Glires	ANCESTRAL SPECIES	16	ENSGT00940000162108.tb	ENSGT01010000224541	ENSGT00390000005511	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00390000016534.B #14	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602 #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00940000160702.b	ENSGT00940000153430.a.b	ENSGT01030000234641.a.b	ENSGT00390000014431	ENSGT00730000111063	ENSGT00950000183135.B.b	ENSGT00390000000403	ENSGT00940000162008	ENSGT00390000008978	ENSGT00940000158482	ENSGT00910000147822
Rodentia	ANCESTRAL SPECIES	16	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00390000016534.B #14	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602 #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00940000160702.b	ENSGT00940000153430.a.b	ENSGT01030000234641.a.b	ENSGT00390000014431	ENSGT00730000111063	ENSGT00950000183135.B.b	ENSGT00390000000403	ENSGT00940000162008	ENSGT00390000008978	ENSGT00940000158482	ENSGT00910000147822
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00390000016534.B #14	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602.g.a #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00940000160702.b	ENSGT00940000153430.a.b	ENSGT01030000234641.a.b	ENSGT00390000014431	ENSGT00730000111063	ENSGT00950000183135.B.b	ENSGT00390000000403	ENSGT00940000162008	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00390000016534.B #14	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602.g.a #21	ENSGT00940000156602.g.b ##21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00940000160702.b	ENSGT00940000153430.a.b	ENSGT01030000234641.a.b	ENSGT00390000014431	ENSGT00730000111063	ENSGT00950000183135.B.b	ENSGT00390000000403	ENSGT00940000162008	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00390000016534.B #14	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602.g.a #21	ENSGT00940000156602.g.b ##21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00940000160702.b	ENSGT00940000153430.a.b	ENSGT01030000234641.a.b	ENSGT00390000014431	ENSGT00730000111063	ENSGT00950000183135.B.b	ENSGT00390000000403	ENSGT00940000162008	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00390000016534.B #14	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602.g.a #21	ENSGT00940000156602.g.b ##21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00390000003648 #28	ENSGT00390000000050 #29	ENSGT00940000160533 #30	ENSGT00940000160447 #31	ENSGT00390000009109 #32	ENSGT01100000263552.h.b	ENSGT00940000162257 #34	ENSGT00940000160953.A #35	ENSGT00940000154838.C #36	ENSGT00940000161282 #37	ENSGT00940000161791
Murinae	ANCESTRAL SPECIES		ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00390000016534.B #14	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602.g.a #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00390000003648 #28	ENSGT00390000000050 #29	ENSGT00940000160533 #30	ENSGT00940000160447 #31	ENSGT00390000009109 #32	ENSGT01100000263552.h.b	ENSGT00940000162257 #34	ENSGT00940000160953.A #35	ENSGT00940000154838.C #36	ENSGT00940000161282 #37	ENSGT00940000161791
Rat	MODERN SPECIES		LOC100911413 (ENSRNOG00000034038) #7	Dmbt1 (ENSRNOG00000020560) #8	Htra1 (ENSRNOG00000020533) #9	Plekha1 (ENSRNOG00000020497) #10	Btbd16 (ENSRNOG00000036675) #11	Tacc2 (ENSRNOG00000020457) #12	Nsmce4a (ENSRNOG00000020452) #13	RGD1563285 (ENSRNOG00000069173) #14	Ate1 (ENSRNOG00000024414) #15	Fgfr2 (ENSRNOG00000016374) #16	LOC102555739 (ENSRNOG00000020446) #17	Wdr11 (ENSRNOG00000020430) #18	ENSRNOG00000066085 #19	Plpp4 (ENSRNOG00000020424) #20	Sec23ip (ENSRNOG00000020411) #21	Mcmbp (ENSRNOG00000020394) #22	Inpp5f (ENSRNOG00000020388) #23	Bag3 (ENSRNOG00000020298) #24	Rps2-ps13 (ENSRNOG00000069056) #25	Tial1 (ENSRNOG00000020271) #26	Rgs10 (ENSRNOG00000042592) #27	Ahsp (ENSRNOG00000020165) #28	Rusf1 (ENSRNOG00000020144) #29	Slc5a2 (ENSRNOG00000020039) #30	Tgfb1i1 (ENSRNOG00000019965) #31	Armc5 (ENSRNOG00000019935) #32	LOC103691238 (ENSRNOG00000064232) #33	Cox6a2 (ENSRNOG00000019851) #34	Itgad (ENSRNOG00000068399) #35	Itgax (ENSRNOG00000036703) #36	Itgam (ENSRNOG00000019728) #37
Mus	ANCESTRAL SPECIES		ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602.g.a #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00390000003648 #28	ENSGT00390000000050 #29	ENSGT00940000160533 #30	ENSGT00940000160447 #31	ENSGT00390000009109 #32	ENSGT01100000263552.h.b	ENSGT00940000162257 #34	ENSGT00940000160953.A #35	ENSGT00940000154838.C #36	ENSGT00940000161282 #37	ENSGT00940000161791
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602.g.a #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00390000003648 #28	ENSGT00390000000050 #29	ENSGT00940000160533 #30	ENSGT00940000160447.c #31	ENSGT00940000160447.d #31	ENSGT00390000009109 #32	ENSGT01100000263552.h.b	ENSGT00940000162257 #34	ENSGT00940000160953.A #35	ENSGT00940000154838.C #36	ENSGT00940000161282 #37
Ryukyu mouse	MODERN SPECIES	16	Fam24a (MGP_CAROLIEiJ_G0030566)	Fam24b (MGP_CAROLIEiJ_G0030565)	Cuzd1 (MGP_CAROLIEiJ_G0030564)	MGP_CAROLIEiJ_G0030563	4933402N03Rik (MGP_CAROLIEiJ_G0030562)	Htra1 (MGP_CAROLIEiJ_G0030561) #9	MGP_CAROLIEiJ_G0030560 #10	Btbd16 (MGP_CAROLIEiJ_G0030559) #11	Tacc2 (MGP_CAROLIEiJ_G0030558) #12	Nsmce4a (MGP_CAROLIEiJ_G0030557) #13	Ate1 (MGP_CAROLIEiJ_G0030556) #15	Fgfr2 (MGP_CAROLIEiJ_G0030555) #16	Wdr11 (MGP_CAROLIEiJ_G0030554) #18	Plpp4 (MGP_CAROLIEiJ_G0030553) #20	Sec23ip (MGP_CAROLIEiJ_G0030552) #21	Mcmbp (MGP_CAROLIEiJ_G0030551) #22	Inpp5f (MGP_CAROLIEiJ_G0030550) #23	Bag3 (MGP_CAROLIEiJ_G0030549) #24	Tial1 (MGP_CAROLIEiJ_G0030548) #26	Rgs10 (MGP_CAROLIEiJ_G0030547) #27	Rusf1 (MGP_CAROLIEiJ_G0030546) #29	Slc5a2 (MGP_CAROLIEiJ_G0030545) #30	MGP_CAROLIEiJ_G0030544 #31	MGP_CAROLIEiJ_G0030543 #31	Armc5 (MGP_CAROLIEiJ_G0030542) #32	9130023H24Rik (MGP_CAROLIEiJ_G0030541)	Cox6a2 (MGP_CAROLIEiJ_G0030540) #34	MGP_CAROLIEiJ_G0030539 #35	Itgax (MGP_CAROLIEiJ_G0030538) #36	MGP_CAROLIEiJ_G0030537 #37	MGP_CAROLIEiJ_G0030536 #37
Mus_B	ANCESTRAL SPECIES		ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602.g.a #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00390000003648 #28	ENSGT00390000000050 #29	ENSGT00940000160533 #30	ENSGT00940000160447.c #31	ENSGT00940000160447.d #31	ENSGT00390000009109 #32	ENSGT01100000263552.h.b	ENSGT00940000162257 #34	ENSGT00940000160953.A #35	ENSGT00940000154838.C #36	ENSGT00940000161282 #37
Mouse	MODERN SPECIES	16	Fam24b (ENSMUSG00000030858)	Cuzd1 (ENSMUSG00000040205)	Cdcp3 (ENSMUSG00000006204)	4933402N03Rik (ENSMUSG00000013668)	Dmbt1 (ENSMUSG00000047517) #7	Htra1 (ENSMUSG00000006205) #9	Plekha1 (ENSMUSG00000040268) #10	Btbd16 (ENSMUSG00000040298) #11	Tacc2 (ENSMUSG00000030852) #12	Nsmce4a (ENSMUSG00000040331) #13	Ate1 (ENSMUSG00000030850) #15	Fgfr2 (ENSMUSG00000030849) #16	Wdr11 (ENSMUSG00000042055) #18	Plpp4 (ENSMUSG00000070366) #20	Sec23ip (ENSMUSG00000055319) #21	Mcmbp (ENSMUSG00000048170) #22	Inpp5f (ENSMUSG00000042105) #23	Bag3 (ENSMUSG00000030847) #24	Tial1 (ENSMUSG00000030846) #26	Rgs10 (ENSMUSG00000030844) #27	Rusf1 (ENSMUSG00000030780) #29	Slc5a2 (ENSMUSG00000030781) #30	Tgfb1i1 (ENSMUSG00000030782) #31	Armc5 (ENSMUSG00000042178) #32	9130023H24Rik (ENSMUSG00000062944)	Cox6a2 (ENSMUSG00000030785) #34	Itgad (ENSMUSG00000070369) #35	Itgax (ENSMUSG00000030789) #36	Gm49368 (ENSMUSG00000108596)	Itgam (ENSMUSG00000030786) #37	Trim72 (ENSMUSG00000042828)
Mus_C	ANCESTRAL SPECIES	14	ENSGT00940000164044.a	ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602.g.a #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00390000003648 #28	ENSGT00390000000050 #29	ENSGT00940000160533 #30	ENSGT00940000160447.c #31	ENSGT00940000160447.d #31	ENSGT00390000009109 #32	ENSGT01100000263552.h.b	ENSGT00940000162257 #34	ENSGT00940000160953.A #35	ENSGT00940000154838.C #36	ENSGT00940000161282 #37
Steppe mouse	MODERN SPECIES	3190			Htra1 (ENSMSIG00000009092) #9	ENSMSIG00000008942 #10	Btbd16 (ENSMSIG00000008853) #11	Tacc2 (ENSMSIG00000008632) #12	Nsmce4a (ENSMSIG00000008558) #13	ENSMSIG00000008533	Ate1 (ENSMSIG00000008300) #15	Fgfr2 (ENSMSIG00000007996) #16	Wdr11 (ENSMSIG00000007834) #18	ENSMSIG00000007803	Plpp4 (ENSMSIG00000007743) #20	ENSMSIG00000007730	Sec23ip (ENSMSIG00000007682) #21	Mcmbp (ENSMSIG00000007578) #22	ENSMSIG00000007565	Inpp5f (ENSMSIG00000007462) #23	ENSMSIG00000007441
spretus	MODERN SPECIES	16	Fam24a (MGP_SPRETEiJ_G0031680)	Fam24b (MGP_SPRETEiJ_G0031679)	Cuzd1 (MGP_SPRETEiJ_G0031678)	MGP_SPRETEiJ_G0031677	4933402N03Rik (MGP_SPRETEiJ_G0031676)	Htra1 (MGP_SPRETEiJ_G0031675) #9	Plekha1 (MGP_SPRETEiJ_G0031674) #10	Btbd16 (MGP_SPRETEiJ_G0031673) #11	Tacc2 (MGP_SPRETEiJ_G0031672) #12	Nsmce4a (MGP_SPRETEiJ_G0031671) #13	Ate1 (MGP_SPRETEiJ_G0031670) #15	Fgfr2 (MGP_SPRETEiJ_G0031669) #16	Wdr11 (MGP_SPRETEiJ_G0031668) #18	Plpp4 (MGP_SPRETEiJ_G0031667) #20	Sec23ip (MGP_SPRETEiJ_G0031666) #21	Mcmbp (MGP_SPRETEiJ_G0031665) #22	Inpp5f (MGP_SPRETEiJ_G0031664) #23	Bag3 (MGP_SPRETEiJ_G0031663) #24	Tial1 (MGP_SPRETEiJ_G0031662) #26	Rgs10 (MGP_SPRETEiJ_G0031661) #27	Rusf1 (MGP_SPRETEiJ_G0031660) #29	Slc5a2 (MGP_SPRETEiJ_G0031659) #30	MGP_SPRETEiJ_G0031658 #31	MGP_SPRETEiJ_G0031657 #31	Armc5 (MGP_SPRETEiJ_G0031656) #32	9130023H24Rik (MGP_SPRETEiJ_G0031655)	Cox6a2 (MGP_SPRETEiJ_G0031654) #34	MGP_SPRETEiJ_G0031653 #35	Itgax (MGP_SPRETEiJ_G0031652) #36	MGP_SPRETEiJ_G0031651 #37	MGP_SPRETEiJ_G0031650 #37
Shrew mouse	MODERN SPECIES		Fam24a (MGP_PahariEiJ_G0013773)	Fam24b (MGP_PahariEiJ_G0013772)	Cuzd1 (MGP_PahariEiJ_G0013771)	MGP_PahariEiJ_G0013770	4933402N03Rik (MGP_PahariEiJ_G0013769)	Htra1 (MGP_PahariEiJ_G0013768) #9	Plekha1 (MGP_PahariEiJ_G0013767) #10	Btbd16 (MGP_PahariEiJ_G0013766) #11	Tacc2 (MGP_PahariEiJ_G0013765) #12	Nsmce4a (MGP_PahariEiJ_G0013764) #13	Ate1 (MGP_PahariEiJ_G0013763) #15	Fgfr2 (MGP_PahariEiJ_G0013762) #16	Wdr11 (MGP_PahariEiJ_G0013761) #18	MGP_PahariEiJ_G0013760 #20	Sec23ip (MGP_PahariEiJ_G0013759) #21	Mcmbp (MGP_PahariEiJ_G0013758) #22	Inpp5f (MGP_PahariEiJ_G0013757) #23	Bag3 (MGP_PahariEiJ_G0013756) #24	Tial1 (MGP_PahariEiJ_G0013755) #26	Rgs10 (MGP_PahariEiJ_G0013754) #27	Rusf1 (MGP_PahariEiJ_G0013753) #29	Slc5a2 (MGP_PahariEiJ_G0013752) #30	MGP_PahariEiJ_G0013751 #31	MGP_PahariEiJ_G0013750 #31	Armc5 (MGP_PahariEiJ_G0013749) #32	9130023H24Rik (MGP_PahariEiJ_G0013748)	Cox6a2 (MGP_PahariEiJ_G0013747) #34	MGP_PahariEiJ_G0013746 #35	Itgax (MGP_PahariEiJ_G0013745) #36	MGP_PahariEiJ_G0013744 #37	MGP_PahariEiJ_G0013743 #37
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00390000016534.B #14	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602.g.a #21	ENSGT00940000156602.g.b ##21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00390000003648 #28	ENSGT00390000000050 #29	ENSGT00940000160533 #30	ENSGT00940000160447 #31	ENSGT00390000009109 #32	ENSGT01100000263552.h.b	ENSGT00940000162257 #34	ENSGT00940000160953.A #35	ENSGT00940000154838.C #36	ENSGT00940000161282 #37	ENSGT00940000161791
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602.g.a #21	ENSGT00940000156602.g.b ##21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00390000000050 #29	ENSGT00940000160533 #30	ENSGT00940000160447 #31	ENSGT00390000009109 #32	ENSGT00940000153104.f	ENSGT00940000162257 #34	ENSGT00940000160953.A #35	ENSGT00940000154838.C #36	ENSGT00940000161282 #37	ENSGT00940000161791	ENSGT00940000161873
Chinese hamster chok1gshd	MODERN SPECIES	401	ENSCGRG00001010191	ENSCGRG00001021611	Cuzd1 (ENSCGRG00001016877)	ENSCGRG00001005841	4933402N03Rik (ENSCGRG00001021980)	Htra1 (ENSCGRG00001020772) #9	Plekha1 (ENSCGRG00001014871) #10	Btbd16 (ENSCGRG00001003604) #11	ENSCGRG00001021443 #12	Nsmce4a (ENSCGRG00001024552) #13	Ate1 (ENSCGRG00001015040) #15	Fgfr2 (ENSCGRG00001015969) #16	Wdr11 (ENSCGRG00001014792) #18	Plpp4 (ENSCGRG00001022754) #20	Sec23ip (ENSCGRG00001017822) #21	Mcmbp (ENSCGRG00001008541) #22	Inpp5f (ENSCGRG00001018515) #23	Bag3 (ENSCGRG00001013021) #24	Tial1 (ENSCGRG00001012762) #26	Rgs10 (ENSCGRG00001023110) #27	Rusf1 (ENSCGRG00001021809) #29	Slc5a2 (ENSCGRG00001017676) #30	Tgfb1i1 (ENSCGRG00001013242) #31	Armc5 (ENSCGRG00001019321) #32	ENSCGRG00001002394	Cox6a2 (ENSCGRG00001006668) #34	Itgad (ENSCGRG00001019849) #35	Itgax (ENSCGRG00001010973) #36	Itgam (ENSCGRG00001020764) #37	Trim72 (ENSCGRG00001003643)	Pycard (ENSCGRG00001000516)
Golden Hamster	MODERN SPECIES	617	2310057M21Rik (ENSMAUG00000006383)	Cuzd1 (ENSMAUG00000005301)	ENSMAUG00000009283	4933402N03Rik (ENSMAUG00000004597)	Htra1 (ENSMAUG00000006347) #9	Plekha1 (ENSMAUG00000008559) #10	Btbd16 (ENSMAUG00000006732) #11	ENSMAUG00000005429 #12	Nsmce4a (ENSMAUG00000004938) #13	Ate1 (ENSMAUG00000007472) #15	Fgfr2 (ENSMAUG00000012248) #16	Wdr11 (ENSMAUG00000008685) #18	Plpp4 (ENSMAUG00000006636) #20	ENSMAUG00000006177 #21	ENSMAUG00000005483 ##21	ENSMAUG00000010608 #22	Inpp5f (ENSMAUG00000010345) #23	Bag3 (ENSMAUG00000010387) #24	ENSMAUG00000008932 #26	Rgs10 (ENSMAUG00000011265) #27	Rusf1 (ENSMAUG00000007110) #29	Slc5a2 (ENSMAUG00000009034) #30	Tgfb1i1 (ENSMAUG00000005956) #31	Armc5 (ENSMAUG00000006134) #32	Cox6a2 (ENSMAUG00000008662) #34	Itgad (ENSMAUG00000010022) #35	Itgax (ENSMAUG00000008615) #36	Itgam (ENSMAUG00000014830) #37	Trim72 (ENSMAUG00000010635)	Pycard (ENSMAUG00000006414)	Fus (ENSMAUG00000009599)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00390000016534.B #14	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602.g.b ##21	ENSGT00940000156602.g.a #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00390000003648 #28	ENSGT00390000000050 #29	ENSGT00940000160533 #30	ENSGT00940000160447 #31	ENSGT00390000009109 #32	ENSGT01100000263552.h.b	ENSGT00940000162257 #34	ENSGT00940000160953.A #35	ENSGT00940000154838.C #36	ENSGT00940000161282 #37	ENSGT00940000161791
Prairie vole	MODERN SPECIES	16	Cuzd1 (ENSMOCG00000019620)	ENSMOCG00000015698	ENSMOCG00000002270	4933402N03Rik (ENSMOCG00000021499)	Htra1 (ENSMOCG00000022155) #9	Plekha1 (ENSMOCG00000017137) #10	Btbd16 (ENSMOCG00000019789) #11	ENSMOCG00000005035 #12	Nsmce4a (ENSMOCG00000010931) #13	Ate1 (ENSMOCG00000006090) #15	Fgfr2 (ENSMOCG00000017948) #16	Wdr11 (ENSMOCG00000017742) #18	Plpp4 (ENSMOCG00000012214) #20	ENSMOCG00000011869 ##21	ENSMOCG00000019551 #21	Mcmbp (ENSMOCG00000019379) #22	Inpp5f (ENSMOCG00000015647) #23	Bag3 (ENSMOCG00000018609) #24	Tial1 (ENSMOCG00000014244) #26	Rgs10 (ENSMOCG00000011142) #27	Rusf1 (ENSMOCG00000021936) #29	ENSMOCG00000021793 #30	Tgfb1i1 (ENSMOCG00000019509) #31	Armc5 (ENSMOCG00000019608) #32	Cox6a2 (ENSMOCG00000021087) #34	Itgad (ENSMOCG00000019558) #35	Itgax (ENSMOCG00000011415) #36	Itgam (ENSMOCG00000021069) #37	Trim72 (ENSMOCG00000009615)	Pycard (ENSMOCG00000000469)	ENSMOCG00000006871
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000024600 #7	ENSPEMG00000028257 #7	Htra1 (ENSPEMG00000022401) #9	Plekha1 (ENSPEMG00000021169) #10	Btbd16 (ENSPEMG00000021258) #11	ENSPEMG00000030243 #12	ENSPEMG00000009363 #12	Nsmce4a (ENSPEMG00000021690) #13	ENSPEMG00000025302 #14	Ate1 (ENSPEMG00000022740) #15	Fgfr2 (ENSPEMG00000014436) #16	Wdr11 (ENSPEMG00000022330) #18	Plpp4 (ENSPEMG00000022713) #20	ENSPEMG00000025267	Sec23ip (ENSPEMG00000022060) #21	Mcmbp (ENSPEMG00000021598) #22	Inpp5f (ENSPEMG00000023406) #23	Bag3 (ENSPEMG00000016897) #24	Tial1 (ENSPEMG00000014538) #26	Rgs10 (ENSPEMG00000022501) #27	ENSPEMG00000025167 #28	Rusf1 (ENSPEMG00000022677) #29	Slc5a2 (ENSPEMG00000024257) #30	Tgfb1i1 (ENSPEMG00000022910) #31	Armc5 (ENSPEMG00000008687) #32	9130023H24Rik (ENSPEMG00000013683)	Cox6a2 (ENSPEMG00000023966) #34	Itgad (ENSPEMG00000021966) #35	Itgax (ENSPEMG00000016325) #36	Itgam (ENSPEMG00000023912) #37	Trim72 (ENSPEMG00000022637)
Upper Galilee mountains blind mole rat	MODERN SPECIES	556	ENSNGAG00000001948	Cuzd1 (ENSNGAG00000005205)	ENSNGAG00000009762	4933402N03Rik (ENSNGAG00000013572)	Htra1 (ENSNGAG00000014707) #9	Plekha1 (ENSNGAG00000016064) #10	Btbd16 (ENSNGAG00000019177) #11	ENSNGAG00000012564 #12	Nsmce4a (ENSNGAG00000009717) #13	Ate1 (ENSNGAG00000011904) #15	Fgfr2 (ENSNGAG00000017837) #16	Wdr11 (ENSNGAG00000001781) #18	Plpp4 (ENSNGAG00000018055) #20	ENSNGAG00000022208 #21	ENSNGAG00000022868 ##21	Mcmbp (ENSNGAG00000001050) #22	Inpp5f (ENSNGAG00000016489) #23	Bag3 (ENSNGAG00000018737) #24	Tial1 (ENSNGAG00000020427) #26	Rgs10 (ENSNGAG00000022036) #27	Grk5 (ENSNGAG00000022629)	Prdx3 (ENSNGAG00000006625)	Sfxn4 (ENSNGAG00000016136)	Dennd10 (ENSNGAG00000017203)	Eif3a (ENSNGAG00000019550)	Nanos1 (ENSNGAG00000023539)	Cacul1 (ENSNGAG00000023911)	Prlhr (ENSNGAG00000009274)	Fam204a (ENSNGAG00000001002)	Rab11fip2 (ENSNGAG00000008604)	Emx2 (ENSNGAG00000020570)
Lesser Egyptian jerboa	MODERN SPECIES	70	ENSJJAG00000018148	Cuzd1 (ENSJJAG00000022053)	ENSJJAG00000011591	4933402N03Rik (ENSJJAG00000001575)	Htra1 (ENSJJAG00000012131) #9	Plekha1 (ENSJJAG00000019344) #10	Btbd16 (ENSJJAG00000012283) #11	ENSJJAG00000015501 #12	Nsmce4a (ENSJJAG00000020152) #13	Ate1 (ENSJJAG00000013127) #15	Fgfr2 (ENSJJAG00000012859) #16	Wdr11 (ENSJJAG00000014160) #18	Plpp4 (ENSJJAG00000022845) #20	ENSJJAG00000014744 #21	ENSJJAG00000021258 ##21	Mcmbp (ENSJJAG00000022939) #22	Inpp5f (ENSJJAG00000020126) #23	ENSJJAG00000016414	ENSJJAG00000010122	Bag3 (ENSJJAG00000013499) #24	ENSJJAG00000005398 #26	ENSJJAG00000015632	Rgs10 (ENSJJAG00000010554) #27	Grk5 (ENSJJAG00000022251)	Prdx3 (ENSJJAG00000023489)	Sfxn4 (ENSJJAG00000009478)	Dennd10 (ENSJJAG00000006686)	Eif3a (ENSJJAG00000015031)	Cacul1 (ENSJJAG00000017702)	Prlhr (ENSJJAG00000010343)	Fam204a (ENSJJAG00000012691)
Kangaroo rat	MODERN SPECIES	377	2310057M21Rik (ENSDORG00000028211)	Fam24a (ENSDORG00000010469)	Cuzd1 (ENSDORG00000007077)	ENSDORG00000007072	Htra1 (ENSDORG00000015731) #9	Plekha1 (ENSDORG00000024017) #10	Btbd16 (ENSDORG00000005110) #11	ENSDORG00000003881 #12	Nsmce4a (ENSDORG00000003880) #13	Ate1 (ENSDORG00000011669) #15	Fgfr2 (ENSDORG00000005639) #16	Wdr11 (ENSDORG00000003077) #18	Plpp4 (ENSDORG00000002515) #20	ENSDORG00000008015 ##21	ENSDORG00000027445 ##21	Mcmbp (ENSDORG00000008011) #22	Inpp5f (ENSDORG00000003458) #23	Bag3 (ENSDORG00000011527) #24	Tial1 (ENSDORG00000010683) #26	Rgs10 (ENSDORG00000003521) #27	Grk5 (ENSDORG00000008496)	Prdx3 (ENSDORG00000004623)	Sfxn4 (ENSDORG00000004492)	Dennd10 (ENSDORG00000026703)	Eif3a (ENSDORG00000003481)	Nanos1 (ENSDORG00000029226)	Cacul1 (ENSDORG00000028189)	Prlhr (ENSDORG00000012693)	Fam204a (ENSDORG00000002074)	Rab11fip2 (ENSDORG00000010895)
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00950000183145.E #7	ENSGT00390000005511	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00390000016534.B #14	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602 #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00940000160702.b	ENSGT00940000153430.a.b	ENSGT01030000234641.a.b	ENSGT00390000014431	ENSGT00730000111063	ENSGT00950000183135.B.b	ENSGT00390000000403	ENSGT00940000162008	ENSGT00390000008978	ENSGT00940000158482	ENSGT00910000147822
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00390000017384	ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602 #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000154962.B	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00940000160702.b	ENSGT00940000153430.a.b	ENSGT00390000014431	ENSGT00730000111063	ENSGT00950000183135.B.b	ENSGT00390000000403	ENSGT00940000162008	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00390000017384	ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602 #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000154962.B	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00940000160702.b	ENSGT00940000153430.a.b	ENSGT00390000014431	ENSGT00730000111063	ENSGT00950000183135.B.b	ENSGT00390000000403	ENSGT00940000162008	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00390000017384	ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602 #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00940000160702.b	ENSGT00940000153430.a.b	ENSGT00390000014431	ENSGT00730000111063	ENSGT00950000183135.B.b	ENSGT00390000000403	ENSGT00940000162008	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00390000017746
Long-tailed chinchilla	MODERN SPECIES	258											ENSCLAG00000000970 #16	WDR11 (ENSCLAG00000001575) #18	PLPP4 (ENSCLAG00000001292) #20	ENSCLAG00000004266	SEC23IP (ENSCLAG00000003871) #21	MCMBP (ENSCLAG00000003713) #22	INPP5F (ENSCLAG00000002847) #23	BAG3 (ENSCLAG00000001524) #24	TIAL1 (ENSCLAG00000001273) #26	RGS10 (ENSCLAG00000001093) #27	GRK5 (ENSCLAG00000001870)
Degu	MODERN SPECIES	51	ENSODEG00000017758 #12	NSMCE4A (ENSODEG00000017586) #13	ATE1 (ENSODEG00000017714) #15	ENSODEG00000017613	FGFR2 (ENSODEG00000017727) #16	ENSODEG00000017521	ENSODEG00000017729	WDR11 (ENSODEG00000017999) #18	ENSODEG00000017528	PLPP4 (ENSODEG00000017787) #20	ENSODEG00000017622	ENSODEG00000017620	ENSODEG00000020513	ENSODEG00000017568 #21	ENSODEG00000017627 #21	MCMBP (ENSODEG00000017666) #22	INPP5F (ENSODEG00000017771) #23	BAG3 (ENSODEG00000017665) #24	ENSODEG00000020474	TIAL1 (ENSODEG00000017741) #26	RGS10 (ENSODEG00000017673) #27	GRK5 (ENSODEG00000017760)	ENSODEG00000017739	ENSODEG00000017551	EIF3A (ENSODEG00000017775)	NANOS1 (ENSODEG00000017556)	CACUL1 (ENSODEG00000017578)	PRLHR (ENSODEG00000020548)	ENSODEG00000017661	ENSODEG00000018333	ENSODEG00000017684
Guinea pig	MODERN SPECIES	1	ENSCPOG00000037527	PSTK (ENSCPOG00000030265)	C10orf88 (ENSCPOG00000006675)	CUZD1 (ENSCPOG00000003649)	ENSCPOG00000001267	HTRA1 (ENSCPOG00000000632) #9	PLEKHA1 (ENSCPOG00000000631) #10	BTBD16 (ENSCPOG00000000630) #11	ENSCPOG00000000626 #12	NSMCE4A (ENSCPOG00000000625) #13	ATE1 (ENSCPOG00000025966) #15	FGFR2 (ENSCPOG00000008833) #16	WDR11 (ENSCPOG00000014291) #18	PLPP4 (ENSCPOG00000012587) #20	SEC23IP (ENSCPOG00000004752) #21	MCMBP (ENSCPOG00000009028) #22	INPP5F (ENSCPOG00000009019) #23	BAG3 (ENSCPOG00000007549) #24	ENSCPOG00000006074	RGS10 (ENSCPOG00000004325) #27	GRK5 (ENSCPOG00000007453)	PRDX3 (ENSCPOG00000039588)	DENND10 (ENSCPOG00000015190)	EIF3A (ENSCPOG00000015188)	NANOS1 (ENSCPOG00000038609)	CACUL1 (ENSCPOG00000010902)	PRLHR (ENSCPOG00000007186)	FAM204A (ENSCPOG00000034589)	RAB11FIP2 (ENSCPOG00000000453)	EMX2 (ENSCPOG00000003299)	PDZD8 (ENSCPOG00000029989)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000043818	BTBD16 (ENSHGLG00000010643) #11	ENSHGLG00000014774 #12	ENSHGLG00000035516 #12	NSMCE4A (ENSHGLG00000013057) #13	ENSHGLG00000018201 #15	ENSHGLG00000045128	ENSHGLG00000006514	ENSHGLG00000032507	ENSHGLG00000011201 #16	WDR11 (ENSHGLG00000010871) #18	ENSHGLG00000044013	PLPP4 (ENSHGLG00000012927) #20	ENSHGLG00000045415	SEC23IP (ENSHGLG00000013752) #21	ENSHGLG00000011466 #22	INPP5F (ENSHGLG00000009930) #23	ENSHGLG00000042038	BAG3 (ENSHGLG00000013505) #24	ENSHGLG00000012192	TIAL1 (ENSHGLG00000013775) #26	ENSHGLG00000034213	RGS10 (ENSHGLG00000037265) #27	GRK5 (ENSHGLG00000050923)	ENSHGLG00000038210	ENSHGLG00000011210	ENSHGLG00000009711	DENND10 (ENSHGLG00000010220)	EIF3A (ENSHGLG00000013260)	NANOS1 (ENSHGLG00000045577)	ENSHGLG00000011185
Naked mole-rat female	MODERN SPECIES	15	ENSHGLG00000009679	ENSHGLG00000014594	GSG1L (ENSHGLG00000049570)	KATNIP (ENSHGLG00000016183)	GTF3C1 (ENSHGLG00000011628)	ENSHGLG00000040451	ENSHGLG00000041088	NSMCE1 (ENSHGLG00000006540)	KDM8 (ENSHGLG00000015770)	ENSHGLG00000043464	ENSHGLG00000009416	HS3ST4 (ENSHGLG00000044229)	ENSHGLG00000050225	ZKSCAN2 (ENSHGLG00000015971)	AQP8 (ENSHGLG00000015845)	ENSHGLG00000048943 #22	ENSHGLG00000016130	LCMT1 (ENSHGLG00000018379)	ARHGAP17 (ENSHGLG00000009967)	SLC5A11 (ENSHGLG00000012250)	TNRC6A (ENSHGLG00000012474)	ENSHGLG00000008327	ENSHGLG00000039762	ENSHGLG00000018993	CACNG3 (ENSHGLG00000012458)	ENSHGLG00000016035	ENSHGLG00000012194	ENSHGLG00000002145	ENSHGLG00000048453	ENSHGLG00000010667	ENSHGLG00000012125
Sciuridae	ANCESTRAL SPECIES	21	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00950000183145.E #7	ENSGT00390000005511	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00390000016534.B #14	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602 #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00940000160702.b	ENSGT00940000153430.a.b	ENSGT01030000234641.a.b	ENSGT00390000014431	ENSGT00730000111063	ENSGT00950000183135.B.b	ENSGT00390000000403	ENSGT00940000162008	ENSGT00390000008978	ENSGT00940000158482	ENSGT00910000147822
Marmotini	ANCESTRAL SPECIES	16	ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00940000156955 #9	ENSGT00940000155157.k #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00390000016534.B #14	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602 #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00940000160702.b	ENSGT00940000153430.a.b	ENSGT01030000234641.a.b	ENSGT00390000014431	ENSGT00730000111063	ENSGT00390000000403	ENSGT00940000162008	ENSGT00390000008978	ENSGT00940000158482	ENSGT00910000147822	ENSGT00940000157425.B
Marmotini_b	ANCESTRAL SPECIES	27	ENSGT00940000164044.b	ENSGT00940000154525.b.a	ENSGT00940000162108.tb	ENSGT00390000005511	ENSGT00940000156955 #9	ENSGT00940000155157.k #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00390000016534.B #14	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602 #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00940000160702.b	ENSGT00940000153430.a.b	ENSGT01030000234641.a.b	ENSGT00390000014431	ENSGT00940000168868	ENSGT00940000164222	ENSGT00730000111063	ENSGT00390000000403	ENSGT00940000162008	ENSGT00390000008978	ENSGT00940000158482
Arctic ground squirrel	MODERN SPECIES	28	ENSUPAG00010004894	ENSUPAG00010004901	HTRA1 (ENSUPAG00010004911) #9	ENSUPAG00010004924 #10	ENSUPAG00010004971	BTBD16 (ENSUPAG00010004978) #11	TACC2 (ENSUPAG00010005112) #12	NSMCE4A (ENSUPAG00010006240) #13	ENSUPAG00010006255 #14	ATE1 (ENSUPAG00010006266) #15	FGFR2 (ENSUPAG00010006384) #16	WDR11 (ENSUPAG00010006463) #18	PLPP4 (ENSUPAG00010006532) #20	ENSUPAG00010006552	SEC23IP (ENSUPAG00010006554) #21	MCMBP (ENSUPAG00010006578) #22	INPP5F (ENSUPAG00010006608) #23	BAG3 (ENSUPAG00010006628) #24	TIAL1 (ENSUPAG00010006642) #26	RGS10 (ENSUPAG00010006669) #27	GRK5 (ENSUPAG00010006723)	PRDX3 (ENSUPAG00010006779)	SFXN4 (ENSUPAG00010006790)	ENSUPAG00010006798	ENSUPAG00010006801	EIF3A (ENSUPAG00010006808)	CACUL1 (ENSUPAG00010006883)	PRLHR (ENSUPAG00010006938)	FAM204A (ENSUPAG00010006940)	RAB11FIP2 (ENSUPAG00010006952)	ENSUPAG00010006967
Squirrel	MODERN SPECIES	86	ENSSTOG00000033040	ENSSTOG00000030864	CUZD1 (ENSSTOG00000008183)	ENSSTOG00000026812	ENSSTOG00000034031	HTRA1 (ENSSTOG00000026475) #9	ENSSTOG00000010191 #10	BTBD16 (ENSSTOG00000015270) #11	ENSSTOG00000022252 #12	NSMCE4A (ENSSTOG00000011112) #13	ATE1 (ENSSTOG00000027779) #15	FGFR2 (ENSSTOG00000003979) #16	WDR11 (ENSSTOG00000006935) #18	PLPP4 (ENSSTOG00000006962) #20	SEC23IP (ENSSTOG00000005178) #21	MCMBP (ENSSTOG00000005145) #22	INPP5F (ENSSTOG00000005115) #23	ENSSTOG00000032848	BAG3 (ENSSTOG00000023267) #24	TIAL1 (ENSSTOG00000025095) #26	RGS10 (ENSSTOG00000004925) #27	GRK5 (ENSSTOG00000002553)	PRDX3 (ENSSTOG00000002537)	SFXN4 (ENSSTOG00000032860)	DENND10 (ENSSTOG00000020685)	EIF3A (ENSSTOG00000002512)	CACUL1 (ENSSTOG00000007083)	PRLHR (ENSSTOG00000025720)	FAM204A (ENSSTOG00000028024)	RAB11FIP2 (ENSSTOG00000006253)	EMX2 (ENSSTOG00000012675)
Alpin marmot	MODERN SPECIES	53	ENSMMMG00000001790 ##7	ENSMMMG00000001770 #9	ENSMMMG00000001757	ENSMMMG00000001679 #10	BTBD16 (ENSMMMG00000001579) #11	ENSMMMG00000001553 #12	ENSMMMG00000001271 #12	NSMCE4A (ENSMMMG00000001206) #13	ATE1 (ENSMMMG00000001092) #15	FGFR2 (ENSMMMG00000000986) #16	WDR11 (ENSMMMG00000000912) #18	ENSMMMG00000000896	ENSMMMG00000000883	PLPP4 (ENSMMMG00000000832) #20	SEC23IP (ENSMMMG00000000778) #21	MCMBP (ENSMMMG00000000744) #22	INPP5F (ENSMMMG00000000681) #23	BAG3 (ENSMMMG00000000616) #24	TIAL1 (ENSMMMG00000000560) #26	RGS10 (ENSMMMG00000000551) #27	GRK5 (ENSMMMG00000000513)	PRDX3 (ENSMMMG00000000500)	SFXN4 (ENSMMMG00000000466)	DENND10 (ENSMMMG00000000410)	EIF3A (ENSMMMG00000000325)	CACUL1 (ENSMMMG00000000294)	PRLHR (ENSMMMG00000000282)	ENSMMMG00000000261	RAB11FIP2 (ENSMMMG00000000233)	ENSMMMG00000000226	EMX2 (ENSMMMG00000000198)
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005001252	HTRA1 (ENSSVLG00005001280) #9	PLEKHA1 (ENSSVLG00005001323) #10	ENSSVLG00005001346	BTBD16 (ENSSVLG00005001375) #11	ENSSVLG00005001566 #12	ENSSVLG00005001901 #12	ENSSVLG00005001936 #13	ENSSVLG00005001969 #14	ATE1 (ENSSVLG00005002012) #15	ENSSVLG00005002095	FGFR2 (ENSSVLG00005002254) #16	WDR11 (ENSSVLG00005002429) #18	PLPP4 (ENSSVLG00005002461) #20	SEC23IP (ENSSVLG00005002496) #21	MCMBP (ENSSVLG00005002533) #22	INPP5F (ENSSVLG00005002590) #23	BAG3 (ENSSVLG00005002726) #24	ENSSVLG00005002763 #26	RGS10 (ENSSVLG00005002843) #27	GRK5 (ENSSVLG00005002880)	PRDX3 (ENSSVLG00005002921)	SFXN4 (ENSSVLG00005002960)	DENND10 (ENSSVLG00005003022)	EIF3A (ENSSVLG00005003063)	NANOS1 (ENSSVLG00005003114)	CACUL1 (ENSSVLG00005003130)	PRLHR (ENSSVLG00005003161)	ENSSVLG00005003176	ENSSVLG00005003202	RAB11FIP2 (ENSSVLG00005003229)
Lagomorpha	ANCESTRAL SPECIES	17					ENSGT00950000183145.E #7	ENSGT00940000156955 #9	ENSGT00940000155157 #10	ENSGT00940000161718 #11	ENSGT00940000157052 #12	ENSGT00390000011476 #13	ENSGT00500000044926 #15	ENSGT00940000155447 #16	ENSGT00390000004068 #18	ENSGT00940000158288 #20	ENSGT00940000156602 #21	ENSGT00390000017265 #22	ENSGT00940000155996 #23	ENSGT00940000159204 #24	ENSGT00940000160482 #26	ENSGT00940000161426 #27	ENSGT00940000160702.b	ENSGT00940000153430.a.b	ENSGT01030000234641.a.b	ENSGT00390000014431	ENSGT00730000111063	ENSGT00390000000403	ENSGT00940000162008	ENSGT00390000008978	ENSGT00940000158482	ENSGT00940000157425.B	ENSGT00390000017746
Rabbit	MODERN SPECIES	9	C10orf120 (ENSOCUG00000006564)	ENSOCUG00000032261	ENSOCUG00000013488 #7	HTRA1 (ENSOCUG00000013478) #9	PLEKHA1 (ENSOCUG00000002100) #10	BTBD16 (ENSOCUG00000000825) #11	ENSOCUG00000000821 #12	ENSOCUG00000026111 #12	NSMCE4A (ENSOCUG00000000820) #13	ATE1 (ENSOCUG00000003373) #15	FGFR2 (ENSOCUG00000007069) #16	ENSOCUG00000001764	WDR11 (ENSOCUG00000013912) #18	ENSOCUG00000017933 #20	SEC23IP (ENSOCUG00000003141) #21	MCMBP (ENSOCUG00000002235) #22	INPP5F (ENSOCUG00000002226) #23	BAG3 (ENSOCUG00000011696) #24	TIAL1 (ENSOCUG00000003783) #26	RGS10 (ENSOCUG00000014618) #27	ENSOCUG00000035399	ENSOCUG00000036390	ENSOCUG00000017334	SFXN4 (ENSOCUG00000005006)	DENND10 (ENSOCUG00000005001)	EIF3A (ENSOCUG00000004996)	CACUL1 (ENSOCUG00000015521)	PRLHR (ENSOCUG00000008663)	ENSOCUG00000005150	RAB11FIP2 (ENSOCUG00000009241)	EMX2 (ENSOCUG00000012088)
Pika	MODERN SPECIES	4509																MCMBP (ENSOPRG00000017344) #22	INPP5F (ENSOPRG00000017343) #23