Chordata	ANCESTRAL SPECIES																	ENSGT00940000157317 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000157317 #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000157317 #22
Euteleostomi	ANCESTRAL SPECIES	369															ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00390000009061	ENSGT00390000017214	ENSGT00940000176149	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000165416
Sarcopterygii	ANCESTRAL SPECIES	513															ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000160349 #19	ENSGT00940000159414 #18	ENSGT00940000159426 #17
Tetrapoda	ANCESTRAL SPECIES	13	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00550000075050 #15	ENSGT00940000161621.A.a.b.a.m	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339	ENSGT00390000008983.b	ENSGT00940000162897	ENSGT00940000158139
Amniota	ANCESTRAL SPECIES	18	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000161621.A.a.b.a.m	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339	ENSGT00390000008983.b	ENSGT00940000162897	ENSGT00940000158139	ENSGT00440000038159
Mammalia	ANCESTRAL SPECIES	37	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000161621.A.a.b.a.m	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339	ENSGT00940000162897	ENSGT00940000158139	ENSGT00440000038159	ENSGT00530000064242.b
Theria	ANCESTRAL SPECIES	43	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000161621.A.a.b.a.m	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000154631	ENSGT00940000162897	ENSGT00940000158139	ENSGT00440000038159	ENSGT00530000064242.b
Eutheria	ANCESTRAL SPECIES	22	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00530000064242.b
Boreoeutheria	ANCESTRAL SPECIES	12	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Euarchontoglires	ANCESTRAL SPECIES	12	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752
Primates	ANCESTRAL SPECIES	11	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Strepsirrhini	ANCESTRAL SPECIES	14	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135.eb	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00530000064242.b
Lemuriformes	ANCESTRAL SPECIES	6	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135.eb	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00970000193421.C.b.e.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Mouse lemur	MODERN SPECIES	8	STX1A (ENSMICG00000008224) #7	ABHD11 (ENSMICG00000007909) #8	METTL27 (ENSMICG00000006448) #9	TMEM270 (ENSMICG00000006456) #10	ENSMICG00000045863 #11	LIMK1 (ENSMICG00000016193) #12	EIF4H (ENSMICG00000010204) #13	LAT2 (ENSMICG00000042618) #14	RFC2 (ENSMICG00000010212) #15	ENSMICG00000028111 #16	CLIP2 (ENSMICG00000010219) #17	GTF2IRD1 (ENSMICG00000010230) #18	GTF2I (ENSMICG00000014877) #19	NCF1 (ENSMICG00000014903) #20	ENSMICG00000014913 #21	RCC1L (ENSMICG00000015336) #22	CASTOR2 (ENSMICG00000015328) #23	MTARC2 (ENSMICG00000044174) #24	MTARC1 (ENSMICG00000011423) #25	HLX (ENSMICG00000028264) #26	DUSP10 (ENSMICG00000037572) #27	ENSMICG00000028808 #28	TAF1A (ENSMICG00000032953) #29	MIA3 (ENSMICG00000017165) #30	AIDA (ENSMICG00000017177) #31	BROX (ENSMICG00000017180) #32	ENSMICG00000037814 #33	DISP1 (ENSMICG00000033846) #34	SUSD4 (ENSMICG00000004902) #35	ENSMICG00000029336 #36	ENSMICG00000027054 #37
Lemuriformes_a	ANCESTRAL SPECIES	14	ENSGT01030000234627.a.a.c #7	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135.eb	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00970000193421.C.b.e.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Coquerels sifaka	MODERN SPECIES	192	BUD23 (ENSPCOG00000014934)	STX1A (ENSPCOG00000027030) #7	ABHD11 (ENSPCOG00000014894) #8	METTL27 (ENSPCOG00000020860) #9	TMEM270 (ENSPCOG00000023283) #10	LIMK1 (ENSPCOG00000020294) #12	EIF4H (ENSPCOG00000024907) #13	LAT2 (ENSPCOG00000017187) #14	RFC2 (ENSPCOG00000027048) #15	CLIP2 (ENSPCOG00000022154) #17	GTF2IRD1 (ENSPCOG00000017596) #18	GTF2I (ENSPCOG00000022921) #19	NCF1 (ENSPCOG00000015082) #20	ENSPCOG00000023746 #21	ENSPCOG00000018327	RCC1L (ENSPCOG00000026846) #22	CASTOR2 (ENSPCOG00000018780) #23	ENSPCOG00000004450	AUTS2 (ENSPCOG00000024730)	ENSPCOG00000026527	ENSPCOG00000027902	GALNT17 (ENSPCOG00000004671)	CALN1 (ENSPCOG00000027421)	ENSPCOG00000015294	ENSPCOG00000023136	SBDS (ENSPCOG00000021098)	TMEM248 (ENSPCOG00000016391)	RABGEF1 (ENSPCOG00000024294)	ENSPCOG00000019247	KCTD7 (ENSPCOG00000027726)	TPST1 (ENSPCOG00000021376)
Greater bamboo lemur	MODERN SPECIES	141	ABHD11 (ENSPSMG00000019974) #8	CLDN3 (ENSPSMG00000019957)	CLDN4 (ENSPSMG00000019945)	METTL27 (ENSPSMG00000019931) #9	TMEM270 (ENSPSMG00000019924) #10	LIMK1 (ENSPSMG00000019894) #12	ENSPSMG00000019769 #13	RFC2 (ENSPSMG00000019687) #15	CLIP2 (ENSPSMG00000019609) #17	GTF2IRD1 (ENSPSMG00000019493) #18	GTF2I (ENSPSMG00000018386) #19	NCF1 (ENSPSMG00000017732) #20	ENSPSMG00000017727 #21	ENSPSMG00000017715	ENSPSMG00000017714	RCC1L (ENSPSMG00000017683) #22	CASTOR2 (ENSPSMG00000017649) #23
Bushbaby	MODERN SPECIES	192	ABHD11 (ENSOGAG00000002925) #8	CLDN3 (ENSOGAG00000033364)	CLDN4 (ENSOGAG00000010344)	METTL27 (ENSOGAG00000010347) #9	TMEM270 (ENSOGAG00000010349) #10	LIMK1 (ENSOGAG00000013239) #12	EIF4H (ENSOGAG00000028051) #13	LAT2 (ENSOGAG00000014918) #14	RFC2 (ENSOGAG00000014927) #15	CLIP2 (ENSOGAG00000014933) #17	ENSOGAG00000029382	GTF2IRD1 (ENSOGAG00000013029) #18	GTF2I (ENSOGAG00000029837) #19	NCF1 (ENSOGAG00000027357) #20	ENSOGAG00000000844 #21	RCC1L (ENSOGAG00000033082) #22	CASTOR2 (ENSOGAG00000009666) #23	ENSOGAG00000027961	ENSOGAG00000030033	ENSOGAG00000004276	GALNT17 (ENSOGAG00000002140)	CALN1 (ENSOGAG00000002143)	ENSOGAG00000016555	ENSOGAG00000009011	TMEM248 (ENSOGAG00000009008)	RABGEF1 (ENSOGAG00000008166)	TPST1 (ENSOGAG00000013309)	ENSOGAG00000030645	CRCP (ENSOGAG00000001914)	ASL (ENSOGAG00000026947)	GUSB (ENSOGAG00000011598)
Haplorrhini	ANCESTRAL SPECIES	26	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Tarsier	MODERN SPECIES	6099														NCF1 (ENSTSYG00000028041) #20	ENSTSYG00000027785 #21	RCC1L (ENSTSYG00000026092) #22	CASTOR2 (ENSTSYG00000027475) #23
Simiiformes	ANCESTRAL SPECIES	26	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00910000147828	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00770000121804	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00940000175200	ENSGT00940000164280	ENSGT01100000263507.D.a.a.b.b.b.a
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00910000147828	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00770000121804	ENSGT00940000157317 #22	ENSGT00390000006208.a.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752.y.a	ENSGT00940000157044.j	ENSGT01100000263507.D.a.b.a.b
Hominidae	ANCESTRAL SPECIES	11	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00910000147828	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00770000121804	ENSGT00940000157317 #22	ENSGT00390000006208.a.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752.y.b	ENSGT00940000175200	ENSGT00940000164280
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	25	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414.b.a #18	ENSGT00940000160349 #19	ENSGT00910000147828	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.b.a #23
Homo/Pan group	ANCESTRAL SPECIES	24	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414.a #18	ENSGT00940000160349 #19	ENSGT00910000147828	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.a #23	ENSGT00940000154173.A.a.c.a.b.a.a.a.a.b.a.b	ENSGT00940000153594.d.j	ENSGT01100000263482.A.b	ENSGT01100000263482.E	ENSGT00390000000699	ENSGT00940000156847	ENSGT00390000007848.a	ENSGT00390000010113	ENSGT00390000016686.n	ENSGT00940000162625	ENSGT00940000155882.a.a	ENSGT01090000260061.c.a.c.a	ENSGT00940000160521	ENSGT01030000234567.B.b.i
Pan	ANCESTRAL SPECIES	41	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414.b.a #18	ENSGT00940000160349 #19	ENSGT00910000147828	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.a #23	ENSGT00940000153594.d.i.b	ENSGT01100000263482.A.b	ENSGT01100000263482.E	ENSGT00390000000699	ENSGT00940000156847	ENSGT00390000007848.a	ENSGT00390000010113	ENSGT00390000016686.n	ENSGT00940000154540.a.n.b.b
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	20	CLDN3 (ENSPTRG00000028539)	ENSPTRG00000051682	METTL27 (ENSPTRG00000019281) #9	TMEM270 (ENSPTRG00000019282) #10	ELN (ENSPTRG00000019283) #11	LIMK1 (ENSPTRG00000019286) #12	EIF4H (ENSPTRG00000019287) #13	LAT2 (ENSPTRG00000019288) #14	RFC2 (ENSPTRG00000019289) #15	CLIP2 (ENSPTRG00000019290) #17	GTF2IRD1 (ENSPTRG00000019292) #18	ENSPTRG00000051924	GTF2I (ENSPTRG00000019293) #19	NCF1 (ENSPTRG00000019294) #20	ENSPTRG00000019295 #21	RCC1L (ENSPTRG00000019298) #22	CASTOR2 (ENSPTRG00000019301) #23	ENSPTRG00000049081	ENSPTRG00000051569	ENSPTRG00000046177	ENSPTRG00000050284	ENSPTRG00000019329	ENSPTRG00000044131	ENSPTRG00000045444	ENSPTRG00000028446	ENSPTRG00000050878	ENSPTRG00000048762	ENSPTRG00000049238	ENSPTRG00000051058	ENSPTRG00000048615	ENSPTRG00000045409
Chimpanzee	MODERN SPECIES	565	ENSPTRG00000042699	ENSPTRG00000044695 #9	ENSPTRG00000049472 #10	ENSPTRG00000045946 #12	ENSPTRG00000046154 #13	ENSPTRG00000044779 #14	ENSPTRG00000045637 #15	ENSPTRG00000050476 #17	ENSPTRG00000045395 #18	ENSPTRG00000045821	ENSPTRG00000048479 #19	ENSPTRG00000044867 #20	ENSPTRG00000043124 #21	ENSPTRG00000051322	ENSPTRG00000049139 #23	ENSPTRG00000042794 #22
Bonobo	MODERN SPECIES	20	CLDN3 (ENSPPAG00000010463)	CLDN4 (ENSPPAG00000026785)	METTL27 (ENSPPAG00000038843) #9	TMEM270 (ENSPPAG00000038658) #10	ENSPPAG00000041530 #11	LIMK1 (ENSPPAG00000040501) #12	EIF4H (ENSPPAG00000032449) #13	LAT2 (ENSPPAG00000034718) #14	RFC2 (ENSPPAG00000040698) #15	CLIP2 (ENSPPAG00000040459) #17	GTF2IRD1 (ENSPPAG00000034035) #18	GTF2I (ENSPPAG00000033441) #19	ENSPPAG00000041734	NCF1 (ENSPPAG00000031779) #20	ENSPPAG00000031460 #21	RCC1L (ENSPPAG00000030223) #22	CASTOR2 (ENSPPAG00000021721) #23	ENSPPAG00000027252	CCL26 (ENSPPAG00000042736)	CCL24 (ENSPPAG00000028650)	RHBDD2 (ENSPPAG00000036662)	POR (ENSPPAG00000037718)	TMEM120A (ENSPPAG00000034408)	STYXL1 (ENSPPAG00000036397)	MDH2 (ENSPPAG00000033841)	ENSPPAG00000043377	HSPB1 (ENSPPAG00000037757)	ENSPPAG00000041078	ENSPPAG00000007420	ZP3 (ENSPPAG00000041144)	CCDC146 (ENSPPAG00000043413)
Human	MODERN SPECIES	19	MDH2 (ENSG00000146701)	STYXL1 (ENSG00000127952)	TMEM120A (ENSG00000189077)	POR (ENSG00000127948)	RHBDD2 (ENSG00000005486)	CCL24 (ENSG00000106178)	CCL26 (ENSG00000006606)	HIP1 (ENSG00000127946)	SPDYE5 (ENSG00000170092)	POM121C (ENSG00000272391)	TRIM73 (ENSG00000178809)	SPDYE15 (ENSG00000286014)	SPDYE14 (ENSG00000286137)	SPDYE13 (ENSG00000286038)	GTF2IRD2B (ENSG00000174428) #21	RCC1L (ENSG00000274523) #22	CASTOR2 (ENSG00000274070) #23	SPDYE12 (ENSG00000184616)	GTF2IRD2 (ENSG00000196275) #21	ENSG00000289346	NCF1 (ENSG00000158517) #20	GTF2I (ENSG00000263001) #19	GTF2IRD1 (ENSG00000006704) #18	CLIP2 (ENSG00000106665) #17	RFC2 (ENSG00000049541) #15	LAT2 (ENSG00000086730) #14	EIF4H (ENSG00000106682) #13	LIMK1 (ENSG00000106683) #12	ELN (ENSG00000049540) #11	TMEM270 (ENSG00000175877) #10	METTL27 (ENSG00000165171) #9
Gorilla	MODERN SPECIES	20	MDH2 (ENSGGOG00000011790)	STYXL1 (ENSGGOG00000014256)	TMEM120A (ENSGGOG00000026408)	ENSGGOG00000041192	POR (ENSGGOG00000005876)	RHBDD2 (ENSGGOG00000016935)	ENSGGOG00000004845	HIP1 (ENSGGOG00000016310)	ENSGGOG00000041636	POM121C (ENSGGOG00000011716)	ENSGGOG00000043878	NSUN5 (ENSGGOG00000011730)	ENSGGOG00000015742	ENSGGOG00000002980 #23	ENSGGOG00000040630 #21	RCC1L (ENSGGOG00000016055) #22	ENSGGOG00000025208 #23	ENSGGOG00000023819	ENSGGOG00000037222 #20	ENSGGOG00000039118	ENSGGOG00000028316 #19	GTF2IRD1 (ENSGGOG00000000419) #18	CLIP2 (ENSGGOG00000010621) #17	RFC2 (ENSGGOG00000025281) #15	LAT2 (ENSGGOG00000034858) #14	EIF4H (ENSGGOG00000005284) #13	LIMK1 (ENSGGOG00000003078) #12	ENSGGOG00000037197 #11	TMEM270 (ENSGGOG00000005707) #10	METTL27 (ENSGGOG00000011806) #9	CLDN4 (ENSGGOG00000036182)
Orangutan	MODERN SPECIES	20	CLDN3 (ENSPPYG00000017494)	METTL27 (ENSPPYG00000017492) #9	ENSPPYG00000017491 #10	ENSPPYG00000005438	LIMK1 (ENSPPYG00000017490) #12	EIF4H (ENSPPYG00000017489) #13	LAT2 (ENSPPYG00000017488) #14	ENSPPYG00000032014	RFC2 (ENSPPYG00000017487) #15	CLIP2 (ENSPPYG00000017486) #17	GTF2IRD1 (ENSPPYG00000017485) #18	GTF2I (ENSPPYG00000017484) #19	NCF1 (ENSPPYG00000017509) #20	ENSPPYG00000017480 #21	ENSPPYG00000031822	ENSPPYG00000017481 #22	CASTOR2 (ENSPPYG00000017483) #23	ENSPPYG00000036519	AUTS2 (ENSPPYG00000031465)	GALNT17 (ENSPPYG00000036800)	CALN1 (ENSPPYG00000017516)	ENSPPYG00000017517	TYW1 (ENSPPYG00000017514)	SBDS (ENSPPYG00000017513)	TMEM248 (ENSPPYG00000036611)	ENSPPYG00000019927	RABGEF1 (ENSPPYG00000017520)	KCTD7 (ENSPPYG00000031460)	TPST1 (ENSPPYG00000017524)	ENSPPYG00000017525	ASL (ENSPPYG00000017526)
Gibbon	MODERN SPECIES	7	ENSNLEG00000030211	ENSNLEG00000030764	ENSNLEG00000032186 #7	ABHD11 (ENSNLEG00000029358) #8	CLDN3 (ENSNLEG00000030943)	CLDN4 (ENSNLEG00000018699)	METTL27 (ENSNLEG00000008849) #9	ENSNLEG00000030192 #10	ENSNLEG00000008838 #13	LAT2 (ENSNLEG00000008776) #14	RFC2 (ENSNLEG00000034656) #15	CLIP2 (ENSNLEG00000008755) #17	GTF2IRD1 (ENSNLEG00000033027) #18	GTF2I (ENSNLEG00000008741) #19	ENSNLEG00000029470	ENSNLEG00000008724 #22	ENSNLEG00000008721 #23	ENSNLEG00000011723	ENSNLEG00000029402	NSUN5 (ENSNLEG00000008648)	ENSNLEG00000008638	ENSNLEG00000034874	ENSNLEG00000028458	HIP1 (ENSNLEG00000008590)	CCL26 (ENSNLEG00000008580)	CCL24 (ENSNLEG00000008565)	ENSNLEG00000028998	POR (ENSNLEG00000008503)	ENSNLEG00000008492	STYXL1 (ENSNLEG00000008461)	MDH2 (ENSNLEG00000008444)
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00910000147828	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00770000121804	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752.`b	ENSGT00940000175200	ENSGT00940000164280
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00910000147828	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00770000121804	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752.`b	ENSGT00940000175200	ENSGT00940000164280
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00940000154762.a.b	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00910000147424	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00910000147828	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00770000121804	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00940000157044.i.a.b	ENSGT00390000001752.`b	ENSGT00940000175200
Macaca	ANCESTRAL SPECIES	3	ENSGT00940000154762.a.b	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00910000147424	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00910000147828	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00770000121804	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752.ab.a.b	ENSGT00390000001752.ab.a.a	ENSGT00940000157044.j
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT01090000260213.b	ENSGT00940000154762.a.b	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00440000038159.p.a.f	ENSGT01100000263577.a.a.b.a.a.b.b.b.c	ENSGT01100000263539.b.a.a.a.b.b.a.b.b.a.a.a.a.b.b	ENSGT00940000163244.d.a.c.a	ENSGT00940000154823	ENSGT01100000263539.b.a.a.a.a.a.b.a.a.b.a.b	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT01100000263539.b.a.a.a.a.a.a.b.b.a.a.b	ENSGT00510000047059.l	ENSGT00390000008135.ib	ENSGT00940000153883.b	ENSGT00960000191503.c.a	ENSGT00940000154540.a
Rhesus	MODERN SPECIES	13	CLDN4 (ENSMMUG00000044653)	TMEM270 (ENSMMUG00000003440) #10	ENSMMUG00000058179	ELN (ENSMMUG00000044533) #11	LIMK1 (ENSMMUG00000003128) #12	EIF4H (ENSMMUG00000006205) #13	LAT2 (ENSMMUG00000003840) #14	RFC2 (ENSMMUG00000003843) #15	CLIP2 (ENSMMUG00000048526) #17	GTF2IRD1 (ENSMMUG00000018842) #18	ENSMMUG00000051890	GTF2I (ENSMMUG00000006823) #19	NCF1 (ENSMMUG00000007586) #20	ENSMMUG00000065259	ENSMMUG00000017270 #21	RCC1L (ENSMMUG00000001003) #22	CASTOR2 (ENSMMUG00000014804) #23	ENSMMUG00000051460	ENSMMUG00000055494	ENSMMUG00000054720	ENSMMUG00000057674	ENSMMUG00000056841	ENSMMUG00000050132	AUTS2 (ENSMMUG00000017675)	ENSMMUG00000053562	ENSMMUG00000061790	GALNT17 (ENSMMUG00000022555)	ENSMMUG00000053465	CALN1 (ENSMMUG00000001225)	ENSMMUG00000052019	ENSMMUG00000061002
Crab-eating macaque	MODERN SPECIES	13	ENSMFAG00000064205	CLDN4 (ENSMFAG00000024997)	TMEM270 (ENSMFAG00000045782) #10	ELN (ENSMFAG00000046693) #11	LIMK1 (ENSMFAG00000042014) #12	EIF4H (ENSMFAG00000031975) #13	LAT2 (ENSMFAG00000028880) #14	RFC2 (ENSMFAG00000038578) #15	ENSMFAG00000059352	ENSMFAG00000058832	CLIP2 (ENSMFAG00000030296) #17	ENSMFAG00000054470	GTF2IRD1 (ENSMFAG00000030668) #18	GTF2I (ENSMFAG00000031566) #19	NCF1 (ENSMFAG00000038102) #20	RCC1L (ENSMFAG00000021544) #22	ENSMFAG00000064616	ENSMFAG00000047186	ENSMFAG00000052852	CASTOR2 (ENSMFAG00000064546) #23	ENSMFAG00000012886	ENSMFAG00000051398	ENSMFAG00000062920	ENSMFAG00000062008	ENSMFAG00000047650	ENSMFAG00000063002	ENSMFAG00000049836	ENSMFAG00000055803	ENSMFAG00000049233	AUTS2 (ENSMFAG00000035871)	ENSMFAG00000057328
Pig-tailed macaque	MODERN SPECIES	365	TMEM270 (ENSMNEG00000032345) #10	ELN (ENSMNEG00000029369) #11	LIMK1 (ENSMNEG00000041165) #12	EIF4H (ENSMNEG00000044792) #13	LAT2 (ENSMNEG00000036788) #14	RFC2 (ENSMNEG00000034670) #15	CLIP2 (ENSMNEG00000023809) #17	ENSMNEG00000018203	GTF2IRD1 (ENSMNEG00000030643) #18	ENSMNEG00000037613 #19	ENSMNEG00000002186	ENSMNEG00000002434	NCF1 (ENSMNEG00000032957) #20	ENSMNEG00000038900 #21	ENSMNEG00000039777	RCC1L (ENSMNEG00000032364) #22	CASTOR2 (ENSMNEG00000041889) #23	AUTS2 (ENSMNEG00000014179)	ENSMNEG00000038588	ENSMNEG00000044206	CALN1 (ENSMNEG00000033085)	ENSMNEG00000041992	SBDS (ENSMNEG00000031523)	TMEM248 (ENSMNEG00000031870)	RABGEF1 (ENSMNEG00000043563)	KCTD7 (ENSMNEG00000045519)	ENSMNEG00000028205	TPST1 (ENSMNEG00000036719)	CRCP (ENSMNEG00000030945)	ASL (ENSMNEG00000040912)	VKORC1L1 (ENSMNEG00000042657)
Cercopithecinae_b	ANCESTRAL SPECIES	36	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e.d #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00910000147424	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00910000147828	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a.b	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752.`b	ENSGT00390000001752.ab.a.a	ENSGT00940000157044.j
Olive baboon	MODERN SPECIES	14	ENSPANG00000018077	STX1A (ENSPANG00000007492) #7	ABHD11 (ENSPANG00000022554) #8	CLDN3 (ENSPANG00000010305)	CLDN4 (ENSPANG00000014833)	TMEM270 (ENSPANG00000023243) #10	ENSPANG00000007491 #13	LIMK1 (ENSPANG00000010878) #12	LAT2 (ENSPANG00000018604) #14	RFC2 (ENSPANG00000011577) #15	CLIP2 (ENSPANG00000007397) #17	GTF2IRD1 (ENSPANG00000024960) #18	GTF2I (ENSPANG00000010876) #19	NCF1 (ENSPANG00000020864) #20	ENSPANG00000018076 #21	RCC1L (ENSPANG00000004975) #22	CASTOR2 (ENSPANG00000020732) #23	ENSPANG00000051244	ENSPANG00000049212	ENSPANG00000046083	ENSPANG00000038205	ENSPANG00000044381	ENSPANG00000038453	ENSPANG00000049609	AUTS2 (ENSPANG00000022191)	ENSPANG00000044376	ENSPANG00000043888	GALNT17 (ENSPANG00000019543)	CALN1 (ENSPANG00000017545)	ENSPANG00000047315	ENSPANG00000019053
Cercopithecinae_d	ANCESTRAL SPECIES	82	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e.d #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00910000147424	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00910000147828	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a.a	ENSGT00390000006051.a.a.i	ENSGT00940000161327	ENSGT00940000154540.a.b	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752.`b
Sooty mangabey	MODERN SPECIES	204	CLDN3 (ENSCATG00000020166)	CLDN4 (ENSCATG00000018299)	TMEM270 (ENSCATG00000041871) #10	ELN (ENSCATG00000030972) #11	LIMK1 (ENSCATG00000034597) #12	EIF4H (ENSCATG00000032948) #13	LAT2 (ENSCATG00000030047) #14	RFC2 (ENSCATG00000030210) #15	ENSCATG00000024095	CLIP2 (ENSCATG00000029323) #17	GTF2IRD1 (ENSCATG00000031765) #18	GTF2I (ENSCATG00000031073) #19	ENSCATG00000020492	NCF1 (ENSCATG00000003002) #20	ENSCATG00000031171 #21	RCC1L (ENSCATG00000031484) #22	CASTOR2 (ENSCATG00000031534) #23	AUTS2 (ENSCATG00000036935)	ENSCATG00000030119	GALNT17 (ENSCATG00000018595)	CALN1 (ENSCATG00000029482)	ENSCATG00000043677	SBDS (ENSCATG00000039026)	TMEM248 (ENSCATG00000008789)	RABGEF1 (ENSCATG00000029375)	ENSCATG00000029813	KCTD7 (ENSCATG00000038064)	TPST1 (ENSCATG00000034299)	CRCP (ENSCATG00000036957)	ASL (ENSCATG00000040312)	ENSCATG00000038645
Drill	MODERN SPECIES	222															ENSMLEG00000028282 #21	RCC1L (ENSMLEG00000028604) #22	CASTOR2 (ENSMLEG00000028843) #23
Vervet Monkey	MODERN SPECIES	20	ABHD11 (ENSCSAG00000018182) #8	CLDN3 (ENSCSAG00000019482)	CLDN4 (ENSCSAG00000019481)	TMEM270 (ENSCSAG00000018183) #10	ENSCSAG00000018189	LIMK1 (ENSCSAG00000018192) #12	EIF4H (ENSCSAG00000018194) #13	LAT2 (ENSCSAG00000018196) #14	RFC2 (ENSCSAG00000018199) #15	CLIP2 (ENSCSAG00000018201) #17	GTF2IRD1 (ENSCSAG00000018202) #18	GTF2I (ENSCSAG00000018227) #19	NCF1 (ENSCSAG00000018236) #20	ENSCSAG00000018260 #21	ENSCSAG00000018264	RCC1L (ENSCSAG00000018265) #22	CASTOR2 (ENSCSAG00000018266) #23	ENSCSAG00000019480	AUTS2 (ENSCSAG00000018268)	GALNT17 (ENSCSAG00000018272)	ENSCSAG00000018273	ENSCSAG00000018274	SBDS (ENSCSAG00000018275)	TMEM248 (ENSCSAG00000018277)	ENSCSAG00000018279	KCTD7 (ENSCSAG00000018280)	ENSCSAG00000018282	TPST1 (ENSCSAG00000018287)	CRCP (ENSCSAG00000018288)	ASL (ENSCSAG00000018289)	ENSCSAG00000019479
Rhinopithecus	ANCESTRAL SPECIES	57	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414.e #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23
Black snub-nosed monkey	MODERN SPECIES	1482										ENSRBIG00000043199	GTF2IRD1 (ENSRBIG00000029550) #18	GTF2I (ENSRBIG00000042504) #19	NCF1 (ENSRBIG00000001136) #20	ENSRBIG00000030170	ENSRBIG00000036483 #21	RCC1L (ENSRBIG00000038919) #22	CASTOR2 (ENSRBIG00000044309) #23	CFAP77 (ENSRBIG00000038278)	TTF1 (ENSRBIG00000033654)	SETX (ENSRBIG00000040526)	NTNG2 (ENSRBIG00000044877)	MED27 (ENSRBIG00000042484)	RAPGEF1 (ENSRBIG00000035534)	ENSRBIG00000040714	PRRT1B (ENSRBIG00000035844)	UCK1 (ENSRBIG00000029355)	POMT1 (ENSRBIG00000041158)	PRRC2B (ENSRBIG00000037068)	PLPP7 (ENSRBIG00000027211)	FAM78A (ENSRBIG00000044775)	NUP214 (ENSRBIG00000038320)
Golden snub-nosed monkey	MODERN SPECIES	2632	ABHD11 (ENSRROG00000032187) #8	CLDN3 (ENSRROG00000021693)	CLDN4 (ENSRROG00000023217)	ENSRROG00000033235 #9	TMEM270 (ENSRROG00000036406) #10	ELN (ENSRROG00000028675) #11	LIMK1 (ENSRROG00000040573) #12	ENSRROG00000039720	LAT2 (ENSRROG00000028938) #14	RFC2 (ENSRROG00000042959) #15	CLIP2 (ENSRROG00000042472) #17	GTF2IRD1 (ENSRROG00000032818) #18	GTF2I (ENSRROG00000034407) #19	NCF1 (ENSRROG00000037010) #20	ENSRROG00000045768 #21	RCC1L (ENSRROG00000033774) #22	CASTOR2 (ENSRROG00000015490) #23	ENSRROG00000007625	ENSRROG00000044433	ENSRROG00000031453	MGAT5B (ENSRROG00000038426)	MFSD11 (ENSRROG00000039936)	SRSF2 (ENSRROG00000042457)	METTL23 (ENSRROG00000033101)	JMJD6 (ENSRROG00000035170)	ENSRROG00000045281	ST6GALNAC1 (ENSRROG00000004037)	ST6GALNAC2 (ENSRROG00000036131)	PRCD (ENSRROG00000034195)	CYGB (ENSRROG00000038611)	RHBDF2 (ENSRROG00000040847)
Platyrrhini	ANCESTRAL SPECIES	19	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327.h.b	ENSGT00530000064242.b	ENSGT00940000157044	ENSGT00390000001752	ENSGT00950000183122.B	ENSGT00390000014189
Cebidae	ANCESTRAL SPECIES	24	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327.h.b	ENSGT00530000064242.b	ENSGT00940000157044	ENSGT00390000001752	ENSGT00950000183122.B	ENSGT00390000014189
Cebidae_a	ANCESTRAL SPECIES	19	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327.h.b	ENSGT00940000157044	ENSGT00390000001752	ENSGT00950000183122.B
Capuchin	MODERN SPECIES	153										ENSCCAG00000018474 #15	CLIP2 (ENSCCAG00000022607) #17	GTF2IRD1 (ENSCCAG00000020020) #18	GTF2I (ENSCCAG00000026581) #19	NCF1 (ENSCCAG00000023795) #20	ENSCCAG00000021511 #21	RCC1L (ENSCCAG00000032052) #22	CASTOR2 (ENSCCAG00000034806) #23	LSM5 (ENSCCAG00000037334)	AUTS2 (ENSCCAG00000029594)	GALNT17 (ENSCCAG00000023033)
Bolivian squirrel monkey	MODERN SPECIES	104	BUD23 (ENSSBOG00000029613)	STX1A (ENSSBOG00000035333) #7	ABHD11 (ENSSBOG00000032860) #8	CLDN4 (ENSSBOG00000012336)	METTL27 (ENSSBOG00000022381) #9	TMEM270 (ENSSBOG00000011390) #10	ELN (ENSSBOG00000034365) #11	LIMK1 (ENSSBOG00000025419) #12	EIF4H (ENSSBOG00000019472) #13	LAT2 (ENSSBOG00000017429) #14	CLIP2 (ENSSBOG00000026722) #17	GTF2IRD1 (ENSSBOG00000035098) #18	GTF2I (ENSSBOG00000035170) #19	NCF1 (ENSSBOG00000023210) #20	ENSSBOG00000029199 #21	RCC1L (ENSSBOG00000024509) #22	CASTOR2 (ENSSBOG00000021763) #23	ENSSBOG00000020684	AUTS2 (ENSSBOG00000034309)	GALNT17 (ENSSBOG00000028382)	CALN1 (ENSSBOG00000024914)	ENSSBOG00000020209	ENSSBOG00000025752	ENSSBOG00000025873	SBDS (ENSSBOG00000022460)	TMEM248 (ENSSBOG00000028906)	RABGEF1 (ENSSBOG00000024442)	VKORC1L1 (ENSSBOG00000032522)	GUSB (ENSSBOG00000032050)	ENSSBOG00000034461
Marmoset	MODERN SPECIES	11	STX1A (ENSCJAG00000016769) #7	ABHD11 (ENSCJAG00000016768) #8	CLDN3 (ENSCJAG00000016766)	CLDN4 (ENSCJAG00000021928)	METTL27 (ENSCJAG00000016763) #9	TMEM270 (ENSCJAG00000016758) #10	LIMK1 (ENSCJAG00000045813) #12	EIF4H (ENSCJAG00000019820) #13	LAT2 (ENSCJAG00000003998) #14	ENSCJAG00000003985 #15	CLIP2 (ENSCJAG00000003947) #17	GTF2IRD1 (ENSCJAG00000016131) #18	GTF2I (ENSCJAG00000016182) #19	NCF1 (ENSCJAG00000002787) #20	ENSCJAG00000002797 #21	RCC1L (ENSCJAG00000014924) #22	CASTOR2 (ENSCJAG00000014937) #23	ENSCJAG00000060558	AUTS2 (ENSCJAG00000005161)	GALNT17 (ENSCJAG00000005178)	CALN1 (ENSCJAG00000070904)	ENSCJAG00000004295	SBDS (ENSCJAG00000062813)	TMEM248 (ENSCJAG00000004278)	RABGEF1 (ENSCJAG00000004252)	KCTD7 (ENSCJAG00000004245)	NUPR2 (ENSCJAG00000041331)	VKORC1L1 (ENSCJAG00000004243)	GUSB (ENSCJAG00000033759)	ASL (ENSCJAG00000045060)	CRCP (ENSCJAG00000004225)
Mas night monkey	MODERN SPECIES	286	CLDN3 (ENSANAG00000008285)	CLDN4 (ENSANAG00000020050)	METTL27 (ENSANAG00000029628) #9	ENSANAG00000035153	TMEM270 (ENSANAG00000037309) #10	ELN (ENSANAG00000029913) #11	LIMK1 (ENSANAG00000036808) #12	EIF4H (ENSANAG00000029696) #13	LAT2 (ENSANAG00000031835) #14	RFC2 (ENSANAG00000024495) #15	CLIP2 (ENSANAG00000026974) #17	GTF2IRD1 (ENSANAG00000003109) #18	GTF2I (ENSANAG00000028511) #19	NCF1 (ENSANAG00000036351) #20	ENSANAG00000032621 #21	RCC1L (ENSANAG00000037463) #22	CASTOR2 (ENSANAG00000036952) #23	AUTS2 (ENSANAG00000037515)	GALNT17 (ENSANAG00000028781)	CALN1 (ENSANAG00000036563)	ENSANAG00000037907	ENSANAG00000037051	ENSANAG00000037501	TMEM248 (ENSANAG00000037972)	RABGEF1 (ENSANAG00000037696)	ENSANAG00000025794	VKORC1L1 (ENSANAG00000029402)	GUSB (ENSANAG00000038082)	ENSANAG00000016752	CRCP (ENSANAG00000032466)	TPST1 (ENSANAG00000030983)
Euarchontoglires_A	ANCESTRAL SPECIES	12	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00530000064242.b
Tree shrew	MODERN SPECIES	8469																RCC1L (ENSTBEG00000000618) #22
Glires	ANCESTRAL SPECIES	11	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00530000064242.b
Rodentia	ANCESTRAL SPECIES	11	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000165238	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752
Rodentia_B	ANCESTRAL SPECIES	29	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000165238	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752
Kangaroo rat	MODERN SPECIES	483	ENSDORG00000026812 #8	Cldn3 (ENSDORG00000026883)	Cldn4 (ENSDORG00000007737)	ENSDORG00000000546	Tmem270 (ENSDORG00000008287) #10	Eln (ENSDORG00000008812) #11	Limk1 (ENSDORG00000000148) #12	Eif4h (ENSDORG00000008131) #13	Rfc2 (ENSDORG00000012050) #15	Clip2 (ENSDORG00000004807) #17	Gtf2ird1 (ENSDORG00000015995) #18	Gtf2i (ENSDORG00000026097) #19	ENSDORG00000028073	Ncf1 (ENSDORG00000007647) #20	ENSDORG00000029575	Rcc1l (ENSDORG00000004705) #22	Castor2 (ENSDORG00000028235) #23	ENSDORG00000028381	ENSDORG00000006132	Galnt17 (ENSDORG00000011211)	Caln1 (ENSDORG00000026569)	Tyw1 (ENSDORG00000014772)	ENSDORG00000023902	Sbds (ENSDORG00000026218)	ENSDORG00000014767	Rabgef1 (ENSDORG00000004205)	Kctd7 (ENSDORG00000028669)	Tpst1 (ENSDORG00000007420)	Crcp (ENSDORG00000013712)	Asl (ENSDORG00000011943)	Gusb (ENSDORG00000011942)
Myomorpha	ANCESTRAL SPECIES	31	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000165238	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752
Muroidea	ANCESTRAL SPECIES	40	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000165238	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752
Muroidea_A	ANCESTRAL SPECIES	21	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000163436.n.b	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000165238	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752
Murinae	ANCESTRAL SPECIES	20	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000163436.n.b	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00530000064242.b
Mus	ANCESTRAL SPECIES	17	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000163436.n.b	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT01080000259406	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000163436.n.b	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT01080000259406	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000163436.n.b	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00530000064242.b
Mouse	MODERN SPECIES	14	Cldn4 (ENSMUSG00000047501)	Mettl27 (ENSMUSG00000040557) #9	Cldn13 (ENSMUSG00000008843)	Tmem270 (ENSMUSG00000040576) #10	Eln (ENSMUSG00000029675) #11	Limk1 (ENSMUSG00000029674) #12	Eif4h (ENSMUSG00000040731) #13	Lat2 (ENSMUSG00000040751) #14	Rfc2 (ENSMUSG00000023104) #15	Syna (ENSMUSG00000085957)	Clip2 (ENSMUSG00000063146) #17	Gtf2ird1 (ENSMUSG00000023079) #18	Gtf2i (ENSMUSG00000060261) #19	Ncf1 (ENSMUSG00000015950) #20	Gtf2ird2 (ENSMUSG00000015942) #21	Rcc1l (ENSMUSG00000061979) #22	Castor2 (ENSMUSG00000015944) #23	Auts2 (ENSMUSG00000029673)	Galnt17 (ENSMUSG00000034040)	Caln1 (ENSMUSG00000060371)	Tyw1 (ENSMUSG00000056310)	Sbds (ENSMUSG00000025337)	Tmem248 (ENSMUSG00000053094)	Rabgef1 (ENSMUSG00000025340)	Kctd7 (ENSMUSG00000034110)	Tpst1 (ENSMUSG00000034118)	Crcp (ENSMUSG00000025532)	Asl (ENSMUSG00000025533)	Gusb (ENSMUSG00000025534)	Vkorc1l1 (ENSMUSG00000066735)	Nupr1l (ENSMUSG00000095789)
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000163436.n.b	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT01080000259529	ENSGT00510000047059.l	ENSGT00390000008135.y	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Steppe mouse	MODERN SPECIES	3078			Eln (ENSMSIG00000017355) #11	Limk1 (ENSMSIG00000017536) #12	ENSMSIG00000017688 #13	Lat2 (ENSMSIG00000017724) #14	Rfc2 (ENSMSIG00000017808) #15	ENSMSIG00000017829	Syna (ENSMSIG00000017841)	Clip2 (ENSMSIG00000017848) #17	ENSMSIG00000017890	Gtf2ird1 (ENSMSIG00000017905) #18	Gtf2i (ENSMSIG00000018304) #19	Ncf1 (ENSMSIG00000019838) #20	Gtf2ird2 (ENSMSIG00000019862) #21	Rcc1l (ENSMSIG00000019888) #22	ENSMSIG00000019903	Castor2 (ENSMSIG00000019905) #23
spretus	MODERN SPECIES	14	Cldn4 (MGP_SPRETEiJ_G0028820)	Mettl27 (MGP_SPRETEiJ_G0028819) #9	Cldn13 (MGP_SPRETEiJ_G0028818)	Tmem270 (MGP_SPRETEiJ_G0028817) #10	Eln (MGP_SPRETEiJ_G0028816) #11	Limk1 (MGP_SPRETEiJ_G0028815) #12	Eif4h (MGP_SPRETEiJ_G0028814) #13	Lat2 (MGP_SPRETEiJ_G0028813) #14	Rfc2 (MGP_SPRETEiJ_G0028812) #15	Syna (MGP_SPRETEiJ_G0028811)	Clip2 (MGP_SPRETEiJ_G0028810) #17	Gtf2ird1 (MGP_SPRETEiJ_G0028809) #18	Gtf2i (MGP_SPRETEiJ_G0028808) #19	Ncf1 (MGP_SPRETEiJ_G0028807) #20	Gtf2ird2 (MGP_SPRETEiJ_G0028806) #21	Rcc1l (MGP_SPRETEiJ_G0028805) #22	Castor2 (MGP_SPRETEiJ_G0028804) #23	Auts2 (MGP_SPRETEiJ_G0028803)	Galnt17 (MGP_SPRETEiJ_G0028802)	MGP_SPRETEiJ_G0028801	Caln1 (MGP_SPRETEiJ_G0028800)	Tyw1 (MGP_SPRETEiJ_G0028799)	Sbds (MGP_SPRETEiJ_G0028798)	Tmem248 (MGP_SPRETEiJ_G0028797)	Rabgef1 (MGP_SPRETEiJ_G0028796)	Kctd7 (MGP_SPRETEiJ_G0028795)	Tpst1 (MGP_SPRETEiJ_G0028794)	Crcp (MGP_SPRETEiJ_G0028793)	Asl (MGP_SPRETEiJ_G0028792)	Gusb (MGP_SPRETEiJ_G0028791)	Vkorc1l1 (MGP_SPRETEiJ_G0028790)
Ryukyu mouse	MODERN SPECIES	14	Cldn3 (MGP_CAROLIEiJ_G0027822)	Cldn4 (MGP_CAROLIEiJ_G0027821)	Cldn13 (MGP_CAROLIEiJ_G0027820)	Tmem270 (MGP_CAROLIEiJ_G0027819) #10	Eln (MGP_CAROLIEiJ_G0027818) #11	Limk1 (MGP_CAROLIEiJ_G0027817) #12	Eif4h (MGP_CAROLIEiJ_G0027816) #13	Lat2 (MGP_CAROLIEiJ_G0027815) #14	Rfc2 (MGP_CAROLIEiJ_G0027814) #15	Syna (MGP_CAROLIEiJ_G0027813)	Clip2 (MGP_CAROLIEiJ_G0027812) #17	Gtf2ird1 (MGP_CAROLIEiJ_G0027811) #18	Gtf2i (MGP_CAROLIEiJ_G0027810) #19	Ncf1 (MGP_CAROLIEiJ_G0027809) #20	Gtf2ird2 (MGP_CAROLIEiJ_G0027808) #21	Rcc1l (MGP_CAROLIEiJ_G0027807) #22	Castor2 (MGP_CAROLIEiJ_G0027806) #23	Auts2 (MGP_CAROLIEiJ_G0027805)	Galnt17 (MGP_CAROLIEiJ_G0027804)	MGP_CAROLIEiJ_G0027803	Caln1 (MGP_CAROLIEiJ_G0027802)	Tyw1 (MGP_CAROLIEiJ_G0027801)	Sbds (MGP_CAROLIEiJ_G0027800)	Tmem248 (MGP_CAROLIEiJ_G0027799)	Rabgef1 (MGP_CAROLIEiJ_G0027798)	Kctd7 (MGP_CAROLIEiJ_G0027797)	Tpst1 (MGP_CAROLIEiJ_G0027796)	Crcp (MGP_CAROLIEiJ_G0027795)	Asl (MGP_CAROLIEiJ_G0027794)	Gusb (MGP_CAROLIEiJ_G0027793)	Vkorc1l1 (MGP_CAROLIEiJ_G0027792)
Shrew mouse	MODERN SPECIES	15	Zfp11 (MGP_PahariEiJ_G0024362)	Septin14 (MGP_PahariEiJ_G0024363)	MGP_PahariEiJ_G0024364	MGP_PahariEiJ_G0024365	Eln (MGP_PahariEiJ_G0024366) #11	Limk1 (MGP_PahariEiJ_G0024367) #12	Eif4h (MGP_PahariEiJ_G0024368) #13	Lat2 (MGP_PahariEiJ_G0024369) #14	Rfc2 (MGP_PahariEiJ_G0024370) #15	Syna (MGP_PahariEiJ_G0024371)	Clip2 (MGP_PahariEiJ_G0024372) #17	Gtf2ird1 (MGP_PahariEiJ_G0024373) #18	Gtf2i (MGP_PahariEiJ_G0024374) #19	Ncf1 (MGP_PahariEiJ_G0024375) #20	Gtf2ird2 (MGP_PahariEiJ_G0024376) #21	Rcc1l (MGP_PahariEiJ_G0024377) #22	Castor2 (MGP_PahariEiJ_G0024378) #23	MGP_PahariEiJ_G0024379	Galnt17 (MGP_PahariEiJ_G0024380)	Caln1 (MGP_PahariEiJ_G0024381)	MGP_PahariEiJ_G0024382	Tyw1 (MGP_PahariEiJ_G0024383)	Sbds (MGP_PahariEiJ_G0024384)	Tmem248 (MGP_PahariEiJ_G0024385)	Rabgef1 (MGP_PahariEiJ_G0024386)	Kctd7 (MGP_PahariEiJ_G0024387)	Tpst1 (MGP_PahariEiJ_G0024388)	Crcp (MGP_PahariEiJ_G0024389)	Asl (MGP_PahariEiJ_G0024390)	Gusb (MGP_PahariEiJ_G0024391)	Nupr1l (MGP_PahariEiJ_G0024392)
Rat	MODERN SPECIES	3	AABR07072283.2 (ENSRNOG00000059673)	Cldn4 (ENSRNOG00000001476)	Mettl27 (ENSRNOG00000046700) #9	Tmem270 (ENSRNOG00000001474) #10	Eln (ENSRNOG00000001469) #11	Limk1 (ENSRNOG00000001470) #12	Eif4h (ENSRNOG00000001454) #13	Lat2 (ENSRNOG00000021856) #14	Rfc2 (ENSRNOG00000001457) #15	Ervfrd-1 (ENSRNOG00000050672)	Clip2 (ENSRNOG00000021611) #17	Gtf2ird1 (ENSRNOG00000001478) #18	Gtf2i (ENSRNOG00000001479) #19	Ncf1 (ENSRNOG00000001480) #20	Gtf2ird2 (ENSRNOG00000001482) #21	Rcc1l (ENSRNOG00000001483) #22	Castor2 (ENSRNOG00000067286) #23	Auts2 (ENSRNOG00000000885)	Galnt17 (ENSRNOG00000024435)	Caln1 (ENSRNOG00000000886)	Tyw1 (ENSRNOG00000024352)	Sbds (ENSRNOG00000000888)	Tmem248 (ENSRNOG00000000893)	Rabgef1 (ENSRNOG00000000895)	Kctd7 (ENSRNOG00000042384)	Tpst1 (ENSRNOG00000000900)	Vkorc1l1 (ENSRNOG00000000901)	Asl (ENSRNOG00000000903)	ENSRNOG00000070545	Gusb (ENSRNOG00000000913)	Nupr2 (ENSRNOG00000000917)
Cricetidae	ANCESTRAL SPECIES	20	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000163436.n.b	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000165238	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752
Cricetinae	ANCESTRAL SPECIES	27	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000163436.n.b	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000165238	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752
Chinese hamster chok1gshd	MODERN SPECIES	202	Mettl27 (ENSCGRG00001000493) #9	Cldn13 (ENSCGRG00001002544)	Tmem270 (ENSCGRG00001016540) #10	Eln (ENSCGRG00001021282) #11	Limk1 (ENSCGRG00001023083) #12	ENSCGRG00001018549	Eif4h (ENSCGRG00001000916) #13	Lat2 (ENSCGRG00001015344) #14	Rfc2 (ENSCGRG00001005142) #15	Syna (ENSCGRG00001002407)	Clip2 (ENSCGRG00001013708) #17	Gtf2ird1 (ENSCGRG00001010887) #18	Gtf2i (ENSCGRG00001015705) #19	Ncf1 (ENSCGRG00001022040) #20	Gtf2ird2 (ENSCGRG00001017104) #21	Rcc1l (ENSCGRG00001019474) #22	Castor2 (ENSCGRG00001003009) #23	ENSCGRG00001011419	ENSCGRG00001023728	Auts2 (ENSCGRG00001011239)	Galnt17 (ENSCGRG00001021747)	ENSCGRG00001004140	Caln1 (ENSCGRG00001016069)	Tyw1 (ENSCGRG00001003679)	ENSCGRG00001000088	Sbds (ENSCGRG00001019886)	ENSCGRG00001016679
Golden Hamster	MODERN SPECIES	715	Stx1a (ENSMAUG00000022263) #7	Abhd11 (ENSMAUG00000019879) #8	Cldn3 (ENSMAUG00000008536)	Cldn4 (ENSMAUG00000008376)	ENSMAUG00000011735	Cldn13 (ENSMAUG00000010332)	Tmem270 (ENSMAUG00000013942) #10	Eln (ENSMAUG00000017767) #11	Limk1 (ENSMAUG00000013822) #12	Eif4h (ENSMAUG00000000548) #13	Clip2 (ENSMAUG00000019532) #17	ENSMAUG00000008502 #18	ENSMAUG00000004428 #19	ENSMAUG00000013915	Gtf2ird2 (ENSMAUG00000000584) #21	Rcc1l (ENSMAUG00000014220) #22	Castor2 (ENSMAUG00000008802) #23	ENSMAUG00000008331	ENSMAUG00000020804	ENSMAUG00000009035	Galnt17 (ENSMAUG00000012645)	Caln1 (ENSMAUG00000008778)	Tyw1 (ENSMAUG00000002959)	ENSMAUG00000004862	Tmem248 (ENSMAUG00000017171)	Rabgef1 (ENSMAUG00000002772)	Kctd7 (ENSMAUG00000021092)	Asl (ENSMAUG00000007361)	Gusb (ENSMAUG00000010286)	Vkorc1l1 (ENSMAUG00000008820)	Nupr1l (ENSMAUG00000017941)
Cricetidae_B	ANCESTRAL SPECIES	19	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000163436.n.b	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000165238	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752
Prairie vole	MODERN SPECIES	7	ENSMOCG00000021964 #8	Cldn3 (ENSMOCG00000007854)	Cldn4 (ENSMOCG00000007383)	Mettl27 (ENSMOCG00000008990) #9	Tmem270 (ENSMOCG00000016586) #10	Eln (ENSMOCG00000018526) #11	Limk1 (ENSMOCG00000016343) #12	Eif4h (ENSMOCG00000003802) #13	Lat2 (ENSMOCG00000018944) #14	Rfc2 (ENSMOCG00000015610) #15	Clip2 (ENSMOCG00000007890) #17	Gtf2ird1 (ENSMOCG00000011895) #18	Gtf2i (ENSMOCG00000018886) #19	Ncf1 (ENSMOCG00000019150) #20	Gtf2ird2 (ENSMOCG00000022673) #21	Rcc1l (ENSMOCG00000018137) #22	Castor2 (ENSMOCG00000004588) #23	ENSMOCG00000007804	ENSMOCG00000019932	Auts2 (ENSMOCG00000019671)	Galnt17 (ENSMOCG00000014795)	Caln1 (ENSMOCG00000004315)	Tyw1 (ENSMOCG00000017720)	Sbds (ENSMOCG00000011739)	Tmem248 (ENSMOCG00000015391)	Rabgef1 (ENSMOCG00000002614)	ENSMOCG00000014963	Kctd7 (ENSMOCG00000016101)	Wasf3 (ENSMOCG00000013090)	ENSMOCG00000014918	ENSMOCG00000021837
Northern American deer mouse	MODERN SPECIES	15	ENSPEMG00000000427	Tmem270 (ENSPEMG00000001860) #10	Eln (ENSPEMG00000017632) #11	Limk1 (ENSPEMG00000006190) #12	ENSPEMG00000027970	Eif4h (ENSPEMG00000018422) #13	Lat2 (ENSPEMG00000004565) #14	Rfc2 (ENSPEMG00000008890) #15	Syna (ENSPEMG00000009804)	Clip2 (ENSPEMG00000014611) #17	Gtf2ird1 (ENSPEMG00000013955) #18	Gtf2i (ENSPEMG00000011537) #19	Ncf1 (ENSPEMG00000001024) #20	Gtf2ird2 (ENSPEMG00000030871) #21	ENSPEMG00000026235	Rcc1l (ENSPEMG00000015254) #22	Castor2 (ENSPEMG00000011647) #23	ENSPEMG00000018664	ENSPEMG00000013875	ENSPEMG00000009254	Auts2 (ENSPEMG00000010617)	Galnt17 (ENSPEMG00000012502)	Caln1 (ENSPEMG00000018124)	Tyw1 (ENSPEMG00000008274)	Sbds (ENSPEMG00000008728)	Tmem248 (ENSPEMG00000011876)	Rabgef1 (ENSPEMG00000013007)	Kctd7 (ENSPEMG00000028225)	Tpst1 (ENSPEMG00000016787)	Crcp (ENSPEMG00000010829)	Asl (ENSPEMG00000015817)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1571							Limk1 (ENSNGAG00000003903) #12	Eif4h (ENSNGAG00000000522) #13	Lat2 (ENSNGAG00000017864) #14	Rfc2 (ENSNGAG00000016896) #15	Clip2 (ENSNGAG00000010958) #17	Gtf2ird1 (ENSNGAG00000000358) #18	Gtf2i (ENSNGAG00000000686) #19	Ncf1 (ENSNGAG00000011010) #20	Gtf2ird2 (ENSNGAG00000005701) #21	Rcc1l (ENSNGAG00000017890) #22	Castor2 (ENSNGAG00000010606) #23	ENSNGAG00000010834	Auts2 (ENSNGAG00000018040)	Galnt17 (ENSNGAG00000000567)
Lesser Egyptian jerboa	MODERN SPECIES	93												Gtf2ird1 (ENSJJAG00000009277) #18	Gtf2i (ENSJJAG00000014682) #19	Ncf1 (ENSJJAG00000012381) #20	Gtf2ird2 (ENSJJAG00000014741) #21	Rcc1l (ENSJJAG00000017565) #22	Castor2 (ENSJJAG00000018514) #23	ENSJJAG00000014059	ENSJJAG00000020265	ENSJJAG00000021836	Auts2 (ENSJJAG00000022533)	Galnt17 (ENSJJAG00000007799)	Caln1 (ENSJJAG00000017260)	ENSJJAG00000017826	Tyw1 (ENSJJAG00000022959)	ENSJJAG00000000361	ENSJJAG00000003934	Tmem248 (ENSJJAG00000009701)	Rabgef1 (ENSJJAG00000012673)	Kctd7 (ENSJJAG00000014065)	Tpst1 (ENSJJAG00000014389)
Rodentia_A	ANCESTRAL SPECIES	10	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000165238	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752
Sciuridae	ANCESTRAL SPECIES	9	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Marmotini	ANCESTRAL SPECIES	3	ENSGT01030000234627.a.a.c #7	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000167689	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Alpin marmot	MODERN SPECIES	28	BUD23 (ENSMMMG00000009092)	STX1A (ENSMMMG00000009072) #7	ABHD11 (ENSMMMG00000009063) #8	CLDN3 (ENSMMMG00000009059)	CLDN4 (ENSMMMG00000009056)	METTL27 (ENSMMMG00000008950) #9	TMEM270 (ENSMMMG00000008933) #10	LIMK1 (ENSMMMG00000008892) #12	EIF4H (ENSMMMG00000008869) #13	RFC2 (ENSMMMG00000008843) #15	CLIP2 (ENSMMMG00000008784) #17	GTF2IRD1 (ENSMMMG00000008400) #18	GTF2I (ENSMMMG00000005614) #19	NCF1 (ENSMMMG00000005562) #20	ENSMMMG00000005542 #21	RCC1L (ENSMMMG00000005521) #22	CASTOR2 (ENSMMMG00000005489) #23	ENSMMMG00000005481	AUTS2 (ENSMMMG00000005450)	GALNT17 (ENSMMMG00000005419)	CALN1 (ENSMMMG00000005387)	ENSMMMG00000005327	SBDS (ENSMMMG00000005316)	TMEM248 (ENSMMMG00000005293)	RABGEF1 (ENSMMMG00000005256)	KCTD7 (ENSMMMG00000005245)	ENSMMMG00000005238	ENSMMMG00000005237	CRCP (ENSMMMG00000005210)	ASL (ENSMMMG00000005192)	GUSB (ENSMMMG00000004376)
Marmotini_b	ANCESTRAL SPECIES	1	ENSGT01030000234627.a.a.c #7	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00530000064242.b
Squirrel	MODERN SPECIES	143	ABHD11 (ENSSTOG00000007711) #8	CLDN3 (ENSSTOG00000025193)	CLDN4 (ENSSTOG00000020536)	METTL27 (ENSSTOG00000021502) #9	TMEM270 (ENSSTOG00000014579) #10	LIMK1 (ENSSTOG00000012798) #12	EIF4H (ENSSTOG00000020777) #13	ENSSTOG00000034812 #14	RFC2 (ENSSTOG00000026992) #15	CLIP2 (ENSSTOG00000020754) #17	GTF2IRD1 (ENSSTOG00000014343) #18	ENSSTOG00000033789	GTF2I (ENSSTOG00000009641) #19	NCF1 (ENSSTOG00000006420) #20	ENSSTOG00000032504 #21	RCC1L (ENSSTOG00000014118) #22	CASTOR2 (ENSSTOG00000020649) #23	ENSSTOG00000031454	GALNT17 (ENSSTOG00000009496)	CALN1 (ENSSTOG00000013753)	ENSSTOG00000004067	ENSSTOG00000022203	TMEM248 (ENSSTOG00000029043)	RABGEF1 (ENSSTOG00000003192)	TPST1 (ENSSTOG00000028499)	CRCP (ENSSTOG00000008885)	ASL (ENSSTOG00000020066)	GUSB (ENSSTOG00000008865)	VKORC1L1 (ENSSTOG00000008857)	NUPR2 (ENSSTOG00000000064)	CHCHD2 (ENSSTOG00000010512)
Arctic ground squirrel	MODERN SPECIES	176	ABHD11 (ENSUPAG00010000333) #8	CLDN3 (ENSUPAG00010000350)	CLDN4 (ENSUPAG00010000359)	METTL27 (ENSUPAG00010000370) #9	TMEM270 (ENSUPAG00010000473) #10	LIMK1 (ENSUPAG00010000563) #12	EIF4H (ENSUPAG00010000621) #13	ENSUPAG00010000676 #14	RFC2 (ENSUPAG00010000692) #15	CLIP2 (ENSUPAG00010000723) #17	GTF2IRD1 (ENSUPAG00010000788) #18	ENSUPAG00010001832	GTF2I (ENSUPAG00010001864) #19	NCF1 (ENSUPAG00010004896) #20	ENSUPAG00010004921 #21	RCC1L (ENSUPAG00010004931) #22	CASTOR2 (ENSUPAG00010004951) #23
Eurasian red squirrel	MODERN SPECIES	9	ABHD11 (ENSSVLG00005022951) #8	CLDN3 (ENSSVLG00005023122)	CLDN4 (ENSSVLG00005023138)	METTL27 (ENSSVLG00005023181) #9	TMEM270 (ENSSVLG00005023251) #10	ELN (ENSSVLG00005023350) #11	LIMK1 (ENSSVLG00005023428) #12	EIF4H (ENSSVLG00005023644) #13	ENSSVLG00005023686 #14	RFC2 (ENSSVLG00005023739) #15	CLIP2 (ENSSVLG00005023830) #17	GTF2IRD1 (ENSSVLG00005023920) #18	GTF2I (ENSSVLG00005024130) #19	NCF1 (ENSSVLG00005024194) #20	ENSSVLG00005024253 #21	RCC1L (ENSSVLG00005024314) #22	CASTOR2 (ENSSVLG00005024427) #23	ENSSVLG00005024452	ENSSVLG00005024475	AUTS2 (ENSSVLG00005024586)	GALNT17 (ENSSVLG00005024896)	CALN1 (ENSSVLG00005024933)	ENSSVLG00005025043	SBDS (ENSSVLG00005025138)	TMEM248 (ENSSVLG00005025151)	ENSSVLG00005025168	KCTD7 (ENSSVLG00005025205)	TPST1 (ENSSVLG00005025234)	CRCP (ENSSVLG00005025255)	ASL (ENSSVLG00005010242)	GUSB (ENSSVLG00005010427)
Hystricomorpha	ANCESTRAL SPECIES	17	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.c #23	ENSGT00940000165238	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189.g.a	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044.e.b
Naked mole-rat female	MODERN SPECIES		STX1A (ENSHGLG00000010000) #7	ABHD11 (ENSHGLG00000043301) #8	CLDN3 (ENSHGLG00000044396)	CLDN4 (ENSHGLG00000046697)	ENSHGLG00000049431	LIMK1 (ENSHGLG00000018556) #12	ENSHGLG00000037032	ENSHGLG00000040818 #14	RFC2 (ENSHGLG00000012236) #15	ENSHGLG00000037210 #17	GTF2IRD1 (ENSHGLG00000017547) #18	ENSHGLG00000045511	GTF2I (ENSHGLG00000006657) #19	ENSHGLG00000050966 #21	ENSHGLG00000036828 #21	ENSHGLG00000016041 #22	ENSHGLG00000012588 #23	ENSHGLG00000049448	ENSHGLG00000041566	ENSHGLG00000007764	ENSHGLG00000045084	ENSHGLG00000048626	ENSHGLG00000019442	ENSHGLG00000049055	ENSHGLG00000014061	ENSHGLG00000012093	SBDS (ENSHGLG00000009671)	TMEM248 (ENSHGLG00000015603)	RABGEF1 (ENSHGLG00000013753)	KCTD7 (ENSHGLG00000042509)	TPST1 (ENSHGLG00000015982)
Hystricomorpha_a	ANCESTRAL SPECIES	16	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.c #23	ENSGT00940000165238	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189.g.a	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044.f
Guinea pig	MODERN SPECIES	219												GTF2IRD1 (ENSCPOG00000004421) #18	GTF2I (ENSCPOG00000004071) #19	NCF1 (ENSCPOG00000000189) #20	ENSCPOG00000022638 #21	RCC1L (ENSCPOG00000000496) #22	CASTOR2 (ENSCPOG00000032971) #23
Hystricomorpha_b	ANCESTRAL SPECIES	38	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.c #23	ENSGT00940000165238	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189.g.a	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044.f
Degu	MODERN SPECIES	76	STX1A (ENSODEG00000015835) #7	CLDN3 (ENSODEG00000020387)	CLDN4 (ENSODEG00000020405)	METTL27 (ENSODEG00000015241) #9	ENSODEG00000015892 #10	ELN (ENSODEG00000016045) #11	LIMK1 (ENSODEG00000015076) #12	ENSODEG00000015854 #13	ENSODEG00000016042 #14	ENSODEG00000015354 #15	CLIP2 (ENSODEG00000015462) #17	GTF2IRD1 (ENSODEG00000015635) #18	GTF2I (ENSODEG00000015405) #19	NCF1 (ENSODEG00000015696) #20	ENSODEG00000014736 #21	RCC1L (ENSODEG00000014434) #22	CASTOR2 (ENSODEG00000014375) #23	ENSODEG00000015156	ENSODEG00000020386	ENSODEG00000014573	ENSODEG00000020215	ENSODEG00000020176	ENSODEG00000014150	ENSODEG00000014737	AUTS2 (ENSODEG00000016622)	ENSODEG00000020191	GALNT17 (ENSODEG00000016292)	CALN1 (ENSODEG00000015050)	ENSODEG00000014729	ENSODEG00000015687	ENSODEG00000016093
Long-tailed chinchilla	MODERN SPECIES	163	STX1A (ENSCLAG00000005586) #7	ABHD11 (ENSCLAG00000007679) #8	CLDN3 (ENSCLAG00000017844)	CLDN4 (ENSCLAG00000017992)	METTL27 (ENSCLAG00000005194) #9	ENSCLAG00000012225 #10	LIMK1 (ENSCLAG00000009497) #12	EIF4H (ENSCLAG00000012003) #13	ENSCLAG00000008208 #14	RFC2 (ENSCLAG00000009716) #15	CLIP2 (ENSCLAG00000005174) #17	GTF2IRD1 (ENSCLAG00000007139) #18	GTF2I (ENSCLAG00000004967) #19	NCF1 (ENSCLAG00000012338) #20	ENSCLAG00000009126 #21	RCC1L (ENSCLAG00000006691) #22	CASTOR2 (ENSCLAG00000006146) #23	ENSCLAG00000017618	ENSCLAG00000007862	ENSCLAG00000008234	GALNT17 (ENSCLAG00000006308)	CALN1 (ENSCLAG00000017310)	ENSCLAG00000006321	ENSCLAG00000005721	TMEM248 (ENSCLAG00000005032)	RABGEF1 (ENSCLAG00000004534)	KCTD7 (ENSCLAG00000007230)	TPST1 (ENSCLAG00000006101)	CRCP (ENSCLAG00000007249)	ASL (ENSCLAG00000005690)	GUSB (ENSCLAG00000006162)
Lagomorpha	ANCESTRAL SPECIES	89	ENSGT00390000015880 #8	ENSGT00940000154762.a.b	ENSGT00940000162095	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23
Pika	MODERN SPECIES	3932																ENSOPRG00000011316 #22	ENSOPRG00000011297 #23
Rabbit	MODERN SPECIES	498	STX1A (ENSOCUG00000017306) #7	ABHD11 (ENSOCUG00000011326) #8	CLDN4 (ENSOCUG00000010358)	ENSOCUG00000030473	METTL27 (ENSOCUG00000039017) #9	ENSOCUG00000005132 #10	LIMK1 (ENSOCUG00000025224) #12	ENSOCUG00000031506 #11	EIF4H (ENSOCUG00000017685) #13	RFC2 (ENSOCUG00000022152) #15	CLIP2 (ENSOCUG00000017663) #17	GTF2IRD1 (ENSOCUG00000026916) #18	GTF2I (ENSOCUG00000002063) #19	ENSOCUG00000021213 #20	ENSOCUG00000022131 #21	RCC1L (ENSOCUG00000001170) #22	CASTOR2 (ENSOCUG00000011366) #23
Laurasiatheria	ANCESTRAL SPECIES	10	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157317 #22
Hedgehog	MODERN SPECIES	6943																ENSEEUG00000012456 #22
Laurasiatheria_a	ANCESTRAL SPECIES	12	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Artiodactyla	ANCESTRAL SPECIES	10	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Suina	ANCESTRAL SPECIES	31	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT01010000222946	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Pig	MODERN SPECIES	11	STX1A (ENSSSCG00000007772) #7	ABHD11 (ENSSSCG00000007715) #8	CLDN4 (ENSSSCG00000007718)	METTL27 (ENSSSCG00000007717) #9	TMEM270 (ENSSSCG00000007716) #10	ELN (ENSSSCG00000025858) #11	LIMK1 (ENSSSCG00000030378) #12	EIF4H (ENSSSCG00000025966) #13	LAT2 (ENSSSCG00000027487) #14	RFC2 (ENSSSCG00000028504) #15	ENSSSCG00000007719 #17	GTF2IRD1 (ENSSSCG00000007720) #18	GTF2I (ENSSSCG00000007721) #19	NCF1 (ENSSSCG00000007722) #20	ENSSSCG00000028635 #21	RCC1L (ENSSSCG00000007723) #22	CASTOR2 (ENSSSCG00000024045) #23	AUTS2 (ENSSSCG00000007727)	ENSSSCG00000045291	GALNT17 (ENSSSCG00000026457)	ENSSSCG00000007733	ENSSSCG00000037045	SBDS (ENSSSCG00000007732)	TMEM248 (ENSSSCG00000007736)	RABGEF1 (ENSSSCG00000007735)	ENSSSCG00000049181	KCTD7 (ENSSSCG00000040985)	TPST1 (ENSSSCG00000007737)	CRCP (ENSSSCG00000032119)	ASL (ENSSSCG00000007738)	GUSB (ENSSSCG00000007739)
Chacoan peccary	MODERN SPECIES	839									PDGFA (ENSCWAG00000008650)	FOXL3 (ENSCWAG00000008568)	FAM20C (ENSCWAG00000008467)	GTF2IRD1 (ENSCWAG00000008315) #18	GTF2I (ENSCWAG00000007965) #19	NCF1 (ENSCWAG00000007818) #20	ENSCWAG00000007762 #21	RCC1L (ENSCWAG00000007679) #22	CASTOR2 (ENSCWAG00000007652) #23	AUTS2 (ENSCWAG00000007033)	GALNT17 (ENSCWAG00000006869)	ENSCWAG00000006819	CALN1 (ENSCWAG00000006757)	ENSCWAG00000006713	SBDS (ENSCWAG00000006686)	TMEM248 (ENSCWAG00000006669)	RABGEF1 (ENSCWAG00000006643)	KCTD7 (ENSCWAG00000006600)	TPST1 (ENSCWAG00000006559)	CRCP (ENSCWAG00000006447)	ASL (ENSCWAG00000006376)	GUSB (ENSCWAG00000006334)	VKORC1L1 (ENSCWAG00000006299)
Artiodactyla_a	ANCESTRAL SPECIES	10	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Camelidae	ANCESTRAL SPECIES	24	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00440000038159	ENSGT00530000064242.b	ENSGT00940000158139
Alpaca	MODERN SPECIES	2085																RCC1L (ENSVPAG00000006022) #22
Arabian camel	MODERN SPECIES	9	ABHD11 (ENSCDRG00005003546) #8	CLDN3 (ENSCDRG00005003517)	CLDN4 (ENSCDRG00005003463)	METTL27 (ENSCDRG00005003436) #9	TMEM270 (ENSCDRG00005003394) #10	ELN (ENSCDRG00005019059) #11	LIMK1 (ENSCDRG00005018812) #12	EIF4H (ENSCDRG00005018723) #13	ENSCDRG00005018662 #14	RFC2 (ENSCDRG00005018440) #15	CLIP2 (ENSCDRG00005018270) #17	GTF2IRD1 (ENSCDRG00005018072) #18	GTF2I (ENSCDRG00005017614) #19	NCF1 (ENSCDRG00005017503) #20	ENSCDRG00005017453 #21	RCC1L (ENSCDRG00005017366) #22	CASTOR2 (ENSCDRG00005017331) #23	ENSCDRG00005017224	GALNT17 (ENSCDRG00005017193)	ENSCDRG00005017160	CALN1 (ENSCDRG00005017072)	ENSCDRG00005016950	ENSCDRG00005016890	RABGEF1 (ENSCDRG00005016721)	TPST1 (ENSCDRG00005016669)	CRCP (ENSCDRG00005016529)	ASL (ENSCDRG00005016336)	GUSB (ENSCDRG00005016202)	VKORC1L1 (ENSCDRG00005016176)	NUPR2 (ENSCDRG00005016159)	CHCHD2 (ENSCDRG00005016122)
Artiodactyla_b	ANCESTRAL SPECIES	9	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Cetacea	ANCESTRAL SPECIES	3	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Blue whale	MODERN SPECIES	6	ABHD11 (ENSBMSG00010019563) #8	CLDN3 (ENSBMSG00010019496)	CLDN4 (ENSBMSG00010019478)	METTL27 (ENSBMSG00010019449) #9	TMEM270 (ENSBMSG00010019421) #10	LIMK1 (ENSBMSG00010019129) #12	EIF4H (ENSBMSG00010019053) #13	LAT2 (ENSBMSG00010018993) #14	RFC2 (ENSBMSG00010018885) #15	CLIP2 (ENSBMSG00010018684) #17	GTF2IRD1 (ENSBMSG00010018595) #18	ENSBMSG00010018576	GTF2I (ENSBMSG00010018520) #19	NCF1 (ENSBMSG00010018435) #20	ENSBMSG00010018384 #21	RCC1L (ENSBMSG00010018284) #22	CASTOR2 (ENSBMSG00010018221) #23	ENSBMSG00010018202	AUTS2 (ENSBMSG00010017859)	GALNT17 (ENSBMSG00010017656)	CALN1 (ENSBMSG00010017578)	ENSBMSG00010017522	SBDS (ENSBMSG00010017491)	TMEM248 (ENSBMSG00010017447)	RABGEF1 (ENSBMSG00010017334)	TPST1 (ENSBMSG00010017248)	ENSBMSG00010017222	CRCP (ENSBMSG00010017071)	ASL (ENSBMSG00010016759)	GUSB (ENSBMSG00010016632)	VKORC1L1 (ENSBMSG00010016592)
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Sperm whale	MODERN SPECIES	5	HIP1 (ENSPCTG00005007583)	FZD9 (ENSPCTG00005007425)	BAZ1B (ENSPCTG00005007357)	BCL7B (ENSPCTG00005007319)	TBL2 (ENSPCTG00005007307)	ABHD11 (ENSPCTG00005007223) #8	CLDN4 (ENSPCTG00005007204)	METTL27 (ENSPCTG00005007180) #9	TMEM270 (ENSPCTG00005007149) #10	ENSPCTG00005007096 #11	EIF4H (ENSPCTG00005007045) #13	RFC2 (ENSPCTG00005007020) #15	GTF2I (ENSPCTG00005006923) #19	NCF1 (ENSPCTG00005006828) #20	ENSPCTG00005006785 #21	RCC1L (ENSPCTG00005006711) #22	CASTOR2 (ENSPCTG00005006642) #23	ENSPCTG00005006611	AUTS2 (ENSPCTG00005006408)	GALNT17 (ENSPCTG00005006297)	CALN1 (ENSPCTG00005006247)	ENSPCTG00005006047	SBDS (ENSPCTG00005005988)	ENSPCTG00005005963	TMEM248 (ENSPCTG00005005764)	TPST1 (ENSPCTG00005005656)	CRCP (ENSPCTG00005005598)	GUSB (ENSPCTG00005005573)	VKORC1L1 (ENSPCTG00005005543)	NUPR2 (ENSPCTG00005005516)	CHCHD2 (ENSPCTG00005005497)
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Dolphin	MODERN SPECIES	4647																RCC1L (ENSTTRG00000000923) #22	CASTOR2 (ENSTTRG00000000921) #23
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000165227	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00950000183030.m.b.b	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752
Vaquita	MODERN SPECIES	6	ABHD11 (ENSPSNG00000020400) #8	CLDN3 (ENSPSNG00000020379)	CLDN4 (ENSPSNG00000020369)	ENSPSNG00000020349 #9	TMEM270 (ENSPSNG00000020320) #10	ELN (ENSPSNG00000020195) #11	LIMK1 (ENSPSNG00000019936) #12	EIF4H (ENSPSNG00000019872) #13	RFC2 (ENSPSNG00000019692) #15	CLIP2 (ENSPSNG00000019590) #17	GTF2IRD1 (ENSPSNG00000019280) #18	ENSPSNG00000019191	GTF2I (ENSPSNG00000019075) #19	NCF1 (ENSPSNG00000019008) #20	ENSPSNG00000018942 #21	RCC1L (ENSPSNG00000018853) #22	CASTOR2 (ENSPSNG00000018797) #23	ENSPSNG00000018777	ENSPSNG00000018766	ENSPSNG00000018750	ENSPSNG00000018713	AUTS2 (ENSPSNG00000017927)	GALNT17 (ENSPSNG00000017697)	CALN1 (ENSPSNG00000017600)	ENSPSNG00000017350	SBDS (ENSPSNG00000017294)	ENSPSNG00000017211	TMEM248 (ENSPSNG00000017186)	RABGEF1 (ENSPSNG00000017123)	ENSPSNG00000017096	KCTD7 (ENSPSNG00000017004)
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000165227	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00950000183030.m.b.b	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752
Beluga whale	MODERN SPECIES	48	STX1A (ENSDLEG00000007132) #7	ABHD11 (ENSDLEG00000007118) #8	CLDN3 (ENSDLEG00000007112)	CLDN4 (ENSDLEG00000007107)	METTL27 (ENSDLEG00000007099) #9	ENSDLEG00000007082 #10	LIMK1 (ENSDLEG00000006945) #12	EIF4H (ENSDLEG00000006919) #13	ENSDLEG00000006913 #14	RFC2 (ENSDLEG00000006907) #15	CLIP2 (ENSDLEG00000019631) #17	ENSDLEG00000019619	GTF2I (ENSDLEG00000019413) #19	NCF1 (ENSDLEG00000019272) #20	ENSDLEG00000019257 #21	RCC1L (ENSDLEG00000019237) #22	CASTOR2 (ENSDLEG00000019222) #23	AUTS2 (ENSDLEG00000018961)	GALNT17 (ENSDLEG00000018932)	CALN1 (ENSDLEG00000018928)	ENSDLEG00000018904	SBDS (ENSDLEG00000018897)	ENSDLEG00000018890	ENSDLEG00000018883	TMEM248 (ENSDLEG00000018849)	TPST1 (ENSDLEG00000018842)	ASL (ENSDLEG00000018834)	CRCP (ENSDLEG00000018827)	GUSB (ENSDLEG00000018820)	VKORC1L1 (ENSDLEG00000018816)	NUPR2 (ENSDLEG00000018811)
Narwhal	MODERN SPECIES	299	ABHD11 (ENSMMNG00015006866) #8	CLDN3 (ENSMMNG00015006833)	CLDN4 (ENSMMNG00015006822)	METTL27 (ENSMMNG00015006800) #9	TMEM270 (ENSMMNG00015006777) #10	ELN (ENSMMNG00015006644) #11	LIMK1 (ENSMMNG00015006567) #12	EIF4H (ENSMMNG00015006534) #13	RFC2 (ENSMMNG00015006460) #15	CLIP2 (ENSMMNG00015006394) #17	GTF2IRD1 (ENSMMNG00015006251) #18	ENSMMNG00015006197	GTF2I (ENSMMNG00015005965) #19	NCF1 (ENSMMNG00015005833) #20	ENSMMNG00015005795 #21	RCC1L (ENSMMNG00015005769) #22	CASTOR2 (ENSMMNG00015005735) #23	ENSMMNG00015005712	AUTS2 (ENSMMNG00015005460)	GALNT17 (ENSMMNG00015005367)	CALN1 (ENSMMNG00015005340)	ENSMMNG00015005309	SBDS (ENSMMNG00015005284)	ENSMMNG00015005273	TMEM248 (ENSMMNG00015005259)	RABGEF1 (ENSMMNG00015005238)	ENSMMNG00015005221	KCTD7 (ENSMMNG00015005208)	TPST1 (ENSMMNG00015009312)	ASL (ENSMMNG00015009264)	CRCP (ENSMMNG00015009231)
Pecora	ANCESTRAL SPECIES	10	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.e #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00530000064242.b
Yarkand deer	MODERN SPECIES	1	CLDN4 (ENSCHYG00000005394)	METTL27 (ENSCHYG00000005351) #9	TMEM270 (ENSCHYG00000005302) #10	ELN (ENSCHYG00000005035) #11	LIMK1 (ENSCHYG00000004898) #12	EIF4H (ENSCHYG00000004867) #13	LAT2 (ENSCHYG00000004841) #14	RFC2 (ENSCHYG00000004804) #15	CLIP2 (ENSCHYG00000004721) #17	GTF2IRD1 (ENSCHYG00000004594) #18	ENSCHYG00000004569	GTF2I (ENSCHYG00000004389) #19	NCF1 (ENSCHYG00000004276) #20	ENSCHYG00000004264 #21	ENSCHYG00000004252 #21	RCC1L (ENSCHYG00000004214) #22	CASTOR2 (ENSCHYG00000004195) #23	ENSCHYG00000004166	ENSCHYG00000004161	AUTS2 (ENSCHYG00000004029)	GALNT17 (ENSCHYG00000003960)	CALN1 (ENSCHYG00000003944)	ENSCHYG00000003900	SBDS (ENSCHYG00000003826)	TMEM248 (ENSCHYG00000003810)	RABGEF1 (ENSCHYG00000003684)	TPST1 (ENSCHYG00000003642)	ENSCHYG00000003632	ENSCHYG00000003550	ASL (ENSCHYG00000003406)	GUSB (ENSCHYG00000003291)
Percora_a	ANCESTRAL SPECIES	9	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.e #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00530000064242.b
Bovidae	ANCESTRAL SPECIES	11	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00940000154268.e.a	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.e #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752.v	ENSGT00390000001752.u	ENSGT00940000157044
Bovinae	ANCESTRAL SPECIES	7	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00940000154268.e.a	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.e #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752.v	ENSGT00390000001752.u	ENSGT00940000157044
Bos	ANCESTRAL SPECIES	9	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00940000154268.e.a	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.e #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189.t	ENSGT00950000183122.B	ENSGT00390000001752.v	ENSGT00390000001752.u	ENSGT00940000157044
Bos_b	ANCESTRAL SPECIES	6	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00940000154268.e.a	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.e #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189.t	ENSGT00950000183122.B	ENSGT00390000001752.v	ENSGT01100000264399.a.a	ENSGT00390000001752.u
Hybrid Bos Indicus	MODERN SPECIES	17	CLDN4 (ENSBIXG00005000455)	METTL27 (ENSBIXG00005009281) #9	ENSBIXG00005009270	TMEM270 (ENSBIXG00005009256) #10	ELN (ENSBIXG00005009230) #11	LIMK1 (ENSBIXG00005000407) #12	EIF4H (ENSBIXG00005005364) #13	LAT2 (ENSBIXG00005009055) #14	RFC2 (ENSBIXG00005008986) #15	CLIP2 (ENSBIXG00005000321) #17	GTF2IRD1 (ENSBIXG00005008846) #18	ENSBIXG00005008743	GTF2I (ENSBIXG00005008700) #19	NCF1 (ENSBIXG00005008664) #20	ENSBIXG00005008649 #21	RCC1L (ENSBIXG00005000231) #22	ENSBIXG00005008573 #23	ENSBIXG00005008556	AUTS2 (ENSBIXG00005001950)	ENSBIXG00005002145	GALNT17 (ENSBIXG00005002170)	CALN1 (ENSBIXG00005028913)	ENSBIXG00005002287	SBDS (ENSBIXG00005028791)	TMEM248 (ENSBIXG00005028774)	RABGEF1 (ENSBIXG00005028710)	TPST1 (ENSBIXG00005028601)	CRCP (ENSBIXG00005004923)	ASL (ENSBIXG00005028474)	ENSBIXG00005028380	ENSBIXG00005028260
Cow	MODERN SPECIES	17	CLDN3 (ENSBTAG00000040432)	CLDN4 (ENSBTAG00000026278)	METTL27 (ENSBTAG00000001374) #9	ENSBTAG00000051532	TMEM270 (ENSBTAG00000014810) #10	ELN (ENSBTAG00000019517) #11	LIMK1 (ENSBTAG00000044083) #12	EIF4H (ENSBTAG00000047249) #13	LAT2 (ENSBTAG00000045767) #14	RFC2 (ENSBTAG00000018589) #15	CLIP2 (ENSBTAG00000011875) #17	GTF2IRD1 (ENSBTAG00000006212) #18	GTF2I (ENSBTAG00000009780) #19	NCF1 (ENSBTAG00000003305) #20	GTF2IRD2 (ENSBTAG00000026286) #21	RCC1L (ENSBTAG00000011753) #22	ENSBTAG00000014417 #23	AUTS2 (ENSBTAG00000002083)	GALNT17 (ENSBTAG00000008718)	CALN1 (ENSBTAG00000043969)	TYW1 (ENSBTAG00000008446)	SBDS (ENSBTAG00000004051)	TMEM248 (ENSBTAG00000002935)	RABGEF1 (ENSBTAG00000003842)	KCTD7 (ENSBTAG00000017435)	TPST1 (ENSBTAG00000000390)	CRCP (ENSBTAG00000037489)	ASL (ENSBTAG00000015314)	ENSBTAG00000052611	ENSBTAG00000055247	GUSB (ENSBTAG00000000704)
Bos_a	ANCESTRAL SPECIES	41	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00940000154268.e.a	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.e #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135.o	ENSGT00390000008135.p	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189.s.a	ENSGT00390000014189.t	ENSGT00950000183122.B	ENSGT00390000001752.v
Domestic yak	MODERN SPECIES	18	ENSBGRG00000013047	CLDN4 (ENSBGRG00000013079)	METTL27 (ENSBGRG00000013126) #9	ENSBGRG00000013166	TMEM270 (ENSBGRG00000013209) #10	ELN (ENSBGRG00000013383) #11	LIMK1 (ENSBGRG00000019391) #12	ENSBGRG00000019729 #13	LAT2 (ENSBGRG00000019878) #14	RFC2 (ENSBGRG00000020073) #15	CLIP2 (ENSBGRG00000020435) #17	GTF2IRD1 (ENSBGRG00000020750) #18	GTF2I (ENSBGRG00000021271) #19	NCF1 (ENSBGRG00000021502) #20	ENSBGRG00000021552 #21	RCC1L (ENSBGRG00000021587) #22	CASTOR2 (ENSBGRG00000021809) #23	ENSBGRG00000022117	ENSBGRG00000022128	AUTS2 (ENSBGRG00000022202)	GALNT17 (ENSBGRG00000022266)	CALN1 (ENSBGRG00000022420)	ENSBGRG00000022606	ENSBGRG00000023101	ENSBGRG00000023113	TMEM248 (ENSBGRG00000023157)	RABGEF1 (ENSBGRG00000023227)	TPST1 (ENSBGRG00000023623)	ENSBGRG00000023659	CRCP (ENSBGRG00000023686)	ASL (ENSBGRG00000023875)
Wild yak	MODERN SPECIES	514	CLDN4 (ENSBMUG00000008293)	METTL27 (ENSBMUG00000008303) #9	ENSBMUG00000008318	TMEM270 (ENSBMUG00000008323) #10	ELN (ENSBMUG00000009116) #11	LIMK1 (ENSBMUG00000010736) #12	EIF4H (ENSBMUG00000010773) #13	LAT2 (ENSBMUG00000010806) #14	RFC2 (ENSBMUG00000010871) #15	CLIP2 (ENSBMUG00000010933) #17	ENSBMUG00000010973	GTF2IRD1 (ENSBMUG00000011059) #18	GTF2I (ENSBMUG00000011362) #19	NCF1 (ENSBMUG00000011510) #20	ENSBMUG00000011592 #21	RCC1L (ENSBMUG00000011658) #22	CASTOR2 (ENSBMUG00000011693) #23
American bison	MODERN SPECIES	3254	CLDN3 (ENSBBBG00000002216)	CLDN4 (ENSBBBG00000011897)	METTL27 (ENSBBBG00000011912) #9	ENSBBBG00000011916	TMEM270 (ENSBBBG00000011925) #10	ELN (ENSBBBG00000003006) #11	LIMK1 (ENSBBBG00000014034) #12	EIF4H (ENSBBBG00000003126) #13	LAT2 (ENSBBBG00000014081) #14	RFC2 (ENSBBBG00000007550) #15	CLIP2 (ENSBBBG00000014174) #17	GTF2IRD1 (ENSBBBG00000014254) #18	GTF2I (ENSBBBG00000014455) #19	NCF1 (ENSBBBG00000014482) #20	ENSBBBG00000003371 #21	RCC1L (ENSBBBG00000014512) #22	ENSBBBG00000003394 #23	AUTS2 (ENSBBBG00000014700)	GALNT17 (ENSBBBG00000014771)	ENSBBBG00000014777
Caprinae	ANCESTRAL SPECIES	7	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00940000154268.e.a	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a.e #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752.v	ENSGT00390000001752.u	ENSGT00940000157044
Rambouillet Sheep	MODERN SPECIES	16	CLDN3 (ENSOARG00020021144)	CLDN4 (ENSOARG00020021120)	METTL27 (ENSOARG00020021083) #9	ENSOARG00020021057	TMEM270 (ENSOARG00020021023) #10	ELN (ENSOARG00020020966) #11	LIMK1 (ENSOARG00020020624) #12	EIF4H (ENSOARG00020020498) #13	LAT2 (ENSOARG00020020452) #14	RFC2 (ENSOARG00020020256) #15	CLIP2 (ENSOARG00020020096) #17	GTF2IRD1 (ENSOARG00020018854) #18	GTF2I (ENSOARG00020018473) #19	NCF1 (ENSOARG00020018390) #20	ENSOARG00020018229 #21	RCC1L (ENSOARG00020018061) #22	ENSOARG00020017977 #23	ENSOARG00020017933	ENSOARG00020017893	AUTS2 (ENSOARG00020016942)	GALNT17 (ENSOARG00020016759)	CALN1 (ENSOARG00020016674)	ENSOARG00020016504	SBDS (ENSOARG00020016462)	TMEM248 (ENSOARG00020016403)	RABGEF1 (ENSOARG00020016344)	KCTD7 (ENSOARG00020015853)	TPST1 (ENSOARG00020015801)	CRCP (ENSOARG00020015620)	ASL (ENSOARG00020015387)	ENSOARG00020015290
Goat	MODERN SPECIES	17	CLDN4 (ENSCHIG00000004293)	METTL27 (ENSCHIG00000020950) #9	ENSCHIG00000006172	TMEM270 (ENSCHIG00000018876) #10	ENSCHIG00000018073 #11	LIMK1 (ENSCHIG00000027103) #12	EIF4H (ENSCHIG00000020637) #13	ENSCHIG00000020053 #14	RFC2 (ENSCHIG00000009030) #15	CLIP2 (ENSCHIG00000020974) #17	GTF2IRD1 (ENSCHIG00000020027) #18	GTF2I (ENSCHIG00000008326) #19	NCF1 (ENSCHIG00000022178) #20	ENSCHIG00000011875 #21	ENSCHIG00000006082	RCC1L (ENSCHIG00000019471) #22	ENSCHIG00000019190 #23	ENSCHIG00000026324	ENSCHIG00000016157	AUTS2 (ENSCHIG00000016565)	GALNT17 (ENSCHIG00000025267)	CALN1 (ENSCHIG00000013488)	ENSCHIG00000019510	SBDS (ENSCHIG00000026854)	TMEM248 (ENSCHIG00000022725)	RABGEF1 (ENSCHIG00000018633)	KCTD7 (ENSCHIG00000014029)	ENSCHIG00000023715	TPST1 (ENSCHIG00000020421)	CRCP (ENSCHIG00000015299)	ENSCHIG00000006914
Siberian musk deer	MODERN SPECIES	212	CLDN3 (ENSMMSG00000004306)	CLDN4 (ENSMMSG00000004301)	METTL27 (ENSMMSG00000004293) #9	TMEM270 (ENSMMSG00000004281) #10	ELN (ENSMMSG00000004248) #11	LIMK1 (ENSMMSG00000004196) #12	EIF4H (ENSMMSG00000004173) #13	ENSMMSG00000004160 #14	RFC2 (ENSMMSG00000004115) #15	ENSMMSG00000004091	CLIP2 (ENSMMSG00000004059) #17	GTF2IRD1 (ENSMMSG00000003977) #18	ENSMMSG00000003930 #19	NCF1 (ENSMMSG00000003876) #20	ENSMMSG00000003868 #21	RCC1L (ENSMMSG00000003857) #22	CASTOR2 (ENSMMSG00000003837) #23	AUTS2 (ENSMMSG00000003484)	GALNT17 (ENSMMSG00000003415)	ENSMMSG00000003397	CALN1 (ENSMMSG00000003373)	ENSMMSG00000003317	SBDS (ENSMMSG00000003299)	TMEM248 (ENSMMSG00000003291)	ENSMMSG00000003272	KCTD7 (ENSMMSG00000003247)	ENSMMSG00000003233	TPST1 (ENSMMSG00000003222)	CRCP (ENSMMSG00000003203)	ASL (ENSMMSG00000003136)	GUSB (ENSMMSG00000003080)
Laurasiatheria_b	ANCESTRAL SPECIES	12	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Carnivora	ANCESTRAL SPECIES	12	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00390000012097	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT01050000245292	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B
Felidae	ANCESTRAL SPECIES	19	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266.b #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00390000012097	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT01050000245292	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752
Panthera	ANCESTRAL SPECIES	27	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00390000010491.lb.a	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266.b #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT01050000245292	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Panthera_a	ANCESTRAL SPECIES	27	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00390000010491.lb.a	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266.b #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT01050000245292	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
leopard	MODERN SPECIES	87	ABHD11 (ENSPPRG00000022012) #8	CLDN3 (ENSPPRG00000018103)	CLDN4 (ENSPPRG00000018090)	METTL27 (ENSPPRG00000018842) #9	TMEM270 (ENSPPRG00000017544) #10	ENSPPRG00000015603 #11	LIMK1 (ENSPPRG00000014015) #12	ENSPPRG00000017935	EIF4H (ENSPPRG00000010557) #13	RFC2 (ENSPPRG00000010080) #15	CLIP2 (ENSPPRG00000008420) #17	GTF2IRD1 (ENSPPRG00000002815) #18	GTF2I (ENSPPRG00000023912) #19	NCF1 (ENSPPRG00000017417) #20	ENSPPRG00000015109 #21	RCC1L (ENSPPRG00000013997) #22	CASTOR2 (ENSPPRG00000012000) #23	AUTS2 (ENSPPRG00000011338)	ENSPPRG00000007585	GALNT17 (ENSPPRG00000007517)	CALN1 (ENSPPRG00000006558)	ENSPPRG00000004945	SBDS (ENSPPRG00000002307)	TMEM248 (ENSPPRG00000001641)	RABGEF1 (ENSPPRG00000001117)	ENSPPRG00000016913	KCTD7 (ENSPPRG00000016341)	TPST1 (ENSPPRG00000013305)	CRCP (ENSPPRG00000012841)	ASL (ENSPPRG00000011999)	GUSB (ENSPPRG00000008734)
lion	MODERN SPECIES	16	STX1A (ENSPLOG00000021856) #7	ABHD11 (ENSPLOG00000021764) #8	CLDN3 (ENSPLOG00000021731)	CLDN4 (ENSPLOG00000021723)	METTL27 (ENSPLOG00000021706) #9	TMEM270 (ENSPLOG00000021690) #10	LIMK1 (ENSPLOG00000019957) #12	EIF4H (ENSPLOG00000019830) #13	LAT2 (ENSPLOG00000019796) #14	RFC2 (ENSPLOG00000019704) #15	CLIP2 (ENSPLOG00000019467) #17	GTF2IRD1 (ENSPLOG00000018719) #18	GTF2I (ENSPLOG00000018434) #19	NCF1 (ENSPLOG00000018275) #20	ENSPLOG00000018231 #21	RCC1L (ENSPLOG00000018199) #22	CASTOR2 (ENSPLOG00000018154) #23	AUTS2 (ENSPLOG00000017305)	GALNT17 (ENSPLOG00000017045)	CALN1 (ENSPLOG00000016945)	ENSPLOG00000016581	SBDS (ENSPLOG00000016501)	TMEM248 (ENSPLOG00000016467)	RABGEF1 (ENSPLOG00000016408)	KCTD7 (ENSPLOG00000016310)	TPST1 (ENSPLOG00000016253)	CRCP (ENSPLOG00000016180)	ASL (ENSPLOG00000015644)	GUSB (ENSPLOG00000015513)	VKORC1L1 (ENSPLOG00000015459)	ENSPLOG00000015440
Tiger	MODERN SPECIES	32	BCL7B (ENSPTIG00000006042)	TBL2 (ENSPTIG00000000966)	BUD23 (ENSPTIG00000017459)	STX1A (ENSPTIG00000016462) #7	ABHD11 (ENSPTIG00000015169) #8	METTL27 (ENSPTIG00000014374) #9	LIMK1 (ENSPTIG00000011697) #12	ENSPTIG00000009717	EIF4H (ENSPTIG00000007636) #13	RFC2 (ENSPTIG00000022027) #15	CLIP2 (ENSPTIG00000019794) #17	GTF2IRD1 (ENSPTIG00000012216) #18	GTF2I (ENSPTIG00000008776) #19	NCF1 (ENSPTIG00000007186) #20	ENSPTIG00000006123 #21	RCC1L (ENSPTIG00000020920) #22	CASTOR2 (ENSPTIG00000020335) #23
Cat	MODERN SPECIES	247	ABHD11 (ENSFCAG00000004744) #8	CLDN3 (ENSFCAG00000035405)	CLDN4 (ENSFCAG00000004743)	METTL27 (ENSFCAG00000034574) #9	TMEM270 (ENSFCAG00000026413) #10	ELN (ENSFCAG00000044781) #11	LIMK1 (ENSFCAG00000009702) #12	EIF4H (ENSFCAG00000029386) #13	RFC2 (ENSFCAG00000009705) #15	LAT2 (ENSFCAG00000050288) #14	CLIP2 (ENSFCAG00000006550) #17	GTF2IRD1 (ENSFCAG00000006551) #18	GTF2I (ENSFCAG00000002617) #19	NCF1 (ENSFCAG00000002468) #20	ENSFCAG00000002626 #21	RCC1L (ENSFCAG00000002467) #22	CASTOR2 (ENSFCAG00000041392) #23	AUTS2 (ENSFCAG00000015412)	ENSFCAG00000041280	GALNT17 (ENSFCAG00000015348)	ENSFCAG00000008708	ENSFCAG00000014262	SBDS (ENSFCAG00000022142)	TMEM248 (ENSFCAG00000024076)	RABGEF1 (ENSFCAG00000023401)	KCTD7 (ENSFCAG00000041189)	TPST1 (ENSFCAG00000024042)	CRCP (ENSFCAG00000022099)	ASL (ENSFCAG00000006929)	SUMF2 (ENSFCAG00000002981)	GUSB (ENSFCAG00000006928)
Caniformia	ANCESTRAL SPECIES	8	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00390000012097	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT01050000245292	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B
Caniformia_b	ANCESTRAL SPECIES	7	ENSGT00390000015880 #8	ENSGT00940000162095.x	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00390000012097	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT01050000245292	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B
Ursidae	ANCESTRAL SPECIES	3	ENSGT00390000015880 #8	ENSGT00940000162095.x	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00910000147616	ENSGT00940000154823	ENSGT00390000012097	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT01050000245292	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B.p
Ursus	ANCESTRAL SPECIES	153					ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT01050000245292	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B.p	ENSGT00390000001752	ENSGT00940000157044
American black bear	MODERN SPECIES	183											GTF2IRD1 (ENSUAMG00000008608) #18	GTF2I (ENSUAMG00000008598) #19	NCF1 (ENSUAMG00000008597) #20	ENSUAMG00000008596 #21	ENSUAMG00000008593 #21	RCC1L (ENSUAMG00000008589) #22	CASTOR2 (ENSUAMG00000008586) #23
Polar bear	MODERN SPECIES	213	BUD23 (ENSUMAG00000013691)	STX1A (ENSUMAG00000013717) #7	ABHD11 (ENSUMAG00000013995) #8	METTL27 (ENSUMAG00000013997) #9	CLDN4 (ENSUMAG00000013999)	ENSUMAG00000014004 #11	LIMK1 (ENSUMAG00000014035) #12	EIF4H (ENSUMAG00000014241) #13	ENSUMAG00000014249 #15	ENSUMAG00000014252 #15	ENSUMAG00000014256 #17	GTF2IRD1 (ENSUMAG00000014292) #18	GTF2I (ENSUMAG00000014843) #19	NCF1 (ENSUMAG00000014919) #20	ENSUMAG00000014971 #21	RCC1L (ENSUMAG00000014977) #22	CASTOR2 (ENSUMAG00000014984) #23	AUTS2 (ENSUMAG00000015011)	GALNT17 (ENSUMAG00000015252)	CALN1 (ENSUMAG00000015325)	ENSUMAG00000015343	SBDS (ENSUMAG00000015353)	TMEM248 (ENSUMAG00000015357)	RABGEF1 (ENSUMAG00000015372)	ENSUMAG00000015379	KCTD7 (ENSUMAG00000015391)	TPST1 (ENSUMAG00000015398)	CRCP (ENSUMAG00000015406)	ENSUMAG00000015408	ASL (ENSUMAG00000015419)	GUSB (ENSUMAG00000015437)
Giant Panda	MODERN SPECIES	1	CLDN3 (ENSAMEG00000019096)	CLDN4 (ENSAMEG00000019133)	METTL27 (ENSAMEG00000011344) #9	TMEM270 (ENSAMEG00000015449) #10	ELN (ENSAMEG00000015429) #11	LIMK1 (ENSAMEG00000015431) #12	EIF4H (ENSAMEG00000015416) #13	LAT2 (ENSAMEG00000015412) #14	RFC2 (ENSAMEG00000015384) #15	CLIP2 (ENSAMEG00000015346) #17	GTF2IRD1 (ENSAMEG00000015311) #18	GTF2I (ENSAMEG00000015241) #19	NCF1 (ENSAMEG00000015198) #20	ENSAMEG00000027499 #21	ENSAMEG00000015146 #21	ENSAMEG00000015121 #22	ENSAMEG00000015092 #23	ENSAMEG00000005777	ENSAMEG00000026489	ENSAMEG00000024717	ENSAMEG00000005827	CALN1 (ENSAMEG00000004180)	ENSAMEG00000018158	SBDS (ENSAMEG00000018167)	RABGEF1 (ENSAMEG00000018176)	ENSAMEG00000029088	KCTD7 (ENSAMEG00000028525)	TPST1 (ENSAMEG00000018181)	ENSAMEG00000014898	CRCP (ENSAMEG00000015954)	ENSAMEG00000015956
Mustelinae	ANCESTRAL SPECIES	41	ENSGT00390000015880 #8	ENSGT00940000162095.x	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00530000064242.b
Ferret	MODERN SPECIES	243	CLDN3 (ENSMPUG00000019769)	CLDN4 (ENSMPUG00000019770)	METTL27 (ENSMPUG00000016084) #9	ELN (ENSMPUG00000016085) #11	LIMK1 (ENSMPUG00000016086) #12	EIF4H (ENSMPUG00000016107) #13	ENSMPUG00000016114 #14	RFC2 (ENSMPUG00000016117) #15	ENSMPUG00000016120	CLIP2 (ENSMPUG00000016121) #17	ENSMPUG00000019771	GTF2IRD1 (ENSMPUG00000016153) #18	GTF2I (ENSMPUG00000016156) #19	NCF1 (ENSMPUG00000016161) #20	ENSMPUG00000016180 #21	RCC1L (ENSMPUG00000016182) #22	CASTOR2 (ENSMPUG00000016183) #23	AUTS2 (ENSMPUG00000016184)	GALNT17 (ENSMPUG00000016186)	ENSMPUG00000016188	CALN1 (ENSMPUG00000016189)	ENSMPUG00000016190	ENSMPUG00000016191	SBDS (ENSMPUG00000016192)	TMEM248 (ENSMPUG00000016193)	RABGEF1 (ENSMPUG00000016195)	KCTD7 (ENSMPUG00000016196)	TPST1 (ENSMPUG00000016197)	CRCP (ENSMPUG00000016198)	ENSMPUG00000016199	ASL (ENSMPUG00000016200)
American mink	MODERN SPECIES	102	ABHD11 (ENSNVIG00000004779) #8	CLDN3 (ENSNVIG00000004820)	ENSNVIG00000004827	METTL27 (ENSNVIG00000004833) #9	TMEM270 (ENSNVIG00000004849) #10	ELN (ENSNVIG00000004873) #11	LIMK1 (ENSNVIG00000004934) #12	EIF4H (ENSNVIG00000005144) #13	LAT2 (ENSNVIG00000005171) #14	RFC2 (ENSNVIG00000005324) #15	CLIP2 (ENSNVIG00000005341) #17	GTF2IRD1 (ENSNVIG00000005470) #18	GTF2I (ENSNVIG00000005704) #19	NCF1 (ENSNVIG00000006005) #20	ENSNVIG00000006028 #21	WBS16 (ENSNVIG00000006072) #22	CASTOR2 (ENSNVIG00000006092) #23	AUTS2 (ENSNVIG00000006153)
Canidae	ANCESTRAL SPECIES	3	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00390000010089.e.a	ENSGT00940000160349.d #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00390000012097	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044
Canis_lupus	ANCESTRAL SPECIES	2	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00390000014814.a.b.a.a.b	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00390000010089.e.a	ENSGT00940000160349.d #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000153305.d.cb.a.a	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00390000012097	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00490000043329.a.a.a.ob.b.b
Dingo	MODERN SPECIES	351	TMEM270 (ENSCAFG00020012374) #10	ENSCAFG00020012355	LIMK1 (ENSCAFG00020011440) #12	EIF4H (ENSCAFG00020011392) #13	ENSCAFG00020011389	RFC2 (ENSCAFG00020011381) #15	CLIP2 (ENSCAFG00020011369) #17	GTF2IRD1 (ENSCAFG00020011088) #18	ENSCAFG00020011033	ENSCAFG00020011031	GTF2I (ENSCAFG00020006044) #19	NCF1 (ENSCAFG00020005887) #20	ENSCAFG00020005880 #21	ENSCAFG00020005872 #21	ENSCAFG00020005866	RCC1L (ENSCAFG00020005857) #22	CASTOR2 (ENSCAFG00020005843) #23	ENSCAFG00020005832	AUTS2 (ENSCAFG00020005537)	GALNT17 (ENSCAFG00020005470)	CALN1 (ENSCAFG00020005451)	ENSCAFG00020005367	SBDS (ENSCAFG00020005357)	TMEM248 (ENSCAFG00020005347)	RABGEF1 (ENSCAFG00020005342)	KCTD7 (ENSCAFG00020005338)	TPST1 (ENSCAFG00020005327)	CRCP (ENSCAFG00020005322)	ASL (ENSCAFG00020005294)	ENSCAFG00020005291	ENSCAFG00020005202
Dog	MODERN SPECIES	34	METTL27 (ENSCAFG00845003096) #9	TMEM270 (ENSCAFG00845003064) #10	ELN (ENSCAFG00845003016) #11	ENSCAFG00845002926	LIMK1 (ENSCAFG00845002825) #12	EIF4H (ENSCAFG00845002722) #13	LAT2 (ENSCAFG00845002651) #14	RFC2 (ENSCAFG00845002565) #15	CLIP2 (ENSCAFG00845002441) #17	GTF2IRD1 (ENSCAFG00845002189) #18	ENSCAFG00845002113	GTF2I (ENSCAFG00845002034) #19	NCF1 (ENSCAFG00845001935) #20	ENSCAFG00845001822 #21	ENSCAFG00845001768	ENSCAFG00845001594 #22	ENSCAFG00845001480 #23	ENSCAFG00845001242	ENSCAFG00845001077	GALNT17 (ENSCAFG00845001050)	CALN1 (ENSCAFG00845000984)	ENSCAFG00845000884	ENSCAFG00845000847	TMEM248 (ENSCAFG00845000825)	RABGEF1 (ENSCAFG00845000731)	TPST1 (ENSCAFG00845013673)	CRCP (ENSCAFG00845013625)	ASL (ENSCAFG00845013432)	ENSCAFG00845013354	ENSCAFG00845013344	GUSB (ENSCAFG00845013255)
Red fox	MODERN SPECIES	135												GTF2I (ENSVVUG00000014653) #19	NCF1 (ENSVVUG00000014944) #20	ENSVVUG00000014950 #21	ENSVVUG00000014951 #21	RCC1L (ENSVVUG00000014957) #22	ENSVVUG00000014962 #23	ENSVVUG00000014991	AUTS2 (ENSVVUG00000015017)	GALNT17 (ENSVVUG00000016442)	CALN1 (ENSVVUG00000016447)	ENSVVUG00000016457	SBDS (ENSVVUG00000016478)	TMEM248 (ENSVVUG00000016485)	RABGEF1 (ENSVVUG00000016497)	TPST1 (ENSVVUG00000016513)	CRCP (ENSVVUG00000016521)	ASL (ENSVVUG00000016541)	ENSVVUG00000016569	GUSB (ENSVVUG00000016579)	VKORC1L1 (ENSVVUG00000016584)
Laurasiatheria_c	ANCESTRAL SPECIES	12	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00530000064242.b
Equus	ANCESTRAL SPECIES	22	ENSGT00390000008831.v	ENSGT00390000016193	ENSGT00390000014072.B	ENSGT00640000091486.b	ENSGT00940000159929	ENSGT01050000244824.C	ENSGT00950000183073.a.a.b	ENSGT00940000153104.e.b.b	ENSGT01050000245239.e.a	ENSGT00940000161607	ENSGT00940000161592	ENSGT01100000263517.b.d.m.b.a.a	ENSGT01090000260005.a.a.a.a	ENSGT00940000163330	ENSGT01050000244868.a.a.a.a.a.b.m.b	ENSGT00940000157317 #22	ENSGT01090000260018.B.b.m.a.a.b	ENSGT01090000260018.B.b.m.a.a.a	ENSGT00950000182958.a.b.b.j.g.b	ENSGT00950000182958.a.b.b.j.h.b.b.b	ENSGT01080000259722	ENSGT00950000182958.a.b.b.j.h.a	ENSGT00950000182958.a.b.b.j.g.a	ENSGT00950000182958.a.b.b.j.h.b.a	ENSGT00950000183016.E.b.a.b.b.a.a.b.a.b.a	ENSGT00950000182958.a.b.b.j.h.b.b.a	ENSGT00940000162113	ENSGT00760000119441	ENSGT00940000164024	ENSGT00940000162299	ENSGT00940000162347
Donkey	MODERN SPECIES	5	ENSEASG00005018935	MBLAC1 (ENSEASG00005036677)	CNPY4 (ENSEASG00005018940)	TAF6 (ENSEASG00005018943)	AP4M1 (ENSEASG00005018948)	MCM7 (ENSEASG00005018953)	COPS6 (ENSEASG00005018961)	ZNF3 (ENSEASG00005024752)	ENSEASG00005028758	ENSEASG00005018972	ZKSCAN1 (ENSEASG00005018973)	ENSEASG00005018976	ENSEASG00005018980	ENSEASG00005018981	ENSEASG00005000059	ENSEASG00005013055 #22	ENSEASG00005013075	ENSEASG00005013076	ENSEASG00005013077	ENSEASG00005007568	ENSEASG00005003366	ENSEASG00005006103	ENSEASG00005010418	ENSEASG00005005944	ENSEASG00005035281	ENSEASG00005029400	ZSCAN25 (ENSEASG00005033268)	ZNF655 (ENSEASG00005007744)	FAM200A (ENSEASG00005031341)	ZKSCAN5 (ENSEASG00005007748)	ENSEASG00005007749
Horse	MODERN SPECIES	4	AP4M1 (ENSECAG00000016103)	MCM7 (ENSECAG00000015149)	COPS6 (ENSECAG00000008997)	ZNF3 (ENSECAG00000024649)	ENSECAG00000034869	ENSECAG00000029765	ENSECAG00000030390	ZSCAN21 (ENSECAG00000054193)	ZKSCAN1 (ENSECAG00000030386)	AZGP1 (ENSECAG00000014927)	GJC3 (ENSECAG00000006102)	TRIM4 (ENSECAG00000014342)	ENSECAG00000051063	ENSECAG00000053562	ENSECAG00000008816	RCC1L (ENSECAG00000021984) #22	OR2AE1C (ENSECAG00000029942)	OR2AE1B (ENSECAG00000029774)	ENSECAG00000056556	ENSECAG00000053567	ENSECAG00000055355	CYP3A94 (ENSECAG00000030572)	ENSECAG00000044062	ENSECAG00000048533	CYP3A89 (ENSECAG00000024477)	ENSECAG00000058608	ENSECAG00000046571	ENSECAG00000037404	ENSECAG00000048286	ZSCAN25 (ENSECAG00000019610)	ENSECAG00000058567
Chiroptera	ANCESTRAL SPECIES	37	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00530000064242.b
Megabat	MODERN SPECIES	2690																RCC1L (ENSPVAG00000013069) #22	CASTOR2 (ENSPVAG00000013064) #23
Microchiroptera	ANCESTRAL SPECIES	39	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059.l	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00530000064242.b
Microbat	MODERN SPECIES	982	STX1A (ENSMLUG00000010785) #7	ABHD11 (ENSMLUG00000027141) #8	CLDN4 (ENSMLUG00000002217)	METTL27 (ENSMLUG00000002222) #9	ENSMLUG00000028759 #10	ELN (ENSMLUG00000000398) #11	LIMK1 (ENSMLUG00000000411) #12	EIF4H (ENSMLUG00000009053) #13	LAT2 (ENSMLUG00000029224) #14	RFC2 (ENSMLUG00000004557) #15	GTF2IRD1 (ENSMLUG00000001668) #18	CLIP2 (ENSMLUG00000001660) #17	GTF2I (ENSMLUG00000002844) #19	ENSMLUG00000000233 #20	ENSMLUG00000024497 #21	RCC1L (ENSMLUG00000014984) #22	CASTOR2 (ENSMLUG00000014977) #23	ENSMLUG00000025244	ENSMLUG00000004614	GALNT17 (ENSMLUG00000000924)	CALN1 (ENSMLUG00000000932)	ENSMLUG00000013582	SBDS (ENSMLUG00000013575)	TMEM248 (ENSMLUG00000000616)	RABGEF1 (ENSMLUG00000000605)	KCTD7 (ENSMLUG00000024757)	TPST1 (ENSMLUG00000030532)	ENSMLUG00000028812	CRCP (ENSMLUG00000012217)	ASL (ENSMLUG00000023612)	GUSB (ENSMLUG00000008449)
Greater horseshoe bat	MODERN SPECIES	25	ABHD11 (ENSRFEG00010010388) #8	CLDN3 (ENSRFEG00010010434)	CLDN4 (ENSRFEG00010010457)	METTL27 (ENSRFEG00010010469) #9	TMEM270 (ENSRFEG00010010504) #10	ELN (ENSRFEG00010010637) #11	LIMK1 (ENSRFEG00010011899) #12	EIF4H (ENSRFEG00010012016) #13	LAT2 (ENSRFEG00010012099) #14	RFC2 (ENSRFEG00010012149) #15	CLIP2 (ENSRFEG00010012561) #17	GTF2IRD1 (ENSRFEG00010012756) #18	GTF2I (ENSRFEG00010012906) #19	NCF1 (ENSRFEG00010013163) #20	ENSRFEG00010013199 #21	RCC1L (ENSRFEG00010013306) #22	CASTOR2 (ENSRFEG00010013653) #23	AUTS2 (ENSRFEG00010013746)	GALNT17 (ENSRFEG00010014950)	CALN1 (ENSRFEG00010015179)	ENSRFEG00010015314	SBDS (ENSRFEG00010015873)	TMEM248 (ENSRFEG00010015962)	RABGEF1 (ENSRFEG00010016017)	KCTD7 (ENSRFEG00010016084)	TPST1 (ENSRFEG00010016187)	ENSRFEG00010016241	ENSRFEG00010016258	CRCP (ENSRFEG00010016318)	ASL (ENSRFEG00010016502)	GUSB (ENSRFEG00010016643)
Atlantogenata	ANCESTRAL SPECIES	82	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00440000038159
Xenarthra	ANCESTRAL SPECIES	415																ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000165238	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000165416	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00940000153883.b
Armadillo	MODERN SPECIES	2075																RCC1L (ENSDNOG00000002341) #22	CASTOR2 (ENSDNOG00000005072) #23	ENSDNOG00000002616	ENSDNOG00000044575	ENSDNOG00000033531	ENSDNOG00000044464
Afrotheria	ANCESTRAL SPECIES	95	ENSGT01030000234627.a.a.c #7	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00440000038159
Afrotheria_a	ANCESTRAL SPECIES	99	ENSGT01030000234627.a.a.c #7	ENSGT00390000015880 #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000162266 #21	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00940000153883.b	ENSGT00940000154540.a	ENSGT00940000161327	ENSGT00390000006030.d.a.b	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00390000001752	ENSGT00940000157044	ENSGT00440000038159
Elephant	MODERN SPECIES	403	ABHD11 (ENSLAFG00000029924) #8	CLDN3 (ENSLAFG00000012473)	CLDN4 (ENSLAFG00000015629)	METTL27 (ENSLAFG00000028886) #9	TMEM270 (ENSLAFG00000007056) #10	LIMK1 (ENSLAFG00000001533) #12	EIF4H (ENSLAFG00000010578) #13	ENSLAFG00000010580 #14	RFC2 (ENSLAFG00000010586) #15	CLIP2 (ENSLAFG00000004729) #17	GTF2IRD1 (ENSLAFG00000006505) #18	ENSLAFG00000032552	GTF2I (ENSLAFG00000003646) #19	NCF1 (ENSLAFG00000017320) #20	ENSLAFG00000013081 #21	RCC1L (ENSLAFG00000031924) #22	CASTOR2 (ENSLAFG00000028140) #23	ENSLAFG00000026009	ENSLAFG00000015447	GALNT17 (ENSLAFG00000017711)	CALN1 (ENSLAFG00000016544)	ENSLAFG00000022281	SBDS (ENSLAFG00000008763)	TMEM248 (ENSLAFG00000008767)	RABGEF1 (ENSLAFG00000007009)	KCTD7 (ENSLAFG00000031324)	TPST1 (ENSLAFG00000029219)	CRCP (ENSLAFG00000027377)	ASL (ENSLAFG00000014828)	GUSB (ENSLAFG00000022591)	VKORC1L1 (ENSLAFG00000002079)
Hyrax	MODERN SPECIES	5726																RCC1L (ENSPCAG00000016129) #22
Tenrec	MODERN SPECIES	6759																RCC1L (ENSETEG00000009514) #22
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00390000015880.g #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000161621.A.a.b.a.m	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000158139	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339.k	ENSGT00440000038159	ENSGT00530000064242.b	ENSGT00940000157044
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00390000015880.g #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00730000111510 #11	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000161621.A.a.b.a.m	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000158139	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339.k	ENSGT00440000038159	ENSGT00530000064242.b	ENSGT00940000157044
Diprotodontia	ANCESTRAL SPECIES	5	ENSGT00390000015880.h.a #8	ENSGT00390000015880.h.b #8	ENSGT00390000015880.g #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000158139	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000154631	ENSGT00440000038159.k	ENSGT00530000064242.b	ENSGT00940000157044
Diprotodontia_a	ANCESTRAL SPECIES	6	ENSGT00390000015880.h.a #8	ENSGT00390000015880.h.b #8	ENSGT00390000015880.g #8	ENSGT00940000162095	ENSGT00940000154762.a.b	ENSGT00530000063975 #9	ENSGT00390000009243 #10	ENSGT00940000156345 #12	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000158139	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000154631	ENSGT00440000038159.k	ENSGT00530000064242.b	ENSGT00940000157044
Common wonbat	MODERN SPECIES	1007	ENSVURG00010003971 #8	ENSVURG00010003989 #8	ENSVURG00010004024 #8	CLDN3 (ENSVURG00010004044)	CLDN4 (ENSVURG00010004047)	ENSVURG00010004049 #9	ENSVURG00010004082 #10	LIMK1 (ENSVURG00010004129) #12	EIF4H (ENSVURG00010004157) #13	ENSVURG00010004177 #14	RFC2 (ENSVURG00010004205) #15	CLIP2 (ENSVURG00010004228) #17	GTF2IRD1 (ENSVURG00010004286) #18	GTF2I (ENSVURG00010004452) #19	NCF1 (ENSVURG00010004576) #20	RCC1L (ENSVURG00010004599) #22	CASTOR2 (ENSVURG00010004680) #23	PHKG1 (ENSVURG00010004704)	ENSVURG00010004740	AUTS2 (ENSVURG00010004785)	GALNT17 (ENSVURG00010004853)	CALN1 (ENSVURG00010004945)	ENSVURG00010005017	SBDS (ENSVURG00010005041)	ENSVURG00010005067	NIPSNAP2 (ENSVURG00010005157)	PSPH (ENSVURG00010005186)	ENSVURG00010005202	ENSVURG00010005245	NUPR2 (ENSVURG00010005251)	VKORC1L1 (ENSVURG00010005257)
koala	MODERN SPECIES	109	ENSPCIG00000017237	ENSPCIG00000036907 #8	ENSPCIG00000036090 #8	ENSPCIG00000017239 #8	CLDN3 (ENSPCIG00000017241)	CLDN4 (ENSPCIG00000017243)	ENSPCIG00000017244 #10	LIMK1 (ENSPCIG00000017250) #12	EIF4H (ENSPCIG00000017251) #13	ENSPCIG00000017253 #14	RFC2 (ENSPCIG00000017254) #15	CLIP2 (ENSPCIG00000006357) #17	GTF2IRD1 (ENSPCIG00000015133) #18	GTF2I (ENSPCIG00000020187) #19	NCF1 (ENSPCIG00000001536) #20	RCC1L (ENSPCIG00000001588) #22	CASTOR2 (ENSPCIG00000001615) #23	PHKG1 (ENSPCIG00000024720)	ENSPCIG00000032670
Wallaby	MODERN SPECIES	8300															ENSMEUG00000007266 #20	RCC1L (ENSMEUG00000007276) #22	CASTOR2 (ENSMEUG00000007292) #23
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000007123 #8	ENSSHAG00000024429 #8	CLDN3 (ENSSHAG00000031855)	CLDN4 (ENSSHAG00000028440)	METTL27 (ENSSHAG00000004814) #9	ENSSHAG00000004368 #10	ELN (ENSSHAG00000001131) #11	LIMK1 (ENSSHAG00000002136) #12	EIF4H (ENSSHAG00000023445) #13	RFC2 (ENSSHAG00000004520) #15	ENSSHAG00000024237	CLIP2 (ENSSHAG00000005752) #17	GTF2IRD1 (ENSSHAG00000027046) #18	GTF2I (ENSSHAG00000001252) #19	ENSSHAG00000005718 #20	ENSSHAG00000021655 #22	ENSSHAG00000029493 #23	ENSSHAG00000023025	ENSSHAG00000028263	ENSSHAG00000009443	ENSSHAG00000029485	CALN1 (ENSSHAG00000030811)	ENSSHAG00000020855	ENSSHAG00000010346	MRPS17 (ENSSHAG00000030044)	ENSSHAG00000009627	PSPH (ENSSHAG00000009336)	ENSSHAG00000029601	ENSSHAG00000031047	ENSSHAG00000024642	ENSSHAG00000022433
Opossum	MODERN SPECIES	1	GOSR1 (ENSMODG00000041802)	CPD (ENSMODG00000009938)	ENSMODG00000038151	ENSMODG00000048479	ENSMODG00000023173	TMIGD1 (ENSMODG00000009919)	BLMH (ENSMODG00000009909)	SLC6A4 (ENSMODG00000009884)	NSRP1 (ENSMODG00000009868)	ENSMODG00000009859	SSH2 (ENSMODG00000009679)	CORO6 (ENSMODG00000009661)	ANKRD13B (ENSMODG00000009623)	GTF2I (ENSMODG00000007022) #19	NCF1 (ENSMODG00000006952) #20	RCC1L (ENSMODG00000006921) #22	CASTOR2 (ENSMODG00000006907) #23	ENSMODG00000006892	PHKG1 (ENSMODG00000043196)	AUTS2 (ENSMODG00000006856)	GALNT17 (ENSMODG00000006826)	CALN1 (ENSMODG00000006694)	ENSMODG00000025697	SBDS (ENSMODG00000006644)	ENSMODG00000006634	MRPS17 (ENSMODG00000039936)	NIPSNAP2 (ENSMODG00000006605)	PSPH (ENSMODG00000006585)	ENSMODG00000006565	CHCHD2 (ENSMODG00000051016)	NUPR2 (ENSMODG00000023179)
Platypus	MODERN SPECIES	8	ATP2A3 (ENSOANG00000039300)	ZZEF1 (ENSOANG00000002387)	CYB5D2 (ENSOANG00000043791)	ANKFY1 (ENSOANG00000042469)	UBE2G1 (ENSOANG00000001220)	ENSOANG00000001961	ENSOANG00000042384	ENSOANG00000005329	EIF4H (ENSOANG00000004334) #13	ENSOANG00000036025 #14	RFC2 (ENSOANG00000007330) #15	CLIP2 (ENSOANG00000004486) #17	GTF2IRD1 (ENSOANG00000006511) #18	GTF2I (ENSOANG00000012919) #19	NCF1 (ENSOANG00000049658) #20	ENSOANG00000051134 #22	CASTOR2 (ENSOANG00000041189) #23	ENSOANG00000045093	GALNT17 (ENSOANG00000049758)	ENSOANG00000037456	ENSOANG00000040776	SBDS (ENSOANG00000007674)	ENSOANG00000007675	MRPS17 (ENSOANG00000046653)	ENSOANG00000001841	PSPH (ENSOANG00000039515)	CCT6B (ENSOANG00000010444)	SUMF2 (ENSOANG00000010443)	PHKG1 (ENSOANG00000010442)	CHCHD2 (ENSOANG00000049242)	VKORC1L1 (ENSOANG00000045594)
Sauria	ANCESTRAL SPECIES	18	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339	ENSGT00390000008983.b	ENSGT00940000162897	ENSGT00940000158139	ENSGT00440000038159
Lepidosauria	ANCESTRAL SPECIES	16	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339	ENSGT00390000008983.b	ENSGT00940000158139	ENSGT00440000038159	ENSGT00960000192991
Episquamata	ANCESTRAL SPECIES	13	ENSGT00550000074975	ENSGT00940000160149	ENSGT00940000163794	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00940000158096	ENSGT00390000015205	ENSGT00940000160935	ENSGT00430000031027.b	ENSGT00390000012485.a.b	ENSGT00940000155039	ENSGT00510000048287	ENSGT00940000159315	ENSGT00950000183143.d	ENSGT00390000003413	ENSGT00390000007149
Laterata	ANCESTRAL SPECIES	18	ENSGT00550000074975	ENSGT00940000160149	ENSGT00940000163794	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00550000075050 #15	ENSGT00940000159426.h #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00940000158096	ENSGT00390000015205	ENSGT00940000160935	ENSGT00430000031027.b	ENSGT00390000012485.a.b	ENSGT00940000155039	ENSGT00510000048287	ENSGT00940000159315	ENSGT00950000183143.d	ENSGT00390000003413	ENSGT00390000007149
Common wall lizard	MODERN SPECIES	6	ENSPMRG00000015943	ENSPMRG00000015934	ENSPMRG00000015923	ANKFY1 (ENSPMRG00000015908)	ENSPMRG00000015900	UBE2G1 (ENSPMRG00000015890)	ENSPMRG00000015862	SPNS2 (ENSPMRG00000015831)	MYBBP1A (ENSPMRG00000015802)	EIF4H (ENSPMRG00000015786) #13	RFC2 (ENSPMRG00000015759) #15	ENSPMRG00000015740 #17	CLIP2 (ENSPMRG00000015722) #17	GTF2I (ENSPMRG00000015603) #19	NCF1 (ENSPMRG00000015568) #20	RCC1L (ENSPMRG00000015564) #22	CASTOR2 (ENSPMRG00000023085) #23	AUTS2 (ENSPMRG00000023006)	GALNT17 (ENSPMRG00000022954)	CALN1 (ENSPMRG00000022951)	ENSPMRG00000022948	WSCD1 (ENSPMRG00000022943)	ENSPMRG00000022940	ENSPMRG00000022937	ENSPMRG00000022934	EXO5 (ENSPMRG00000022921)	RAP1GAP2 (ENSPMRG00000022903)	CCDC92B (ENSPMRG00000022892)	CLUH (ENSPMRG00000022884)	PAFAH1B1 (ENSPMRG00000022876)	ENSPMRG00000022869
Argentine black and white tegu	MODERN SPECIES	152																RCC1L (ENSSMRG00000017910) #22	CASTOR2 (ENSSMRG00000017911) #23	AUTS2 (ENSSMRG00000017913)	RHBDD2 (ENSSMRG00000000082)	ZZEF1 (ENSSMRG00000000143)
Toxicofera	ANCESTRAL SPECIES	23	ENSGT00550000074975	ENSGT00940000160149	ENSGT00940000163794	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00940000158096	ENSGT00390000015205	ENSGT00940000160935	ENSGT00430000031027.b	ENSGT00390000012485.a.b	ENSGT00940000155039	ENSGT00510000048287	ENSGT00940000159315	ENSGT00950000183143.d	ENSGT00390000003413	ENSGT00390000007149
Elapidae	ANCESTRAL SPECIES	20	ENSGT00550000074975	ENSGT00940000160149	ENSGT00940000163794	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00550000075050.l #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014.t	ENSGT00940000159212.a	ENSGT00940000158096	ENSGT00390000015205	ENSGT00940000160935	ENSGT00430000031027.b	ENSGT00390000012485.a.b	ENSGT00940000155039	ENSGT00510000048287	ENSGT00940000159315	ENSGT00950000183143.d	ENSGT00390000003413	ENSGT00390000007149
Elapidae_a	ANCESTRAL SPECIES	20	ENSGT00550000074975	ENSGT00940000160149	ENSGT00940000163794	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00550000075050.l #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014.t	ENSGT00940000159212.a	ENSGT00940000158096	ENSGT00390000015205	ENSGT00940000160935	ENSGT00430000031027.b	ENSGT00390000012485.a.b	ENSGT00940000155039	ENSGT00510000048287	ENSGT00940000159315	ENSGT00950000183143.d	ENSGT00390000003413	ENSGT00390000007149.a
Acanthophiinae	ANCESTRAL SPECIES	11	ENSGT00550000074975	ENSGT00940000160149	ENSGT00940000163794	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00550000075050.l #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014.t	ENSGT00940000159212.a	ENSGT00940000158096	ENSGT00390000015205	ENSGT00940000160935	ENSGT00430000031027.b	ENSGT00390000012485.a.b	ENSGT00940000155039	ENSGT00510000048287	ENSGT00940000159315	ENSGT00950000183143.d	ENSGT00390000003413	ENSGT00390000007149.a
Mainland tiger snake	MODERN SPECIES	44	ENSNSUG00000008040	ENSNSUG00000008039	ENSNSUG00000008038	CYB5D2 (ENSNSUG00000008037)	ANKFY1 (ENSNSUG00000008033)	UBE2G1 (ENSNSUG00000008032)	SPNS3 (ENSNSUG00000008029)	SPNS2 (ENSNSUG00000008018)	MYBBP1A (ENSNSUG00000008017)	EIF4H (ENSNSUG00000008016) #13	RFC2 (ENSNSUG00000008003) #15	CLIP2 (ENSNSUG00000007996) #17	GTF2IRD1 (ENSNSUG00000007987) #18	GTF2I (ENSNSUG00000007985) #19	NCF1 (ENSNSUG00000007984) #20	RCC1L (ENSNSUG00000007983) #22	CASTOR2 (ENSNSUG00000007979) #23	AUTS2 (ENSNSUG00000007971)	GALNT17 (ENSNSUG00000007967)	CALN1 (ENSNSUG00000007965)	ENSNSUG00000007964	WSCD1 (ENSNSUG00000007962)
Eastern brown snake	MODERN SPECIES	40	ENSPTXG00000003304	ENSPTXG00000003303	ENSPTXG00000003299	CYB5D2 (ENSPTXG00000003297)	ANKFY1 (ENSPTXG00000003295)	UBE2G1 (ENSPTXG00000003293)	SPNS3 (ENSPTXG00000003247)	SPNS2 (ENSPTXG00000003243)	MYBBP1A (ENSPTXG00000003241)	EIF4H (ENSPTXG00000003240) #13	RFC2 (ENSPTXG00000003239) #15	ENSPTXG00000003197 #17	GTF2IRD1 (ENSPTXG00000003196) #18	GTF2I (ENSPTXG00000003195) #19	NCF1 (ENSPTXG00000003194) #20	RCC1L (ENSPTXG00000003193) #22	CASTOR2 (ENSPTXG00000003192) #23	AUTS2 (ENSPTXG00000003191)	ENSPTXG00000003189	GALNT17 (ENSPTXG00000003188)	CALN1 (ENSPTXG00000003185)
Blue-lipped sea krait	MODERN SPECIES	7954																RCC1L (ENSLLTG00000010283) #22	CASTOR2 (ENSLLTG00000006044) #23
Indian cobra	MODERN SPECIES		ENSNNAG00000006477	ENSNNAG00000006461	CYB5D2 (ENSNNAG00000006452)	ANKFY1 (ENSNNAG00000006271)	UBE2G1 (ENSNNAG00000006195)	SPNS3 (ENSNNAG00000006170)	SPNS2 (ENSNNAG00000005948)	MYBBP1A (ENSNNAG00000005855)	EIF4H (ENSNNAG00000005814) #13	RFC2 (ENSNNAG00000005307) #15	CLIP2 (ENSNNAG00000005110) #17	GTF2IRD1 (ENSNNAG00000004884) #18	GTF2I (ENSNNAG00000004792) #19	NCF1 (ENSNNAG00000004761) #20	ENSNNAG00000004744	RCC1L (ENSNNAG00000004705) #22	CASTOR2 (ENSNNAG00000004676) #23	AUTS2 (ENSNNAG00000004425)	ENSNNAG00000004387	ENSNNAG00000004361	ENSNNAG00000004335	CALN1 (ENSNNAG00000004308)	WSCD1 (ENSNNAG00000004272)	EXO5 (ENSNNAG00000004246)	RAP1GAP2 (ENSNNAG00000002824)	CCDC92B (ENSNNAG00000002683)	CLUH (ENSNNAG00000001785)	ENSNNAG00000001573	PAFAH1B1 (ENSNNAG00000001561)	MNT (ENSNNAG00000001544)	SGSM2 (ENSNNAG00000000563)
Lizard	DUPLICATION
Lizard	MODERN SPECIES	656																ENSACAG00000027886 #22
Lizard	MODERN SPECIES	2044																ENSACAG00000009407 #22	ENSACAG00000009428 #23
tuatara	MODERN SPECIES	1934								RFC2 (ENSSPUG00000006039) #15	CLIP2 (ENSSPUG00000006132) #17	GTF2IRD1 (ENSSPUG00000006483) #18	ENSSPUG00000006540 #19	ENSSPUG00000006565 #19	ENSSPUG00000006593 #19	ENSSPUG00000006607 #19	NCF1 (ENSSPUG00000006618) #20	RCC1L (ENSSPUG00000006636) #22	CASTOR2 (ENSSPUG00000006657) #23
Archelosauria	ANCESTRAL SPECIES	18	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00960000192456	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339	ENSGT00390000008983.b	ENSGT00940000162897	ENSGT00940000158139	ENSGT00440000038159.ic
Archosauria	ANCESTRAL SPECIES	18	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00960000192456	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339	ENSGT00390000008983.b	ENSGT00940000162897	ENSGT00940000158139	ENSGT00440000038159.ic
Aves	ANCESTRAL SPECIES	18	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00960000187204	ENSGT00940000157152.C	ENSGT00940000156345 #12	ENSGT00730000111510 #11	ENSGT00530000063975 #9	ENSGT00940000165067	ENSGT00940000154762.a.b	ENSGT00940000162095	ENSGT00390000015880 #8
African ostrich	MODERN SPECIES	734	ATP2A3 (ENSSCUG00000011092)	ZZEF1 (ENSSCUG00000011105)	CYB5D2 (ENSSCUG00000011122)	ANKFY1 (ENSSCUG00000011124)	ENSSCUG00000011126	UBE2G1 (ENSSCUG00000011127)	SPNS3 (ENSSCUG00000011136)	SPNS2 (ENSSCUG00000011141)	MYBBP1A (ENSSCUG00000011147)	EIF4H (ENSSCUG00000011152) #13	RFC2 (ENSSCUG00000011158) #15	CLIP2 (ENSSCUG00000011160) #17	GTF2IRD1 (ENSSCUG00000011163) #18	GTF2I (ENSSCUG00000011166) #19	NCF1 (ENSSCUG00000011167) #20	RCC1L (ENSSCUG00000011169) #22	CASTOR2 (ENSSCUG00000011171) #23	AUTS2 (ENSSCUG00000011182)	GALNT17 (ENSSCUG00000011185)	CALN1 (ENSSCUG00000011187)	ENSSCUG00000011188	SBDS (ENSSCUG00000011189)	ENSSCUG00000011190	ENSSCUG00000011191	LIMK1 (ENSSCUG00000011195) #12	ELN (ENSSCUG00000011200) #11	METTL27 (ENSSCUG00000011217) #9	ENSSCUG00000011219	CLDN4 (ENSSCUG00000011221)	CLDN3 (ENSSCUG00000011223)	ABHD11 (ENSSCUG00000011224) #8
Neognathae	ANCESTRAL SPECIES	18	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00960000187204	ENSGT00940000157152.C	ENSGT00940000156345 #12	ENSGT00730000111510 #11	ENSGT00530000063975 #9	ENSGT00940000165067	ENSGT00940000154762.a.b	ENSGT00940000162095	ENSGT00390000015880 #8
Galloanserae	ANCESTRAL SPECIES	17	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00960000187204	ENSGT00940000157152.C	ENSGT00940000156345 #12	ENSGT00730000111510 #11	ENSGT00530000063975 #9	ENSGT00940000165067	ENSGT00940000154762.a.b	ENSGT00940000162095	ENSGT00390000015880 #8
Phasianidae	ANCESTRAL SPECIES	17	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00960000187204	ENSGT00940000157152.C	ENSGT00940000156345 #12	ENSGT00730000111510 #11	ENSGT00530000063975 #9	ENSGT00940000165067	ENSGT00940000154762.a.b	ENSGT00940000162095	ENSGT00390000015880 #8
Phasianidae_b	ANCESTRAL SPECIES	17	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00960000187204	ENSGT00940000157152.C	ENSGT00940000156345 #12	ENSGT00730000111510 #11	ENSGT00530000063975 #9	ENSGT00940000165067	ENSGT00940000154762.a.b	ENSGT00940000162095	ENSGT00390000015880 #8
Chicken	MODERN SPECIES	10	ATP2A3 (ENSGALG00010029576)	ZZEF1 (ENSGALG00010029166)	CYB5D2 (ENSGALG00010029164)	ANKFY1 (ENSGALG00010029163)	UBE2G1 (ENSGALG00010029429)	SPNS3 (ENSGALG00010029427)	SPNS2 (ENSGALG00010029425)	MYBBP1A (ENSGALG00010029423)	EIF4H (ENSGALG00010029422) #13	LAT2 (ENSGALG00010029420) #14	RFC2 (ENSGALG00010029419) #15	CLIP2 (ENSGALG00010029385) #17	GTF2IRD1 (ENSGALG00010029382) #18	GTF2I (ENSGALG00010029379) #19	NCF1C (ENSGALG00010029377) #20	RCC1L (ENSGALG00010029374) #22	GATSL2 (ENSGALG00010029373) #23	AUTS2 (ENSGALG00010029371)	GALNT17 (ENSGALG00010029579)	CALN1 (ENSGALG00010029174)	ENSGALG00010029171	SBDS (ENSGALG00010029169)	ENSGALG00010029589	ENSGALG00010029587	ENSGALG00010029585	LIMK1 (ENSGALG00010029583) #12	ELN (ENSGALG00010029162) #11	METTL27 (ENSGALG00010029609) #9	CLDN9 (ENSGALG00010029608)	CLDN3 (ENSGALG00010029784)	ABHD11 (ENSGALG00010029606) #8
Turkey	MODERN SPECIES	13	ELN (ENSMGAG00000018468) #11	ENSMGAG00000002030 #12	ENSMGAG00000002119	ENSMGAG00000002095	ENSMGAG00000002059	ENSMGAG00000002176	ENSMGAG00000020414	ENSMGAG00000022206	ENSMGAG00000018188	ENSMGAG00000002249	ENSMGAG00000020187	ENSMGAG00000002275	ENSMGAG00000019842	ENSMGAG00000019271	ENSMGAG00000002311 #23	ENSMGAG00000002321 #22	ENSMGAG00000017607	ENSMGAG00000002357 #20	ENSMGAG00000022587 #19	GTF2IRD1 (ENSMGAG00000016801) #18	LAT2 (ENSMGAG00000002504) #14	ENSMGAG00000002487 #15	CLIP2 (ENSMGAG00000002462) #17	ENSMGAG00000002508 #13	ENSMGAG00000002552	ENSMGAG00000016432	ENSMGAG00000002649	ENSMGAG00000002721	ENSMGAG00000022757	ENSMGAG00000002751	ENSMGAG00000002812
Japanese quail	MODERN SPECIES	10	P2RX1 (ENSCJPG00005009310)	ATP2A3 (ENSCJPG00005009291)	ZZEF1 (ENSCJPG00005008969)	ENSCJPG00005008968	ANKFY1 (ENSCJPG00005008910)	UBE2G1 (ENSCJPG00005008909)	SPNS3 (ENSCJPG00005008893)	SPNS2 (ENSCJPG00005008892)	MYBBP1A (ENSCJPG00005008886)	EIF4H (ENSCJPG00005008884) #13	RFC2 (ENSCJPG00005008883) #15	CLIP2 (ENSCJPG00005008240) #17	GTF2IRD1 (ENSCJPG00005008090) #18	GTF2I (ENSCJPG00005004854) #19	NCF1 (ENSCJPG00005004840) #20	RCC1L (ENSCJPG00005004730) #22	CASTOR2 (ENSCJPG00005004678) #23	ENSCJPG00005004672	ENSCJPG00005004663	ENSCJPG00005004662	AUTS2 (ENSCJPG00005004641)	GALNT17 (ENSCJPG00005004631)	CALN1 (ENSCJPG00005004626)	ENSCJPG00005004625	SBDS (ENSCJPG00005004624)	ENSCJPG00005004623	ENSCJPG00005004366	LIMK1 (ENSCJPG00005004351) #12	ENSCJPG00005004345 #11	METTL27 (ENSCJPG00005004343) #9	ENSCJPG00005004341
Anatidae	ANCESTRAL SPECIES	27	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000176156	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00960000187204	ENSGT00940000157152.C	ENSGT00940000156345 #12	ENSGT00730000111510 #11	ENSGT00530000063975 #9	ENSGT00940000165067	ENSGT00940000154762.a.b	ENSGT00940000162095	ENSGT00390000015880 #8
Pink-footed goose	MODERN SPECIES	38	ATP2A3 (ENSABRG00000010274)	ZZEF1 (ENSABRG00000009821)	ENSABRG00000009751	ANKFY1 (ENSABRG00000009345)	UBE2G1 (ENSABRG00000009258)	SPNS3 (ENSABRG00000009236)	SPNS2 (ENSABRG00000009199)	MYBBP1A (ENSABRG00000009125)	EIF4H (ENSABRG00000009068) #13	LAT2 (ENSABRG00000009035) #14	RFC2 (ENSABRG00000009004) #15	CLIP2 (ENSABRG00000008970) #17	GTF2IRD1 (ENSABRG00000008860) #18	GTF2I (ENSABRG00000007888) #19	NCF1 (ENSABRG00000007694) #20	RCC1L (ENSABRG00000007423) #22	CASTOR2 (ENSABRG00000007417) #23	AUTS2 (ENSABRG00000007375)	GALNT17 (ENSABRG00000007347)	CALN1 (ENSABRG00000007334)	ENSABRG00000007318	SBDS (ENSABRG00000007309)	ENSABRG00000007294	ENSABRG00000007279	LIMK1 (ENSABRG00000007266) #12	ELN (ENSABRG00000007208) #11	METTL27 (ENSABRG00000007200) #9	ENSABRG00000007197	CLDN4 (ENSABRG00000007192)	CLDN3 (ENSABRG00000007188)	ABHD11 (ENSABRG00000007182) #8
Duck	MODERN SPECIES	11	ENSAPLG00000028591	ZZEF1 (ENSAPLG00000006501)	CYB5D2 (ENSAPLG00000007714)	ANKFY1 (ENSAPLG00000007717)	ENSAPLG00000022341	UBE2G1 (ENSAPLG00000023425)	SPNS3 (ENSAPLG00000008205)	SPNS2 (ENSAPLG00000008372)	MYBBP1A (ENSAPLG00000008534)	EIF4H (ENSAPLG00000009166) #13	RFC2 (ENSAPLG00000009389) #15	CLIP2 (ENSAPLG00000010136) #17	GTF2IRD1 (ENSAPLG00000006811) #18	ENSAPLG00000028519 #19	NCF1 (ENSAPLG00000005084) #20	RCC1L (ENSAPLG00000004807) #22	CASTOR2 (ENSAPLG00000004635) #23	AUTS2 (ENSAPLG00000004514)	GALNT17 (ENSAPLG00000004368)	CALN1 (ENSAPLG00000015773)	ENSAPLG00000015683	METTL27 (ENSAPLG00000028295) #9	CLDN4 (ENSAPLG00000028173)	MTMR4 (ENSAPLG00000012976)	HSF5 (ENSAPLG00000012874)	RNF43 (ENSAPLG00000012554)	SUPT4H1 (ENSAPLG00000012497)	ENSAPLG00000011861	EPX (ENSAPLG00000010848)	ENSAPLG00000030435	ENSAPLG00000010731
Neognathae_b	ANCESTRAL SPECIES	20	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349.j #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00960000187204	ENSGT00940000157152.C	ENSGT00940000156345 #12	ENSGT00730000111510 #11	ENSGT00530000063975 #9	ENSGT00940000165067	ENSGT00940000162095	ENSGT00390000015880 #8	ENSGT00940000162428
Neognathae_c	ANCESTRAL SPECIES	22	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a.e	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00960000190794	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349.j #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00960000187204	ENSGT00940000157152.C	ENSGT00940000156345 #12	ENSGT00530000063975 #9	ENSGT00940000165067	ENSGT00940000162095	ENSGT00390000015880 #8	ENSGT00940000162428	ENSGT00940000158976
Kakapo	MODERN SPECIES	58	DHX40 (ENSSHBG00005014811)	YPEL2 (ENSSHBG00005014887)	GDPD1 (ENSSHBG00005014893)	SMG8 (ENSSHBG00005014901)	SKA2 (ENSSHBG00005014915)	ENSSHBG00005015000	SPNS3 (ENSSHBG00005016108)	SPNS2 (ENSSHBG00005016109)	MYBBP1A (ENSSHBG00005016115)	EIF4H (ENSSHBG00005016124) #13	RFC2 (ENSSHBG00005016129) #15	CLIP2 (ENSSHBG00005016134) #17	GTF2IRD1 (ENSSHBG00005016143) #18	GTF2I (ENSSHBG00005016150) #19	NCF1 (ENSSHBG00005016163) #20	RCC1L (ENSSHBG00005016169) #22	CASTOR2 (ENSSHBG00005016173) #23	AUTS2 (ENSSHBG00005016191)	GALNT17 (ENSSHBG00005016284)	CALN1 (ENSSHBG00005016297)	ENSSHBG00005016304	P2RX5 (ENSSHBG00005016312)	EMC6 (ENSSHBG00005016316)	TAX1BP3 (ENSSHBG00005016319)	CTNS (ENSSHBG00005001119)	SHPK (ENSSHBG00005001121)	TRPV1 (ENSSHBG00005012678)	TRPV3 (ENSSHBG00005012773)	ASPA (ENSSHBG00005012943)	SPATA22 (ENSSHBG00005012965)	ENSSHBG00005012987
Golden eagle	MODERN SPECIES	1	ZZEF1 (ENSACCG00020010320)	CYB5D2 (ENSACCG00020010294)	ANKFY1 (ENSACCG00020010275)	UBE2G1 (ENSACCG00020010258)	SPNS3 (ENSACCG00020010241)	SPNS2 (ENSACCG00020010216)	MYBBP1A (ENSACCG00020010190)	EIF4H (ENSACCG00020010170) #13	ENSACCG00020010162	RFC2 (ENSACCG00020010149) #15	CLIP2 (ENSACCG00020010126) #17	GTF2IRD1 (ENSACCG00020010086) #18	GTF2I (ENSACCG00020010033) #19	NCF1 (ENSACCG00020010007) #20	ENSACCG00020009997	RCC1L (ENSACCG00020009969) #22	CASTOR2 (ENSACCG00020009930) #23	ENSACCG00020009919	AUTS2 (ENSACCG00020009820)	ENSACCG00020009697	GALNT17 (ENSACCG00020009681)	CALN1 (ENSACCG00020009656)	ENSACCG00020009608	SBDS (ENSACCG00020009565)	ENSACCG00020009553	ENSACCG00020009544	LIMK1 (ENSACCG00020009479) #12	ENSACCG00020009359	METTL27 (ENSACCG00020009304) #9	ENSACCG00020009299	ENSACCG00020009288
Passeriformes	ANCESTRAL SPECIES	18	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000163551.c.b	ENSGT00940000163551.c.a	ENSGT00940000164607	ENSGT00950000183012.B.a	ENSGT00510000048685	ENSGT00390000014737	ENSGT01030000234627.a.a.c.r #7	ENSGT00510000047471	ENSGT00940000159414 #18	ENSGT00940000160349.j #19	ENSGT00940000160349.i #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00960000187204	ENSGT00940000157152.C	ENSGT00940000156345.g #12	ENSGT00730000111510 #11	ENSGT00530000063975 #9	ENSGT00940000165067	ENSGT00940000162095	ENSGT00390000015880 #8	ENSGT00940000158976
Great tit	MODERN SPECIES	9	ENSPMJG00000018933 #14	RFC2 (ENSPMJG00000018932) #15	CLIP2 (ENSPMJG00000018931) #17	ENSPMJG00000018925	ENSPMJG00000018924	ENSPMJG00000018923	VPS37D (ENSPMJG00000018922)	DNAJC30 (ENSPMJG00000018921)	BUD23 (ENSPMJG00000018919)	STX1A (ENSPMJG00000018918) #7	MKS1 (ENSPMJG00000018917)	GTF2IRD1 (ENSPMJG00000018889) #18	ENSPMJG00000018888 #19	ENSPMJG00000018885 #19	NCF1 (ENSPMJG00000018884) #20	RCC1L (ENSPMJG00000018883) #22	CASTOR2 (ENSPMJG00000018882) #23	AUTS2 (ENSPMJG00000018874)	GALNT17 (ENSPMJG00000018872)	CALN1 (ENSPMJG00000018871)	ENSPMJG00000018870	SBDS (ENSPMJG00000018869)	ENSPMJG00000018868	ENSPMJG00000018867	LIMK1 (ENSPMJG00000018865) #12	ELN (ENSPMJG00000018863) #11	ENSPMJG00000018860 #9	ENSPMJG00000018859	ENSPMJG00000018858	CLDN3 (ENSPMJG00000018857)	ABHD11 (ENSPMJG00000018856) #8
Passeriformes_d	ANCESTRAL SPECIES	18	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00990000204431	ENSGT00940000163551.c.b	ENSGT00940000163551.c.a	ENSGT00940000164607.c	ENSGT00950000183012.B.a.a	ENSGT00510000048685	ENSGT00390000014737	ENSGT01030000234627.a.a.c.r #7	ENSGT00510000047471	ENSGT00940000159414 #18	ENSGT00940000160349.j #19	ENSGT00940000160349.i #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00960000187204	ENSGT00940000157152.C	ENSGT00940000156345.g #12	ENSGT00940000165067	ENSGT00940000162095	ENSGT00390000015880 #8	ENSGT00940000158976	ENSGT00940000154006.b	ENSGT00390000018559
Flycatcher	MODERN SPECIES	9	LAT2 (ENSFALG00000023945) #14	RFC2 (ENSFALG00000007144) #15	CLIP2 (ENSFALG00000007137) #17	ENSFALG00000007131	ENSFALG00000029004	ENSFALG00000007130	ENSFALG00000024222	ENSFALG00000007125	ENSFALG00000026907	ENSFALG00000007101	ENSFALG00000007085 #18	ENSFALG00000027939 #21	ENSFALG00000023760	ENSFALG00000026757	ENSFALG00000007044 #20	ENSFALG00000007032 #22	ENSFALG00000007020 #23	AUTS2 (ENSFALG00000013822)	ENSFALG00000024435	ENSFALG00000023601	ENSFALG00000026481	CALN1 (ENSFALG00000013812)	ENSFALG00000013810	SBDS (ENSFALG00000024775)	ENSFALG00000013805	ENSFALG00000013797	ENSFALG00000013778 #12	ENSFALG00000025255 #12	ELN (ENSFALG00000013771) #11	ENSFALG00000028682	METTL27 (ENSFALG00000027469) #9
Passeriformes_g	ANCESTRAL SPECIES	18	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00990000204431	ENSGT00940000163551.c.b	ENSGT00940000163551.c.a	ENSGT00940000164607.c	ENSGT00950000183012.B.a.a	ENSGT00510000048685	ENSGT00390000014737	ENSGT01030000234627.a.a.c.r #7	ENSGT00510000047471	ENSGT00940000159414 #18	ENSGT00940000160349.j #19	ENSGT00940000160349.i #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014.y	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT00960000187204	ENSGT00940000157152.C	ENSGT00940000156345.g #12	ENSGT00940000165067	ENSGT00940000162095	ENSGT00390000015880 #8	ENSGT00940000158976	ENSGT00940000154006.b	ENSGT00390000018559
Passeroidea	ANCESTRAL SPECIES	20	ENSGT00940000155414 #13	ENSGT00390000006821 #14	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000163551.c.a	ENSGT00940000164607.c	ENSGT00950000183012.B.a.a	ENSGT00510000048685	ENSGT00390000014737	ENSGT01030000234627.a.a.c.r #7	ENSGT00510000047471	ENSGT00940000159414 #18	ENSGT00940000160349.j #19	ENSGT00940000160349.i #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014.y
Zebra finch	MODERN SPECIES	10	ENSTGUG00000029539	ENSTGUG00000003539	ENSTGUG00000019664	ENSTGUG00000028031	ENSTGUG00000003529	ENSTGUG00000021376	ENSTGUG00000003523	ENSTGUG00000022907	ENSTGUG00000022209	BUD23 (ENSTGUG00000003541)	ENSTGUG00000003555 #7	MKS1 (ENSTGUG00000003603)	GTF2IRD1 (ENSTGUG00000003638) #18	GTF2I (ENSTGUG00000003714) #19	NCF1 (ENSTGUG00000003753) #20	RCC1L (ENSTGUG00000003787) #22	CASTOR2 (ENSTGUG00000024489) #23	CLIP2 (ENSTGUG00000003825) #17	RFC2 (ENSTGUG00000003875) #15	ENSTGUG00000028930 #14	EIF4H (ENSTGUG00000027757) #13	MYBBP1A (ENSTGUG00000003923)	SPNS2 (ENSTGUG00000003936)	SPNS3 (ENSTGUG00000003953)	UBE2G1 (ENSTGUG00000003974)	ANKFY1 (ENSTGUG00000003986)	CYB5D2 (ENSTGUG00000020351)	ZZEF1 (ENSTGUG00000004023)	ATP2A3 (ENSTGUG00000004042)	P2RX1 (ENSTGUG00000004165)	CAMKK1 (ENSTGUG00000004191)
Common canary	MODERN SPECIES	66													ENSSCAG00000008581 #19	ENSSCAG00000008574 #19	NCF1 (ENSSCAG00000008563) #20	RCC1L (ENSSCAG00000008552) #22	CASTOR2 (ENSSCAG00000008522) #23	ENSSCAG00000008516	AUTS2 (ENSSCAG00000008394)	ENSSCAG00000008341
Medium ground finch	MODERN SPECIES	84					ENSGFOG00000014314	ENSGFOG00000014315	ENSGFOG00000014318	VPS37D (ENSGFOG00000014321)	BUD23 (ENSGFOG00000014322)	STX1A (ENSGFOG00000014329) #7	MKS1 (ENSGFOG00000014337)	GTF2IRD1 (ENSGFOG00000014352) #18	ENSGFOG00000014355 #19	ENSGFOG00000014359	NCF1 (ENSGFOG00000014360) #20	RCC1L (ENSGFOG00000014366) #22	CASTOR2 (ENSGFOG00000014371) #23	AUTS2 (ENSGFOG00000014381)	GALNT17 (ENSGFOG00000014386)	CALN1 (ENSGFOG00000014389)	ENSGFOG00000014392	SBDS (ENSGFOG00000014394)	ENSGFOG00000014396	LIMK1 (ENSGFOG00000014408) #12	ENSGFOG00000014417	ENSGFOG00000014419	CLDN3 (ENSGFOG00000014421)	ABHD11 (ENSGFOG00000014424) #8	MTMR4 (ENSGFOG00000014438)	RNF43 (ENSGFOG00000014471)	SUPT4H1 (ENSGFOG00000014485)
Australian saltwater crocodile	MODERN SPECIES	50	ZZEF1 (ENSCPRG00005006338)	ENSCPRG00005006581	ANKFY1 (ENSCPRG00005006596)	UBE2G1 (ENSCPRG00005006906)	ENSCPRG00005006913	SPNS3 (ENSCPRG00005006920)	SPNS2 (ENSCPRG00005006958)	MYBBP1A (ENSCPRG00005007025)	EIF4H (ENSCPRG00005007039) #13	ENSCPRG00005007042 #14	RFC2 (ENSCPRG00005007048) #15	CLIP2 (ENSCPRG00005007059) #17	GTF2IRD1 (ENSCPRG00005007139) #18	GTF2I (ENSCPRG00005007430) #19	NCF1 (ENSCPRG00005007445) #20	RCC1L (ENSCPRG00005007458) #22	CASTOR2 (ENSCPRG00005007507) #23	AUTS2 (ENSCPRG00005007563)	ENSCPRG00005007761	ENSCPRG00005007772	CALN1 (ENSCPRG00005007782)	ENSCPRG00005007792	SBDS (ENSCPRG00005007811)	ENSCPRG00005007816	MRPS17 (ENSCPRG00005007827)	NIPSNAP2 (ENSCPRG00005007838)	PSPH (ENSCPRG00005007840)	CCT6B (ENSCPRG00005007856)	SUMF2 (ENSCPRG00005007958)	PHKG1 (ENSCPRG00005007968)	CHCHD2 (ENSCPRG00005007979)
Cryptodira	ANCESTRAL SPECIES	18	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00960000192456	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00960000190794	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339	ENSGT00390000008983.b	ENSGT00940000162897	ENSGT00940000158139	ENSGT00440000038159.ic
Testudinoidea	ANCESTRAL SPECIES	15	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00960000192456	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00960000190794	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339	ENSGT00390000008983.b	ENSGT00940000162897	ENSGT00940000158139	ENSGT00440000038159.ic
Testudinidae	ANCESTRAL SPECIES	19	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00960000192456	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130.a	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339	ENSGT00390000008983.b	ENSGT00940000158139	ENSGT00440000038159.ic	ENSGT00530000064242.b
Goode s thornscrub tortoise	MODERN SPECIES	8	P2RX1 (ENSGEVG00005006840)	ATP2A3 (ENSGEVG00005006749)	ZZEF1 (ENSGEVG00005006656)	CYB5D2 (ENSGEVG00005006607)	ANKFY1 (ENSGEVG00005006561)	UBE2G1 (ENSGEVG00005006533)	SPNS3 (ENSGEVG00005006089)	SPNS2 (ENSGEVG00005005938)	MYBBP1A (ENSGEVG00005005892)	EIF4H (ENSGEVG00005005856) #13	RFC2 (ENSGEVG00005005823) #15	CLIP2 (ENSGEVG00005005490) #17	GTF2IRD1 (ENSGEVG00005005283) #18	GTF2I (ENSGEVG00005005035) #19	NCF1 (ENSGEVG00005004967) #20	RCC1L (ENSGEVG00005004937) #22	CASTOR2 (ENSGEVG00005004916) #23	AUTS2 (ENSGEVG00005004847)	GALNT17 (ENSGEVG00005004728)	CALN1 (ENSGEVG00005004704)	ENSGEVG00005004633	SBDS (ENSGEVG00005004586)	ENSGEVG00005004500	MRPS17 (ENSGEVG00005004459)	NIPSNAP2 (ENSGEVG00005004426)	PSPH (ENSGEVG00005004401)	CCT6B (ENSGEVG00005004341)	ENSGEVG00005004311	PHKG1 (ENSGEVG00005004274)	ENSGEVG00005004242	ENSGEVG00005020369
Abingdon island giant tortoise	MODERN SPECIES	1196	ATP2A3 (ENSCABG00000011237)	ZZEF1 (ENSCABG00000010918)	CYB5D2 (ENSCABG00000010913)	ANKFY1 (ENSCABG00000010754)	UBE2G1 (ENSCABG00000010751)	ENSCABG00000010750	SPNS3 (ENSCABG00000010747)	SPNS2 (ENSCABG00000010740)	MYBBP1A (ENSCABG00000010735)	EIF4H (ENSCABG00000010732) #13	RFC2 (ENSCABG00000010730) #15	CLIP2 (ENSCABG00000010713) #17	GTF2IRD1 (ENSCABG00000010700) #18	GTF2I (ENSCABG00000007886) #19	NCF1 (ENSCABG00000007863) #20	RCC1L (ENSCABG00000007854) #22	CASTOR2 (ENSCABG00000007836) #23
Emydidae	ANCESTRAL SPECIES	16	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00960000190794	ENSGT00550000075050 #15	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00390000003115	ENSGT00940000156339	ENSGT00940000162897	ENSGT00940000158139	ENSGT00440000038159.ic	ENSGT00960000192991
painted turtle	MODERN SPECIES	15	ATP2A3 (ENSCPBG00000027736)	ZZEF1 (ENSCPBG00000027734)	CYB5D2 (ENSCPBG00000027728)	ANKFY1 (ENSCPBG00000027722)	UBE2G1 (ENSCPBG00000027717)	SPNS3 (ENSCPBG00000027711)	SPNS2 (ENSCPBG00000027707)	MYBBP1A (ENSCPBG00000027701)	EIF4H (ENSCPBG00000027695) #13	ENSCPBG00000027693	RFC2 (ENSCPBG00000027690) #15	CLIP2 (ENSCPBG00000027685) #17	GTF2IRD1 (ENSCPBG00000027670) #18	GTF2I (ENSCPBG00000027663) #19	NCF1 (ENSCPBG00000027660) #20	RCC1L (ENSCPBG00000027659) #22	CASTOR2 (ENSCPBG00000027656) #23	ENSCPBG00000027651	ENSCPBG00000027650	PCDH18 (ENSCPBG00000027647)	SLC7A11 (ENSCPBG00000027632)	NOCT (ENSCPBG00000027624)	ELF2 (ENSCPBG00000027621)	ENSCPBG00000027620	ENSCPBG00000027617	NAA15 (ENSCPBG00000027608)	RAB33B (ENSCPBG00000027605)	ENSCPBG00000027603	ENSCPBG00000027600	ENSCPBG00000027597	MGST2 (ENSCPBG00000027595)
Three-toed box turtle	MODERN SPECIES	106	ATP2A3 (ENSTMTG00000004912)	ENSTMTG00000004964	ZZEF1 (ENSTMTG00000005161)	CYB5D2 (ENSTMTG00000007176)	ANKFY1 (ENSTMTG00000007222)	UBE2G1 (ENSTMTG00000007578)	SPNS3 (ENSTMTG00000007607)	SPNS2 (ENSTMTG00000007788)	MYBBP1A (ENSTMTG00000007826)	EIF4H (ENSTMTG00000007872) #13	RFC2 (ENSTMTG00000007891) #15	CLIP2 (ENSTMTG00000007907) #17	GTF2IRD1 (ENSTMTG00000007930) #18	GTF2I (ENSTMTG00000008408) #19	NCF1 (ENSTMTG00000015008) #20	RCC1L (ENSTMTG00000015062) #22	CASTOR2 (ENSTMTG00000015307) #23	AUTS2 (ENSTMTG00000015376)	GALNT17 (ENSTMTG00000016115)	CALN1 (ENSTMTG00000016176)	ENSTMTG00000016225	SBDS (ENSTMTG00000016316)	ENSTMTG00000016363	MRPS17 (ENSTMTG00000016658)	NIPSNAP2 (ENSTMTG00000016668)	PSPH (ENSTMTG00000016688)	CCT6B (ENSTMTG00000016704)	SUMF2 (ENSTMTG00000016737)	PHKG1 (ENSTMTG00000016750)	CHCHD2 (ENSTMTG00000016770)	ENSTMTG00000016777
Chinese turtle	MODERN SPECIES	2098	ATP2A3 (ENSPSIG00000016156)	ZZEF1 (ENSPSIG00000016080)	CYB5D2 (ENSPSIG00000016065)	ANKFY1 (ENSPSIG00000015710)	UBE2G1 (ENSPSIG00000015362)	SPNS3 (ENSPSIG00000015185)	ENSPSIG00000001465	MYBBP1A (ENSPSIG00000015145)	SPNS2 (ENSPSIG00000014588)	EIF4H (ENSPSIG00000014490) #13	CLIP2 (ENSPSIG00000013625) #17	RFC2 (ENSPSIG00000013050) #15	GTF2IRD1 (ENSPSIG00000012562) #18	GTF2I (ENSPSIG00000011811) #19	NCF1 (ENSPSIG00000011607) #20	RCC1L (ENSPSIG00000011313) #22	CASTOR2 (ENSPSIG00000011045) #23	AUTS2 (ENSPSIG00000010845)	GALNT17 (ENSPSIG00000010831)
Anura	ANCESTRAL SPECIES	23	ENSGT01020000230351.C	ENSGT00940000155668	ENSGT00940000155045	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.b	ENSGT00390000017457	ENSGT00940000155414 #13	ENSGT00550000075050 #15	ENSGT00940000161621.A.a.b.a.m	ENSGT00940000159426 #17	ENSGT00940000159414 #18	ENSGT00940000160349 #19	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000176149	ENSGT00940000154823	ENSGT00940000156014	ENSGT00940000159212.a	ENSGT00510000047059	ENSGT00390000008135	ENSGT01020000230354.B.b.a.a	ENSGT00530000064130	ENSGT00950000183018.a.d	ENSGT00940000156339	ENSGT00390000003115	ENSGT00940000162897	ENSGT00940000158139	ENSGT00440000038159
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000020336	ENSLLEG00000020367	SPNS2 (ENSLLEG00000020408)	ENSLLEG00000020670	ENSLLEG00000021190	EIF4H (ENSLLEG00000021248) #13	ENSLLEG00000021512	RFC2 (ENSLLEG00000021605) #15	ENSLLEG00000022266	CLIP2 (ENSLLEG00000022336) #17	GTF2IRD1 (ENSLLEG00000022903) #18	ENSLLEG00000024294	GTF2I (ENSLLEG00000024352) #19	ENSLLEG00000000484	NCF1 (ENSLLEG00000000499) #20	RCC1L (ENSLLEG00000000519) #22	CASTOR2 (ENSLLEG00000000547) #23	ENSLLEG00000000572	ENSLLEG00000000596	ENSLLEG00000000705	ENSLLEG00000000741	C11orf54 (ENSLLEG00000000752)	TBX4 (ENSLLEG00000000863)	ENSLLEG00000000955	ENSLLEG00000000989	ENSLLEG00000001065	ENSLLEG00000001072	ENSLLEG00000001079	ENSLLEG00000001084	ENSLLEG00000001091	ENSLLEG00000001098
Frog	MODERN SPECIES	2	sh2d1b (ENSXETG00000045754)	cip2a (ENSXETG00000016139)	myh15 (ENSXETG00000016136)	ift57 (ENSXETG00000026185)	hhla2 (ENSXETG00000016135)	bbx (ENSXETG00000016131)	cblb (ENSXETG00000016127)	alcam (ENSXETG00000016124)	ENSXETG00000038473	zpld1 (ENSXETG00000006999)	ENSXETG00000048847	XB5965586 [provisional:nfkbiz] (ENSXETG00000032514)	nxpe3 (ENSXETG00000006995)	rpl24 (ENSXETG00000008052)	cep97 (ENSXETG00000009170)	rcc1l (ENSXETG00000009171) #22	dhx33 (ENSXETG00000009173)	derl2 (ENSXETG00000009183)	mis12 (ENSXETG00000009185)	ENSXETG00000041632	camkk1 (ENSXETG00000033917)	p2rx1 (ENSXETG00000032959)	atp2a3 (ENSXETG00000031538)	zzef1 (ENSXETG00000029987)	cyb5d2 (ENSXETG00000018225)	ankfy1 (ENSXETG00000030210)	ENSXETG00000048164	ube2g1 (ENSXETG00000026172)	spns2 (ENSXETG00000033228)	mybbp1a (ENSXETG00000035249)	eif4h (ENSXETG00000018230) #13
Coelacanth	MODERN SPECIES	250	NUP88 (ENSLACG00000018231)	RPAIN (ENSLACG00000018226)	C1QBP (ENSLACG00000018219)	MIS12 (ENSLACG00000018211)	IFT22 (ENSLACG00000018212)	DERL2 (ENSLACG00000018200)	DHX33 (ENSLACG00000018174)	ENSLACG00000018066	ENSLACG00000018060	ENSLACG00000018018	CUX1 (ENSLACG00000017710)	SH2B2 (ENSLACG00000017508)	PRKRIP1 (ENSLACG00000017486)	ENSLACG00000017371	NCF1 (ENSLACG00000017263) #20	RCC1L (ENSLACG00000017163) #22	ENSLACG00000016662	C11orf54 (ENSLACG00000016618)	ENSLACG00000015831	ENSLACG00000014091	ENSLACG00000012524	AUTS2 (ENSLACG00000007721)	GALNT17 (ENSLACG00000003791)	ENSLACG00000001761
Actinopterygii	ANCESTRAL SPECIES	686															ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23
Neopterygii	ANCESTRAL SPECIES	64	ENSGT00940000164883	ENSGT00390000016686	ENSGT00940000154849.a	ENSGT01060000250264	ENSGT00940000160764	ENSGT00940000155206	ENSGT01100000264661	ENSGT00950000184414	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000173997	ENSGT00940000153883.b	ENSGT00940000159095	ENSGT00940000158605	ENSGT00940000156492	ENSGT00940000158479
Osteoglossocephalai	ANCESTRAL SPECIES	7	ENSGT00940000156805	ENSGT00390000015123	ENSGT00390000009588	ENSGT00390000016686	ENSGT00940000154849.a	ENSGT01060000249314	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160149	ENSGT00940000153392.b.b	ENSGT00390000005003	ENSGT00950000183012.B.a	ENSGT00390000015063	ENSGT00530000063743.b
Clupeocephala	ANCESTRAL SPECIES	10														ENSGT00550000074975	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000173997	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160149	ENSGT00940000153392.b.b	ENSGT00390000005003	ENSGT00950000183012.B.a	ENSGT00390000015063
Euteleosteomorpha	ANCESTRAL SPECIES	300															ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000173997	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160149
Acanthomorphata	ANCESTRAL SPECIES	14	ENSGT00390000015655.a.m.b	ENSGT00940000159782.b	ENSGT00940000155677.b	ENSGT01030000234886.e.b	ENSGT00820000127055.a.b	ENSGT00940000154495.a.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000155545.b	ENSGT00950000183155.a.a.a.b	ENSGT00530000063405.b.f	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000157126.f	ENSGT00390000009255	ENSGT00940000164937.a.b	ENSGT00940000156649.c.b	ENSGT00950000183181.B.b.l.a	ENSGT01030000234517.F	ENSGT00940000159359
Euacanthomorphacea	ANCESTRAL SPECIES	19	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000157126.f	ENSGT00390000009255	ENSGT00940000164937.a.b	ENSGT00940000156649.c.b	ENSGT00950000183181.B.b.l.a	ENSGT00940000177367
Percomorphaceae	ANCESTRAL SPECIES	40	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	509	pdlim4 (ENSHCOG00000006944)	PITPNA (ENSHCOG00000006966)	INPP5K (ENSHCOG00000006985)	nle1 (ENSHCOG00000007051)	ENSHCOG00000007060	slc25a1a (ENSHCOG00000007081)	ENSHCOG00000007089	ENSHCOG00000007103	tmigd1 (ENSHCOG00000007113)	ENSHCOG00000007119	cct8 (ENSHCOG00000007145)	ENSHCOG00000007169	aldocb (ENSHCOG00000000228)	pigs (ENSHCOG00000007184)	tlcd5b (ENSHCOG00000007207)	rcc1l (ENSHCOG00000000236) #22	rcc1l (ENSHCOG00000007308) #22	pou2f3 (ENSHCOG00000000241)
Tiger tail seahorse	MODERN SPECIES	509	PITPNA (ENSHCOG00000006966)	INPP5K (ENSHCOG00000006985)	nle1 (ENSHCOG00000007051)	ENSHCOG00000007060	slc25a1a (ENSHCOG00000007081)	ENSHCOG00000007089	ENSHCOG00000007103	tmigd1 (ENSHCOG00000007113)	ENSHCOG00000007119	cct8 (ENSHCOG00000007145)	ENSHCOG00000007169	aldocb (ENSHCOG00000000228)	pigs (ENSHCOG00000007184)	tlcd5b (ENSHCOG00000007207)	rcc1l (ENSHCOG00000000236) #22	rcc1l (ENSHCOG00000007308) #22	pou2f3 (ENSHCOG00000000241)
Percomorphaceae_B	ANCESTRAL SPECIES	10	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Ovalentaria	ANCESTRAL SPECIES	11	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Atherinomorphae	ANCESTRAL SPECIES	14	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Cyprinodontiformes	ANCESTRAL SPECIES	11	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Aplocheiloidei	ANCESTRAL SPECIES	59	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106
Mangrove rivulus	MODERN SPECIES	120			ENSKMAG00000012202	ENSKMAG00000012216	ENSKMAG00000012258	FCHSD2 (ENSKMAG00000012329)	foxred1 (ENSKMAG00000012368)	kcnj1b (ENSKMAG00000012425)	ENSKMAG00000012436	rabep1 (ENSKMAG00000012471)	mpzl1l (ENSKMAG00000012544)	ENSKMAG00000012560	emsy (ENSKMAG00000012608)	ENSKMAG00000012690	tlcd5b (ENSKMAG00000012722)	rcc1l (ENSKMAG00000012743) #22	castor2 (ENSKMAG00000012826) #23	DOC2B (ENSKMAG00000012901)	tmem248 (ENSKMAG00000012967)	lig3 (ENSKMAG00000013023)	rad51d (ENSKMAG00000013105)	tmem132e (ENSKMAG00000013144)	dtx2 (ENSKMAG00000013203)	GTF2IRD1 (ENSKMAG00000013231) #18	CLIP2 (ENSKMAG00000013315) #17	cldn2 (ENSKMAG00000013422)	rbm41 (ENSKMAG00000013436)	klf8 (ENSKMAG00000013464)	klf5l (ENSKMAG00000013486)	pou4f4 (ENSKMAG00000013506)	ncf1 (ENSKMAG00000013526) #20
Turquoise killifish	MODERN SPECIES	1620	ENSNFUG00015005420	ENSNFUG00015005411	ENSNFUG00015005384	FCHSD2 (ENSNFUG00015005345)	FOXRED1 (ENSNFUG00015005086)	kcnj1b (ENSNFUG00015005034)	ENSNFUG00015005030	RABEP1 (ENSNFUG00015004848)	ENSNFUG00015022801	MPZL1L (ENSNFUG00015022796)	LRRC32 (ENSNFUG00015022791)	ENSNFUG00015022790	C10H11ORF30 (ENSNFUG00015022778)	ARHGEF12B (ENSNFUG00015022760)	TMEM136 (ENSNFUG00015022755)	rcc1l (ENSNFUG00015022719) #22	GATSL2 (ENSNFUG00015022707) #23	ENSNFUG00015022703	DOC2B (ENSNFUG00015022698)	TMEM248 (ENSNFUG00015022695)	LIG3 (ENSNFUG00015022579)	rad51d (ENSNFUG00015022543)	ENSNFUG00015022540	TMEM132E (ENSNFUG00015022531)	ENSNFUG00015022524	ENSNFUG00015022521	DTX2 (ENSNFUG00015022513)	GTF2I (ENSNFUG00015022498) #18	CLIP2 (ENSNFUG00015021996) #17	cldn2 (ENSNFUG00015021943)	ENSNFUG00015021940
Cyprinodontoidei	ANCESTRAL SPECIES	5	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Poeciliinae	ANCESTRAL SPECIES	26	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.b	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000178148	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Poecilia	ANCESTRAL SPECIES	42	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.b	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000178148	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
NAME_6	ANCESTRAL SPECIES	44	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.a.b	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000178148	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Sailfin molly	MODERN SPECIES	1028						foxred1 (ENSPLAG00000012019)	kcnj1b (ENSPLAG00000012043)	ENSPLAG00000012053	rabep1 (ENSPLAG00000012130)	mpzl1l (ENSPLAG00000012185)	ENSPLAG00000012198	emsy (ENSPLAG00000012278)	ENSPLAG00000012542	tlcd5b (ENSPLAG00000012571)	ENSPLAG00000012583	rcc1l (ENSPLAG00000012625) #22
Amazon molly	MODERN SPECIES	402										rabep1 (ENSPFOG00000003835)	mpzl1l (ENSPFOG00000003741)	ENSPFOG00000003717	emsy (ENSPFOG00000003557)	ENSPFOG00000003224	tlcd5b (ENSPFOG00000003202)	rcc1l (ENSPFOG00000003043) #22	castor2 (ENSPFOG00000002821) #23	ENSPFOG00000023519	DOC2B (ENSPFOG00000002635)	tmem248 (ENSPFOG00000002569)	lig3 (ENSPFOG00000002118)	rad51d (ENSPFOG00000001907)	tmem132e (ENSPFOG00000001690)	dtx2 (ENSPFOG00000001494)	GTF2IRD1 (ENSPFOG00000001233) #18	CLIP2 (ENSPFOG00000000967) #17	cldn2 (ENSPFOG00000020532)	rbm41 (ENSPFOG00000000848)	klf8 (ENSPFOG00000000812)	klf5l (ENSPFOG00000000768)	pou4f4 (ENSPFOG00000000745)
Guppy	MODERN SPECIES	444	MYO7A (ENSPREG00000014771)	GDPD4 (ENSPREG00000014734)	ENSPREG00000014730	ENSPREG00000014700	FCHSD2 (ENSPREG00000014659)	foxred1 (ENSPREG00000014645)	kcnj1b (ENSPREG00000014638)	ENSPREG00000014624	rabep1 (ENSPREG00000014547)	mpzl1l (ENSPREG00000014512)	ENSPREG00000014506	emsy (ENSPREG00000014428)	ENSPREG00000014395	tlcd5b (ENSPREG00000014386)	ENSPREG00000014384	rcc1l (ENSPREG00000014358) #22	castor2 (ENSPREG00000014328) #23	DOC2B (ENSPREG00000014289)	tmem248 (ENSPREG00000014167)	lig3 (ENSPREG00000014115)	rad51d (ENSPREG00000014098)	tmem132e (ENSPREG00000014015)	dtx2 (ENSPREG00000013944)	GTF2IRD1 (ENSPREG00000013881) #18	CLIP2 (ENSPREG00000013806) #17	cldn2 (ENSPREG00000013785)	rbm41 (ENSPREG00000013759)	klf8 (ENSPREG00000013729)	klf5l (ENSPREG00000013698)	pou4f4 (ENSPREG00000013684)	SPRY3 (ENSPREG00000013673)
Platyfish	MODERN SPECIES	2	AQP11 (ENSXMAG00000000651)	ENSXMAG00000027612	ENSXMAG00000028499	FCHSD2 (ENSXMAG00000011270)	foxred1 (ENSXMAG00000011302)	kcnj1b (ENSXMAG00000011316)	ENSXMAG00000011318	rabep1 (ENSXMAG00000011320)	mpzl1l (ENSXMAG00000011358)	ENSXMAG00000028354	emsy (ENSXMAG00000011362)	ENSXMAG00000011381	ENSXMAG00000021745	tlcd5b (ENSXMAG00000023906)	ENSXMAG00000025697	rcc1l (ENSXMAG00000011400) #22	castor2 (ENSXMAG00000028971) #23	DOC2B (ENSXMAG00000026280)	tmem248 (ENSXMAG00000025382)	lig3 (ENSXMAG00000011457)	rad51d (ENSXMAG00000011477)	ENSXMAG00000027783	tmem132e (ENSXMAG00000028869)	dtx2 (ENSXMAG00000015255)	GTF2IRD1 (ENSXMAG00000015294) #18	CLIP2 (ENSXMAG00000015329) #17	cldn2 (ENSXMAG00000024391)	rbm41 (ENSXMAG00000015338)	klf8 (ENSXMAG00000007445)	klf5l (ENSXMAG00000027454)	pou4f4 (ENSXMAG00000015351)
NAME_4	ANCESTRAL SPECIES	117	ENSGT00940000156251.b	ENSGT00940000157247.b	ENSGT00940000166878	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Sheepshead minnow	MODERN SPECIES	362														MGAT5B (ENSCVAG00000005190)	DDX39A (ENSCVAG00000005146)	rcc1l (ENSCVAG00000005022) #22	castor2 (ENSCVAG00000004997) #23	DOC2B (ENSCVAG00000004973)	tmem248 (ENSCVAG00000004941)	lig3 (ENSCVAG00000004924)	rad51d (ENSCVAG00000004865)	tmem132e (ENSCVAG00000004862)
Mummichog	MODERN SPECIES	279						FCHSD2 (ENSFHEG00000022423)	foxred1 (ENSFHEG00000022552)	kcnj1b (ENSFHEG00000022584)	ENSFHEG00000022606	rabep1 (ENSFHEG00000022679)	mpzl1l (ENSFHEG00000022691)	ENSFHEG00000022703	emsy (ENSFHEG00000022711)	ENSFHEG00000022749	tlcd5b (ENSFHEG00000022764)	rcc1l (ENSFHEG00000022794) #22	castor2 (ENSFHEG00000022870) #23	DOC2B (ENSFHEG00000022913)
Oryzias	ANCESTRAL SPECIES	14	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Oryzias_a	ANCESTRAL SPECIES	2	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114.e	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Chinese medaka	MODERN SPECIES	609													ENSOSIG00000017378	emsy (ENSOSIG00000017380)	tlcd5b (ENSOSIG00000017502)	rcc1l (ENSOSIG00000017516) #22	ENSOSIG00000017559 #23	DOC2B (ENSOSIG00000017561)	tmem248 (ENSOSIG00000017567)	lig3 (ENSOSIG00000017591)	rad51d (ENSOSIG00000017699)	ENSOSIG00000017700	tmem132e (ENSOSIG00000017703)	ENSOSIG00000017707	dtx2 (ENSOSIG00000017710)	GTF2IRD1 (ENSOSIG00000017715) #18	CLIP2 (ENSOSIG00000017721) #17	cldn2 (ENSOSIG00000017722)	klf8 (ENSOSIG00000017729)	klf5l (ENSOSIG00000017732)	pou4f4 (ENSOSIG00000017733)
Japanese Medaka HdrR	MODERN SPECIES	5	ompb (ENSORLG00000014978)	ENSORLG00000015036	ENSORLG00000021923	ENSORLG00000015053	ENSORLG00000028843	ENSORLG00000028737	foxred1 (ENSORLG00000015079)	kcnj1b (ENSORLG00000015086)	ENSORLG00000029829	rabep1 (ENSORLG00000015131)	mpzl1l (ENSORLG00000023228)	ENSORLG00000023939	emsy (ENSORLG00000023771)	ENSORLG00000022756	ENSORLG00000025239	rcc1l (ENSORLG00000015158) #22	castor2 (ENSORLG00000015182) #23	DOC2B (ENSORLG00000015189)	tmem248 (ENSORLG00000015203)	lig3 (ENSORLG00000015208)	rad51d (ENSORLG00000015239)	tmem132e (ENSORLG00000015249)	dtx2 (ENSORLG00000015263)	GTF2IRD1 (ENSORLG00000015316) #18	CLIP2 (ENSORLG00000015350) #17	cldn2 (ENSORLG00000015354)	rbm41 (ENSORLG00000015367)	klf8 (ENSORLG00000015374)	klf5l (ENSORLG00000015385)	pou4f4 (ENSORLG00000015392)	ENSORLG00000027499
Oryzias_b	ANCESTRAL SPECIES	53	ENSGT00940000156492	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23
Indian medaka	MODERN SPECIES	4	gria1b (ENSOMEG00000001682)	nipal4 (ENSOMEG00000001642)	ins (ENSOMEG00000001632)	acat1 (ENSOMEG00000001631)	ENSOMEG00000001625	MMP1 (ENSOMEG00000001620)	acer3 (ENSOMEG00000001601)	ENSOMEG00000001590	ENSOMEG00000001586	ENSOMEG00000001577	zgc:123105 (ENSOMEG00000001569)	ENSOMEG00000001563	SPRY3 (ENSOMEG00000001555)	pou4f4 (ENSOMEG00000001549)	tlcd5b (ENSOMEG00000001543)	rcc1l (ENSOMEG00000001534) #22	castor2 (ENSOMEG00000001525) #23	DOC2B (ENSOMEG00000001517)	tmem248 (ENSOMEG00000001506)	lig3 (ENSOMEG00000001498)	rad51d (ENSOMEG00000001490)	tmem132e (ENSOMEG00000001482)	ENSOMEG00000001477	dtx2 (ENSOMEG00000001472)	GTF2IRD1 (ENSOMEG00000023836) #18	CLIP2 (ENSOMEG00000023831) #17	cldn2 (ENSOMEG00000023822)	rbm41 (ENSOMEG00000023816)	klf8 (ENSOMEG00000023806)	klf5l (ENSOMEG00000023803)	ENSOMEG00000023800
Javanese ricefish	MODERN SPECIES	5	ENSOJAG00000019559	ENSOJAG00000019594	ENSOJAG00000019602	ENSOJAG00000019613	AQP11 (ENSOJAG00000019634)	FCHSD2 (ENSOJAG00000019670)	foxred1 (ENSOJAG00000019696)	kcnj1b (ENSOJAG00000019720)	ENSOJAG00000019733	rabep1 (ENSOJAG00000019803)	mpzl1l (ENSOJAG00000020322)	ENSOJAG00000020336	emsy (ENSOJAG00000020358)	ENSOJAG00000020578	tlcd5b (ENSOJAG00000020586)	rcc1l (ENSOJAG00000020598) #22	DOC2B (ENSOJAG00000020663)	CAPN5 (ENSOJAG00000020775)	ompb (ENSOJAG00000020893)	slc35f2 (ENSOJAG00000001681)	elmod1 (ENSOJAG00000001746)	gria4b (ENSOJAG00000001902)	ywhae2 (ENSOJAG00000002299)	CRK (ENSOJAG00000002345)	ENSOJAG00000002357	ENSOJAG00000002367	ENSOJAG00000002376	TECTA (ENSOJAG00000002408)	plekhb1 (ENSOJAG00000002508)	TBCEL (ENSOJAG00000002530)	sc5d (ENSOJAG00000002565)
Ovalentaria_B	ANCESTRAL SPECIES	16	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Cichlidae	ANCESTRAL SPECIES	4	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	14	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	22	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Haplochromini	ANCESTRAL SPECIES	8	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Burton s mouthbrooder	MODERN SPECIES	282	CAPN5 (ENSHBUG00000013069)	MYO7A (ENSHBUG00000013188)	GDPD4 (ENSHBUG00000013213)	ENSHBUG00000013243	ENSHBUG00000013341	FCHSD2 (ENSHBUG00000013486)	foxred1 (ENSHBUG00000013505)	kcnj1b (ENSHBUG00000013510)	ENSHBUG00000013532	rabep1 (ENSHBUG00000013663)	mpzl1l (ENSHBUG00000013690)	ENSHBUG00000013703	emsy (ENSHBUG00000013803)	ENSHBUG00000013827	tlcd5b (ENSHBUG00000013844)	rcc1l (ENSHBUG00000013891) #22	castor2 (ENSHBUG00000013944) #23	DOC2B (ENSHBUG00000013991)	tmem248 (ENSHBUG00000014025)	lig3 (ENSHBUG00000014105)	rad51d (ENSHBUG00000014121)	tmem132e (ENSHBUG00000014138)	dtx2 (ENSHBUG00000014152)	GTF2IRD1 (ENSHBUG00000014185) #18	CLIP2 (ENSHBUG00000014278) #17	cldn2 (ENSHBUG00000014300)	rbm41 (ENSHBUG00000014307)	klf8 (ENSHBUG00000014321)	klf5l (ENSHBUG00000014349)	pou4f4 (ENSHBUG00000014363)	SPRY3 (ENSHBUG00000014371)
Haplochromini_A	ANCESTRAL SPECIES	6	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Haplochromini_B	ANCESTRAL SPECIES	16	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Eastern happy	MODERN SPECIES	1	ENSACLG00000023038	MYO7A (ENSACLG00000023046)	ENSACLG00000023124	ENSACLG00000023144	ENSACLG00000023168	FCHSD2 (ENSACLG00000023201)	foxred1 (ENSACLG00000023282)	kcnj1b (ENSACLG00000023295)	ENSACLG00000023304	rabep1 (ENSACLG00000023321)	mpzl1l (ENSACLG00000023426)	ENSACLG00000023438	emsy (ENSACLG00000023444)	ENSACLG00000023550	tlcd5b (ENSACLG00000023621)	rcc1l (ENSACLG00000023656) #22	castor2 (ENSACLG00000023707) #23	DOC2B (ENSACLG00000023750)	ENSACLG00000023794	ENSACLG00000023808	tmem248 (ENSACLG00000023838)	lig3 (ENSACLG00000023859)	rad51d (ENSACLG00000023916)	tmem132e (ENSACLG00000023926)	dtx2 (ENSACLG00000023976)	ENSACLG00000023983 #18	CLIP2 (ENSACLG00000024018) #17	cldn2 (ENSACLG00000024120)	rbm41 (ENSACLG00000024125)	klf8 (ENSACLG00000024350)	klf5l (ENSACLG00000024368)
Zebra mbuna	MODERN SPECIES	1092	ompb (ENSMZEG00005010970)	MYO7A (ENSMZEG00005011034)	ENSMZEG00005011111	ENSMZEG00005011123	ENSMZEG00005011134	FCHSD2 (ENSMZEG00005011163)	foxred1 (ENSMZEG00005011217)	kcnj1b (ENSMZEG00005011231)	ENSMZEG00005011235	rabep1 (ENSMZEG00005011268)	mpzl1l (ENSMZEG00005011307)	ENSMZEG00005011320	emsy (ENSMZEG00005011328)	ENSMZEG00005011352	tlcd5b (ENSMZEG00005011365)	rcc1l (ENSMZEG00005011370) #22	castor2 (ENSMZEG00005011388) #23	DOC2B (ENSMZEG00005011406)	tmem248 (ENSMZEG00005011420)	lig3 (ENSMZEG00005011453)	rad51d (ENSMZEG00005011513)	tmem132e (ENSMZEG00005011524)	dtx2 (ENSMZEG00005011536)	GTF2IRD1 (ENSMZEG00005011583) #18	CLIP2 (ENSMZEG00005011621) #17	cldn2 (ENSMZEG00005011668)	rbm41 (ENSMZEG00005011676)	klf8 (ENSMZEG00005011709)	klf5l (ENSMZEG00005011722)	pou4f4 (ENSMZEG00005011730)	SPRY3 (ENSMZEG00005011737)
P. nyererei	MODERN SPECIES	310	ENSPNYG00000011495	ENSPNYG00000011524	ENSPNYG00000011536	FCHSD2 (ENSPNYG00000011552)	ENSPNYG00000011581	foxred1 (ENSPNYG00000011608)	kcnj1b (ENSPNYG00000011686)	ENSPNYG00000011703	rabep1 (ENSPNYG00000011756)	ENSPNYG00000011844	mpzl1l (ENSPNYG00000011860)	ENSPNYG00000011873	emsy (ENSPNYG00000011893)	ENSPNYG00000011983	tlcd5b (ENSPNYG00000012027)	rcc1l (ENSPNYG00000012045) #22	castor2 (ENSPNYG00000012091) #23	DOC2B (ENSPNYG00000012141)	tmem248 (ENSPNYG00000012181)	lig3 (ENSPNYG00000012229)	rad51d (ENSPNYG00000012287)	tmem132e (ENSPNYG00000012354)	ENSPNYG00000012399	dtx2 (ENSPNYG00000012412)	GTF2IRD1 (ENSPNYG00000012449) #18	CLIP2 (ENSPNYG00000012544) #17	cldn2 (ENSPNYG00000012668)	rbm41 (ENSPNYG00000012687)	klf8 (ENSPNYG00000012735)	klf5l (ENSPNYG00000012756)	pou4f4 (ENSPNYG00000012775)
Lyretail cichlid	MODERN SPECIES	297	ompb (ENSNBRG00000013376)	MYO7A (ENSNBRG00000013391)	ENSNBRG00000013486	ENSNBRG00000013531	ENSNBRG00000013541	FCHSD2 (ENSNBRG00000013569)	ENSNBRG00000013607	foxred1 (ENSNBRG00000013634)	kcnj1b (ENSNBRG00000013734)	rabep1 (ENSNBRG00000013749)	mpzl1l (ENSNBRG00000013802)	ENSNBRG00000013811	emsy (ENSNBRG00000013848)	ENSNBRG00000013965	tlcd5b (ENSNBRG00000014071)	rcc1l (ENSNBRG00000014086) #22	castor2 (ENSNBRG00000014104) #23	DOC2B (ENSNBRG00000014131)	tmem248 (ENSNBRG00000014163)	lig3 (ENSNBRG00000014195)	rad51d (ENSNBRG00000014252)	tmem132e (ENSNBRG00000014305)	dtx2 (ENSNBRG00000014339)	GTF2IRD1 (ENSNBRG00000014348) #18	CLIP2 (ENSNBRG00000014415) #17	ENSNBRG00000014454	rbm41 (ENSNBRG00000014480)	klf8 (ENSNBRG00000014536)	klf5l (ENSNBRG00000014543)	pou4f4 (ENSNBRG00000014563)	SPRY3 (ENSNBRG00000014574)
Nile tilapia	MODERN SPECIES	1	ENSONIG00000009570	AQP11 (ENSONIG00000009574)	ENSONIG00000009575	ENSONIG00000032351	ENSONIG00000038404	FCHSD2 (ENSONIG00000013349)	foxred1 (ENSONIG00000013346)	kcnj1b (ENSONIG00000013345)	ENSONIG00000013344	rabep1 (ENSONIG00000013337)	mpzl1l (ENSONIG00000013334)	ENSONIG00000013333	emsy (ENSONIG00000013319)	ENSONIG00000013306	tlcd5b (ENSONIG00000013304)	rcc1l (ENSONIG00000013300) #22	castor2 (ENSONIG00000013294) #23	DOC2B (ENSONIG00000030282)	tmem248 (ENSONIG00000013291)	lig3 (ENSONIG00000013282)	rad51d (ENSONIG00000013277)	ENSONIG00000035009	tmem132e (ENSONIG00000013275)	dtx2 (ENSONIG00000013272)	GTF2IRD1 (ENSONIG00000013267) #18	CLIP2 (ENSONIG00000013264) #17	cldn2 (ENSONIG00000040412)	rbm41 (ENSONIG00000013260)	klf8 (ENSONIG00000013257)	klf5l (ENSONIG00000013256)	pou4f4 (ENSONIG00000041937)
Midas cichlid	MODERN SPECIES	344	MYO7A (ENSACIG00000013121)	ENSACIG00000013215	AQP11 (ENSACIG00000013247)	ENSACIG00000013262	FCHSD2 (ENSACIG00000013308)	ENSACIG00000013347	foxred1 (ENSACIG00000013363)	kcnj1b (ENSACIG00000013421)	ENSACIG00000013430	rabep1 (ENSACIG00000013444)	mpzl1l (ENSACIG00000013477)	ENSACIG00000013488	emsy (ENSACIG00000013498)	ENSACIG00000013556	tlcd5b (ENSACIG00000013657)	rcc1l (ENSACIG00000013668) #22	castor2 (ENSACIG00000013695) #23	DOC2B (ENSACIG00000013720)	tmem248 (ENSACIG00000013751)	lig3 (ENSACIG00000013767)	rad51d (ENSACIG00000013804)	tmem132e (ENSACIG00000013851)	dtx2 (ENSACIG00000013875)	GTF2IRD1 (ENSACIG00000013926) #18	CLIP2 (ENSACIG00000013975) #17	cldn2 (ENSACIG00000014016)	ENSACIG00000014024	rbm41 (ENSACIG00000014038)	klf8 (ENSACIG00000014078)	klf5l (ENSACIG00000014095)	pou4f4 (ENSACIG00000014137)
Pomacentridae	ANCESTRAL SPECIES	57	ENSGT00940000163875.a.b.b	ENSGT01030000234556.a.b.a	ENSGT00530000063743.b	ENSGT00950000183012.B.a	ENSGT00990000203615.b.b.a	ENSGT00390000006114	ENSGT00510000046732.A.c	ENSGT00530000064411.b	ENSGT00530000063816.c.a	ENSGT00940000156251.b	ENSGT00940000155350.h	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000156648.d	ENSGT00390000015655.a.m.b	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00940000155772.a.b
Bicolor damselfish	MODERN SPECIES	1144														CUL5 (ENSSPAG00000004821)	slc35f2 (ENSSPAG00000004810)	rcc1l (ENSSPAG00000004790) #22	castor2 (ENSSPAG00000004766) #23	ENSSPAG00000004752	ENSSPAG00000004736
Pomacentridae_A	ANCESTRAL SPECIES	65	ENSGT00940000163875.a.b.b	ENSGT01030000234556.a.b.a	ENSGT00530000063743.b	ENSGT00950000183012.B.a	ENSGT00990000203615.b.b.a	ENSGT00390000006114	ENSGT00510000046732.A.c	ENSGT00530000064411.b	ENSGT00530000063816.c.a	ENSGT00940000156251.b	ENSGT00940000155350.h	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000156648.d	ENSGT00390000015655.a.m.b	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00940000155772.a.b
Spiny chromis	MODERN SPECIES	1459												ompb (ENSAPOG00000000799)	CAPN5 (ENSAPOG00000007662)	CUL5 (ENSAPOG00000007730)	slc35f2 (ENSAPOG00000007755)	rcc1l (ENSAPOG00000007810) #22
Amphiprion	ANCESTRAL SPECIES	71	ENSGT00940000163875.a.b.b	ENSGT01030000234556.a.b.a	ENSGT00530000063743.b	ENSGT00950000183012.B.a	ENSGT00990000203615.b.b.a	ENSGT00390000006114	ENSGT00510000046732.A.c	ENSGT00530000064411.b	ENSGT00530000063816.c.a	ENSGT00940000156251.b	ENSGT00940000155350.h	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000156648.d	ENSGT00390000015655.a.m.b	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00940000155772.a.b
Orange clownfish	MODERN SPECIES	6	rabep1 (ENSAPEG00000011338)	ENSAPEG00000011285	kcnj1b (ENSAPEG00000011228)	foxred1 (ENSAPEG00000011215)	FCHSD2 (ENSAPEG00000011205)	ENSAPEG00000011098	ENSAPEG00000011071	AQP11 (ENSAPEG00000011055)	ENSAPEG00000011042	MYO7A (ENSAPEG00000010851)	ompb (ENSAPEG00000010827)	CAPN5 (ENSAPEG00000010775)	setb (ENSAPEG00000010707)	CUL5 (ENSAPEG00000010633)	slc35f2 (ENSAPEG00000010522)	rcc1l (ENSAPEG00000010470) #22	castor2 (ENSAPEG00000010421) #23	DOC2B (ENSAPEG00000010376)	tmem248 (ENSAPEG00000010347)	lig3 (ENSAPEG00000010317)	rad51d (ENSAPEG00000010305)	tmem132e (ENSAPEG00000010174)	dtx2 (ENSAPEG00000010133)	GTF2IRD1 (ENSAPEG00000010030) #18	CLIP2 (ENSAPEG00000009995) #17	ENSAPEG00000009989	orai2 (ENSAPEG00000009978)	bckdk (ENSAPEG00000009926)	lrwd1 (ENSAPEG00000009743)	alkbh4 (ENSAPEG00000009732)	CBL (ENSAPEG00000009368)
Clown anemonefish	MODERN SPECIES	800																rcc1l (ENSAOCG00000017210) #22	castor2 (ENSAOCG00000001200) #23	ENSAOCG00000017251	DOC2B (ENSAOCG00000017274)
Percomorphaceae_C	ANCESTRAL SPECIES	10	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Percomorphaceae_D	ANCESTRAL SPECIES	16	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Carangaria	ANCESTRAL SPECIES	16	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426.p #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Pleuronectoidei	ANCESTRAL SPECIES	32	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426.p #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Turbot	MODERN SPECIES	16	ompb (ENSSMAG00000015574)	MYO7A (ENSSMAG00000015416)	ENSSMAG00000032239	ENSSMAG00000015371	ENSSMAG00000015302	ENSSMAG00000015221	ENSSMAG00000015191	ENSSMAG00000015180	ENSSMAG00000015173	ENSSMAG00000015049	mpzl1l (ENSSMAG00000015032)	ENSSMAG00000032956	emsy (ENSSMAG00000015001)	ENSSMAG00000035998	ENSSMAG00000014991	rcc1l (ENSSMAG00000014964) #22	castor2 (ENSSMAG00000031872) #23	ENSSMAG00000024921	ENSSMAG00000014938	tmem248 (ENSSMAG00000014905)	ENSSMAG00000014823	ENSSMAG00000014791	ENSSMAG00000014753	ENSSMAG00000014709	ENSSMAG00000014686 #18	cldn2 (ENSSMAG00000014506)	rbm41 (ENSSMAG00000014485)	klf8 (ENSSMAG00000031788)	klf5l (ENSSMAG00000014441)	pou4f4 (ENSSMAG00000027160)	ENSSMAG00000014223
Tongue sole	MODERN SPECIES	10	CAPN5 (ENSCSEG00000015427)	MYO7A (ENSCSEG00000015251)	ENSCSEG00000015202	ENSCSEG00000015230	ENSCSEG00000015171	FCHSD2 (ENSCSEG00000015081)	foxred1 (ENSCSEG00000015059)	kcnj1b (ENSCSEG00000015056)	ENSCSEG00000015046	rabep1 (ENSCSEG00000015015)	mpzl1l (ENSCSEG00000014998)	ENSCSEG00000014996	emsy (ENSCSEG00000014978)	ENSCSEG00000014864	tlcd5b (ENSCSEG00000014847)	rcc1l (ENSCSEG00000014772) #22	castor2 (ENSCSEG00000014753) #23	DOC2B (ENSCSEG00000014740)	tmem248 (ENSCSEG00000014724)	lig3 (ENSCSEG00000014666)	RAD51D (ENSCSEG00000014639)	ENSCSEG00000014634	ENSCSEG00000014628	f11r.1 (ENSCSEG00000014619)	ENSCSEG00000014608	ABCG4 (ENSCSEG00000014580)	kat5b (ENSCSEG00000014541)	dpagt1 (ENSCSEG00000014524)	ENSCSEG00000014517	SIPA1 (ENSCSEG00000014507)	SPTBN2 (ENSCSEG00000014336)
Carangaria_A	ANCESTRAL SPECIES	8	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426.p #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Seriola	ANCESTRAL SPECIES	2	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c.m	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426.p #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Greater amberjack	MODERN SPECIES	15	ompb (ENSSDUG00000007534)	MYO7A (ENSSDUG00000007550)	ENSSDUG00000007655	AQP11 (ENSSDUG00000007727)	ENSSDUG00000007741	FCHSD2 (ENSSDUG00000007822)	foxred1 (ENSSDUG00000007926)	kcnj1b (ENSSDUG00000007971)	ENSSDUG00000007984	rabep1 (ENSSDUG00000008003)	mpzl1l (ENSSDUG00000008060)	ENSSDUG00000008067	emsy (ENSSDUG00000008095)	ENSSDUG00000008245	tlcd5b (ENSSDUG00000008328)	rcc1l (ENSSDUG00000008345) #22	castor2 (ENSSDUG00000008391) #23	DOC2B (ENSSDUG00000008423)	tmem248 (ENSSDUG00000008448)	lig3 (ENSSDUG00000008477)	rad51d (ENSSDUG00000008515)	tmem132e (ENSSDUG00000008532)	dtx2 (ENSSDUG00000008583)	GTF2IRD1 (ENSSDUG00000008617) #18	CLIP2 (ENSSDUG00000008687) #17	cldn2 (ENSSDUG00000008792)	rbm41 (ENSSDUG00000008808)	klf8 (ENSSDUG00000008823)	klf5l (ENSSDUG00000008842)	pou4f4 (ENSSDUG00000008880)	SPRY3 (ENSSDUG00000008888)
Yellowtail amberjack	MODERN SPECIES	3202			AQP11 (ENSSLDG00000004065)	ENSSLDG00000003957	FCHSD2 (ENSSLDG00000003884)	ENSSLDG00000003849	foxred1 (ENSSLDG00000003787)	kcnj1b (ENSSLDG00000003772)	ENSSLDG00000003751	rabep1 (ENSSLDG00000003669)	mpzl1l (ENSSLDG00000003637)	ENSSLDG00000003630	emsy (ENSSLDG00000003313)	ENSSLDG00000003171	tlcd5b (ENSSLDG00000003152)	rcc1l (ENSSLDG00000003094) #22	castor2 (ENSSLDG00000003053) #23	DOC2B (ENSSLDG00000002982)	tmem248 (ENSSLDG00000002944)	lig3 (ENSSLDG00000002837)	rad51d (ENSSLDG00000002734)	tmem132e (ENSSLDG00000002704)	dtx2 (ENSSLDG00000002677)	GTF2IRD1 (ENSSLDG00000002437) #18	CLIP2 (ENSSLDG00000002285) #17	cldn2 (ENSSLDG00000002249)	rbm41 (ENSSLDG00000002232)	klf8 (ENSSLDG00000002215)	klf5l (ENSSLDG00000002204)	pou4f4 (ENSSLDG00000002179)	SPRY3 (ENSSLDG00000002157)
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	310																rcc1l (ENSLCAG00010007820) #22	castor2 (ENSLCAG00010007811) #23	DOC2B (ENSLCAG00010007803)	tmem248 (ENSLCAG00010007796)	lig3 (ENSLCAG00010007630)	rad51d (ENSLCAG00010007590)	tmem132e (ENSLCAG00010007571)	ENSLCAG00010007563	dtx2 (ENSLCAG00010007557)	GTF2IRD1 (ENSLCAG00010007548) #18	CLIP2 (ENSLCAG00010007543) #17
Barramundi perch	MODERN SPECIES	94	ENSLCAG00010009855	ENSLCAG00010009852	AQP11 (ENSLCAG00010009851)	ENSLCAG00010009849	FCHSD2 (ENSLCAG00010009768)	foxred1 (ENSLCAG00010009701)	kcnj1b (ENSLCAG00010009690)	ENSLCAG00010009688	ENSLCAG00010009687	rabep1 (ENSLCAG00010009583)	mpzl1l (ENSLCAG00010009553)	ENSLCAG00010009547	emsy (ENSLCAG00010009535)	ENSLCAG00010009376	tlcd5b (ENSLCAG00010009340)	rcc1l (ENSLCAG00010009331) #22
Anabantaria	ANCESTRAL SPECIES	13	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Zig-zag eel	MODERN SPECIES	5	ENSMAMG00000001817	ENSMAMG00000001667	ENSMAMG00000001646	ENSMAMG00000001623	ENSMAMG00000001547	ENSMAMG00000001495	ENSMAMG00000001452	ENSMAMG00000001430	ENSMAMG00000001418	ENSMAMG00000001354	mpzl1l (ENSMAMG00000027186)	ENSMAMG00000026881	emsy (ENSMAMG00000001261)	ENSMAMG00000001216	ENSMAMG00000001187	rcc1l (ENSMAMG00000001100) #22	castor2 (ENSMAMG00000001064) #23	ENSMAMG00000001008	tmem248 (ENSMAMG00000026845)	ENSMAMG00000000900	ENSMAMG00000000850	ENSMAMG00000000833	ENSMAMG00000000774	ENSMAMG00000000721 #18	ENSMAMG00000000615 #17	cldn2 (ENSMAMG00000000588)	rbm41 (ENSMAMG00000000581)	klf8 (ENSMAMG00000000578)	klf5l (ENSMAMG00000000552)	pou4f4 (ENSMAMG00000000528)	ENSMAMG00000000513
Anabantoidei	ANCESTRAL SPECIES	12	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Climbing perch	MODERN SPECIES	5	CAPN5 (ENSATEG00000000315)	MYO7A (ENSATEG00000000073)	GDPD4 (ENSATEG00000000053)	ENSATEG00000023313	ENSATEG00000023296	ENSATEG00000023272	ENSATEG00000023255	ENSATEG00000023244	ENSATEG00000023239	ENSATEG00000023217	mpzl1l (ENSATEG00000029159)	ENSATEG00000023203	emsy (ENSATEG00000023194)	ENSATEG00000026928	ENSATEG00000023177	rcc1l (ENSATEG00000023157) #22	castor2 (ENSATEG00000023144) #23	ENSATEG00000023135	tmem248 (ENSATEG00000023124)	ENSATEG00000023092	ENSATEG00000023087	ENSATEG00000023074	ENSATEG00000023058	ENSATEG00000027940	ENSATEG00000022547	ENSATEG00000023046 #18	ENSATEG00000023003 #17	cldn2 (ENSATEG00000022978)	rbm41 (ENSATEG00000022968)	klf8 (ENSATEG00000022946)	klf5l (ENSATEG00000022909)
Siamese fighting fish	MODERN SPECIES	5	ompb (ENSBSLG00000015121)	MYO7A (ENSBSLG00000015124)	ENSBSLG00000015677	AQP11 (ENSBSLG00000015706)	ENSBSLG00000015712	FCHSD2 (ENSBSLG00000015745)	foxred1 (ENSBSLG00000015901)	kcnj1b (ENSBSLG00000015983)	ENSBSLG00000015986	rabep1 (ENSBSLG00000016006)	mpzl1l (ENSBSLG00000016417)	ENSBSLG00000016421	emsy (ENSBSLG00000016423)	ENSBSLG00000016441	tlcd5b (ENSBSLG00000016467)	rcc1l (ENSBSLG00000016472) #22	castor2 (ENSBSLG00000016483) #23	DOC2B (ENSBSLG00000016488)	ENSBSLG00000016500	tmem248 (ENSBSLG00000016504)	lig3 (ENSBSLG00000016516)	rad51d (ENSBSLG00000016721)	tmem132e (ENSBSLG00000016891)	dtx2 (ENSBSLG00000016964)	GTF2IRD1 (ENSBSLG00000017004) #18	CLIP2 (ENSBSLG00000017162) #17	cldn2 (ENSBSLG00000017430)	rbm41 (ENSBSLG00000017440)	klf8 (ENSBSLG00000017461)	klf5l (ENSBSLG00000017485)	pou4f4 (ENSBSLG00000017497)
Eupercaria	ANCESTRAL SPECIES	26	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Tetraodontidae	ANCESTRAL SPECIES	6												ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785.d	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Fugu	MODERN SPECIES	6	HTR3A (ENSTRUG00000013117)	ENSTRUG00000013084	USP28 (ENSTRUG00000012940)	bckdk (ENSTRUG00000012782)	smim8 (ENSTRUG00000026822)	ddx51 (ENSTRUG00000012670)	ENSTRUG00000030306	lrwd1 (ENSTRUG00000012493)	CBL (ENSTRUG00000012330)	ENSTRUG00000012139	tmem120aa (ENSTRUG00000012088)	ENSTRUG00000012055	emsy (ENSTRUG00000011995)	ENSTRUG00000011716	tlcd5b (ENSTRUG00000011690)	rcc1l (ENSTRUG00000011571) #22	castor2 (ENSTRUG00000011388) #23	DOC2B (ENSTRUG00000011234)	tmem248 (ENSTRUG00000011138)	lig3 (ENSTRUG00000010827)	rad51d (ENSTRUG00000010643)	tmem132e (ENSTRUG00000010494)	ENSTRUG00000027613	ENSTRUG00000028244	dtx2 (ENSTRUG00000032722)	dtx2 (ENSTRUG00000010312)	ENSTRUG00000020847 #18	cldn2 (ENSTRUG00000009854)	rbm41 (ENSTRUG00000028542)	klf8 (ENSTRUG00000009714)	GTF2IRD1 (ENSTRUG00000010068) #18
Tetraodon	MODERN SPECIES	26	ENSTNIG00000007162	USP28 (ENSTNIG00000018679)	bckdk (ENSTNIG00000010283)	smim8 (ENSTNIG00000010282)	ddx51 (ENSTNIG00000010281)	ENSTNIG00000010280	lrwd1 (ENSTNIG00000010279)	alkbh4 (ENSTNIG00000001293)	CBL (ENSTNIG00000010278)	MCAM (ENSTNIG00000010277)	tmem120aa (ENSTNIG00000010276)	ENSTNIG00000000439	emsy (ENSTNIG00000010275)	ENSTNIG00000010274	tlcd5b (ENSTNIG00000000509)	rcc1l (ENSTNIG00000010273) #22	castor2 (ENSTNIG00000010272) #23	DOC2B (ENSTNIG00000010271)	lig3 (ENSTNIG00000010270)	rad51d (ENSTNIG00000010269)	tmem132e (ENSTNIG00000010268)	dtx2 (ENSTNIG00000004696)	GTF2IRD1 (ENSTNIG00000004695) #18	CLIP2 (ENSTNIG00000004694) #17	cldn2 (ENSTNIG00000004693)	rbm41 (ENSTNIG00000004692)	klf8 (ENSTNIG00000004690)	klf5l (ENSTNIG00000004691)	krt15 (ENSTNIG00000004865)	ENSTNIG00000004864	jupa (ENSTNIG00000004863)
Eupecaria_A	ANCESTRAL SPECIES	25	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	273	GDPD4 (ENSLBEG00000025490)	AQP11 (ENSLBEG00000025513)	ENSLBEG00000025539	FCHSD2 (ENSLBEG00000025605)	ENSLBEG00000025639	foxred1 (ENSLBEG00000025655)	kcnj1b (ENSLBEG00000025676)	ENSLBEG00000025688	ENSLBEG00000025701	rabep1 (ENSLBEG00000025724)	mpzl1l (ENSLBEG00000025782)	ENSLBEG00000025799	emsy (ENSLBEG00000025814)	ENSLBEG00000025882	tlcd5b (ENSLBEG00000025986)	rcc1l (ENSLBEG00000026004) #22	castor2 (ENSLBEG00000026038) #23	DOC2B (ENSLBEG00000026081)	tmem248 (ENSLBEG00000026117)	lig3 (ENSLBEG00000026219)	rad51d (ENSLBEG00000026302)	tmem132e (ENSLBEG00000026322)
Ballan wrasse	MODERN SPECIES	1621																rcc1l (ENSLBEG00000008193) #22	castor2 (ENSLBEG00000008225) #23
Eupecaria_B	ANCESTRAL SPECIES	25	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Perciformes	ANCESTRAL SPECIES	26	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Cottioidei	ANCESTRAL SPECIES	70	ENSGT00390000018533	ENSGT00990000203615.b.a.a.a.b	ENSGT00950000183064.b	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17
Lumpfish	MODERN SPECIES	5	zbtb16a (ENSCLMG00005002505)	HTR3A (ENSCLMG00005002504)	HTR3B (ENSCLMG00005002502)	ENSCLMG00005002501	USP28 (ENSCLMG00005002496)	orai2 (ENSCLMG00005002492)	bckdk (ENSCLMG00005002325)	lrwd1 (ENSCLMG00005002323)	alkbh4 (ENSCLMG00005002322)	CBL (ENSCLMG00005002297)	ENSCLMG00005002171	tmem120aa (ENSCLMG00005001598)	styxl1 (ENSCLMG00005001379)	ENSCLMG00005021552	ENSCLMG00005021551	rcc1l (ENSCLMG00005021550) #22	castor2 (ENSCLMG00005021549) #23	DOC2B (ENSCLMG00005021546)	tmem248 (ENSCLMG00005021545)	lig3 (ENSCLMG00005020771)	rad51d (ENSCLMG00005020746)	tmem132e (ENSCLMG00005020745)	ENSCLMG00005020744	dtx2 (ENSCLMG00005020742)	GTF2IRD1 (ENSCLMG00005020740) #18	CLIP2 (ENSCLMG00005020734) #17	zgc:123105 (ENSCLMG00005020732)	ENSCLMG00005020730	pou4f4 (ENSCLMG00005020729)	klf5l (ENSCLMG00005020727)	klf8 (ENSCLMG00005020725)
Stickleback	MODERN SPECIES	7	p4ha2 (ENSGACG00000020865)	pdlim4 (ENSGACG00000020864)	vps26c (ENSGACG00000020863)	ENSGACG00000020862	AQP11 (ENSGACG00000020861)	ENSGACG00000020860	ENSGACG00000020859	FCHSD2 (ENSGACG00000020858)	foxred1 (ENSGACG00000020857)	ENSGACG00000020856	rabep1 (ENSGACG00000020855)	ENSGACG00000020854	emsy (ENSGACG00000020853)	ENSGACG00000020852	tlcd5b (ENSGACG00000020851)	rcc1l (ENSGACG00000020850) #22	castor2 (ENSGACG00000020849) #23	DOC2B (ENSGACG00000020848)	tmem248 (ENSGACG00000020847)	lig3 (ENSGACG00000020846)	rad51d (ENSGACG00000020845)	GTF2IRD1 (ENSGACG00000020844) #18	CLIP2 (ENSGACG00000020843) #17	rbm41 (ENSGACG00000020842)	klf5l (ENSGACG00000020841)	pou4f4 (ENSGACG00000020840)	ENSGACG00000020839	KLHL10 (ENSGACG00000020838)	zgc:123105 (ENSGACG00000020837)	clk4b (ENSGACG00000020836)	GPR119 (ENSGACG00000020835)
Perciformes_a	ANCESTRAL SPECIES	28	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT01000000215988	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Pike perch	MODERN SPECIES	22	CAPN5 (ENSSLUG00000010588)	MYO7A (ENSSLUG00000010473)	GDPD4 (ENSSLUG00000010437)	AQP11 (ENSSLUG00000010425)	ENSSLUG00000010413	FCHSD2 (ENSSLUG00000009890)	foxred1 (ENSSLUG00000009775)	kcnj1b (ENSSLUG00000009737)	ENSSLUG00000009721	rabep1 (ENSSLUG00000007194)	mpzl1l (ENSSLUG00000006930)	ENSSLUG00000006923	emsy (ENSSLUG00000006888)	ENSSLUG00000006853	tlcd5b (ENSSLUG00000006841)	rcc1l (ENSSLUG00000006830) #22	castor2 (ENSSLUG00000006802) #23	ENSSLUG00000006794	DOC2B (ENSSLUG00000006783)	tmem248 (ENSSLUG00000006767)	lig3 (ENSSLUG00000006348)	rad51d (ENSSLUG00000006279)	tmem132e (ENSSLUG00000006130)	dtx2 (ENSSLUG00000006090)	GTF2IRD1 (ENSSLUG00000006070) #18	ENSSLUG00000006061	CLIP2 (ENSSLUG00000005434) #17	cldn2 (ENSSLUG00000005340)	rbm41 (ENSSLUG00000005317)	klf8 (ENSSLUG00000005272)	klf5l (ENSSLUG00000005237)
Channel bull blenny	MODERN SPECIES	96	ENSCGOG00000010126	ENSCGOG00000014902	AQP11 (ENSCGOG00000014906)	ENSCGOG00000014908	ENSCGOG00000014910	foxred1 (ENSCGOG00000014919)	kcnj1b (ENSCGOG00000014942)	ENSCGOG00000014944	ENSCGOG00000014958	ENSCGOG00000014986	tlcd5b (ENSCGOG00000014991)	ENSCGOG00000015006	ENSCGOG00000015052	tlcd5b (ENSCGOG00000015134)	ENSCGOG00000015138	rcc1l (ENSCGOG00000015139) #22	ENSCGOG00000015212
Eupecaria_C	ANCESTRAL SPECIES	32	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
Gilthead seabream	MODERN SPECIES	4	btg4 (ENSSAUG00010011959)	slc25a14 (ENSSAUG00010011952)	GPR119 (ENSSAUG00010011947)	ENSSAUG00010011944	ENSSAUG00010011941	ENSSAUG00010011939	foxred1 (ENSSAUG00010011936)	ENSSAUG00010011932	kcnj1b (ENSSAUG00010011931)	ENSSAUG00010011930	rabep1 (ENSSAUG00010010313)	mpzl1l (ENSSAUG00010010262)	ENSSAUG00010010257	emsy (ENSSAUG00010010248)	tlcd5b (ENSSAUG00010010229)	rcc1l (ENSSAUG00010009910) #22	ENSSAUG00010009900	tmem248 (ENSSAUG00010009896)	ENSSAUG00010009893	rad51d (ENSSAUG00010009890)	tmem132e (ENSSAUG00010009888)	lig3 (ENSSAUG00010009824)	ENSSAUG00010009817	dtx2 (ENSSAUG00010009816)	GTF2IRD1 (ENSSAUG00010009806) #18	CLIP2 (ENSSAUG00010009799) #17	cldn2 (ENSSAUG00010009797)	rbm41 (ENSSAUG00010009795)	klf8 (ENSSAUG00010009793)	klf5l (ENSSAUG00010009791)	ENSSAUG00010009790
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c	ENSGT00390000006114	ENSGT00990000203615.b.b.a	ENSGT00950000183012.B.a	ENSGT00530000063743.b	ENSGT01030000234556.a.b.a	ENSGT00940000163875.a.b.b	ENSGT00390000009554	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000156492	ENSGT00940000159095	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160785	ENSGT00530000063786.b	ENSGT00940000161062	ENSGT00940000164016	ENSGT00940000165106	ENSGT00950000183055.a.b
European seabass	MODERN SPECIES	4	MYO7A (ENSDLAG00005021005)	ENSDLAG00005020939	GDPD4 (ENSDLAG00005020922)	ENSDLAG00005029942	ENSDLAG00005020900	ENSDLAG00005020844	ENSDLAG00005020696	ENSDLAG00005020682	ENSDLAG00005020674	ENSDLAG00005020223	mpzl1l (ENSDLAG00005020196)	ENSDLAG00005020183	emsy (ENSDLAG00005020162)	ENSDLAG00005019993	ENSDLAG00005019989	rcc1l (ENSDLAG00005019919) #22	castor2 (ENSDLAG00005019867) #23	ENSDLAG00005019763	tmem248 (ENSDLAG00005019738)	lig3 (ENSDLAG00005017783)	ENSDLAG00005017663	ENSDLAG00005017647	ENSDLAG00005017633	ENSDLAG00005017604 #18	ENSDLAG00005017419 #17	cldn2 (ENSDLAG00005027599)	rbm41 (ENSDLAG00005017375)	klf8 (ENSDLAG00005027645)	klf5l (ENSDLAG00005031919)	pou4f4 (ENSDLAG00005030994)	ENSDLAG00005032640
Large yellow croaker	MODERN SPECIES	2	MYO7A (ENSLCRG00005000522)	GDPD4 (ENSLCRG00005000515)	AQP11 (ENSLCRG00005000514)	ENSLCRG00005000510	FCHSD2 (ENSLCRG00005000506)	foxred1 (ENSLCRG00005000484)	kcnj1b (ENSLCRG00005000480)	ENSLCRG00005000479	rabep1 (ENSLCRG00005000289)	ENSLCRG00005000220	mpzl1l (ENSLCRG00005000209)	ENSLCRG00005000201	emsy (ENSLCRG00005000172)	ENSLCRG00005000117	tlcd5b (ENSLCRG00005000100)	rcc1l (ENSLCRG00005000088) #22	castor2 (ENSLCRG00005015625) #23	DOC2B (ENSLCRG00005015574)	tmem248 (ENSLCRG00005015569)	lig3 (ENSLCRG00005015409)	rad51d (ENSLCRG00005015405)	tmem132e (ENSLCRG00005015404)	dtx2 (ENSLCRG00005015402)	GTF2IRD1 (ENSLCRG00005015399) #18	CLIP2 (ENSLCRG00005015040) #17	ENSLCRG00005015031	cldn2 (ENSLCRG00005015029)	rbm41 (ENSLCRG00005015028)	klf8 (ENSLCRG00005015027)	klf5l (ENSLCRG00005015026)	pou4f4 (ENSLCRG00005015025)
Pinecone sodierfish	MODERN SPECIES	5	ENSMMDG00005010536	ENSMMDG00005010534	FCHSD2 (ENSMMDG00005010529)	ENSMMDG00005010526	foxred1 (ENSMMDG00005010328)	kcnj1b (ENSMMDG00005010321)	ENSMMDG00005010320	rabep1 (ENSMMDG00005008501)	mpzl1l (ENSMMDG00005008442)	ENSMMDG00005008440	emsy (ENSMMDG00005008415)	ENSMMDG00005008401	ENSMMDG00005008393	ENSMMDG00005008388	tlcd5b (ENSMMDG00005008386)	rcc1l (ENSMMDG00005008269) #22	castor2 (ENSMMDG00005008253) #23	DOC2B (ENSMMDG00005008230)	ENSMMDG00005008223	tmem248 (ENSMMDG00005008217)	lig3 (ENSMMDG00005004307)	rad51d (ENSMMDG00005003981)	tmem132e (ENSMMDG00005003826)	dtx2 (ENSMMDG00005003811)	GTF2IRD1 (ENSMMDG00005003802) #18	CLIP2 (ENSMMDG00005003765) #17	ENSMMDG00005003753	KIRREL3 (ENSMMDG00005003613)	smfn (ENSMMDG00005003502)	ENSMMDG00005003484	GRAMD1B (ENSMMDG00005003035)
Cod	MODERN SPECIES	20	ENSGMOG00000033881	dlg2 (ENSGMOG00000004138)	ENSGMOG00000027831	ENSGMOG00000001181	picalma (ENSGMOG00000001140)	ZPLD1 (ENSGMOG00000017836)	ENSGMOG00000025426	alcama (ENSGMOG00000018059)	CBLB (ENSGMOG00000017936)	ENSGMOG00000031267	ENSGMOG00000017678	ENSGMOG00000017578	ENSGMOG00000017350	ENSGMOG00000034849	ENSGMOG00000017344	rcc1l (ENSGMOG00000017319) #22	castor2 (ENSGMOG00000017310) #23	ENSGMOG00000017287	tmem248 (ENSGMOG00000003359)	ENSGMOG00000003307	ENSGMOG00000003267	tmem132e (ENSGMOG00000030984)	ENSGMOG00000013676	ENSGMOG00000013638 #18	ENSGMOG00000013615 #17	ENSGMOG00000031546	smfn (ENSGMOG00000006370)	ENSGMOG00000036095	ENSGMOG00000006457	ENSGMOG00000006673	ENSGMOG00000006998
Protacanthopterygii	ANCESTRAL SPECIES	44	ENSGT00390000006659	ENSGT00800000125277	ENSGT00440000039324.d	ENSGT01100000263551.a.a	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000155587.a.a.a	ENSGT00390000012008.a	ENSGT00940000157627	ENSGT00390000008162.e	ENSGT00940000157662.g.a	ENSGT00390000007799	ENSGT00390000006115	ENSGT00940000162993	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758.w.a.a.a	ENSGT00940000173997	ENSGT00940000156758.w.a.a.b	ENSGT00940000153883.b	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160149	ENSGT01030000234556.a.b.a	ENSGT00940000161093	ENSGT00940000163875.a.b.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	35	ENSGT00800000125277	ENSGT00940000177774	ENSGT01100000263551.a.a.c	ENSGT00500000044966	ENSGT00940000158657.g	ENSGT00940000155587.a.a.a	ENSGT00390000012008.a.c	ENSGT00940000157627.e	ENSGT00390000008162.e	ENSGT00940000157662.g.a.b	ENSGT00940000159111.j	ENSGT00390000007799	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.e	ENSGT00940000178427	ENSGT00940000160014.d #20	ENSGT00940000157317.m #22	ENSGT00390000006208.a.i #23	ENSGT00940000173997	ENSGT00940000156758.w.a.a.b	ENSGT00940000153883.b.i	ENSGT00940000159095	ENSGT00940000156492.k	ENSGT00940000158479.e	ENSGT00940000157641.k	ENSGT00940000159414.e #18	ENSGT00940000159426.u.a #17	ENSGT00940000160149	ENSGT01030000234556.a.b.a.g	ENSGT00940000163875.a.b.b.b	ENSGT00390000009554.h
Salmoninae_a	ANCESTRAL SPECIES	44	ENSGT00940000177774	ENSGT01100000263551.a.a.c	ENSGT00500000044966	ENSGT00940000158657.g	ENSGT00940000155587.a.a.a	ENSGT00390000012008.a.c	ENSGT00940000157627.e	ENSGT00390000008162.e	ENSGT00940000157662.g.a.b	ENSGT00940000159111.j	ENSGT00390000007799	ENSGT00390000006115	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.e	ENSGT00940000178427	ENSGT00940000160014.d #20	ENSGT00940000157317.m #22	ENSGT00390000006208.a.i #23	ENSGT00940000173997	ENSGT00940000156758.w.b	ENSGT00440000034248	ENSGT00940000156758.w.a.a.b	ENSGT00940000153883.b.i	ENSGT00940000159095	ENSGT00940000156492.k	ENSGT00940000158479.e	ENSGT00940000157641.k	ENSGT00940000159414.e #18	ENSGT00940000159426.u.a #17	ENSGT00940000160149	ENSGT01030000234556.a.b.a.h	ENSGT00940000161093
Oncorhynchus	ANCESTRAL SPECIES	41	ENSGT00940000177774	ENSGT01100000263551.a.a.c	ENSGT00500000044966	ENSGT00940000158657.g	ENSGT00940000155587.a.a.a	ENSGT00390000012008.a.c	ENSGT00940000157627.e	ENSGT00390000008162.e	ENSGT00940000157662.g.a.b	ENSGT00940000159111.j	ENSGT00390000007799	ENSGT00940000178427	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.e	ENSGT00390000006115	ENSGT00940000160014.d #20	ENSGT00940000157317.m #22	ENSGT00390000006208.a.i #23	ENSGT00940000173997	ENSGT00940000156758.w.a.a.b	ENSGT00940000153883.b.i	ENSGT00940000159095	ENSGT00940000156492.k	ENSGT00940000158479.e	ENSGT00940000157641.k	ENSGT00940000159414.e #18	ENSGT00940000159426.u.a #17	ENSGT00940000160149	ENSGT01030000234556.a.b.a.h	ENSGT00940000161093	ENSGT00940000163875.a.b.b.a	ENSGT00390000009554.g
Oncorhynchus_a	ANCESTRAL SPECIES	43	ENSGT01100000263551.a.a.c	ENSGT00500000044966	ENSGT00940000158657.g	ENSGT00940000155587.a.a.a	ENSGT00390000012008.a.c	ENSGT00940000157627.e	ENSGT00390000008162.e	ENSGT00940000157662.g.a.b	ENSGT00970000193754.a.a	ENSGT00940000159111.j	ENSGT00390000007799	ENSGT00940000178427	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.e	ENSGT00390000006115	ENSGT00940000160014.d #20	ENSGT00940000157317.m #22	ENSGT00390000006208.a.i #23	ENSGT00940000173997	ENSGT00940000156758.w.a.a.b	ENSGT00940000153883.b.i	ENSGT00940000159095	ENSGT00940000156492.k	ENSGT00940000158479.e	ENSGT00940000157641.k	ENSGT00940000159414.e #18	ENSGT00940000159426.u.a #17	ENSGT00940000160149	ENSGT01030000234556.a.b.a.h	ENSGT00940000161093	ENSGT00940000163875.a.b.b.a	ENSGT00390000009554.g
Coho salmon	MODERN SPECIES	20	ENSOKIG00005024145	ENSOKIG00005024159	ENSOKIG00005024167	ENSOKIG00005024178	slc37a2 (ENSOKIG00005024266)	ENSOKIG00005026152	OAF (ENSOKIG00005026349)	pou2f3 (ENSOKIG00005026363)	tlcd5b (ENSOKIG00005026381)	ARHGEF12 (ENSOKIG00005026411)	ENSOKIG00005026560	GRIK4 (ENSOKIG00005026573)	cenatac (ENSOKIG00005026650)	ENSOKIG00005026660	ncf1 (ENSOKIG00005026698) #20	rcc1l (ENSOKIG00005026851) #22	castor2 (ENSOKIG00005026926) #23	ENSOKIG00005027056	ENSOKIG00005027070	DOC2B (ENSOKIG00005027083)	tmem248 (ENSOKIG00005027144)	rad51d (ENSOKIG00005027186)	lig3 (ENSOKIG00005027391)	tmem132e (ENSOKIG00005029649)	dtx2 (ENSOKIG00005029662)	GTF2IRD1 (ENSOKIG00005029692) #18	ENSOKIG00005029848	CLIP2 (ENSOKIG00005029877) #17	rasa4 (ENSOKIG00005030293)	ENSOKIG00005030414	ENSOKIG00005030424
Chinook salmon	MODERN SPECIES	23	ENSOTSG00005036617	HEPACAM (ENSOTSG00005036614)	ENSOTSG00005036612	ENSOTSG00005036349	ENSOTSG00005036336	pou2f3 (ENSOTSG00005036331)	tlcd5b (ENSOTSG00005036330)	ENSOTSG00005036328	ARHGEF12 (ENSOTSG00005036326)	ENSOTSG00005036324	GRIK4 (ENSOTSG00005036320)	cenatac (ENSOTSG00005036312)	ENSOTSG00005036310	ENSOTSG00005036308	ncf1 (ENSOTSG00005036261) #20	rcc1l (ENSOTSG00005036220) #22	castor2 (ENSOTSG00005036168) #23	ENSOTSG00005036163	DOC2B (ENSOTSG00005036156)	tmem248 (ENSOTSG00005036152)	rad51d (ENSOTSG00005021622)	lig3 (ENSOTSG00005020684)	tmem132e (ENSOTSG00005020667)	dtx2 (ENSOTSG00005020666)	ENSOTSG00005020663 #18	CLIP2 (ENSOTSG00005020659) #17	rasa4 (ENSOTSG00005020657)	mpzl1l (ENSOTSG00005020654)	KLHL35 (ENSOTSG00005020652)	ENSOTSG00005020651	emsy (ENSOTSG00005020610)
Rainbow trout	MODERN SPECIES	1	ENSOMYG00000034500	ENSOMYG00000034476	ENSOMYG00000063258	ENSOMYG00000034466	ENSOMYG00000034457	slc37a2 (ENSOMYG00000033593)	ENSOMYG00000033399	OAF (ENSOMYG00000033358)	pou2f3 (ENSOMYG00000033350)	tlcd5b (ENSOMYG00000033341)	ARHGEF12 (ENSOMYG00000033234)	GRIK4 (ENSOMYG00000033071)	cenatac (ENSOMYG00000032974)	ENSOMYG00000032927	ncf1 (ENSOMYG00000032820) #20	rcc1l (ENSOMYG00000032735) #22	castor2 (ENSOMYG00000032718) #23	ENSOMYG00000032695	ENSOMYG00000054380	ENSOMYG00000032579	tmem248 (ENSOMYG00000032543)	rad51d (ENSOMYG00000032521)	lig3 (ENSOMYG00000032273)	tmem132e (ENSOMYG00000032176)	ENSOMYG00000067746	ENSOMYG00000075704	dtx2 (ENSOMYG00000032170)	ENSOMYG00000032157 #18	ENSOMYG00000031945 #17	rasa4 (ENSOMYG00000031716)	mpzl1l (ENSOMYG00000031639)
Salmo	ANCESTRAL SPECIES	17	ENSGT00800000125277	ENSGT00940000177774	ENSGT01100000263551.a.a.c	ENSGT00500000044966	ENSGT00940000158657.g	ENSGT00940000155587.a.a.a	ENSGT00390000012008.a.c	ENSGT00940000157627.e	ENSGT00390000008162.e	ENSGT00940000157662.g.a.b	ENSGT00940000159111.j	ENSGT00390000007799	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.e	ENSGT00390000006115	ENSGT00940000160014.d #20	ENSGT00940000157317.m #22	ENSGT00390000006208.a.i #23	ENSGT00940000173997	ENSGT00940000156758.w.b	ENSGT00440000034248	ENSGT00940000153883.b.i	ENSGT00940000159095	ENSGT00940000156492.k	ENSGT00940000158479.e	ENSGT00940000157641.k	ENSGT00940000159414.e #18	ENSGT00940000159426.u.a #17	ENSGT00940000160149	ENSGT01030000234556.a.b.a.h	ENSGT00940000161093	ENSGT00940000163875.a.b.b.a
River trout	MODERN SPECIES	10	ENSSTUG00000041571	ENSSTUG00000041548	HEPACAM (ENSSTUG00000041533)	ENSSTUG00000041508	slc37a2 (ENSSTUG00000039367)	ENSSTUG00000039098	OAF (ENSSTUG00000039059)	pou2f3 (ENSSTUG00000039049)	tlcd5b (ENSSTUG00000039036)	ARHGEF12 (ENSSTUG00000038759)	GRIK4 (ENSSTUG00000038662)	cenatac (ENSSTUG00000038625)	ENSSTUG00000038611	ENSSTUG00000038596	ncf1 (ENSSTUG00000038479) #20	rcc1l (ENSSTUG00000038308) #22	castor2 (ENSSTUG00000038257) #23	ENSSTUG00000038223	ENSSTUG00000038201	ENSSTUG00000038191	tmem248 (ENSSTUG00000038161)	rad51d (ENSSTUG00000038129)	lig3 (ENSSTUG00000036531)	tmem132e (ENSSTUG00000036478)	dtx2 (ENSSTUG00000036467)	ENSSTUG00000036355 #18	CLIP2 (ENSSTUG00000036237) #17	rasa4 (ENSSTUG00000035955)	mpzl1l (ENSSTUG00000035916)	ENSSTUG00000035909	KLHL35 (ENSSTUG00000035867)
Atlantic salmon	MODERN SPECIES	23	NEUG (ENSSSAG00000009082)	ENSSSAG00000009095	ENSSSAG00000090678	ENSSSAG00000009351	ENSSSAG00000037950	OAF (ENSSSAG00000118800)	pou2f3 (ENSSSAG00000039114)	ENSSSAG00000084996	tlcd5b (ENSSSAG00000084363)	ARHGEF12 (ENSSSAG00000039510)	GRIK4 (ENSSSAG00000040220)	cenatac (ENSSSAG00000041880)	ENSSSAG00000100142	zgc:194948 (ENSSSAG00000041918)	ncf1 (ENSSSAG00000041940) #20	rcc1l (ENSSSAG00000042111) #22	castor2 (ENSSSAG00000042315) #23	ENSSSAG00000088875	ENSSSAG00000106772	ENSSSAG00000115964	ENSSSAG00000042464	tmem248 (ENSSSAG00000042662)	rad51d (ENSSSAG00000042688)	lig3 (ENSSSAG00000042916)	tmem132e (ENSSSAG00000055628)	ENSSSAG00000119884	dtx2 (ENSSSAG00000055664)	ENSSSAG00000055690 #18	ENSSSAG00000055776 #17	rasa4 (ENSSSAG00000055962)	mpzl1l (ENSSSAG00000061098)
Huchen	MODERN SPECIES	106								ENSHHUG00000021494	ENSHHUG00000021550	ENSHHUG00000021565	cenatac (ENSHHUG00000021669)	ENSHHUG00000021677	ENSHHUG00000021680	ENSHHUG00000021689	ncf1 (ENSHHUG00000021697) #20	rcc1l (ENSHHUG00000021996) #22	castor2 (ENSHHUG00000022011) #23	ENSHHUG00000022060	DOC2B (ENSHHUG00000022073)	tmem248 (ENSHHUG00000022132)	rad51d (ENSHHUG00000022152)	lig3 (ENSHHUG00000022285)	tmem132e (ENSHHUG00000022479)	ENSHHUG00000022489	ENSHHUG00000022497	dtx2 (ENSHHUG00000022501)	ENSHHUG00000022504 #18	CLIP2 (ENSHHUG00000022551) #17	rasa4 (ENSHHUG00000022592)
Salmoninae	ANCESTRAL SPECIES	880											ENSGT00390000012008.a.d	ENSGT00940000157627.f	ENSGT00940000157662.g.a.a	ENSGT00940000162993	ENSGT00940000160014.c #20	ENSGT00940000157317.n #22	ENSGT00390000006208.a.j #23	ENSGT00940000156758.w.a.a.a
Salmoninae_a	ANCESTRAL SPECIES	4	ENSGT00940000155545.b.e	ENSGT00950000183155.a.a.a.b.d	ENSGT00530000063405.b.f.f	ENSGT00940000161847.b.a.e.a.b.a.a	ENSGT00950000183127.c.b.d.a.a.b.j	ENSGT00390000006659.eb	ENSGT00440000039324.d	ENSGT01100000263551.a.a.d	ENSGT00940000158657.h	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b	ENSGT00390000012008.a.d	ENSGT00940000157627.f	ENSGT00940000157662.g.a.a	ENSGT00940000162993	ENSGT00940000160014.c #20	ENSGT00940000157317.n #22	ENSGT00390000006208.a.j #23	ENSGT00940000156758.w.a.a.a	ENSGT01090000260030.a.b.a.b.b.b.c.b	ENSGT00990000203615.b.b.a	ENSGT00940000157126.f.c	ENSGT00940000164937.a.b.c	ENSGT00940000156649.c.b.f	ENSGT00950000183181.B.b.l.a.d	ENSGT01030000234517.F.d	ENSGT00940000159359.s.a	ENSGT00940000156765.a.b.b	ENSGT00940000155156.b.f	ENSGT01040000240375.D	ENSGT00520000055616.a.e	ENSGT00390000016589.d
Oncorhynchus	ANCESTRAL SPECIES	4	ENSGT00940000155545.b.e	ENSGT00950000183155.a.a.a.b.d	ENSGT00530000063405.b.f.f	ENSGT00940000161847.b.a.e.a.b.a.a	ENSGT00950000183127.c.b.d.a.a.b.j	ENSGT00390000006659.eb	ENSGT00440000039324.d	ENSGT01100000263551.a.a.d	ENSGT00940000158657.h	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b	ENSGT00390000012008.a.d	ENSGT00940000157627.f	ENSGT00940000157662.g.a.a	ENSGT00940000162993	ENSGT00940000160014.c #20	ENSGT00940000157317.n #22	ENSGT00390000006208.a.j #23	ENSGT00940000156758.w.a.a.a	ENSGT00940000158479.f	ENSGT00940000157641.l	ENSGT00940000159414.f.b #18	ENSGT00940000159426.u.b #17	ENSGT01030000234556.a.b.a.g	ENSGT00940000163875.a.b.b.b	ENSGT00390000009554.h	ENSGT01100000263505.b.b.b.b.a	ENSGT01090000260030.a.b.a.b.b.b.c.b	ENSGT00990000203615.b.b.a	ENSGT00940000157126.f.c	ENSGT00940000164937.a.b.c	ENSGT00940000156649.c.b.f
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000013575	ENSOMYG00000013581	ENSOMYG00000050316	ENSOMYG00000013600	ENSOMYG00000069267	ENSOMYG00000052060	ENSOMYG00000071149	ENSOMYG00000013619	slc37a2 (ENSOMYG00000013693)	ENSOMYG00000013861	OAF (ENSOMYG00000013865)	pou2f3 (ENSOMYG00000013879)	ARHGEF12 (ENSOMYG00000013938)	ENSOMYG00000014057	p47phox (ENSOMYG00000014111) #20	ENSOMYG00000055909 #22	castor2 (ENSOMYG00000014267) #23	ENSOMYG00000014393	tmem132e (ENSOMYG00000014486)	dtx2 (ENSOMYG00000014506)	ENSOMYG00000014519 #18	ENSOMYG00000014553 #17	mpzl1l (ENSOMYG00000014613)	ENSOMYG00000014619	emsy (ENSOMYG00000014644)	ENSOMYG00000014685	ENSOMYG00000014693	ENSOMYG00000014700	ENSOMYG00000014715	ENSOMYG00000014762	ENSOMYG00000015054
Oncorhynchus_a	ANCESTRAL SPECIES	2	ENSGT00950000183155.a.a.a.b.d	ENSGT00530000063405.b.f.f.a	ENSGT00940000161847.b.a.e.a.b.a.a	ENSGT00950000183127.c.b.d.a.a.b.j	ENSGT00390000006659.eb	ENSGT00440000039324.d	ENSGT01100000263551.a.a.d	ENSGT00940000158657.h	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b	ENSGT00390000012008.a.d	ENSGT00940000157627.f	ENSGT00940000157662.g.a.a	ENSGT00940000162993	ENSGT01000000222024	ENSGT00940000160014.c #20	ENSGT00940000157317.n #22	ENSGT00390000006208.a.j #23	ENSGT00940000156758.w.a.a.a	ENSGT00940000158479.f	ENSGT00940000157641.l	ENSGT00940000159414.f.a #18	ENSGT00940000159426.u.b #17	ENSGT01030000234556.a.b.a.g	ENSGT00940000163875.a.b.b.b	ENSGT00390000009554.h	ENSGT01100000263505.b.b.b.b.a	ENSGT01090000260030.a.b.a.b.b.b.c.b	ENSGT00990000203615.b.b.a	ENSGT00940000157126.f.c	ENSGT00940000164937.a.b.c	ENSGT00940000156649.c.b.f
Coho salmon	MODERN SPECIES	26	TBCEL (ENSOKIG00005010538)	ENSOKIG00005010556	ENSOKIG00005010598	TIPRL (ENSOKIG00005010840)	nrgna (ENSOKIG00005010847)	HEPACAM (ENSOKIG00005010854)	slc37a2 (ENSOKIG00005010987)	ENSOKIG00005012916	OAF (ENSOKIG00005012924)	pou2f3 (ENSOKIG00005012930)	ARHGEF12 (ENSOKIG00005012991)	ENSOKIG00005013271	foxr1 (ENSOKIG00005013275)	ENSOKIG00005013284	ncf1 (ENSOKIG00005013312) #20	rcc1l (ENSOKIG00005013411) #22	ENSOKIG00005013458	castor2 (ENSOKIG00005013467) #23	DOC2B (ENSOKIG00005013518)	ENSOKIG00005030240	tmem132e (ENSOKIG00005030279)	dtx2 (ENSOKIG00005030341)	ENSOKIG00005030379 #18	CLIP2 (ENSOKIG00005030488) #17	ENSOKIG00005030582	EMSY (ENSOKIG00005030646)	ENSOKIG00005030735	kcnj1b (ENSOKIG00005030739)	ENSOKIG00005030746	KIRREL3 (ENSOKIG00005030794)	ENSOKIG00005031124
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	33	TECTA (ENSOTSG00005046465)	TBCEL (ENSOTSG00005046466)	ENSOTSG00005046467	ENSOTSG00005046468	tiprl (ENSOTSG00005046469)	nrgna (ENSOTSG00005046470)	HEPACAM (ENSOTSG00005046471)	slc37a2 (ENSOTSG00005046472)	ENSOTSG00005046493	OAF (ENSOTSG00005046494)	pou2f3 (ENSOTSG00005030522)	ARHGEF12 (ENSOTSG00005030527)	foxr1 (ENSOTSG00005030528)	ENSOTSG00005030529	ncf1 (ENSOTSG00005030531) #20	rcc1l (ENSOTSG00005030557) #22	castor2 (ENSOTSG00005030694) #23	ENSOTSG00005030719	tmem132e (ENSOTSG00005030721)	dtx2 (ENSOTSG00005030722)	GTF2IRD1 (ENSOTSG00005030723) #18	CLIP2 (ENSOTSG00005030726) #17	mpzl1l (ENSOTSG00005030727)	ENSOTSG00005030728	emsy (ENSOTSG00005030734)	ENSOTSG00005030767	ENSOTSG00005030770	kcnj1b (ENSOTSG00005030771)	KIRREL3 (ENSOTSG00005030780)	ENSOTSG00005031705	GRAMD1B (ENSOTSG00005031750)
Chinook salmon	MODERN SPECIES	33	TECTA (ENSOTSG00005011743)	TBCEL (ENSOTSG00005011746)	ENSOTSG00005011750	ENSOTSG00005011752	tiprl (ENSOTSG00005011754)	nrgna (ENSOTSG00005011755)	HEPACAM (ENSOTSG00005011758)	slc37a2 (ENSOTSG00005011784)	ENSOTSG00005014143	OAF (ENSOTSG00005014146)	pou2f3 (ENSOTSG00005014149)	ARHGEF12 (ENSOTSG00005014167)	foxr1 (ENSOTSG00005014175)	ENSOTSG00005014176	ncf1 (ENSOTSG00005014179) #20	rcc1l (ENSOTSG00005014190) #22	castor2 (ENSOTSG00005014218) #23	ENSOTSG00005014224	tmem132e (ENSOTSG00005014226)	dtx2 (ENSOTSG00005014227)	ENSOTSG00005014228 #18	CLIP2 (ENSOTSG00005014233) #17	mpzl1l (ENSOTSG00005014236)	ENSOTSG00005014238	emsy (ENSOTSG00005014240)	ENSOTSG00005014290	ENSOTSG00005014291	kcnj1b (ENSOTSG00005014292)	KIRREL3 (ENSOTSG00005014293)	ENSOTSG00005016426	GRAMD1B (ENSOTSG00005016474)
Salmo	ANCESTRAL SPECIES	44	ENSGT00940000155545.b.e	ENSGT00950000183155.a.a.a.b.d	ENSGT00530000063405.b.f.f	ENSGT00940000161847.b.a.e.a.b.a.a	ENSGT00950000183127.c.b.d.a.a.b.j	ENSGT00390000006659.eb	ENSGT00440000039324.d	ENSGT01100000263551.a.a.d	ENSGT00940000158657.h	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b	ENSGT00390000012008.a.d	ENSGT00940000157627.f	ENSGT00940000157662.g.a.a	ENSGT00940000162993	ENSGT00940000160014.c #20	ENSGT00940000157317.n #22	ENSGT00390000006208.a.j #23	ENSGT00940000156758.w.a.a.a	ENSGT00940000153883.b.j	ENSGT00940000156492.l	ENSGT00940000158479.f	ENSGT00940000157641.l	ENSGT00940000159414.f #18	ENSGT00940000159426.u.b #17	ENSGT01030000234556.a.b.a.g	ENSGT00940000163875.a.b.b.b	ENSGT00390000009554.h	ENSGT01090000260030.a.b.a.b.b.b.c.b	ENSGT00990000203615.b.b.a	ENSGT00940000157126.f.c	ENSGT00940000164937.a.b.c
River trout	MODERN SPECIES	6	TECTA (ENSSTUG00000009831)	TBCEL (ENSSTUG00000009796)	ENSSTUG00000009784	ENSSTUG00000009777	tiprl (ENSSTUG00000009775)	nrgna (ENSSTUG00000009773)	HEPACAM (ENSSTUG00000009770)	slc37a2 (ENSSTUG00000008490)	ENSSTUG00000008452	OAF (ENSSTUG00000008445)	pou2f3 (ENSSTUG00000008413)	ARHGEF12 (ENSSTUG00000007969)	foxr1 (ENSSTUG00000007945)	ENSSTUG00000007942	ncf1 (ENSSTUG00000007926) #20	rcc1l (ENSSTUG00000007903) #22	castor2 (ENSSTUG00000007893) #23	ENSSTUG00000007845	tmem248 (ENSSTUG00000007811)	ENSSTUG00000007797	tmem132e (ENSSTUG00000007768)	ENSSTUG00000007756	dtx2 (ENSSTUG00000007747)	GTF2IRD1 (ENSSTUG00000007697) #18	CLIP2 (ENSSTUG00000007443) #17	mpzl1l (ENSSTUG00000007425)	ENSSTUG00000007421	emsy (ENSSTUG00000007350)	ENSSTUG00000007339	ENSSTUG00000007338	kcnj1b (ENSSTUG00000007324)
Northern pike	MODERN SPECIES	6	cry5 (ENSELUG00000018508)	riox2 (ENSELUG00000000794)	tiprl (ENSELUG00000018537)	nrgna (ENSELUG00000024670)	HEPACAM (ENSELUG00000018580)	ENSELUG00000018593	slc37a2 (ENSELUG00000018633)	OAF (ENSELUG00000018647)	pou2f3 (ENSELUG00000018667)	tlcd5b (ENSELUG00000001057)	ARHGEF12 (ENSELUG00000018877)	GRIK4 (ENSELUG00000018995)	cenatac (ENSELUG00000019020)	foxr1 (ENSELUG00000000806)	ncf1 (ENSELUG00000019064) #20	rcc1l (ENSELUG00000019073) #22	castor2 (ENSELUG00000019113) #23	DOC2B (ENSELUG00000019152)	tmem248 (ENSELUG00000019215)	rad51d (ENSELUG00000019271)	lig3 (ENSELUG00000019357)	ENSELUG00000002978	tmem132e (ENSELUG00000019392)	ENSELUG00000026555	dtx2 (ENSELUG00000019417)	GTF2IRD1 (ENSELUG00000000843) #18	CLIP2 (ENSELUG00000019573) #17	ENSELUG00000027074	rasa4 (ENSELUG00000000863)	mpzl1l (ENSELUG00000019761)	ENSELUG00000026645
Otomorpha	ANCESTRAL SPECIES	245					ENSGT00440000037341.b.b	ENSGT00940000154849.a	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000173997	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160149	ENSGT00940000153392.b.b	ENSGT00390000005003	ENSGT00950000183012.B.a	ENSGT00390000015063
Otophysi	ANCESTRAL SPECIES	27	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00500000044869.a.b	ENSGT00390000017045	ENSGT00440000037341.b.b	ENSGT00940000154849.a	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000173997	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160149	ENSGT00940000153392.b.b	ENSGT00390000005003	ENSGT00950000183012.B.a	ENSGT00390000015063
Characiphysae	ANCESTRAL SPECIES	56	ENSGT00940000175063	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00390000017045	ENSGT00440000037341.b.b	ENSGT00940000154849.a	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000173997	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160149	ENSGT00940000153392.b.b	ENSGT00390000005003	ENSGT00950000183012.B.a	ENSGT00390000015063
Channel catfish	MODERN SPECIES	20	rsph6a (ENSIPUG00000024030)	SYMPK (ENSIPUG00000024020)	HNRNPUL1 (ENSIPUG00000024012)	im:7138535 (ENSIPUG00000024006)	gas2l2 (ENSIPUG00000024002)	rasl10b (ENSIPUG00000023998)	ap2b1 (ENSIPUG00000023990)	pex12 (ENSIPUG00000023986)	orai2 (ENSIPUG00000023980)	ENSIPUG00000023979	bckdk (ENSIPUG00000023968)	lrwd1 (ENSIPUG00000023966)	alkbh4 (ENSIPUG00000023965)	polr2j (ENSIPUG00000023960)	ncf1 (ENSIPUG00000023954) #20	Wbscr16 (ENSIPUG00000023952) #22	gatsl2 (ENSIPUG00000023947) #23	DOC2B (ENSIPUG00000023936)	tmem248 (ENSIPUG00000023933)	rad51d (ENSIPUG00000023931)	lig3 (ENSIPUG00000023929)	si:dkey-111e8.4 (ENSIPUG00000023927)	ENSIPUG00000023925	ENSIPUG00000023920	ENSIPUG00000023916	ENSIPUG00000023915	ENSIPUG00000023914	ENSIPUG00000023910	ENSIPUG00000023909	ins (ENSIPUG00000023907)	tmem132e (ENSIPUG00000023899)
Characiphysae_b	ANCESTRAL SPECIES	56	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00500000044869.a.b	ENSGT00390000017045	ENSGT00440000037341.b.b	ENSGT00940000154849.a	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000173997	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160149	ENSGT00940000153392.b.b	ENSGT00390000005003	ENSGT00950000183012.B.a	ENSGT00390000015063
Characoidei	ANCESTRAL SPECIES	39	ENSGT00940000161069	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00500000044869.a.b	ENSGT00390000017045	ENSGT00440000037341.b.b	ENSGT00940000154849.a	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23
Red-bellied piranha	MODERN SPECIES	2	tmem132e (ENSPNAG00000016294)	lig3 (ENSPNAG00000016405)	rad51d (ENSPNAG00000016418)	tmem248 (ENSPNAG00000016443)	DOC2B (ENSPNAG00000016487)	SYMPK (ENSPNAG00000016505)	ap2b1 (ENSPNAG00000016516)	pex12 (ENSPNAG00000016524)	orai2 (ENSPNAG00000016537)	bckdk (ENSPNAG00000016545)	lrwd1 (ENSPNAG00000016556)	alkbh4 (ENSPNAG00000005629)	polr2j (ENSPNAG00000016595)	ncf1 (ENSPNAG00000016649) #20	ENSPNAG00000016703	rcc1l (ENSPNAG00000005877) #22	castor2 (ENSPNAG00000016806) #23	RSPH6A (ENSPNAG00000016832)	napaa (ENSPNAG00000016904)	ENSPNAG00000016953	EHD2 (ENSPNAG00000016978)	selenow1 (ENSPNAG00000016995)	AKAP10 (ENSPNAG00000017025)	ENSPNAG00000017035	ENSPNAG00000017045	zgc:85789 (ENSPNAG00000017098)	ENSPNAG00000017100	aspa (ENSPNAG00000017112)	ENSPNAG00000017122	ABR (ENSPNAG00000017401)	ENSPNAG00000017440
Mexicana tetra	MODERN SPECIES	18	RSPH6A (ENSAMXG00000013707)	SYMPK (ENSAMXG00000013677)	HNRNPUL1 (ENSAMXG00000013644)	im:7138535 (ENSAMXG00000042035)	ENSAMXG00000042764	ENSAMXG00000041735	RASL10B (ENSAMXG00000040751)	ap2b1 (ENSAMXG00000013533)	pex12 (ENSAMXG00000043916)	orai2 (ENSAMXG00000007568)	bckdk (ENSAMXG00000032682)	lrwd1 (ENSAMXG00000007532)	alkbh4 (ENSAMXG00000038965)	polr2j (ENSAMXG00000007517)	ncf1 (ENSAMXG00000007506) #20	rcc1l (ENSAMXG00000007501) #22	castor2 (ENSAMXG00000007497) #23	ENSAMXG00000040724	DOC2B (ENSAMXG00000007495)	LTBP3 (ENSAMXG00000001998)	SPTBN2 (ENSAMXG00000001980)	cdc42ep2 (ENSAMXG00000001976)	dpf2 (ENSAMXG00000001974)	ENSAMXG00000026077	myo1ca (ENSAMXG00000001938)	ENSAMXG00000030473	epd (ENSAMXG00000030171)	panx1b (ENSAMXG00000001897)	ENSAMXG00000043570	ENSAMXG00000040082	ENSAMXG00000002249
Electric eel	MODERN SPECIES	76	napaa (ENSEEEG00000004774)	RSPH6A (ENSEEEG00000004754)	SYMPK (ENSEEEG00000004564)	HNRNPUL1 (ENSEEEG00000004548)	im:7138535 (ENSEEEG00000004546)	ENSEEEG00000004545	RASL10B (ENSEEEG00000004544)	ap2b1 (ENSEEEG00000004531)	pex12 (ENSEEEG00000004526)	orai2 (ENSEEEG00000004524)	bckdk (ENSEEEG00000004484)	lrwd1 (ENSEEEG00000004478)	alkbh4 (ENSEEEG00000004476)	polr2j (ENSEEEG00000004474)	ncf1 (ENSEEEG00000004471) #20	rcc1l (ENSEEEG00000004464) #22	castor2 (ENSEEEG00000004463) #23	ENSEEEG00000004457	DOC2B (ENSEEEG00000004454)	ENSEEEG00000004452	tmem248 (ENSEEEG00000004451)	rad51d (ENSEEEG00000004450)	lig3 (ENSEEEG00000004349)	tmem132e (ENSEEEG00000004342)	ENSEEEG00000004341	ENSEEEG00000004321	pcsk1 (ENSEEEG00000004313)	ENSEEEG00000004298	cd8a (ENSEEEG00000004294)	ENSEEEG00000004292	ENSEEEG00000004283
Cyprinoidei	ANCESTRAL SPECIES	37	ENSGT00940000175063	ENSGT00940000160330	ENSGT00940000158431.a.a.a.a.b.a.c.b	ENSGT00500000044869.a.b	ENSGT00390000017045	ENSGT00940000154849.a	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000173997.a	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160149	ENSGT00940000153392.b.b	ENSGT00390000005003	ENSGT00950000183012.B.a	ENSGT00390000015063
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	162	ENSGT00940000158431.a.a.a.a.b.a.c.b.e	ENSGT00390000005826.a.a.l.b	ENSGT00500000044869.a.b.r	ENSGT00390000017045.n	ENSGT00940000157823.jb.b	ENSGT00440000037341.b.b.c	ENSGT00940000154849.a.e	ENSGT00940000160764.c	ENSGT00940000155206.n	ENSGT00950000184414	ENSGT00390000016209	ENSGT00390000015354.c.b.b.s	ENSGT01030000234646.A.d	ENSGT00550000074975.a	ENSGT00940000160014.a #20	ENSGT00940000157317.o #22	ENSGT00390000006208.a.h #23	ENSGT00940000164249.b.a.b.a.a.k.b.a.b	ENSGT00940000156758.ab	ENSGT00940000153883.b.h	ENSGT00940000159095.j	ENSGT00940000156492.j	ENSGT00940000158479.c	ENSGT00940000157641.n	ENSGT00940000159414.c.a #18	ENSGT00940000159426.n #17	ENSGT00940000160149.j	ENSGT00940000153392.b.b	ENSGT00390000005003.e	ENSGT00950000183012.B.a.f	ENSGT00390000015063.c
Goldfish	MODERN SPECIES	23	ENSCARG00000016727	napaa (ENSCARG00000016732)	HNRNPUL1 (ENSCARG00000016799)	im:7138535 (ENSCARG00000017729)	ENSCARG00000017753	RASL10B (ENSCARG00000017758)	ap2b1 (ENSCARG00000017782)	ENSCARG00000017823	pex12 (ENSCARG00000017825)	orai2 (ENSCARG00000017831)	bckdk (ENSCARG00000017894)	ENSCARG00000018095	ENSCARG00000018101	alkbh4 (ENSCARG00000018109)	ncf1 (ENSCARG00000018119) #20	rcc1l (ENSCARG00000018169) #22	castor2 (ENSCARG00000018235) #23	ENSCARG00000018267	ENSCARG00000018280	DOC2B (ENSCARG00000018302)	ENSCARG00000018339	tmem248 (ENSCARG00000018347)	rad51d (ENSCARG00000018365)	lig3 (ENSCARG00000018437)	tmem132e (ENSCARG00000018627)	dtx2 (ENSCARG00000018646)	GTF2IRD1 (ENSCARG00000018662) #18	CLIP2 (ENSCARG00000018706) #17	rasa4 (ENSCARG00000019795)	prkrip1 (ENSCARG00000020510)	ENSCARG00000020518
Cyprininae_a	ANCESTRAL SPECIES		ENSGT00940000158431.a.a.a.a.b.a.c.b.e	ENSGT00390000005826.a.a.l.b	ENSGT00500000044869.a.b.r	ENSGT00390000017045.n	ENSGT00940000157823.jb.b	ENSGT00440000037341.b.b.c	ENSGT00940000154849.a.e	ENSGT00940000160764.c	ENSGT00940000155206.n	ENSGT00950000184414	ENSGT00390000016209.j	ENSGT00390000015354.c.b.b.s	ENSGT01030000234646.A.d	ENSGT00550000074975.a	ENSGT00940000160014.a #20	ENSGT00940000157317.o #22	ENSGT00390000006208.a.h #23	ENSGT00940000164249.b.a.b.a.a.k.b.a.b	ENSGT00940000156758.ab	ENSGT00940000153883.b.h	ENSGT00940000159095.j	ENSGT00940000156492.j	ENSGT00940000158479.c	ENSGT00940000157641.n	ENSGT00940000159414.c.a #18	ENSGT00940000159426.n #17	ENSGT00940000160149.j	ENSGT00940000153392.b.b.i	ENSGT00390000005003.e	ENSGT00950000183012.B.a.f	ENSGT00390000015063.c
Common carp reference	MODERN SPECIES	15	ENSCCRG00000071080	ENSCCRG00000075038	ENSCCRG00000014517	ENSCCRG00000015486	ENSCCRG00000073075	ENSCCRG00000058460	ENSCCRG00000082263	ENSCCRG00000050518	ap2b1 (ENSCCRG00000050537)	ENSCCRG00000071680	orai2 (ENSCCRG00000071195)	bckdk (ENSCCRG00000055540)	alkbh4 (ENSCCRG00000024113)	polr2j (ENSCCRG00000065810)	ncf1 (ENSCCRG00000024131) #20	rcc1l (ENSCCRG00000025141) #22	castor2 (ENSCCRG00000061193) #23	ENSCCRG00000063378	ENSCCRG00000074614	ENSCCRG00000062611	ENSCCRG00000078764	ENSCCRG00000066524	tmem248 (ENSCCRG00000045259)	rad51d (ENSCCRG00000007852)	lig3 (ENSCCRG00000053845)	tmem132e (ENSCCRG00000082774)	ENSCCRG00000035491	ENSCCRG00000069812	dtx2 (ENSCCRG00000031438)	ENSCCRG00000028198 #18	ENSCCRG00000026469 #17
Golden-line barbel	MODERN SPECIES	202	ENSSGRG00000005050	SYMPK (ENSSGRG00000005045)	ENSSGRG00000005039	HNRNPUL1 (ENSSGRG00000005034)	im:7138535 (ENSSGRG00000005033)	ENSSGRG00000005031	RASL10B (ENSSGRG00000005030)	ap2b1 (ENSSGRG00000001549)	ENSSGRG00000001477	pex12 (ENSSGRG00000001468)	orai2 (ENSSGRG00000001461)	bckdk (ENSSGRG00000001457)	lrwd1 (ENSSGRG00000001451)	polr2j (ENSSGRG00000001376)	ncf1 (ENSSGRG00000001171) #20	rcc1l (ENSSGRG00000050626) #22	castor2 (ENSSGRG00000050551) #23	ENSSGRG00000050545	DOC2B (ENSSGRG00000050542)
Cyprininae	ANCESTRAL SPECIES	21	ENSGT00390000005826.a.a.l.a	ENSGT00500000044869.a.b.q	ENSGT00390000017045.m	ENSGT00950000182946.lb.a.f	ENSGT00940000157823.jb.a	ENSGT00440000037341.b.b.d	ENSGT00940000154849.a.f	ENSGT00940000160764.d	ENSGT00940000155206.m	ENSGT00390000015354.c.b.b.t	ENSGT01030000234646.A.c	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975.b	ENSGT00940000160014.b #20	ENSGT00940000157317.p #22	ENSGT00390000006208.a.g #23	ENSGT00940000156758.`b.a.b	ENSGT00940000173997.a	ENSGT00940000156758.`b.a.a.b	ENSGT00940000153883.b.g	ENSGT00940000159095.i	ENSGT00940000156492.i	ENSGT00940000158479.d	ENSGT00940000157641.m	ENSGT00940000159414.c.b #18	ENSGT00940000159426.m #17	ENSGT00940000160149.i	ENSGT00390000005003.f	ENSGT00950000183012.B.a.e	ENSGT00390000015063.d
Cyprininae_a	ANCESTRAL SPECIES	75	ENSGT00500000044869.a.b.q	ENSGT00390000017045.m	ENSGT00950000182946.lb.a.f.a	ENSGT00940000157823.jb.a	ENSGT00440000037341.b.b.d	ENSGT00940000154849.a.f	ENSGT00940000160764.d	ENSGT00940000155206.m	ENSGT00390000016209.i	ENSGT00390000015354.c.b.b.t	ENSGT01030000234646.A.c	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975.b	ENSGT00940000160014.b #20	ENSGT00940000157317.p #22	ENSGT00390000006208.a.g #23	ENSGT00940000156758.`b.a.b	ENSGT00940000173997.a	ENSGT00940000156758.`b.a.a.b	ENSGT00940000153883.b.g	ENSGT00940000159095.i.b	ENSGT00940000156492.i	ENSGT00940000158479.d	ENSGT00940000157641.m	ENSGT00940000159414.c.b #18	ENSGT00940000159426.m #17	ENSGT00940000160149.i	ENSGT00940000153392.b.b.j	ENSGT00390000005003.f	ENSGT00950000183012.B.a.e
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	94	napaa (ENSSGRG00000031417)	ENSSGRG00000031739	SYMPK (ENSSGRG00000031746)	ENSSGRG00000032809	im:7138535 (ENSSGRG00000032811)	ENSSGRG00000032812	RASL10B (ENSSGRG00000032813)	ap2b1 (ENSSGRG00000032854)	ENSSGRG00000037878	pex12 (ENSSGRG00000037879)	orai2 (ENSSGRG00000037881)	bckdk (ENSSGRG00000037882)	lrwd1 (ENSSGRG00000037883)	alkbh4 (ENSSGRG00000037884)	polr2j (ENSSGRG00000037887)	rcc1l (ENSSGRG00000037893) #22	castor2 (ENSSGRG00000037898) #23	ENSSGRG00000037911	tmem248 (ENSSGRG00000037975)	rad51d (ENSSGRG00000037976)	lig3 (ENSSGRG00000038039)
Golden-line barbel	MODERN SPECIES	13			elapor2a (ENSSGRG00000028230)	tmem243a (ENSSGRG00000028231)	si:dkey-5i3.5 (ENSSGRG00000028233)	ENSSGRG00000028234	impdh1a (ENSSGRG00000028240)	frmd4a (ENSSGRG00000028273)	BEND7 (ENSSGRG00000028275)	sephs1 (ENSSGRG00000028276)	sephs1 (ENSSGRG00000028285)	cpt1b (ENSSGRG00000028301)	chkb (ENSSGRG00000032233)	MAPK8IP2 (ENSSGRG00000032234)	arsa (ENSSGRG00000032236)	ENSSGRG00000032251 #22	ENSSGRG00000032253	rabl2 (ENSSGRG00000032255)	trim35-30 (ENSSGRG00000032278)	ENSSGRG00000032279	odf3b (ENSSGRG00000032280)	zgc:77752 (ENSSGRG00000032282)	ARF5 (ENSSGRG00000032285)	si:dkey-30c15.2 (ENSSGRG00000032475)	ENSSGRG00000032476	si:dkey-238c7.16 (ENSSGRG00000032478)	terb1 (ENSSGRG00000032481)	pdp2 (ENSSGRG00000032482)	ENSSGRG00000032483	ENSSGRG00000032488	si:dkey-30c15.13 (ENSSGRG00000032529)
Common carp reference	MODERN SPECIES	7	ENSCCRG00000068304	napaa (ENSCCRG00000015245)	ENSCCRG00000015311	ENSCCRG00000015495	ENSCCRG00000054409	im:7138535 (ENSCCRG00000021102)	ENSCCRG00000015509	RASL10B (ENSCCRG00000015525)	ap2b1 (ENSCCRG00000042700)	pex12 (ENSCCRG00000044463)	orai2 (ENSCCRG00000039011)	bckdk (ENSCCRG00000067181)	lrwd1 (ENSCCRG00000077882)	polr2j (ENSCCRG00000044891)	ncf1 (ENSCCRG00000044938) #20	rcc1l (ENSCCRG00000044998) #22	castor2 (ENSCCRG00000065176) #23	ENSCCRG00000025155	ENSCCRG00000058946	tmem248 (ENSCCRG00000028402)	rad51d (ENSCCRG00000070560)	lig3 (ENSCCRG00000077154)	tmem132e (ENSCCRG00000046437)	ENSCCRG00000074686	ENSCCRG00000068351	ENSCCRG00000065084	dtx2 (ENSCCRG00000028202)	ENSCCRG00000075577 #18	ENSCCRG00000026679 #17	ENSCCRG00000068514	rasa4 (ENSCCRG00000026526)
Zebrafish	MODERN SPECIES	20	im:7138535 (ENSDARG00000057245)	ENSDARG00000073860	RASL10B (ENSDARG00000109436)	ap2b1 (ENSDARG00000035152)	drl (ENSDARG00000078004)	drll.1 (ENSDARG00000035151)	drll.2 (ENSDARG00000035150)	drll.3 (ENSDARG00000095635)	pex12 (ENSDARG00000035149)	orai2 (ENSDARG00000035148)	bckdk (ENSDARG00000016904)	lrwd1 (ENSDARG00000035147)	alkbh4 (ENSDARG00000052247)	polr2j (ENSDARG00000035146)	ncf1 (ENSDARG00000033735) #20	rcc1l (ENSDARG00000059583) #22	castor2 (ENSDARG00000018985) #23	ENSDARG00000093734	ENSDARG00000044290	DOC2B (ENSDARG00000088293)	tmem248 (ENSDARG00000018825)	rad51d (ENSDARG00000026400)	lig3 (ENSDARG00000052553)	tmem132e (ENSDARG00000090830)	ENSDARG00000094771	dtx2 (ENSDARG00000032933)	GTF2IRD1 (ENSDARG00000022203) #18	CLIP2 (ENSDARG00000059596) #17	rasa4 (ENSDARG00000029372)	upk3b (ENSDARG00000092872)	prkrip1 (ENSDARG00000033126)
Clupeiformes	ANCESTRAL SPECIES	134	ENSGT00940000162993	ENSGT00390000007799	ENSGT00940000157662.g.a	ENSGT00390000008162.e	ENSGT00440000037341.b.b	ENSGT00940000154849.a	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00550000074975	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000173997	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000158479	ENSGT00940000157641.p	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160149	ENSGT00940000153392.b.b	ENSGT00390000005003	ENSGT00950000183012.B.a	ENSGT00530000063743.b
Atlantic herring	MODERN SPECIES	24	zgc:194948 (ENSCHAG00000005918)	cenatac (ENSCHAG00000005957)	ENSCHAG00000006046	tlcd5b (ENSCHAG00000008287)	HNRNPUL1 (ENSCHAG00000008313)	im:7138535 (ENSCHAG00000009361)	ENSCHAG00000009415	RASL10B (ENSCHAG00000009444)	ap2b1 (ENSCHAG00000009463)	pex12 (ENSCHAG00000009753)	orai2 (ENSCHAG00000009764)	bckdk (ENSCHAG00000009844)	lrwd1 (ENSCHAG00000009895)	alkbh4 (ENSCHAG00000010050)	ncf1 (ENSCHAG00000010068) #20	rcc1l (ENSCHAG00000010179) #22	castor2 (ENSCHAG00000010205) #23	ENSCHAG00000010241	DOC2B (ENSCHAG00000010284)	tmem248 (ENSCHAG00000010393)	rad51d (ENSCHAG00000010433)	lig3 (ENSCHAG00000010657)	tmem132e (ENSCHAG00000012267)	dtx2 (ENSCHAG00000012292)	GTF2IRD1 (ENSCHAG00000012321) #18	CLIP2 (ENSCHAG00000012368) #17	rasa4 (ENSCHAG00000013042)	upk3b (ENSCHAG00000013408)	prkrip1 (ENSCHAG00000013413)	ENSCHAG00000013417	napaa (ENSCHAG00000013445)
Osteoglossiformes	ANCESTRAL SPECIES	27	ENSGT00940000156805	ENSGT01030000235478	ENSGT00390000009588	ENSGT00390000016686	ENSGT00940000154849.a	ENSGT01060000249314	ENSGT00940000160764	ENSGT00940000155206	ENSGT00390000016209	ENSGT00390000015354.c.b.b	ENSGT01030000234646.A	ENSGT00940000154248.b	ENSGT00390000006344	ENSGT00940000164393	ENSGT00940000160014 #20	ENSGT00940000157317 #22	ENSGT00390000006208.a #23	ENSGT00940000156758	ENSGT00940000153883.b	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000158479	ENSGT00940000157641	ENSGT00940000159414 #18	ENSGT00940000159426 #17	ENSGT00940000160149	ENSGT00940000153392.b.b	ENSGT00390000005003	ENSGT00950000183012.B.a	ENSGT00390000015063	ENSGT00530000063743.b
P. kingsleyae	MODERN SPECIES	172	ska2 (ENSPKIG00000013504)	mdh2 (ENSPKIG00000013451)	ENSPKIG00000013428	ENSPKIG00000013410	ENSPKIG00000013395	RASL10B (ENSPKIG00000013373)	ap2b1 (ENSPKIG00000013230)	pex12 (ENSPKIG00000013143)	orai2 (ENSPKIG00000013121)	bckdk (ENSPKIG00000013099)	lrwd1 (ENSPKIG00000013065)	alkbh4 (ENSPKIG00000013042)	ENSPKIG00000013014	ncf1 (ENSPKIG00000012970) #20	ENSPKIG00000012950	rcc1l (ENSPKIG00000012917) #22	castor2 (ENSPKIG00000012878) #23	ENSPKIG00000012848	DOC2B (ENSPKIG00000012781)
Asian bonytongue	MODERN SPECIES	17	ppm1e (ENSSFOG00015003642)	rad51c (ENSSFOG00015031176)	ska2 (ENSSFOG00015003616)	mdh2 (ENSSFOG00015003601)	ENSSFOG00015003592	ENSSFOG00015032719	RASL10B (ENSSFOG00015003561)	ap2b1 (ENSSFOG00015003461)	pex12 (ENSSFOG00015003439)	orai2 (ENSSFOG00015028747)	bckdk (ENSSFOG00015003411)	lrwd1 (ENSSFOG00015003398)	alkbh4 (ENSSFOG00015003376)	ENSSFOG00015027446	ncf1 (ENSSFOG00015003339) #20	rcc1l (ENSSFOG00015003321) #22	castor2 (ENSSFOG00015003277) #23	DOC2B (ENSSFOG00015003225)	tmem248 (ENSSFOG00015029199)	rad51d (ENSSFOG00015003182)	lig3 (ENSSFOG00015003139)	tmem132e (ENSSFOG00015003128)	dtx2 (ENSSFOG00015025780)	GTF2IRD1 (ENSSFOG00015003076) #18	CLIP2 (ENSSFOG00015002997) #17	rasa4 (ENSSFOG00015002894)	upk3b (ENSSFOG00015027271)	prkrip1 (ENSSFOG00015002847)	ENSSFOG00015002836	nup88 (ENSSFOG00015002786)	rabep1 (ENSSFOG00015002695)
Spotted gar	DUPLICATION
Spotted gar	MODERN SPECIES	66																rcc1l (ENSLOCG00000000295) #22
Spotted gar	MODERN SPECIES	661	ENSLOCG00000001631	porb (ENSLOCG00000001640)	tmem120ab (ENSLOCG00000001667)	styxl1 (ENSLOCG00000001692)	mdh2 (ENSLOCG00000001699)	ENSLOCG00000001720	RASL10B (ENSLOCG00000001742)	ap2b1 (ENSLOCG00000001756)	pex12 (ENSLOCG00000001797)	orai2 (ENSLOCG00000001815)	bckdk (ENSLOCG00000001821)	lrwd1 (ENSLOCG00000001842)	alkbh4 (ENSLOCG00000001872)	polr2j (ENSLOCG00000001885)	ncf1 (ENSLOCG00000001899) #20	rcc1l (ENSLOCG00000001933) #22	castor2 (ENSLOCG00000001947) #23	ENSLOCG00000001977	ENSLOCG00000001991	DOC2B (ENSLOCG00000002007)	ENSLOCG00000002023	tmem248 (ENSLOCG00000002034)	rad51d (ENSLOCG00000002045)	ENSLOCG00000002059	lig3 (ENSLOCG00000002087)	tmem132e (ENSLOCG00000002145)	ENSLOCG00000017870	CLIP2 (ENSLOCG00000002159) #17	GTF2IRD1 (ENSLOCG00000002184) #18	ENSLOCG00000002222 #19	dtx2 (ENSLOCG00000002231)
Reedfish	MODERN SPECIES	16	mks1 (ENSECRG00000013109)	bcl7bb (ENSECRG00000013080)	tbl2 (ENSECRG00000013055)	nsun5 (ENSECRG00000013037)	ENSECRG00000012979	hip1 (ENSECRG00000012886)	ENSECRG00000012836	eif4h (ENSECRG00000012803) #13	mybbp1a (ENSECRG00000012754)	SPNS2 (ENSECRG00000012702)	ube2g1a (ENSECRG00000012686)	ankfy1 (ENSECRG00000012614)	ENSECRG00000012575	styxl1 (ENSECRG00000012550)	mdh2 (ENSECRG00000012525)	rcc1l (ENSECRG00000012499) #22	castor2 (ENSECRG00000012477) #23	ENSECRG00000012418	ENSECRG00000012388	ENSECRG00000012377	ENSECRG00000012103	cpdb (ENSECRG00000011986)	gosr1 (ENSECRG00000011948)	TRARG1 (ENSECRG00000011924)	AIPL1 (ENSECRG00000011868)	ENSECRG00000011841	exo5 (ENSECRG00000011835)	ENSECRG00000011826	vps53 (ENSECRG00000011701)	aifm4 (ENSECRG00000011643)	tlcd2 (ENSECRG00000011625)
Elephant shark	MODERN SPECIES	1699							SH2B2 (ENSCMIG00000011620)	cux1b (ENSCMIG00000011685)	ENSCMIG00000012076	ENSCMIG00000012087	ENSCMIG00000012091	ENSCMIG00000012094	ift22 (ENSCMIG00000012096)	mis12 (ENSCMIG00000012107)	DERL2 (ENSCMIG00000012108)	rcc1l (ENSCMIG00000012118) #22	ENSCMIG00000012149	chchd2 (ENSCMIG00000012159)	phkg1b (ENSCMIG00000012167)	ENSCMIG00000012201	cct6a (ENSCMIG00000012239)	psph (ENSCMIG00000012349)	NIPSNAP2 (ENSCMIG00000012362)	mrps17 (ENSCMIG00000012427)	nf2b (ENSCMIG00000012439)	sbds (ENSCMIG00000012449)	tyw1 (ENSCMIG00000012452)	CALN1 (ENSCMIG00000012457)	GALNT17 (ENSCMIG00000012471)	AUTS2 (ENSCMIG00000012510)	ENSCMIG00000012564
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000157317 #22
Lamprey	MODERN SPECIES	3164															smarcb1b (ENSPMAG00000005635)	rcc1l (ENSPMAG00000005594) #22
Ciona	ANCESTRAL SPECIES																	ENSGT00940000157317 #22
Ciona intestinalis	MODERN SPECIES	122														ENSCING00000022356	ENSCING00000017420	ENSCING00000000787 #22	ENSCING00000021377	ENSCING00000015948	ENSCING00000013386	ENSCING00000017419	ENSCING00000016512	ENSCING00000017416	ENSCING00000017415	ENSCING00000017414	ENSCING00000018611	ENSCING00000017413	ENSCING00000019926	ENSCING00000018929	ENSCING00000021283	ENSCING00000023633	ENSCING00000001021