Mus	ANCESTRAL SPECIES	17	ENSGT00940000162095	ENSGT00940000154762.a.b #10	ENSGT00530000063975	ENSGT00390000009243	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000163436.n.b #16	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823 #24	ENSGT00940000156014 #25	ENSGT00940000159212.a #26	ENSGT01080000259406 #27	ENSGT00510000047059.l #28	ENSGT00390000008135 #29	ENSGT00940000153883.b #30	ENSGT00940000154540.a #31	ENSGT00940000161327 #32	ENSGT00390000006030.d.a.b #33	ENSGT00390000014189 #34	ENSGT00950000183122.B #35	ENSGT00390000001752 #36	ENSGT00940000157044
Shrew mouse	MODERN SPECIES	15	Zfp11 (MGP_PahariEiJ_G0024362) #7	Septin14 (MGP_PahariEiJ_G0024363) #8	MGP_PahariEiJ_G0024364 #9	MGP_PahariEiJ_G0024365 #10	Eln (MGP_PahariEiJ_G0024366) #11	Limk1 (MGP_PahariEiJ_G0024367) #12	Eif4h (MGP_PahariEiJ_G0024368) #13	Lat2 (MGP_PahariEiJ_G0024369) #14	Rfc2 (MGP_PahariEiJ_G0024370) #15	Syna (MGP_PahariEiJ_G0024371) #16	Clip2 (MGP_PahariEiJ_G0024372) #17	Gtf2ird1 (MGP_PahariEiJ_G0024373) #18	Gtf2i (MGP_PahariEiJ_G0024374) #19	Ncf1 (MGP_PahariEiJ_G0024375) #20	Gtf2ird2 (MGP_PahariEiJ_G0024376) #21	Rcc1l (MGP_PahariEiJ_G0024377) #22	Castor2 (MGP_PahariEiJ_G0024378) #23	MGP_PahariEiJ_G0024379 #24	Galnt17 (MGP_PahariEiJ_G0024380) #25	Caln1 (MGP_PahariEiJ_G0024381) #26	MGP_PahariEiJ_G0024382 #27	Tyw1 (MGP_PahariEiJ_G0024383) #28	Sbds (MGP_PahariEiJ_G0024384) #29	Tmem248 (MGP_PahariEiJ_G0024385) #30	Rabgef1 (MGP_PahariEiJ_G0024386) #31	Kctd7 (MGP_PahariEiJ_G0024387) #32	Tpst1 (MGP_PahariEiJ_G0024388) #33	Crcp (MGP_PahariEiJ_G0024389) #34	Asl (MGP_PahariEiJ_G0024390) #35	Gusb (MGP_PahariEiJ_G0024391) #36	Nupr1l (MGP_PahariEiJ_G0024392) #37
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000162095	ENSGT00940000154762.a.b #10	ENSGT00530000063975	ENSGT00390000009243	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000163436.n.b #16	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823 #24	ENSGT00940000156014 #25	ENSGT00940000159212.a #26	ENSGT01080000259406 #27	ENSGT00510000047059.l #28	ENSGT00390000008135 #29	ENSGT00940000153883.b #30	ENSGT00940000154540.a #31	ENSGT00940000161327 #32	ENSGT00390000006030.d.a.b #33	ENSGT00390000014189 #34	ENSGT00950000183122.B #35	ENSGT00390000001752 #36	ENSGT00940000157044
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000162095	ENSGT00940000154762.a.b #10	ENSGT00530000063975	ENSGT00390000009243	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000163436.n.b #16	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823 #24	ENSGT00940000156014 #25	ENSGT00940000159212.a #26	ENSGT00510000047059.l #28	ENSGT00390000008135 #29	ENSGT00940000153883.b #30	ENSGT00940000154540.a #31	ENSGT00940000161327 #32	ENSGT00390000006030.d.a.b #33	ENSGT00390000014189 #34	ENSGT00950000183122.B #35	ENSGT00390000001752 #36	ENSGT00940000157044	ENSGT00530000064242.b #37
Mouse	MODERN SPECIES	14	Cldn4 (ENSMUSG00000047501) #10	Mettl27 (ENSMUSG00000040557)	Cldn13 (ENSMUSG00000008843) #10	Tmem270 (ENSMUSG00000040576)	Eln (ENSMUSG00000029675) #11	Limk1 (ENSMUSG00000029674) #12	Eif4h (ENSMUSG00000040731) #13	Lat2 (ENSMUSG00000040751) #14	Rfc2 (ENSMUSG00000023104) #15	Syna (ENSMUSG00000085957) #16	Clip2 (ENSMUSG00000063146) #17	Gtf2ird1 (ENSMUSG00000023079) #18	Gtf2i (ENSMUSG00000060261) #19	Ncf1 (ENSMUSG00000015950) #20	Gtf2ird2 (ENSMUSG00000015942) #21	Rcc1l (ENSMUSG00000061979) #22	Castor2 (ENSMUSG00000015944) #23	Auts2 (ENSMUSG00000029673) #24	Galnt17 (ENSMUSG00000034040) #25	Caln1 (ENSMUSG00000060371) #26	Tyw1 (ENSMUSG00000056310) #28	Sbds (ENSMUSG00000025337) #29	Tmem248 (ENSMUSG00000053094) #30	Rabgef1 (ENSMUSG00000025340) #31	Kctd7 (ENSMUSG00000034110) #32	Tpst1 (ENSMUSG00000034118) #33	Crcp (ENSMUSG00000025532) #34	Asl (ENSMUSG00000025533) #35	Gusb (ENSMUSG00000025534) #36	Vkorc1l1 (ENSMUSG00000066735)	Nupr1l (ENSMUSG00000095789) #37
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000162095	ENSGT00940000154762.a.b #10	ENSGT00530000063975	ENSGT00390000009243	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000163436.n.b #16	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823 #24	ENSGT00940000156014 #25	ENSGT00940000159212.a #26	ENSGT01080000259529	ENSGT00510000047059.l #28	ENSGT00390000008135.y #29	ENSGT00940000153883.b #30	ENSGT00940000154540.a #31	ENSGT00940000161327 #32	ENSGT00390000006030.d.a.b #33	ENSGT00390000014189 #34	ENSGT00950000183122.B #35	ENSGT00390000001752 #36	ENSGT00940000157044
Steppe mouse	MODERN SPECIES	3078			Eln (ENSMSIG00000017355) #11	Limk1 (ENSMSIG00000017536) #12	ENSMSIG00000017688 #13	Lat2 (ENSMSIG00000017724) #14	Rfc2 (ENSMSIG00000017808) #15	ENSMSIG00000017829	Syna (ENSMSIG00000017841) #16	Clip2 (ENSMSIG00000017848) #17	ENSMSIG00000017890	Gtf2ird1 (ENSMSIG00000017905) #18	Gtf2i (ENSMSIG00000018304) #19	Ncf1 (ENSMSIG00000019838) #20	Gtf2ird2 (ENSMSIG00000019862) #21	Rcc1l (ENSMSIG00000019888) #22	ENSMSIG00000019903	Castor2 (ENSMSIG00000019905) #23
spretus	MODERN SPECIES	14	Cldn4 (MGP_SPRETEiJ_G0028820) #10	Mettl27 (MGP_SPRETEiJ_G0028819)	Cldn13 (MGP_SPRETEiJ_G0028818) #10	Tmem270 (MGP_SPRETEiJ_G0028817)	Eln (MGP_SPRETEiJ_G0028816) #11	Limk1 (MGP_SPRETEiJ_G0028815) #12	Eif4h (MGP_SPRETEiJ_G0028814) #13	Lat2 (MGP_SPRETEiJ_G0028813) #14	Rfc2 (MGP_SPRETEiJ_G0028812) #15	Syna (MGP_SPRETEiJ_G0028811) #16	Clip2 (MGP_SPRETEiJ_G0028810) #17	Gtf2ird1 (MGP_SPRETEiJ_G0028809) #18	Gtf2i (MGP_SPRETEiJ_G0028808) #19	Ncf1 (MGP_SPRETEiJ_G0028807) #20	Gtf2ird2 (MGP_SPRETEiJ_G0028806) #21	Rcc1l (MGP_SPRETEiJ_G0028805) #22	Castor2 (MGP_SPRETEiJ_G0028804) #23	Auts2 (MGP_SPRETEiJ_G0028803) #24	Galnt17 (MGP_SPRETEiJ_G0028802) #25	MGP_SPRETEiJ_G0028801	Caln1 (MGP_SPRETEiJ_G0028800) #26	Tyw1 (MGP_SPRETEiJ_G0028799) #28	Sbds (MGP_SPRETEiJ_G0028798) #29	Tmem248 (MGP_SPRETEiJ_G0028797) #30	Rabgef1 (MGP_SPRETEiJ_G0028796) #31	Kctd7 (MGP_SPRETEiJ_G0028795) #32	Tpst1 (MGP_SPRETEiJ_G0028794) #33	Crcp (MGP_SPRETEiJ_G0028793) #34	Asl (MGP_SPRETEiJ_G0028792) #35	Gusb (MGP_SPRETEiJ_G0028791) #36	Vkorc1l1 (MGP_SPRETEiJ_G0028790)
Ryukyu mouse	MODERN SPECIES	14	Cldn3 (MGP_CAROLIEiJ_G0027822)	Cldn4 (MGP_CAROLIEiJ_G0027821) #10	Cldn13 (MGP_CAROLIEiJ_G0027820) #10	Tmem270 (MGP_CAROLIEiJ_G0027819)	Eln (MGP_CAROLIEiJ_G0027818) #11	Limk1 (MGP_CAROLIEiJ_G0027817) #12	Eif4h (MGP_CAROLIEiJ_G0027816) #13	Lat2 (MGP_CAROLIEiJ_G0027815) #14	Rfc2 (MGP_CAROLIEiJ_G0027814) #15	Syna (MGP_CAROLIEiJ_G0027813) #16	Clip2 (MGP_CAROLIEiJ_G0027812) #17	Gtf2ird1 (MGP_CAROLIEiJ_G0027811) #18	Gtf2i (MGP_CAROLIEiJ_G0027810) #19	Ncf1 (MGP_CAROLIEiJ_G0027809) #20	Gtf2ird2 (MGP_CAROLIEiJ_G0027808) #21	Rcc1l (MGP_CAROLIEiJ_G0027807) #22	Castor2 (MGP_CAROLIEiJ_G0027806) #23	Auts2 (MGP_CAROLIEiJ_G0027805) #24	Galnt17 (MGP_CAROLIEiJ_G0027804) #25	MGP_CAROLIEiJ_G0027803 #27	Caln1 (MGP_CAROLIEiJ_G0027802) #26	Tyw1 (MGP_CAROLIEiJ_G0027801) #28	Sbds (MGP_CAROLIEiJ_G0027800) #29	Tmem248 (MGP_CAROLIEiJ_G0027799) #30	Rabgef1 (MGP_CAROLIEiJ_G0027798) #31	Kctd7 (MGP_CAROLIEiJ_G0027797) #32	Tpst1 (MGP_CAROLIEiJ_G0027796) #33	Crcp (MGP_CAROLIEiJ_G0027795) #34	Asl (MGP_CAROLIEiJ_G0027794) #35	Gusb (MGP_CAROLIEiJ_G0027793) #36	Vkorc1l1 (MGP_CAROLIEiJ_G0027792)