Sarcopterygii	ANCESTRAL SPECIES	17	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000167622	ENSGT00940000162727	ENSGT00940000163466	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000165852	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00940000163785.b	ENSGT00390000007688 #29	ENSGT00530000064273.a.b	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Tetrapoda	ANCESTRAL SPECIES	8	ENSGT00940000160703	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163111.a.b.b
Amniota	ANCESTRAL SPECIES	9	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT00940000165410	ENSGT00940000153231.B #33	ENSGT01100000263525.a.b.b #32	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788
Mammalia	ANCESTRAL SPECIES	5	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT00940000165410	ENSGT00940000153231.B #33	ENSGT01100000263525.a.b.b #32	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Theria	ANCESTRAL SPECIES	3	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT00940000165410	ENSGT00940000153231.B #33	ENSGT01100000263525.a.b.b #32	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788
Eutheria	ANCESTRAL SPECIES		ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT00940000165410	ENSGT00940000153231.B #33	ENSGT01100000263525.a.b.b #32	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Glires	ANCESTRAL SPECIES		ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Rodentia	ANCESTRAL SPECIES		ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Rodentia_A	ANCESTRAL SPECIES		ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416.p	ENSGT00940000160416.o	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416.p	ENSGT00940000160416.o	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00940000168548 #12	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36	ENSGT00940000161169 #37
Eurasian red squirrel	MODERN SPECIES		CLCA2 (ENSSVLG00005001063) #7	ODF2L (ENSSVLG00005001026) #8	ENSSVLG00005000969 #9	ENSSVLG00005000957 #10	COL24A1 (ENSSVLG00005000916) #11	ENSSVLG00005000886 #12	ZNHIT6 (ENSSVLG00005000846) #13	ENSSVLG00005000810 #14	CCN1 (ENSSVLG00005000795) #15	ENSSVLG00005000783 #16	ENSSVLG00005000769 #17	DDAH1 (ENSSVLG00005000747) #18	ENSSVLG00005000713 #19	ENSSVLG00005000702 #20	BCL10 (ENSSVLG00005000684) #21	C1orf52 (ENSSVLG00005000674) #22	GABARAP (ENSSVLG00005000657) #23	SYDE2 (ENSSVLG00005000635) #24	DNAI3 (ENSSVLG00005000535) #25	MCOLN3 (ENSSVLG00005000388) #26	MCOLN2 (ENSSVLG00005000331) #27	LPAR3 (ENSSVLG00005000296) #28	SSX2IP (ENSSVLG00005000274) #29	CTBS (ENSSVLG00005000249) #30	SPATA1 (ENSSVLG00005000234) #31	ENSSVLG00005000219 #32	RPF1 (ENSSVLG00005000206) #33	DNASE2B (ENSSVLG00005000189) #34	ENSSVLG00005000176 #35	SAMD13 (ENSSVLG00005000161) #36	PRKACB (ENSSVLG00005023190) #37
Marmotini	ANCESTRAL SPECIES		ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416.p	ENSGT00940000160416.o.a	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00940000168548 #12	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000003718.d.kd.b	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36	ENSGT00940000161169 #37
Marmotini_b	DUPLICATION
Marmotini_b	ANCESTRAL SPECIES	166						ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000003718.d.kd.b	ENSGT00390000017398.i #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36	ENSGT00940000161169 #37
Arctic ground squirrel	MODERN SPECIES	330						CLCA1 (ENSUPAG00010012033)	CLCA2 (ENSUPAG00010011985) #7	ODF2L (ENSUPAG00010011819) #8	ENSUPAG00010011804 #11	ZNHIT6 (ENSUPAG00010011778) #13	CCN1 (ENSUPAG00010011774) #15	ENSUPAG00010011773 #16	DDAH1 (ENSUPAG00010011761) #18	BCL10 (ENSUPAG00010011755) #21	ENSUPAG00010011746	ENSUPAG00010011740 #22	SYDE2 (ENSUPAG00010011732) #24	DNAI3 (ENSUPAG00010011711) #25	MCOLN3 (ENSUPAG00010011700) #26	MCOLN2 (ENSUPAG00010011678) #27	LPAR3 (ENSUPAG00010011664) #28	SSX2IP (ENSUPAG00010011627) #29	CTBS (ENSUPAG00010011611) #30	ENSUPAG00010011599 #31	ENSUPAG00010011592 ##32	RPF1 (ENSUPAG00010011580) #33	DNASE2B (ENSUPAG00010011561) #34	ENSUPAG00010011547 #35	ENSUPAG00010011541	SAMD13 (ENSUPAG00010011529) #36	PRKACB (ENSUPAG00010011454) #37
Squirrel	MODERN SPECIES	208										ENSSTOG00000031983 #11	ZNHIT6 (ENSSTOG00000024455) #13	CCN1 (ENSSTOG00000019882) #15	ENSSTOG00000031250 #16	DDAH1 (ENSSTOG00000012594) #18	BCL10 (ENSSTOG00000027214) #21	C1orf52 (ENSSTOG00000010698) #22	SYDE2 (ENSSTOG00000012586) #24	DNAI3 (ENSSTOG00000012564) #25	MCOLN3 (ENSSTOG00000011310) #26	MCOLN2 (ENSSTOG00000011302) #27	LPAR3 (ENSSTOG00000005282) #28	SSX2IP (ENSSTOG00000008644) #29	CTBS (ENSSTOG00000015319) #30	ENSSTOG00000021329 #31	ENSSTOG00000033029 #31	GNG5 (ENSSTOG00000008641) #32	RPF1 (ENSSTOG00000008635) #33	DNASE2B (ENSSTOG00000023007) #34	ENSSTOG00000022835 #35	SAMD13 (ENSSTOG00000003083) #36	PRKACB (ENSSTOG00000003074) #37
Marmotini_b	ANCESTRAL SPECIES																	ENSGT00390000017398.j #22
Arctic ground squirrel	MODERN SPECIES	173												PPEF1 (ENSUPAG00010013699)	RS1 (ENSUPAG00010013669)	CDKL5 (ENSUPAG00010013645)	SCML2 (ENSUPAG00010013630)	ENSUPAG00010013622 #22	RAI2 (ENSUPAG00010013618)	ENSUPAG00010013597	NHS (ENSUPAG00010013557)	REPS2 (ENSUPAG00010013493)	RBBP7 (ENSUPAG00010013404)	TXLNG (ENSUPAG00010013379)	SYAP1 (ENSUPAG00010013371)	ENSUPAG00010013364	S100G (ENSUPAG00010013357)	CTPS2 (ENSUPAG00010013304)	GRPR (ENSUPAG00010013272)	AP1S2 (ENSUPAG00010013242)	ZRSR2 (ENSUPAG00010013230)	ENSUPAG00010013220	CA5B (ENSUPAG00010013214)
Alpin marmot	MODERN SPECIES	96	ENSMMMG00000006883	ENSMMMG00000007100	ENSMMMG00000008525	CLCA1 (ENSMMMG00000008544)	CLCA2 (ENSMMMG00000008561) #7	ODF2L (ENSMMMG00000008590) #8	ENSMMMG00000008742	ENSMMMG00000008750 #11	ENSMMMG00000008758 #12	ZNHIT6 (ENSMMMG00000008767) #13	CCN1 (ENSMMMG00000008796) #15	ENSMMMG00000008810 #16	DDAH1 (ENSMMMG00000008813) #18	ENSMMMG00000008820 #21	ENSMMMG00000008825	C1orf52 (ENSMMMG00000008832) #22	SYDE2 (ENSMMMG00000008839) #24	DNAI3 (ENSMMMG00000008854) #25	MCOLN3 (ENSMMMG00000008888) #26	MCOLN2 (ENSMMMG00000008910) #27	LPAR3 (ENSMMMG00000008955) #28	SSX2IP (ENSMMMG00000008964) #29	CTBS (ENSMMMG00000009025) #30	ENSMMMG00000009057 #31	GNG5 (ENSMMMG00000009067) #32	RPF1 (ENSMMMG00000009079) #33	DNASE2B (ENSMMMG00000009098) #34	ENSMMMG00000009120 #35	SAMD13 (ENSMMMG00000009129) #36	ENSMMMG00000009152	ENSMMMG00000009169 #37
Hystricomorpha	ANCESTRAL SPECIES	44	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416.p	ENSGT00940000160416.o	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Naked mole-rat female	MODERN SPECIES	10	ENSHGLG00000035709	ENSHGLG00000012115	ENSHGLG00000015121	ENSHGLG00000037078	CLCA1 (ENSHGLG00000015470)	CLCA2 (ENSHGLG00000015413) #7	ENSHGLG00000010829 #8	COL24A1 (ENSHGLG00000004244) #11	ENSHGLG00000036484	ZNHIT6 (ENSHGLG00000007009) #13	CCN1 (ENSHGLG00000007980) #15	DDAH1 (ENSHGLG00000047230) #18	ENSHGLG00000033883	ENSHGLG00000041300	BCL10 (ENSHGLG00000004369) #21	C1orf52 (ENSHGLG00000004452) #22	ENSHGLG00000039413	SYDE2 (ENSHGLG00000005398) #24	ENSHGLG00000006816 #25	ENSHGLG00000047666	MCOLN3 (ENSHGLG00000009140) #26	ENSHGLG00000005122 #27	LPAR3 (ENSHGLG00000033915) #28	ENSHGLG00000035667	SSX2IP (ENSHGLG00000007408) #29	CTBS (ENSHGLG00000008383) #30	SPATA1 (ENSHGLG00000005825) #31	GNG5 (ENSHGLG00000005854) #32	RPF1 (ENSHGLG00000048402) #33	ENSHGLG00000009023 #35	DNASE2B (ENSHGLG00000048352) #34
Hystricomorpha_a	ANCESTRAL SPECIES	14	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416.o.f	ENSGT00940000160416.p	ENSGT00940000160416.o.e	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Hystricomorpha_b	ANCESTRAL SPECIES	6	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416.o.e	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000160313.k	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Degu	DUPLICATION
Degu	MODERN SPECIES	150	ENSODEG00000002911	SH3GLB1 (ENSODEG00000003003)	ENSODEG00000002661	ENSODEG00000002677	ENSODEG00000002712	ENSODEG00000002790	CLCA2 (ENSODEG00000002864) #7	ODF2L (ENSODEG00000002955) #8	ENSODEG00000003023	COL24A1 (ENSODEG00000003113) #11	ZNHIT6 (ENSODEG00000003486) #13	CCN1 (ENSODEG00000003521) #15	ENSODEG00000018975	DDAH1 (ENSODEG00000003545) #18	BCL10 (ENSODEG00000003555) #21	ENSODEG00000003582 #22	ENSODEG00000003641	SYDE2 (ENSODEG00000003681) #24	DNAI3 (ENSODEG00000003772) #25	MCOLN3 (ENSODEG00000004499) #26	MCOLN2 (ENSODEG00000004650) #27	LPAR3 (ENSODEG00000004676) #28	ENSODEG00000019111	SSX2IP (ENSODEG00000004753) #29	CTBS (ENSODEG00000005131) #30	ENSODEG00000005441 #31	ENSODEG00000002981 #31	ENSODEG00000003027 #32	ENSODEG00000003070 #33	ENSODEG00000003125	DNASE2B (ENSODEG00000003140) #34
Degu	MODERN SPECIES	46	ENSODEG00000020279	CD2AP (ENSODEG00000015575)	OPN5 (ENSODEG00000015357)	ENSODEG00000015033	ENSODEG00000014928	ANXA11 (ENSODEG00000014938)	ZCCHC24 (ENSODEG00000015281)	PPIF (ENSODEG00000015244)	ZMIZ1 (ENSODEG00000015504)	RPS24 (ENSODEG00000015382)	POLR3A (ENSODEG00000015146)	DLG5 (ENSODEG00000015060)	KCNMA1 (ENSODEG00000016449)	LRMDA (ENSODEG00000015494)	ZNF503 (ENSODEG00000015000)	ENSODEG00000014826 #22	COMTD1 (ENSODEG00000015636)	VDAC2 (ENSODEG00000014433)	SAMD8 (ENSODEG00000015010)	DUSP13 (ENSODEG00000014816)	DUSP29 (ENSODEG00000014367)	ENSODEG00000014295	ENSODEG00000020272	ENSODEG00000015430	ENSODEG00000015093	VCL (ENSODEG00000015408)	PLAU (ENSODEG00000015271)	CAMK2G (ENSODEG00000015036)	NDST2 (ENSODEG00000016187)	ZSWIM8 (ENSODEG00000015594)	CHCHD1 (ENSODEG00000013911)
Long-tailed chinchilla	MODERN SPECIES	130	ENSCLAG00000009271	ENSCLAG00000009598	ENSCLAG00000010819	ENSCLAG00000007523	CLCA1 (ENSCLAG00000008032)	CLCA2 (ENSCLAG00000004004) #7	ODF2L (ENSCLAG00000004825) #8	ENSCLAG00000006341	COL24A1 (ENSCLAG00000009364) #11	ENSCLAG00000011135	ZNHIT6 (ENSCLAG00000011251) #13	CCN1 (ENSCLAG00000015005) #15	ENSCLAG00000017789	DDAH1 (ENSCLAG00000003885) #18	BCL10 (ENSCLAG00000003932) #21	C1orf52 (ENSCLAG00000003961) #22	SYDE2 (ENSCLAG00000004038) #24	DNAI3 (ENSCLAG00000004279) #25	MCOLN3 (ENSCLAG00000004543) #26	MCOLN2 (ENSCLAG00000004888) #27	LPAR3 (ENSCLAG00000005453) #28	SSX2IP (ENSCLAG00000012846) #29	CTBS (ENSCLAG00000013866) #30	ENSCLAG00000009170 #31	ENSCLAG00000006867 #31	RPF1 (ENSCLAG00000007607) #33	ENSCLAG00000003910 #35	DNASE2B (ENSCLAG00000004420) #34	SAMD13 (ENSCLAG00000004824) #36	ENSCLAG00000005050	PRKACB (ENSCLAG00000005809) #37
Guinea pig	MODERN SPECIES	2	SELENOF (ENSCPOG00000037223)	SH3GLB1 (ENSCPOG00000015176)	ENSCPOG00000015253	ENSCPOG00000039214	ENSCPOG00000001098	ENSCPOG00000014950	CLCA1 (ENSCPOG00000014947)	CLCA2 (ENSCPOG00000014944) #7	ODF2L (ENSCPOG00000004605) #8	COL24A1 (ENSCPOG00000001259) #11	ZNHIT6 (ENSCPOG00000001258) #13	CCN1 (ENSCPOG00000010120) #15	ENSCPOG00000034357 #16	DDAH1 (ENSCPOG00000035239) #18	BCL10 (ENSCPOG00000033375) #21	C1orf52 (ENSCPOG00000011795) #22	SYDE2 (ENSCPOG00000001552) #24	DNAI3 (ENSCPOG00000001550) #25	MCOLN3 (ENSCPOG00000030466) #26	MCOLN2 (ENSCPOG00000006755) #27	LPAR3 (ENSCPOG00000035050) #28	SSX2IP (ENSCPOG00000012045) #29	CTBS (ENSCPOG00000009243) #30	ENSCPOG00000033072 #31	ENSCPOG00000019991 #31	ENSCPOG00000030942 #32	RPF1 (ENSCPOG00000014316) #33	DNASE2B (ENSCPOG00000011531) #34	ENSCPOG00000024987 #35	SAMD13 (ENSCPOG00000031933) #36	PRKACB (ENSCPOG00000036250) #37
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Muroidea	ANCESTRAL SPECIES	6	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.g.a	ENSGT00940000157555.h	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.h	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.g.a	ENSGT00940000157555.g.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892.j #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b.uc #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36	ENSGT00940000161169 #37
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.g.a	ENSGT00940000157555.g.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892.j #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b.uc #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00900000143848
Prairie vole	MODERN SPECIES	8	Selenof (ENSMOCG00000002490)	Sh3glb1 (ENSMOCG00000013092)	ENSMOCG00000000717	ENSMOCG00000005395	ENSMOCG00000016514	ENSMOCG00000009777	Clca1 (ENSMOCG00000015412)	Clca2 (ENSMOCG00000021161) #7	Odf2l (ENSMOCG00000013411) #8	Col24a1 (ENSMOCG00000010555)	Znhit6 (ENSMOCG00000011010) #13	Ccn1 (ENSMOCG00000013502) #15	ENSMOCG00000009612 #16	Ddah1 (ENSMOCG00000018589) #18	Bcl10 (ENSMOCG00000004469) #21	2410004B18Rik (ENSMOCG00000000971) #22	Syde2 (ENSMOCG00000011613) #24	Dnai3 (ENSMOCG00000004827) #25	Mcoln3 (ENSMOCG00000011948) #26	Mcoln2 (ENSMOCG00000005258) #27	Lpar3 (ENSMOCG00000012201) #28	Ssx2ip (ENSMOCG00000014448) #29	Ctbs (ENSMOCG00000020087) #30	ENSMOCG00000022893 #31	ENSMOCG00000000334 #31	ENSMOCG00000005222 #32	Rpf1 (ENSMOCG00000018274) #33	Dnase2b (ENSMOCG00000000354) #34	Uox (ENSMOCG00000016256) #35	Samd13 (ENSMOCG00000010216) #36	Prkacb (ENSMOCG00000001336) #37
Northern American deer mouse	MODERN SPECIES	19	Selenof (ENSPEMG00000020473)	Sh3glb1 (ENSPEMG00000030955)	ENSPEMG00000022101	ENSPEMG00000022445	ENSPEMG00000021736	ENSPEMG00000007919	Clca1 (ENSPEMG00000023001)	Clca2 (ENSPEMG00000021862) #7	Odf2l (ENSPEMG00000022035) #8	Col24a1 (ENSPEMG00000010634)	Znhit6 (ENSPEMG00000022716) #13	Ccn1 (ENSPEMG00000000386) #15	ENSPEMG00000031409 #16	Ddah1 (ENSPEMG00000027558) #18	Bcl10 (ENSPEMG00000026389) #21	ENSPEMG00000028265 #22	Syde2 (ENSPEMG00000022180) #24	Dnai3 (ENSPEMG00000023437) #25	Mcoln3 (ENSPEMG00000014566) #26	Mcoln2 (ENSPEMG00000015343) #27	Lpar3 (ENSPEMG00000022406) #28	Ssx2ip (ENSPEMG00000023032) #29	Ctbs (ENSPEMG00000006184) #30	Spata1 (ENSPEMG00000023282) #31	Rpf1 (ENSPEMG00000023196) #33	Dnase2b (ENSPEMG00000023363) #34	Uox (ENSPEMG00000023036) #35	ENSPEMG00000028095	4930503B20Rik (ENSPEMG00000023951)	Prkacb (ENSPEMG00000030921) #37	ENSPEMG00000024491
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.g.a	ENSGT00940000157555.g.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892.j #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b.uc #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36	ENSGT00940000161169 #37
Golden Hamster	MODERN SPECIES	735	Hs2st1 (ENSMAUG00000009309)	Selenof (ENSMAUG00000002011)	ENSMAUG00000008381	ENSMAUG00000018947	ENSMAUG00000017339	ENSMAUG00000014124	Clca1 (ENSMAUG00000020334)	Clca2 (ENSMAUG00000020634) #7	Odf2l (ENSMAUG00000001252) #8	Col24a1 (ENSMAUG00000010161)	ENSMAUG00000020898 #13	Ccn1 (ENSMAUG00000006075) #15	ENSMAUG00000017168 #16	Ddah1 (ENSMAUG00000012623) #18	ENSMAUG00000011334 #21	2410004B18Rik (ENSMAUG00000019352) #22	Syde2 (ENSMAUG00000017505) #24	Dnai3 (ENSMAUG00000005774) #25	Mcoln3 (ENSMAUG00000018992) #26	Mcoln2 (ENSMAUG00000006761) #27	Ssx2ip (ENSMAUG00000013155) #29	ENSMAUG00000008498	Spata1 (ENSMAUG00000008313) #31	ENSMAUG00000019525 ##32	Rpf1 (ENSMAUG00000006030) #33	Dnase2b (ENSMAUG00000019185) #34	Uox (ENSMAUG00000014563) #35	ENSMAUG00000019018	Prkacb (ENSMAUG00000002887) #37	ENSMAUG00000011447
Chinese hamster chok1gshd	MODERN SPECIES	219	Hs2st1 (ENSCGRG00001010979)	Selenof (ENSCGRG00001004806)	Sh3glb1 (ENSCGRG00001002284)	ENSCGRG00001022589	ENSCGRG00001018022	ENSCGRG00001017040	Clca1 (ENSCGRG00001016411)	Clca2 (ENSCGRG00001014297) #7	Odf2l (ENSCGRG00001012670) #8	Col24a1 (ENSCGRG00001021909)	Znhit6 (ENSCGRG00001018263) #13	Ccn1 (ENSCGRG00001017662) #15	ENSCGRG00001016514 #16	Ddah1 (ENSCGRG00001019335) #18	Bcl10 (ENSCGRG00001018169) #21	2410004B18Rik (ENSCGRG00001015888) #22	Syde2 (ENSCGRG00001014086) #24	ENSCGRG00001011030 #25	Mcoln3 (ENSCGRG00001004877) #26	Mcoln2 (ENSCGRG00001001707) #27	Lpar3 (ENSCGRG00001024413) #28	Ssx2ip (ENSCGRG00001019268) #29	Ctbs (ENSCGRG00001014407) #30	Spata1 (ENSCGRG00001008771) #31	ENSCGRG00001011533 #32	Rpf1 (ENSCGRG00001001189) #33	Dnase2b (ENSCGRG00001000256) #34	Uox (ENSCGRG00001021254) #35	4930503B20Rik (ENSCGRG00001018506)	Samd13 (ENSCGRG00001015430) #36	PRKACB (ENSCGRG00001022775) #37
Murinae	ANCESTRAL SPECIES	5	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.h.a	ENSGT00940000157555.h.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Mus	ANCESTRAL SPECIES	7	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.h.a	ENSGT00940000157555.h.b	ENSGT00940000160416.m	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Mus_A	ANCESTRAL SPECIES	9	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.h.a	ENSGT00940000157555.h.b	ENSGT00940000160416.m	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Mus_B	ANCESTRAL SPECIES	8	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.h.a.a	ENSGT00940000157555.h.b	ENSGT00940000160416.n	ENSGT00940000160416.m	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.a ##32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Mouse	MODERN SPECIES	12	Selenof (ENSMUSG00000037072)	Sh3glb1 (ENSMUSG00000037062)	Clca3a1 (ENSMUSG00000056025)	Clca3a2 (ENSMUSG00000028262)	Clca3b (ENSMUSG00000037033)	Clca4b (ENSMUSG00000074195)	Clca4a (ENSMUSG00000068547)	Clca1 (ENSMUSG00000028255)	Clca2 (ENSMUSG00000036960) #7	Odf2l (ENSMUSG00000028256) #8	Col24a1 (ENSMUSG00000028197)	Znhit6 (ENSMUSG00000074182) #13	Ccn1 (ENSMUSG00000028195) #15	Ddah1 (ENSMUSG00000028194) #18	Bcl10 (ENSMUSG00000028191) #21	2410004B18Rik (ENSMUSG00000036873) #22	Syde2 (ENSMUSG00000036863) #24	Dnai3 (ENSMUSG00000043020) #25	Mcoln3 (ENSMUSG00000036853) #26	Mcoln2 (ENSMUSG00000011008) #27	Lpar3 (ENSMUSG00000036832) #28	Ssx2ip (ENSMUSG00000036825) #29	Ctbs (ENSMUSG00000028189) #30	Spata1 (ENSMUSG00000028188) #31	Gng5 (ENSMUSG00000068523) ##32	Rpf1 (ENSMUSG00000028187) #33	Uox (ENSMUSG00000028186) #35	Dnase2b (ENSMUSG00000028185) #34	4930503B20Rik (ENSMUSG00000090202)	Samd13 (ENSMUSG00000048652) #36	Prkacb (ENSMUSG00000005034) #37
Mus_C	ANCESTRAL SPECIES	6	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.h.a.a	ENSGT00940000157555.h.b	ENSGT00940000160416.m	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Steppe mouse	MODERN SPECIES	3408										ENSMSIG00000006728	Znhit6 (ENSMSIG00000006758) #13	Ccn1 (ENSMSIG00000006855) #15	ENSMSIG00000006885 #16	Ddah1 (ENSMSIG00000006895) #18	Bcl10 (ENSMSIG00000006967) #21	2410004B18Rik (ENSMSIG00000006989) #22	Syde2 (ENSMSIG00000006994) #24	Dnai3 (ENSMSIG00000007023) #25	Mcoln3 (ENSMSIG00000007086) #26	Mcoln2 (ENSMSIG00000007140) #27	Lpar3 (ENSMSIG00000007212) #28	ENSMSIG00000007226	Ssx2ip (ENSMSIG00000007247) #29	Ctbs (ENSMSIG00000007413) #30	Spata1 (ENSMSIG00000007443) #31	ENSMSIG00000007613 #32	Rpf1 (ENSMSIG00000007632) #33	Dnase2b (ENSMSIG00000007688) #34	ENSMSIG00000007717 #35	4930503B20Rik (ENSMSIG00000007775)	Prkacb (ENSMSIG00000007822) #37
spretus	MODERN SPECIES	12	Pkn2 (MGP_SPRETEiJ_G0026654)	Lmo4 (MGP_SPRETEiJ_G0026655)	Hs2st1 (MGP_SPRETEiJ_G0026656)	MGP_SPRETEiJ_G0026657	Sh3glb1 (MGP_SPRETEiJ_G0026658)	MGP_SPRETEiJ_G0026659	Clca3b (MGP_SPRETEiJ_G0026660)	Clca1 (MGP_SPRETEiJ_G0026661)	Clca2 (MGP_SPRETEiJ_G0026662) #7	Odf2l (MGP_SPRETEiJ_G0026663) #8	Col24a1 (MGP_SPRETEiJ_G0026664)	Znhit6 (MGP_SPRETEiJ_G0026665) #13	Ccn1 (MGP_SPRETEiJ_G0026666) #15	Ddah1 (MGP_SPRETEiJ_G0026667) #18	MGP_SPRETEiJ_G0026668 #21	2410004B18Rik (MGP_SPRETEiJ_G0026669) #22	Syde2 (MGP_SPRETEiJ_G0026670) #24	Dnai3 (MGP_SPRETEiJ_G0026671) #25	MGP_SPRETEiJ_G0026672 #26	Mcoln2 (MGP_SPRETEiJ_G0026673) #27	Lpar3 (MGP_SPRETEiJ_G0026674) #28	Ssx2ip (MGP_SPRETEiJ_G0026675) #29	Ctbs (MGP_SPRETEiJ_G0026676) #30	Spata1 (MGP_SPRETEiJ_G0026677) #31	MGP_SPRETEiJ_G0026678 ##32	Rpf1 (MGP_SPRETEiJ_G0026679) #33	Uox (MGP_SPRETEiJ_G0026680) #35	Dnase2b (MGP_SPRETEiJ_G0026681) #34	4930503B20Rik (MGP_SPRETEiJ_G0026682)	Samd13 (MGP_SPRETEiJ_G0026683) #36	Prkacb (MGP_SPRETEiJ_G0026684) #37
Ryukyu mouse	MODERN SPECIES	12	Hs2st1 (MGP_CAROLIEiJ_G0025701)	MGP_CAROLIEiJ_G0025702	Sh3glb1 (MGP_CAROLIEiJ_G0025703)	MGP_CAROLIEiJ_G0025704	MGP_CAROLIEiJ_G0025705	Clca3b (MGP_CAROLIEiJ_G0025706)	MGP_CAROLIEiJ_G0025707	MGP_CAROLIEiJ_G0025708	Clca1 (MGP_CAROLIEiJ_G0025709)	Clca2 (MGP_CAROLIEiJ_G0025710) #7	Odf2l (MGP_CAROLIEiJ_G0025711) #8	Col24a1 (MGP_CAROLIEiJ_G0025712)	Znhit6 (MGP_CAROLIEiJ_G0025713) #13	Ccn1 (MGP_CAROLIEiJ_G0025714) #15	Ddah1 (MGP_CAROLIEiJ_G0025715) #18	2410004B18Rik (MGP_CAROLIEiJ_G0025716) #22	Syde2 (MGP_CAROLIEiJ_G0025717) #24	Dnai3 (MGP_CAROLIEiJ_G0025718) #25	Mcoln3 (MGP_CAROLIEiJ_G0025719) #26	Mcoln2 (MGP_CAROLIEiJ_G0025720) #27	Lpar3 (MGP_CAROLIEiJ_G0025721) #28	Ssx2ip (MGP_CAROLIEiJ_G0025722) #29	Ctbs (MGP_CAROLIEiJ_G0025723) #30	Spata1 (MGP_CAROLIEiJ_G0025724) #31	MGP_CAROLIEiJ_G0025725 #32	Rpf1 (MGP_CAROLIEiJ_G0025726) #33	Uox (MGP_CAROLIEiJ_G0025727) #35	Dnase2b (MGP_CAROLIEiJ_G0025728) #34	4930503B20Rik (MGP_CAROLIEiJ_G0025729)	Samd13 (MGP_CAROLIEiJ_G0025730) #36	Prkacb (MGP_CAROLIEiJ_G0025731) #37
Shrew mouse	MODERN SPECIES	17	MGP_PahariEiJ_G0027152	Sh3glb1 (MGP_PahariEiJ_G0027153)	MGP_PahariEiJ_G0027154	MGP_PahariEiJ_G0027155	Clca3b (MGP_PahariEiJ_G0027156)	MGP_PahariEiJ_G0027157	MGP_PahariEiJ_G0027158	Clca1 (MGP_PahariEiJ_G0027159)	Clca2 (MGP_PahariEiJ_G0027160) #7	Odf2l (MGP_PahariEiJ_G0027161) #8	Col24a1 (MGP_PahariEiJ_G0027162)	Znhit6 (MGP_PahariEiJ_G0027163) #13	Ccn1 (MGP_PahariEiJ_G0027164) #15	Ddah1 (MGP_PahariEiJ_G0027165) #18	Bcl10 (MGP_PahariEiJ_G0027166) #21	2410004B18Rik (MGP_PahariEiJ_G0027167) #22	Syde2 (MGP_PahariEiJ_G0027168) #24	Dnai3 (MGP_PahariEiJ_G0027169) #25	Mcoln3 (MGP_PahariEiJ_G0027170) #26	Mcoln2 (MGP_PahariEiJ_G0027171) #27	Lpar3 (MGP_PahariEiJ_G0027172) #28	Ssx2ip (MGP_PahariEiJ_G0027173) #29	Ctbs (MGP_PahariEiJ_G0027174) #30	Spata1 (MGP_PahariEiJ_G0027175) #31	MGP_PahariEiJ_G0027176 #32	MGP_PahariEiJ_G0027177 #33	Uox (MGP_PahariEiJ_G0027178) #35	Dnase2b (MGP_PahariEiJ_G0027179) #34	4930503B20Rik (MGP_PahariEiJ_G0027180)	Samd13 (MGP_PahariEiJ_G0027181) #36	Prkacb (MGP_PahariEiJ_G0027182) #37
Rat	MODERN SPECIES	11	Lmo4 (ENSRNOG00000009205)	Hs2st1 (ENSRNOG00000012549)	Selenof (ENSRNOG00000055257)	Sh3glb1 (ENSRNOG00000012957)	Clca5 (ENSRNOG00000013334)	Clca4l (ENSRNOG00000036877)	Clca4 (ENSRNOG00000029889)	Clca1 (ENSRNOG00000060831)	Clca2 (ENSRNOG00000013771) #7	Odf2l (ENSRNOG00000014059) #8	Col24a1 (ENSRNOG00000014143)	Znhit6 (ENSRNOG00000030049) #13	Ccn1 (ENSRNOG00000014350) #15	Ddah1 (ENSRNOG00000014613) #18	Bcl10 (ENSRNOG00000042389) #21	C2h1orf52 (ENSRNOG00000014857) #22	Syde2 (ENSRNOG00000026186) #24	Dnai3 (ENSRNOG00000014893) #25	Mcoln3 (ENSRNOG00000015024) #26	Mcoln2 (ENSRNOG00000015089) #27	Lpar3 (ENSRNOG00000064204) #28	Ssx2ip (ENSRNOG00000015425) #29	Ctbs (ENSRNOG00000015573) #30	Spata1 (ENSRNOG00000015678) #31	ENSRNOG00000068715 ##32	Rpf1 (ENSRNOG00000015969) #33	Uox (ENSRNOG00000016339) #35	Dnase2b (ENSRNOG00000016262) #34	Samd13 (ENSRNOG00000016432)	Prkacb (ENSRNOG00000004978) #37	Ttll7 (ENSRNOG00000031997)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1893	ENSNGAG00000017891	ENSNGAG00000011552	Sh3glb1 (ENSNGAG00000008323)	ENSNGAG00000022151	ENSNGAG00000020840	ENSNGAG00000021773	Clca1 (ENSNGAG00000020353)	Clca2 (ENSNGAG00000017320) #7	Odf2l (ENSNGAG00000018510) #8	ENSNGAG00000015725 #11	Znhit6 (ENSNGAG00000007630) #13	Ccn1 (ENSNGAG00000001335) #15	ENSNGAG00000003738	Ddah1 (ENSNGAG00000018033) #18	Bcl10 (ENSNGAG00000015335) #21	2410004B18Rik (ENSNGAG00000014421) #22	Syde2 (ENSNGAG00000012962) #24	Dnai3 (ENSNGAG00000011144) #25	Mcoln3 (ENSNGAG00000018883) #26	Mcoln2 (ENSNGAG00000016270) #27	Lpar3 (ENSNGAG00000020209) #28	Ssx2ip (ENSNGAG00000001910) #29	Ctbs (ENSNGAG00000008828) #30	Spata1 (ENSNGAG00000019652) #31	ENSNGAG00000018264 #32	Rpf1 (ENSNGAG00000018028) #33	Dnase2b (ENSNGAG00000011775) #34	Uox (ENSNGAG00000022385) #35	4930503B20Rik (ENSNGAG00000021614)	Samd13 (ENSNGAG00000013463) #36	Prkacb (ENSNGAG00000023069) #37
Lesser Egyptian jerboa	MODERN SPECIES	52	Lmo4 (ENSJJAG00000012847)	Hs2st1 (ENSJJAG00000000519)	ENSJJAG00000009914	Sh3glb1 (ENSJJAG00000018470)	ENSJJAG00000018844	ENSJJAG00000023348	Clca1 (ENSJJAG00000008764)	Clca2 (ENSJJAG00000012700) #7	Odf2l (ENSJJAG00000007954) #8	ENSJJAG00000020958 #11	Znhit6 (ENSJJAG00000021153) #13	Ccn1 (ENSJJAG00000018163) #15	ENSJJAG00000012670 #16	Ddah1 (ENSJJAG00000016256) #18	Bcl10 (ENSJJAG00000001473) #21	2410004B18Rik (ENSJJAG00000011597) #22	Syde2 (ENSJJAG00000018610) #24	Dnai3 (ENSJJAG00000023564) #25	Mcoln3 (ENSJJAG00000023078) #26	Mcoln2 (ENSJJAG00000014832) #27	Lpar3 (ENSJJAG00000021688) #28	Ssx2ip (ENSJJAG00000010467) #29	Ctbs (ENSJJAG00000018386) #30	ENSJJAG00000006619 #31	ENSJJAG00000014898 #31	ENSJJAG00000011539 #32	Rpf1 (ENSJJAG00000018873) #33	Dnase2b (ENSJJAG00000009922) #34	Uox (ENSJJAG00000008960) #35	4930503B20Rik (ENSJJAG00000022696)	Samd13 (ENSJJAG00000021117) #36
Kangaroo rat	MODERN SPECIES	358	Prkab2 (ENSDORG00000027473)	ENSDORG00000024515	Sec22b (ENSDORG00000023311)	Notch2 (ENSDORG00000001171)	Reg4 (ENSDORG00000009271)	Hmgcs2 (ENSDORG00000008532)	Phgdh (ENSDORG00000008531)	Clca1 (ENSDORG00000008434)	Clca2 (ENSDORG00000009200) #7	Odf2l (ENSDORG00000009195) #8	ENSDORG00000015616 #11	Znhit6 (ENSDORG00000029755) #13	Ccn1 (ENSDORG00000005602) #15	Ddah1 (ENSDORG00000013259) #18	ENSDORG00000028780 #21	2410004B18Rik (ENSDORG00000012509) #22	Syde2 (ENSDORG00000005799) #24	Dnai3 (ENSDORG00000015030) #25	Mcoln3 (ENSDORG00000014635) #26	Mcoln2 (ENSDORG00000014631) #27	Lpar3 (ENSDORG00000014630) #28	Ssx2ip (ENSDORG00000015060) #29	Ctbs (ENSDORG00000015059) #30	ENSDORG00000029065 #31	ENSDORG00000029873 #31	ENSDORG00000024192	Rpf1 (ENSDORG00000000607) #33	Dnase2b (ENSDORG00000000604) #34	Uox (ENSDORG00000027583) #35	4930503B20Rik (ENSDORG00000029007)	Samd13 (ENSDORG00000026931) #36
Lagomorpha	ANCESTRAL SPECIES	73	ENSGT00940000155827	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00960000193082	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36
Rabbit	MODERN SPECIES	4	ENSOCUG00000030334	ENSOCUG00000025724	ENSOCUG00000015437	ENSOCUG00000033661	CLCA1 (ENSOCUG00000004736)	CLCA2 (ENSOCUG00000004727) #7	ODF2L (ENSOCUG00000001834) #8	ENSOCUG00000036832	COL24A1 (ENSOCUG00000003917) #11	ZNHIT6 (ENSOCUG00000003910) #13	CCN1 (ENSOCUG00000003905) #15	ENSOCUG00000026503	DDAH1 (ENSOCUG00000005249) #18	BCL10 (ENSOCUG00000016199) #21	ENSOCUG00000035286	C1orf52 (ENSOCUG00000002803) #22	SYDE2 (ENSOCUG00000022246) #24	DNAI3 (ENSOCUG00000010160) #25	MCOLN3 (ENSOCUG00000009332) #26	MCOLN2 (ENSOCUG00000009322) #27	ENSOCUG00000027616	LPAR3 (ENSOCUG00000024789) #28	SSX2IP (ENSOCUG00000015685) #29	ENSOCUG00000032268	CTBS (ENSOCUG00000003059) #30	SPATA1 (ENSOCUG00000006613) #31	GNG5 (ENSOCUG00000036571) #32	ENSOCUG00000014803 #33	ENSOCUG00000027397 #35	ENSOCUG00000029744 #34	ENSOCUG00000023908
Pika	MODERN SPECIES	2693												ENSOPRG00000011386 #13	CCN1 (ENSOPRG00000011377) #15	DDAH1 (ENSOPRG00000011345) #18	BCL10 (ENSOPRG00000011338) #21	C1orf52 (ENSOPRG00000011332) #22
Primates	ANCESTRAL SPECIES	4	ENSGT00500000046198	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.a ##32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000161169 #37
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.a ##32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000161169 #37
Mouse lemur	MODERN SPECIES	11	SELENOF (ENSMICG00000015940)	ENSMICG00000037323	SH3GLB1 (ENSMICG00000015928)	ENSMICG00000034178	CLCA4 (ENSMICG00000015889)	ENSMICG00000031237	CLCA1 (ENSMICG00000015876)	ODF2L (ENSMICG00000015848) #8	COL24A1 (ENSMICG00000015782) #11	ZNHIT6 (ENSMICG00000015775) #13	CCN1 (ENSMICG00000015764) #15	ENSMICG00000033242	DDAH1 (ENSMICG00000015756) #18	ENSMICG00000029851	BCL10 (ENSMICG00000046947) #21	C1orf52 (ENSMICG00000015748) #22	SYDE2 (ENSMICG00000036942) #24	DNAI3 (ENSMICG00000014988) #25	MCOLN3 (ENSMICG00000014973) #26	MCOLN2 (ENSMICG00000014951) #27	LPAR3 (ENSMICG00000034976) #28	SSX2IP (ENSMICG00000031693) #29	CTBS (ENSMICG00000047868) #30	SPATA1 (ENSMICG00000034514) #31	ENSMICG00000027648 ##32	ENSMICG00000003093 #33	DNASE2B (ENSMICG00000037013) #34	ENSMICG00000037252 #35	ENSMICG00000042739	SAMD13 (ENSMICG00000036198) #36	ENSMICG00000047801
Lemuriformes_a	ANCESTRAL SPECIES	39	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.a ##32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00940000159078
Greater bamboo lemur	MODERN SPECIES	537	SELENOF (ENSPSMG00000021549)	SH3GLB1 (ENSPSMG00000021643)	ENSPSMG00000021689	ENSPSMG00000021691	CLCA4 (ENSPSMG00000021703)	CLCA1 (ENSPSMG00000021724)	CLCA2 (ENSPSMG00000021729) #7	ODF2L (ENSPSMG00000021792) #8	COL24A1 (ENSPSMG00000021850) #11	ZNHIT6 (ENSPSMG00000021864) #13	ENSPSMG00000021872	CCN1 (ENSPSMG00000021878) #15	ENSPSMG00000021882 #16	DDAH1 (ENSPSMG00000021897) #18	BCL10 (ENSPSMG00000021929) #21	C1orf52 (ENSPSMG00000021942) #22	SYDE2 (ENSPSMG00000021951) #24	DNAI3 (ENSPSMG00000021999) #25	MCOLN3 (ENSPSMG00000022026) #26	MCOLN2 (ENSPSMG00000022039) #27	LPAR3 (ENSPSMG00000022047) #28	SSX2IP (ENSPSMG00000022107) #29	CTBS (ENSPSMG00000022172) #30	SPATA1 (ENSPSMG00000022182) #31	ENSPSMG00000022188 ##32	RPF1 (ENSPSMG00000022204) #33	DNASE2B (ENSPSMG00000022211) #34	ENSPSMG00000022213 #35	SAMD13 (ENSPSMG00000022221) #36	ENSPSMG00000022228	ENSPSMG00000022233
Coquerels sifaka	MODERN SPECIES	846	HS2ST1 (ENSPCOG00000023483)	SELENOF (ENSPCOG00000008918)	ENSPCOG00000022033	SH3GLB1 (ENSPCOG00000006000)	ENSPCOG00000013545	CLCA4 (ENSPCOG00000016905)	CLCA1 (ENSPCOG00000024996)	CLCA2 (ENSPCOG00000025009) #7	COL24A1 (ENSPCOG00000021719) #11	ENSPCOG00000026821	ZNHIT6 (ENSPCOG00000014824) #13	CCN1 (ENSPCOG00000020683) #15	ENSPCOG00000013303	DDAH1 (ENSPCOG00000028125) #18	BCL10 (ENSPCOG00000026735) #21	C1orf52 (ENSPCOG00000022149) #22	SYDE2 (ENSPCOG00000019185) #24	DNAI3 (ENSPCOG00000007531) #25	MCOLN3 (ENSPCOG00000021992) #26	MCOLN2 (ENSPCOG00000017147) #27	LPAR3 (ENSPCOG00000020815) #28	SSX2IP (ENSPCOG00000011853) #29	CTBS (ENSPCOG00000021717) #30	SPATA1 (ENSPCOG00000028221) #31	ENSPCOG00000019625 ##32	ENSPCOG00000022483 #33	DNASE2B (ENSPCOG00000020958) #34	ENSPCOG00000014070	SAMD13 (ENSPCOG00000028743) #36	PRKACB (ENSPCOG00000014437) #37	TTLL7 (ENSPCOG00000017715)
Bushbaby	MODERN SPECIES	125	ENSOGAG00000030868	LMO4 (ENSOGAG00000002297)	HS2ST1 (ENSOGAG00000026296)	SH3GLB1 (ENSOGAG00000009494)	ENSOGAG00000014165	CLCA4 (ENSOGAG00000014158)	CLCA1 (ENSOGAG00000014152)	CLCA2 (ENSOGAG00000014147) #7	ODF2L (ENSOGAG00000014145) #8	COL24A1 (ENSOGAG00000010965) #11	ZNHIT6 (ENSOGAG00000010963) #13	CCN1 (ENSOGAG00000010959) #15	ENSOGAG00000033406	DDAH1 (ENSOGAG00000009978) #18	BCL10 (ENSOGAG00000009976) #21	C1orf52 (ENSOGAG00000008908) #22	SYDE2 (ENSOGAG00000008376) #24	DNAI3 (ENSOGAG00000007725) #25	MCOLN3 (ENSOGAG00000007722) #26	MCOLN2 (ENSOGAG00000007718) #27	LPAR3 (ENSOGAG00000016851) #28	SSX2IP (ENSOGAG00000004650) #29	CTBS (ENSOGAG00000004649) #30	SPATA1 (ENSOGAG00000004646) #31	GNG5 (ENSOGAG00000004645) #32	RPF1 (ENSOGAG00000004642) #33	DNASE2B (ENSOGAG00000005849) #34	ENSOGAG00000028035 #35	SAMD13 (ENSOGAG00000005845) #36	PRKACB (ENSOGAG00000005838) #37	TTLL7 (ENSOGAG00000005832)
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00500000046198	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00910000147782	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00940000164507	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00910000147782	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00530000063408.B	ENSGT00940000164507	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00940000159078
Hominidae	ANCESTRAL SPECIES	3	ENSGT00530000063408.B	ENSGT00940000164507	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00940000159078
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00530000063408.B	ENSGT00940000164507	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b.f #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00940000159078
Gorilla	MODERN SPECIES		ENSGGOG00000043302	ENSGGOG00000043813	CLCA4 (ENSGGOG00000014623)	CLCA1 (ENSGGOG00000011756)	CLCA2 (ENSGGOG00000003746) #7	ENSGGOG00000036344	ODF2L (ENSGGOG00000039102) #8	ODF2L (ENSGGOG00000002571) #8	ENSGGOG00000022054	COL24A1 (ENSGGOG00000000424) #11	ZNHIT6 (ENSGGOG00000001289) #13	CCN1 (ENSGGOG00000006978) #15	ENSGGOG00000037302	ENSGGOG00000041543 #18	ENSGGOG00000044072 #21	C1orf52 (ENSGGOG00000027688) #22	SYDE2 (ENSGGOG00000002813) #24	DNAI3 (ENSGGOG00000024273) #25	MCOLN3 (ENSGGOG00000007413) #26	MCOLN2 (ENSGGOG00000012178) #27	LPAR3 (ENSGGOG00000011067) #28	SSX2IP (ENSGGOG00000002229) #29	CTBS (ENSGGOG00000015738) #30	ENSGGOG00000039621 #31	ENSGGOG00000026782	RPF1 (ENSGGOG00000015862) #33	DNASE2B (ENSGGOG00000007963) #34	ENSGGOG00000042098 #35	SAMD13 (ENSGGOG00000002150) #36	ENSGGOG00000039232	ENSGGOG00000038622
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00530000063408.B	ENSGT00940000164507	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b.f #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00940000159078
Pan	ANCESTRAL SPECIES		ENSGT00530000063408.B	ENSGT00940000164507	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b.f #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT00910000145621	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT01010000224294	ENSGT00940000161169 #37
Chimpanzee	MODERN SPECIES		HS2ST1 (ENSPTRG00000000927)	SELENOF (ENSPTRG00000046631)	SH3GLB1 (ENSPTRG00000000925)	ENSPTRG00000051840	ENSPTRG00000044041	CLCA4 (ENSPTRG00000000923)	CLCA1 (ENSPTRG00000000922)	CLCA2 (ENSPTRG00000000921) #7	ODF2L (ENSPTRG00000000919) #8	COL24A1 (ENSPTRG00000052159) #11	ZNHIT6 (ENSPTRG00000000917) #13	CCN1 (ENSPTRG00000000916) #15	ENSPTRG00000045650	DDAH1 (ENSPTRG00000000915) #18	BCL10 (ENSPTRG00000000914) #21	C1H1orf52 (ENSPTRG00000000913) #22	SYDE2 (ENSPTRG00000000912) #24	DNAI3 (ENSPTRG00000000910) #25	MCOLN3 (ENSPTRG00000000909) #26	MCOLN2 (ENSPTRG00000000908) #27	LPAR3 (ENSPTRG00000000907) #28	SSX2IP (ENSPTRG00000000906) #29	CTBS (ENSPTRG00000000904) #30	SPATA1 (ENSPTRG00000000903) #31	GNG5 (ENSPTRG00000000902)	RPF1 (ENSPTRG00000000901) #33	DNASE2B (ENSPTRG00000000900) #34	ENSPTRG00000043173 #35	SAMD13 (ENSPTRG00000030549) #36	ENSPTRG00000041946	ENSPTRG00000051420
Bonobo	MODERN SPECIES		ENSPPAG00000032573	HS2ST1 (ENSPPAG00000039539)	SELENOF (ENSPPAG00000034847)	SH3GLB1 (ENSPPAG00000037511)	ENSPPAG00000027864	CLCA4 (ENSPPAG00000030240)	CLCA1 (ENSPPAG00000042810)	CLCA2 (ENSPPAG00000037646) #7	ODF2L (ENSPPAG00000035946) #8	COL24A1 (ENSPPAG00000031760) #11	ZNHIT6 (ENSPPAG00000044095) #13	CCN1 (ENSPPAG00000036034) #15	ENSPPAG00000008964	ENSPPAG00000032273 #18	ENSPPAG00000039334 #21	C1orf52 (ENSPPAG00000033419) #22	SYDE2 (ENSPPAG00000008094) #24	DNAI3 (ENSPPAG00000028762) #25	MCOLN3 (ENSPPAG00000018460) #26	MCOLN2 (ENSPPAG00000035292) #27	LPAR3 (ENSPPAG00000042081) #28	SSX2IP (ENSPPAG00000030204) #29	CTBS (ENSPPAG00000041122) #30	SPATA1 (ENSPPAG00000031268) #31	ENSPPAG00000034135	RPF1 (ENSPPAG00000038610) #33	DNASE2B (ENSPPAG00000031087) #34	ENSPPAG00000042063 #35	SAMD13 (ENSPPAG00000028733) #36	ENSPPAG00000028069	PRKACB (ENSPPAG00000031832) #37
Human	MODERN SPECIES		PKN2 (ENSG00000065243)	LMO4 (ENSG00000143013)	ENSG00000267561	HS2ST1 (ENSG00000153936)	SELENOF (ENSG00000183291)	SH3GLB1 (ENSG00000097033)	CLCA4 (ENSG00000016602)	CLCA1 (ENSG00000016490)	CLCA2 (ENSG00000137975) #7	ODF2L (ENSG00000122417) #8	COL24A1 (ENSG00000171502) #11	ZNHIT6 (ENSG00000117174) #13	CCN1 (ENSG00000142871) #15	DDAH1 (ENSG00000153904) #18	BCL10 (ENSG00000142867) #21	C1orf52 (ENSG00000162642) #22	SYDE2 (ENSG00000097096) #24	MCOLN3 (ENSG00000055732) #26	DNAI3 (ENSG00000162643) #25	MCOLN2 (ENSG00000153898) #27	LPAR3 (ENSG00000171517) #28	SSX2IP (ENSG00000117155) #29	CTBS (ENSG00000117151) #30	SPATA1 (ENSG00000122432) #31	GNG5 (ENSG00000174021) #32	RPF1 (ENSG00000117133) #33	DNASE2B (ENSG00000137976) #34	SAMD13 (ENSG00000203943) #36	PRKACB (ENSG00000142875) #37	TTLL7 (ENSG00000137941)	ADGRL2 (ENSG00000117114)
Orangutan	MODERN SPECIES		LMO4 (ENSPPYG00000035178)	HS2ST1 (ENSPPYG00000001183)	ENSPPYG00000041718	SH3GLB1 (ENSPPYG00000001185)	ENSPPYG00000039489	CLCA4 (ENSPPYG00000001186)	CLCA1 (ENSPPYG00000001187)	CLCA2 (ENSPPYG00000001188) #7	ODF2L (ENSPPYG00000001189) #8	COL24A1 (ENSPPYG00000001190) #11	ZNHIT6 (ENSPPYG00000001191) #13	CCN1 (ENSPPYG00000001192) #15	DDAH1 (ENSPPYG00000001193) #18	BCL10 (ENSPPYG00000001194) #21	DNAI3 (ENSPPYG00000001197) #25	C1orf52 (ENSPPYG00000001195) #22	SYDE2 (ENSPPYG00000001196) #24	MCOLN3 (ENSPPYG00000001198) #26	MCOLN2 (ENSPPYG00000001199) #27	LPAR3 (ENSPPYG00000001200) #28	SSX2IP (ENSPPYG00000001201) #29	CTBS (ENSPPYG00000001203) #30	SPATA1 (ENSPPYG00000001204) #31	GNG5 (ENSPPYG00000040658)	RPF1 (ENSPPYG00000001206) #33	DNASE2B (ENSPPYG00000001207) #34	ENSPPYG00000038224 #36	ENSPPYG00000030371	ENSPPYG00000041194	PRKACB (ENSPPYG00000001209) #37	TTLL7 (ENSPPYG00000001210)
Gibbon	MODERN SPECIES	2	HS2ST1 (ENSNLEG00000010190)	ENSNLEG00000010186	SH3GLB1 (ENSNLEG00000010180)	ENSNLEG00000035396	ENSNLEG00000029420	CLCA4 (ENSNLEG00000010158)	ENSNLEG00000010178	CLCA1 (ENSNLEG00000010144)	CLCA2 (ENSNLEG00000010136) #7	ODF2L (ENSNLEG00000010126) #8	COL24A1 (ENSNLEG00000010050) #11	ZNHIT6 (ENSNLEG00000010042) #13	CCN1 (ENSNLEG00000010037) #15	DDAH1 (ENSNLEG00000010030) #18	ENSNLEG00000032635 #21	C1orf52 (ENSNLEG00000010021) #22	SYDE2 (ENSNLEG00000010018) #24	DNAI3 (ENSNLEG00000010010) #25	MCOLN3 (ENSNLEG00000009997) #26	MCOLN2 (ENSNLEG00000009988) #27	LPAR3 (ENSNLEG00000009986) #28	SSX2IP (ENSNLEG00000009961) #29	CTBS (ENSNLEG00000009947) #30	ENSNLEG00000009935 #31	ENSNLEG00000009934 #32	RPF1 (ENSNLEG00000009930) #33	DNASE2B (ENSNLEG00000009919) #34	ENSNLEG00000028021 #35	SAMD13 (ENSNLEG00000009912) #36	PRKACB (ENSNLEG00000009888) #37	ENSNLEG00000009911
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00940000155667	ENSGT01040000240503.C.m.b	ENSGT01040000240503.C.n	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00910000147782	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00940000159078
Cercopithecinae	DUPLICATION
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000154284.a	ENSGT00940000155667	ENSGT01040000240503.C.m.b	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00910000147782	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398.m #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00940000159078
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000155667	ENSGT01040000240503.C.m.b	ENSGT01040000240503.C.n	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00910000147782	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398.m #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00940000159078
Macaca	ANCESTRAL SPECIES		ENSGT00940000154284.a	ENSGT00940000155667	ENSGT01040000240503.C.m.b	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00910000147782	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398.m #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00940000159078
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000154284.a	ENSGT00940000155667	ENSGT01040000240503.C.m.b	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00950000182971.B.b.d.`b.b	ENSGT00940000164709.a.b.b.a.b.b.a.b.a.b.a	ENSGT00490000043442 #21	ENSGT00390000017398.m #22	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.a.a.b.b	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37
Rhesus	MODERN SPECIES		LMO4 (ENSMMUG00000017383)	HS2ST1 (ENSMMUG00000014056)	SELENOF (ENSMMUG00000016554)	SH3GLB1 (ENSMMUG00000013487)	ENSMMUG00000031997	ENSMMUG00000000813	CLCA4 (ENSMMUG00000010306)	CLCA1 (ENSMMUG00000006836)	ODF2L (ENSMMUG00000001380) #8	COL24A1 (ENSMMUG00000056386) #11	ZNHIT6 (ENSMMUG00000013203) #13	CCN1 (ENSMMUG00000013197) #15	DDAH1 (ENSMMUG00000014573) #18	ENSMMUG00000063360	BCL10 (ENSMMUG00000005720) #21	C1H1orf52 (ENSMMUG00000010020) #22	ENSMMUG00000053858	SYDE2 (ENSMMUG00000062232) #24	DNAI3 (ENSMMUG00000008932) #25	MCOLN3 (ENSMMUG00000005361) #26	MCOLN2 (ENSMMUG00000015403) #27	LPAR3 (ENSMMUG00000015402) #28	SSX2IP (ENSMMUG00000006203) #29	CTBS (ENSMMUG00000010127) #30	SPATA1 (ENSMMUG00000022183) #31	GNG5 (ENSMMUG00000022182) #32	DNASE2B (ENSMMUG00000000406) #34	UOX (ENSMMUG00000000404) #35	SAMD13 (ENSMMUG00000000402) #36	PRKACB (ENSMMUG00000003457) #37	TTLL7 (ENSMMUG00000016591)
Pig-tailed macaque	MODERN SPECIES	582	SH3GLB1 (ENSMNEG00000039647)	ENSMNEG00000038414	ENSMNEG00000011468	ENSMNEG00000028586	CLCA4 (ENSMNEG00000028107)	CLCA1 (ENSMNEG00000041265)	CLCA2 (ENSMNEG00000019614) #7	ODF2L (ENSMNEG00000043756) #8	COL24A1 (ENSMNEG00000038307) #11	ZNHIT6 (ENSMNEG00000040791) #13	ENSMNEG00000028396	CCN1 (ENSMNEG00000044316) #15	ENSMNEG00000027123	DDAH1 (ENSMNEG00000044101) #18	BCL10 (ENSMNEG00000041167) #21	ENSMNEG00000038949 #22	SYDE2 (ENSMNEG00000041819) #24	DNAI3 (ENSMNEG00000038794) #25	MCOLN3 (ENSMNEG00000041473) #26	MCOLN2 (ENSMNEG00000031675) #27	LPAR3 (ENSMNEG00000028515) #28	SSX2IP (ENSMNEG00000032502) #29	CTBS (ENSMNEG00000015862) #30	SPATA1 (ENSMNEG00000026868) #31	ENSMNEG00000037441 ##32	RPF1 (ENSMNEG00000029462) #33	DNASE2B (ENSMNEG00000033755) #34	ENSMNEG00000032497 #35	SAMD13 (ENSMNEG00000028489) #36	PRKACB (ENSMNEG00000039211) #37	TTLL7 (ENSMNEG00000040306)
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT01040000240503.C.n	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00910000147782	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398.m #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00940000159078
Olive baboon	MODERN SPECIES		LMO4 (ENSPANG00000010805)	HS2ST1 (ENSPANG00000007566)	SELENOF (ENSPANG00000016208)	SH3GLB1 (ENSPANG00000022726)	ENSPANG00000029610	ENSPANG00000004994	CLCA4 (ENSPANG00000002387)	CLCA1 (ENSPANG00000002388)	ENSPANG00000050633	CLCA2 (ENSPANG00000030570) #7	ODF2L (ENSPANG00000025618) #8	COL24A1 (ENSPANG00000026362) #11	ZNHIT6 (ENSPANG00000004996) #13	CCN1 (ENSPANG00000007480) #15	ENSPANG00000016437 #21	C1orf52 (ENSPANG00000016435) #22	SYDE2 (ENSPANG00000010806) #24	ENSPANG00000044964	MCOLN3 (ENSPANG00000006002) #26	DNAI3 (ENSPANG00000000769) #25	MCOLN2 (ENSPANG00000000768) #27	LPAR3 (ENSPANG00000036959) #28	SSX2IP (ENSPANG00000025619) #29	CTBS (ENSPANG00000005231) #30	SPATA1 (ENSPANG00000010807) #31	GNG5 (ENSPANG00000031198) #32	RPF1 (ENSPANG00000010052) #33	DNASE2B (ENSPANG00000016899) #34	ENSPANG00000047198	ENSPANG00000011777 #35	SAMD13 (ENSPANG00000001347) #36
Cercopithecinae_d	ANCESTRAL SPECIES	19	ENSGT00940000155667	ENSGT01040000240503.C.n	ENSGT00940000157555	ENSGT00940000155097	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00910000147782	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398.m #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00940000159078
Sooty mangabey	MODERN SPECIES	206	SH3GLB1 (ENSCATG00000040359)	ENSCATG00000030962	ENSCATG00000042894	ENSCATG00000021850	CLCA4 (ENSCATG00000037640)	CLCA1 (ENSCATG00000031780)	CLCA2 (ENSCATG00000039534) #7	ODF2L (ENSCATG00000038042) #8	COL24A1 (ENSCATG00000039662) #11	ZNHIT6 (ENSCATG00000042430) #13	ENSCATG00000018597	CCN1 (ENSCATG00000033425) #15	ENSCATG00000017253	DDAH1 (ENSCATG00000029993) #18	BCL10 (ENSCATG00000033396) #21	C1orf52 (ENSCATG00000042900) #22	SYDE2 (ENSCATG00000036631) #24	DNAI3 (ENSCATG00000033130) #25	ENSCATG00000015242	MCOLN3 (ENSCATG00000005637) #26	MCOLN2 (ENSCATG00000031947) #27	LPAR3 (ENSCATG00000032286) #28	SSX2IP (ENSCATG00000041325) #29	CTBS (ENSCATG00000040682) #30	SPATA1 (ENSCATG00000031914) #31	ENSCATG00000033299 #32	RPF1 (ENSCATG00000010531) #33	DNASE2B (ENSCATG00000035673) #34	ENSCATG00000040810 #35	SAMD13 (ENSCATG00000031358) #36	PRKACB (ENSCATG00000042182) #37
Drill	MODERN SPECIES	844	ENSMLEG00000032120	ENSMLEG00000002129	ENSMLEG00000031336	CLCA4 (ENSMLEG00000039886)	CLCA1 (ENSMLEG00000035926)	CLCA2 (ENSMLEG00000043718) #7	ODF2L (ENSMLEG00000031271) #8	COL24A1 (ENSMLEG00000000835) #11	ZNHIT6 (ENSMLEG00000035430) #13	ENSMLEG00000022308	CCN1 (ENSMLEG00000033648) #15	ENSMLEG00000000851	DDAH1 (ENSMLEG00000033808) #18	ENSMLEG00000036908	BCL10 (ENSMLEG00000036065) #21	ENSMLEG00000000077 #22	SYDE2 (ENSMLEG00000041726) #24	DNAI3 (ENSMLEG00000036533) #25	MCOLN3 (ENSMLEG00000034178) #26	MCOLN2 (ENSMLEG00000026041) #27	LPAR3 (ENSMLEG00000043685) #28	SSX2IP (ENSMLEG00000024502) #29	CTBS (ENSMLEG00000033283) #30	SPATA1 (ENSMLEG00000040493) #31	GNG5 (ENSMLEG00000039037) #32	RPF1 (ENSMLEG00000038165) #33	ENSMLEG00000025772 #34
Vervet Monkey	MODERN SPECIES	12	PKN2 (ENSCSAG00000001444)	LMO4 (ENSCSAG00000001442)	HS2ST1 (ENSCSAG00000001441)	SELENOF (ENSCSAG00000001440)	SH3GLB1 (ENSCSAG00000001439)	ENSCSAG00000001438	CLCA4 (ENSCSAG00000001436)	CLCA1 (ENSCSAG00000001434)	CLCA2 (ENSCSAG00000001433) #7	ODF2L (ENSCSAG00000001432) #8	COL24A1 (ENSCSAG00000001431) #11	ZNHIT6 (ENSCSAG00000001430) #13	CCN1 (ENSCSAG00000001429) #15	DDAH1 (ENSCSAG00000001428) #18	BCL10 (ENSCSAG00000001427) #21	ENSCSAG00000001426 #22	SYDE2 (ENSCSAG00000001425) #24	DNAI3 (ENSCSAG00000001424) #25	MCOLN3 (ENSCSAG00000001423) #26	MCOLN2 (ENSCSAG00000001422) #27	LPAR3 (ENSCSAG00000001421) #28	SSX2IP (ENSCSAG00000001420) #29	CTBS (ENSCSAG00000001419) #30	SPATA1 (ENSCSAG00000001418) #31	ENSCSAG00000001417 #33	DNASE2B (ENSCSAG00000001416) #34	ENSCSAG00000001415 #35	SAMD13 (ENSCSAG00000001414) #36	PRKACB (ENSCSAG00000001413) #37	TTLL7 (ENSCSAG00000001411)	ADGRL2 (ENSCSAG00000001410)
Cercopithecinae	ANCESTRAL SPECIES	50															ENSGT00940000154453.b.a.b.b	ENSGT00390000017398.n #22	ENSGT00940000163744.b	ENSGT00940000153236.b.b.b.a.a.a.a.b
Cercopithecinae_a	ANCESTRAL SPECIES	57															ENSGT00940000154453.b.a.b.b	ENSGT00390000017398.n #22	ENSGT00940000163744.b	ENSGT00940000153236.b.b.b.a.a.a.a.b
Macaca	ANCESTRAL SPECIES	21	ENSGT00390000008152.B.a	ENSGT00940000162643	ENSGT01050000244941.B.c ##28	ENSGT00950000183110.a	ENSGT00550000075064	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00940000153236.a.a.b.b	ENSGT00940000162960.A.c	ENSGT00940000154251.A.a.b	ENSGT01100000263507.D.a.a.a.b.b.b	ENSGT00940000154251.A.b.b.a.b.a.b	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.b	ENSGT00940000161765.A	ENSGT00390000017398.n #22	ENSGT00940000163744.b	ENSGT00940000153236.b.b.b.a.a.a.a.b
Pig-tailed macaque	MODERN SPECIES	158	ENSMNEG00000037128	ZNF93 (ENSMNEG00000029151)	ENSMNEG00000031867	ENSMNEG00000029397	ENSMNEG00000020719	ENSMNEG00000038897	ENSMNEG00000028060	ENSMNEG00000035467	ZNF708 (ENSMNEG00000030112)	ENSMNEG00000039384	ZNF493 (ENSMNEG00000031668)	ENSMNEG00000037674	ENSMNEG00000028241	ENSMNEG00000044249	ENSMNEG00000038592	ENSMNEG00000028075 #22	ZNF43 (ENSMNEG00000041691)	ENSMNEG00000033764	ZNF676 (ENSMNEG00000032899)
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00390000007227.b	ENSGT00390000008152.B.a	ENSGT00940000162643	ENSGT01050000244941.B.c ##28	ENSGT00950000183110.a	ENSGT00550000075064	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00940000165497.F.b.b.a.a.a	ENSGT00940000153236.a.a.b.b	ENSGT00940000162960.A.c	ENSGT00940000154251.A.a.b	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.b	ENSGT00940000161765.A	ENSGT01100000263493.a.b.b.a.a.b.b.b.a.a	ENSGT00390000017398.n #22	ENSGT00940000163744.b	ENSGT00940000153236.b.b.b.a.a.a.a.b	ENSGT00940000165698.B.a.b	ENSGT00940000165698.A	ENSGT00940000163381.a	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.a	ENSGT00940000153236.b.a.a.b.b.a.b	ENSGT00940000154251.A.b.b.a.b.b	ENSGT00910000146855.h	ENSGT00940000153236.b.a.a.b.b.b	ENSGT00940000154915.j	ENSGT00940000154453.b.a.a.a.b	ENSGT00390000001014.h	ENSGT00940000161356	ENSGT00390000010067
Rhesus	MODERN SPECIES	10	ZNF93 (ENSMMUG00000054055)	ENSMMUG00000063297	ZNF682 (ENSMMUG00000039104)	ENSMMUG00000056683	ENSMMUG00000052723	ENSMMUG00000049530	ENSMMUG00000031426	ENSMMUG00000062204	ENSMMUG00000062866	ZNF708 (ENSMMUG00000003686)	ZNF493 (ENSMMUG00000015533)	ZNF429 (ENSMMUG00000045427)	ENSMMUG00000056719	ENSMMUG00000028809	ZNF43 (ENSMMUG00000047027)	ENSMMUG00000046906 #22	ENSMMUG00000061186	ENSMMUG00000040273	ZNF208 (ENSMMUG00000063815)	ENSMMUG00000064561	ENSMMUG00000062521	ENSMMUG00000060408	ENSMMUG00000038943	ENSMMUG00000053961	ENSMMUG00000028816	ENSMMUG00000059643	ENSMMUG00000045698	ENSMMUG00000064404	ENSMMUG00000063831	ENSMMUG00000037794	ENSMMUG00000062694
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000003085	ENSMFAG00000037779	ENSMFAG00000061876	ENSMFAG00000033840	ZNF85 (ENSMFAG00000040852)	ZNF714 (ENSMFAG00000033982)	ENSMFAG00000065513	ENSMFAG00000064779	ZNF708 (ENSMFAG00000042298)	ZNF493 (ENSMFAG00000034400)	ENSMFAG00000065435	ENSMFAG00000049220	ENSMFAG00000063677	ZNF429 (ENSMFAG00000041253)	ENSMFAG00000037086	C1orf52 (ENSMFAG00000051304) #22	ZNF43 (ENSMFAG00000060864)	ENSMFAG00000044974	ENSMFAG00000042521	ENSMFAG00000032786	ENSMFAG00000065754	ENSMFAG00000037193	ENSMFAG00000037242	ENSMFAG00000044588	ENSMFAG00000030842	ENSMFAG00000001832	ZNF726 (ENSMFAG00000032109)	ENSMFAG00000040354	ENSMFAG00000065576	ZNF254 (ENSMFAG00000003947)	ENSMFAG00000039830
Cercopithecinae_b	ANCESTRAL SPECIES	245															ENSGT00940000154453.b.a.b.b	ENSGT00390000017398.n #22
Cercopithecinae_d	ANCESTRAL SPECIES	348															ENSGT00940000154453.b.a.b.b	ENSGT00390000017398.n #22
Drill	MODERN SPECIES	739		ENSMLEG00000035225	ENSMLEG00000041483	ENSMLEG00000043107	ENSMLEG00000036989	ENSMLEG00000035682	ENSMLEG00000017218	ZNF708 (ENSMLEG00000037376)	ENSMLEG00000003090	ENSMLEG00000031326	ENSMLEG00000037534	ZNF493 (ENSMLEG00000031771)	ENSMLEG00000038989	ENSMLEG00000040744	ENSMLEG00000031486	ENSMLEG00000033641 #22	ENSMLEG00000040268	TRIM32 (ENSMLEG00000026607)	ENSMLEG00000035253	TSPAN8 (ENSMLEG00000042492)	ENSMLEG00000036938	LGR5 (ENSMLEG00000029248)	ZFC3H1 (ENSMLEG00000029967)	THAP2 (ENSMLEG00000034029)	TMEM19 (ENSMLEG00000036183)	RAB21 (ENSMLEG00000032861)	TBC1D15 (ENSMLEG00000034361)	TPH2 (ENSMLEG00000000709)
Vervet Monkey	MODERN SPECIES	25	ZNF682 (ENSCSAG00000005029)	ENSCSAG00000005026	ENSCSAG00000005021	ENSCSAG00000005017	ENSCSAG00000005014	ZNF85 (ENSCSAG00000005012)	ENSCSAG00000005006	ENSCSAG00000005003	ENSCSAG00000004996	ENSCSAG00000004993	ENSCSAG00000004989	ENSCSAG00000004984	ENSCSAG00000004980	ENSCSAG00000004976	ENSCSAG00000004974	ENSCSAG00000018502 #22	ZNF43 (ENSCSAG00000004971)	ENSCSAG00000004967	ENSCSAG00000004964	ENSCSAG00000004956	ENSCSAG00000004945	ENSCSAG00000018504	ENSCSAG00000004935	ENSCSAG00000004928	ENSCSAG00000004924	ENSCSAG00000004919	ZNF724 (ENSCSAG00000004914)	ENSCSAG00000004910	ENSCSAG00000018506	ENSCSAG00000004906	ZNF681 (ENSCSAG00000004903)
Rhinopithecus	DUPLICATION
Rhinopithecus	ANCESTRAL SPECIES	112	ENSGT00940000155667	ENSGT01040000240503.C.m.b	ENSGT01040000240503.C.n	ENSGT00940000157555	ENSGT00940000155097	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00910000147782	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398.o #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a.c #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00940000159078
Black snub-nosed monkey	MODERN SPECIES	137	SELENOF (ENSRBIG00000026319)	SH3GLB1 (ENSRBIG00000027795)	ENSRBIG00000043193	ENSRBIG00000040098	ENSRBIG00000039377	CLCA4 (ENSRBIG00000031752)	CLCA1 (ENSRBIG00000043230)	CLCA2 (ENSRBIG00000031853) #7	ODF2L (ENSRBIG00000040478) #8	COL24A1 (ENSRBIG00000040549) #11	ZNHIT6 (ENSRBIG00000001418) #13	ENSRBIG00000029091	CCN1 (ENSRBIG00000038743) #15	DDAH1 (ENSRBIG00000034663) #18	BCL10 (ENSRBIG00000044051) #21	ENSRBIG00000032729 #22	SYDE2 (ENSRBIG00000034172) #24	DNAI3 (ENSRBIG00000034137) #25	ENSRBIG00000035958 #26	MCOLN2 (ENSRBIG00000032726) #27
Golden snub-nosed monkey	MODERN SPECIES	2362											ENSRROG00000028931 #11	ZNHIT6 (ENSRROG00000028580) #13	CCN1 (ENSRROG00000028951) #15	DDAH1 (ENSRROG00000009892) #18	BCL10 (ENSRROG00000044289) #21	ENSRROG00000027907 #22	SYDE2 (ENSRROG00000029434) #24	DNAI3 (ENSRROG00000030691) #25	ENSRROG00000040243 #26	MCOLN2 (ENSRROG00000036998) #27	ENSRROG00000035313 #28	SSX2IP (ENSRROG00000043233) #29	CTBS (ENSRROG00000027909) #30	SPATA1 (ENSRROG00000040432) #31	GNG5 (ENSRROG00000041242) #32	RPF1 (ENSRROG00000038090) #33	ENSRROG00000036333	DNASE2B (ENSRROG00000037799) #34	ENSRROG00000023758 #35	SAMD13 (ENSRROG00000042230) #36	PRKACB (ENSRROG00000022851) #37
Rhinopithecus	ANCESTRAL SPECIES	787															ENSGT00940000154453.b.a.b.b.b	ENSGT00390000017398.p #22	ENSGT00940000163744.b	ENSGT00940000153236.b.b.b.a.a.a.a.b
Black snub-nosed monkey	MODERN SPECIES	2714																ENSRBIG00000028719 #22
Golden snub-nosed monkey	MODERN SPECIES	1656												ZNF429 (ENSRROG00000044782)	ENSRROG00000042661	ENSRROG00000032726	ENSRROG00000042229	ENSRROG00000042207 #22	ZNF43 (ENSRROG00000029715)	ENSRROG00000041485	ENSRROG00000028857
Platyrrhini	ANCESTRAL SPECIES		ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00910000147782	ENSGT00940000155151.b #15	ENSGT00960000186836	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000161169 #37
Cebidae	ANCESTRAL SPECIES	1	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00910000147782	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000161169 #37
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	19	HS2ST1 (ENSCJAG00000038902)	ENSCJAG00000074244	SELENOF (ENSCJAG00000038701)	ENSCJAG00000072388	SH3GLB1 (ENSCJAG00000007335)	ENSCJAG00000007329	CLCA4 (ENSCJAG00000007319)	CLCA1 (ENSCJAG00000007285)	CLCA2 (ENSCJAG00000007251) #7	ODF2L (ENSCJAG00000007184) #8	COL24A1 (ENSCJAG00000007060) #11	ZNHIT6 (ENSCJAG00000007041) #13	CCN1 (ENSCJAG00000012726) #15	DDAH1 (ENSCJAG00000040455) #18	BCL10 (ENSCJAG00000052966) #21	ENSCJAG00000007022 #22	DNAI3 (ENSCJAG00000006895) #25	SYDE2 (ENSCJAG00000007003) #24	MCOLN2 (ENSCJAG00000006843) #27	LPAR3 (ENSCJAG00000039205) #28	SSX2IP (ENSCJAG00000007456) #29	CTBS (ENSCJAG00000007444) #30	SPATA1 (ENSCJAG00000007432) #31	ENSCJAG00000087345 #32	RPF1 (ENSCJAG00000007400) #33	DNASE2B (ENSCJAG00000007380) #34	ENSCJAG00000007377 #35	SAMD13 (ENSCJAG00000038186) #36	PRKACB (ENSCJAG00000007331) #37	TTLL7 (ENSCJAG00000007255)	ENSCJAG00000073777
Marmoset	MODERN SPECIES	21	KCNA5 (ENSCJAG00000068399)	KCNA1 (ENSCJAG00000068371)	KCNA6 (ENSCJAG00000061475)	ENSCJAG00000075610	ENSCJAG00000001647	ENSCJAG00000001628	FGF6 (ENSCJAG00000001613)	FGF23 (ENSCJAG00000069632)	TIGAR (ENSCJAG00000040111)	CCND2 (ENSCJAG00000001593)	ENSCJAG00000001586	ENSCJAG00000021822	PARP11 (ENSCJAG00000001570)	ENSCJAG00000082222	CRACR2A (ENSCJAG00000018917)	ENSCJAG00000063173 #22	PRMT8 (ENSCJAG00000018891)	ENSCJAG00000018882	TEAD4 (ENSCJAG00000018796)	ENSCJAG00000085073	FOXM1 (ENSCJAG00000018781)	RHNO1 (ENSCJAG00000018790)	TEX52 (ENSCJAG00000018779)	NRIP2 (ENSCJAG00000083523)	ITFG2 (ENSCJAG00000018765)	FKBP4 (ENSCJAG00000018746)	ENSCJAG00000006744	ENSCJAG00000076932	ENSCJAG00000064493	ENSCJAG00000079693	CACNA1C (ENSCJAG00000000732)
Cebidae_a	ANCESTRAL SPECIES		ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00910000147782	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT00390000013931.a.a	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B.w #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36
Bolivian squirrel monkey	MODERN SPECIES	45					CLCA4 (ENSSBOG00000029808)	CLCA1 (ENSSBOG00000031532)	CLCA2 (ENSSBOG00000034114) #7	ODF2L (ENSSBOG00000019975) #8	COL24A1 (ENSSBOG00000028125) #11	ZNHIT6 (ENSSBOG00000026850) #13	ENSSBOG00000030704	CCN1 (ENSSBOG00000018139) #15	DDAH1 (ENSSBOG00000029891) #18	ENSSBOG00000021699	BCL10 (ENSSBOG00000032733) #21	C1orf52 (ENSSBOG00000023463) #22	ENSSBOG00000031654	SYDE2 (ENSSBOG00000032922) #24	DNAI3 (ENSSBOG00000020387) #25	MCOLN3 (ENSSBOG00000031702) #26	MCOLN2 (ENSSBOG00000019614) #27	LPAR3 (ENSSBOG00000022469) #28	SSX2IP (ENSSBOG00000030187) #29	CTBS (ENSSBOG00000029974) #30	SPATA1 (ENSSBOG00000032732) #31	ENSSBOG00000025678 #32	RPF1 (ENSSBOG00000020439) #33	ENSSBOG00000029709	DNASE2B (ENSSBOG00000036044) #34	ENSSBOG00000023319 #35	SAMD13 (ENSSBOG00000035540) #36
Capuchin	MODERN SPECIES	261	HS2ST1 (ENSCCAG00000026104)	SELENOF (ENSCCAG00000033446)	ENSCCAG00000031456	ENSCCAG00000000976	SH3GLB1 (ENSCCAG00000029842)	ENSCCAG00000035676	CLCA4 (ENSCCAG00000027130)	CLCA1 (ENSCCAG00000032498)	CLCA2 (ENSCCAG00000022983) #7	ODF2L (ENSCCAG00000036639) #8	COL24A1 (ENSCCAG00000026567) #11	ZNHIT6 (ENSCCAG00000035034) #13	CCN1 (ENSCCAG00000022293) #15	DDAH1 (ENSCCAG00000031737) #18	BCL10 (ENSCCAG00000036016) #21	C1orf52 (ENSCCAG00000022391) #22	ENSCCAG00000032916	SYDE2 (ENSCCAG00000011416) #24	DNAI3 (ENSCCAG00000034917) #25	MCOLN3 (ENSCCAG00000024680) #26	MCOLN2 (ENSCCAG00000021351) #27	LPAR3 (ENSCCAG00000022881) #28	SSX2IP (ENSCCAG00000025619) #29	CTBS (ENSCCAG00000034072) #30	SPATA1 (ENSCCAG00000033239) #31	ENSCCAG00000025681 #32	RPF1 (ENSCCAG00000038077) #33	DNASE2B (ENSCCAG00000031055) #34	ENSCCAG00000021796 #35	ENSCCAG00000024817	SAMD13 (ENSCCAG00000024780) #36
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	1222												CCN1 (ENSANAG00000021011) #15	ENSANAG00000020702	DDAH1 (ENSANAG00000036589) #18	BCL10 (ENSANAG00000032404) #21	ENSANAG00000019838 #22	SYDE2 (ENSANAG00000037204) #24	ENSANAG00000037128	DNAI3 (ENSANAG00000033437) #25	MCOLN3 (ENSANAG00000014281) #26	MCOLN2 (ENSANAG00000035061) #27	LPAR3 (ENSANAG00000021394) #28	SSX2IP (ENSANAG00000028935) #29	ENSANAG00000034138 #30	SPATA1 (ENSANAG00000028513) #31	GNG5 (ENSANAG00000037163) #32	RPF1 (ENSANAG00000035706) #33	ENSANAG00000035698	DNASE2B (ENSANAG00000034051) #34	ENSANAG00000025747 #35	ENSANAG00000033696
Mas night monkey	MODERN SPECIES	1003		ENSANAG00000030795	ENSANAG00000026597	HTR1E (ENSANAG00000020260)	CGA (ENSANAG00000025451)	ZNF292 (ENSANAG00000023824)	SMIM8 (ENSANAG00000031913)	C6orf163 (ENSANAG00000020423)	ENSANAG00000036217	SLC35A1 (ENSANAG00000023414)	RARS2 (ENSANAG00000027711)	ORC3 (ENSANAG00000038422)	AKIRIN2 (ENSANAG00000030566)	ENSANAG00000027715	SPACA1 (ENSANAG00000022733)	ENSANAG00000022019 #22	RNGTT (ENSANAG00000022118)	ENSANAG00000001631	ENSANAG00000027710	SRSF12 (ENSANAG00000023238)	PM20D2 (ENSANAG00000028063)	GABRR2 (ENSANAG00000027407)	UBE2J1 (ENSANAG00000023523)	RRAGD (ENSANAG00000023087)	ENSANAG00000035891	ANKRD6 (ENSANAG00000035580)	LYRM2 (ENSANAG00000033734)	MDN1 (ENSANAG00000034484)	CASP8AP2 (ENSANAG00000021679)	GJA10 (ENSANAG00000024124)	BACH2 (ENSANAG00000020444)
Tarsier	MODERN SPECIES	5619											COL24A1 (ENSTSYG00000007947) #11	ZNHIT6 (ENSTSYG00000031685) #13	CCN1 (ENSTSYG00000004929) #15	DDAH1 (ENSTSYG00000036511) #18	BCL10 (ENSTSYG00000010772) #21	CUNH1orf52 (ENSTSYG00000035862) #22	SYDE2 (ENSTSYG00000008423) #24	WDR63 (ENSTSYG00000008813) #25	MCOLN3 (ENSTSYG00000008984) #26	MCOLN2 (ENSTSYG00000005578) #27	LPAR3 (ENSTSYG00000010815) #28	SSX2IP (ENSTSYG00000004276) #29	CTBS (ENSTSYG00000010036) #30	SPATA1 (ENSTSYG00000010029) #31	ENSTSYG00000027698 ##32	RPF1 (ENSTSYG00000009961) #33	DNASE2B (ENSTSYG00000013883) #34	ENSTSYG00000028321 #35	SAMD13 (ENSTSYG00000000398) #36
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Artiodactyla	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00910000147804	ENSGT00530000063936.b #36
Camelidae	ANCESTRAL SPECIES	11	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.d ##32	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36
Arabian camel	MODERN SPECIES	4	PKN2 (ENSCDRG00005014192)	LMO4 (ENSCDRG00005014134)	HS2ST1 (ENSCDRG00005014055)	SELENOF (ENSCDRG00005013974)	SH3GLB1 (ENSCDRG00005013701)	ENSCDRG00005013259	CLCA4 (ENSCDRG00005013128)	CLCA1 (ENSCDRG00005012990)	CLCA2 (ENSCDRG00005012881) #7	ODF2L (ENSCDRG00005012713) #8	COL24A1 (ENSCDRG00005012526) #11	ZNHIT6 (ENSCDRG00005012303) #13	CCN1 (ENSCDRG00005012224) #15	DDAH1 (ENSCDRG00005011995) #18	BCL10 (ENSCDRG00005011941) #21	C1orf52 (ENSCDRG00005011873) #22	SYDE2 (ENSCDRG00005011826) #24	DNAI3 (ENSCDRG00005011768) #25	MCOLN3 (ENSCDRG00005011428) #26	MCOLN2 (ENSCDRG00005011158) #27	LPAR3 (ENSCDRG00005011117) #28	SSX2IP (ENSCDRG00005011054) #29	CTBS (ENSCDRG00005011010) #30	SPATA1 (ENSCDRG00005010904) #31	GNG5 (ENSCDRG00005010830) #32	RPF1 (ENSCDRG00005010749) #33	DNASE2B (ENSCDRG00005010674) #34	ENSCDRG00005010589 #35	ENSCDRG00005010571	SAMD13 (ENSCDRG00005010489) #36	ENSCDRG00005010452
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Cetacea	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00950000186157	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Odontoceti	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00950000186157	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000010089.e.a	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37	ENSGT00940000159078
Dolphin	MODERN SPECIES	1393												ZNHIT6 (ENSTTRG00000001331) #13	CYR61 (ENSTTRG00000001330) #15	DDAH1 (ENSTTRG00000001329) #18	BCL10 (ENSTTRG00000001328) #21	CUNH1orf52 (ENSTTRG00000001327) #22	SYDE2 (ENSTTRG00000001326) #24	DNAI3 (ENSTTRG00000001325) #25
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000154276.jb.a.c.a.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT01100000263605.b.a	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37	ENSGT00940000159078	ENSGT01030000235287
Vaquita	MODERN SPECIES		SH3GLB1 (ENSPSNG00000012379)	ENSPSNG00000012254	ENSPSNG00000012179	ENSPSNG00000012108	CLCA4 (ENSPSNG00000011942)	CLCA1 (ENSPSNG00000011200)	CLCA2 (ENSPSNG00000010949) #7	ODF2L (ENSPSNG00000010772) #8	ENSPSNG00000010684	ENSPSNG00000010645	COL24A1 (ENSPSNG00000010075) #11	ZNHIT6 (ENSPSNG00000009894) #13	CCN1 (ENSPSNG00000009783) #15	DDAH1 (ENSPSNG00000004030) #18	BCL10 (ENSPSNG00000004004) #21	C1orf52 (ENSPSNG00000003984) #22	SYDE2 (ENSPSNG00000003962) #24	DNAI3 (ENSPSNG00000003943) #25	MCOLN3 (ENSPSNG00000003890) #26	MCOLN2 (ENSPSNG00000003843) #27	LPAR3 (ENSPSNG00000003830) #28	SSX2IP (ENSPSNG00000003809) #29	GNG5 (ENSPSNG00000003794) #32	RPF1 (ENSPSNG00000003772) #33	ENSPSNG00000003753 #34	ENSPSNG00000003738 #35	SAMD13 (ENSPSNG00000003722) #36	PRKACB (ENSPSNG00000003284) #37	TTLL7 (ENSPSNG00000003000)	ENSPSNG00000002961	ADGRL2 (ENSPSNG00000002844)
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000154276.jb.a.c.a.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT01100000263605.b.a	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000010089.e.a	ENSGT00910000145621	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37	ENSGT00940000159078
Beluga whale	MODERN SPECIES	74	ENSDLEG00000017239	SELENOF (ENSDLEG00000017224)	SH3GLB1 (ENSDLEG00000017190)	ENSDLEG00000017178	ENSDLEG00000017169	CLCA4 (ENSDLEG00000017123)	CLCA1 (ENSDLEG00000016981)	CLCA2 (ENSDLEG00000016914) #7	ODF2L (ENSDLEG00000016888) #8	ENSDLEG00000016875	ENSDLEG00000016857 #11	ZNHIT6 (ENSDLEG00000016847) #13	CYR61 (ENSDLEG00000016833) #15	DDAH1 (ENSDLEG00000016798) #18	BCL10 (ENSDLEG00000016793) #21	CUNH1orf52 (ENSDLEG00000016784) #22	SYDE2 (ENSDLEG00000016765) #24	DNAI3 (ENSDLEG00000016672) #25	MCOLN3 (ENSDLEG00000016634) #26	MCOLN2 (ENSDLEG00000016543) #27	LPAR3 (ENSDLEG00000016529) #28	SSX2IP (ENSDLEG00000016495) #29	ENSDLEG00000016476	ENSDLEG00000016469	RPF1 (ENSDLEG00000016438) #33	DNASE2B (ENSDLEG00000016427) #34	ENSDLEG00000016414 #35	SAMD13 (ENSDLEG00000016382) #36	PRKACB (ENSDLEG00000016303) #37	TTLL7 (ENSDLEG00000016218)	ENSDLEG00000016193
Narwhal	MODERN SPECIES	304	ENSMMNG00015006184	ENSMMNG00015006203	CLCA4 (ENSMMNG00015006219)	CLCA1 (ENSMMNG00015006324)	CLCA2 (ENSMMNG00015006483) #7	ODF2L (ENSMMNG00015006542) #8	ENSMMNG00015006593	COL24A1 (ENSMMNG00015006630) #11	ENSMMNG00015006664	ZNHIT6 (ENSMMNG00015006688) #13	CCN1 (ENSMMNG00015006718) #15	ENSMMNG00015006737 #16	ENSMMNG00015006746	DDAH1 (ENSMMNG00015006769) #18	BCL10 (ENSMMNG00015006803) #21	C1orf52 (ENSMMNG00015006824) #22	SYDE2 (ENSMMNG00015006844) #24	DNAI3 (ENSMMNG00015006897) #25	MCOLN3 (ENSMMNG00015006977) #26	MCOLN2 (ENSMMNG00015007034) #27	LPAR3 (ENSMMNG00015007073) #28	SSX2IP (ENSMMNG00015007092) #29	ENSMMNG00015007123	ENSMMNG00015007171	RPF1 (ENSMMNG00015007188) #33	DNASE2B (ENSMMNG00015007213) #34	ENSMMNG00015007239 #35	SAMD13 (ENSMMNG00015007257) #36	ENSMMNG00015007272	PRKACB (ENSMMNG00015007361) #37	TTLL7 (ENSMMNG00015007554)
Sperm whale	MODERN SPECIES	15	LMO4 (ENSPCTG00005009288)	HS2ST1 (ENSPCTG00005009338)	SELENOF (ENSPCTG00005009387)	SH3GLB1 (ENSPCTG00005009480)	ENSPCTG00005009928	ENSPCTG00005009991	CLCA4 (ENSPCTG00005010077)	CLCA1 (ENSPCTG00005010226)	CLCA2 (ENSPCTG00005010389) #7	ODF2L (ENSPCTG00005010473) #8	COL24A1 (ENSPCTG00005010594) #11	ENSPCTG00005010695	ZNHIT6 (ENSPCTG00005010735) #13	CCN1 (ENSPCTG00005010887) #15	BCL10 (ENSPCTG00005010972) #21	C4H1orf52 (ENSPCTG00005011208) #22	SYDE2 (ENSPCTG00005011255) #24	DNAI3 (ENSPCTG00005011337) #25	MCOLN3 (ENSPCTG00005011843) #26	MCOLN2 (ENSPCTG00005012138) #27	LPAR3 (ENSPCTG00005012306) #28	SSX2IP (ENSPCTG00005012325) #29	ENSPCTG00005012379	ENSPCTG00005012400	ENSPCTG00005012437 #31	GNG5 (ENSPCTG00005012478) #32	RPF1 (ENSPCTG00005012513) #33	ENSPCTG00005012591 #34	ENSPCTG00005012636 #35	SAMD13 (ENSPCTG00005012711) #36	PRKACB (ENSPCTG00005012881) #37
Blue whale	MODERN SPECIES		ENSBMSG00010011649	ENSBMSG00010011641	ENSBMSG00010011631	ENSBMSG00010011618	ENSBMSG00010011578	CLCA1 (ENSBMSG00010011556)	CLCA2 (ENSBMSG00010011495) #7	ODF2L (ENSBMSG00010011443) #8	ENSBMSG00010011419	COL24A1 (ENSBMSG00010011347) #11	ZNHIT6 (ENSBMSG00010011279) #13	CCN1 (ENSBMSG00010011251) #15	ENSBMSG00010011239 #16	DDAH1 (ENSBMSG00010011208) #18	ENSBMSG00010011187 #21	C1orf52 (ENSBMSG00010011167) #22	SYDE2 (ENSBMSG00010011151) #24	DNAI3 (ENSBMSG00010011066) #25	MCOLN3 (ENSBMSG00010011002) #26	MCOLN2 (ENSBMSG00010010954) #27	ENSBMSG00010010924	LPAR3 (ENSBMSG00010010913) #28	SSX2IP (ENSBMSG00010010888) #29	ENSBMSG00010010877	SPATA1 (ENSBMSG00010010864) #31	ENSBMSG00010010850 ##32	RPF1 (ENSBMSG00010010838) #33	ENSBMSG00010010830 #34	ENSBMSG00010010810 #35	ENSBMSG00010010794	SAMD13 (ENSBMSG00010010774) #36
Pecora	ANCESTRAL SPECIES	2	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT01000000215412	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Yarkand deer	MODERN SPECIES	12	ENSCHYG00000017416	ENSCHYG00000017521	ENSCHYG00000017942	CLCA4 (ENSCHYG00000017997)	ENSCHYG00000018086	CLCA1 (ENSCHYG00000018130)	CLCA2 (ENSCHYG00000018274) #7	ODF2L (ENSCHYG00000018506) #8	COL24A1 (ENSCHYG00000019031) #11	ZNHIT6 (ENSCHYG00000019277) #13	CCN1 (ENSCHYG00000019490) #15	ENSCHYG00000019543	ENSCHYG00000019567	DDAH1 (ENSCHYG00000019587) #18	BCL10 (ENSCHYG00000019711) #21	C1orf52 (ENSCHYG00000019772) #22	SYDE2 (ENSCHYG00000019844) #24	DNAI3 (ENSCHYG00000019958) #25	MCOLN3 (ENSCHYG00000021236) #26	MCOLN2 (ENSCHYG00000021424) #27	LPAR3 (ENSCHYG00000021602) #28	ENSCHYG00000021637 #29	CTBS (ENSCHYG00000021813) #30	SPATA1 (ENSCHYG00000021860) #31	ENSCHYG00000022011 #32	RPF1 (ENSCHYG00000022044) #33	DNASE2B (ENSCHYG00000022151) #34	ENSCHYG00000022258 #35	ENSCHYG00000022387	PRKACB (ENSCHYG00000022683) #37	ENSCHYG00000024821
Percora_a	ANCESTRAL SPECIES	1	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT01000000215412	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Bovidae	ANCESTRAL SPECIES	1	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT01000000215412	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Caprinae	ANCESTRAL SPECIES	2	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT01000000215412	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00910000147804	ENSGT00530000063936.b #36
Goat	DUPLICATION
Goat	MODERN SPECIES	22	ENSCHIG00000018965	SH3GLB1 (ENSCHIG00000026662)	ENSCHIG00000007867	ENSCHIG00000002248	CLCA4 (ENSCHIG00000021877)	CLCA1 (ENSCHIG00000011719)	CLCA2 (ENSCHIG00000027130) #7	ODF2L (ENSCHIG00000025854) #8	ENSCHIG00000017228	COL24A1 (ENSCHIG00000020640) #11	ZNHIT6 (ENSCHIG00000020100) #13	CCN1 (ENSCHIG00000027269) #15	ENSCHIG00000011990	DDAH1 (ENSCHIG00000024596) #18	BCL10 (ENSCHIG00000011561) #21	ENSCHIG00000026751 #22	SYDE2 (ENSCHIG00000014781) #24	DNAI3 (ENSCHIG00000017079) #25	MCOLN3 (ENSCHIG00000018773) #26	MCOLN2 (ENSCHIG00000008729) #27	LPAR3 (ENSCHIG00000017316) #28	SSX2IP (ENSCHIG00000025764) #29	CTBS (ENSCHIG00000022826) #30	SPATA1 (ENSCHIG00000004028) #31	GNG5 (ENSCHIG00000016183) #32	ENSCHIG00000012566 #33	DNASE2B (ENSCHIG00000018531) #34	ENSCHIG00000025541 #35	ENSCHIG00000014514	PRKACB (ENSCHIG00000024391) #37	TTLL7 (ENSCHIG00000017102)
Goat	MODERN SPECIES	22	ENSCHIG00000009426	ENSCHIG00000016560	ENSCHIG00000010218	CD1D (ENSCHIG00000008779)	ENSCHIG00000012337	KIRREL1 (ENSCHIG00000021405)	ENSCHIG00000027085	ENSCHIG00000015324	ENSCHIG00000014091	ENSCHIG00000019069	FCRL4 (ENSCHIG00000001070)	ENSCHIG00000025439	ENSCHIG00000011451	ETV3 (ENSCHIG00000017949)	ENSCHIG00000023056	ENSCHIG00000009592 #22	ARHGEF11 (ENSCHIG00000025394)	LRRC71 (ENSCHIG00000005840)	PEAR1 (ENSCHIG00000024120)	NTRK1 (ENSCHIG00000023266)	INSRR (ENSCHIG00000020115)	SH2D2A (ENSCHIG00000019998)	PRCC (ENSCHIG00000024652)	HDGF (ENSCHIG00000017076)	MRPL24 (ENSCHIG00000015041)	METTL25B (ENSCHIG00000022856)	ISG20L2 (ENSCHIG00000024024)	CRABP2 (ENSCHIG00000009097)	NES (ENSCHIG00000026388)	BCAN (ENSCHIG00000011650)	HAPLN2 (ENSCHIG00000025407)
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020006050	HS2ST1 (ENSOARG00020005954)	SELENOF (ENSOARG00020005902)	SH3GLB1 (ENSOARG00020005783)	ENSOARG00020003537	ENSOARG00020002384	CLCA4 (ENSOARG00020002227)	CLCA1 (ENSOARG00020002201)	CLCA2 (ENSOARG00020002169) #7	ODF2L (ENSOARG00020002095) #8	COL24A1 (ENSOARG00020002041) #11	CCN1 (ENSOARG00020001971) #15	DDAH1 (ENSOARG00020001916) #18	ENSOARG00020001899	BCL10 (ENSOARG00020001886) #21	C1orf52 (ENSOARG00020001875) #22	SYDE2 (ENSOARG00020001859) #24	DNAI3 (ENSOARG00020001533) #25	ENSOARG00020001462	MCOLN3 (ENSOARG00020001362) #26	MCOLN2 (ENSOARG00020001324) #27	LPAR3 (ENSOARG00020001315) #28	SSX2IP (ENSOARG00020001297) #29	CTBS (ENSOARG00020001255) #30	SPATA1 (ENSOARG00020001225) #31	GNG5 (ENSOARG00020001205) #32	RPF1 (ENSOARG00020001191) #33	DNASE2B (ENSOARG00020001163) #34	ENSOARG00020001133 #35	ENSOARG00020001115	SAMD13 (ENSOARG00020001103) #36
Bovinae	ANCESTRAL SPECIES	1	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT01000000215412	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
American bison	MODERN SPECIES	3325	HS2ST1 (ENSBBBG00000006101)	SELENOF (ENSBBBG00000008413)	SH3GLB1 (ENSBBBG00000007287)	ENSBBBG00000023469	ENSBBBG00000008313	CLCA4 (ENSBBBG00000023614)	CLCA1 (ENSBBBG00000006178)	CLCA2 (ENSBBBG00000023667) #7	ODF2L (ENSBBBG00000023750) #8	COL24A1 (ENSBBBG00000007290) #11	ZNHIT6 (ENSBBBG00000006216) #13	CCN1 (ENSBBBG00000023910) #15	ENSBBBG00000023925	DDAH1 (ENSBBBG00000023962) #18	BCL10 (ENSBBBG00000023973) #21	C1orf52 (ENSBBBG00000023979) #22	SYDE2 (ENSBBBG00000008975) #24	DNAI3 (ENSBBBG00000024063) #25	MCOLN3 (ENSBBBG00000024117) #26	MCOLN2 (ENSBBBG00000024164) #27	LPAR3 (ENSBBBG00000024176) #28	SSX2IP (ENSBBBG00000008990) #29	CTBS (ENSBBBG00000024262) #30	SPATA1 (ENSBBBG00000024290) #31	ENSBBBG00000024302 #32	RPF1 (ENSBBBG00000008889) #33	DNASE2B (ENSBBBG00000006341) #34	ENSBBBG00000006366 #35	SAMD13 (ENSBBBG00000024450) #36	ENSBBBG00000024455	PRKACB (ENSBBBG00000024703) #37
Bos	ANCESTRAL SPECIES		ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT01000000215412	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Bos_b	ANCESTRAL SPECIES	1	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.b.b.b.b.a.b.a.b.a.a	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT01000000215412	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Hybrid Bos Indicus	MODERN SPECIES	22	SH3GLB1 (ENSBIXG00005029220)	ENSBIXG00005001721	ENSBIXG00005001767	ENSBIXG00005029153	CLCA4 (ENSBIXG00005029144)	CLCA1 (ENSBIXG00005005168)	CLCA2 (ENSBIXG00005029083) #7	ENSBIXG00005001995	ODF2L (ENSBIXG00005005132) #8	COL24A1 (ENSBIXG00005028988) #11	ZNHIT6 (ENSBIXG00005002133) #13	CCN1 (ENSBIXG00005028896) #15	ENSBIXG00005002260	DDAH1 (ENSBIXG00005002285) #18	BCL10 (ENSBIXG00005028824) #21	C1orf52 (ENSBIXG00005006646) #22	SYDE2 (ENSBIXG00005028777) #24	DNAI3 (ENSBIXG00005028759) #25	ENSBIXG00005028687	MCOLN3 (ENSBIXG00005028662) #26	MCOLN2 (ENSBIXG00005028583) #27	LPAR3 (ENSBIXG00005028548) #28	SSX2IP (ENSBIXG00005028521) #29	CTBS (ENSBIXG00005028483) #30	SPATA1 (ENSBIXG00005028480) #31	ENSBIXG00005028437	ENSBIXG00005004893 #32	RPF1 (ENSBIXG00005028403) #33	ENSBIXG00005028353 #35	DNASE2B (ENSBIXG00005004867) #34	ENSBIXG00005028288 #36
Cow	MODERN SPECIES	22	HS2ST1 (ENSBTAG00000017595)	SELENOF (ENSBTAG00000052268)	SH3GLB1 (ENSBTAG00000031171)	ENSBTAG00000051311	ENSBTAG00000021501	CLCA3 (ENSBTAG00000016712)	CLCA4 (ENSBTAG00000017357)	CLCA1 (ENSBTAG00000008161)	CLCA2 (ENSBTAG00000038215) #7	ODF2L (ENSBTAG00000012907) #8	ENSBTAG00000048312 #11	ZNHIT6 (ENSBTAG00000021051) #13	CCN1 (ENSBTAG00000009844) #15	DDAH1 (ENSBTAG00000034776) #18	BCL10 (ENSBTAG00000013851) #21	C3H1orf52 (ENSBTAG00000016326) #22	SYDE2 (ENSBTAG00000003444) #24	DNAI3 (ENSBTAG00000013778) #25	MCOLN3 (ENSBTAG00000016982) #26	MCOLN2 (ENSBTAG00000046773) #27	LPAR3 (ENSBTAG00000003791) #28	SSX2IP (ENSBTAG00000018942) #29	CTBS (ENSBTAG00000005782) #30	SPATA1 (ENSBTAG00000020010) #31	GNG5 (ENSBTAG00000008122) #32	RPF1 (ENSBTAG00000008118) #33	UOX (ENSBTAG00000024255) #35	DNASE2B (ENSBTAG00000010445) #34	ENSBTAG00000053100	SAMD13 (ENSBTAG00000053482) #36	SAMD13 (ENSBTAG00000007724)
Bos_a	ANCESTRAL SPECIES	1	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT01000000215412	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000161169 #37	ENSGT00940000159078
Domestic yak	MODERN SPECIES	22	SELENOF (ENSBGRG00000004000)	SH3GLB1 (ENSBGRG00000004071)	ENSBGRG00000004351	CLCA4 (ENSBGRG00000004774)	CLCA1 (ENSBGRG00000006534)	CLCA2 (ENSBGRG00000006661) #7	ENSBGRG00000006706	ODF2L (ENSBGRG00000006729) #8	COL24A1 (ENSBGRG00000006871) #11	ENSBGRG00000000235	ZNHIT6 (ENSBGRG00000000263) #13	CCN1 (ENSBGRG00000000313) #15	ENSBGRG00000000337	DDAH1 (ENSBGRG00000000347) #18	BCL10 (ENSBGRG00000000384) #21	C1orf52 (ENSBGRG00000000411) #22	SYDE2 (ENSBGRG00000000456) #24	DNAI3 (ENSBGRG00000000494) #25	MCOLN3 (ENSBGRG00000000709) #26	MCOLN2 (ENSBGRG00000000755) #27	ENSBGRG00000000797	LPAR3 (ENSBGRG00000000803) #28	SSX2IP (ENSBGRG00000000833) #29	CTBS (ENSBGRG00000000887) #30	SPATA1 (ENSBGRG00000000917) #31	ENSBGRG00000000963 #32	RPF1 (ENSBGRG00000000983) #33	ENSBGRG00000001021 #35	DNASE2B (ENSBGRG00000001063) #34	ENSBGRG00000001096 #36	PRKACB (ENSBGRG00000001167) #37
Wild yak	MODERN SPECIES	151	HS2ST1 (ENSBMUG00000017400)	SELENOF (ENSBMUG00000017480)	SH3GLB1 (ENSBMUG00000017608)	ENSBMUG00000017730	ENSBMUG00000017762	CLCA4 (ENSBMUG00000017782)	CLCA1 (ENSBMUG00000017812)	CLCA2 (ENSBMUG00000017843) #7	ODF2L (ENSBMUG00000017919) #8	COL24A1 (ENSBMUG00000017985) #11	ENSBMUG00000018023	ZNHIT6 (ENSBMUG00000018058) #13	CCN1 (ENSBMUG00000018082) #15	DDAH1 (ENSBMUG00000018146) #18	BCL10 (ENSBMUG00000018176) #21	C1orf52 (ENSBMUG00000018196) #22	SYDE2 (ENSBMUG00000018219) #24	DNAI3 (ENSBMUG00000018237) #25	MCOLN3 (ENSBMUG00000018289) #26
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	339	HS2ST1 (ENSMMSG00000004654)	SELENOF (ENSMMSG00000004702)	SH3GLB1 (ENSMMSG00000004787)	ENSMMSG00000005173	ENSMMSG00000005817	CLCA4 (ENSMMSG00000006195)	CLCA1 (ENSMMSG00000006239)	CLCA2 (ENSMMSG00000006290) #7	ODF2L (ENSMMSG00000006331) #8	COL24A1 (ENSMMSG00000006437) #11	ZNHIT6 (ENSMMSG00000006731) #13	CCN1 (ENSMMSG00000006870) #15	ENSMMSG00000006904	DDAH1 (ENSMMSG00000006918) #18	BCL10 (ENSMMSG00000006944) #21	C1orf52 (ENSMMSG00000006971) #22	SYDE2 (ENSMMSG00000006993) #24	DNAI3 (ENSMMSG00000007042) #25	MCOLN3 (ENSMMSG00000007252) #26	MCOLN2 (ENSMMSG00000007452) #27	LPAR3 (ENSMMSG00000007558) #28	SSX2IP (ENSMMSG00000007576) #29	CTBS (ENSMMSG00000007643) #30	ENSMMSG00000007667 #31	ENSMMSG00000007684 #32	ENSMMSG00000007703 #33	DNASE2B (ENSMMSG00000007733) #34	ENSMMSG00000007774 #35	ENSMMSG00000007862	SAMD13 (ENSMMSG00000007874) #36	PRKACB (ENSMMSG00000007994) #37
Siberian musk deer	MODERN SPECIES	243														ENSMMSG00000010912	ENSMMSG00000010903	ENSMMSG00000010889 #22	SRBD1 (ENSMMSG00000010782)	PRKCE (ENSMMSG00000010644)	ENSMMSG00000010613	EPAS1 (ENSMMSG00000010543)	TMEM247 (ENSMMSG00000010509)	ATP6V1E2 (ENSMMSG00000010493)	RHOQ (ENSMMSG00000010463)	PIGF (ENSMMSG00000010411)	CRIPT (ENSMMSG00000010380)	SOCS5 (ENSMMSG00000010366)	ENSMMSG00000010348	MCFD2 (ENSMMSG00000010275)	TTC7A (ENSMMSG00000010218)	STPG4 (ENSMMSG00000010164)	CALM2 (ENSMMSG00000010115)
Suina	ANCESTRAL SPECIES	32	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26
Pig	MODERN SPECIES	12	ENSSSCG00000047605	HS2ST1 (ENSSSCG00000022032)	SELENOF (ENSSSCG00000030125)	SH3GLB1 (ENSSSCG00000006930)	ENSSSCG00000059930	ENSSSCG00000006932	CLCA1 (ENSSSCG00000006933)	CLCA2 (ENSSSCG00000006935) #7	ODF2L (ENSSSCG00000006936) #8	COL24A1 (ENSSSCG00000031738) #11	ZNHIT6 (ENSSSCG00000006939) #13	CCN1 (ENSSSCG00000006940) #15	ENSSSCG00000056532 #16	DDAH1 (ENSSSCG00000040735) #18	BCL10 (ENSSSCG00000025691) #21	C1orf52 (ENSSSCG00000026772) #22	SYDE2 (ENSSSCG00000006947) #24	DNAI3 (ENSSSCG00000006950) #25	MCOLN3 (ENSSSCG00000023745) #26
Chacoan peccary	MODERN SPECIES	216	PKN2 (ENSCWAG00000014683)	ENSCWAG00000014846	HS2ST1 (ENSCWAG00000014885)	SELENOF (ENSCWAG00000014949)	SH3GLB1 (ENSCWAG00000015014)	ENSCWAG00000015195	ENSCWAG00000015913	CLCA1 (ENSCWAG00000016019)	CLCA2 (ENSCWAG00000016125) #7	ODF2L (ENSCWAG00000016227) #8	COL24A1 (ENSCWAG00000016291) #11	ZNHIT6 (ENSCWAG00000016707) #13	CCN1 (ENSCWAG00000016845) #15	DDAH1 (ENSCWAG00000016873) #18	BCL10 (ENSCWAG00000016929) #21	C1orf52 (ENSCWAG00000016957) #22	SYDE2 (ENSCWAG00000016990) #24	DNAI3 (ENSCWAG00000017052) #25	PCDH20 (ENSCWAG00000017337)	TDRD3 (ENSCWAG00000017371)	ENSCWAG00000017495	DIAPH3 (ENSCWAG00000017632)	ENSCWAG00000019391	ENSCWAG00000019419	PCDH17 (ENSCWAG00000019432)	ENSCWAG00000019461	ENSCWAG00000019477	ENSCWAG00000019495	OLFM4 (ENSCWAG00000019527)	ENSCWAG00000019571	PCDH8 (ENSCWAG00000000054)
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b #36
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b #36
Equus	ANCESTRAL SPECIES	3	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416.j	ENSGT00940000160416.i.b	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00940000161169 #37	ENSGT00940000159078
Donkey	MODERN SPECIES	7	SH3GLB1 (ENSEASG00005013235)	ENSEASG00005013238	ENSEASG00005013293	ENSEASG00005014000	ENSEASG00005032323	ENSEASG00005013994	CLCA1 (ENSEASG00005014026)	CLCA2 (ENSEASG00005014061) #7	ODF2L (ENSEASG00005014068) #8	COL24A1 (ENSEASG00005024938) #11	ZNHIT6 (ENSEASG00005014084) #13	CCN1 (ENSEASG00005014085) #15	ENSEASG00005034815 #16	DDAH1 (ENSEASG00005014087) #18	BCL10 (ENSEASG00005014089) #21	C1orf52 (ENSEASG00005014090) #22	SYDE2 (ENSEASG00005023929) #24	DNAI3 (ENSEASG00005014094) #25	MCOLN3 (ENSEASG00005014101) #26	MCOLN2 (ENSEASG00005014110) #27	LPAR3 (ENSEASG00005014129) #28	SSX2IP (ENSEASG00005014134) #29	CTBS (ENSEASG00005014138) #30	SPATA1 (ENSEASG00005014155) #31	ENSEASG00005033635	RPF1 (ENSEASG00005014158) #33	ENSEASG00005014161 #35	DNASE2B (ENSEASG00005014162) #34	ENSEASG00005024895	PRKACB (ENSEASG00005014168) #37	TTLL7 (ENSEASG00005014170)
Horse	MODERN SPECIES	26	ENSECAG00000052391	LMO4 (ENSECAG00000025150)	HS2ST1 (ENSECAG00000000800)	SH3GLB1 (ENSECAG00000009160)	ENSECAG00000014656	ENSECAG00000017843	ENSECAG00000035060	CLCA1 (ENSECAG00000057201)	CLCA2 (ENSECAG00000020901) #7	ODF2L (ENSECAG00000022058) #8	COL24A1 (ENSECAG00000023199) #11	ZNHIT6 (ENSECAG00000024978) #13	CCN1 (ENSECAG00000024993) #15	DDAH1 (ENSECAG00000024997) #18	BCL10 (ENSECAG00000025005) #21	C5H1orf52 (ENSECAG00000025029) #22	SYDE2 (ENSECAG00000025133) #24	DNAI3 (ENSECAG00000000764) #25	MCOLN3 (ENSECAG00000007249) #26	MCOLN2 (ENSECAG00000011008) #27	LPAR3 (ENSECAG00000049816) #28	SSX2IP (ENSECAG00000012872) #29	ENSECAG00000048925	ENSECAG00000056260	CTBS (ENSECAG00000015643) #30	SPATA1 (ENSECAG00000016351) #31	GNG5 (ENSECAG00000048494) #32	RPF1 (ENSECAG00000019661) #33	UOX (ENSECAG00000021582) #35	DNASE2B (ENSECAG00000020335) #34	ENSECAG00000028442
Chiroptera	ANCESTRAL SPECIES		ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b #36
Megabat	MODERN SPECIES	1749													CCN1 (ENSPVAG00000002811) #15	DDAH1 (ENSPVAG00000002809) #18	BCL10 (ENSPVAG00000002808) #21	C1orf52 (ENSPVAG00000002806) #22
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b #36
Greater horseshoe bat	DUPLICATION
Greater horseshoe bat	MODERN SPECIES	11	IQSEC1 (ENSRFEG00010004769)	ENSRFEG00010004850	NUP210 (ENSRFEG00010004861)	ENSRFEG00010004889	ENSRFEG00010004894	FBLN2 (ENSRFEG00010004908)	WNT7A (ENSRFEG00010004927)	GK5 (ENSRFEG00010004962)	XRN1 (ENSRFEG00010004992)	ATR (ENSRFEG00010005072)	PLS1 (ENSRFEG00010005106)	TRPC1 (ENSRFEG00010005127)	PCOLCE2 (ENSRFEG00010005148)	PAQR9 (ENSRFEG00010005166)	U2SURP (ENSRFEG00010005180)	ENSRFEG00010005199 #22	CHST2 (ENSRFEG00010005206)	SLC9A9 (ENSRFEG00010005221)	DIPK2A (ENSRFEG00010005250)	ENSRFEG00010005260	PLOD2 (ENSRFEG00010005288)	PLSCR4 (ENSRFEG00010005346)	ENSRFEG00010005376	PLSCR1 (ENSRFEG00010005408)	PLSCR5 (ENSRFEG00010005460)	ZIC4 (ENSRFEG00010005534)	ZIC1 (ENSRFEG00010005593)	ENSRFEG00010005605	AGTR1 (ENSRFEG00010005628)	CPB1 (ENSRFEG00010005647)	CPA3 (ENSRFEG00010005703)
Greater horseshoe bat	MODERN SPECIES	27	LMO4 (ENSRFEG00010011036)	HS2ST1 (ENSRFEG00010010982)	SELENOF (ENSRFEG00010010937)	SH3GLB1 (ENSRFEG00010010748)	ENSRFEG00010010677	CLCA4 (ENSRFEG00010010608)	CLCA1 (ENSRFEG00010010535)	CLCA2 (ENSRFEG00010010308) #7	ODF2L (ENSRFEG00010010033) #8	ENSRFEG00010009977	COL24A1 (ENSRFEG00010009929) #11	ZNHIT6 (ENSRFEG00010009748) #13	CCN1 (ENSRFEG00010009708) #15	DDAH1 (ENSRFEG00010009596) #18	BCL10 (ENSRFEG00010009517) #21	ENSRFEG00010009469 #22	SYDE2 (ENSRFEG00010009428) #24	DNAI3 (ENSRFEG00010009062) #25	MCOLN3 (ENSRFEG00010008879) #26	MCOLN2 (ENSRFEG00010008712) #27	LPAR3 (ENSRFEG00010008696) #28	SSX2IP (ENSRFEG00010008650) #29	ENSRFEG00010008577 #30	ENSRFEG00010008537 #30	SPATA1 (ENSRFEG00010008499) #31	GNG5 (ENSRFEG00010008455) #32	ENSRFEG00010008327 #33	DNASE2B (ENSRFEG00010008256) #34	ENSRFEG00010008224 #35	ENSRFEG00010008199	ENSRFEG00010008163
Carnivora	ANCESTRAL SPECIES	1	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Felidae	ANCESTRAL SPECIES	10	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b.c #36	ENSGT00990000205119
Panthera	ANCESTRAL SPECIES	4	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b.c #36	ENSGT00990000205119
Panthera_a	ANCESTRAL SPECIES	11	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b.c #36	ENSGT00990000205119
lion	MODERN SPECIES	8	HS2ST1 (ENSPLOG00000008504)	H2AZ1 (ENSPLOG00000008536)	SELENOF (ENSPLOG00000008569)	SH3GLB1 (ENSPLOG00000008636)	ENSPLOG00000008847	CLCA4 (ENSPLOG00000009130)	CLCA1 (ENSPLOG00000009243)	CLCA2 (ENSPLOG00000009343) #7	ODF2L (ENSPLOG00000009448) #8	COL24A1 (ENSPLOG00000009722) #11	ZNHIT6 (ENSPLOG00000009990) #13	CCN1 (ENSPLOG00000010073) #15	ENSPLOG00000010159 #16	DDAH1 (ENSPLOG00000010185) #18	BCL10 (ENSPLOG00000010271) #21	C1orf52 (ENSPLOG00000010306) #22	SYDE2 (ENSPLOG00000010350) #24	DNAI3 (ENSPLOG00000010446) #25	ENSPLOG00000010679	MCOLN3 (ENSPLOG00000010724) #26	MCOLN2 (ENSPLOG00000010836) #27	LPAR3 (ENSPLOG00000010887) #28	SSX2IP (ENSPLOG00000005570) #29	CTBS (ENSPLOG00000005615) #30	SPATA1 (ENSPLOG00000005659) #31	GNG5 (ENSPLOG00000005675) #32	RPF1 (ENSPLOG00000005694) #33	DNASE2B (ENSPLOG00000005726) #34	ENSPLOG00000005767 #35	SAMD13 (ENSPLOG00000005808) #36	ENSPLOG00000005835
leopard	MODERN SPECIES	62	HS2ST1 (ENSPPRG00000001594)	SELENOF (ENSPPRG00000003036)	SH3GLB1 (ENSPPRG00000005342)	ENSPPRG00000008796	CLCA4 (ENSPPRG00000010047)	CLCA1 (ENSPPRG00000010379)	CLCA2 (ENSPPRG00000016194) #7	ODF2L (ENSPPRG00000024565) #8	ENSPPRG00000024439	COL24A1 (ENSPPRG00000024037) #11	ZNHIT6 (ENSPPRG00000023340) #13	CCN1 (ENSPPRG00000023322) #15	ENSPPRG00000021077 #16	DDAH1 (ENSPPRG00000000442) #18	BCL10 (ENSPPRG00000000878) #21	C1orf52 (ENSPPRG00000001522) #22	SYDE2 (ENSPPRG00000002218) #24	DNAI3 (ENSPPRG00000004873) #25	MCOLN3 (ENSPPRG00000006193) #26	MCOLN2 (ENSPPRG00000006914) #27	LPAR3 (ENSPPRG00000006969) #28	SSX2IP (ENSPPRG00000008492) #29	ENSPPRG00000008708	CTBS (ENSPPRG00000008795) #30	SPATA1 (ENSPPRG00000009258) #31	GNG5 (ENSPPRG00000009563) #32	RPF1 (ENSPPRG00000009777) #33	ENSPPRG00000009883 #34	ENSPPRG00000010218 #35	ENSPPRG00000010285	ENSPPRG00000010565 #36
Tiger	MODERN SPECIES	126	HS2ST1 (ENSPTIG00000010901)	SELENOF (ENSPTIG00000011115)	SH3GLB1 (ENSPTIG00000011684)	ENSPTIG00000012017	ENSPTIG00000012116	CLCA4 (ENSPTIG00000012168)	CLCA1 (ENSPTIG00000012542)	CLCA2 (ENSPTIG00000012779) #7	ODF2L (ENSPTIG00000013135) #8	COL24A1 (ENSPTIG00000013808) #11	ZNHIT6 (ENSPTIG00000014171) #13	CCN1 (ENSPTIG00000014498) #15	ENSPTIG00000010331 #16	DDAH1 (ENSPTIG00000014695) #18	BCL10 (ENSPTIG00000015138) #21	C1orf52 (ENSPTIG00000015690) #22	SYDE2 (ENSPTIG00000015910) #24	DNAI3 (ENSPTIG00000016214) #25	MCOLN3 (ENSPTIG00000016693) #26	MCOLN2 (ENSPTIG00000017601) #27	LPAR3 (ENSPTIG00000017836) #28	SSX2IP (ENSPTIG00000017936) #29	CTBS (ENSPTIG00000018263) #30	SPATA1 (ENSPTIG00000019012) #31	GNG5 (ENSPTIG00000019098) #32	RPF1 (ENSPTIG00000019164) #33	DNASE2B (ENSPTIG00000019401) #34	ENSPTIG00000019546 #35	SAMD13 (ENSPTIG00000019707) #36	ENSPTIG00000019784	PRKACB (ENSPTIG00000020230) #37
Cat	MODERN SPECIES	239	LMO4 (ENSFCAG00000044371)	HS2ST1 (ENSFCAG00000008006)	SELENOF (ENSFCAG00000005249)	SH3GLB1 (ENSFCAG00000028517)	ENSFCAG00000028907	ENSFCAG00000030426	CLCA4 (ENSFCAG00000018343)	CLCA1 (ENSFCAG00000031867)	CLCA2 (ENSFCAG00000008210) #7	ODF2L (ENSFCAG00000019281) #8	COL24A1 (ENSFCAG00000033986) #11	ZNHIT6 (ENSFCAG00000027469) #13	CCN1 (ENSFCAG00000031965) #15	DDAH1 (ENSFCAG00000029407) #18	BCL10 (ENSFCAG00000036364) #21	CC1H1orf52 (ENSFCAG00000035401) #22	SYDE2 (ENSFCAG00000027468) #24	DNAI3 (ENSFCAG00000011197) #25	MCOLN3 (ENSFCAG00000011196) #26	MCOLN2 (ENSFCAG00000011193) #27	LPAR3 (ENSFCAG00000008799) #28	SSX2IP (ENSFCAG00000023838) #29	CTBS (ENSFCAG00000046319) #30	SPATA1 (ENSFCAG00000022598) #31	GNG5 (ENSFCAG00000038836) #32	RPF1 (ENSFCAG00000025546) #33	DNASE2B (ENSFCAG00000008789) #34	UOX (ENSFCAG00000024210) #35	ENSFCAG00000050042	SAMD13 (ENSFCAG00000045569) #36	ENSFCAG00000049478
Caniformia	ANCESTRAL SPECIES	2	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Canidae	ANCESTRAL SPECIES	18	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00950000183199.a.b.p	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804.a	ENSGT00530000063936.b #36	ENSGT00940000163788
Canis_lupus	ANCESTRAL SPECIES	2	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00950000183199.a.b.p	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804.a	ENSGT00530000063936.b #36	ENSGT00940000163788
Dog	MODERN SPECIES	34	CLCA4 (ENSCAFG00845020831)	CLCA1 (ENSCAFG00845020906)	CLCA2 (ENSCAFG00845021008) #7	ODF2L (ENSCAFG00845021153) #8	ENSCAFG00845021655	ENSCAFG00845021690	COL24A1 (ENSCAFG00845022035) #11	ENSCAFG00845024397	ENSCAFG00845024424	ZNHIT6 (ENSCAFG00845024485) #13	CCN1 (ENSCAFG00845024708) #15	ENSCAFG00845024791 #16	ENSCAFG00845001033	DDAH1 (ENSCAFG00845001064) #18	BCL10 (ENSCAFG00845001105) #21	C6H1orf52 (ENSCAFG00845001130) #22	SYDE2 (ENSCAFG00845001161) #24	WDR63 (ENSCAFG00845001218) #25	MCOLN3 (ENSCAFG00845001310) #26	MCOLN2 (ENSCAFG00845001382) #27	LPAR3 (ENSCAFG00845001428) #28	ENSCAFG00845001445	SSX2IP (ENSCAFG00845001479) #29	ENSCAFG00845001531 #31	GNG5 (ENSCAFG00845001608) #30	RPF1 (ENSCAFG00845001641) #33	UOX (ENSCAFG00845001685) #35	DNASE2B (ENSCAFG00845001747) #34	ENSCAFG00845001765	ENSCAFG00845001788 #36	PRKACB (ENSCAFG00845001925) #37
Dingo	MODERN SPECIES	172	ENSCAFG00020013754	SH3GLB1 (ENSCAFG00020013756)	ENSCAFG00020013760	CLCA4 (ENSCAFG00020013813)	CLCA1 (ENSCAFG00020013898)	CLCA2 (ENSCAFG00020013957) #7	ODF2L (ENSCAFG00020013982) #8	ENSCAFG00020014075	ENSCAFG00020014085	ENSCAFG00020014087 #11	ZNHIT6 (ENSCAFG00020014100) #13	CCN1 (ENSCAFG00020014107) #15	ENSCAFG00020014109 #16	DDAH1 (ENSCAFG00020014115) #18	BCL10 (ENSCAFG00020014121) #21	C1orf52 (ENSCAFG00020014126) #22	SYDE2 (ENSCAFG00020014128) #24	DNAI3 (ENSCAFG00020014165) #25	MCOLN3 (ENSCAFG00020014182) #26	MCOLN2 (ENSCAFG00020014195) #27	LPAR3 (ENSCAFG00020014218) #28	ENSCAFG00020014228	SSX2IP (ENSCAFG00020014235) #29	CTBS (ENSCAFG00020014264) #30	SPATA1 (ENSCAFG00020014283) #31	GNG5 (ENSCAFG00020014293) #32	ENSCAFG00020014296 #33	DNASE2B (ENSCAFG00020014302) #34	ENSCAFG00020014308 #35	ENSCAFG00020014317	SAMD13 (ENSCAFG00020014319) #36
Red fox	MODERN SPECIES	50	SELENOF (ENSVVUG00000030159)	SH3GLB1 (ENSVVUG00000030155)	ENSVVUG00000030152	CLCA4 (ENSVVUG00000030149)	CLCA1 (ENSVVUG00000030143)	CLCA2 (ENSVVUG00000030122) #7	ODF2L (ENSVVUG00000030120) #8	ENSVVUG00000030118	ENSVVUG00000030110	ENSVVUG00000030103 #11	ZNHIT6 (ENSVVUG00000030102) #13	CYR61 (ENSVVUG00000030100) #15	ENSVVUG00000030098 #16	DDAH1 (ENSVVUG00000030097) #18	BCL10 (ENSVVUG00000030096) #21	C1orf52 (ENSVVUG00000030094) #22	SYDE2 (ENSVVUG00000030093) #24	WDR63 (ENSVVUG00000030090) #25	MCOLN3 (ENSVVUG00000030089) #26	MCOLN2 (ENSVVUG00000030088) #27	LPAR3 (ENSVVUG00000030085) #28	SSX2IP (ENSVVUG00000030083) #29	CTBS (ENSVVUG00000030082) #30	SPATA1 (ENSVVUG00000030078) #31	ENSVVUG00000030076 #33	DNASE2B (ENSVVUG00000030073) #34	ENSVVUG00000030072 #35	ENSVVUG00000030071	SAMD13 (ENSVVUG00000030070) #36	ENSVVUG00000030069	PRKACB (ENSVVUG00000030067) #37
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00390000009268.y.a	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00530000063936.b #36	ENSGT00940000163788
Ursidae	ANCESTRAL SPECIES	32	ENSGT00390000009268.y.a	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b.i #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.d ##32
Ursus	ANCESTRAL SPECIES	139	ENSGT00940000157730	ENSGT00390000009268.y.a	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b.i #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.d ##32
American black bear	MODERN SPECIES	1481														DDAH1 (ENSUAMG00000019285) #18	BCL10 (ENSUAMG00000019286) #21	C1orf52 (ENSUAMG00000019287) #22	SYDE2 (ENSUAMG00000019288) #24
Polar bear	MODERN SPECIES	170	LMO4 (ENSUMAG00000001651)	ENSUMAG00000001654	HS2ST1 (ENSUMAG00000001671)	SELENOF (ENSUMAG00000001679)	SH3GLB1 (ENSUMAG00000001715)	ENSUMAG00000001751	CLCA4 (ENSUMAG00000001934)	CLCA1 (ENSUMAG00000002319)	CLCA2 (ENSUMAG00000002415) #7	ODF2L (ENSUMAG00000002451) #8	ENSUMAG00000002474 #11	ZNHIT6 (ENSUMAG00000002478) #13	CCN1 (ENSUMAG00000002488) #15	DDAH1 (ENSUMAG00000002499) #18	BCL10 (ENSUMAG00000002502) #21	C1orf52 (ENSUMAG00000002504) #22	SYDE2 (ENSUMAG00000002509) #24	DNAI3 (ENSUMAG00000002541) #25	MCOLN3 (ENSUMAG00000002560) #26	MCOLN2 (ENSUMAG00000002572) #27	LPAR3 (ENSUMAG00000002579) #28	SSX2IP (ENSUMAG00000002601) #29	CTBS (ENSUMAG00000002608) #30	SPATA1 (ENSUMAG00000002623) #31	ENSUMAG00000002631 ##32	RPF1 (ENSUMAG00000002636) #33	DNASE2B (ENSUMAG00000002646) #34	ENSUMAG00000002660 #35	SAMD13 (ENSUMAG00000002672) #36	ENSUMAG00000002678	ENSUMAG00000002683
Giant Panda	MODERN SPECIES	11	ENSAMEG00000020192	HS2ST1 (ENSAMEG00000016204)	SELENOF (ENSAMEG00000027639)	SH3GLB1 (ENSAMEG00000016222)	ENSAMEG00000015592	CLCA4 (ENSAMEG00000017158)	CLCA1 (ENSAMEG00000017170)	CLCA2 (ENSAMEG00000017197) #7	ODF2L (ENSAMEG00000017198) #8	COL24A1 (ENSAMEG00000017218) #11	ZNHIT6 (ENSAMEG00000017224) #13	CCN1 (ENSAMEG00000017235) #15	ENSAMEG00000023476 #16	DDAH1 (ENSAMEG00000017246) #18	BCL10 (ENSAMEG00000026623) #21	C1orf52 (ENSAMEG00000023530) #22	SYDE2 (ENSAMEG00000017261) #24	DNAI3 (ENSAMEG00000017265) #25	MCOLN3 (ENSAMEG00000017280) #26	MCOLN2 (ENSAMEG00000017295) #27	SSX2IP (ENSAMEG00000006467) #29	CTBS (ENSAMEG00000000372) #30	SPATA1 (ENSAMEG00000000388) #31	ENSAMEG00000029878 #32	RPF1 (ENSAMEG00000008531) #33	DNASE2B (ENSAMEG00000013581) #34	ENSAMEG00000013543 #35	ENSAMEG00000031257	SAMD13 (ENSAMEG00000026469) #36	PRKACB (ENSAMEG00000013506) #37	TTLL7 (ENSAMEG00000014783)
Mustelinae	ANCESTRAL SPECIES	60	ENSGT00390000009268.y.a	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00960000186747 #16	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.c.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b #36
Ferret	MODERN SPECIES	197	GTF2B (ENSMPUG00000004799)	PKN2 (ENSMPUG00000004804)	ENSMPUG00000004816	LMO4 (ENSMPUG00000004821)	HS2ST1 (ENSMPUG00000004829)	SH3GLB1 (ENSMPUG00000004832)	ENSMPUG00000004938	CLCA4 (ENSMPUG00000005112)	CLCA1 (ENSMPUG00000005181)	ODF2L (ENSMPUG00000005220) #8	COL24A1 (ENSMPUG00000005229) #11	ZNHIT6 (ENSMPUG00000005352) #13	CCN1 (ENSMPUG00000005430) #15	DDAH1 (ENSMPUG00000005441) #18	BCL10 (ENSMPUG00000005447) #21	ENSMPUG00000005524 #22	SYDE2 (ENSMPUG00000005531) #24	DNAI3 (ENSMPUG00000005544) #25	MCOLN3 (ENSMPUG00000005571) #26	LPAR3 (ENSMPUG00000005683) #28	SSX2IP (ENSMPUG00000005687) #29	CTBS (ENSMPUG00000005696) #30	SPATA1 (ENSMPUG00000005701) #31	ENSMPUG00000005730 #32	ENSMPUG00000005736 #33	DNASE2B (ENSMPUG00000005741) #34	ENSMPUG00000005748 #35	ENSMPUG00000005757	SAMD13 (ENSMPUG00000005761) #36	PRKACB (ENSMPUG00000005765) #37	TTLL7 (ENSMPUG00000005774)
American mink	MODERN SPECIES	141	ENSNVIG00000010303	HS2ST (ENSNVIG00000010265)	SELENOF (ENSNVIG00000010248)	SH3GLB1 (ENSNVIG00000010176)	ENSNVIG00000010085	CLCA4 (ENSNVIG00000010023)	CLCA1 (ENSNVIG00000009950)	CLCA2 (ENSNVIG00000009915) #7	ODF2L (ENSNVIG00000009848) #8	COL24A1 (ENSNVIG00000009756) #11	ZNHIT6 (ENSNVIG00000009678) #13	CCN1 (ENSNVIG00000009667) #15	ENSNVIG00000009665 #16	DDAH1 (ENSNVIG00000009631) #18	BCL10 (ENSNVIG00000009612) #21	C1orf52 (ENSNVIG00000009606) #22	SYDE2 (ENSNVIG00000009581) #24	DNAI3 (ENSNVIG00000009565) #25	MCOLN3 (ENSNVIG00000009481) #26	MCOLN2 (ENSNVIG00000009411) #27	LPAR3 (ENSNVIG00000009396) #28	SSX2IP (ENSNVIG00000009366) #29	CTBS (ENSNVIG00000009351) #30	SPATA1 (ENSNVIG00000009323) #31	ENSNVIG00000009308 #32	RPF1 (ENSNVIG00000009290) #33	DNASE2B (ENSNVIG00000009276) #34	ENSNVIG00000009249 #35	ENSNVIG00000009242	ENSNVIG00000009235	SAMD13 (ENSNVIG00000009219) #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000017398 #22
Hedgehog	DUPLICATION
Hedgehog	MODERN SPECIES	9072																ENSEEUG00000003599 #22
Hedgehog	MODERN SPECIES	10725																ENSEEUG00000013639 #22
Common shrew	MODERN SPECIES	4242																ENSSARG00000000256 #22
Atlantogenata	ANCESTRAL SPECIES	11	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36	ENSGT00940000163788	ENSGT00940000161169 #37
Xenarthra	ANCESTRAL SPECIES	194		ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25
Armadillo	MODERN SPECIES	4216	LMO4 (ENSDNOG00000047628)	HS2ST1 (ENSDNOG00000049698)	SELENOF (ENSDNOG00000004701)	SH3GLB1 (ENSDNOG00000039119)	ENSDNOG00000040224	CLCA4 (ENSDNOG00000001159)	CLCA1 (ENSDNOG00000001155)	CLCA2 (ENSDNOG00000001152) #7	ODF2L (ENSDNOG00000010680) #8	ENSDNOG00000044659	COL24A1 (ENSDNOG00000016150) #11	ZNHIT6 (ENSDNOG00000044251) #13	CCN1 (ENSDNOG00000002945) #15	DDAH1 (ENSDNOG00000035701) #18	ENSDNOG00000010048 #21	C1orf52 (ENSDNOG00000031696) #22	SYDE2 (ENSDNOG00000017951) #24	DNAI3 (ENSDNOG00000017947) #25
Sloth	MODERN SPECIES	4867															BCL10 (ENSCHOG00000012878) #21	C1orf52 (ENSCHOG00000012863) #22
Afrotheria	ANCESTRAL SPECIES	21	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00940000161169 #37	ENSGT00940000159078
Afrotheria_a	ANCESTRAL SPECIES	20	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000160416	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00940000161169 #37	ENSGT00940000159078
Elephant	MODERN SPECIES	145	GTF2B (ENSLAFG00000006102)	PKN2 (ENSLAFG00000010893)	LMO4 (ENSLAFG00000017723)	HS2ST1 (ENSLAFG00000011894)	SH3GLB1 (ENSLAFG00000017719)	ENSLAFG00000007726	CLCA4 (ENSLAFG00000014375)	CLCA1 (ENSLAFG00000006917)	CLCA2 (ENSLAFG00000006916) #7	ODF2L (ENSLAFG00000010775) #8	ENSLAFG00000012889 #11	ZNHIT6 (ENSLAFG00000032483) #13	CCN1 (ENSLAFG00000022979) #15	DDAH1 (ENSLAFG00000010363) #18	BCL10 (ENSLAFG00000003648) #21	C1orf52 (ENSLAFG00000007499) #22	SYDE2 (ENSLAFG00000016031) #24	DNAI3 (ENSLAFG00000016022) #25	MCOLN3 (ENSLAFG00000016018) #26	MCOLN2 (ENSLAFG00000029928) #27	LPAR3 (ENSLAFG00000010892) #28	SSX2IP (ENSLAFG00000013496) #29	CTBS (ENSLAFG00000011739) #30	SPATA1 (ENSLAFG00000013256) #31	ENSLAFG00000007034 #32	RPF1 (ENSLAFG00000007031) #33	DNASE2B (ENSLAFG00000031438) #34	ENSLAFG00000026431 #35	ENSLAFG00000031962	PRKACB (ENSLAFG00000006544) #37	TTLL7 (ENSLAFG00000022500)
Hyrax	MODERN SPECIES	10712																C1orf52 (ENSPCAG00000006794) #22
Tenrec	MODERN SPECIES	15061																C1orf52 (ENSETEG00000005648) #22
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000154682.C.p	ENSGT00940000154682.C.o	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36
Opossum	MODERN SPECIES	1	ENSMODG00000008041	SH3GLB1 (ENSMODG00000008125)	ENSMODG00000008134	HS2ST1 (ENSMODG00000008154)	LMO4 (ENSMODG00000008163)	ENSMODG00000048769	ENSMODG00000007456	CLCA2 (ENSMODG00000000026) #7	ENSMODG00000000056 #8	ENSMODG00000000076	ENSMODG00000048730 #11	ENSMODG00000025703 #13	CCN1 (ENSMODG00000000285) #15	DDAH1 (ENSMODG00000000292) #18	BCL10 (ENSMODG00000037224) #21	C1orf52 (ENSMODG00000000302) #22	SYDE2 (ENSMODG00000000311) #24	DNAI3 (ENSMODG00000000354) #25	MCOLN3 (ENSMODG00000000378) #26	MCOLN2 (ENSMODG00000000390) #27	LPAR3 (ENSMODG00000000401) #28	SSX2IP (ENSMODG00000000409) #29	CTBS (ENSMODG00000000421) #30	SPATA1 (ENSMODG00000041648) #31	ENSMODG00000048242 #32	RPF1 (ENSMODG00000000452) #33	DNASE2B (ENSMODG00000000513) #34	ENSMODG00000000498 #35	ENSMODG00000048125	PRKACB (ENSMODG00000000539) #37	TTLL7 (ENSMODG00000000596)
Marsupialia_b	ANCESTRAL SPECIES	6	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000154682.C.p	ENSGT00940000154682.C.o	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36
Tasmanian devil	MODERN SPECIES	3	GTF2B (ENSSHAG00000005314)	PKN2 (ENSSHAG00000006110)	LMO4 (ENSSHAG00000026182)	HS2ST1 (ENSSHAG00000004758)	SELENOF (ENSSHAG00000026888)	SH3GLB1 (ENSSHAG00000024847)	ENSSHAG00000030068	ENSSHAG00000006437	CLCA2 (ENSSHAG00000007009) #7	ODF2L (ENSSHAG00000008055) #8	ENSSHAG00000010203	ENSSHAG00000012272 #13	CCN1 (ENSSHAG00000012809) #15	DDAH1 (ENSSHAG00000031838) #18	BCL10 (ENSSHAG00000024145) #21	ENSSHAG00000028512 #22	SYDE2 (ENSSHAG00000014946) #24	DNAI3 (ENSSHAG00000015341) #25	MCOLN3 (ENSSHAG00000015722) #26	MCOLN2 (ENSSHAG00000015932) #27	LPAR3 (ENSSHAG00000016258) #28	SSX2IP (ENSSHAG00000017020) #29	ENSSHAG00000017130	CTBS (ENSSHAG00000017432) #30	SPATA1 (ENSSHAG00000017459) #31	ENSSHAG00000024357 #32	RPF1 (ENSSHAG00000017559) #33	ENSSHAG00000017746 #35	DNASE2B (ENSSHAG00000017718) #34	ENSSHAG00000025421	SAMD13 (ENSSHAG00000023065) #36
Diprotodontia	ANCESTRAL SPECIES	7	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000154682.C.p	ENSGT00940000154682.C.o	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36	ENSGT00940000161169 #37
Diprotodontia_a	ANCESTRAL SPECIES	3	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000157555	ENSGT00940000154682.C.p	ENSGT00940000154682.C.o.a	ENSGT00940000154682.C.o.b	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000162448 #11	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b.a #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36	ENSGT00940000161169 #37
Common wonbat	MODERN SPECIES	1039							ENSVURG00010009706	CLCA2 (ENSVURG00010009708) #7	ODF2L (ENSVURG00010009736) #8	ENSVURG00010009753 #11	ENSVURG00010009770 #11	ENSVURG00010009785 #13	CCN1 (ENSVURG00010009801) #15	DDAH1 (ENSVURG00010009811) #18	ENSVURG00010009831 #21	C1orf52 (ENSVURG00010009839) #22	SYDE2 (ENSVURG00010009847) #24	ENSVURG00010009867	DNAI3 (ENSVURG00010009880) #25	MCOLN3 (ENSVURG00010009987) #26	MCOLN2 (ENSVURG00010009998) #27	LPAR3 (ENSVURG00010010046) #28	SSX2IP (ENSVURG00010010062) #29	CTBS (ENSVURG00010010118) #30	SPATA1 (ENSVURG00010010137) #31	ENSVURG00010010149 #32	RPF1 (ENSVURG00010010163) #33	ENSVURG00010010200 #35	DNASE2B (ENSVURG00010010227) #34	PRKACB (ENSVURG00010010251) #37	TTLL7 (ENSVURG00010010284)
koala	MODERN SPECIES	32	ENSPCIG00000014503	ENSPCIG00000014505	ENSPCIG00000016355	ENSPCIG00000036253	ENSPCIG00000007904	ENSPCIG00000036261	ENSPCIG00000010259	ENSPCIG00000035533	CLCA2 (ENSPCIG00000014520) #7	ENSPCIG00000014539 #8	ENSPCIG00000006638 #11	ENSPCIG00000006645 #13	CCN1 (ENSPCIG00000006652) #15	DDAH1 (ENSPCIG00000006654) #18	BCL10 (ENSPCIG00000006659) #21	C1orf52 (ENSPCIG00000006660) #22	SYDE2 (ENSPCIG00000006661) #24	DNAI3 (ENSPCIG00000006664) #25	MCOLN3 (ENSPCIG00000002891) #26	MCOLN2 (ENSPCIG00000006673) #27	LPAR3 (ENSPCIG00000006675) #28	SSX2IP (ENSPCIG00000006678) #29	CTBS (ENSPCIG00000006682) #30	SPATA1 (ENSPCIG00000006684) #31	ENSPCIG00000006687 #32	RPF1 (ENSPCIG00000006692) #33	DNASE2B (ENSPCIG00000006696) #34	ENSPCIG00000033404	ENSPCIG00000006699 #35	SAMD13 (ENSPCIG00000032677) #36	PRKACB (ENSPCIG00000013356) #37
Sauria	ANCESTRAL SPECIES	7	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36
Archelosauria	ANCESTRAL SPECIES	9	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Cryptodira	ANCESTRAL SPECIES	8	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000154284.b	ENSGT00940000161655	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00940000153229.B.e #35	ENSGT00390000002634.b #34	ENSGT00940000153229.B.f #35
Testudinoidea	ANCESTRAL SPECIES	5	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000155667	ENSGT00940000154682.C.k.b	ENSGT00940000161548 #7	ENSGT00530000063497.b.b #8	ENSGT00940000162448 #11	ENSGT00530000063497.b.a #8	ENSGT00940000163583	ENSGT00390000017201.j #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00940000153229.B.e #35	ENSGT00390000002634.b #34	ENSGT01030000235381.b
Emydidae	ANCESTRAL SPECIES	22							ENSGT00940000163111.a.b.a.e	ENSGT00530000063936.a ##36	ENSGT00940000154382.a.a	ENSGT00530000063497.b.b #8	ENSGT00940000163583	ENSGT00390000017201.j #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00940000153229.B.e #35	ENSGT00390000002634.b #34	ENSGT01030000235381.b
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	97	ENSTMTG00000008927	ENSTMTG00000008943	ENSTMTG00000008979	ENSTMTG00000008988	ENSTMTG00000009007	ENSTMTG00000009014	ENSTMTG00000009182	ENSTMTG00000011441 #7	ENSTMTG00000011499 #8	ENSTMTG00000011557 #11	ENSTMTG00000011573	ENSTMTG00000011591 #13	ENSTMTG00000011673 #15	ENSTMTG00000011678 #18	ENSTMTG00000011688	ENSTMTG00000011694 #22	ENSTMTG00000011702 #24	ENSTMTG00000011718 #25	ENSTMTG00000011742 #26	ENSTMTG00000011777 #27	ENSTMTG00000011803 #28	ENSTMTG00000011816 #29	ENSTMTG00000011870	ENSTMTG00000011969	ENSTMTG00000012158 #30	ENSTMTG00000012168 #31	ENSTMTG00000012197 #32	ENSTMTG00000012211 #33	ENSTMTG00000012240 #34	ENSTMTG00000012268	ENSTMTG00000012281
Three-toed box turtle	MODERN SPECIES	98	ENSTMTG00000005714	ENSTMTG00000005736	ENSTMTG00000005754	ENSTMTG00000005801	ENSTMTG00000005822	ENSTMTG00000005884	ENSTMTG00000005898	ENSTMTG00000006115	ENSTMTG00000008084 #7	ENSTMTG00000008164 #8	ENSTMTG00000008191	ENSTMTG00000008198 #13	ENSTMTG00000008228 #15	ENSTMTG00000008240 #18	ENSTMTG00000008249	ENSTMTG00000008260 #22	ENSTMTG00000008273 #24	ENSTMTG00000008283 #25	ENSTMTG00000008305 #26	ENSTMTG00000008334 #27	ENSTMTG00000008382	ENSTMTG00000008389 #28	ENSTMTG00000008410 #29	ENSTMTG00000008502	ENSTMTG00000008997	ENSTMTG00000009154 #30	ENSTMTG00000009164 #31	ENSTMTG00000009188 #32	ENSTMTG00000009199 #33	ENSTMTG00000009218 #34	ENSTMTG00000009229
painted turtle	MODERN SPECIES	17	ENSCPBG00000001200	ENSCPBG00000001197	LEPR (ENSCPBG00000001180)	LEPROT (ENSCPBG00000001162)	DNAJC6 (ENSCPBG00000001130)	ENSCPBG00000001084	JAK1 (ENSCPBG00000001053)	RAVER2 (ENSCPBG00000001015)	CACHD1 (ENSCPBG00000000916)	UBE2U (ENSCPBG00000000879)	ROR1 (ENSCPBG00000000862)	TTLL7 (ENSCPBG00000000823)	CCN1 (ENSCPBG00000000725) #15	DDAH1 (ENSCPBG00000000692) #18	ENSCPBG00000000682	C1orf52 (ENSCPBG00000000673) #22	SYDE2 (ENSCPBG00000000651) #24	DNAI3 (ENSCPBG00000000595) #25	MCOLN3 (ENSCPBG00000000550) #26	MCOLN2 (ENSCPBG00000000312) #27	LPAR3 (ENSCPBG00000000291) #28	SSX2IP (ENSCPBG00000000257) #29	ENSCPBG00000025916	ENSCPBG00000025915	CTBS (ENSCPBG00000025914) #30	SPATA1 (ENSCPBG00000025913) #31	ENSCPBG00000025912 #32	RPF1 (ENSCPBG00000025911) #33	ENSCPBG00000025910 #35	DNASE2B (ENSCPBG00000025908) #34	ENSCPBG00000025907 #35
Testudinidae	ANCESTRAL SPECIES	41	ENSGT01030000234559.a.a.b.a	ENSGT00940000166147	ENSGT00390000009916	ENSGT00940000154912	ENSGT00940000160578	ENSGT00980000199422	ENSGT00940000159684.jb	ENSGT00390000004692.d.a.k	ENSGT00940000163111.a.b.a.e.a	ENSGT00530000063936.a ##36	ENSGT00940000154382.a.a	ENSGT00390000017201.j #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00940000153229.B.e #35	ENSGT00390000002634.b #34	ENSGT01030000235381.b
Abingdon island giant tortoise	MODERN SPECIES	2065														DDAH1 (ENSCABG00000000262) #18	ENSCABG00000000289	C1orf52 (ENSCABG00000000299) #22	SYDE2 (ENSCABG00000000305) #24	DNAI3 (ENSCABG00000000313) #25	MCOLN3 (ENSCABG00000000330) #26	MCOLN2 (ENSCABG00000000407) #27	LPAR3 (ENSCABG00000000444) #28	SSX2IP (ENSCABG00000000451) #29	ENSCABG00000000480	ENSCABG00000000569	CTBS (ENSCABG00000000594) #30	SPATA1 (ENSCABG00000000602) #31	ENSCABG00000000627 #32	RPF1 (ENSCABG00000000632) #33	ENSCABG00000000646 #35	DNASE2B (ENSCABG00000000718) #34	ENSCABG00000000722
Goode s thornscrub tortoise	MODERN SPECIES	22	LMO4 (ENSGEVG00005006075)	HS2ST1 (ENSGEVG00005006085)	ENSGEVG00005006103	ENSGEVG00005006119	SH3GLB1 (ENSGEVG00005006135)	ENSGEVG00005006157	ENSGEVG00005006251	ENSGEVG00005006344	CLCA2 (ENSGEVG00005006894) #7	ODF2L (ENSGEVG00005008710) #8	ENSGEVG00005008763	ZNHIT6 (ENSGEVG00005008780) #13	CCN1 (ENSGEVG00005008830) #15	DDAH1 (ENSGEVG00005008857) #18	ENSGEVG00005008877	C1orf52 (ENSGEVG00005008893) #22	SYDE2 (ENSGEVG00005008926) #24	DNAI3 (ENSGEVG00005009007) #25	MCOLN3 (ENSGEVG00005009204) #26	MCOLN2 (ENSGEVG00005009299) #27	LPAR3 (ENSGEVG00005009383) #28	SSX2IP (ENSGEVG00005009418) #29	ENSGEVG00005009529	ENSGEVG00005010203	CTBS (ENSGEVG00005010771) #30	SPATA1 (ENSGEVG00005010819) #31	ENSGEVG00005010887 #32	RPF1 (ENSGEVG00005010919) #33	ENSGEVG00005010973 #35	DNASE2B (ENSGEVG00005011013) #34	ENSGEVG00005011038
Chinese turtle	MODERN SPECIES	867			LMO4 (ENSPSIG00000015708)	ENSPSIG00000001800	HS2ST1 (ENSPSIG00000015802)	ENSPSIG00000006665	ENSPSIG00000006673	SH3GLB1 (ENSPSIG00000006840)	CLCA1 (ENSPSIG00000007038)	ODF2L (ENSPSIG00000011027) #8	ENSPSIG00000012330	ZNHIT6 (ENSPSIG00000013856) #13	CCN1 (ENSPSIG00000014026) #15	DDAH1 (ENSPSIG00000014329) #18	ENSPSIG00000014531	C1orf52 (ENSPSIG00000014776) #22	SYDE2 (ENSPSIG00000014791) #24	DNAI3 (ENSPSIG00000014927) #25	MCOLN3 (ENSPSIG00000015503) #26	MCOLN2 (ENSPSIG00000015749) #27	LPAR3 (ENSPSIG00000016421) #28	SSX2IP (ENSPSIG00000016706) #29	ENSPSIG00000017070	ENSPSIG00000017211	CTBS (ENSPSIG00000017282) #30	SPATA1 (ENSPSIG00000017323) #31	RPF1 (ENSPSIG00000017437) #33	ENSPSIG00000017540 #35	DNASE2B (ENSPSIG00000006801) #34	ENSPSIG00000006858 #35	SAMD13 (ENSPSIG00000006863) #36
Archosauria	ANCESTRAL SPECIES	11	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Aves	ANCESTRAL SPECIES	7	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Neognathae	ANCESTRAL SPECIES	8	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Galloanserae	ANCESTRAL SPECIES	8	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Anatidae	ANCESTRAL SPECIES	5	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.b	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Pink-footed goose	MODERN SPECIES	1	GTF2B (ENSABRG00000019503)	PKN2 (ENSABRG00000019497)	LMO4 (ENSABRG00000019475)	HS2ST1 (ENSABRG00000019463)	ENSABRG00000019458	SH3GLB1 (ENSABRG00000019451)	CLCA1 (ENSABRG00000018789)	CLCA2 (ENSABRG00000018718) #7	ODF2L (ENSABRG00000018706) #8	ENSABRG00000018651	ENSABRG00000018648	ZNHIT6 (ENSABRG00000018645) #13	CCN1 (ENSABRG00000018644) #15	DDAH1 (ENSABRG00000018643) #18	ENSABRG00000018642	C1orf52 (ENSABRG00000018640) #22	SYDE2 (ENSABRG00000018635) #24	DNAI3 (ENSABRG00000018607) #25	MCOLN3 (ENSABRG00000018595) #26	MCOLN2 (ENSABRG00000018585) #27	LPAR3 (ENSABRG00000018582) #28	SSX2IP (ENSABRG00000018577) #29	ENSABRG00000018543	ENSABRG00000018506	CTBS (ENSABRG00000018498) #30	ENSABRG00000018495 #31	ENSABRG00000018492 #32	RPF1 (ENSABRG00000018488) #33	DNASE2B (ENSABRG00000018484) #34	ENSABRG00000018473 #35	SAMD13 (ENSABRG00000018468) #36
Duck	MODERN SPECIES	26	PKN2 (ENSAPLG00000014769)	LMO4 (ENSAPLG00000030327)	ENSAPLG00000017611	HS2ST1 (ENSAPLG00000014649)	ENSAPLG00000024886	SH3GLB1 (ENSAPLG00000014317)	ENSAPLG00000021297	ENSAPLG00000004603 #7	ODF2L (ENSAPLG00000004590) #8	ENSAPLG00000031231	ENSAPLG00000022674	ZNHIT6 (ENSAPLG00000003644) #13	CCN1 (ENSAPLG00000003558) #15	DDAH1 (ENSAPLG00000017443) #18	ENSAPLG00000003517	C1orf52 (ENSAPLG00000029539) #22	SYDE2 (ENSAPLG00000003510) #24	DNAI3 (ENSAPLG00000003460) #25	MCOLN3 (ENSAPLG00000003304) #26	MCOLN2 (ENSAPLG00000003123) #27	LPAR3 (ENSAPLG00000003113) #28	SSX2IP (ENSAPLG00000002969) #29	ENSAPLG00000016418	ENSAPLG00000021250	CTBS (ENSAPLG00000016415) #30	SPATA1 (ENSAPLG00000016401) #31	ENSAPLG00000000630 #32	RPF1 (ENSAPLG00000016382) #33	ENSAPLG00000016344 #35	DNASE2B (ENSAPLG00000026479) #34	SAMD13 (ENSAPLG00000016342) #36
Phasianidae	ANCESTRAL SPECIES	7	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Phasianidae_b	ANCESTRAL SPECIES	7	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT00940000165410	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35
Chicken	MODERN SPECIES	37	LRRC8B (ENSGALG00010022731)	KYAT3 (ENSGALG00010022877)	GTF2B (ENSGALG00010022930)	PKN2 (ENSGALG00010022983)	LMO4 (ENSGALG00010023007)	HS2ST1 (ENSGALG00010023030)	SELENOF (ENSGALG00010023059)	SH3GLB1 (ENSGALG00010023087)	CLCA2 (ENSGALG00010023101) #7	ODF2L (ENSGALG00010023161) #8	ENSGALG00010023195	ZNHIT6 (ENSGALG00010023210) #13	CYR61 (ENSGALG00010020677) #15	DDAH1 (ENSGALG00010024494) #18	BCL10 (ENSGALG00010020681)	C1orf52 (ENSGALG00010020686) #22	SYDE2 (ENSGALG00010020753) #24	DNAI3 (ENSGALG00010020758) #25	MCOLN3 (ENSGALG00010020776) #26	MCOLN2 (ENSGALG00010020811) #27	LPAR3 (ENSGALG00010020840) #28	SSX2IP (ENSGALG00010021533) #29	VTG2 (ENSGALG00010020856)	ENSGALG00010020884	VTG3 (ENSGALG00010020897)	CTBS (ENSGALG00010020946) #30	GNG5 (ENSGALG00010020952) #32	RPF1 (ENSGALG00010020957) #33	ENSGALG00010020715 #35	DNASE2B (ENSGALG00010024505) #34	THAP10 (ENSGALG00010020742) #36
Turkey	MODERN SPECIES	1	LRRC8B (ENSMGAG00000008513)	KYAT3 (ENSMGAG00000008515)	GTF2B (ENSMGAG00000008534)	PKN2 (ENSMGAG00000008542)	HS2ST1 (ENSMGAG00000008617)	SELENOF (ENSMGAG00000008630)	SH3GLB1 (ENSMGAG00000008633)	CLCA1 (ENSMGAG00000008656)	CLCA2 (ENSMGAG00000017045) #7	ODF2L (ENSMGAG00000008713) #8	ENSMGAG00000018110	ZNHIT6 (ENSMGAG00000008891) #13	CCN1 (ENSMGAG00000008895) #15	DDAH1 (ENSMGAG00000008919) #18	ENSMGAG00000008930	C1orf52 (ENSMGAG00000019997) #22	SYDE2 (ENSMGAG00000008940) #24	DNAI3 (ENSMGAG00000008955) #25	MCOLN3 (ENSMGAG00000008983) #26	MCOLN2 (ENSMGAG00000009009) #27	LPAR3 (ENSMGAG00000009028) #28	SSX2IP (ENSMGAG00000009038) #29	ENSMGAG00000009088	ENSMGAG00000019075	CTBS (ENSMGAG00000009191) #30	ENSMGAG00000009196 #31	ENSMGAG00000022687	RPF1 (ENSMGAG00000009207) #33	ENSMGAG00000009240 #35	DNASE2B (ENSMGAG00000009219) #34	ENSMGAG00000020035
Japanese quail	MODERN SPECIES	26	GTF2B (ENSCJPG00005008246)	PKN2 (ENSCJPG00005008247)	LMO4 (ENSCJPG00005008250)	HS2ST1 (ENSCJPG00005008267)	ENSCJPG00005008274	SH3GLB1 (ENSCJPG00005008275)	CLCA1 (ENSCJPG00005008279)	CLCA2 (ENSCJPG00005008282) #7	ODF2L (ENSCJPG00005008286) #8	ENSCJPG00005008293	ENSCJPG00005008294	ZNHIT6 (ENSCJPG00005008295) #13	CCN1 (ENSCJPG00005008310) #15	DDAH1 (ENSCJPG00005008314) #18	ENSCJPG00005008315	C1orf52 (ENSCJPG00005008317) #22	SYDE2 (ENSCJPG00005008320) #24	DNAI3 (ENSCJPG00005008321) #25	MCOLN3 (ENSCJPG00005008324) #26	MCOLN2 (ENSCJPG00005008325) #27	LPAR3 (ENSCJPG00005008331) #28	SSX2IP (ENSCJPG00005008332) #29	ENSCJPG00005008333	ENSCJPG00005008334	CTBS (ENSCJPG00005008336) #30	SPATA1 (ENSCJPG00005008337) #31	ENSCJPG00005008338 #32	RPF1 (ENSCJPG00005008339) #33	ENSCJPG00005008342 #35	DNASE2B (ENSCJPG00005008343) #34	ENSCJPG00005008346
Neognathae_b	ANCESTRAL SPECIES	10	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.b	ENSGT00940000161655	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Passeriformes	ANCESTRAL SPECIES	8	ENSGT00940000160703	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.b	ENSGT00940000161655	ENSGT00940000155667	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Great tit	MODERN SPECIES	28	LRRC8C (ENSPMJG00000019409)	LRRC8B (ENSPMJG00000019410)	KYAT3 (ENSPMJG00000019411)	GTF2B (ENSPMJG00000019412)	PKN2 (ENSPMJG00000019413)	LMO4 (ENSPMJG00000019420)	HS2ST1 (ENSPMJG00000019423)	ENSPMJG00000019424	SH3GLB1 (ENSPMJG00000019425)	ODF2L (ENSPMJG00000019426) #8	ENSPMJG00000019427	ZNHIT6 (ENSPMJG00000019428) #13	CCN1 (ENSPMJG00000019429) #15	DDAH1 (ENSPMJG00000019431) #18	ENSPMJG00000019432	C1orf52 (ENSPMJG00000019433) #22	SYDE2 (ENSPMJG00000019434) #24	DNAI3 (ENSPMJG00000019435) #25	MCOLN3 (ENSPMJG00000019436) #26	MCOLN2 (ENSPMJG00000019437) #27	LPAR3 (ENSPMJG00000019438) #28	SSX2IP (ENSPMJG00000019440) #29	ENSPMJG00000019441	ENSPMJG00000019442	CTBS (ENSPMJG00000019443) #30	ENSPMJG00000019445 #32	RPF1 (ENSPMJG00000019446) #33	DNASE2B (ENSPMJG00000019447) #34	ENSPMJG00000019448 #35	SAMD13 (ENSPMJG00000019449) #36	ENSPMJG00000019450
Passeriformes_d	ANCESTRAL SPECIES	9	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000155667	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Flycatcher	MODERN SPECIES	27	LRRC8C (ENSFALG00000028640)	LRRC8B (ENSFALG00000001662)	KYAT3 (ENSFALG00000001642)	GTF2B (ENSFALG00000001636)	PKN2 (ENSFALG00000001631)	LMO4 (ENSFALG00000006303)	HS2ST1 (ENSFALG00000029094)	ENSFALG00000027798	SH3GLB1 (ENSFALG00000006285)	ODF2L (ENSFALG00000006278) #8	ENSFALG00000006249	ZNHIT6 (ENSFALG00000006230) #13	CCN1 (ENSFALG00000006221) #15	DDAH1 (ENSFALG00000006215) #18	ENSFALG00000006213	C1orf52 (ENSFALG00000006212) #22	SYDE2 (ENSFALG00000024732) #24	DNAI3 (ENSFALG00000006192) #25	MCOLN3 (ENSFALG00000006184) #26	MCOLN2 (ENSFALG00000006182) #27	LPAR3 (ENSFALG00000006179) #28	SSX2IP (ENSFALG00000006170) #29	ENSFALG00000006095	ENSFALG00000006054	CTBS (ENSFALG00000006047) #30	SPATA1 (ENSFALG00000006040) #31	ENSFALG00000025344 #32	RPF1 (ENSFALG00000026271) #33	ENSFALG00000006014 #35	ENSFALG00000028997	DNASE2B (ENSFALG00000028878) #34
Passeriformes_g	ANCESTRAL SPECIES	10	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000155667	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163111.a.b.b
Passeroidea	ANCESTRAL SPECIES	9	ENSGT00940000154043.B	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000155667	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Zebra finch	MODERN SPECIES	30	LRRC8C (ENSTGUG00000006226)	LRRC8B (ENSTGUG00000006230)	KYAT3 (ENSTGUG00000006236)	GTF2B (ENSTGUG00000006258)	PKN2 (ENSTGUG00000006295)	LMO4 (ENSTGUG00000006316)	HS2ST1 (ENSTGUG00000023729)	ENSTGUG00000006332	ENSTGUG00000022678	SH3GLB1 (ENSTGUG00000006338)	ODF2L (ENSTGUG00000006364) #8	ENSTGUG00000006382	CCN1 (ENSTGUG00000006428) #15	DDAH1 (ENSTGUG00000027174) #18	ENSTGUG00000019476	C1orf52 (ENSTGUG00000025081) #22	SYDE2 (ENSTGUG00000006457) #24	DNAI3 (ENSTGUG00000006462) #25	MCOLN3 (ENSTGUG00000006482) #26	MCOLN2 (ENSTGUG00000006506) #27	LPAR3 (ENSTGUG00000006518) #28	SSX2IP (ENSTGUG00000006524) #29	ENSTGUG00000006544	ENSTGUG00000029760	CTBS (ENSTGUG00000006581) #30	SPATA1 (ENSTGUG00000028467) #31	GNG5 (ENSTGUG00000021033) #32	RPF1 (ENSTGUG00000006591) #33	ENSTGUG00000006616 #35	ENSTGUG00000025734	DNASE2B (ENSTGUG00000006605) #34
Neognathae_c	ANCESTRAL SPECIES	7	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b.d	ENSGT00530000064273.a.b.c	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00530000063936.b #36
Golden eagle	MODERN SPECIES	3	KYAT3 (ENSACCG00020002175)	GTF2B (ENSACCG00020002222)	PKN2 (ENSACCG00020002254)	LMO4 (ENSACCG00020002278)	HS2ST1 (ENSACCG00020002293)	ENSACCG00020002313	SH3GLB1 (ENSACCG00020002347)	CLCA1 (ENSACCG00020002757)	ODF2L (ENSACCG00020003016) #8	ENSACCG00020003058	ENSACCG00020003084	ZNHIT6 (ENSACCG00020003123) #13	CCN1 (ENSACCG00020003153) #15	DDAH1 (ENSACCG00020003181) #18	ENSACCG00020003194	C1orf52 (ENSACCG00020003204) #22	SYDE2 (ENSACCG00020003214) #24	DNAI3 (ENSACCG00020003229) #25	MCOLN3 (ENSACCG00020003253) #26	MCOLN2 (ENSACCG00020003279) #27	LPAR3 (ENSACCG00020003306) #28	SSX2IP (ENSACCG00020003322) #29	ENSACCG00020003402	ENSACCG00020003527	CTBS (ENSACCG00020003598) #30	SPATA1 (ENSACCG00020003637) #31	ENSACCG00020003655 #32	RPF1 (ENSACCG00020003670) #33	DNASE2B (ENSACCG00020003684) #34	ENSACCG00020003719 #35	SAMD13 (ENSACCG00020003750) #36
Kakapo	MODERN SPECIES	25	WDR47 (ENSSHBG00005005172)	CLCC1 (ENSSHBG00005005164)	GPSM2 (ENSSHBG00005005157)	ENSSHBG00005005136	STXBP3 (ENSSHBG00005014134)	ENSSHBG00005014116	HENMT1 (ENSSHBG00005014096)	EEIG2 (ENSSHBG00005014073)	SLC25A24 (ENSSHBG00005014056)	VAV3 (ENSSHBG00005014042)	NTNG1 (ENSSHBG00005014029)	ZNHIT6 (ENSSHBG00005013996) #13	CCN1 (ENSSHBG00005013970) #15	DDAH1 (ENSSHBG00005013956) #18	ENSSHBG00005013944	C1orf52 (ENSSHBG00005013938) #22	SYDE2 (ENSSHBG00005013927) #24	CEP19 (ENSSHBG00005013915)	PIGX (ENSSHBG00005013903)	PAK2 (ENSSHBG00005013890)	ENSSHBG00005013862	ENSSHBG00005013851	LTF (ENSSHBG00005013835)	ENSSHBG00005013822	SLCO2A1 (ENSSHBG00005013808)	RYK (ENSSHBG00005013798)	AMOTL2 (ENSSHBG00005013786)	SENP2 (ENSSHBG00005013766)	IGF2BP2 (ENSSHBG00005013718)	TRA2B (ENSSHBG00005013696)	CFAP410 (ENSSHBG00005013690)
Australian saltwater crocodile	MODERN SPECIES	28	LRRC8B (ENSCPRG00005016862)	KYAT3 (ENSCPRG00005016865)	GTF2B (ENSCPRG00005016872)	PKN2 (ENSCPRG00005016876)	ENSCPRG00005016895	HS2ST1 (ENSCPRG00005016903)	ENSCPRG00005016908	SH3GLB1 (ENSCPRG00005016918)	CLCA2 (ENSCPRG00005016929) #7	ODF2L (ENSCPRG00005016938) #8	ENSCPRG00005016951	ENSCPRG00005016956 #13	CCN1 (ENSCPRG00005016962) #15	DDAH1 (ENSCPRG00005016967) #18	ENSCPRG00005016978	C1orf52 (ENSCPRG00005016982) #22	SYDE2 (ENSCPRG00005016985) #24	DNAI3 (ENSCPRG00005016988) #25	MCOLN3 (ENSCPRG00005016998) #26	MCOLN2 (ENSCPRG00005017018) #27	LPAR3 (ENSCPRG00005017021) #28	SSX2IP (ENSCPRG00005017026) #29	ENSCPRG00005017034	ENSCPRG00005017056	CTBS (ENSCPRG00005017066) #30	SPATA1 (ENSCPRG00005017072) #31	ENSCPRG00005017090	RPF1 (ENSCPRG00005017093) #33	DNASE2B (ENSCPRG00005017097) #34	ENSCPRG00005017105 #35	SAMD13 (ENSCPRG00005017120) #36
Lepidosauria	ANCESTRAL SPECIES	11	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.b	ENSGT00940000161655	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b	ENSGT00390000012891 #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36
Episquamata	ANCESTRAL SPECIES	1	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.b	ENSGT00940000161655	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b	ENSGT00390000012891.i #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36
Laterata	ANCESTRAL SPECIES	3	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.b	ENSGT00940000161655	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00940000161548 #7	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00530000064273.a.b	ENSGT00390000012891.i.b #30	ENSGT00390000012891.j #30	ENSGT00390000012891.i.a #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35
Common wall lizard	MODERN SPECIES	14	ENSPMRG00000007842	ENSPMRG00000007853	ENSPMRG00000007863	ENSPMRG00000007879	ENSPMRG00000007933	CLCA2 (ENSPMRG00000007945) #7	ENSPMRG00000007964	ODF2L (ENSPMRG00000007971) #8	ENSPMRG00000007995	ENSPMRG00000008001	ZNHIT6 (ENSPMRG00000008008) #13	ENSPMRG00000008012	CCN1 (ENSPMRG00000008016) #15	DDAH1 (ENSPMRG00000008019) #18	ENSPMRG00000008025	C1orf52 (ENSPMRG00000008029) #22	SYDE2 (ENSPMRG00000008032) #24	ENSPMRG00000008035	DNAI3 (ENSPMRG00000008062) #25	MCOLN3 (ENSPMRG00000008145) #26	MCOLN2 (ENSPMRG00000008153) #27	LPAR3 (ENSPMRG00000008163) #28	SSX2IP (ENSPMRG00000008172) #29	ENSPMRG00000008194	ENSPMRG00000008223 #30	ENSPMRG00000008232 #30	SPATA1 (ENSPMRG00000008241) #31	ENSPMRG00000008254 #32	RPF1 (ENSPMRG00000008261) #33	DNASE2B (ENSPMRG00000008269) #34	ENSPMRG00000008278 #35
Argentine black and white tegu	MODERN SPECIES	16	LMO4 (ENSSMRG00000017414)	HS2ST1 (ENSSMRG00000017412)	ENSSMRG00000017407	SH3GLB1 (ENSSMRG00000017405)	ENSSMRG00000017401	ENSSMRG00000017395	ENSSMRG00000017391	ENSSMRG00000017379	CLCA2 (ENSSMRG00000017375) #7	ODF2L (ENSSMRG00000017368) #8	ENSSMRG00000017350	ZNHIT6 (ENSSMRG00000017343) #13	CCN1 (ENSSMRG00000017342) #15	DDAH1 (ENSSMRG00000017341) #18	ENSSMRG00000017339	C1orf52 (ENSSMRG00000017338) #22	SYDE2 (ENSSMRG00000017337) #24	DNAI3 (ENSSMRG00000017268) #25	MCOLN3 (ENSSMRG00000017266) #26	MCOLN2 (ENSSMRG00000017264) #27	LPAR3 (ENSSMRG00000017263) #28	SSX2IP (ENSSMRG00000017258) #29
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00940000160703	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000154284.a	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892 #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891.i #30	ENSGT00390000003298 #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00390000002634.b #34	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36	ENSGT00940000163111.a.b.b
Elapidae	ANCESTRAL SPECIES	1	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339.x	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892.e #18	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891.i.c #30	ENSGT00390000012891.i.d #30	ENSGT00390000003298.a #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36	ENSGT00940000163111.a.b.b
Elapidae_a	ANCESTRAL SPECIES	7	ENSGT00940000159250	ENSGT00940000160703	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339.x	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892.e #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891.i.c #30	ENSGT00390000012891.i.d #30	ENSGT00390000003298.a #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36	ENSGT00940000163111.a.b.b
Acanthophiinae	ANCESTRAL SPECIES	5	ENSGT00940000160703	ENSGT00940000155827	ENSGT00390000006671	ENSGT00940000154339.x	ENSGT00940000157730	ENSGT00530000063408.B	ENSGT00940000155667	ENSGT00940000154682.C	ENSGT00990000213235	ENSGT00530000063497.b #8	ENSGT00940000163583	ENSGT00390000017201 #13	ENSGT00940000155151.b #15	ENSGT00940000157892.e #18	ENSGT00940000167202	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #24	ENSGT00940000156924 #25	ENSGT00950000183036.a.a #26	ENSGT00950000183036.a.b #27	ENSGT01050000244941.B.d #28	ENSGT00390000007688 #29	ENSGT00390000012891.i.c #30	ENSGT00390000012891.i.d #30	ENSGT00390000003298.a #31	ENSGT01100000263525.a.b.b #32	ENSGT00940000153231.B #33	ENSGT00940000153229.B #35	ENSGT00940000163788	ENSGT00530000063936.b #36	ENSGT00940000163111.a.b.b
Mainland tiger snake	MODERN SPECIES	59	KYAT3 (ENSNSUG00000019996)	GTF2B (ENSNSUG00000019997)	ENSNSUG00000019998	ENSNSUG00000019999	LMO4 (ENSNSUG00000020002)	HS2ST1 (ENSNSUG00000020004)	ENSNSUG00000020006	SH3GLB1 (ENSNSUG00000020007)	CLCA1 (ENSNSUG00000020008)	ENSNSUG00000020010	ENSNSUG00000020011	ZNHIT6 (ENSNSUG00000020012) #13	CCN1 (ENSNSUG00000020016) #15	DDAH1 (ENSNSUG00000020038) #18	ENSNSUG00000020039	C1orf52 (ENSNSUG00000020040) #22	SYDE2 (ENSNSUG00000020041) #24	ENSNSUG00000020043 #25	MCOLN3 (ENSNSUG00000020046) #26	SSX2IP (ENSNSUG00000020049) #29
Eastern brown snake	MODERN SPECIES	13	GTF2B (ENSPTXG00000006399)	ENSPTXG00000006398	LMO4 (ENSPTXG00000006396)	HS2ST1 (ENSPTXG00000006395)	ENSPTXG00000006393	SH3GLB1 (ENSPTXG00000006392)	CLCA1 (ENSPTXG00000006390)	ODF2L (ENSPTXG00000006387) #8	ENSPTXG00000006386	ENSPTXG00000006384	ENSPTXG00000006383	ZNHIT6 (ENSPTXG00000006382) #13	CCN1 (ENSPTXG00000006381) #15	DDAH1 (ENSPTXG00000006379) #18	ENSPTXG00000006378	C1orf52 (ENSPTXG00000006377) #22	SYDE2 (ENSPTXG00000006376) #24	DNAI3 (ENSPTXG00000006375) #25	MCOLN3 (ENSPTXG00000006374) #26	MCOLN2 (ENSPTXG00000006373) #27	LPAR3 (ENSPTXG00000006372) #28	SSX2IP (ENSPTXG00000006371) #29	ENSPTXG00000006370	ENSPTXG00000006369 #30	ENSPTXG00000006367 #30	SPATA1 (ENSPTXG00000006366) #31	ENSPTXG00000006365 #32	RPF1 (ENSPTXG00000006364) #33	ENSPTXG00000006359 #35	ENSPTXG00000006358	SAMD13 (ENSPTXG00000006357) #36
Blue-lipped sea krait	MODERN SPECIES	7441															ENSLLTG00000018005	C1orf52 (ENSLLTG00000018007) #22
Indian cobra	MODERN SPECIES	2	KYAT3 (ENSNNAG00000002457)	GTF2B (ENSNNAG00000002447)	PKN2 (ENSNNAG00000002402)	LMO4 (ENSNNAG00000002380)	HS2ST1 (ENSNNAG00000002365)	ENSNNAG00000002348	SH3GLB1 (ENSNNAG00000002326)	CLCA1 (ENSNNAG00000002295)	ODF2L (ENSNNAG00000002277) #8	ENSNNAG00000002265	ENSNNAG00000002256	ENSNNAG00000002249 #13	CCN1 (ENSNNAG00000002243) #15	DDAH1 (ENSNNAG00000002237) #18	BCL10 (ENSNNAG00000002231) #21	C1orf52 (ENSNNAG00000002225) #22	SYDE2 (ENSNNAG00000002219) #24	DNAI3 (ENSNNAG00000002193) #25	MCOLN3 (ENSNNAG00000002119) #26	MCOLN2 (ENSNNAG00000002081) #27	LPAR3 (ENSNNAG00000002065) #28	SSX2IP (ENSNNAG00000002055) #29	ENSNNAG00000002040 #30	ENSNNAG00000002030 #30	ENSNNAG00000002026 #31	ENSNNAG00000002018 #32	ENSNNAG00000002012	RPF1 (ENSNNAG00000002000) #33	ENSNNAG00000001944 #35	ENSNNAG00000001919	ENSNNAG00000001912
Lizard	MODERN SPECIES	808									ENSACAG00000013228	ZNHIT6 (ENSACAG00000013213) #13	CCN1 (ENSACAG00000013180) #15	ENSACAG00000036798	DDAH1 (ENSACAG00000013151) #18	ENSACAG00000043057	ENSACAG00000013137	C1orf52 (ENSACAG00000034963) #22	SYDE2 (ENSACAG00000013112) #24	DNAI3 (ENSACAG00000013029) #25	MCOLN3 (ENSACAG00000012969) #26	ENSACAG00000023545	MCOLN2 (ENSACAG00000012899) #27	ENSACAG00000027083	LPAR3 (ENSACAG00000041455) #28	SSX2IP (ENSACAG00000005540) #29	ENSACAG00000041285	ENSACAG00000040254	ENSACAG00000005676 #30	ENSACAG00000029634 #30	SPATA1 (ENSACAG00000029579) #31	ENSACAG00000005743 #32	RPF1 (ENSACAG00000005753) #33
tuatara	MODERN SPECIES	1845							ENSSPUG00000015617	CLCA2 (ENSSPUG00000015791) #7	ODF2L (ENSSPUG00000016411) #8	ENSSPUG00000016449	ENSSPUG00000016457 #13	CCN1 (ENSSPUG00000016465) #15	ENSSPUG00000016472	DDAH1 (ENSSPUG00000016477) #18	ENSSPUG00000016484	C1orf52 (ENSSPUG00000016490) #22	SYDE2 (ENSSPUG00000016501) #24	DNAI3 (ENSSPUG00000016535) #25	MCOLN3 (ENSSPUG00000016549) #26	MCOLN2 (ENSSPUG00000016595) #27	LPAR3 (ENSSPUG00000016634) #28	SSX2IP (ENSSPUG00000016641) #29	CTBS (ENSSPUG00000016662) #30	SPATA1 (ENSSPUG00000016732) #31	ENSSPUG00000016754 #32	RPF1 (ENSSPUG00000016759) #33	ENSSPUG00000016791 #35	SAMD13 (ENSSPUG00000016886) #36	ENSSPUG00000016893	ENSSPUG00000016912	TTLL7 (ENSSPUG00000016955)
Anura	ANCESTRAL SPECIES																	ENSGT00390000017398 #22
Leishan spiny toad	MODERN SPECIES	1131																C1orf52 (ENSLLEG00000025164) #22
Coelacanth	MODERN SPECIES	406											ZNHIT6 (ENSLACG00000017347) #13	CCN1 (ENSLACG00000017295) #15	ENSLACG00000017143	DDAH1 (ENSLACG00000017127) #18	ENSLACG00000017073	ENSLACG00000016954 #22	SYDE2 (ENSLACG00000016777) #24	DNAI3 (ENSLACG00000016526) #25	MCOLN3 (ENSLACG00000016339) #26	MCOLN2 (ENSLACG00000016212) #27	ENSLACG00000015737	SSX2IP (ENSLACG00000015496) #29	ENSLACG00000015239	ENSLACG00000014924	CTBS (ENSLACG00000014703) #30	SPATA1 (ENSLACG00000014462) #31	RPF1 (ENSLACG00000014263) #33	uox (ENSLACG00000013884) #35	prkacbb (ENSLACG00000012597)	ASF1A (ENSLACG00000012211)	TTLL7 (ENSLACG00000010892)