSNSUG00000013790) #17	ALDH7A1 (ENSNSUG00000013789) #18	GRAMD2B (ENSNSUG00000013788) #19	ZNF608 (ENSNSUG00000013786) #20	CSNK1G3 (ENSNSUG00000013567) #21	ENSNSUG00000013566 #22	ENSNSUG00000013565 #22	PRDM6 (ENSNSUG00000013564) #23	PPIC (ENSNSUG00000013563) #24	SNX24 (ENSNSUG00000013562) #25	SNX2 (ENSNSUG00000013561) #26	ENSNSUG00000013560	SNCAIP (ENSNSUG00000013559) #27	ENSNSUG00000013558 #28	ENSNSUG00000013557 #29	ENSNSUG00000013556	LOX (ENSNSUG00000013555) #30	SRFBP1 (ENSNSUG00000013554) #31	PRR16 (ENSNSUG00000013553) #34	ENSNSUG00000013552	ENSNSUG00000013551
Eastern brown snake	MODERN SPECIES	2												ENSPTXG00000002421 #18	GRAMD2B (ENSPTXG00000002420) #19	ZNF608 (ENSPTXG00000002419) #20	CSNK1G3 (ENSPTXG00000002417) #21	CEP120 (ENSPTXG00000001773) #22	PRDM6 (ENSPTXG00000001772) #23	PPIC (ENSPTXG00000001771) #24	SNX24 (ENSPTXG00000001770) #25	SNX2 (ENSPTXG00000001769) #26	SNCAIP (ENSPTXG00000001768) #27	ENSPTXG00000001767 #28	ENSPTXG00000001766 #29	LOX (ENSPTXG00000001765) #30	SRFBP1 (ENSPTXG00000001763) #31	PRR16 (ENSPTXG00000001762) #34	HSD17B4 (ENSPTXG00000001761) #37	TNFAIP8 (ENSPTXG00000001760)	DMXL1 (ENSPTXG00000001471)	DTWD2 (ENSPTXG00000001411)	ENSPTXG00000001410
Blue-lipped sea krait	MODERN SPECIES	8229																CEP120 (ENSLLTG00000011324) #22
Lizard	MODERN SPECIES	807							TEX43 (ENSACAG00000038889) #16	PHAX (ENSACAG00000002878) #17	ALDH7A1 (ENSACAG00000002899) #18	ENSACAG00000042166	ENSACAG00000040239	GRAMD2B (ENSACAG00000023904) #19	ZNF608 (ENSACAG00000003135) #20	ENSACAG00000043467	CSNK1G3 (ENSACAG00000003167) #21	CEP120 (ENSACAG00000003259) #22	PRDM6 (ENSACAG00000003401) #23	PPIC (ENSACAG00000039749) #24	ENSACAG00000035734	ENSACAG00000037199	SNX24 (ENSACAG00000003449) #25	SNX2 (ENSACAG00000003451) #26	ENSACAG00000036099	SNCAIP (ENSACAG00000023071) #27	ENSACAG00000003682 #28	LOX (ENSACAG00000003698) #30	SRFBP1 (ENSACAG00000003779) #31	ENSACAG00000043368	PRR16 (ENSACAG00000003793) #34	HSD17B4 (ENSACAG00000003796) #37	TNFAIP8 (ENSACAG00000003983)
Laterata	ANCESTRAL SPECIES	8	ENSGT00390000006753.B	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565.w	ENSGT00390000001500
Common wall lizard	MODERN SPECIES	2	FBN2 (ENSPMRG00000018232) #8	SLC12A2 (ENSPMRG00000016289) #9	ENSPMRG00000016051 #10	ENSPMRG00000016048 #10	MEGF10 (ENSPMRG00000016004) #12	ENSPMRG00000015984	MARCHF3 (ENSPMRG00000015974) #14	LMNB1 (ENSPMRG00000015954) #15	TEX43 (ENSPMRG00000015944) #16	PHAX (ENSPMRG00000015927) #17	ALDH7A1 (ENSPMRG00000015851) #18	ENSPMRG00000015835	GRAMD2B (ENSPMRG00000015795) #19	ZNF608 (ENSPMRG00000015766) #20	CSNK1G3 (ENSPMRG00000015720) #21	CEP120 (ENSPMRG00000015529) #22	PRDM6 (ENSPMRG00000015497) #23	PPIC (ENSPMRG00000015485) #24	SNX24 (ENSPMRG00000015475) #25	ENSPMRG00000015469	SNX2 (ENSPMRG00000015453) #26	SNCAIP (ENSPMRG00000015440) #27	ENSPMRG00000015434 #29	LOX (ENSPMRG00000015428) #30	SRFBP1 (ENSPMRG00000015411) #31	PRR16 (ENSPMRG00000015405) #34	ENSPMRG00000015400	HSD17B4 (ENSPMRG00000015361) #37	DMXL1 (ENSPMRG00000012477)	DTWD2 (ENSPMRG00000012140)	ENSPMRG00000012137
Argentine black and white tegu	MODERN SPECIES	25	SLC27A6 (ENSSMRG00000019298) #7	FBN2 (ENSSMRG00000019301) #8	SLC12A2 (ENSSMRG00000019317) #9	ENSSMRG00000019318	CTXN3 (ENSSMRG00000019326) #10	MEGF10 (ENSSMRG00000019328) #12	C5orf63 (ENSSMRG00000019329) #13	MARCHF3 (ENSSMRG00000019330) #14	LMNB1 (ENSSMRG00000019332) #15	PHAX (ENSSMRG00000019333) #17	TEX43 (ENSSMRG00000019334) #16	ALDH7A1 (ENSSMRG00000019335) #18	GRAMD2B (ENSSMRG00000019336) #19	ZNF608 (ENSSMRG00000019339) #20	CSNK1G3 (ENSSMRG00000019342) #21	CEP120 (ENSSMRG00000019343) #22	ENSSMRG00000019344	PRDM6 (ENSSMRG00000019345) #23	PPIC (ENSSMRG00000019346) #24	SNX24 (ENSSMRG00000019347) #25	SNX2 (ENSSMRG00000019348) #26	SNCAIP (ENSSMRG00000019349) #27	ENSSMRG00000019350 #28	ENSSMRG00000019351	LOX (ENSSMRG00000019352) #30	SRFBP1 (ENSSMRG00000019353) #31	PRR16 (ENSSMRG00000019354) #34
tuatara	MODERN SPECIES	249																CEP120 (ENSSPUG00000003179) #22	PRDM6 (ENSSPUG00000003144) #23	PPIC (ENSSPUG00000003122) #24	SNX24 (ENSSPUG00000003104) #25	SNX2 (ENSSPUG00000003094) #26
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Aves	ANCESTRAL SPECIES	4	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Neognathae	ANCESTRAL SPECIES	19	ENSGT00530000063749.c.b	ENSGT00390000004950	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Galloanserae	ANCESTRAL SPECIES	18	ENSGT00530000063749.c.b	ENSGT00390000004950	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Anatidae	ANCESTRAL SPECIES	12	ENSGT00530000063749.c.b	ENSGT00390000004950	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00950000182904.a.b.a	ENSGT00940000158373.a	ENSGT00950000183128.A	ENSGT00940000167760	ENSGT00940000158626	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Duck	MODERN SPECIES	4281	EPB41L4A (ENSAPLG00000015395)	APC (ENSAPLG00000001412)	SRP19 (ENSAPLG00000002624)	REEP5 (ENSAPLG00000002639)	DCP2 (ENSAPLG00000013540)	MCC (ENSAPLG00000013663)	YTHDC2 (ENSAPLG00000013814)	KCNN2 (ENSAPLG00000013890)	PGGT1B (ENSAPLG00000012581)	FEM1C (ENSAPLG00000012870)	ALDH7A1 (ENSAPLG00000012964) #18	GRAMD2B (ENSAPLG00000013303) #19	ENSAPLG00000025614	ZNF608 (ENSAPLG00000016239) #20	CSNK1G3 (ENSAPLG00000003019) #21	CEP120 (ENSAPLG00000001549) #22	PRDM6 (ENSAPLG00000001327) #23	PPIC (ENSAPLG00000000974) #24	SNX24 (ENSAPLG00000000948) #25	SNX2 (ENSAPLG00000015741) #26	ENSAPLG00000021138	SNCAIP (ENSAPLG00000015309) #27	ENSAPLG00000015169 #28	ENSAPLG00000024534 #29	LOX (ENSAPLG00000003826) #30	SRFBP1 (ENSAPLG00000003938) #31	ENSAPLG00000021766	PRR16 (ENSAPLG00000007951) #34	HSD17B4 (ENSAPLG00000009938) #37	TNFAIP8 (ENSAPLG00000001924)	DMXL1 (ENSAPLG00000009280)
Pink-footed goose	MODERN SPECIES	246															ENSABRG00000021701	CEP120 (ENSABRG00000021707) #22	PRDM6 (ENSABRG00000021726) #23	PPIC (ENSABRG00000021728) #24	SNX24 (ENSABRG00000021732) #25	SNX2 (ENSABRG00000021733) #26	SNCAIP (ENSABRG00000021743) #27	ENSABRG00000021749 #28	ENSABRG00000021750 #29	LOX (ENSABRG00000021751) #30	SRFBP1 (ENSABRG00000021752) #31	ENSABRG00000021755	ENSABRG00000021756
Phasianidae	ANCESTRAL SPECIES	5				ENSGT00940000154889	ENSGT00940000159636	ENSGT00950000183041.B	ENSGT00940000158578	ENSGT00940000160246	ENSGT00390000018004	ENSGT00940000164838	ENSGT00390000012666	ENSGT00390000015138	ENSGT00530000063169.b.a	ENSGT00950000183035.b	ENSGT00940000163364	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00390000008748.a.d #20	ENSGT00940000156980 #19	ENSGT00940000154938 #18	ENSGT00940000158626	ENSGT00940000153988.B	ENSGT00950000183128.A	ENSGT00940000158373	ENSGT00940000163078.c
Phasianidae_b	ANCESTRAL SPECIES	5				ENSGT00940000154889	ENSGT00940000159636	ENSGT00950000183041.B	ENSGT00940000158578	ENSGT00940000160246	ENSGT00390000018004	ENSGT00940000164838	ENSGT00390000012666	ENSGT00390000015138	ENSGT00530000063169.b.a	ENSGT00950000183035.b	ENSGT00940000163364	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00390000008748.a.d #20	ENSGT00940000156980 #19	ENSGT00940000154938 #18	ENSGT00940000158626	ENSGT00940000153988.B	ENSGT00950000183128.A	ENSGT00940000158373	ENSGT00940000163078.c
Chicken	MODERN SPECIES	131				MELK (ENSGALG00010001237)	PAX5 (ENSGALG00010001212)	ZCCHC7 (ENSGALG00010001182)	GRHPR (ENSGALG00010001179)	ZBTB5 (ENSGALG00010001178)	POLR1E (ENSGALG00010001171)	DCAF10 (ENSGALG00010001170)	ENSGALG00010001169	ENSGALG00010001165	TRMT10B (ENSGALG00010001160)	FRMPD1 (ENSGALG00010001158)	TOMM5 (ENSGALG00010001191)	CEP120 (ENSGALG00010001306) #22	PRDM6 (ENSGALG00010001215) #23	PPIC (ENSGALG00010001213) #24	SNX24 (ENSGALG00010001400) #25	SNX2 (ENSGALG00010001204) #26	SNCAIP (ENSGALG00010001252) #27	ENSGALG00010001241	ENSGALG00010001240	LOX (ENSGALG00010001292) #30	SRFBP1 (ENSGALG00010001286) #31	ENSGALG00010001276	ZNF608 (ENSGALG00010001195) #20	GRAMD2B (ENSGALG00010001221) #19	ALDH7A1 (ENSGALG00010001156) #18	FEM1C (ENSGALG00010001152)	CCDC112 (ENSGALG00010001151)
Turkey	MODERN SPECIES	1299							PAX5 (ENSMGAG00000018247)	ZCCHC7 (ENSMGAG00000016356)	GRHPR (ENSMGAG00000009118)	ZBTB5 (ENSMGAG00000016120)	POLR1E (ENSMGAG00000009105)	ENSMGAG00000003194	ENSMGAG00000018404	ENSMGAG00000018399	ENSMGAG00000021818	CEP120 (ENSMGAG00000009057) #22	PPIC (ENSMGAG00000009053) #24	SNX24 (ENSMGAG00000021632) #25	SNX2 (ENSMGAG00000009003) #26	SNCAIP (ENSMGAG00000008968) #27	ENSMGAG00000021928	SRFBP1 (ENSMGAG00000008994) #31	ENSMGAG00000017147	ENSMGAG00000004938 #20	ENSMGAG00000020762 #20	ENSMGAG00000009618 #18	ENSMGAG00000019553	PGGT1B (ENSMGAG00000002540)	CCDC112 (ENSMGAG00000022143)	ENSMGAG00000016266	ENSMGAG00000019771
Japanese quail	MODERN SPECIES	699			ENSCJPG00005006244	PAX5 (ENSCJPG00005006237)	ZCCHC7 (ENSCJPG00005006234)	GRHPR (ENSCJPG00005006229)	ZBTB5 (ENSCJPG00005006228)	POLR1E (ENSCJPG00005006224)	ENSCJPG00005006223	DCAF10 (ENSCJPG00005006222)	ENSCJPG00005006221	TRMT10B (ENSCJPG00005006213)	FRMPD1 (ENSCJPG00005006207)	TOMM5 (ENSCJPG00005006206)	ENSCJPG00005006205	CEP120 (ENSCJPG00005006152) #22	PRDM6 (ENSCJPG00005006144) #23	PPIC (ENSCJPG00005006126) #24	SNX24 (ENSCJPG00005006120) #25	SNX2 (ENSCJPG00005006112) #26	SNCAIP (ENSCJPG00005006097) #27	ENSCJPG00005006090	LOX (ENSCJPG00005006086) #30	SRFBP1 (ENSCJPG00005006084) #31	ENSCJPG00005006079	ZNF608 (ENSCJPG00005006067) #20	GRAMD2B (ENSCJPG00005006046) #19	ALDH7A1 (ENSCJPG00005006039) #18	FEM1C (ENSCJPG00005006038)	CCDC112 (ENSCJPG00005006035)	PGGT1B (ENSCJPG00005006034)
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00530000063749.c.b	ENSGT00390000004950	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626.d	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Passeriformes	ANCESTRAL SPECIES	45						ENSGT00940000155826.i	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626.d	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Great tit	MODERN SPECIES	642	ENSPMJG00000005778	ALDOB (ENSPMJG00000005774)	ENSPMJG00000005759	ENSPMJG00000005756	PLPPR1 (ENSPMJG00000005754)	ENSPMJG00000005743	KCNN2 (ENSPMJG00000005733)	TRIM36 (ENSPMJG00000005711)	PGGT1B (ENSPMJG00000005704)	CCDC112 (ENSPMJG00000005699)	FEM1C (ENSPMJG00000005696)	ALDH7A1 (ENSPMJG00000005693) #18	GRAMD2B (ENSPMJG00000005685) #19	ZNF608 (ENSPMJG00000005666) #20	CSNK1G3 (ENSPMJG00000005645) #21	CEP120 (ENSPMJG00000005628) #22	PRDM6 (ENSPMJG00000005625) #23	PPIC (ENSPMJG00000005621) #24	SNX24 (ENSPMJG00000005620) #25	ENSPMJG00000005618	SNX2 (ENSPMJG00000005601) #26	SNCAIP (ENSPMJG00000005584) #27	ENSPMJG00000005581 #28	LOX (ENSPMJG00000005577) #30	SRFBP1 (ENSPMJG00000005571) #31	PRR16 (ENSPMJG00000005559) #34	HSD17B4 (ENSPMJG00000005532) #37	TNFAIP8 (ENSPMJG00000005515)	DMXL1 (ENSPMJG00000005508)	DTWD2 (ENSPMJG00000005505)	SEMA6A (ENSPMJG00000005483)
Passeriformes_d	ANCESTRAL SPECIES	41						ENSGT00940000155826.i	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626.d	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Passeriformes_g	ANCESTRAL SPECIES	49						ENSGT00940000155826.i	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626.d	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Medium ground finch	MODERN SPECIES	107											ENSGFOG00000013614	ALDH7A1 (ENSGFOG00000013622) #18	GRAMD2B (ENSGFOG00000013632) #19	ZNF608 (ENSGFOG00000013634) #20	CSNK1G3 (ENSGFOG00000013637) #21	CEP120 (ENSGFOG00000013643) #22	PRDM6 (ENSGFOG00000013650) #23	PPIC (ENSGFOG00000013654) #24	SNX24 (ENSGFOG00000013657) #25	SNX2 (ENSGFOG00000013660) #26	SNCAIP (ENSGFOG00000013666) #27	ENSGFOG00000013670 #28	ENSGFOG00000013671 #29	SRFBP1 (ENSGFOG00000013674) #31	PRR16 (ENSGFOG00000001896) #34	ENSGFOG00000002084	ENSGFOG00000002194
Passeroidea	ANCESTRAL SPECIES	48						ENSGT00940000155826.i	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626.d	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Zebra finch	MODERN SPECIES	104	SRP19 (ENSTGUG00000001019)	REEP5 (ENSTGUG00000001029)	DCP2 (ENSTGUG00000027852)	MCC (ENSTGUG00000001036)	ENSTGUG00000001058	ENSTGUG00000021625	APBA1 (ENSTGUG00000001066)	PTAR1 (ENSTGUG00000026598)	ENSTGUG00000028875	ENSTGUG00000018427	RHOBTB3 (ENSTGUG00000001089)	RFESD (ENSTGUG00000001096)	ZNF608 (ENSTGUG00000001100) #20	ENSTGUG00000019870	CSNK1G3 (ENSTGUG00000001103) #21	CEP120 (ENSTGUG00000001104) #22	PRDM6 (ENSTGUG00000001115) #23	SNX24 (ENSTGUG00000001121) #25	PPIC (ENSTGUG00000001116) #24	SNX2 (ENSTGUG00000001125) #26	SNCAIP (ENSTGUG00000001137) #27	ENSTGUG00000001143 #28	LOX (ENSTGUG00000025970) #30	SRFBP1 (ENSTGUG00000021782) #31	PRR16 (ENSTGUG00000001152) #34	HSD17B4 (ENSTGUG00000001154) #37	TNFAIP8 (ENSTGUG00000017552)	DMXL1 (ENSTGUG00000017551)	DTWD2 (ENSTGUG00000025374)	ENSTGUG00000023019	SEMA6A (ENSTGUG00000017547)
Common canary	MODERN SPECIES	40	MRPL50 (ENSSCAG00000004936)	PLPPR1 (ENSSCAG00000004941)	RFESD (ENSSCAG00000004952)	RHOBTB3 (ENSSCAG00000004958)	ENSSCAG00000004968	ENSSCAG00000004980	KCNN2 (ENSSCAG00000005002)	TRIM36 (ENSSCAG00000005019)	PGGT1B (ENSSCAG00000005031)	CCDC112 (ENSSCAG00000005045)	ENSSCAG00000005057	ALDH7A1 (ENSSCAG00000005102) #18	GRAMD2B (ENSSCAG00000005170) #19	ZNF608 (ENSSCAG00000005180) #20	CSNK1G3 (ENSSCAG00000005190) #21	CEP120 (ENSSCAG00000005198) #22	PRDM6 (ENSSCAG00000005206) #23	PPIC (ENSSCAG00000005209) #24	SNX24 (ENSSCAG00000005214) #25	ENSSCAG00000005219 #26	SNCAIP (ENSSCAG00000005224) #27	ENSSCAG00000005227 #28	ENSSCAG00000005228 #29	LOX (ENSSCAG00000005233) #30	SRFBP1 (ENSSCAG00000005236) #31	PRR16 (ENSSCAG00000005241) #34	HSD17B4 (ENSSCAG00000005251) #37	TNFAIP8 (ENSSCAG00000005279)	DMXL1 (ENSSCAG00000005285)	DTWD2 (ENSSCAG00000005293)	ENSSCAG00000005295
Flycatcher	MODERN SPECIES	259															CSNK1G3 (ENSFALG00000007491) #21	CEP120 (ENSFALG00000007506) #22	PRDM6 (ENSFALG00000007522) #23	PPIC (ENSFALG00000007527) #24	SNX2 (ENSFALG00000007544) #26	SNCAIP (ENSFALG00000007573) #27	ENSFALG00000007585 #28	ENSFALG00000025195 #28	ENSFALG00000025920 #28	LOX (ENSFALG00000007577) #30	SRFBP1 (ENSFALG00000007595) #31
Neognathae_c	ANCESTRAL SPECIES	2	ENSGT00530000063749.c.b	ENSGT00390000004950	ENSGT00940000157873	ENSGT00390000018878	ENSGT00530000063974.b	ENSGT00940000155826	ENSGT00950000182904.a.b.a	ENSGT00940000158373	ENSGT00950000183128.A	ENSGT00940000153988.B	ENSGT00940000158626.d.a	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Golden eagle	MODERN SPECIES	91	DCP2 (ENSACCG00020015827)	MCC (ENSACCG00020015790)	ENSACCG00020015762	PGGT1B (ENSACCG00020015745)	ENSACCG00020015730	KCNN2 (ENSACCG00020015722)	ENSACCG00020015711	ENSACCG00020015551	CCDC112 (ENSACCG00020015397)	FEM1C (ENSACCG00020015384)	ALDH7A1 (ENSACCG00020015339) #18	GRAMD2B (ENSACCG00020015300) #19	ENSACCG00020015288	ZNF608 (ENSACCG00020015276) #20	CSNK1G3 (ENSACCG00020015217) #21	CEP120 (ENSACCG00020015182) #22	PRDM6 (ENSACCG00020015165) #23	PPIC (ENSACCG00020015146) #24	SNX24 (ENSACCG00020015128) #25	SNX2 (ENSACCG00020015075) #26	SNCAIP (ENSACCG00020015035) #27	ENSACCG00020015011 #28	ENSACCG00020015001 #29	LOX (ENSACCG00020014978) #30	SRFBP1 (ENSACCG00020014944) #31	ENSACCG00020014926	PRR16 (ENSACCG00020014916) #34	HSD17B4 (ENSACCG00020014899) #37	TNFAIP8 (ENSACCG00020014874)	DMXL1 (ENSACCG00020014442)	DTWD2 (ENSACCG00020013814)
Kakapo	MODERN SPECIES	19	SRP19 (ENSSHBG00005003764)	REEP5 (ENSSHBG00005003772)	DCP2 (ENSSHBG00005003786)	MCC (ENSSHBG00005003810)	YTHDC2 (ENSSHBG00005003860)	ENSSHBG00005003894	TRIM36 (ENSSHBG00005003917)	PGGT1B (ENSSHBG00005003937)	CCDC112 (ENSSHBG00005003955)	ENSSHBG00005003972	ALDH7A1 (ENSSHBG00005003993) #18	GRAMD2B (ENSSHBG00005000663) #19	ENSSHBG00005000664	ZNF608 (ENSSHBG00005000665) #20	CSNK1G3 (ENSSHBG00005009316) #21	CEP120 (ENSSHBG00005009352) #22	PRDM6 (ENSSHBG00005009704) #23	PPIC (ENSSHBG00005009713) #24	SNX24 (ENSSHBG00005009723) #25	SNX2 (ENSSHBG00005009745) #26	SNCAIP (ENSSHBG00005009782) #27	ENSSHBG00005009803 #28	ENSSHBG00005009811	LOX (ENSSHBG00005009825) #30	SRFBP1 (ENSSHBG00005009842) #31	PRR16 (ENSSHBG00005009872) #34	HSD17B4 (ENSSHBG00005009890) #37	TNFAIP8 (ENSSHBG00005009903)	DMXL1 (ENSSHBG00005011471)	DTWD2 (ENSSHBG00005019284)	ENSSHBG00005019285
African ostrich	MODERN SPECIES	947	FBN2 (ENSSCUG00000017154) #8	SLC12A2 (ENSSCUG00000017146) #9	CTXN3 (ENSSCUG00000017137) #10	PRRC1 (ENSSCUG00000017131) #11	MEGF10 (ENSSCUG00000017126) #12	ENSSCUG00000017123	MARCHF3 (ENSSCUG00000017121) #14	LMNB1 (ENSSCUG00000017119) #15	TEX43 (ENSSCUG00000017118) #16	PHAX (ENSSCUG00000017117) #17	ALDH7A1 (ENSSCUG00000017106) #18	GRAMD2B (ENSSCUG00000017097) #19	ENSSCUG00000017094	ZNF608 (ENSSCUG00000017071) #20	CSNK1G3 (ENSSCUG00000017038) #21	CEP120 (ENSSCUG00000017034) #22	PRDM6 (ENSSCUG00000017030) #23	PPIC (ENSSCUG00000017027) #24	SNX24 (ENSSCUG00000017026) #25	SNX2 (ENSSCUG00000017019) #26	SNCAIP (ENSSCUG00000017013) #27	ENSSCUG00000017010 #28	ENSSCUG00000017009 #29	LOX (ENSSCUG00000017007) #30	SRFBP1 (ENSSCUG00000017006) #31
Australian saltwater crocodile	MODERN SPECIES	67	PAX5 (ENSCPRG00005012238)	ENSCPRG00005012215	ZCCHC7 (ENSCPRG00005012210)	ENSCPRG00005012191	GRHPR (ENSCPRG00005012185)	ZBTB5 (ENSCPRG00005012181)	POLR1E (ENSCPRG00005012160)	FBXO10 (ENSCPRG00005012151)	ENSCPRG00005012147	DCAF10 (ENSCPRG00005012128)	ENSCPRG00005012124	TRMT10B (ENSCPRG00005012111)	FRMPD1 (ENSCPRG00005012094)	TOMM5 (ENSCPRG00005012084)	IGFBPL1 (ENSCPRG00005012076)	CEP120 (ENSCPRG00005012069) #22	PRDM6 (ENSCPRG00005012027) #23	PPIC (ENSCPRG00005012019) #24	SNX24 (ENSCPRG00005012013) #25	SNX2 (ENSCPRG00005012003) #26	SNCAIP (ENSCPRG00005011992) #27	ENSCPRG00005011990 #28	ENSCPRG00005011982 #29	LOX (ENSCPRG00005011948) #30	SRFBP1 (ENSCPRG00005011936) #31	ENSCPRG00005011916	ZNF608 (ENSCPRG00005011899) #20	GRAMD2B (ENSCPRG00005011882) #19	ALDH7A1 (ENSCPRG00005011875) #18	PHAX (ENSCPRG00005011866) #17	ENSCPRG00005011864
Cryptodira	ANCESTRAL SPECIES	9	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867
Emydidae	ANCESTRAL SPECIES	20	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31
painted turtle	MODERN SPECIES	800														ZNF608 (ENSCPBG00000013584) #20	CSNK1G3 (ENSCPBG00000013581) #21	CEP120 (ENSCPBG00000013575) #22	PRDM6 (ENSCPBG00000013566) #23	PPIC (ENSCPBG00000013564) #24	ENSCPBG00000013562	SNX24 (ENSCPBG00000013559) #25	SNX2 (ENSCPBG00000013551) #26	SNCAIP (ENSCPBG00000013547) #27	ENSCPBG00000013545	ENSCPBG00000013538 #28	LOX (ENSCPBG00000013534) #30	ENSCPBG00000013472	PRR16 (ENSCPBG00000013468) #34
Three-toed box turtle	MODERN SPECIES	50	ENSTMTG00000016930 #8	ENSTMTG00000016961 #8	SLC12A2 (ENSTMTG00000017278) #9	CTXN3 (ENSTMTG00000020877) #10	PRRC1 (ENSTMTG00000020885) #11	MEGF10 (ENSTMTG00000020898) #12	C5orf63 (ENSTMTG00000020928) #13	MARCHF3 (ENSTMTG00000020934) #14	LMNB1 (ENSTMTG00000020940) #15	TEX43 (ENSTMTG00000020952) #16	PHAX (ENSTMTG00000020963) #17	ALDH7A1 (ENSTMTG00000020972) #18	GRAMD2B (ENSTMTG00000020992) #19	ZNF608 (ENSTMTG00000021021) #20	CSNK1G3 (ENSTMTG00000021027) #21	CEP120 (ENSTMTG00000021055) #22	PRDM6 (ENSTMTG00000021178) #23	PPIC (ENSTMTG00000021187) #24	SNX24 (ENSTMTG00000021193) #25	SNX2 (ENSTMTG00000021205) #26	SNCAIP (ENSTMTG00000021216) #27	ENSTMTG00000021224 #28	ENSTMTG00000021232 #29	LOX (ENSTMTG00000021241) #30	SRFBP1 (ENSTMTG00000021251) #31
Testudinidae	ANCESTRAL SPECIES	15	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00390000001189.b.f
Abingdon island giant tortoise	MODERN SPECIES	1551													ENSCABG00000020178	ZNF608 (ENSCABG00000020180) #20	CSNK1G3 (ENSCABG00000020190) #21	CEP120 (ENSCABG00000020213) #22	PRDM6 (ENSCABG00000020312) #23	PPIC (ENSCABG00000020313) #24	SNX24 (ENSCABG00000020314) #25	SNX2 (ENSCABG00000020316) #26	ENSCABG00000020319 #27	ENSCABG00000020321 #28	ENSCABG00000020322 #29	LOX (ENSCABG00000020323) #30	SRFBP1 (ENSCABG00000020324) #31	YIPF4 (ENSCABG00000020325)	ENSCABG00000020328	ENSCABG00000020330	ENSCABG00000020331	ENSCABG00000020332
Goode s thornscrub tortoise	MODERN SPECIES	20	ENSGEVG00005004035 #8	SLC12A2 (ENSGEVG00005004873) #9	CTXN3 (ENSGEVG00005007745) #10	PRRC1 (ENSGEVG00005007771) #11	MEGF10 (ENSGEVG00005007808) #12	C5orf63 (ENSGEVG00005007907) #13	MARCHF3 (ENSGEVG00005007931) #14	LMNB1 (ENSGEVG00005007963) #15	TEX43 (ENSGEVG00005008005) #16	PHAX (ENSGEVG00005008064) #17	ALDH7A1 (ENSGEVG00005008089) #18	ENSGEVG00005008170	GRAMD2B (ENSGEVG00005008205) #19	ZNF608 (ENSGEVG00005008344) #20	CSNK1G3 (ENSGEVG00005008459) #21	CEP120 (ENSGEVG00005008549) #22	PRDM6 (ENSGEVG00005009008) #23	PPIC (ENSGEVG00005009084) #24	SNX24 (ENSGEVG00005009133) #25	SNX2 (ENSGEVG00005009245) #26	ENSGEVG00005009293 #27	ENSGEVG00005009355 #28	ENSGEVG00005009399 #29	LOX (ENSGEVG00005009459) #30	SRFBP1 (ENSGEVG00005009571) #31	PRR16 (ENSGEVG00005009592) #34	ENSGEVG00005009622	HSD17B4 (ENSGEVG00005009648) #37	TNFAIP8 (ENSGEVG00005009719)	DMXL1 (ENSGEVG00005009753)	DTWD2 (ENSGEVG00005009969)
Chinese turtle	MODERN SPECIES	1607		GPN1 (ENSPSIG00000015295)	ENSPSIG00000014581	SLC30A3 (ENSPSIG00000014488)	PRRC1 (ENSPSIG00000014481) #11	MEGF10 (ENSPSIG00000013171) #12	C5orf63 (ENSPSIG00000013157) #13	MARCHF3 (ENSPSIG00000012766) #14	LMNB1 (ENSPSIG00000011710) #15	ENSPSIG00000011691 #16	PHAX (ENSPSIG00000011345) #17	ALDH7A1 (ENSPSIG00000008652) #18	GRAMD2B (ENSPSIG00000006243) #19	ZNF608 (ENSPSIG00000015457) #20	CSNK1G3 (ENSPSIG00000014585) #21	CEP120 (ENSPSIG00000014102) #22
Anura	ANCESTRAL SPECIES	9	ENSGT00940000159700 #7	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206 #14	ENSGT00940000157199 #15	ENSGT00390000006935 #16	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000164652	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Frog	MODERN SPECIES		prrc1 (ENSXETG00000027410) #11	megf10 (ENSXETG00000034085) #12	marchf3 (ENSXETG00000005160) #14	C5orf63 (ENSXETG00000035040) #13	lmnb1 (ENSXETG00000005162) #15	tex43 (ENSXETG00000038060)	phax (ENSXETG00000005189) #17	aldh7a1 (ENSXETG00000005191) #18	ENSXETG00000045783	gramd2b (ENSXETG00000005193) #19	ENSXETG00000042936	znf608 (ENSXETG00000010257) #20	ENSXETG00000048834	ENSXETG00000049422	csnk1g3 (ENSXETG00000010259) #21	cep120 (ENSXETG00000010260) #22	prdm6 (ENSXETG00000010261) #23	ppic (ENSXETG00000011444) #24	ENSXETG00000039508	snx24 (ENSXETG00000040071) #26	sncaip (ENSXETG00000027392) #27	znf474 (ENSXETG00000039659) #28	lox (ENSXETG00000004679) #30	srfbp1 (ENSXETG00000004681) #31	ENSXETG00000036407	prr16 (ENSXETG00000040006) #34	ENSXETG00000047428	hsd17b4 (ENSXETG00000017534) #37	tnfaip8 (ENSXETG00000017562)	dmxl1 (ENSXETG00000017568)	dtwd2 (ENSXETG00000017583)
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000014037	ENSLLEG00000013889	C5orf63 (ENSLLEG00000013845) #13	MARCHF3 (ENSLLEG00000013803) #14	ENSLLEG00000013789	LMNB1 (ENSLLEG00000013594) #15	TEX43 (ENSLLEG00000013503) #16	ENSLLEG00000013476	ENSLLEG00000013456	PHAX (ENSLLEG00000013411) #17	ALDH7A1 (ENSLLEG00000013112) #18	GRAMD2B (ENSLLEG00000012899) #19	ENSLLEG00000012876	ZNF608 (ENSLLEG00000012797) #20	ENSLLEG00000012413 #21	CEP120 (ENSLLEG00000011323) #22	PRDM6 (ENSLLEG00000011195) #23	PPIC (ENSLLEG00000011148) #24	SNX24 (ENSLLEG00000010901) #25	SNX2 (ENSLLEG00000010173) #26	ENSLLEG00000010095	SNCAIP (ENSLLEG00000009652) #27	ENSLLEG00000009599	ENSLLEG00000009578 #28	ZNF474 (ENSLLEG00000009527)	LOX (ENSLLEG00000009465) #30	SRFBP1 (ENSLLEG00000009380) #31	ENSLLEG00000009347	PRR16 (ENSLLEG00000009316) #34	ENSLLEG00000009291	HSD17B4 (ENSLLEG00000008394) #37
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	2166																ENSLACG00000008864 #22	ENSLACG00000007723	PRDM6 (ENSLACG00000003287) #23	PPIC (ENSLACG00000001486) #24
Coelacanth	MODERN SPECIES	3886																CEP120 (ENSLACG00000001746) #22
Actinopterygii	ANCESTRAL SPECIES	11	ENSGT00940000159700 #7	ENSGT00940000161073	ENSGT00950000183158.E #8	ENSGT00940000155742 #9	ENSGT00940000154412.A #10	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00390000014940 #13	ENSGT00940000159206.a #14	ENSGT00940000157199 #15	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00530000064208.b #28	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565	ENSGT00390000001500
Neopterygii	ANCESTRAL SPECIES	16	ENSGT00390000003837 #11	ENSGT00940000157703 #12	ENSGT00940000175893	ENSGT00390000014940 #13	ENSGT00940000159206.a #14	ENSGT00940000157199 #15	ENSGT00390000018319.a.a.b	ENSGT00390000016136	ENSGT00940000159103	ENSGT00950000183113.b.a	ENSGT00390000011084 #17	ENSGT00940000154938 #18	ENSGT00940000156980 #19	ENSGT00390000008748.a #20	ENSGT00940000160646 #21	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00390000001280.b #25	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00530000064208.a #29	ENSGT00940000154779.a.b.a #30	ENSGT00390000006478 #31	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000003488.a.b.b	ENSGT00390000000096.a	ENSGT00390000006867	ENSGT00940000156565
Osteoglossocephalai	ANCESTRAL SPECIES	11											ENSGT00530000065159	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00940000158463	ENSGT00940000158626	ENSGT00940000153988.B
Clupeocephala	ANCESTRAL SPECIES	4	ENSGT00940000156223	ENSGT00640000091617	ENSGT00390000004984.a	ENSGT00940000154586	ENSGT00940000155754	ENSGT00940000155553	ENSGT00940000161183	ENSGT00940000156399	ENSGT00730000110872.a.sb	ENSGT00530000065159	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00940000158463	ENSGT00940000158626	ENSGT00940000153988.B
Euteleosteomorpha	ANCESTRAL SPECIES	176	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00950000182925.A	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT00910000144273	ENSGT00940000159527	ENSGT00550000074919	ENSGT00940000154702.b	ENSGT00940000156044	ENSGT00390000002024
Protacanthopterygii	ANCESTRAL SPECIES	140	ENSGT00390000003878	ENSGT00390000012859	ENSGT00950000182925.A	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000004950.b	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00940000173416	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27
Salmoninae	ANCESTRAL SPECIES	200	ENSGT01030000234539.b.b.a.i.n	ENSGT00940000177802	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00950000182925.A.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786.b #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000157089.B.j	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k
Huchen	MODERN SPECIES	1046									pik3r1 (ENSHHUG00000046654)	zgc:101664 (ENSHHUG00000046661)	ENSHHUG00000046662	ENSHHUG00000046718	nudt12 (ENSHHUG00000046719)	SLC12A2 (ENSHHUG00000046727) #9	ZNF608 (ENSHHUG00000047329) #20	CEP120 (ENSHHUG00000047331) #22	PRDM6 (ENSHHUG00000047374) #23	ENSHHUG00000047381	ENSHHUG00000047382 #26
Salmoninae_a	ANCESTRAL SPECIES	47	ENSGT01030000234539.b.b.a.i.n	ENSGT00940000177802	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00950000182925.A.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786.b #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000177848.b	ENSGT00940000157089.B.j	ENSGT00940000158287.g	ENSGT00390000014757.x
Salmo	ANCESTRAL SPECIES	30	ENSGT00950000183125.b.a.a.a.a.b.c	ENSGT01030000234539.b.b.a.i.n	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00950000182925.A.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786.b #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000177848.b	ENSGT00940000157089.B.j	ENSGT00940000158287.g	ENSGT00390000014757.x
Atlantic salmon	MODERN SPECIES	18	ENSSSAG00000045777	zmiz2 (ENSSSAG00000046445)	ENSSSAG00000049976	ENSSSAG00000088544	tti2 (ENSSSAG00000050113)	ENSSSAG00000050139	spinb (ENSSSAG00000050158)	ENSSSAG00000050340	lrrc2 (ENSSSAG00000054744)	ENSSSAG00000054808	ENSSSAG00000108735	ENSSSAG00000059195	ENSSSAG00000059232	ENSSSAG00000059447 #9	ZNF608 (ENSSSAG00000065110) #20	CEP120 (ENSSSAG00000065138) #22	PRDM6 (ENSSSAG00000065176) #23	PPIC (ENSSSAG00000065198) #24	snx2 (ENSSSAG00000065248) #26	sncaip (ENSSSAG00000065341) #27	ENSSSAG00000065346	ENSSSAG00000088671	ENSSSAG00000109713	ENSSSAG00000065358	cmya5 (ENSSSAG00000121490)	ENSSSAG00000090027	ENSSSAG00000120104	tent2 (ENSSSAG00000105442)	ENSSSAG00000091228	homer1 (ENSSSAG00000065561)	otpb (ENSSSAG00000065781)
River trout	MODERN SPECIES	21	ZMIZ2 (ENSSTUG00000032989)	ENSSTUG00000032967	SLC18A1 (ENSSTUG00000032939)	TTI2 (ENSSTUG00000032934)	mak16 (ENSSTUG00000032823)	ENSSTUG00000032781	MFSD14B (ENSSTUG00000032434)	ENSSTUG00000032322	zgc:101664 (ENSSTUG00000032308)	pik3r1 (ENSSTUG00000032112)	ENSSTUG00000032042	ENSSTUG00000031997	nudt12 (ENSSTUG00000031985)	SLC12A2 (ENSSTUG00000020425) #9	ZNF608 (ENSSTUG00000019950) #20	CEP120 (ENSSTUG00000019828) #22	PRDM6 (ENSSTUG00000019801) #23	PPIC (ENSSTUG00000019755) #24	SNX2 (ENSSTUG00000019638) #26	sncaip (ENSSTUG00000019613) #27	ankrd34bb (ENSSTUG00000019564)	ENSSTUG00000019545	ENSSTUG00000019415	cmya5 (ENSSTUG00000019292)	tent2 (ENSSTUG00000019077)	homer1b (ENSSTUG00000019033)	ENSSTUG00000019023	otpb (ENSSTUG00000019011)	ENSSTUG00000018997	MAPK8IP1 (ENSSTUG00000018959)	lrp4 (ENSSTUG00000018050)
Oncorhynchus	ANCESTRAL SPECIES		ENSGT01030000234539.b.b.a.i.n	ENSGT00940000177802	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00950000182925.A.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000177848.b	ENSGT00940000157089.B.j	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT01030000234539.b.b.a.i.n	ENSGT00940000177802	ENSGT00940000159352	ENSGT00390000003878	ENSGT00390000012859	ENSGT00950000182925.A.a	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00390000012355.A.a.a.a.a	ENSGT00940000155776.b	ENSGT00940000155831.bb	ENSGT00940000159696	ENSGT00940000156640	ENSGT00940000156354.o	ENSGT00940000159952.a.a	ENSGT00940000177848.b	ENSGT00940000157089.B.j	ENSGT00940000158287.g	ENSGT00390000014757.x	ENSGT00810000125439.A.k
Coho salmon	MODERN SPECIES	22	ENSOKIG00005006503	ZMIZ2 (ENSOKIG00005007212)	SLC18A1 (ENSOKIG00005007412)	TTI2 (ENSOKIG00005007481)	mak16 (ENSOKIG00005007495)	ENSOKIG00005007535	MFSD14B (ENSOKIG00005007580)	ENSOKIG00005008397	PIK3R1 (ENSOKIG00005008470)	zgc:101664 (ENSOKIG00005008800)	ENSOKIG00005008814	ENSOKIG00005008864	nudt12 (ENSOKIG00005008904)	ENSOKIG00005009467 #9	ZNF608 (ENSOKIG00005019661) #20	CEP120 (ENSOKIG00005019683) #22	PRDM6 (ENSOKIG00005019721) #23	SNX2 (ENSOKIG00005019761) #26	sncaip (ENSOKIG00005019875) #27	ENSOKIG00005019886	ankrd34bb (ENSOKIG00005020096)	ENSOKIG00005020116	ENSOKIG00005020179	cmya5 (ENSOKIG00005020228)	tent2 (ENSOKIG00005020289)	homer1b (ENSOKIG00005020851)	ENSOKIG00005000007	otpb (ENSOKIG00005000029)	ENSOKIG00005000054	MAPK8IP1 (ENSOKIG00005000068)	lrp4 (ENSOKIG00005000443)
Chinook salmon	MODERN SPECIES	28	ENSOTSG00005002057	SLC18A1 (ENSOTSG00005002059)	ENSOTSG00005002065	mak16 (ENSOTSG00005002067)	ENSOTSG00005002072	MFSD14B (ENSOTSG00005002144)	ENSOTSG00005007905	pik3r1 (ENSOTSG00005007908)	zgc:101664 (ENSOTSG00005007917)	ENSOTSG00005007920	ENSOTSG00005007924	nudt12 (ENSOTSG00005007928)	SLC12A2 (ENSOTSG00005007958) #9	ENSOTSG00005025970	ZNF608 (ENSOTSG00005025973) #20	CEP120 (ENSOTSG00005025977) #22	PRDM6 (ENSOTSG00005026012) #23	SNX2 (ENSOTSG00005026019) #26	sncaip (ENSOTSG00005026032) #27	ankrd34bb (ENSOTSG00005026039)	ENSOTSG00005026040	ENSOTSG00005026041	ENSOTSG00005026042	cmya5 (ENSOTSG00005026044)	tent2 (ENSOTSG00005026045)	homer1b (ENSOTSG00005026119)	otpb (ENSOTSG00005026123)	ENSOTSG00005026124	lrp4 (ENSOTSG00005026127)	ENSOTSG00005026254	NELL1 (ENSOTSG00005026432)
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000021999	ENSOMYG00000022029	ENSOMYG00000022045	ENSOMYG00000022058	ENSOMYG00000022084	ENSOMYG00000022224	ENSOMYG00000022686	ENSOMYG00000022700	ENSOMYG00000022772	ENSOMYG00000022804	ENSOMYG00000063412	ENSOMYG00000026131 #9	ENSOMYG00000068711	ZNF608 (ENSOMYG00000042347) #20	ENSOMYG00000059923	ENSOMYG00000042377 #22	PRDM6 (ENSOMYG00000042436) #23	ENSOMYG00000042453 #26	ENSOMYG00000042474 #27	ENSOMYG00000029686	ENSOMYG00000001222	ENSOMYG00000001277	ENSOMYG00000001330	ENSOMYG00000001383	cmya5 (ENSOMYG00000059165)	tent2 (ENSOMYG00000001690)	ENSOMYG00000065004	homer1b (ENSOMYG00000001923)	ENSOMYG00000049056	ENSOMYG00000002004	otpb (ENSOMYG00000002018)
Northern pike	MODERN SPECIES	12	mak16 (ENSELUG00000008291)	spinb (ENSELUG00000008104)	ENSELUG00000008053	ENSELUG00000007986	srp19 (ENSELUG00000032438)	pik3r1 (ENSELUG00000007903)	zgc:101664 (ENSELUG00000007852)	ENSELUG00000007841	ENSELUG00000034373	ENSELUG00000031412	nudt12 (ENSELUG00000001453)	SLC12A2 (ENSELUG00000007777) #9	ENSELUG00000007693	GRAMD2B (ENSELUG00000007672) #19	ZNF608 (ENSELUG00000007611) #20	CEP120 (ENSELUG00000007563) #22	PRDM6 (ENSELUG00000007506) #23	PPIC (ENSELUG00000007473) #24	SNX2 (ENSELUG00000007419) #26	sncaip (ENSELUG00000007340) #27	erap1b (ENSELUG00000007307)	gtf2h2 (ENSELUG00000007247)	oclnb (ENSELUG00000007170)	marveld2b (ENSELUG00000007149)	zgc:86811 (ENSELUG00000007114)	rad17 (ENSELUG00000007100)	ccdc125 (ENSELUG00000000242)	fam151b (ENSELUG00000032047)	ankrd34bb (ENSELUG00000006938)	dhfr (ENSELUG00000006861)	ENSELUG00000006825
Acanthomorphata	ANCESTRAL SPECIES	138	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000173416	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A
Euacanthomorphacea	ANCESTRAL SPECIES	42	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000173416	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000173416	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00770000121806.b	ENSGT00390000003213	ENSGT00940000166999.A	ENSGT01100000263483.D.d.a.a.a.a	ENSGT01100000263483.D.d.a.b.b
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00400000024875.c.a.a.b.b.b	ENSGT00400000024875.c.a.a.b.b.a	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00400000024875.c.a.a.b.b.b	ENSGT00400000024875.c.a.a.b.b.a	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b
Tetraodontidae	ANCESTRAL SPECIES	24	ENSGT00940000156340.a.c	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.a.a	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000164100.A.c.a.d.b.a	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306
Fugu	MODERN SPECIES	13	tas2r1 (ENSTRUG00000009338)	MMP11 (ENSTRUG00000009346)	tor2a (ENSTRUG00000009608)	PTRH1 (ENSTRUG00000019801)	ENSTRUG00000023242	ENSTRUG00000009715	FAM163B (ENSTRUG00000027729)	ADAMTSL2 (ENSTRUG00000009723)	mymk (ENSTRUG00000009850)	slc2a8 (ENSTRUG00000009874)	HIRA (ENSTRUG00000010121)	ENSTRUG00000025472	nudt12 (ENSTRUG00000010693)	GRAMD2B (ENSTRUG00000011252) #19	ZNF608 (ENSTRUG00000011272) #20	CEP120 (ENSTRUG00000011326) #22	PRDM6 (ENSTRUG00000011582) #23	ENSTRUG00000025882	ENSTRUG00000020623	PPIC (ENSTRUG00000020078) #24	SNX2 (ENSTRUG00000011833) #26	sncaip (ENSTRUG00000012077) #27	ENSTRUG00000012234	zgc:158343 (ENSTRUG00000020922)	ENSTRUG00000033346	ENSTRUG00000012755	atad1a (ENSTRUG00000012810)	GALNT9 (ENSTRUG00000012871)	FBRSL1 (ENSTRUG00000012985)	chfr (ENSTRUG00000013079)	golga3 (ENSTRUG00000013241)
Tetraodon	MODERN SPECIES	26	ENSTNIG00000004404	ENSTNIG00000001197	myh11a (ENSTNIG00000004405)	ENSTNIG00000004406	ENSTNIG00000004407	SHISA2 (ENSTNIG00000000624)	EIF4A1 (ENSTNIG00000004408)	ENSTNIG00000004413	ENSTNIG00000004416	gria2b (ENSTNIG00000004419)	ENSTNIG00000004425	ENSTNIG00000004426	ENSTNIG00000012931	ENSTNIG00000004444	ZNF608 (ENSTNIG00000004448) #20	CEP120 (ENSTNIG00000004449) #22	PRDM6 (ENSTNIG00000004450) #23	frem2b (ENSTNIG00000004462)	ENSTNIG00000004465	ENSTNIG00000004472	ENSTNIG00000004473	lmna (ENSTNIG00000004474)	ENSTNIG00000004475	ENSTNIG00000004477	tent4b (ENSTNIG00000004479)	ENSTNIG00000000628	ENSTNIG00000004480	esd (ENSTNIG00000004482)	ENSTNIG00000000864	ift74 (ENSTNIG00000004490)	ENSTNIG00000003839
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00400000024875.c.a.a.b.b.b	ENSGT00400000024875.c.a.a.b.b.a	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b
Ballan wrasse	MODERN SPECIES	498											FRMD3 (ENSLBEG00000006174)	ENSLBEG00000006316	ENSLBEG00000006334	GRAMD2B (ENSLBEG00000006368) #19	ZNF608 (ENSLBEG00000006435) #20	CEP120 (ENSLBEG00000006500) #22	PRDM6 (ENSLBEG00000006579) #23	ENSLBEG00000006614	PPIC (ENSLBEG00000006631) #24
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00400000024875.c.a.a.b.b.a	ENSGT00400000024875.c.a.a.b.a.a	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00940000179411	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709	ENSGT00400000022306
Gilthead seabream	MODERN SPECIES	19	ENSSAUG00010019480	ENSSAUG00010019477	ENSSAUG00010019474	ENSSAUG00010019472	FAM163B (ENSSAUG00010019469)	ADAMTSL2 (ENSSAUG00010019458)	mymk (ENSSAUG00010019449)	slc2a8 (ENSSAUG00010019435)	HIRA (ENSSAUG00010018570)	ENSSAUG00010018566	nudt12 (ENSSAUG00010018564)	SLC12A2 (ENSSAUG00010007937) #9	ENSSAUG00010007828	GRAMD2B (ENSSAUG00010007827) #19	ZNF608 (ENSSAUG00010007825) #20	CEP120 (ENSSAUG00010007821) #22	ENSSAUG00010007819	ENSSAUG00010007817	ENSSAUG00010007816	ENSSAUG00010007815	PRDM6 (ENSSAUG00010007813) #23	PPIC (ENSSAUG00010007810) #24	SNX2 (ENSSAUG00010006691) #26	ENSSAUG00010006677	sncaip (ENSSAUG00010006674) #27	ENSSAUG00010006665	ENSSAUG00010006660 ##30	ENSSAUG00010006397	zgc:158343 (ENSSAUG00010006393)	ENSSAUG00010006392	ENSSAUG00010006391
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	9	ENSGT00390000004247	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00940000179411	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00940000166999.A	ENSGT00950000183200.B	ENSGT01010000222287.B.a.a.a.b	ENSGT00550000074823.b.b	ENSGT00940000156599	ENSGT00940000160709
European seabass	MODERN SPECIES	13	ENSDLAG00005011936	ENSDLAG00005011943	ENSDLAG00005032139	ENSDLAG00005029705	FAM163B (ENSDLAG00005011950)	ENSDLAG00005011961	mymk (ENSDLAG00005012015)	ENSDLAG00005012019	slc2a8 (ENSDLAG00005012030)	ENSDLAG00005012067	ENSDLAG00005031920	ENSDLAG00005013058 #9	ENSDLAG00005016341	GRAMD2B (ENSDLAG00005016351) #19	ZNF608 (ENSDLAG00005016383) #20	CEP120 (ENSDLAG00005016408) #22	PRDM6 (ENSDLAG00005016707) #23	ENSDLAG00005033815	ENSDLAG00005016735	PPIC (ENSDLAG00005034316) #24	SNX2 (ENSDLAG00005016765) #26	ENSDLAG00005017130	ENSDLAG00005030276 #27	ENSDLAG00005017193 ##30	ENSDLAG00005017213	ENSDLAG00005017376	ENSDLAG00005033988	ENSDLAG00005030975	piwil2 (ENSDLAG00005017472)	ENSDLAG00005030164	ENSDLAG00005019291
Large yellow croaker	MODERN SPECIES	2	sh2d3cb (ENSLCRG00005019600)	tor2a (ENSLCRG00005019595)	ptrh1 (ENSLCRG00005019591)	ENSLCRG00005019588	ENSLCRG00005019582	FAM163B (ENSLCRG00005019580)	ADAMTSL2 (ENSLCRG00005019570)	mymk (ENSLCRG00005019562)	slc2a8 (ENSLCRG00005019557)	HIRA (ENSLCRG00005019522)	nudt12 (ENSLCRG00005019521)	SLC12A2 (ENSLCRG00005006391) #9	ENSLCRG00005006230	GRAMD2B (ENSLCRG00005006227) #19	ZNF608 (ENSLCRG00005006226) #20	CEP120 (ENSLCRG00005006186) #22	ENSLCRG00005006182	ENSLCRG00005006180	PRDM6 (ENSLCRG00005006178) #23	PPIC (ENSLCRG00005006176) #24	SNX2 (ENSLCRG00005004430) #26	ENSLCRG00005004398	sncaip (ENSLCRG00005004396) #27	ENSLCRG00005004395 ##30	ENSLCRG00005004319	ENSLCRG00005004317	hs3st1l2 (ENSLCRG00005004316)	h2az2b (ENSLCRG00005004300)	purbb (ENSLCRG00005004297)	ENSLCRG00005004294	il1b (ENSLCRG00005004292)
Perciformes	ANCESTRAL SPECIES	6	ENSGT00400000024875.c.a.a.b.b.a	ENSGT00400000024875.c.a.a.b.b.b	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT01100000263483.D.d.a.a.a.a	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159
Cottioidei	ANCESTRAL SPECIES	27	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b.a.a	ENSGT00400000024875.c.a.a.b.b.b	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000177613	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT00940000164100.A.c.b.b	ENSGT00950000182960.a.b	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b
Lumpfish	MODERN SPECIES	24	ENSCLMG00005008131	ENSCLMG00005008130	ENSCLMG00005008128	FAM163B (ENSCLMG00005008126)	ADAMTSL2 (ENSCLMG00005008095)	mymk (ENSCLMG00005008094)	ENSCLMG00005008093	slc2a8 (ENSCLMG00005008091)	HIRA (ENSCLMG00005006939)	ENSCLMG00005006929	ENSCLMG00005006928	nudt12 (ENSCLMG00005006924)	SLC12A2 (ENSCLMG00005006919) #9	GRAMD2B (ENSCLMG00005006914) #19	ZNF608 (ENSCLMG00005006910) #20	CEP120 (ENSCLMG00005006280) #22	ENSCLMG00005006268	ENSCLMG00005006267	PRDM6 (ENSCLMG00005006265) #23	PPIC (ENSCLMG00005006204) #24	ENSCLMG00005006150	ENSCLMG00005006147	SNX2 (ENSCLMG00005004349) #26	ENSCLMG00005004243	sncaip (ENSCLMG00005004240) #27	ENSCLMG00005010484	ENSCLMG00005010473 ##30	ENSCLMG00005010461	ENSCLMG00005010455	ENSCLMG00005010454	ENSCLMG00005010452
Stickleback	MODERN SPECIES	217													ENSGACG00000013520	ENSGACG00000013519	ZNF608 (ENSGACG00000013512) #20	CEP120 (ENSGACG00000013503) #22
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00400000024875.c.a.a.b.b.a	ENSGT00400000024875.c.a.a.b.a.a	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT01050000244843.c.a.b.a.a.a.b.b	ENSGT01100000263582	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213
Channel bull blenny	MODERN SPECIES	23	slc25a25a (ENSCGOG00000009767)	EEIG1 (ENSCGOG00000010265)	ENSCGOG00000010297	ENSCGOG00000010300	ENSCGOG00000010303	FAM163B (ENSCGOG00000010304)	ADAMTSL2 (ENSCGOG00000010306)	mymk (ENSCGOG00000010358)	slc2a8 (ENSCGOG00000010362)	HIRA (ENSCGOG00000010392)	ENSCGOG00000011025	nudt12 (ENSCGOG00000011031)	SLC12A2 (ENSCGOG00000011231) #9	ENSCGOG00000018534	ZNF608 (ENSCGOG00000018537) #20	CEP120 (ENSCGOG00000018546) #22	PRDM6 (ENSCGOG00000018591) #23	ENSCGOG00000018593	ENSCGOG00000018595	PPIC (ENSCGOG00000018597) #24	SNX2 (ENSCGOG00000018607) #26	ENSCGOG00000018852	sncaip (ENSCGOG00000018853) #27	ENSCGOG00000018855	ENSCGOG00000018858	ENSCGOG00000018859 ##30	ENSCGOG00000018864	ENSCGOG00000018868	zgc:158343 (ENSCGOG00000018871)	ENSCGOG00000018874	ENSCGOG00000018877
Pike perch	MODERN SPECIES	2	ADAMTSL2 (ENSSLUG00000015376)	mymk (ENSSLUG00000015364)	ENSSLUG00000015354	slc2a8 (ENSSLUG00000015344)	HIRA (ENSSLUG00000013734)	ENSSLUG00000013654	ENSSLUG00000013648	ENSSLUG00000013637	ENSSLUG00000013631	ENSSLUG00000013621	nudt12 (ENSSLUG00000013616)	SLC12A2 (ENSSLUG00000012698) #9	ENSSLUG00000012621	GRAMD2B (ENSSLUG00000012613) #19	ZNF608 (ENSSLUG00000012577) #20	CEP120 (ENSSLUG00000012554) #22	ENSSLUG00000012546	ENSSLUG00000012543	ENSSLUG00000012541	ENSSLUG00000012535	PRDM6 (ENSSLUG00000012529) #23	PPIC (ENSSLUG00000012520) #24	SNX2 (ENSSLUG00000012441) #26	ENSSLUG00000012419	sncaip (ENSSLUG00000012388) #27	ENSSLUG00000012372	ENSSLUG00000012348	ENSSLUG00000012339	ENSSLUG00000012336 ##30	ENSSLUG00000012213	zgc:158343 (ENSSLUG00000012194)
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00400000024875.c.a.a.b.b.a	ENSGT00400000024875.c.a.a.b.a.a	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT01100000263483.D.c.b.b.a	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00770000121806.b	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b.b.b	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT01100000263483.D.c.b.b.a	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00770000121806.b	ENSGT00940000166999.A	ENSGT00940000164100.A.c.a.d.a.a.b	ENSGT01100000263483.D.d.a.b.a.a.a.a.b	ENSGT00950000182960.a.b
Zig-zag eel	MODERN SPECIES	23	ENSMAMG00000017437	ENSMAMG00000017449	ENSMAMG00000017458	FAM163B (ENSMAMG00000017468)	ENSMAMG00000017486	mymk (ENSMAMG00000017523)	ENSMAMG00000017572	slc2a8 (ENSMAMG00000017543)	ENSMAMG00000017589	ENSMAMG00000017635	ENSMAMG00000017649	ENSMAMG00000017715 #9	ENSMAMG00000024906	ENSMAMG00000017779 #19	ZNF608 (ENSMAMG00000017787) #20	CEP120 (ENSMAMG00000017803) #22	PRDM6 (ENSMAMG00000017819) #23	ENSMAMG00000026866	ENSMAMG00000026097	ENSMAMG00000017874	PPIC (ENSMAMG00000026514) #24	SNX2 (ENSMAMG00000017940) #26	ENSMAMG00000017950	ENSMAMG00000017956 #27	ENSMAMG00000017964 ##30	ENSMAMG00000017985	ENSMAMG00000018024	ENSMAMG00000027209	ENSMAMG00000018048	ENSMAMG00000026762	ENSMAMG00000028077
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b.b.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT01100000263483.D.c.b.b.a	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00770000121806.b	ENSGT00940000166999.A	ENSGT00940000164100.A.c.a.d.a.a.b	ENSGT01100000263483.D.d.a.b.a.a.a.a.b	ENSGT00940000155553.e.b
Climbing perch	MODERN SPECIES	22	ENSATEG00000010228	ENSATEG00000028541	ENSATEG00000026173	FAM163B (ENSATEG00000010289)	ENSATEG00000010307	mymk (ENSATEG00000010413)	ENSATEG00000010458	slc2a8 (ENSATEG00000010485)	ENSATEG00000010577	ENSATEG00000011153	ENSATEG00000011163	ENSATEG00000011178 #9	ENSATEG00000030200	GRAMD2B (ENSATEG00000028542) #19	ZNF608 (ENSATEG00000011251) #20	CEP120 (ENSATEG00000011274) #22	PRDM6 (ENSATEG00000011298) #23	ENSATEG00000011330	ENSATEG00000011336	ENSATEG00000011341	ENSATEG00000011352	PPIC (ENSATEG00000011359) #24	SNX2 (ENSATEG00000011429) #26	ENSATEG00000011454	ENSATEG00000011475 #27	ENSATEG00000011488 ##30	ENSATEG00000011515	ENSATEG00000011573	ENSATEG00000029136	ENSATEG00000011586	ENSATEG00000011594
Siamese fighting fish	MODERN SPECIES	20	ENSBSLG00000013420	ENSBSLG00000013428	FAM163B (ENSBSLG00000013438)	ADAMTSL2 (ENSBSLG00000013469)	mymk (ENSBSLG00000013745)	ENSBSLG00000013754	slc2a8 (ENSBSLG00000014059)	HIRA (ENSBSLG00000014145)	ENSBSLG00000014678	NUDT12 (ENSBSLG00000014747)	ENSBSLG00000014778	ENSBSLG00000014795 #9	ENSBSLG00000015953	GRAMD2B (ENSBSLG00000016602) #19	ZNF608 (ENSBSLG00000016653) #20	CEP120 (ENSBSLG00000016738) #22	PRDM6 (ENSBSLG00000016997) #23	ENSBSLG00000017019	ENSBSLG00000017042	ENSBSLG00000017057	PPIC (ENSBSLG00000017071) #24	ENSBSLG00000017127	SNX2 (ENSBSLG00000017193) #26	ENSBSLG00000017881	sncaip (ENSBSLG00000017899) #27	PPIC (ENSBSLG00000017923) #24	ENSBSLG00000017931	sncaip (ENSBSLG00000017983) #27	ENSBSLG00000017999 ##30	ENSBSLG00000018191	ENSBSLG00000018296
Carangaria	ANCESTRAL SPECIES	9	ENSGT00400000024875.c.a.a.b.b.a	ENSGT00400000024875.c.a.a.b.a.a	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT01100000263483.D.c.b.b.a	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00770000121806.b	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT00940000164100.A.c.a.d.a.a.b
Carangaria_A	ANCESTRAL SPECIES	140														ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22
Barramundi perch	MODERN SPECIES	47	ENSLCAG00010007267	slc2a8 (ENSLCAG00010007272)	HIRA (ENSLCAG00010007314)	ENSLCAG00010007530	nudt12 (ENSLCAG00010007542)	SLC12A2 (ENSLCAG00010007623) #9	ENSLCAG00010007944	ENSLCAG00010007945	ENSLCAG00010007950	ENSLCAG00010007952	ENSLCAG00010007954	ENSLCAG00010007956	ENSLCAG00010007962	GRAMD2B (ENSLCAG00010007966) #19	ZNF608 (ENSLCAG00010007977) #20	CEP120 (ENSLCAG00010007992) #22	nphp3 (ENSLCAG00010008052)	uba5 (ENSLCAG00010008144)	acad11 (ENSLCAG00010008341)	ackr4b (ENSLCAG00010008720)	u2surp (ENSLCAG00010008808)	pcolce2b (ENSLCAG00010009120)	trpc1 (ENSLCAG00010009131)	CHST2 (ENSLCAG00010009204)	SLC9A9 (ENSLCAG00010009206)	dipk2ab (ENSLCAG00010009218)	plod2 (ENSLCAG00010009358)	ENSLCAG00010010107	zic4 (ENSLCAG00010010115)	zic1 (ENSLCAG00010010119)	AGTR1 (ENSLCAG00010010122)
Seriola	ANCESTRAL SPECIES	204													ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22
Greater amberjack	MODERN SPECIES	312														GRAMD2B (ENSSDUG00000023635) #19	ZNF608 (ENSSDUG00000023636) #20	CEP120 (ENSSDUG00000023637) #22
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	MODERN SPECIES	2937																CEP120 (ENSSLDG00000002529) #22
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	MODERN SPECIES	2427																ENSSLDG00000012212 #22
Yellowtail amberjack	MODERN SPECIES	2099																ENSSLDG00000015182 #22
Pleuronectoidei	ANCESTRAL SPECIES	57									ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000173416	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT01100000263483.D.c.b.b.a	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00550000074618.b	ENSGT00530000065159	ENSGT00940000155553.e.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a
Turbot	MODERN SPECIES	21	sh2d3cb (ENSSMAG00000016469)	ENSSMAG00000024377	ptrh1 (ENSSMAG00000016747)	ENSSMAG00000028130	ENSSMAG00000016763	ENSSMAG00000034382	ENSSMAG00000030375	ENSSMAG00000013269	ENSSMAG00000013201	ENSSMAG00000013157	ENSSMAG00000013099	ENSSMAG00000013091	ENSSMAG00000013051 #9	GRAMD2B (ENSSMAG00000013019) #19	ZNF608 (ENSSMAG00000013003) #20	CEP120 (ENSSMAG00000012970) #22	PRDM6 (ENSSMAG00000025085) #23	ENSSMAG00000012958	PPIC (ENSSMAG00000027130) #24	ENSSMAG00000021639	ENSSMAG00000017145	SNX2 (ENSSMAG00000035363) #26	ENSSMAG00000034191	ENSSMAG00000017013 #27	ENSSMAG00000017032 ##30	ENSSMAG00000017039	ENSSMAG00000017128	ENSSMAG00000016994	ENSSMAG00000032892	ENSSMAG00000017003	ENSSMAG00000027844
Tongue sole	DUPLICATION
Tongue sole	MODERN SPECIES	398	FAM163B (ENSCSEG00000008998)	OGDH (ENSCSEG00000009011)	ZMIZ2 (ENSCSEG00000009050)	ENSCSEG00000009081	ENSCSEG00000009090	SLC18A1 (ENSCSEG00000009099)	ENSCSEG00000009118	ENSCSEG00000009126	slc2a8 (ENSCSEG00000009139)	HIRA (ENSCSEG00000009163)	ENSCSEG00000009203	nudt12 (ENSCSEG00000009231)	SLC12A2 (ENSCSEG00000009247) #9	GRAMD2B (ENSCSEG00000009279) #19	ZNF608 (ENSCSEG00000009292) #20	CEP120 (ENSCSEG00000009330) #22	PRDM6 (ENSCSEG00000009398) #23	PPIC (ENSCSEG00000009434) #24	SNX2 (ENSCSEG00000009634) #26	ENSCSEG00000009696	ENSCSEG00000009704	sncaip (ENSCSEG00000009716) #27	ENSCSEG00000009724 ##30	ENSCSEG00000009736	ENSCSEG00000009762	ENSCSEG00000009772	ENSCSEG00000009777	ACTB (ENSCSEG00000009782)	ENSCSEG00000009792	ENSCSEG00000009802	ENSCSEG00000009812
Tongue sole	MODERN SPECIES	80																CEP120 (ENSCSEG00000018339) #22
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00770000121806.b	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989
Ovalentaria_B	ANCESTRAL SPECIES	27	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b.a.a	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950	ENSGT00500000044989	ENSGT00950000182850.a.b.b.a
Cichlidae	ANCESTRAL SPECIES	6	ENSGT00400000024875.c.a.a.b.a.a.a.a	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT01010000224840	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b.w.b	ENSGT01100000263483.D.c.b.b.a	ENSGT00940000164100.A.c.a.d.a.b.b.w.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00770000121806.b	ENSGT00940000166999.A	ENSGT00940000161917.b	ENSGT00940000156317.w.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	11	ENSGT00400000024875.c.a.a.b.a.a.a.b	ENSGT00400000024875.c.a.a.b.a.b.o	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT01010000224840	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b.w.b	ENSGT00940000164100.A.c.a.d.a.b.b.w.a.a.a.b	ENSGT01100000263483.D.c.b.b.a	ENSGT00940000164100.A.c.a.d.a.b.b.x	ENSGT00940000164100.A.c.a.d.a.b.b.w.a.a.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00770000121806.b	ENSGT00940000166999.A
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT00400000024875.c.a.a.b.a.a.a.a	ENSGT00400000024875.c.a.a.b.a.b.p.a	ENSGT00400000024875.c.a.a.b.a.a.a.b	ENSGT00400000024875.c.a.a.b.a.b.o	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b.w.b	ENSGT00940000164100.A.c.a.d.a.b.b.w.a.a.a.b	ENSGT01100000263483.D.c.b.b.a	ENSGT00940000164100.A.c.a.d.a.b.b.x	ENSGT00940000164100.A.c.a.d.a.b.b.w.a.a.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00770000121806.b	ENSGT00940000166999.A
Haplochromini	ANCESTRAL SPECIES	4	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b.a.a.a.a	ENSGT00400000024875.c.a.a.b.a.b.p.a	ENSGT00400000024875.c.a.a.b.a.b.o	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00770000121806.b	ENSGT00940000166999.A	ENSGT00940000161917.b	ENSGT00940000156317.w.b	ENSGT01060000248847	ENSGT00950000182943	ENSGT00530000063691.a
Burton s mouthbrooder	MODERN SPECIES	521					FAM163B (ENSHBUG00000002684)	ADAMTSL2 (ENSHBUG00000002704)	mymk (ENSHBUG00000002728)	ENSHBUG00000000849	slc2a8 (ENSHBUG00000002747)	HIRA (ENSHBUG00000002779)	ENSHBUG00000002798	nudt12 (ENSHBUG00000002816)	SLC12A2 (ENSHBUG00000002893) #9	GRAMD2B (ENSHBUG00000002908) #19	ZNF608 (ENSHBUG00000002920) #20	CEP120 (ENSHBUG00000002984) #22	ENSHBUG00000002999	ENSHBUG00000003010	ENSHBUG00000003015	ENSHBUG00000003045	PRDM6 (ENSHBUG00000003065) #23	PPIC (ENSHBUG00000003081) #24	SNX2 (ENSHBUG00000003160) #26	ENSHBUG00000003186	sncaip (ENSHBUG00000003201) #27	ENSHBUG00000003227 ##30	ENSHBUG00000003324	ENSHBUG00000003351	ENSHBUG00000003361	ENSHBUG00000003371	ENSHBUG00000003382
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b.a.a.a.a	ENSGT00400000024875.c.a.a.b.a.b.p.a	ENSGT00400000024875.c.a.a.b.a.b.o	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00770000121806.b	ENSGT00940000166999.A	ENSGT00940000161917.b	ENSGT00940000156317.w.b	ENSGT01060000248847	ENSGT00950000182943	ENSGT00530000063691.a
P. nyererei	MODERN SPECIES	333	ENSPNYG00000007800	ENSPNYG00000007808	ENSPNYG00000007817	ENSPNYG00000007829	FAM163B (ENSPNYG00000007834)	ADAMTSL2 (ENSPNYG00000007852)	mymk (ENSPNYG00000007894)	ENSPNYG00000007920	slc2a8 (ENSPNYG00000007949)	HIRA (ENSPNYG00000008043)	ENSPNYG00000008121	nudt12 (ENSPNYG00000008178)	SLC12A2 (ENSPNYG00000008211) #9	GRAMD2B (ENSPNYG00000008279) #19	ZNF608 (ENSPNYG00000008317) #20	CEP120 (ENSPNYG00000008365) #22	PRDM6 (ENSPNYG00000008445) #23	ENSPNYG00000008493	ENSPNYG00000008507	ENSPNYG00000008570	ENSPNYG00000008579	PPIC (ENSPNYG00000008596) #24	SNX2 (ENSPNYG00000008640) #26	sncaip (ENSPNYG00000008703) #27	ENSPNYG00000008723 ##30	ENSPNYG00000008777	ENSPNYG00000008854	ENSPNYG00000008899	CNNM4 (ENSPNYG00000009069)	ENSPNYG00000009097	purbb (ENSPNYG00000009119)
Haplochromini_B	ANCESTRAL SPECIES	2	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b.a.a.a.a	ENSGT00400000024875.c.a.a.b.a.b.p.a	ENSGT00400000024875.c.a.a.b.a.b.o	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b.w.b	ENSGT01100000263483.D.c.b.b.a	ENSGT00940000164100.A.c.a.d.a.b.b.w.a.a.a.b	ENSGT00940000164100.A.c.a.d.a.b.b.x	ENSGT00940000164100.A.c.a.d.a.b.b.w.a.a.a.a	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00770000121806.b	ENSGT00940000166999.A
Zebra mbuna	MODERN SPECIES	1094	ENSMZEG00005019992	ENSMZEG00005019973	ENSMZEG00005019970	ENSMZEG00005019966	FAM163B (ENSMZEG00005019959)	ADAMTSL2 (ENSMZEG00005019952)	mymk (ENSMZEG00005019945)	ENSMZEG00005019938	slc2a8 (ENSMZEG00005019929)	HIRA (ENSMZEG00005019903)	ENSMZEG00005019871	nudt12 (ENSMZEG00005019855)	SLC12A2 (ENSMZEG00005019831) #9	GRAMD2B (ENSMZEG00005019826) #19	ZNF608 (ENSMZEG00005019819) #20	CEP120 (ENSMZEG00005019810) #22	CNNM4 (ENSMZEG00005019787)	ENSMZEG00005019779	ENSMZEG00005019773	ENSMZEG00005019765	PURB (ENSMZEG00005019762)	ENSMZEG00005019756	hs3st1l2 (ENSMZEG00005019749)	ENSMZEG00005019745	ENSMZEG00005019743	ENSMZEG00005019739	ENSMZEG00005019735	ENSMZEG00005019732	ENSMZEG00005019730	ENSMZEG00005019727	ENSMZEG00005019724
Eastern happy	MODERN SPECIES	3	ENSACLG00000025449	ENSACLG00000025438	ENSACLG00000025430	FAM163B (ENSACLG00000025426)	ADAMTSL2 (ENSACLG00000025414)	mymk (ENSACLG00000025383)	ENSACLG00000025369	slc2a8 (ENSACLG00000025320)	ENSACLG00000025310	HIRA (ENSACLG00000025239)	ENSACLG00000025217	nudt12 (ENSACLG00000025209)	SLC12A2 (ENSACLG00000025142) #9	GRAMD2B (ENSACLG00000025112) #19	ZNF608 (ENSACLG00000025023) #20	CEP120 (ENSACLG00000024987) #22	ENSACLG00000024859	ENSACLG00000024857	ENSACLG00000024854	ENSACLG00000024848	ENSACLG00000024836	PRDM6 (ENSACLG00000024816) #23	PPIC (ENSACLG00000024801) #24	SNX2 (ENSACLG00000024700) #26	ENSACLG00000024680	sncaip (ENSACLG00000024641) #27	ENSACLG00000024617 ##30	ENSACLG00000024487	ENSACLG00000024466	ENSACLG00000024450	ENSACLG00000024437
Lyretail cichlid	MODERN SPECIES	342	ENSNBRG00000015582	ENSNBRG00000015575	ENSNBRG00000015562	ENSNBRG00000015556	FAM163B (ENSNBRG00000015543)	ADAMTSL2 (ENSNBRG00000015443)	mymk (ENSNBRG00000015410)	ENSNBRG00000015352	slc2a8 (ENSNBRG00000015335)	HIRA (ENSNBRG00000015249)	ENSNBRG00000015190	nudt12 (ENSNBRG00000015084)	SLC12A2 (ENSNBRG00000015023) #9	ENSNBRG00000014994	ZNF608 (ENSNBRG00000014978) #20	CEP120 (ENSNBRG00000014929) #22	ENSNBRG00000014905	ENSNBRG00000014894	PRDM6 (ENSNBRG00000014868) #23	PPIC (ENSNBRG00000014844) #24	SNX2 (ENSNBRG00000014817) #26	ENSNBRG00000014802	ENSNBRG00000014784	ENSNBRG00000014760 ##30	ENSNBRG00000014738	ENSNBRG00000014725	ENSNBRG00000014721	ENSNBRG00000014707	ENSNBRG00000014663	ENSNBRG00000014645	ENSNBRG00000014535
Nile tilapia	MODERN SPECIES	3	ENSONIG00000013910	ENSONIG00000038718	ENSONIG00000035405	ENSONIG00000013902	FAM163B (ENSONIG00000038278)	ADAMTSL2 (ENSONIG00000013894)	mymk (ENSONIG00000041490)	slc2a8 (ENSONIG00000013885)	HIRA (ENSONIG00000013874)	ENSONIG00000013870	nudt12 (ENSONIG00000013868)	SLC12A2 (ENSONIG00000013827) #9	ENSONIG00000030656	GRAMD2B (ENSONIG00000013825) #19	ZNF608 (ENSONIG00000013823) #20	CEP120 (ENSONIG00000013820) #22	ENSONIG00000036301	ENSONIG00000028655	ENSONIG00000036674	ENSONIG00000030539	ENSONIG00000039822	PRDM6 (ENSONIG00000013818) #23	PPIC (ENSONIG00000013815) #24	SNX2 (ENSONIG00000013808) #26	ENSONIG00000013806	sncaip (ENSONIG00000013798) #27	ENSONIG00000013794 ##30	ENSONIG00000013782	ENSONIG00000020912	ENSONIG00000013781	ENSONIG00000039064
Midas cichlid	MODERN SPECIES	408								mymk (ENSACIG00000007657)	slc2a8 (ENSACIG00000007637)	slc2a8 (ENSACIG00000007611)	HIRA (ENSACIG00000007433)	ENSACIG00000007394	nudt12 (ENSACIG00000007328)	SLC12A2 (ENSACIG00000007264) #9	ZNF608 (ENSACIG00000007247) #20	CEP120 (ENSACIG00000007211) #22	ENSACIG00000007191	ENSACIG00000007178	ENSACIG00000007158	PRDM6 (ENSACIG00000007126) #23	PPIC (ENSACIG00000007112) #24	SNX2 (ENSACIG00000007057) #26	ENSACIG00000007039	sncaip (ENSACIG00000007013) #27
Pomacentridae	ANCESTRAL SPECIES	26	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.a.a.b.a.a	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000164100.A.c.a.d.a.b.b.v	ENSGT01100000263483.D.c.b.b.a	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000164100.A.c.a.d.a.a.a.b.b.a	ENSGT00950000182960.a.b	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159
Bicolor damselfish	MODERN SPECIES	751												nudt12 (ENSSPAG00000001618)	SLC12A2 (ENSSPAG00000001545) #9	ENSSPAG00000001528	ZNF608 (ENSSPAG00000001512) #20	CEP120 (ENSSPAG00000001397) #22	ENSSPAG00000001386	ENSSPAG00000001365	ENSSPAG00000001334	PRDM6 (ENSSPAG00000001296) #23	PPIC (ENSSPAG00000001064) #24	SNX2 (ENSSPAG00000001002) #26	sncaip (ENSSPAG00000000813) #27
Pomacentridae_A	ANCESTRAL SPECIES	34	ENSGT00400000024875.c.a.a.b.a.a.c	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00940000179411	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00940000164100.A.c.a.d.a.a.a.b.b.a	ENSGT00950000182960.a.b	ENSGT00940000165390.b.d	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b	ENSGT00390000004950
Spiny chromis	MODERN SPECIES	3199																CEP120 (ENSAPOG00000004439) #22
Amphiprion	ANCESTRAL SPECIES	40	ENSGT00400000024875.c.a.a.b.a.b.l	ENSGT00400000024875.c.a.a.b.a.b.k	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00940000179411	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000171252	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00940000164100.A.c.a.d.a.a.a.b.b.a	ENSGT00950000182960.a.b	ENSGT00940000154311.a.b.db.f	ENSGT00940000165390.b.d.db	ENSGT00940000155553.e.b	ENSGT00530000065159	ENSGT00550000074618.b
Orange clownfish	MODERN SPECIES	19	FAM163B (ENSAPEG00000021065)	ADAMTSL2 (ENSAPEG00000021086)	ENSAPEG00000021130	ENSAPEG00000021136	mymk (ENSAPEG00000021142)	ENSAPEG00000021164	slc2a8 (ENSAPEG00000021174)	HIRA (ENSAPEG00000021212)	ENSAPEG00000021307	ENSAPEG00000021356	nudt12 (ENSAPEG00000021377)	SLC12A2 (ENSAPEG00000021392) #9	ENSAPEG00000021454	GRAMD2B (ENSAPEG00000021469) #19	ZNF608 (ENSAPEG00000021515) #20	CEP120 (ENSAPEG00000021587) #22	PRDM6 (ENSAPEG00000021606) #23	ENSAPEG00000021634	ENSAPEG00000021653	PPIC (ENSAPEG00000021728) #24	SNX2 (ENSAPEG00000021798) #26	ENSAPEG00000021836	sncaip (ENSAPEG00000021842) #27	ENSAPEG00000021855 ##30	ENSAPEG00000021870	ENSAPEG00000021924	ENSAPEG00000021929	ENSAPEG00000021942	ENSAPEG00000021964	ENSAPEG00000021999	ENSAPEG00000022005
Clown anemonefish	MODERN SPECIES	1913																ENSAOCG00000023198 #22
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00940000154130.a.b.f	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT01100000263483.D.d.a.a.a.a.f.b.b	ENSGT00950000182960.a.a.a.a	ENSGT00950000182960.a.b	ENSGT01100000263483.D.d.a.a.a.a.f.a.a	ENSGT00940000164100.A.c.b.b.e.b
Oryzias	ANCESTRAL SPECIES	77			ENSGT00940000166999.A	ENSGT00940000169174	ENSGT00940000159387.e	ENSGT00940000159447.p	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30
Oryzias_b	ANCESTRAL SPECIES	98		ENSGT00390000001663.n	ENSGT00940000166999.A	ENSGT00940000169174	ENSGT00940000159387.e	ENSGT00940000159447.p	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000164100.A.c.a.d.a.b.b
Indian medaka	MODERN SPECIES	36	ENSOMEG00000004066	ENSOMEG00000004057	ENSOMEG00000004036	ENSOMEG00000004020	FAM163B (ENSOMEG00000000723)	ADAMTSL2 (ENSOMEG00000003992)	mymk (ENSOMEG00000003958)	ENSOMEG00000003945	slc2a8 (ENSOMEG00000003932)	HIRA (ENSOMEG00000003903)	ENSOMEG00000003876	nudt12 (ENSOMEG00000003853)	SLC12A2 (ENSOMEG00000003817) #9	GRAMD2B (ENSOMEG00000003757) #19	ZNF608 (ENSOMEG00000003731) #20	CEP120 (ENSOMEG00000003683) #22	PRDM6 (ENSOMEG00000003651) #23	ENSOMEG00000003632	PPIC (ENSOMEG00000003622) #24	ENSOMEG00000003599	ENSOMEG00000003577	gstt2 (ENSOMEG00000003566)	ENSOMEG00000003555	ENSOMEG00000000073	ENSOMEG00000003540	ENSOMEG00000003508	isl1a (ENSOMEG00000003453)	ENSOMEG00000003433	golph3a (ENSOMEG00000003418)	ENSOMEG00000003402	ENSOMEG00000003385
Oryzias_a	ANCESTRAL SPECIES	69				ENSGT00940000166999.A.g	ENSGT00940000169174	ENSGT00940000159387.e	ENSGT00940000159447.p	ENSGT00940000160710	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000159786 #24	ENSGT00950000182996.b.b.c.b.h.a.f	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154842.a.a	ENSGT00940000153731.a.a	ENSGT00940000154578.B	ENSGT00390000007153.a.a.a	ENSGT00910000144505	ENSGT00940000157749	ENSGT00440000033872	ENSGT00940000166509	ENSGT00940000155290.C
Japanese Medaka HdrR	MODERN SPECIES	23	ENSORLG00000028528	ENSORLG00000022377	ENSORLG00000016967	ENSORLG00000025631	ENSORLG00000016970	FAM163B (ENSORLG00000024378)	ADAMTSL2 (ENSORLG00000016979)	mymk (ENSORLG00000016982)	slc2a8 (ENSORLG00000017029)	HIRA (ENSORLG00000017037)	ENSORLG00000017043	nudt12 (ENSORLG00000017049)	ENSORLG00000017067 #9	GRAMD2B (ENSORLG00000030238) #19	ZNF608 (ENSORLG00000017076) #20	CEP120 (ENSORLG00000017086) #22	PRDM6 (ENSORLG00000017089) #23	ENSORLG00000017091	PPIC (ENSORLG00000017098) #24	ENSORLG00000030629	SNX2 (ENSORLG00000017116) #26	ENSORLG00000021985	ENSORLG00000024023	sncaip (ENSORLG00000017129) #27	ENSORLG00000017135 ##30	ENSORLG00000024584	ENSORLG00000017164	ENSORLG00000023109	ENSORLG00000025924	ENSORLG00000023906	ENSORLG00000021804
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00390000004247	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00770000121806.b	ENSGT00940000154311.b	ENSGT00940000165390.b.d	ENSGT00940000160570	ENSGT00940000155553.e.b	ENSGT00530000065159
Aplocheiloidei	ANCESTRAL SPECIES	45		ENSGT00940000156290.a	ENSGT01070000253744.b.b.e	ENSGT00940000156085	ENSGT00940000154821.a.b	ENSGT00940000156282.a.a	ENSGT00940000160420	ENSGT00940000156489	ENSGT00730000111240	ENSGT00940000154886.b	ENSGT00390000015513.a.b.a	ENSGT00390000015513.a.a.b.d	ENSGT00940000153321.b.b	ENSGT00940000153424.a.b	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT01100000263483.D.d.a.a.a.a.f.b.b	ENSGT00950000182960.a.b	ENSGT01100000263483.D.d.a.a.a.a.f.a.a.a	ENSGT00940000164100.A.c.b.b.e.a.b	ENSGT00940000165390.b.d	ENSGT00940000160570	ENSGT00940000155553.e.b
Mangrove rivulus	MODERN SPECIES	189							dmrt1 (ENSKMAG00000009879)	ENSKMAG00000009897	ENSKMAG00000009918	fbp1a (ENSKMAG00000009967)	fbp2 (ENSKMAG00000009992)	ENSKMAG00000010024	ctsla (ENSKMAG00000010046)	dapk1 (ENSKMAG00000010088)	ZNF608 (ENSKMAG00000010192) #20	CEP120 (ENSKMAG00000010232) #22	PRDM6 (ENSKMAG00000010266) #23	ENSKMAG00000010293	ENSKMAG00000010300	PPIC (ENSKMAG00000010312) #24	SNX2 (ENSKMAG00000010366) #26	ENSKMAG00000010469	ENSKMAG00000010488	ENSKMAG00000010501	sncaip (ENSKMAG00000010522) #27	ENSKMAG00000010545 ##30	ENSKMAG00000010591	ENSKMAG00000010663	ENSKMAG00000010669	ENSKMAG00000010680	ENSKMAG00000010694
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00390000004247	ENSGT00400000024875.c.a.a.a	ENSGT00400000024875.c.b	ENSGT00400000024875.c.a.a.b.a.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A	ENSGT00940000164100.A.c.b.b.e.a.b	ENSGT00940000165390.b.d	ENSGT00940000160570	ENSGT00940000155553.e.b	ENSGT00530000065159
NAME_4	ANCESTRAL SPECIES	213					ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00940000179411	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00940000169174	ENSGT00940000166999.A
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	217	ENSCVAG00000017611	srp19 (ENSCVAG00000017621)	rbp4l (ENSCVAG00000017650)	IDUA (ENSCVAG00000017691)	tnksb (ENSCVAG00000017903)	FAM163B (ENSCVAG00000017929)	ADAMTSL2 (ENSCVAG00000017974)	mymk (ENSCVAG00000018002)	slc2a8 (ENSCVAG00000018044)	HIRA (ENSCVAG00000018079)	ENSCVAG00000018234	nudt12 (ENSCVAG00000018258)	ENSCVAG00000018373 #9	GRAMD2B (ENSCVAG00000018384) #19	ZNF608 (ENSCVAG00000018407) #20	ENSCVAG00000018424 #22	CEP120 (ENSCVAG00000018469) #22	ENSCVAG00000018481	PRDM6 (ENSCVAG00000018522) #23	PPIC (ENSCVAG00000018539) #24	SNX2 (ENSCVAG00000018576) #26	ENSCVAG00000018585	sncaip (ENSCVAG00000018599) #27	ENSCVAG00000018608 ##30	ENSCVAG00000018736	zgc:158343 (ENSCVAG00000018757)	ENSCVAG00000018769	ENSCVAG00000018778	ENSCVAG00000018785	ENSCVAG00000018793
Sheepshead minnow	MODERN SPECIES	217	srp19 (ENSCVAG00000017621)	rbp4l (ENSCVAG00000017650)	IDUA (ENSCVAG00000017691)	tnksb (ENSCVAG00000017903)	FAM163B (ENSCVAG00000017929)	ADAMTSL2 (ENSCVAG00000017974)	mymk (ENSCVAG00000018002)	slc2a8 (ENSCVAG00000018044)	HIRA (ENSCVAG00000018079)	ENSCVAG00000018234	nudt12 (ENSCVAG00000018258)	ENSCVAG00000018373 #9	GRAMD2B (ENSCVAG00000018384) #19	ZNF608 (ENSCVAG00000018407) #20	ENSCVAG00000018424 #22	CEP120 (ENSCVAG00000018469) #22	ENSCVAG00000018481	PRDM6 (ENSCVAG00000018522) #23	PPIC (ENSCVAG00000018539) #24	SNX2 (ENSCVAG00000018576) #26	ENSCVAG00000018585	sncaip (ENSCVAG00000018599) #27	ENSCVAG00000018608 ##30	ENSCVAG00000018736	zgc:158343 (ENSCVAG00000018757)	ENSCVAG00000018769	ENSCVAG00000018778	ENSCVAG00000018785	ENSCVAG00000018793
Mummichog	MODERN SPECIES	255						FAM163B (ENSFHEG00000021204)	ADAMTSL2 (ENSFHEG00000021273)	mymk (ENSFHEG00000021298)	ENSFHEG00000021319	slc2a8 (ENSFHEG00000021503)	HIRA (ENSFHEG00000021582)	ENSFHEG00000021588	nudt12 (ENSFHEG00000021607)	ENSFHEG00000021735 #9	ZNF608 (ENSFHEG00000021757) #20	CEP120 (ENSFHEG00000021808) #22	ENSFHEG00000021828	PRDM6 (ENSFHEG00000021860) #23	PPIC (ENSFHEG00000021885) #24	SNX2 (ENSFHEG00000021923) #26	ENSFHEG00000021931	sncaip (ENSFHEG00000022005) #27	ENSFHEG00000022011 ##30	ENSFHEG00000022065	ENSFHEG00000022078	ENSFHEG00000022090	ENSFHEG00000022098	ENSFHEG00000022116
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00950000182888.a.b	ENSGT00390000004247	ENSGT00400000024875.c.a.a.b.a.b.e.b	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000173416	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00760000120401.a.b.a	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00770000121806.b	ENSGT00940000169174	ENSGT00940000166999.A
Platyfish	MODERN SPECIES	3	ENSXMAG00000026973	ENSXMAG00000027243	ENSXMAG00000025652	FAM163B (ENSXMAG00000028795)	ADAMTSL2 (ENSXMAG00000000048)	mymk (ENSXMAG00000000047)	ENSXMAG00000000046	slc2a8 (ENSXMAG00000000045)	HIRA (ENSXMAG00000000044)	ENSXMAG00000000043	nudt12 (ENSXMAG00000000042)	ENSXMAG00000010744 #9	GRAMD2B (ENSXMAG00000010736) #19	ENSXMAG00000021490	ZNF608 (ENSXMAG00000010905) #20	CEP120 (ENSXMAG00000015326) #22	ENSXMAG00000019889	PRDM6 (ENSXMAG00000029393) #23	PPIC (ENSXMAG00000024679) #24	SNX2 (ENSXMAG00000015264) #26	ENSXMAG00000015263	sncaip (ENSXMAG00000015244) #27	ENSXMAG00000015241 ##30	ENSXMAG00000015195	ENSXMAG00000019888	ENSXMAG00000029161	ENSXMAG00000027923	ENSXMAG00000026149	ENSXMAG00000015179	ENSXMAG00000015170	ENSXMAG00000029634
Poecilia	ANCESTRAL SPECIES	35	ENSGT00400000024875.c.a.a.b.a.b.e.a.b.b	ENSGT00400000024875.c.a.a.b.a.b.e.a.a.a	ENSGT00400000024875.c.a.a.b.a.b.f	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000173416	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00760000120401.a.b.a	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00940000166999.A	ENSGT00940000164100.A.d	ENSGT00950000182960.a.b.n	ENSGT00940000166560	ENSGT01100000263483.D.d.a.a.a.b.b	ENSGT00940000164100.A.c.b.b.e.a.a.a.b.a
NAME_6	ANCESTRAL SPECIES	143	ENSGT00400000024875.c.a.a.b.a.b.e.b.b	ENSGT00400000024875.c.a.a.b.a.b.e.b.a	ENSGT00400000024875.c.a.a.b.a.b.f	ENSGT00940000159387.e	ENSGT00940000159447	ENSGT00940000160710	ENSGT00390000004550	ENSGT00940000158795	ENSGT00550000074919	ENSGT00940000173416	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00760000120401.a.b.a	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000164100.A.c.a.d.a.b.b	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00940000159470	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00940000154842.a.a	ENSGT00390000003213	ENSGT00770000121806.b	ENSGT00940000164100.A.c.b.b.e.b.a	ENSGT01100000263483.D.d.a.a.a.a.f.a.b	ENSGT00940000164100.A.d	ENSGT00950000182960.a.b.n	ENSGT00940000166560
Sailfin molly	MODERN SPECIES	168														ENSPLAG00000003220	ZNF608 (ENSPLAG00000003232) #20	CEP120 (ENSPLAG00000003254) #22	ENSPLAG00000000052	ENSPLAG00000003287	PRDM6 (ENSPLAG00000003302) #23	PPIC (ENSPLAG00000003314) #24	SNX2 (ENSPLAG00000003324) #26	ENSPLAG00000003333	sncaip (ENSPLAG00000003364) #27	ENSPLAG00000003391 ##30	ENSPLAG00000003413	ENSPLAG00000003448	zgc:158343 (ENSPLAG00000003456)	ENSPLAG00000003459	ENSPLAG00000000053	ENSPLAG00000003471	ENSPLAG00000003473
Amazon molly	MODERN SPECIES	570	ENSPFOG00000004062	ENSPFOG00000022581	ENSPFOG00000004056	FAM163B (ENSPFOG00000004038)	ADAMTSL2 (ENSPFOG00000003730)	mymk (ENSPFOG00000003674)	ENSPFOG00000003623	slc2a8 (ENSPFOG00000003446)	HIRA (ENSPFOG00000003040)	ENSPFOG00000002950	nudt12 (ENSPFOG00000002862)	ENSPFOG00000001971 #9	GRAMD2B (ENSPFOG00000001531) #19	ENSPFOG00000023136	ZNF608 (ENSPFOG00000001325) #20	CEP120 (ENSPFOG00000001082) #22	ENSPFOG00000000973	PRDM6 (ENSPFOG00000000918) #23	PPIC (ENSPFOG00000000796) #24	SNX2 (ENSPFOG00000000593) #26	ENSPFOG00000000556	sncaip (ENSPFOG00000000485) #27	ENSPFOG00000000448 ##30	ENSPFOG00000000395	ENSPFOG00000000283	zgc:158343 (ENSPFOG00000024488)	ENSPFOG00000022089	ENSPFOG00000020982	ENSPFOG00000000263	ENSPFOG00000000259	ENSPFOG00000000243
Guppy	DUPLICATION
Guppy	MODERN SPECIES	461				FAM163B (ENSPREG00000019150)	ADAMTSL2 (ENSPREG00000019083)	mymk (ENSPREG00000019037)	slc2a8 (ENSPREG00000019011)	HIRA (ENSPREG00000018925)	ENSPREG00000018883	nudt12 (ENSPREG00000018867)	ENSPREG00000018811 #9	ENSPREG00000018792	ENSPREG00000018780	ZNF608 (ENSPREG00000018755) #20	ENSPREG00000018740 #22	CEP120 (ENSPREG00000018710) #22	ENSPREG00000018694	ENSPREG00000018687	PRDM6 (ENSPREG00000018667) #23	PPIC (ENSPREG00000018642) #24	ENSPREG00000018629	SNX2 (ENSPREG00000018578) #26	sncaip (ENSPREG00000018488) #27	ENSPREG00000018471 ##30	ENSPREG00000018414	ENSPREG00000018326	ENSPREG00000018279	TMED6 (ENSPREG00000018273)	ENSPREG00000018259	ENSPREG00000018255	ENSPREG00000018237
Guppy	MODERN SPECIES	461					FAM163B (ENSPREG00000019150)	ADAMTSL2 (ENSPREG00000019083)	mymk (ENSPREG00000019037)	slc2a8 (ENSPREG00000019011)	HIRA (ENSPREG00000018925)	ENSPREG00000018883	nudt12 (ENSPREG00000018867)	ENSPREG00000018811 #9	ENSPREG00000018792	ENSPREG00000018780	ZNF608 (ENSPREG00000018755) #20	ENSPREG00000018740 #22	CEP120 (ENSPREG00000018710) #22	ENSPREG00000018694	ENSPREG00000018687	PRDM6 (ENSPREG00000018667) #23	PPIC (ENSPREG00000018642) #24	ENSPREG00000018629	SNX2 (ENSPREG00000018578) #26	sncaip (ENSPREG00000018488) #27	ENSPREG00000018471 ##30	ENSPREG00000018414	ENSPREG00000018326	ENSPREG00000018279	TMED6 (ENSPREG00000018273)	ENSPREG00000018259	ENSPREG00000018255
Tiger tail seahorse	MODERN SPECIES	127														ENSHCOG00000012779 #19	ENSHCOG00000012798 #20	CEP120 (ENSHCOG00000012861) #22	PRDM6 (ENSHCOG00000012899) #23	PPIC (ENSHCOG00000012937) #24	SNX2 (ENSHCOG00000012953) #26	ENSHCOG00000012972	ENSHCOG00000012991	ENSHCOG00000013055 ##30	ENSHCOG00000013125	ENSHCOG00000013147	mak16 (ENSHCOG00000013162)	ENSHCOG00000013180	ENSHCOG00000013203	srp19 (ENSHCOG00000013231)	ENSHCOG00000013327	ENSHCOG00000013345	ENSHCOG00000013354
Pinecone sodierfish	MODERN SPECIES	23	ENSMMDG00005013856	ENSMMDG00005013857	ENSMMDG00005013858	FAM163B (ENSMMDG00005001101)	ADAMTSL2 (ENSMMDG00005001109)	mymk (ENSMMDG00005001116)	ENSMMDG00005001118	slc2a8 (ENSMMDG00005001121)	HIRA (ENSMMDG00005001211)	ENSMMDG00005001532	nudt12 (ENSMMDG00005001542)	SLC12A2 (ENSMMDG00005001563) #9	GRAMD2B (ENSMMDG00005001596) #19	ENSMMDG00005001619	ZNF608 (ENSMMDG00005001625) #20	CEP120 (ENSMMDG00005001666) #22	KLHL10 (ENSMMDG00005002063)	PRDM6 (ENSMMDG00005002076) #23	PPIC (ENSMMDG00005002082) #24	SNX2 (ENSMMDG00005002102) #26	ENSMMDG00005002767	ENSMMDG00005002777	ENSMMDG00005002790 ##30	ENSMMDG00005002810	zgc:158343 (ENSMMDG00005002899)	ENSMMDG00005002902	ENSMMDG00005002906	ENSMMDG00005002909	ENSMMDG00005002916	ENSMMDG00005002923	ENSMMDG00005002927
Cod	DUPLICATION
Cod	MODERN SPECIES	20	ENSGMOG00000017016	ENSGMOG00000036776	ENSGMOG00000033738	ENSGMOG00000034099	ENSGMOG00000004793	ENSGMOG00000012012	ENSGMOG00000016958	ENSGMOG00000005007	ENSGMOG00000024166	ENSGMOG00000034267	ENSGMOG00000025859	ENSGMOG00000037070	ENSGMOG00000033405	DGKZ (ENSGMOG00000011532)	ENSGMOG00000004842	ENSGMOG00000024906 #22	ENSGMOG00000036749	CHRM4 (ENSGMOG00000001144)	ENSGMOG00000027928	ENSGMOG00000022687	ENSGMOG00000025812	ENSGMOG00000036573	ENSGMOG00000005902	ENSGMOG00000006961	ENSGMOG00000006957	ENSGMOG00000035449	ENSGMOG00000005700	ENSGMOG00000005046	ENSGMOG00000024095	ALS2 (ENSGMOG00000007250)	ENSGMOG00000002312
Cod	MODERN SPECIES	2															ENSGMOG00000029335	ENSGMOG00000035445 #22	ENSGMOG00000017850 #19	ENSGMOG00000017565 #26	ENSGMOG00000023947	ENSGMOG00000027961	ENSGMOG00000036642 #27	ENSGMOG00000030514	ENSGMOG00000017460 ##30	ENSGMOG00000025179	ENSGMOG00000020038	ENSGMOG00000003967	ENSGMOG00000013285	ENSGMOG00000011659	ENSGMOG00000023470	ENSGMOG00000030007	ENSGMOG00000031696
Otomorpha	ANCESTRAL SPECIES	71	ENSGT01050000244902.a.a.a.a.a.b	ENSGT00390000018830.a.a	ENSGT00940000156997.a	ENSGT00940000156730.a	ENSGT01050000244968.c.d	ENSGT00950000182925.A	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000004950	ENSGT00530000065159	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00940000158463	ENSGT00940000158626	ENSGT00940000153988.B
Clupeiformes	ANCESTRAL SPECIES	102	ENSGT00390000007246	ENSGT01050000244902.a.a.a.a.a.b	ENSGT00390000018830.a.a	ENSGT00940000156997.a	ENSGT00940000156730.a	ENSGT01050000244968.c.d	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000004950	ENSGT00530000065159	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b #9	ENSGT00940000156980.b #19	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00940000158463	ENSGT00940000158626	ENSGT00940000167760
Atlantic herring	MODERN SPECIES	23	ENSCHAG00000024275	endog (ENSCHAG00000024269)	DAB2IP (ENSCHAG00000022839)	phf19 (ENSCHAG00000022635)	traf1 (ENSCHAG00000022601)	FIBCD1 (ENSCHAG00000022590)	ENSCHAG00000022585 #20	SLC2A6 (ENSCHAG00000022539)	SLC2A6 (ENSCHAG00000022512)	fnbp1a (ENSCHAG00000020247)	ENSCHAG00000020176	olfm1a (ENSCHAG00000020148)	GRAMD2B (ENSCHAG00000020137) #19	ZNF608 (ENSCHAG00000020091) #20	ENSCHAG00000020082	CEP120 (ENSCHAG00000019940) #22	PRDM6 (ENSCHAG00000019926) #23	PPIC (ENSCHAG00000019920) #24	SNX2 (ENSCHAG00000019810) #26	sncaip (ENSCHAG00000019782) #27	ENSCHAG00000019642 ##30	prr16 (ENSCHAG00000019612) #34	ENSCHAG00000019600	hsd17b4 (ENSCHAG00000019292) #37	DMXL1 (ENSCHAG00000019182)	sema6a (ENSCHAG00000016848)	COMMD10 (ENSCHAG00000016812)	AP3S1 (ENSCHAG00000016762)	cdo1 (ENSCHAG00000016743)	tmed7 (ENSCHAG00000016679)	fem1c (ENSCHAG00000016665)
Denticle herring	MODERN SPECIES	2	ZNF366 (ENSDCDG00000014440)	ENSDCDG00000014450	ENSDCDG00000014567	ENSDCDG00000017339	zgc:101664 (ENSDCDG00000017345)	ENSDCDG00000017350	nudt12 (ENSDCDG00000017354)	SLC12A2 (ENSDCDG00000017487) #9	GRAMD2B (ENSDCDG00000019942) #19	ZNF608 (ENSDCDG00000019944) #20	ENSDCDG00000019962	ENSDCDG00000019966	ENSDCDG00000019968	ENSDCDG00000019972	ENSDCDG00000019976	CEP120 (ENSDCDG00000019985) #22	PRDM6 (ENSDCDG00000020118) #23	PPIC (ENSDCDG00000020121) #24	SNX2 (ENSDCDG00000020144) #26	ENSDCDG00000020310	sncaip (ENSDCDG00000020311) #27	ENSDCDG00000020314 ##30	prr16 (ENSDCDG00000020344) #34	hsd17b4 (ENSDCDG00000020392) #37	DMXL1 (ENSDCDG00000022840)	sema6a (ENSDCDG00000022911)	COMMD10 (ENSDCDG00000023847)	AP3S1 (ENSDCDG00000023850)	cdo1 (ENSDCDG00000023854)	tmed7 (ENSDCDG00000023859)	fem1c (ENSDCDG00000023886)
Otophysi	ANCESTRAL SPECIES	41	ENSGT00940000156997.a	ENSGT00940000156730.a	ENSGT01050000244968.c.d	ENSGT00950000182925.A	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000179723	ENSGT00940000176961	ENSGT00390000004950	ENSGT00530000065159	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000156980.b #19	ENSGT00940000155742.a.b #9	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00940000158463	ENSGT00940000158626	ENSGT00940000153988.B
Characiphysae	ANCESTRAL SPECIES	43	ENSGT00510000048363	ENSGT00940000156973	ENSGT00940000157299.c	ENSGT00940000156730.a	ENSGT01050000244968.c.d	ENSGT00950000182925.A	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000004950	ENSGT00530000065159	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000156980.b #19	ENSGT00940000155742.a.b #9	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00940000158463	ENSGT00940000158626	ENSGT00940000153988.B
Channel catfish	MODERN SPECIES	24	ENSIPUG00000025070	efna5b (ENSIPUG00000025072)	ENSIPUG00000025074	PLPP1 (ENSIPUG00000025077)	ENSIPUG00000025079	spinb (ENSIPUG00000025080)	MFSD14B (ENSIPUG00000025081)	lrrc2 (ENSIPUG00000025083)	srp19 (ENSIPUG00000025084)	zgc:101664 (ENSIPUG00000025086)	ENSIPUG00000025088	nudt12 (ENSIPUG00000025090)	Gramd3 (ENSIPUG00000025091) #19	SLC12A2 (ENSIPUG00000025093) #9	ZNF608 (ENSIPUG00000025094) #20	cep120 (ENSIPUG00000025098) #22	prdm6 (ENSIPUG00000025101) #23	ppic (ENSIPUG00000025102) #24	SNX2 (ENSIPUG00000025103) #26	Sncaip (ENSIPUG00000025105) #27	ENSIPUG00000025107 ##30	prr16 (ENSIPUG00000025108) #34	hsd17b4 (ENSIPUG00000025110) #37	DMXL1 (ENSIPUG00000025111)	sema6a (ENSIPUG00000025112)	COMMD10 (ENSIPUG00000025113)	ap3s1 (ENSIPUG00000025115)	cdo1 (ENSIPUG00000025116)	Tmed7 (ENSIPUG00000025117)	fem1c (ENSIPUG00000025118)	ENSIPUG00000025119
Characiphysae_b	ANCESTRAL SPECIES	42	ENSGT00510000048363	ENSGT00940000156973	ENSGT00940000157299.c	ENSGT00940000156730.a	ENSGT01050000244968.c.d	ENSGT00950000182925.A	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00390000004950	ENSGT00530000065159	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000156980.b #19	ENSGT00940000155742.a.b #9	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00940000158463	ENSGT00940000158626	ENSGT00940000153988.B
Electric eel	MODERN SPECIES	37	znf367 (ENSEEEG00000009851)	cdc14b (ENSEEEG00000009485)	PRXL2C (ENSEEEG00000009439)	FBXL17 (ENSEEEG00000009433)	efna5b (ENSEEEG00000009428)	PLPP1 (ENSEEEG00000009418)	ENSEEEG00000009410	spinb (ENSEEEG00000009404)	ENSEEEG00000009207	LRRC2 (ENSEEEG00000009206)	srp19 (ENSEEEG00000009204)	zgc:101664 (ENSEEEG00000009203)	nudt12 (ENSEEEG00000009197)	SLC12A2 (ENSEEEG00000008337) #9	ZNF608 (ENSEEEG00000008277) #20	CEP120 (ENSEEEG00000008086) #22	PRDM6 (ENSEEEG00000008061) #23	PPIC (ENSEEEG00000008000) #24	SNX2 (ENSEEEG00000007862) #26	sncaip (ENSEEEG00000007851) #27	ENSEEEG00000007846 ##30	prr16 (ENSEEEG00000007843) #34	hsd17b4 (ENSEEEG00000007800) #37	DMXL1 (ENSEEEG00000007796)	sema6a (ENSEEEG00000007795)	COMMD10 (ENSEEEG00000007793)	AP3S1 (ENSEEEG00000007792)	cdo1 (ENSEEEG00000007791)	tmed7 (ENSEEEG00000007790)	fem1c (ENSEEEG00000007787)	CCDC112 (ENSEEEG00000007784)
Characoidei	ANCESTRAL SPECIES	59	ENSGT00940000156973	ENSGT00940000157299.c	ENSGT00940000156730.a	ENSGT01050000244968.c.d	ENSGT00950000182925.A	ENSGT00940000154960	ENSGT00940000156081.i	ENSGT00940000176961	ENSGT00390000004950	ENSGT00530000065159	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000156980.b #19	ENSGT00940000155742.a.b #9	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00940000158463	ENSGT00940000158626	ENSGT00940000153988.B
Red-bellied piranha	MODERN SPECIES	441							srp19 (ENSPNAG00000009392)	ENSPNAG00000009367	zgc:101664 (ENSPNAG00000009363)	ENSPNAG00000009338	ENSPNAG00000009300	nudt12 (ENSPNAG00000009289)	ENSPNAG00000009270 #19	SLC12A2 (ENSPNAG00000009199) #9	ZNF608 (ENSPNAG00000009121) #20	CEP120 (ENSPNAG00000005659) #22	PRDM6 (ENSPNAG00000009047) #23	PPIC (ENSPNAG00000009022) #24	SNX2 (ENSPNAG00000009008) #26	sncaip (ENSPNAG00000001262) #27	ENSPNAG00000001258 ##30	prr16 (ENSPNAG00000001252) #34	hsd17b4 (ENSPNAG00000008917) #37	DMXL1 (ENSPNAG00000008868)	sema6a (ENSPNAG00000008800)	COMMD10 (ENSPNAG00000008776)	AP3S1 (ENSPNAG00000008759)
Mexicana tetra	MODERN SPECIES	21	ENSAMXG00000042560	ENSAMXG00000040614	PLPP1 (ENSAMXG00000032958)	CSGALNACT1 (ENSAMXG00000021003)	spinb (ENSAMXG00000020990)	LRRC2 (ENSAMXG00000020971)	MFSD14B (ENSAMXG00000033480)	ENSAMXG00000036708	srp19 (ENSAMXG00000043011)	zgc:101664 (ENSAMXG00000025662)	ENSAMXG00000012453	nudt12 (ENSAMXG00000012458)	ENSAMXG00000012463 #19	SLC12A2 (ENSAMXG00000012506) #9	ZNF608 (ENSAMXG00000012563) #20	CEP120 (ENSAMXG00000012576) #22	PRDM6 (ENSAMXG00000012588) #23	ENSAMXG00000032577	PPIC (ENSAMXG00000041489) #24	SNX2 (ENSAMXG00000012664) #26	sncaip (ENSAMXG00000012696) #27	MAP3K8 (ENSAMXG00000043547)	MTPAP (ENSAMXG00000043393)	ENSAMXG00000012655	svila (ENSAMXG00000012684)	znf438 (ENSAMXG00000043210)	zeb1b (ENSAMXG00000012742)	arhgap12b (ENSAMXG00000012750)	KIF5B (ENSAMXG00000012765)	EPC1 (ENSAMXG00000012778)	ENSAMXG00000012793
Cyprinoidei	ANCESTRAL SPECIES	32	ENSGT00940000156997.a	ENSGT00940000156730.a	ENSGT01050000244968.c.d	ENSGT00950000182925.A	ENSGT00940000156081.i	ENSGT00940000154960	ENSGT00940000179723	ENSGT00940000176961	ENSGT00390000004950	ENSGT00530000065159	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000156980.b #19	ENSGT00940000155742.a.b #9	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786.f #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000000096.a.c	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00940000158463	ENSGT00940000158626	ENSGT00940000153988.B
Zebrafish	MODERN SPECIES	23											tmed7 (ENSDARG00000046022)	hsd17b4 (ENSDARG00000101239) #37	prr16 (ENSDARG00000101530) #34	sncaip (ENSDARG00000100198) #27	SNX2 (ENSDARG00000104128) #26	CEP120 (ENSDARG00000091326) #22	pym1 (ENSDARG00000046024)	trim36 (ENSDARG00000062794)	pggt1b (ENSDARG00000103464)	fem1c (ENSDARG00000102147)	ENSDARG00000113045 #9	nudt12 (ENSDARG00000100813)	zgc:101664 (ENSDARG00000035700)	srp19 (ENSDARG00000035699)	ENSDARG00000098478	ENSDARG00000112958	ENSDARG00000030129	spinb (ENSDARG00000035697)	ENSDARG00000089233	PLPP1 (ENSDARG00000079790)	RNF165 (ENSDARG00000078817)
Cyprininae	ANCESTRAL SPECIES	327	ENSGT00940000155135.eb.b.b	ENSGT00940000155498.b	ENSGT00390000007246	ENSGT01050000244902.a.a.a.a.a.b	ENSGT00390000018830.a.a	ENSGT00940000156997.a.b.b	ENSGT00940000156730.a.b	ENSGT01050000244968.c.d	ENSGT00950000182925.A	ENSGT00940000156081.i.a	ENSGT00940000154960.a	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000155742.a.b.b #9	ENSGT00390000008748.a.l #20	ENSGT00390000009378 #22	ENSGT00940000155852.s.b #23	ENSGT00940000159786.f #24	ENSGT00940000155798.k #26	ENSGT00390000001485.f.b #27	ENSGT00940000154779.a.b.b.a.a ##30	ENSGT00910000144204.a.e #34	ENSGT00940000158343 #37	ENSGT00940000156565.d	ENSGT00390000001500.j	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00940000158463.b	ENSGT00940000158626	ENSGT00940000153988.B	ENSGT00940000167760
Cyprininae_a	ANCESTRAL SPECIES	308			ENSGT00940000155135.eb.b.a	ENSGT00940000155498.a	ENSGT00940000156997.a.b.a.a	ENSGT00940000156730.a.a	ENSGT00940000156081.i.b	ENSGT00940000154960.b	ENSGT00390000004950	ENSGT00530000065159	ENSGT00940000155603.A.b.c	ENSGT00940000156980.b #19	ENSGT00940000155742.a.b.a #9	ENSGT00390000008748.a.k.b #20	ENSGT00390000008748.a.l #20	ENSGT00390000009378 #22	ENSGT00940000159786.f #24	ENSGT00940000155798.k #26	ENSGT00390000001485.f.a #27	ENSGT00940000154779.a.b.b.a.b ##30	ENSGT00910000144204.a.f #34	ENSGT00390000000096.a.c	ENSGT00940000156565.c.b	ENSGT00390000001500.i.a	ENSGT00940000156565.d	ENSGT00390000001500.j	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00940000158463.b	ENSGT00940000158626	ENSGT00940000167760
Common carp reference	MODERN SPECIES	17	ENSCCRG00000029945	ENSCCRG00000029950	ptger4a (ENSCCRG00000029820)	ENSCCRG00000067823	ENSCCRG00000045048	ENSCCRG00000057223	ENSCCRG00000045064	spinb (ENSCCRG00000059637)	ENSCCRG00000020437	srp19 (ENSCCRG00000081228)	zgc:101664 (ENSCCRG00000050710)	ENSCCRG00000050708	ENSCCRG00000050694 #19	ENSCCRG00000079804 #9	ZNF608 (ENSCCRG00000059790) #20	CEP120 (ENSCCRG00000053606) #22	PRDM6 (ENSCCRG00000065342) #23	PPIC (ENSCCRG00000054597) #24	SNX2 (ENSCCRG00000002377) #26	SNCAIP (ENSCCRG00000005904) #27	ENSCCRG00000020634 ##30	prr16 (ENSCCRG00000077774) #34	DMXL1 (ENSCCRG00000014874)	ENSCCRG00000045985	COMMD10 (ENSCCRG00000033470)	ENSCCRG00000062246	fem1c (ENSCCRG00000010209)	ENSCCRG00000074020	pggt1b (ENSCCRG00000035455)	trim36 (ENSCCRG00000004081)	ENSCCRG00000060878
Golden-line barbel	MODERN SPECIES	1892						FABP1 (ENSSGRG00000000325)	ZNF366 (ENSSGRG00000000333)	RNF165 (ENSSGRG00000000346)	ENSSGRG00000000352	ENSSGRG00000000378	srp19 (ENSSGRG00000000400)	zgc:101664 (ENSSGRG00000000403)	ENSSGRG00000000409	SLC12A2 (ENSSGRG00000000481) #9	ZNF608 (ENSSGRG00000001436) #20	CEP120 (ENSSGRG00000001483) #22
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	26	ENSCARG00000054337	serpind1 (ENSCARG00000054366)	ENSCARG00000054384	snap29 (ENSCARG00000054416)	ENSCARG00000054490	SLC25A1 (ENSCARG00000054528)	RASAL1 (ENSCARG00000054656)	DTX1 (ENSCARG00000054899)	ENSCARG00000054935	ENSCARG00000054986	serpind1 (ENSCARG00000055109)	ENSCARG00000055141	snap29 (ENSCARG00000055165)	ENSCARG00000055209	SLC25A1 (ENSCARG00000055248)	ENSCARG00000055348 #22	CEP120 (ENSCARG00000055366) #22	PRDM6 (ENSCARG00000055451) #23	PPIC (ENSCARG00000055464) #24	SNX2 (ENSCARG00000055502) #26	ENSCARG00000055986	ENSCARG00000055995	ENSCARG00000056059	srp19 (ENSCARG00000056196)	zgc:101664 (ENSCARG00000056214)	ENSCARG00000056228	ENSCARG00000056264	pym1 (ENSCARG00000056282)	MMP19 (ENSCARG00000056296)	ENSCARG00000056342	trim36 (ENSCARG00000056369)
Goldfish	MODERN SPECIES	26	ENSCARG00000056342	trim36 (ENSCARG00000056369)	CCDC112 (ENSCARG00000056475)	fem1c (ENSCARG00000056513)	tmed7 (ENSCARG00000056536)	cdo1 (ENSCARG00000056561)	DTX1 (ENSCARG00000056573)	RASAL1 (ENSCARG00000056607)	dgcr6 (ENSCARG00000056655)	efna5b (ENSCARG00000056676)	ENSCARG00000056703	sema6a (ENSCARG00000056849)	prr16 (ENSCARG00000057102) #34	ENSCARG00000057120 ##30	sncaip (ENSCARG00000057154) #27	ENSCARG00000057186 #22	CEP120 (ENSCARG00000057212) #22	PRDM6 (ENSCARG00000057281) #23	PPIC (ENSCARG00000057322) #24	SNX2 (ENSCARG00000057356) #26	sncaip (ENSCARG00000057433) #27	LRRTM4 (ENSCARG00000057548)	ENSCARG00000057564	bnip3la (ENSCARG00000057614)	DPYSL2 (ENSCARG00000057664)	adra1aa (ENSCARG00000060299)	tmem230b (ENSCARG00000060305)	ENSCARG00000060335	gatd3l (ENSCARG00000060361)	ENSCARG00000060392	tmem127 (ENSCARG00000060396)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	26	serpind1 (ENSCARG00000054366)	ENSCARG00000054384	snap29 (ENSCARG00000054416)	ENSCARG00000054490	SLC25A1 (ENSCARG00000054528)	RASAL1 (ENSCARG00000054656)	DTX1 (ENSCARG00000054899)	ENSCARG00000054935	ENSCARG00000054986	serpind1 (ENSCARG00000055109)	ENSCARG00000055141	snap29 (ENSCARG00000055165)	ENSCARG00000055209	SLC25A1 (ENSCARG00000055248)	ENSCARG00000055348 #22	CEP120 (ENSCARG00000055366) #22	PRDM6 (ENSCARG00000055451) #23	PPIC (ENSCARG00000055464) #24	SNX2 (ENSCARG00000055502) #26	ENSCARG00000055986	ENSCARG00000055995	ENSCARG00000056059	srp19 (ENSCARG00000056196)	zgc:101664 (ENSCARG00000056214)	ENSCARG00000056228	ENSCARG00000056264	pym1 (ENSCARG00000056282)	MMP19 (ENSCARG00000056296)	ENSCARG00000056342	trim36 (ENSCARG00000056369)	CCDC112 (ENSCARG00000056475)
Goldfish	MODERN SPECIES	26	trim36 (ENSCARG00000056369)	CCDC112 (ENSCARG00000056475)	fem1c (ENSCARG00000056513)	tmed7 (ENSCARG00000056536)	cdo1 (ENSCARG00000056561)	DTX1 (ENSCARG00000056573)	RASAL1 (ENSCARG00000056607)	dgcr6 (ENSCARG00000056655)	efna5b (ENSCARG00000056676)	ENSCARG00000056703	sema6a (ENSCARG00000056849)	prr16 (ENSCARG00000057102) #34	ENSCARG00000057120 ##30	sncaip (ENSCARG00000057154) #27	ENSCARG00000057186 #22	CEP120 (ENSCARG00000057212) #22	PRDM6 (ENSCARG00000057281) #23	PPIC (ENSCARG00000057322) #24	SNX2 (ENSCARG00000057356) #26	sncaip (ENSCARG00000057433) #27	LRRTM4 (ENSCARG00000057548)	ENSCARG00000057564	bnip3la (ENSCARG00000057614)	DPYSL2 (ENSCARG00000057664)	adra1aa (ENSCARG00000060299)	tmem230b (ENSCARG00000060305)	ENSCARG00000060335	gatd3l (ENSCARG00000060361)	ENSCARG00000060392	tmem127 (ENSCARG00000060396)	ciao1 (ENSCARG00000060415)
Osteoglossiformes	ANCESTRAL SPECIES	95	ENSGT01050000244902.a.a.a.a.a.b	ENSGT00940000165146	ENSGT00390000018830.a.a.c	ENSGT00940000156997.d	ENSGT00940000156730.a	ENSGT00950000182925.A.g	ENSGT00940000154960	ENSGT00390000004950	ENSGT00530000063749.c.b.i	ENSGT00940000155553.h	ENSGT00530000065159	ENSGT00940000155603.A.b.c	ENSGT00940000157592	ENSGT00940000158196.b.b	ENSGT00390000008748.a #20	ENSGT00390000009378 #22	ENSGT00940000155852 #23	ENSGT00940000159786 #24	ENSGT00940000155798 #26	ENSGT00390000001485 #27	ENSGT00940000154779.a.b.b ##30	ENSGT00910000144204.a #34	ENSGT00940000158343 #37	ENSGT00390000000096.a	ENSGT00940000156565	ENSGT00390000001500	ENSGT00970000193421.C.a	ENSGT00390000018226	ENSGT00940000158463	ENSGT00940000158626	ENSGT00940000167760
P. kingsleyae	MODERN SPECIES	31	mrps27 (ENSPKIG00000018916)	MAP1B (ENSPKIG00000018881)	ptger4a (ENSPKIG00000018854)	RNF165 (ENSPKIG00000018830)	ENSPKIG00000018785	spinb (ENSPKIG00000018734)	LRRC2 (ENSPKIG00000018701)	srp19 (ENSPKIG00000018671)	ENSPKIG00000018605	PIK3R1 (ENSPKIG00000018561)	zgc:101664 (ENSPKIG00000018547)	ENSPKIG00000018524	nudt12 (ENSPKIG00000018501)	DIRAS2 (ENSPKIG00000018480)	ZNF608 (ENSPKIG00000018458) #20	CEP120 (ENSPKIG00000018351) #22	PRDM6 (ENSPKIG00000018259) #23	ENSPKIG00000018230	PPIC (ENSPKIG00000018208) #24	SNX2 (ENSPKIG00000018094) #26	sncaip (ENSPKIG00000018019) #27	ENSPKIG00000017989 ##30	prr16 (ENSPKIG00000017969) #34	hsd17b4 (ENSPKIG00000017865) #37	DMXL1 (ENSPKIG00000017756)	sema6a (ENSPKIG00000017662)	COMMD10 (ENSPKIG00000017602)	mfsd4b (ENSPKIG00000017571)	AP3S1 (ENSPKIG00000017487)	cdo1 (ENSPKIG00000017457)	fem1c (ENSPKIG00000017443)
Asian bonytongue	MODERN SPECIES	8	RNF165 (ENSSFOG00015022191)	ENSSFOG00015027939	spinb (ENSSFOG00015027540)	LRRC2 (ENSSFOG00015022146)	srp19 (ENSSFOG00015025198)	ENSSFOG00015022108	PIK3R1 (ENSSFOG00015025555)	zgc:101664 (ENSSFOG00015022059)	ppp2cb (ENSSFOG00015022048)	ENSSFOG00015022001	macir (ENSSFOG00015021977)	nudt12 (ENSSFOG00015021965)	DIRAS2 (ENSSFOG00015031055)	NFIL3 (ENSSFOG00015021883)	ZNF608 (ENSSFOG00015021860) #20	CEP120 (ENSSFOG00015021846) #22	PRDM6 (ENSSFOG00015021826) #23	PPIC (ENSSFOG00015021818) #24	SNX2 (ENSSFOG00015021782) #26	ENSSFOG00015026798	sncaip (ENSSFOG00015025629) #27	ENSSFOG00015021750 ##30	prr16 (ENSSFOG00015021745) #34	hsd17b4 (ENSSFOG00015021649) #37	DMXL1 (ENSSFOG00015021452)	sema6a (ENSSFOG00015021257)	COMMD10 (ENSSFOG00015021133)	AP3S1 (ENSSFOG00015021101)	cdo1 (ENSSFOG00015031113)	tmed7 (ENSSFOG00015021056)	fem1c (ENSSFOG00015028315)
Spotted gar	MODERN SPECIES	658	slc12a2 (ENSLOCG00000008420) #9	CTXN3 (ENSLOCG00000008444) #10	prrc1 (ENSLOCG00000008454) #11	megf10 (ENSLOCG00000008463) #12	ENSLOCG00000008474	C5orf63 (ENSLOCG00000008487) #13	MARCHF3 (ENSLOCG00000008494) #14	lmnb1 (ENSLOCG00000008506) #15	ENSLOCG00000008537	ENSLOCG00000008547	phax (ENSLOCG00000008559) #17	aldh7a1 (ENSLOCG00000008570) #18	GRAMD2B (ENSLOCG00000008589) #19	ZNF608 (ENSLOCG00000008603) #20	CSNK1G3 (ENSLOCG00000008613) #21	CEP120 (ENSLOCG00000008635) #22	PRDM6 (ENSLOCG00000008663) #23	PPIC (ENSLOCG00000008677) #24	snx24 (ENSLOCG00000008691) #25	SNX2 (ENSLOCG00000008709) #26	sncaip (ENSLOCG00000008733) #27	ENSLOCG00000008742 #29	loxa (ENSLOCG00000008751) #30	SRFBP1 (ENSLOCG00000008772) #31	prr16 (ENSLOCG00000008796) #34	hsd17b4 (ENSLOCG00000008806) #37	TNFAIP8 (ENSLOCG00000008839)	DMXL1 (ENSLOCG00000008849)	DTWD2 (ENSLOCG00000008859)	ENSLOCG00000008864	sema6a (ENSLOCG00000008872)
Reedfish	MODERN SPECIES	15	CTXN3 (ENSECRG00000004388) #10	prrc1 (ENSECRG00000004401) #11	phax (ENSECRG00000004415) #17	ENSECRG00000004422	ENSECRG00000004428	ENSECRG00000004441	lmnb1 (ENSECRG00000004453) #15	MARCHF3 (ENSECRG00000004469) #14	C5orf63 (ENSECRG00000004480) #13	megf10 (ENSECRG00000004572) #12	aldh7a1 (ENSECRG00000004725) #18	GRAMD2B (ENSECRG00000004760) #19	ZNF608 (ENSECRG00000004775) #20	ENSECRG00000004796	CSNK1G3 (ENSECRG00000004831) #21	CEP120 (ENSECRG00000004888) #22	PRDM6 (ENSECRG00000004923) #23	PPIC (ENSECRG00000004934) #24	snx24 (ENSECRG00000004941) #25	hspe1 (ENSECRG00000004951)	SNX2 (ENSECRG00000004967) #26	sncaip (ENSECRG00000005009) #27	ENSECRG00000005021 #28	loxa (ENSECRG00000005028) #30	SRFBP1 (ENSECRG00000005039) #31	prr16 (ENSECRG00000005055) #34	hsd17b4 (ENSECRG00000005064) #37	TNFAIP8 (ENSECRG00000005080)	DMXL1 (ENSECRG00000005115)	DTWD2 (ENSECRG00000005143)	ENSECRG00000005156
Elephant shark	MODERN SPECIES	1554	aldh1a1 (ENSCMIG00000012647)	tmc2b (ENSCMIG00000012598)	TMC1 (ENSCMIG00000012589)	ZFAND5 (ENSCMIG00000012581)	MARCHF3 (ENSCMIG00000012577) #14	lmnb1 (ENSCMIG00000012556) #15	ENSCMIG00000012548	ENSCMIG00000012546	phax (ENSCMIG00000012544) #17	aldh7a1 (ENSCMIG00000012497) #18	ENSCMIG00000012437 #19	ZNF608 (ENSCMIG00000012423) #20	CSNK1G3 (ENSCMIG00000012260) #21	ENSCMIG00000012204	sult1st5 (ENSCMIG00000012198)	CEP120 (ENSCMIG00000012165) #22	PRDM6 (ENSCMIG00000012150) #23	ppic (ENSCMIG00000012146) #24	ENSCMIG00000012143	snx24 (ENSCMIG00000012140) #25	snx2 (ENSCMIG00000012111) #26	SNCAIP (ENSCMIG00000012095) #27	ENSCMIG00000012092 #29	loxa (ENSCMIG00000012084) #30	ENSCMIG00000012077 #31	prr16 (ENSCMIG00000012072) #34
Cyclostomata	ANCESTRAL SPECIES	299																ENSGT00390000009378 #22	ENSGT00940000155852 #23
Lamprey	MODERN SPECIES	46														ZNF608 (ENSPMAG00000006740) #20	csnk1g2a (ENSPMAG00000006746)	CEP120 (ENSPMAG00000006778) #22	PRDM6 (ENSPMAG00000006800) #23
Hagfish	MODERN SPECIES	250														ENSEBUG00000010608	csnk1g1 (ENSEBUG00000015621)	ENSEBUG00000002718 #22	PRDM6 (ENSEBUG00000008559) #23	ENSEBUG00000004760	ENSEBUG00000013042	ENSEBUG00000005029 #25	snx1a (ENSEBUG00000016069)	ENSEBUG00000008021 #29	ENSEBUG00000008790 #34	ENSEBUG00000000366 #37	ENSEBUG00000016739	ENSEBUG00000011227	LINGO2 (ENSEBUG00000001645)	ENSEBUG00000007687	ENSEBUG00000004807	ENSEBUG00000014992	ENSEBUG00000011130