Theria	ANCESTRAL SPECIES	3	ENSGT00390000006671	ENSGT00940000154339 #7	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00530000064273.a.b	ENSGT00390000012891	ENSGT00390000003298	ENSGT00940000165410	ENSGT00940000153231.B	ENSGT01100000263525.a.b.b	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788
Eutheria	ANCESTRAL SPECIES		ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT00940000165410	ENSGT00940000153231.B	ENSGT01100000263525.a.b.b	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Artiodactyla	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Suina	ANCESTRAL SPECIES	32	ENSGT00940000154339 #7	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a
Chacoan peccary	MODERN SPECIES	216	PKN2 (ENSCWAG00000014683) #7	ENSCWAG00000014846 #8	HS2ST1 (ENSCWAG00000014885) #9	SELENOF (ENSCWAG00000014949) #10	SH3GLB1 (ENSCWAG00000015014) #11	ENSCWAG00000015195 #12	ENSCWAG00000015913 #13	CLCA1 (ENSCWAG00000016019) #14	CLCA2 (ENSCWAG00000016125) #15	ODF2L (ENSCWAG00000016227) #16	COL24A1 (ENSCWAG00000016291) #17	ZNHIT6 (ENSCWAG00000016707) #18	CCN1 (ENSCWAG00000016845) #19	DDAH1 (ENSCWAG00000016873) #20	BCL10 (ENSCWAG00000016929) #21	C1orf52 (ENSCWAG00000016957) #22	SYDE2 (ENSCWAG00000016990) #23	DNAI3 (ENSCWAG00000017052) #24	PCDH20 (ENSCWAG00000017337) #25	TDRD3 (ENSCWAG00000017371) #26	ENSCWAG00000017495 #27	DIAPH3 (ENSCWAG00000017632) #28	ENSCWAG00000019391 #29	ENSCWAG00000019419 #30	PCDH17 (ENSCWAG00000019432) #31	ENSCWAG00000019461 #32	ENSCWAG00000019477 #33	ENSCWAG00000019495 #34	OLFM4 (ENSCWAG00000019527) #35	ENSCWAG00000019571 #36	PCDH8 (ENSCWAG00000000054) #37
Pig	MODERN SPECIES	12	ENSSSCG00000047605 #8	HS2ST1 (ENSSSCG00000022032) #9	SELENOF (ENSSSCG00000030125) #10	SH3GLB1 (ENSSSCG00000006930) #11	ENSSSCG00000059930 #13	ENSSSCG00000006932 #13	CLCA1 (ENSSSCG00000006933) #14	CLCA2 (ENSSSCG00000006935) #15	ODF2L (ENSSSCG00000006936) #16	COL24A1 (ENSSSCG00000031738) #17	ZNHIT6 (ENSSSCG00000006939) #18	CCN1 (ENSSSCG00000006940) #19	ENSSSCG00000056532	DDAH1 (ENSSSCG00000040735) #20	BCL10 (ENSSSCG00000025691) #21	C1orf52 (ENSSSCG00000026772) #22	SYDE2 (ENSSSCG00000006947) #23	DNAI3 (ENSSSCG00000006950) #24	MCOLN3 (ENSSSCG00000023745)
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00910000147804	ENSGT00530000063936.b
Camelidae	ANCESTRAL SPECIES	11	ENSGT00940000154339 #7	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.d	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b
Arabian camel	MODERN SPECIES	4	PKN2 (ENSCDRG00005014192) #7	LMO4 (ENSCDRG00005014134) #8	HS2ST1 (ENSCDRG00005014055) #9	SELENOF (ENSCDRG00005013974) #10	SH3GLB1 (ENSCDRG00005013701) #11	ENSCDRG00005013259	CLCA4 (ENSCDRG00005013128) #13	CLCA1 (ENSCDRG00005012990) #14	CLCA2 (ENSCDRG00005012881) #15	ODF2L (ENSCDRG00005012713) #16	COL24A1 (ENSCDRG00005012526) #17	ZNHIT6 (ENSCDRG00005012303) #18	CCN1 (ENSCDRG00005012224) #19	DDAH1 (ENSCDRG00005011995) #20	BCL10 (ENSCDRG00005011941) #21	C1orf52 (ENSCDRG00005011873) #22	SYDE2 (ENSCDRG00005011826) #23	DNAI3 (ENSCDRG00005011768) #24	MCOLN3 (ENSCDRG00005011428)	MCOLN2 (ENSCDRG00005011158)	LPAR3 (ENSCDRG00005011117)	SSX2IP (ENSCDRG00005011054)	CTBS (ENSCDRG00005011010)	SPATA1 (ENSCDRG00005010904)	GNG5 (ENSCDRG00005010830)	RPF1 (ENSCDRG00005010749)	DNASE2B (ENSCDRG00005010674)	ENSCDRG00005010589	ENSCDRG00005010571	SAMD13 (ENSCDRG00005010489)	ENSCDRG00005010452
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Cetacea	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00950000186157	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Odontoceti	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00950000186157	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000010089.e.a	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078
Dolphin	MODERN SPECIES	1393												ZNHIT6 (ENSTTRG00000001331) #18	CYR61 (ENSTTRG00000001330) #19	DDAH1 (ENSTTRG00000001329) #20	BCL10 (ENSTTRG00000001328) #21	CUNH1orf52 (ENSTTRG00000001327) #22	SYDE2 (ENSTTRG00000001326) #23	DNAI3 (ENSTTRG00000001325) #24
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000154276.jb.a.c.a.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT01100000263605.b.a	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078	ENSGT01030000235287
Vaquita	MODERN SPECIES		SH3GLB1 (ENSPSNG00000012379) #11	ENSPSNG00000012254	ENSPSNG00000012179	ENSPSNG00000012108	CLCA4 (ENSPSNG00000011942) #13	CLCA1 (ENSPSNG00000011200) #14	CLCA2 (ENSPSNG00000010949) #15	ODF2L (ENSPSNG00000010772) #16	ENSPSNG00000010684	ENSPSNG00000010645	COL24A1 (ENSPSNG00000010075) #17	ZNHIT6 (ENSPSNG00000009894) #18	CCN1 (ENSPSNG00000009783) #19	DDAH1 (ENSPSNG00000004030) #20	BCL10 (ENSPSNG00000004004) #21	C1orf52 (ENSPSNG00000003984) #22	SYDE2 (ENSPSNG00000003962) #23	DNAI3 (ENSPSNG00000003943) #24	MCOLN3 (ENSPSNG00000003890)	MCOLN2 (ENSPSNG00000003843)	LPAR3 (ENSPSNG00000003830)	SSX2IP (ENSPSNG00000003809)	GNG5 (ENSPSNG00000003794)	RPF1 (ENSPSNG00000003772)	ENSPSNG00000003753	ENSPSNG00000003738	SAMD13 (ENSPSNG00000003722)	PRKACB (ENSPSNG00000003284)	TTLL7 (ENSPSNG00000003000)	ENSPSNG00000002961	ADGRL2 (ENSPSNG00000002844)
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000154276.jb.a.c.a.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT01100000263605.b.a	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000010089.e.a	ENSGT00910000145621	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078
Beluga whale	MODERN SPECIES	74	ENSDLEG00000017239	SELENOF (ENSDLEG00000017224) #10	SH3GLB1 (ENSDLEG00000017190) #11	ENSDLEG00000017178	ENSDLEG00000017169	CLCA4 (ENSDLEG00000017123) #13	CLCA1 (ENSDLEG00000016981) #14	CLCA2 (ENSDLEG00000016914) #15	ODF2L (ENSDLEG00000016888) #16	ENSDLEG00000016875	ENSDLEG00000016857 #17	ZNHIT6 (ENSDLEG00000016847) #18	CYR61 (ENSDLEG00000016833) #19	DDAH1 (ENSDLEG00000016798) #20	BCL10 (ENSDLEG00000016793) #21	CUNH1orf52 (ENSDLEG00000016784) #22	SYDE2 (ENSDLEG00000016765) #23	DNAI3 (ENSDLEG00000016672) #24	MCOLN3 (ENSDLEG00000016634)	MCOLN2 (ENSDLEG00000016543)	LPAR3 (ENSDLEG00000016529)	SSX2IP (ENSDLEG00000016495)	ENSDLEG00000016476	ENSDLEG00000016469	RPF1 (ENSDLEG00000016438)	DNASE2B (ENSDLEG00000016427)	ENSDLEG00000016414	SAMD13 (ENSDLEG00000016382)	PRKACB (ENSDLEG00000016303)	TTLL7 (ENSDLEG00000016218)	ENSDLEG00000016193
Narwhal	MODERN SPECIES	304	ENSMMNG00015006184	ENSMMNG00015006203	CLCA4 (ENSMMNG00015006219) #13	CLCA1 (ENSMMNG00015006324) #14	CLCA2 (ENSMMNG00015006483) #15	ODF2L (ENSMMNG00015006542) #16	ENSMMNG00015006593	COL24A1 (ENSMMNG00015006630) #17	ENSMMNG00015006664	ZNHIT6 (ENSMMNG00015006688) #18	CCN1 (ENSMMNG00015006718) #19	ENSMMNG00015006737	ENSMMNG00015006746	DDAH1 (ENSMMNG00015006769) #20	BCL10 (ENSMMNG00015006803) #21	C1orf52 (ENSMMNG00015006824) #22	SYDE2 (ENSMMNG00015006844) #23	DNAI3 (ENSMMNG00015006897) #24	MCOLN3 (ENSMMNG00015006977)	MCOLN2 (ENSMMNG00015007034)	LPAR3 (ENSMMNG00015007073)	SSX2IP (ENSMMNG00015007092)	ENSMMNG00015007123	ENSMMNG00015007171	RPF1 (ENSMMNG00015007188)	DNASE2B (ENSMMNG00015007213)	ENSMMNG00015007239	SAMD13 (ENSMMNG00015007257)	ENSMMNG00015007272	PRKACB (ENSMMNG00015007361)	TTLL7 (ENSMMNG00015007554)
Sperm whale	MODERN SPECIES	15	LMO4 (ENSPCTG00005009288) #8	HS2ST1 (ENSPCTG00005009338) #9	SELENOF (ENSPCTG00005009387) #10	SH3GLB1 (ENSPCTG00005009480) #11	ENSPCTG00005009928	ENSPCTG00005009991	CLCA4 (ENSPCTG00005010077) #13	CLCA1 (ENSPCTG00005010226) #14	CLCA2 (ENSPCTG00005010389) #15	ODF2L (ENSPCTG00005010473) #16	COL24A1 (ENSPCTG00005010594) #17	ENSPCTG00005010695	ZNHIT6 (ENSPCTG00005010735) #18	CCN1 (ENSPCTG00005010887) #19	BCL10 (ENSPCTG00005010972) #21	C4H1orf52 (ENSPCTG00005011208) #22	SYDE2 (ENSPCTG00005011255) #23	DNAI3 (ENSPCTG00005011337) #24	MCOLN3 (ENSPCTG00005011843)	MCOLN2 (ENSPCTG00005012138)	LPAR3 (ENSPCTG00005012306)	SSX2IP (ENSPCTG00005012325)	ENSPCTG00005012379	ENSPCTG00005012400	ENSPCTG00005012437	GNG5 (ENSPCTG00005012478)	RPF1 (ENSPCTG00005012513)	ENSPCTG00005012591	ENSPCTG00005012636	SAMD13 (ENSPCTG00005012711)	PRKACB (ENSPCTG00005012881)
Blue whale	MODERN SPECIES		ENSBMSG00010011649	ENSBMSG00010011641	ENSBMSG00010011631	ENSBMSG00010011618 #13	ENSBMSG00010011578 #13	CLCA1 (ENSBMSG00010011556) #14	CLCA2 (ENSBMSG00010011495) #15	ODF2L (ENSBMSG00010011443) #16	ENSBMSG00010011419	COL24A1 (ENSBMSG00010011347) #17	ZNHIT6 (ENSBMSG00010011279) #18	CCN1 (ENSBMSG00010011251) #19	ENSBMSG00010011239	DDAH1 (ENSBMSG00010011208) #20	ENSBMSG00010011187 #21	C1orf52 (ENSBMSG00010011167) #22	SYDE2 (ENSBMSG00010011151) #23	DNAI3 (ENSBMSG00010011066) #24	MCOLN3 (ENSBMSG00010011002)	MCOLN2 (ENSBMSG00010010954)	ENSBMSG00010010924	LPAR3 (ENSBMSG00010010913)	SSX2IP (ENSBMSG00010010888)	ENSBMSG00010010877	SPATA1 (ENSBMSG00010010864)	ENSBMSG00010010850	RPF1 (ENSBMSG00010010838)	ENSBMSG00010010830	ENSBMSG00010010810	ENSBMSG00010010794	SAMD13 (ENSBMSG00010010774)
Pecora	ANCESTRAL SPECIES	2	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT01000000215412	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Yarkand deer	MODERN SPECIES	12	ENSCHYG00000017416	ENSCHYG00000017521	ENSCHYG00000017942	CLCA4 (ENSCHYG00000017997) #13	ENSCHYG00000018086	CLCA1 (ENSCHYG00000018130) #14	CLCA2 (ENSCHYG00000018274) #15	ODF2L (ENSCHYG00000018506) #16	COL24A1 (ENSCHYG00000019031) #17	ZNHIT6 (ENSCHYG00000019277) #18	CCN1 (ENSCHYG00000019490) #19	ENSCHYG00000019543	ENSCHYG00000019567	DDAH1 (ENSCHYG00000019587) #20	BCL10 (ENSCHYG00000019711) #21	C1orf52 (ENSCHYG00000019772) #22	SYDE2 (ENSCHYG00000019844) #23	DNAI3 (ENSCHYG00000019958) #24	MCOLN3 (ENSCHYG00000021236)	MCOLN2 (ENSCHYG00000021424)	LPAR3 (ENSCHYG00000021602)	ENSCHYG00000021637	CTBS (ENSCHYG00000021813)	SPATA1 (ENSCHYG00000021860)	ENSCHYG00000022011	RPF1 (ENSCHYG00000022044)	DNASE2B (ENSCHYG00000022151)	ENSCHYG00000022258	ENSCHYG00000022387	PRKACB (ENSCHYG00000022683)	ENSCHYG00000024821
Percora_a	ANCESTRAL SPECIES	1	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT01000000215412	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Bovidae	ANCESTRAL SPECIES	1	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT01000000215412	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Caprinae	ANCESTRAL SPECIES	2	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT01000000215412	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00910000147804	ENSGT00530000063936.b
Goat	DUPLICATION
Goat	MODERN SPECIES	22	ENSCHIG00000018965	SH3GLB1 (ENSCHIG00000026662) #11	ENSCHIG00000007867	ENSCHIG00000002248	CLCA4 (ENSCHIG00000021877) #13	CLCA1 (ENSCHIG00000011719) #14	CLCA2 (ENSCHIG00000027130) #15	ODF2L (ENSCHIG00000025854) #16	ENSCHIG00000017228	COL24A1 (ENSCHIG00000020640) #17	ZNHIT6 (ENSCHIG00000020100) #18	CCN1 (ENSCHIG00000027269) #19	ENSCHIG00000011990	DDAH1 (ENSCHIG00000024596) #20	BCL10 (ENSCHIG00000011561) #21	ENSCHIG00000026751 #22	SYDE2 (ENSCHIG00000014781) #23	DNAI3 (ENSCHIG00000017079) #24	MCOLN3 (ENSCHIG00000018773)	MCOLN2 (ENSCHIG00000008729)	LPAR3 (ENSCHIG00000017316)	SSX2IP (ENSCHIG00000025764)	CTBS (ENSCHIG00000022826)	SPATA1 (ENSCHIG00000004028)	GNG5 (ENSCHIG00000016183)	ENSCHIG00000012566	DNASE2B (ENSCHIG00000018531)	ENSCHIG00000025541	ENSCHIG00000014514	PRKACB (ENSCHIG00000024391)	TTLL7 (ENSCHIG00000017102)
Goat	MODERN SPECIES	22	ENSCHIG00000009426	ENSCHIG00000016560	ENSCHIG00000010218	CD1D (ENSCHIG00000008779)	ENSCHIG00000012337	KIRREL1 (ENSCHIG00000021405)	ENSCHIG00000027085	ENSCHIG00000015324	ENSCHIG00000014091	ENSCHIG00000019069	FCRL4 (ENSCHIG00000001070)	ENSCHIG00000025439	ENSCHIG00000011451	ETV3 (ENSCHIG00000017949)	ENSCHIG00000023056	ENSCHIG00000009592 #22	ARHGEF11 (ENSCHIG00000025394)	LRRC71 (ENSCHIG00000005840)	PEAR1 (ENSCHIG00000024120)	NTRK1 (ENSCHIG00000023266)	INSRR (ENSCHIG00000020115)	SH2D2A (ENSCHIG00000019998)	PRCC (ENSCHIG00000024652)	HDGF (ENSCHIG00000017076)	MRPL24 (ENSCHIG00000015041)	METTL25B (ENSCHIG00000022856)	ISG20L2 (ENSCHIG00000024024)	CRABP2 (ENSCHIG00000009097)	NES (ENSCHIG00000026388)	BCAN (ENSCHIG00000011650)	HAPLN2 (ENSCHIG00000025407)
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020006050	HS2ST1 (ENSOARG00020005954) #9	SELENOF (ENSOARG00020005902) #10	SH3GLB1 (ENSOARG00020005783) #11	ENSOARG00020003537	ENSOARG00020002384	CLCA4 (ENSOARG00020002227) #13	CLCA1 (ENSOARG00020002201) #14	CLCA2 (ENSOARG00020002169) #15	ODF2L (ENSOARG00020002095) #16	COL24A1 (ENSOARG00020002041) #17	CCN1 (ENSOARG00020001971) #19	DDAH1 (ENSOARG00020001916) #20	ENSOARG00020001899	BCL10 (ENSOARG00020001886) #21	C1orf52 (ENSOARG00020001875) #22	SYDE2 (ENSOARG00020001859) #23	DNAI3 (ENSOARG00020001533) #24	ENSOARG00020001462	MCOLN3 (ENSOARG00020001362)	MCOLN2 (ENSOARG00020001324)	LPAR3 (ENSOARG00020001315)	SSX2IP (ENSOARG00020001297)	CTBS (ENSOARG00020001255)	SPATA1 (ENSOARG00020001225)	GNG5 (ENSOARG00020001205)	RPF1 (ENSOARG00020001191)	DNASE2B (ENSOARG00020001163)	ENSOARG00020001133	ENSOARG00020001115	SAMD13 (ENSOARG00020001103)
Bovinae	ANCESTRAL SPECIES	1	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT01000000215412	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
American bison	MODERN SPECIES	3325	HS2ST1 (ENSBBBG00000006101) #9	SELENOF (ENSBBBG00000008413) #10	SH3GLB1 (ENSBBBG00000007287) #11	ENSBBBG00000023469	ENSBBBG00000008313	CLCA4 (ENSBBBG00000023614) #13	CLCA1 (ENSBBBG00000006178) #14	CLCA2 (ENSBBBG00000023667) #15	ODF2L (ENSBBBG00000023750) #16	COL24A1 (ENSBBBG00000007290) #17	ZNHIT6 (ENSBBBG00000006216) #18	CCN1 (ENSBBBG00000023910) #19	ENSBBBG00000023925	DDAH1 (ENSBBBG00000023962) #20	BCL10 (ENSBBBG00000023973) #21	C1orf52 (ENSBBBG00000023979) #22	SYDE2 (ENSBBBG00000008975) #23	DNAI3 (ENSBBBG00000024063) #24	MCOLN3 (ENSBBBG00000024117)	MCOLN2 (ENSBBBG00000024164)	LPAR3 (ENSBBBG00000024176)	SSX2IP (ENSBBBG00000008990)	CTBS (ENSBBBG00000024262)	SPATA1 (ENSBBBG00000024290)	ENSBBBG00000024302	RPF1 (ENSBBBG00000008889)	DNASE2B (ENSBBBG00000006341)	ENSBBBG00000006366	SAMD13 (ENSBBBG00000024450)	ENSBBBG00000024455	PRKACB (ENSBBBG00000024703)
Bos	ANCESTRAL SPECIES		ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT01000000215412	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Bos_b	ANCESTRAL SPECIES	1	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.b.b.b.b.a.b.a.b.a.a	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT01000000215412	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Hybrid Bos Indicus	MODERN SPECIES	22	SH3GLB1 (ENSBIXG00005029220) #11	ENSBIXG00005001721	ENSBIXG00005001767	ENSBIXG00005029153	CLCA4 (ENSBIXG00005029144) #13	CLCA1 (ENSBIXG00005005168) #14	CLCA2 (ENSBIXG00005029083) #15	ENSBIXG00005001995	ODF2L (ENSBIXG00005005132) #16	COL24A1 (ENSBIXG00005028988) #17	ZNHIT6 (ENSBIXG00005002133) #18	CCN1 (ENSBIXG00005028896) #19	ENSBIXG00005002260	DDAH1 (ENSBIXG00005002285) #20	BCL10 (ENSBIXG00005028824) #21	C1orf52 (ENSBIXG00005006646) #22	SYDE2 (ENSBIXG00005028777) #23	DNAI3 (ENSBIXG00005028759) #24	ENSBIXG00005028687	MCOLN3 (ENSBIXG00005028662)	MCOLN2 (ENSBIXG00005028583)	LPAR3 (ENSBIXG00005028548)	SSX2IP (ENSBIXG00005028521)	CTBS (ENSBIXG00005028483)	SPATA1 (ENSBIXG00005028480)	ENSBIXG00005028437	ENSBIXG00005004893	RPF1 (ENSBIXG00005028403)	ENSBIXG00005028353	DNASE2B (ENSBIXG00005004867)	ENSBIXG00005028288
Cow	MODERN SPECIES	22	HS2ST1 (ENSBTAG00000017595) #9	SELENOF (ENSBTAG00000052268) #10	SH3GLB1 (ENSBTAG00000031171) #11	ENSBTAG00000051311	ENSBTAG00000021501	CLCA3 (ENSBTAG00000016712)	CLCA4 (ENSBTAG00000017357) #13	CLCA1 (ENSBTAG00000008161) #14	CLCA2 (ENSBTAG00000038215) #15	ODF2L (ENSBTAG00000012907) #16	ENSBTAG00000048312 #17	ZNHIT6 (ENSBTAG00000021051) #18	CCN1 (ENSBTAG00000009844) #19	DDAH1 (ENSBTAG00000034776) #20	BCL10 (ENSBTAG00000013851) #21	C3H1orf52 (ENSBTAG00000016326) #22	SYDE2 (ENSBTAG00000003444) #23	DNAI3 (ENSBTAG00000013778) #24	MCOLN3 (ENSBTAG00000016982)	MCOLN2 (ENSBTAG00000046773)	LPAR3 (ENSBTAG00000003791)	SSX2IP (ENSBTAG00000018942)	CTBS (ENSBTAG00000005782)	SPATA1 (ENSBTAG00000020010)	GNG5 (ENSBTAG00000008122)	RPF1 (ENSBTAG00000008118)	UOX (ENSBTAG00000024255)	DNASE2B (ENSBTAG00000010445)	ENSBTAG00000053100	SAMD13 (ENSBTAG00000053482)	SAMD13 (ENSBTAG00000007724)
Bos_a	ANCESTRAL SPECIES	1	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.a	ENSGT00940000157555.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT01000000215412	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078
Domestic yak	MODERN SPECIES	22	SELENOF (ENSBGRG00000004000) #10	SH3GLB1 (ENSBGRG00000004071) #11	ENSBGRG00000004351	CLCA4 (ENSBGRG00000004774) #13	CLCA1 (ENSBGRG00000006534) #14	CLCA2 (ENSBGRG00000006661) #15	ENSBGRG00000006706	ODF2L (ENSBGRG00000006729) #16	COL24A1 (ENSBGRG00000006871) #17	ENSBGRG00000000235	ZNHIT6 (ENSBGRG00000000263) #18	CCN1 (ENSBGRG00000000313) #19	ENSBGRG00000000337	DDAH1 (ENSBGRG00000000347) #20	BCL10 (ENSBGRG00000000384) #21	C1orf52 (ENSBGRG00000000411) #22	SYDE2 (ENSBGRG00000000456) #23	DNAI3 (ENSBGRG00000000494) #24	MCOLN3 (ENSBGRG00000000709)	MCOLN2 (ENSBGRG00000000755)	ENSBGRG00000000797 ##36	LPAR3 (ENSBGRG00000000803)	SSX2IP (ENSBGRG00000000833)	CTBS (ENSBGRG00000000887)	SPATA1 (ENSBGRG00000000917)	ENSBGRG00000000963	RPF1 (ENSBGRG00000000983)	ENSBGRG00000001021	DNASE2B (ENSBGRG00000001063)	ENSBGRG00000001096	PRKACB (ENSBGRG00000001167)
Wild yak	MODERN SPECIES	151	HS2ST1 (ENSBMUG00000017400) #9	SELENOF (ENSBMUG00000017480) #10	SH3GLB1 (ENSBMUG00000017608) #11	ENSBMUG00000017730	ENSBMUG00000017762	CLCA4 (ENSBMUG00000017782) #13	CLCA1 (ENSBMUG00000017812) #14	CLCA2 (ENSBMUG00000017843) #15	ODF2L (ENSBMUG00000017919) #16	COL24A1 (ENSBMUG00000017985) #17	ENSBMUG00000018023	ZNHIT6 (ENSBMUG00000018058) #18	CCN1 (ENSBMUG00000018082) #19	DDAH1 (ENSBMUG00000018146) #20	BCL10 (ENSBMUG00000018176) #21	C1orf52 (ENSBMUG00000018196) #22	SYDE2 (ENSBMUG00000018219) #23	DNAI3 (ENSBMUG00000018237) #24	MCOLN3 (ENSBMUG00000018289)
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	339	HS2ST1 (ENSMMSG00000004654) #9	SELENOF (ENSMMSG00000004702) #10	SH3GLB1 (ENSMMSG00000004787) #11	ENSMMSG00000005173	ENSMMSG00000005817	CLCA4 (ENSMMSG00000006195) #13	CLCA1 (ENSMMSG00000006239) #14	CLCA2 (ENSMMSG00000006290) #15	ODF2L (ENSMMSG00000006331) #16	COL24A1 (ENSMMSG00000006437) #17	ZNHIT6 (ENSMMSG00000006731) #18	CCN1 (ENSMMSG00000006870) #19	ENSMMSG00000006904	DDAH1 (ENSMMSG00000006918) #20	BCL10 (ENSMMSG00000006944) #21	C1orf52 (ENSMMSG00000006971) #22	SYDE2 (ENSMMSG00000006993) #23	DNAI3 (ENSMMSG00000007042) #24	MCOLN3 (ENSMMSG00000007252)	MCOLN2 (ENSMMSG00000007452)	LPAR3 (ENSMMSG00000007558)	SSX2IP (ENSMMSG00000007576)	CTBS (ENSMMSG00000007643)	ENSMMSG00000007667	ENSMMSG00000007684	ENSMMSG00000007703	DNASE2B (ENSMMSG00000007733)	ENSMMSG00000007774	ENSMMSG00000007862	SAMD13 (ENSMMSG00000007874)	PRKACB (ENSMMSG00000007994)
Siberian musk deer	MODERN SPECIES	243														ENSMMSG00000010912	ENSMMSG00000010903	ENSMMSG00000010889 #22	SRBD1 (ENSMMSG00000010782)	PRKCE (ENSMMSG00000010644)	ENSMMSG00000010613	EPAS1 (ENSMMSG00000010543)	TMEM247 (ENSMMSG00000010509)	ATP6V1E2 (ENSMMSG00000010493)	RHOQ (ENSMMSG00000010463)	PIGF (ENSMMSG00000010411)	CRIPT (ENSMMSG00000010380)	SOCS5 (ENSMMSG00000010366)	ENSMMSG00000010348	MCFD2 (ENSMMSG00000010275)	TTC7A (ENSMMSG00000010218)	STPG4 (ENSMMSG00000010164)	CALM2 (ENSMMSG00000010115)
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b
Equus	ANCESTRAL SPECIES	3	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416.j #13	ENSGT00940000160416.i.b #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078
Donkey	MODERN SPECIES	7	SH3GLB1 (ENSEASG00005013235) #11	ENSEASG00005013238	ENSEASG00005013293 #13	ENSEASG00005014000 #13	ENSEASG00005032323 #13	ENSEASG00005013994 #13	CLCA1 (ENSEASG00005014026) #14	CLCA2 (ENSEASG00005014061) #15	ODF2L (ENSEASG00005014068) #16	COL24A1 (ENSEASG00005024938) #17	ZNHIT6 (ENSEASG00005014084) #18	CCN1 (ENSEASG00005014085) #19	ENSEASG00005034815	DDAH1 (ENSEASG00005014087) #20	BCL10 (ENSEASG00005014089) #21	C1orf52 (ENSEASG00005014090) #22	SYDE2 (ENSEASG00005023929) #23	DNAI3 (ENSEASG00005014094) #24	MCOLN3 (ENSEASG00005014101)	MCOLN2 (ENSEASG00005014110)	LPAR3 (ENSEASG00005014129)	SSX2IP (ENSEASG00005014134)	CTBS (ENSEASG00005014138)	SPATA1 (ENSEASG00005014155)	ENSEASG00005033635	RPF1 (ENSEASG00005014158)	ENSEASG00005014161	DNASE2B (ENSEASG00005014162)	ENSEASG00005024895	PRKACB (ENSEASG00005014168)	TTLL7 (ENSEASG00005014170)
Horse	MODERN SPECIES	26	ENSECAG00000052391	LMO4 (ENSECAG00000025150) #8	HS2ST1 (ENSECAG00000000800) #9	SH3GLB1 (ENSECAG00000009160) #11	ENSECAG00000014656	ENSECAG00000017843 #13	ENSECAG00000035060 #13	CLCA1 (ENSECAG00000057201) #14	CLCA2 (ENSECAG00000020901) #15	ODF2L (ENSECAG00000022058) #16	COL24A1 (ENSECAG00000023199) #17	ZNHIT6 (ENSECAG00000024978) #18	CCN1 (ENSECAG00000024993) #19	DDAH1 (ENSECAG00000024997) #20	BCL10 (ENSECAG00000025005) #21	C5H1orf52 (ENSECAG00000025029) #22	SYDE2 (ENSECAG00000025133) #23	DNAI3 (ENSECAG00000000764) #24	MCOLN3 (ENSECAG00000007249)	MCOLN2 (ENSECAG00000011008)	LPAR3 (ENSECAG00000049816)	SSX2IP (ENSECAG00000012872)	ENSECAG00000048925	ENSECAG00000056260	CTBS (ENSECAG00000015643)	SPATA1 (ENSECAG00000016351)	GNG5 (ENSECAG00000048494)	RPF1 (ENSECAG00000019661)	UOX (ENSECAG00000021582)	DNASE2B (ENSECAG00000020335)	ENSECAG00000028442
Chiroptera	ANCESTRAL SPECIES		ENSGT00940000154339 #7	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b
Megabat	MODERN SPECIES	1749													CCN1 (ENSPVAG00000002811) #19	DDAH1 (ENSPVAG00000002809) #20	BCL10 (ENSPVAG00000002808) #21	C1orf52 (ENSPVAG00000002806) #22
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00940000154339 #7	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b
Greater horseshoe bat	DUPLICATION
Greater horseshoe bat	MODERN SPECIES	11	IQSEC1 (ENSRFEG00010004769)	ENSRFEG00010004850	NUP210 (ENSRFEG00010004861)	ENSRFEG00010004889	ENSRFEG00010004894	FBLN2 (ENSRFEG00010004908)	WNT7A (ENSRFEG00010004927)	GK5 (ENSRFEG00010004962)	XRN1 (ENSRFEG00010004992)	ATR (ENSRFEG00010005072)	PLS1 (ENSRFEG00010005106)	TRPC1 (ENSRFEG00010005127)	PCOLCE2 (ENSRFEG00010005148)	PAQR9 (ENSRFEG00010005166)	U2SURP (ENSRFEG00010005180)	ENSRFEG00010005199 #22	CHST2 (ENSRFEG00010005206)	SLC9A9 (ENSRFEG00010005221)	DIPK2A (ENSRFEG00010005250)	ENSRFEG00010005260	PLOD2 (ENSRFEG00010005288)	PLSCR4 (ENSRFEG00010005346)	ENSRFEG00010005376	PLSCR1 (ENSRFEG00010005408)	PLSCR5 (ENSRFEG00010005460)	ZIC4 (ENSRFEG00010005534)	ZIC1 (ENSRFEG00010005593)	ENSRFEG00010005605	AGTR1 (ENSRFEG00010005628)	CPB1 (ENSRFEG00010005647)	CPA3 (ENSRFEG00010005703)
Greater horseshoe bat	MODERN SPECIES	27	LMO4 (ENSRFEG00010011036) #8	HS2ST1 (ENSRFEG00010010982) #9	SELENOF (ENSRFEG00010010937) #10	SH3GLB1 (ENSRFEG00010010748) #11	ENSRFEG00010010677	CLCA4 (ENSRFEG00010010608) #13	CLCA1 (ENSRFEG00010010535) #14	CLCA2 (ENSRFEG00010010308) #15	ODF2L (ENSRFEG00010010033) #16	ENSRFEG00010009977	COL24A1 (ENSRFEG00010009929) #17	ZNHIT6 (ENSRFEG00010009748) #18	CCN1 (ENSRFEG00010009708) #19	DDAH1 (ENSRFEG00010009596) #20	BCL10 (ENSRFEG00010009517) #21	ENSRFEG00010009469 #22	SYDE2 (ENSRFEG00010009428) #23	DNAI3 (ENSRFEG00010009062) #24	MCOLN3 (ENSRFEG00010008879)	MCOLN2 (ENSRFEG00010008712)	LPAR3 (ENSRFEG00010008696)	SSX2IP (ENSRFEG00010008650)	ENSRFEG00010008577	ENSRFEG00010008537	SPATA1 (ENSRFEG00010008499)	GNG5 (ENSRFEG00010008455)	ENSRFEG00010008327	DNASE2B (ENSRFEG00010008256)	ENSRFEG00010008224	ENSRFEG00010008199	ENSRFEG00010008163
Carnivora	ANCESTRAL SPECIES	1	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Felidae	ANCESTRAL SPECIES	10	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b.c	ENSGT00990000205119
Panthera	ANCESTRAL SPECIES	4	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b.c	ENSGT00990000205119
Panthera_a	ANCESTRAL SPECIES	11	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b.c	ENSGT00990000205119
lion	MODERN SPECIES	8	HS2ST1 (ENSPLOG00000008504) #9	H2AZ1 (ENSPLOG00000008536)	SELENOF (ENSPLOG00000008569) #10	SH3GLB1 (ENSPLOG00000008636) #11	ENSPLOG00000008847	CLCA4 (ENSPLOG00000009130) #13	CLCA1 (ENSPLOG00000009243) #14	CLCA2 (ENSPLOG00000009343) #15	ODF2L (ENSPLOG00000009448) #16	COL24A1 (ENSPLOG00000009722) #17	ZNHIT6 (ENSPLOG00000009990) #18	CCN1 (ENSPLOG00000010073) #19	ENSPLOG00000010159	DDAH1 (ENSPLOG00000010185) #20	BCL10 (ENSPLOG00000010271) #21	C1orf52 (ENSPLOG00000010306) #22	SYDE2 (ENSPLOG00000010350) #23	DNAI3 (ENSPLOG00000010446) #24	ENSPLOG00000010679	MCOLN3 (ENSPLOG00000010724)	MCOLN2 (ENSPLOG00000010836)	LPAR3 (ENSPLOG00000010887)	SSX2IP (ENSPLOG00000005570)	CTBS (ENSPLOG00000005615)	SPATA1 (ENSPLOG00000005659)	GNG5 (ENSPLOG00000005675)	RPF1 (ENSPLOG00000005694)	DNASE2B (ENSPLOG00000005726)	ENSPLOG00000005767	SAMD13 (ENSPLOG00000005808)	ENSPLOG00000005835
leopard	MODERN SPECIES	62	HS2ST1 (ENSPPRG00000001594) #9	SELENOF (ENSPPRG00000003036) #10	SH3GLB1 (ENSPPRG00000005342) #11	ENSPPRG00000008796	CLCA4 (ENSPPRG00000010047) #13	CLCA1 (ENSPPRG00000010379) #14	CLCA2 (ENSPPRG00000016194) #15	ODF2L (ENSPPRG00000024565) #16	ENSPPRG00000024439 ##36	COL24A1 (ENSPPRG00000024037) #17	ZNHIT6 (ENSPPRG00000023340) #18	CCN1 (ENSPPRG00000023322) #19	ENSPPRG00000021077	DDAH1 (ENSPPRG00000000442) #20	BCL10 (ENSPPRG00000000878) #21	C1orf52 (ENSPPRG00000001522) #22	SYDE2 (ENSPPRG00000002218) #23	DNAI3 (ENSPPRG00000004873) #24	MCOLN3 (ENSPPRG00000006193)	MCOLN2 (ENSPPRG00000006914)	LPAR3 (ENSPPRG00000006969)	SSX2IP (ENSPPRG00000008492)	ENSPPRG00000008708	CTBS (ENSPPRG00000008795)	SPATA1 (ENSPPRG00000009258)	GNG5 (ENSPPRG00000009563)	RPF1 (ENSPPRG00000009777)	ENSPPRG00000009883	ENSPPRG00000010218	ENSPPRG00000010285	ENSPPRG00000010565
Tiger	MODERN SPECIES	126	HS2ST1 (ENSPTIG00000010901) #9	SELENOF (ENSPTIG00000011115) #10	SH3GLB1 (ENSPTIG00000011684) #11	ENSPTIG00000012017	ENSPTIG00000012116	CLCA4 (ENSPTIG00000012168) #13	CLCA1 (ENSPTIG00000012542) #14	CLCA2 (ENSPTIG00000012779) #15	ODF2L (ENSPTIG00000013135) #16	COL24A1 (ENSPTIG00000013808) #17	ZNHIT6 (ENSPTIG00000014171) #18	CCN1 (ENSPTIG00000014498) #19	ENSPTIG00000010331	DDAH1 (ENSPTIG00000014695) #20	BCL10 (ENSPTIG00000015138) #21	C1orf52 (ENSPTIG00000015690) #22	SYDE2 (ENSPTIG00000015910) #23	DNAI3 (ENSPTIG00000016214) #24	MCOLN3 (ENSPTIG00000016693)	MCOLN2 (ENSPTIG00000017601)	LPAR3 (ENSPTIG00000017836)	SSX2IP (ENSPTIG00000017936)	CTBS (ENSPTIG00000018263)	SPATA1 (ENSPTIG00000019012)	GNG5 (ENSPTIG00000019098)	RPF1 (ENSPTIG00000019164)	DNASE2B (ENSPTIG00000019401)	ENSPTIG00000019546	SAMD13 (ENSPTIG00000019707)	ENSPTIG00000019784	PRKACB (ENSPTIG00000020230)
Cat	MODERN SPECIES	239	LMO4 (ENSFCAG00000044371) #8	HS2ST1 (ENSFCAG00000008006) #9	SELENOF (ENSFCAG00000005249) #10	SH3GLB1 (ENSFCAG00000028517) #11	ENSFCAG00000028907	ENSFCAG00000030426	CLCA4 (ENSFCAG00000018343) #13	CLCA1 (ENSFCAG00000031867) #14	CLCA2 (ENSFCAG00000008210) #15	ODF2L (ENSFCAG00000019281) #16	COL24A1 (ENSFCAG00000033986) #17	ZNHIT6 (ENSFCAG00000027469) #18	CCN1 (ENSFCAG00000031965) #19	DDAH1 (ENSFCAG00000029407) #20	BCL10 (ENSFCAG00000036364) #21	CC1H1orf52 (ENSFCAG00000035401) #22	SYDE2 (ENSFCAG00000027468) #23	DNAI3 (ENSFCAG00000011197) #24	MCOLN3 (ENSFCAG00000011196)	MCOLN2 (ENSFCAG00000011193)	LPAR3 (ENSFCAG00000008799)	SSX2IP (ENSFCAG00000023838)	CTBS (ENSFCAG00000046319)	SPATA1 (ENSFCAG00000022598)	GNG5 (ENSFCAG00000038836)	RPF1 (ENSFCAG00000025546)	DNASE2B (ENSFCAG00000008789)	UOX (ENSFCAG00000024210)	ENSFCAG00000050042	SAMD13 (ENSFCAG00000045569)	ENSFCAG00000049478
Caniformia	ANCESTRAL SPECIES	2	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Canidae	ANCESTRAL SPECIES	18	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00950000183199.a.b.p	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804.a	ENSGT00530000063936.b	ENSGT00940000163788
Canis_lupus	ANCESTRAL SPECIES	2	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00950000183199.a.b.p	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804.a	ENSGT00530000063936.b	ENSGT00940000163788
Dog	MODERN SPECIES	34	CLCA4 (ENSCAFG00845020831) #13	CLCA1 (ENSCAFG00845020906) #14	CLCA2 (ENSCAFG00845021008) #15	ODF2L (ENSCAFG00845021153) #16	ENSCAFG00845021655	ENSCAFG00845021690	COL24A1 (ENSCAFG00845022035) #17	ENSCAFG00845024397	ENSCAFG00845024424	ZNHIT6 (ENSCAFG00845024485) #18	CCN1 (ENSCAFG00845024708) #19	ENSCAFG00845024791	ENSCAFG00845001033	DDAH1 (ENSCAFG00845001064) #20	BCL10 (ENSCAFG00845001105) #21	C6H1orf52 (ENSCAFG00845001130) #22	SYDE2 (ENSCAFG00845001161) #23	WDR63 (ENSCAFG00845001218) #24	MCOLN3 (ENSCAFG00845001310)	MCOLN2 (ENSCAFG00845001382)	LPAR3 (ENSCAFG00845001428)	ENSCAFG00845001445	SSX2IP (ENSCAFG00845001479)	ENSCAFG00845001531	GNG5 (ENSCAFG00845001608)	RPF1 (ENSCAFG00845001641)	UOX (ENSCAFG00845001685)	DNASE2B (ENSCAFG00845001747)	ENSCAFG00845001765	ENSCAFG00845001788	PRKACB (ENSCAFG00845001925)
Dingo	MODERN SPECIES	172	ENSCAFG00020013754	SH3GLB1 (ENSCAFG00020013756) #11	ENSCAFG00020013760	CLCA4 (ENSCAFG00020013813) #13	CLCA1 (ENSCAFG00020013898) #14	CLCA2 (ENSCAFG00020013957) #15	ODF2L (ENSCAFG00020013982) #16	ENSCAFG00020014075	ENSCAFG00020014085	ENSCAFG00020014087 #17	ZNHIT6 (ENSCAFG00020014100) #18	CCN1 (ENSCAFG00020014107) #19	ENSCAFG00020014109	DDAH1 (ENSCAFG00020014115) #20	BCL10 (ENSCAFG00020014121) #21	C1orf52 (ENSCAFG00020014126) #22	SYDE2 (ENSCAFG00020014128) #23	DNAI3 (ENSCAFG00020014165) #24	MCOLN3 (ENSCAFG00020014182)	MCOLN2 (ENSCAFG00020014195)	LPAR3 (ENSCAFG00020014218)	ENSCAFG00020014228	SSX2IP (ENSCAFG00020014235)	CTBS (ENSCAFG00020014264)	SPATA1 (ENSCAFG00020014283)	GNG5 (ENSCAFG00020014293)	ENSCAFG00020014296	DNASE2B (ENSCAFG00020014302)	ENSCAFG00020014308	ENSCAFG00020014317	SAMD13 (ENSCAFG00020014319)
Red fox	MODERN SPECIES	50	SELENOF (ENSVVUG00000030159) #10	SH3GLB1 (ENSVVUG00000030155) #11	ENSVVUG00000030152	CLCA4 (ENSVVUG00000030149) #13	CLCA1 (ENSVVUG00000030143) #14	CLCA2 (ENSVVUG00000030122) #15	ODF2L (ENSVVUG00000030120) #16	ENSVVUG00000030118	ENSVVUG00000030110	ENSVVUG00000030103 #17	ZNHIT6 (ENSVVUG00000030102) #18	CYR61 (ENSVVUG00000030100) #19	ENSVVUG00000030098	DDAH1 (ENSVVUG00000030097) #20	BCL10 (ENSVVUG00000030096) #21	C1orf52 (ENSVVUG00000030094) #22	SYDE2 (ENSVVUG00000030093) #23	WDR63 (ENSVVUG00000030090) #24	MCOLN3 (ENSVVUG00000030089)	MCOLN2 (ENSVVUG00000030088)	LPAR3 (ENSVVUG00000030085)	SSX2IP (ENSVVUG00000030083)	CTBS (ENSVVUG00000030082)	SPATA1 (ENSVVUG00000030078)	ENSVVUG00000030076	DNASE2B (ENSVVUG00000030073)	ENSVVUG00000030072	ENSVVUG00000030071	SAMD13 (ENSVVUG00000030070)	ENSVVUG00000030069	PRKACB (ENSVVUG00000030067)
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00390000009268.y.a	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Ursidae	ANCESTRAL SPECIES	32	ENSGT00390000009268.y.a	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b.i #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.d
Ursus	ANCESTRAL SPECIES	139	ENSGT00940000157730 #8	ENSGT00390000009268.y.a	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b.i #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.d
American black bear	MODERN SPECIES	1481														DDAH1 (ENSUAMG00000019285) #20	BCL10 (ENSUAMG00000019286) #21	C1orf52 (ENSUAMG00000019287) #22	SYDE2 (ENSUAMG00000019288) #23
Polar bear	MODERN SPECIES	170	LMO4 (ENSUMAG00000001651) #8	ENSUMAG00000001654	HS2ST1 (ENSUMAG00000001671) #9	SELENOF (ENSUMAG00000001679) #10	SH3GLB1 (ENSUMAG00000001715) #11	ENSUMAG00000001751	CLCA4 (ENSUMAG00000001934) #13	CLCA1 (ENSUMAG00000002319) #14	CLCA2 (ENSUMAG00000002415) #15	ODF2L (ENSUMAG00000002451) #16	ENSUMAG00000002474 #17	ZNHIT6 (ENSUMAG00000002478) #18	CCN1 (ENSUMAG00000002488) #19	DDAH1 (ENSUMAG00000002499) #20	BCL10 (ENSUMAG00000002502) #21	C1orf52 (ENSUMAG00000002504) #22	SYDE2 (ENSUMAG00000002509) #23	DNAI3 (ENSUMAG00000002541) #24	MCOLN3 (ENSUMAG00000002560)	MCOLN2 (ENSUMAG00000002572)	LPAR3 (ENSUMAG00000002579)	SSX2IP (ENSUMAG00000002601)	CTBS (ENSUMAG00000002608)	SPATA1 (ENSUMAG00000002623)	ENSUMAG00000002631	RPF1 (ENSUMAG00000002636)	DNASE2B (ENSUMAG00000002646)	ENSUMAG00000002660	SAMD13 (ENSUMAG00000002672)	ENSUMAG00000002678	ENSUMAG00000002683
Giant Panda	MODERN SPECIES	11	ENSAMEG00000020192	HS2ST1 (ENSAMEG00000016204) #9	SELENOF (ENSAMEG00000027639) #10	SH3GLB1 (ENSAMEG00000016222) #11	ENSAMEG00000015592	CLCA4 (ENSAMEG00000017158) #13	CLCA1 (ENSAMEG00000017170) #14	CLCA2 (ENSAMEG00000017197) #15	ODF2L (ENSAMEG00000017198) #16	COL24A1 (ENSAMEG00000017218) #17	ZNHIT6 (ENSAMEG00000017224) #18	CCN1 (ENSAMEG00000017235) #19	ENSAMEG00000023476	DDAH1 (ENSAMEG00000017246) #20	BCL10 (ENSAMEG00000026623) #21	C1orf52 (ENSAMEG00000023530) #22	SYDE2 (ENSAMEG00000017261) #23	DNAI3 (ENSAMEG00000017265) #24	MCOLN3 (ENSAMEG00000017280)	MCOLN2 (ENSAMEG00000017295)	SSX2IP (ENSAMEG00000006467)	CTBS (ENSAMEG00000000372)	SPATA1 (ENSAMEG00000000388)	ENSAMEG00000029878	RPF1 (ENSAMEG00000008531)	DNASE2B (ENSAMEG00000013581)	ENSAMEG00000013543	ENSAMEG00000031257	SAMD13 (ENSAMEG00000026469)	PRKACB (ENSAMEG00000013506)	TTLL7 (ENSAMEG00000014783)
Mustelinae	ANCESTRAL SPECIES	60	ENSGT00390000009268.y.a	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00940000163788	ENSGT00530000063936.b
Ferret	MODERN SPECIES	197	GTF2B (ENSMPUG00000004799)	PKN2 (ENSMPUG00000004804) #7	ENSMPUG00000004816	LMO4 (ENSMPUG00000004821) #8	HS2ST1 (ENSMPUG00000004829) #9	SH3GLB1 (ENSMPUG00000004832) #11	ENSMPUG00000004938	CLCA4 (ENSMPUG00000005112) #13	CLCA1 (ENSMPUG00000005181) #14	ODF2L (ENSMPUG00000005220) #16	COL24A1 (ENSMPUG00000005229) #17	ZNHIT6 (ENSMPUG00000005352) #18	CCN1 (ENSMPUG00000005430) #19	DDAH1 (ENSMPUG00000005441) #20	BCL10 (ENSMPUG00000005447) #21	ENSMPUG00000005524 #22	SYDE2 (ENSMPUG00000005531) #23	DNAI3 (ENSMPUG00000005544) #24	MCOLN3 (ENSMPUG00000005571)	LPAR3 (ENSMPUG00000005683)	SSX2IP (ENSMPUG00000005687)	CTBS (ENSMPUG00000005696)	SPATA1 (ENSMPUG00000005701)	ENSMPUG00000005730	ENSMPUG00000005736	DNASE2B (ENSMPUG00000005741)	ENSMPUG00000005748	ENSMPUG00000005757	SAMD13 (ENSMPUG00000005761)	PRKACB (ENSMPUG00000005765)	TTLL7 (ENSMPUG00000005774)
American mink	MODERN SPECIES	141	ENSNVIG00000010303	HS2ST (ENSNVIG00000010265) #9	SELENOF (ENSNVIG00000010248) #10	SH3GLB1 (ENSNVIG00000010176) #11	ENSNVIG00000010085	CLCA4 (ENSNVIG00000010023) #13	CLCA1 (ENSNVIG00000009950) #14	CLCA2 (ENSNVIG00000009915) #15	ODF2L (ENSNVIG00000009848) #16	COL24A1 (ENSNVIG00000009756) #17	ZNHIT6 (ENSNVIG00000009678) #18	CCN1 (ENSNVIG00000009667) #19	ENSNVIG00000009665	DDAH1 (ENSNVIG00000009631) #20	BCL10 (ENSNVIG00000009612) #21	C1orf52 (ENSNVIG00000009606) #22	SYDE2 (ENSNVIG00000009581) #23	DNAI3 (ENSNVIG00000009565) #24	MCOLN3 (ENSNVIG00000009481)	MCOLN2 (ENSNVIG00000009411)	LPAR3 (ENSNVIG00000009396)	SSX2IP (ENSNVIG00000009366)	CTBS (ENSNVIG00000009351)	SPATA1 (ENSNVIG00000009323)	ENSNVIG00000009308	RPF1 (ENSNVIG00000009290)	DNASE2B (ENSNVIG00000009276)	ENSNVIG00000009249	ENSNVIG00000009242	ENSNVIG00000009235	SAMD13 (ENSNVIG00000009219)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000017398 #22
Hedgehog	DUPLICATION
Hedgehog	MODERN SPECIES	9072																ENSEEUG00000003599 #22
Hedgehog	MODERN SPECIES	10725																ENSEEUG00000013639 #22
Common shrew	MODERN SPECIES	4242																ENSSARG00000000256 #22
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00500000046198	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Glires	ANCESTRAL SPECIES		ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Lagomorpha	ANCESTRAL SPECIES	73	ENSGT00940000155827	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00960000193082	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b
Rabbit	MODERN SPECIES	4	ENSOCUG00000030334	ENSOCUG00000025724	ENSOCUG00000015437 #13	ENSOCUG00000033661	CLCA1 (ENSOCUG00000004736) #14	CLCA2 (ENSOCUG00000004727) #15	ODF2L (ENSOCUG00000001834) #16	ENSOCUG00000036832	COL24A1 (ENSOCUG00000003917) #17	ZNHIT6 (ENSOCUG00000003910) #18	CCN1 (ENSOCUG00000003905) #19	ENSOCUG00000026503	DDAH1 (ENSOCUG00000005249) #20	BCL10 (ENSOCUG00000016199) #21	ENSOCUG00000035286	C1orf52 (ENSOCUG00000002803) #22	SYDE2 (ENSOCUG00000022246) #23	DNAI3 (ENSOCUG00000010160) #24	MCOLN3 (ENSOCUG00000009332)	MCOLN2 (ENSOCUG00000009322)	ENSOCUG00000027616	LPAR3 (ENSOCUG00000024789)	SSX2IP (ENSOCUG00000015685)	ENSOCUG00000032268	CTBS (ENSOCUG00000003059)	SPATA1 (ENSOCUG00000006613)	GNG5 (ENSOCUG00000036571)	ENSOCUG00000014803	ENSOCUG00000027397	ENSOCUG00000029744	ENSOCUG00000023908
Pika	MODERN SPECIES	2693												ENSOPRG00000011386 #18	CCN1 (ENSOPRG00000011377) #19	DDAH1 (ENSOPRG00000011345) #20	BCL10 (ENSOPRG00000011338) #21	C1orf52 (ENSOPRG00000011332) #22
Rodentia	ANCESTRAL SPECIES		ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Myomorpha	ANCESTRAL SPECIES	12	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Muroidea	ANCESTRAL SPECIES	6	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.g.a	ENSGT00940000157555.h	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Muroidea_A	ANCESTRAL SPECIES	5	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.h	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Cricetidae	ANCESTRAL SPECIES	6	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.g.a	ENSGT00940000157555.g.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892.j #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b.uc	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169
Cricetidae_B	ANCESTRAL SPECIES	3	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.g.a	ENSGT00940000157555.g.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892.j #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b.uc	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00900000143848
Prairie vole	MODERN SPECIES	8	Selenof (ENSMOCG00000002490) #10	Sh3glb1 (ENSMOCG00000013092) #11	ENSMOCG00000000717	ENSMOCG00000005395	ENSMOCG00000016514 #13	ENSMOCG00000009777	Clca1 (ENSMOCG00000015412) #14	Clca2 (ENSMOCG00000021161) #15	Odf2l (ENSMOCG00000013411) #16	Col24a1 (ENSMOCG00000010555)	Znhit6 (ENSMOCG00000011010) #18	Ccn1 (ENSMOCG00000013502) #19	ENSMOCG00000009612	Ddah1 (ENSMOCG00000018589) #20	Bcl10 (ENSMOCG00000004469) #21	2410004B18Rik (ENSMOCG00000000971) #22	Syde2 (ENSMOCG00000011613) #23	Dnai3 (ENSMOCG00000004827) #24	Mcoln3 (ENSMOCG00000011948)	Mcoln2 (ENSMOCG00000005258)	Lpar3 (ENSMOCG00000012201)	Ssx2ip (ENSMOCG00000014448)	Ctbs (ENSMOCG00000020087)	ENSMOCG00000022893	ENSMOCG00000000334	ENSMOCG00000005222	Rpf1 (ENSMOCG00000018274)	Dnase2b (ENSMOCG00000000354)	Uox (ENSMOCG00000016256)	Samd13 (ENSMOCG00000010216)	Prkacb (ENSMOCG00000001336)
Northern American deer mouse	MODERN SPECIES	19	Selenof (ENSPEMG00000020473) #10	Sh3glb1 (ENSPEMG00000030955) #11	ENSPEMG00000022101	ENSPEMG00000022445	ENSPEMG00000021736	ENSPEMG00000007919 #13	Clca1 (ENSPEMG00000023001) #14	Clca2 (ENSPEMG00000021862) #15	Odf2l (ENSPEMG00000022035) #16	Col24a1 (ENSPEMG00000010634)	Znhit6 (ENSPEMG00000022716) #18	Ccn1 (ENSPEMG00000000386) #19	ENSPEMG00000031409	Ddah1 (ENSPEMG00000027558) #20	Bcl10 (ENSPEMG00000026389) #21	ENSPEMG00000028265 #22	Syde2 (ENSPEMG00000022180) #23	Dnai3 (ENSPEMG00000023437) #24	Mcoln3 (ENSPEMG00000014566)	Mcoln2 (ENSPEMG00000015343)	Lpar3 (ENSPEMG00000022406)	Ssx2ip (ENSPEMG00000023032)	Ctbs (ENSPEMG00000006184)	Spata1 (ENSPEMG00000023282)	Rpf1 (ENSPEMG00000023196)	Dnase2b (ENSPEMG00000023363)	Uox (ENSPEMG00000023036)	ENSPEMG00000028095	4930503B20Rik (ENSPEMG00000023951)	Prkacb (ENSPEMG00000030921)	ENSPEMG00000024491
Cricetinae	ANCESTRAL SPECIES	12	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.g.a	ENSGT00940000157555.g.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892.j #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b.uc	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169
Golden Hamster	MODERN SPECIES	735	Hs2st1 (ENSMAUG00000009309) #9	Selenof (ENSMAUG00000002011) #10	ENSMAUG00000008381 #11	ENSMAUG00000018947	ENSMAUG00000017339	ENSMAUG00000014124 #13	Clca1 (ENSMAUG00000020334) #14	Clca2 (ENSMAUG00000020634) #15	Odf2l (ENSMAUG00000001252) #16	Col24a1 (ENSMAUG00000010161)	ENSMAUG00000020898 #18	Ccn1 (ENSMAUG00000006075) #19	ENSMAUG00000017168	Ddah1 (ENSMAUG00000012623) #20	ENSMAUG00000011334 #21	2410004B18Rik (ENSMAUG00000019352) #22	Syde2 (ENSMAUG00000017505) #23	Dnai3 (ENSMAUG00000005774) #24	Mcoln3 (ENSMAUG00000018992)	Mcoln2 (ENSMAUG00000006761)	Ssx2ip (ENSMAUG00000013155)	ENSMAUG00000008498	Spata1 (ENSMAUG00000008313)	ENSMAUG00000019525	Rpf1 (ENSMAUG00000006030)	Dnase2b (ENSMAUG00000019185)	Uox (ENSMAUG00000014563)	ENSMAUG00000019018	Prkacb (ENSMAUG00000002887)	ENSMAUG00000011447
Chinese hamster chok1gshd	MODERN SPECIES	219	Hs2st1 (ENSCGRG00001010979) #9	Selenof (ENSCGRG00001004806) #10	Sh3glb1 (ENSCGRG00001002284) #11	ENSCGRG00001022589	ENSCGRG00001018022	ENSCGRG00001017040 #13	Clca1 (ENSCGRG00001016411) #14	Clca2 (ENSCGRG00001014297) #15	Odf2l (ENSCGRG00001012670) #16	Col24a1 (ENSCGRG00001021909)	Znhit6 (ENSCGRG00001018263) #18	Ccn1 (ENSCGRG00001017662) #19	ENSCGRG00001016514	Ddah1 (ENSCGRG00001019335) #20	Bcl10 (ENSCGRG00001018169) #21	2410004B18Rik (ENSCGRG00001015888) #22	Syde2 (ENSCGRG00001014086) #23	ENSCGRG00001011030 #24	Mcoln3 (ENSCGRG00001004877)	Mcoln2 (ENSCGRG00001001707)	Lpar3 (ENSCGRG00001024413)	Ssx2ip (ENSCGRG00001019268)	Ctbs (ENSCGRG00001014407)	Spata1 (ENSCGRG00001008771)	ENSCGRG00001011533	Rpf1 (ENSCGRG00001001189)	Dnase2b (ENSCGRG00001000256)	Uox (ENSCGRG00001021254)	4930503B20Rik (ENSCGRG00001018506)	Samd13 (ENSCGRG00001015430)	PRKACB (ENSCGRG00001022775)
Murinae	ANCESTRAL SPECIES	5	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.h.a	ENSGT00940000157555.h.b	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Mus	ANCESTRAL SPECIES	7	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.h.a	ENSGT00940000157555.h.b	ENSGT00940000160416.m #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Mus_A	ANCESTRAL SPECIES	9	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.h.a	ENSGT00940000157555.h.b	ENSGT00940000160416.m #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Mus_B	ANCESTRAL SPECIES	8	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.h.a.a	ENSGT00940000157555.h.b	ENSGT00940000160416.n #13	ENSGT00940000160416.m #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.a	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Mouse	MODERN SPECIES	12	Selenof (ENSMUSG00000037072) #10	Sh3glb1 (ENSMUSG00000037062) #11	Clca3a1 (ENSMUSG00000056025)	Clca3a2 (ENSMUSG00000028262)	Clca3b (ENSMUSG00000037033)	Clca4b (ENSMUSG00000074195) #13	Clca4a (ENSMUSG00000068547) #13	Clca1 (ENSMUSG00000028255) #14	Clca2 (ENSMUSG00000036960) #15	Odf2l (ENSMUSG00000028256) #16	Col24a1 (ENSMUSG00000028197)	Znhit6 (ENSMUSG00000074182) #18	Ccn1 (ENSMUSG00000028195) #19	Ddah1 (ENSMUSG00000028194) #20	Bcl10 (ENSMUSG00000028191) #21	2410004B18Rik (ENSMUSG00000036873) #22	Syde2 (ENSMUSG00000036863) #23	Dnai3 (ENSMUSG00000043020) #24	Mcoln3 (ENSMUSG00000036853)	Mcoln2 (ENSMUSG00000011008)	Lpar3 (ENSMUSG00000036832)	Ssx2ip (ENSMUSG00000036825)	Ctbs (ENSMUSG00000028189)	Spata1 (ENSMUSG00000028188)	Gng5 (ENSMUSG00000068523)	Rpf1 (ENSMUSG00000028187)	Uox (ENSMUSG00000028186)	Dnase2b (ENSMUSG00000028185)	4930503B20Rik (ENSMUSG00000090202)	Samd13 (ENSMUSG00000048652)	Prkacb (ENSMUSG00000005034)
Mus_C	ANCESTRAL SPECIES	6	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555.h.a.a	ENSGT00940000157555.h.b	ENSGT00940000160416.m #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000163583	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Steppe mouse	MODERN SPECIES	3408										ENSMSIG00000006728	Znhit6 (ENSMSIG00000006758) #18	Ccn1 (ENSMSIG00000006855) #19	ENSMSIG00000006885	Ddah1 (ENSMSIG00000006895) #20	Bcl10 (ENSMSIG00000006967) #21	2410004B18Rik (ENSMSIG00000006989) #22	Syde2 (ENSMSIG00000006994) #23	Dnai3 (ENSMSIG00000007023) #24	Mcoln3 (ENSMSIG00000007086)	Mcoln2 (ENSMSIG00000007140)	Lpar3 (ENSMSIG00000007212)	ENSMSIG00000007226	Ssx2ip (ENSMSIG00000007247)	Ctbs (ENSMSIG00000007413)	Spata1 (ENSMSIG00000007443)	ENSMSIG00000007613	Rpf1 (ENSMSIG00000007632)	Dnase2b (ENSMSIG00000007688)	ENSMSIG00000007717	4930503B20Rik (ENSMSIG00000007775)	Prkacb (ENSMSIG00000007822)
spretus	MODERN SPECIES	12	Pkn2 (MGP_SPRETEiJ_G0026654) #7	Lmo4 (MGP_SPRETEiJ_G0026655) #8	Hs2st1 (MGP_SPRETEiJ_G0026656) #9	MGP_SPRETEiJ_G0026657	Sh3glb1 (MGP_SPRETEiJ_G0026658) #11	MGP_SPRETEiJ_G0026659	Clca3b (MGP_SPRETEiJ_G0026660)	Clca1 (MGP_SPRETEiJ_G0026661) #14	Clca2 (MGP_SPRETEiJ_G0026662) #15	Odf2l (MGP_SPRETEiJ_G0026663) #16	Col24a1 (MGP_SPRETEiJ_G0026664)	Znhit6 (MGP_SPRETEiJ_G0026665) #18	Ccn1 (MGP_SPRETEiJ_G0026666) #19	Ddah1 (MGP_SPRETEiJ_G0026667) #20	MGP_SPRETEiJ_G0026668 #21	2410004B18Rik (MGP_SPRETEiJ_G0026669) #22	Syde2 (MGP_SPRETEiJ_G0026670) #23	Dnai3 (MGP_SPRETEiJ_G0026671) #24	MGP_SPRETEiJ_G0026672	Mcoln2 (MGP_SPRETEiJ_G0026673)	Lpar3 (MGP_SPRETEiJ_G0026674)	Ssx2ip (MGP_SPRETEiJ_G0026675)	Ctbs (MGP_SPRETEiJ_G0026676)	Spata1 (MGP_SPRETEiJ_G0026677)	MGP_SPRETEiJ_G0026678	Rpf1 (MGP_SPRETEiJ_G0026679)	Uox (MGP_SPRETEiJ_G0026680)	Dnase2b (MGP_SPRETEiJ_G0026681)	4930503B20Rik (MGP_SPRETEiJ_G0026682)	Samd13 (MGP_SPRETEiJ_G0026683)	Prkacb (MGP_SPRETEiJ_G0026684)
Ryukyu mouse	MODERN SPECIES	12	Hs2st1 (MGP_CAROLIEiJ_G0025701) #9	MGP_CAROLIEiJ_G0025702	Sh3glb1 (MGP_CAROLIEiJ_G0025703) #11	MGP_CAROLIEiJ_G0025704	MGP_CAROLIEiJ_G0025705	Clca3b (MGP_CAROLIEiJ_G0025706)	MGP_CAROLIEiJ_G0025707 #13	MGP_CAROLIEiJ_G0025708 #13	Clca1 (MGP_CAROLIEiJ_G0025709) #14	Clca2 (MGP_CAROLIEiJ_G0025710) #15	Odf2l (MGP_CAROLIEiJ_G0025711) #16	Col24a1 (MGP_CAROLIEiJ_G0025712)	Znhit6 (MGP_CAROLIEiJ_G0025713) #18	Ccn1 (MGP_CAROLIEiJ_G0025714) #19	Ddah1 (MGP_CAROLIEiJ_G0025715) #20	2410004B18Rik (MGP_CAROLIEiJ_G0025716) #22	Syde2 (MGP_CAROLIEiJ_G0025717) #23	Dnai3 (MGP_CAROLIEiJ_G0025718) #24	Mcoln3 (MGP_CAROLIEiJ_G0025719)	Mcoln2 (MGP_CAROLIEiJ_G0025720)	Lpar3 (MGP_CAROLIEiJ_G0025721)	Ssx2ip (MGP_CAROLIEiJ_G0025722)	Ctbs (MGP_CAROLIEiJ_G0025723)	Spata1 (MGP_CAROLIEiJ_G0025724)	MGP_CAROLIEiJ_G0025725	Rpf1 (MGP_CAROLIEiJ_G0025726)	Uox (MGP_CAROLIEiJ_G0025727)	Dnase2b (MGP_CAROLIEiJ_G0025728)	4930503B20Rik (MGP_CAROLIEiJ_G0025729)	Samd13 (MGP_CAROLIEiJ_G0025730)	Prkacb (MGP_CAROLIEiJ_G0025731)
Shrew mouse	MODERN SPECIES	17	MGP_PahariEiJ_G0027152	Sh3glb1 (MGP_PahariEiJ_G0027153) #11	MGP_PahariEiJ_G0027154	MGP_PahariEiJ_G0027155	Clca3b (MGP_PahariEiJ_G0027156)	MGP_PahariEiJ_G0027157 #13	MGP_PahariEiJ_G0027158 #13	Clca1 (MGP_PahariEiJ_G0027159) #14	Clca2 (MGP_PahariEiJ_G0027160) #15	Odf2l (MGP_PahariEiJ_G0027161) #16	Col24a1 (MGP_PahariEiJ_G0027162)	Znhit6 (MGP_PahariEiJ_G0027163) #18	Ccn1 (MGP_PahariEiJ_G0027164) #19	Ddah1 (MGP_PahariEiJ_G0027165) #20	Bcl10 (MGP_PahariEiJ_G0027166) #21	2410004B18Rik (MGP_PahariEiJ_G0027167) #22	Syde2 (MGP_PahariEiJ_G0027168) #23	Dnai3 (MGP_PahariEiJ_G0027169) #24	Mcoln3 (MGP_PahariEiJ_G0027170)	Mcoln2 (MGP_PahariEiJ_G0027171)	Lpar3 (MGP_PahariEiJ_G0027172)	Ssx2ip (MGP_PahariEiJ_G0027173)	Ctbs (MGP_PahariEiJ_G0027174)	Spata1 (MGP_PahariEiJ_G0027175)	MGP_PahariEiJ_G0027176	MGP_PahariEiJ_G0027177	Uox (MGP_PahariEiJ_G0027178)	Dnase2b (MGP_PahariEiJ_G0027179)	4930503B20Rik (MGP_PahariEiJ_G0027180)	Samd13 (MGP_PahariEiJ_G0027181)	Prkacb (MGP_PahariEiJ_G0027182)
Rat	MODERN SPECIES	11	Lmo4 (ENSRNOG00000009205) #8	Hs2st1 (ENSRNOG00000012549) #9	Selenof (ENSRNOG00000055257) #10	Sh3glb1 (ENSRNOG00000012957) #11	Clca5 (ENSRNOG00000013334)	Clca4l (ENSRNOG00000036877)	Clca4 (ENSRNOG00000029889) #13	Clca1 (ENSRNOG00000060831) #14	Clca2 (ENSRNOG00000013771) #15	Odf2l (ENSRNOG00000014059) #16	Col24a1 (ENSRNOG00000014143)	Znhit6 (ENSRNOG00000030049) #18	Ccn1 (ENSRNOG00000014350) #19	Ddah1 (ENSRNOG00000014613) #20	Bcl10 (ENSRNOG00000042389) #21	C2h1orf52 (ENSRNOG00000014857) #22	Syde2 (ENSRNOG00000026186) #23	Dnai3 (ENSRNOG00000014893) #24	Mcoln3 (ENSRNOG00000015024)	Mcoln2 (ENSRNOG00000015089)	Lpar3 (ENSRNOG00000064204)	Ssx2ip (ENSRNOG00000015425)	Ctbs (ENSRNOG00000015573)	Spata1 (ENSRNOG00000015678)	ENSRNOG00000068715	Rpf1 (ENSRNOG00000015969)	Uox (ENSRNOG00000016339)	Dnase2b (ENSRNOG00000016262)	Samd13 (ENSRNOG00000016432)	Prkacb (ENSRNOG00000004978)	Ttll7 (ENSRNOG00000031997)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1893	ENSNGAG00000017891	ENSNGAG00000011552	Sh3glb1 (ENSNGAG00000008323) #11	ENSNGAG00000022151	ENSNGAG00000020840	ENSNGAG00000021773 #13	Clca1 (ENSNGAG00000020353) #14	Clca2 (ENSNGAG00000017320) #15	Odf2l (ENSNGAG00000018510) #16	ENSNGAG00000015725 #17	Znhit6 (ENSNGAG00000007630) #18	Ccn1 (ENSNGAG00000001335) #19	ENSNGAG00000003738	Ddah1 (ENSNGAG00000018033) #20	Bcl10 (ENSNGAG00000015335) #21	2410004B18Rik (ENSNGAG00000014421) #22	Syde2 (ENSNGAG00000012962) #23	Dnai3 (ENSNGAG00000011144) #24	Mcoln3 (ENSNGAG00000018883)	Mcoln2 (ENSNGAG00000016270)	Lpar3 (ENSNGAG00000020209)	Ssx2ip (ENSNGAG00000001910)	Ctbs (ENSNGAG00000008828)	Spata1 (ENSNGAG00000019652)	ENSNGAG00000018264	Rpf1 (ENSNGAG00000018028)	Dnase2b (ENSNGAG00000011775)	Uox (ENSNGAG00000022385)	4930503B20Rik (ENSNGAG00000021614)	Samd13 (ENSNGAG00000013463)	Prkacb (ENSNGAG00000023069)
Lesser Egyptian jerboa	MODERN SPECIES	52	Lmo4 (ENSJJAG00000012847) #8	Hs2st1 (ENSJJAG00000000519) #9	ENSJJAG00000009914	Sh3glb1 (ENSJJAG00000018470) #11	ENSJJAG00000018844	ENSJJAG00000023348 #13	Clca1 (ENSJJAG00000008764) #14	Clca2 (ENSJJAG00000012700) #15	Odf2l (ENSJJAG00000007954) #16	ENSJJAG00000020958 #17	Znhit6 (ENSJJAG00000021153) #18	Ccn1 (ENSJJAG00000018163) #19	ENSJJAG00000012670	Ddah1 (ENSJJAG00000016256) #20	Bcl10 (ENSJJAG00000001473) #21	2410004B18Rik (ENSJJAG00000011597) #22	Syde2 (ENSJJAG00000018610) #23	Dnai3 (ENSJJAG00000023564) #24	Mcoln3 (ENSJJAG00000023078)	Mcoln2 (ENSJJAG00000014832)	Lpar3 (ENSJJAG00000021688)	Ssx2ip (ENSJJAG00000010467)	Ctbs (ENSJJAG00000018386)	ENSJJAG00000006619	ENSJJAG00000014898	ENSJJAG00000011539	Rpf1 (ENSJJAG00000018873)	Dnase2b (ENSJJAG00000009922)	Uox (ENSJJAG00000008960)	4930503B20Rik (ENSJJAG00000022696)	Samd13 (ENSJJAG00000021117)
Kangaroo rat	MODERN SPECIES	358	Prkab2 (ENSDORG00000027473)	ENSDORG00000024515	Sec22b (ENSDORG00000023311)	Notch2 (ENSDORG00000001171)	Reg4 (ENSDORG00000009271)	Hmgcs2 (ENSDORG00000008532)	Phgdh (ENSDORG00000008531)	Clca1 (ENSDORG00000008434) #14	Clca2 (ENSDORG00000009200) #15	Odf2l (ENSDORG00000009195) #16	ENSDORG00000015616 #17	Znhit6 (ENSDORG00000029755) #18	Ccn1 (ENSDORG00000005602) #19	Ddah1 (ENSDORG00000013259) #20	ENSDORG00000028780 #21	2410004B18Rik (ENSDORG00000012509) #22	Syde2 (ENSDORG00000005799) #23	Dnai3 (ENSDORG00000015030) #24	Mcoln3 (ENSDORG00000014635)	Mcoln2 (ENSDORG00000014631)	Lpar3 (ENSDORG00000014630)	Ssx2ip (ENSDORG00000015060)	Ctbs (ENSDORG00000015059)	ENSDORG00000029065	ENSDORG00000029873	ENSDORG00000024192	Rpf1 (ENSDORG00000000607)	Dnase2b (ENSDORG00000000604)	Uox (ENSDORG00000027583)	4930503B20Rik (ENSDORG00000029007)	Samd13 (ENSDORG00000026931)
Rodentia_A	ANCESTRAL SPECIES		ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416.p #13	ENSGT00940000160416.o #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416.p #13	ENSGT00940000160416.o #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00940000168548	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169
Marmotini	ANCESTRAL SPECIES		ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416.p #13	ENSGT00940000160416.o.a #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00940000168548	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000003718.d.kd.b	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169
Marmotini_b	DUPLICATION
Marmotini_b	ANCESTRAL SPECIES	166						ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000003718.d.kd.b	ENSGT00390000017398.i #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169
Arctic ground squirrel	MODERN SPECIES	330						CLCA1 (ENSUPAG00010012033) #14	CLCA2 (ENSUPAG00010011985) #15	ODF2L (ENSUPAG00010011819) #16	ENSUPAG00010011804 #17	ZNHIT6 (ENSUPAG00010011778) #18	CCN1 (ENSUPAG00010011774) #19	ENSUPAG00010011773	DDAH1 (ENSUPAG00010011761) #20	BCL10 (ENSUPAG00010011755) #21	ENSUPAG00010011746	ENSUPAG00010011740 #22	SYDE2 (ENSUPAG00010011732) #23	DNAI3 (ENSUPAG00010011711) #24	MCOLN3 (ENSUPAG00010011700)	MCOLN2 (ENSUPAG00010011678)	LPAR3 (ENSUPAG00010011664)	SSX2IP (ENSUPAG00010011627)	CTBS (ENSUPAG00010011611)	ENSUPAG00010011599	ENSUPAG00010011592	RPF1 (ENSUPAG00010011580)	DNASE2B (ENSUPAG00010011561)	ENSUPAG00010011547	ENSUPAG00010011541	SAMD13 (ENSUPAG00010011529)	PRKACB (ENSUPAG00010011454)
Squirrel	MODERN SPECIES	208										ENSSTOG00000031983 #17	ZNHIT6 (ENSSTOG00000024455) #18	CCN1 (ENSSTOG00000019882) #19	ENSSTOG00000031250	DDAH1 (ENSSTOG00000012594) #20	BCL10 (ENSSTOG00000027214) #21	C1orf52 (ENSSTOG00000010698) #22	SYDE2 (ENSSTOG00000012586) #23	DNAI3 (ENSSTOG00000012564) #24	MCOLN3 (ENSSTOG00000011310)	MCOLN2 (ENSSTOG00000011302)	LPAR3 (ENSSTOG00000005282)	SSX2IP (ENSSTOG00000008644)	CTBS (ENSSTOG00000015319)	ENSSTOG00000021329	ENSSTOG00000033029	GNG5 (ENSSTOG00000008641)	RPF1 (ENSSTOG00000008635)	DNASE2B (ENSSTOG00000023007)	ENSSTOG00000022835	SAMD13 (ENSSTOG00000003083)	PRKACB (ENSSTOG00000003074)
Marmotini_b	ANCESTRAL SPECIES																	ENSGT00390000017398.j #22
Arctic ground squirrel	MODERN SPECIES	173												PPEF1 (ENSUPAG00010013699)	RS1 (ENSUPAG00010013669)	CDKL5 (ENSUPAG00010013645)	SCML2 (ENSUPAG00010013630)	ENSUPAG00010013622 #22	RAI2 (ENSUPAG00010013618)	ENSUPAG00010013597	NHS (ENSUPAG00010013557)	REPS2 (ENSUPAG00010013493)	RBBP7 (ENSUPAG00010013404)	TXLNG (ENSUPAG00010013379)	SYAP1 (ENSUPAG00010013371)	ENSUPAG00010013364	S100G (ENSUPAG00010013357)	CTPS2 (ENSUPAG00010013304)	GRPR (ENSUPAG00010013272)	AP1S2 (ENSUPAG00010013242)	ZRSR2 (ENSUPAG00010013230)	ENSUPAG00010013220	CA5B (ENSUPAG00010013214)
Alpin marmot	MODERN SPECIES	96	ENSMMMG00000006883 #13	ENSMMMG00000007100 #13	ENSMMMG00000008525 #13	CLCA1 (ENSMMMG00000008544) #14	CLCA2 (ENSMMMG00000008561) #15	ODF2L (ENSMMMG00000008590) #16	ENSMMMG00000008742	ENSMMMG00000008750 #17	ENSMMMG00000008758	ZNHIT6 (ENSMMMG00000008767) #18	CCN1 (ENSMMMG00000008796) #19	ENSMMMG00000008810	DDAH1 (ENSMMMG00000008813) #20	ENSMMMG00000008820 #21	ENSMMMG00000008825	C1orf52 (ENSMMMG00000008832) #22	SYDE2 (ENSMMMG00000008839) #23	DNAI3 (ENSMMMG00000008854) #24	MCOLN3 (ENSMMMG00000008888)	MCOLN2 (ENSMMMG00000008910)	LPAR3 (ENSMMMG00000008955)	SSX2IP (ENSMMMG00000008964)	CTBS (ENSMMMG00000009025)	ENSMMMG00000009057	GNG5 (ENSMMMG00000009067)	RPF1 (ENSMMMG00000009079)	DNASE2B (ENSMMMG00000009098)	ENSMMMG00000009120	SAMD13 (ENSMMMG00000009129)	ENSMMMG00000009152	ENSMMMG00000009169
Eurasian red squirrel	MODERN SPECIES		CLCA2 (ENSSVLG00005001063) #15	ODF2L (ENSSVLG00005001026) #16	ENSSVLG00005000969	ENSSVLG00005000957	COL24A1 (ENSSVLG00005000916) #17	ENSSVLG00005000886	ZNHIT6 (ENSSVLG00005000846) #18	ENSSVLG00005000810	CCN1 (ENSSVLG00005000795) #19	ENSSVLG00005000783	ENSSVLG00005000769	DDAH1 (ENSSVLG00005000747) #20	ENSSVLG00005000713	ENSSVLG00005000702	BCL10 (ENSSVLG00005000684) #21	C1orf52 (ENSSVLG00005000674) #22	GABARAP (ENSSVLG00005000657)	SYDE2 (ENSSVLG00005000635) #23	DNAI3 (ENSSVLG00005000535) #24	MCOLN3 (ENSSVLG00005000388)	MCOLN2 (ENSSVLG00005000331)	LPAR3 (ENSSVLG00005000296)	SSX2IP (ENSSVLG00005000274)	CTBS (ENSSVLG00005000249)	SPATA1 (ENSSVLG00005000234)	ENSSVLG00005000219	RPF1 (ENSSVLG00005000206)	DNASE2B (ENSSVLG00005000189)	ENSSVLG00005000176	SAMD13 (ENSSVLG00005000161)	PRKACB (ENSSVLG00005023190)
Hystricomorpha	ANCESTRAL SPECIES	44	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416.p #13	ENSGT00940000160416.o #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Naked mole-rat female	MODERN SPECIES	10	ENSHGLG00000035709 #13	ENSHGLG00000012115 #13	ENSHGLG00000015121	ENSHGLG00000037078 #13	CLCA1 (ENSHGLG00000015470) #14	CLCA2 (ENSHGLG00000015413) #15	ENSHGLG00000010829 #16	COL24A1 (ENSHGLG00000004244) #17	ENSHGLG00000036484	ZNHIT6 (ENSHGLG00000007009) #18	CCN1 (ENSHGLG00000007980) #19	DDAH1 (ENSHGLG00000047230) #20	ENSHGLG00000033883	ENSHGLG00000041300	BCL10 (ENSHGLG00000004369) #21	C1orf52 (ENSHGLG00000004452) #22	ENSHGLG00000039413	SYDE2 (ENSHGLG00000005398) #23	ENSHGLG00000006816 #24	ENSHGLG00000047666	MCOLN3 (ENSHGLG00000009140)	ENSHGLG00000005122	LPAR3 (ENSHGLG00000033915)	ENSHGLG00000035667	SSX2IP (ENSHGLG00000007408)	CTBS (ENSHGLG00000008383)	SPATA1 (ENSHGLG00000005825)	GNG5 (ENSHGLG00000005854)	RPF1 (ENSHGLG00000048402)	ENSHGLG00000009023	DNASE2B (ENSHGLG00000048352)
Hystricomorpha_a	ANCESTRAL SPECIES	14	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416.o.f #13	ENSGT00940000160416.p #13	ENSGT00940000160416.o.e #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Hystricomorpha_b	ANCESTRAL SPECIES	6	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416.o.e #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000160313.k	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Degu	DUPLICATION
Degu	MODERN SPECIES	150	ENSODEG00000002911	SH3GLB1 (ENSODEG00000003003) #11	ENSODEG00000002661	ENSODEG00000002677	ENSODEG00000002712 #13	ENSODEG00000002790 #13	CLCA2 (ENSODEG00000002864) #15	ODF2L (ENSODEG00000002955) #16	ENSODEG00000003023	COL24A1 (ENSODEG00000003113) #17	ZNHIT6 (ENSODEG00000003486) #18	CCN1 (ENSODEG00000003521) #19	ENSODEG00000018975	DDAH1 (ENSODEG00000003545) #20	BCL10 (ENSODEG00000003555) #21	ENSODEG00000003582 #22	ENSODEG00000003641	SYDE2 (ENSODEG00000003681) #23	DNAI3 (ENSODEG00000003772) #24	MCOLN3 (ENSODEG00000004499)	MCOLN2 (ENSODEG00000004650)	LPAR3 (ENSODEG00000004676)	ENSODEG00000019111	SSX2IP (ENSODEG00000004753)	CTBS (ENSODEG00000005131)	ENSODEG00000005441	ENSODEG00000002981	ENSODEG00000003027	ENSODEG00000003070	ENSODEG00000003125	DNASE2B (ENSODEG00000003140)
Degu	MODERN SPECIES	46	ENSODEG00000020279	CD2AP (ENSODEG00000015575)	OPN5 (ENSODEG00000015357)	ENSODEG00000015033	ENSODEG00000014928	ANXA11 (ENSODEG00000014938)	ZCCHC24 (ENSODEG00000015281)	PPIF (ENSODEG00000015244)	ZMIZ1 (ENSODEG00000015504)	RPS24 (ENSODEG00000015382)	POLR3A (ENSODEG00000015146)	DLG5 (ENSODEG00000015060)	KCNMA1 (ENSODEG00000016449)	LRMDA (ENSODEG00000015494) ##32	ZNF503 (ENSODEG00000015000)	ENSODEG00000014826 #22	COMTD1 (ENSODEG00000015636)	VDAC2 (ENSODEG00000014433)	SAMD8 (ENSODEG00000015010)	DUSP13 (ENSODEG00000014816)	DUSP29 (ENSODEG00000014367)	ENSODEG00000014295	ENSODEG00000020272	ENSODEG00000015430	ENSODEG00000015093	VCL (ENSODEG00000015408)	PLAU (ENSODEG00000015271)	CAMK2G (ENSODEG00000015036)	NDST2 (ENSODEG00000016187)	ZSWIM8 (ENSODEG00000015594)	CHCHD1 (ENSODEG00000013911)
Long-tailed chinchilla	MODERN SPECIES	130	ENSCLAG00000009271	ENSCLAG00000009598	ENSCLAG00000010819 #13	ENSCLAG00000007523 #13	CLCA1 (ENSCLAG00000008032) #14	CLCA2 (ENSCLAG00000004004) #15	ODF2L (ENSCLAG00000004825) #16	ENSCLAG00000006341	COL24A1 (ENSCLAG00000009364) #17	ENSCLAG00000011135	ZNHIT6 (ENSCLAG00000011251) #18	CCN1 (ENSCLAG00000015005) #19	ENSCLAG00000017789	DDAH1 (ENSCLAG00000003885) #20	BCL10 (ENSCLAG00000003932) #21	C1orf52 (ENSCLAG00000003961) #22	SYDE2 (ENSCLAG00000004038) #23	DNAI3 (ENSCLAG00000004279) #24	MCOLN3 (ENSCLAG00000004543)	MCOLN2 (ENSCLAG00000004888)	LPAR3 (ENSCLAG00000005453)	SSX2IP (ENSCLAG00000012846)	CTBS (ENSCLAG00000013866)	ENSCLAG00000009170	ENSCLAG00000006867	RPF1 (ENSCLAG00000007607)	ENSCLAG00000003910	DNASE2B (ENSCLAG00000004420)	SAMD13 (ENSCLAG00000004824)	ENSCLAG00000005050	PRKACB (ENSCLAG00000005809)
Guinea pig	MODERN SPECIES	2	SELENOF (ENSCPOG00000037223) #10	SH3GLB1 (ENSCPOG00000015176) #11	ENSCPOG00000015253	ENSCPOG00000039214 #13	ENSCPOG00000001098 #13	ENSCPOG00000014950 #13	CLCA1 (ENSCPOG00000014947) #14	CLCA2 (ENSCPOG00000014944) #15	ODF2L (ENSCPOG00000004605) #16	COL24A1 (ENSCPOG00000001259) #17	ZNHIT6 (ENSCPOG00000001258) #18	CCN1 (ENSCPOG00000010120) #19	ENSCPOG00000034357	DDAH1 (ENSCPOG00000035239) #20	BCL10 (ENSCPOG00000033375) #21	C1orf52 (ENSCPOG00000011795) #22	SYDE2 (ENSCPOG00000001552) #23	DNAI3 (ENSCPOG00000001550) #24	MCOLN3 (ENSCPOG00000030466)	MCOLN2 (ENSCPOG00000006755)	LPAR3 (ENSCPOG00000035050)	SSX2IP (ENSCPOG00000012045)	CTBS (ENSCPOG00000009243)	ENSCPOG00000033072	ENSCPOG00000019991	ENSCPOG00000030942	RPF1 (ENSCPOG00000014316)	DNASE2B (ENSCPOG00000011531)	ENSCPOG00000024987	SAMD13 (ENSCPOG00000031933)	PRKACB (ENSCPOG00000036250)
Primates	ANCESTRAL SPECIES	4	ENSGT00500000046198	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.a	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000161169
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.a	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000161169
Mouse lemur	MODERN SPECIES	11	SELENOF (ENSMICG00000015940) #10	ENSMICG00000037323	SH3GLB1 (ENSMICG00000015928) #11	ENSMICG00000034178	CLCA4 (ENSMICG00000015889) #13	ENSMICG00000031237	CLCA1 (ENSMICG00000015876) #14	ODF2L (ENSMICG00000015848) #16	COL24A1 (ENSMICG00000015782) #17	ZNHIT6 (ENSMICG00000015775) #18	CCN1 (ENSMICG00000015764) #19	ENSMICG00000033242	DDAH1 (ENSMICG00000015756) #20	ENSMICG00000029851	BCL10 (ENSMICG00000046947) #21	C1orf52 (ENSMICG00000015748) #22	SYDE2 (ENSMICG00000036942) #23	DNAI3 (ENSMICG00000014988) #24	MCOLN3 (ENSMICG00000014973)	MCOLN2 (ENSMICG00000014951)	LPAR3 (ENSMICG00000034976)	SSX2IP (ENSMICG00000031693)	CTBS (ENSMICG00000047868)	SPATA1 (ENSMICG00000034514)	ENSMICG00000027648	ENSMICG00000003093	DNASE2B (ENSMICG00000037013)	ENSMICG00000037252	ENSMICG00000042739	SAMD13 (ENSMICG00000036198)	ENSMICG00000047801
Lemuriformes_a	ANCESTRAL SPECIES	39	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186747	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.a	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078
Greater bamboo lemur	MODERN SPECIES	537	SELENOF (ENSPSMG00000021549) #10	SH3GLB1 (ENSPSMG00000021643) #11	ENSPSMG00000021689	ENSPSMG00000021691	CLCA4 (ENSPSMG00000021703) #13	CLCA1 (ENSPSMG00000021724) #14	CLCA2 (ENSPSMG00000021729) #15	ODF2L (ENSPSMG00000021792) #16	COL24A1 (ENSPSMG00000021850) #17	ZNHIT6 (ENSPSMG00000021864) #18	ENSPSMG00000021872	CCN1 (ENSPSMG00000021878) #19	ENSPSMG00000021882	DDAH1 (ENSPSMG00000021897) #20	BCL10 (ENSPSMG00000021929) #21	C1orf52 (ENSPSMG00000021942) #22	SYDE2 (ENSPSMG00000021951) #23	DNAI3 (ENSPSMG00000021999) #24	MCOLN3 (ENSPSMG00000022026)	MCOLN2 (ENSPSMG00000022039)	LPAR3 (ENSPSMG00000022047)	SSX2IP (ENSPSMG00000022107)	CTBS (ENSPSMG00000022172)	SPATA1 (ENSPSMG00000022182)	ENSPSMG00000022188	RPF1 (ENSPSMG00000022204)	DNASE2B (ENSPSMG00000022211)	ENSPSMG00000022213	SAMD13 (ENSPSMG00000022221)	ENSPSMG00000022228	ENSPSMG00000022233
Coquerels sifaka	MODERN SPECIES	846	HS2ST1 (ENSPCOG00000023483) #9	SELENOF (ENSPCOG00000008918) #10	ENSPCOG00000022033	SH3GLB1 (ENSPCOG00000006000) #11	ENSPCOG00000013545	CLCA4 (ENSPCOG00000016905) #13	CLCA1 (ENSPCOG00000024996) #14	CLCA2 (ENSPCOG00000025009) #15	COL24A1 (ENSPCOG00000021719) #17	ENSPCOG00000026821	ZNHIT6 (ENSPCOG00000014824) #18	CCN1 (ENSPCOG00000020683) #19	ENSPCOG00000013303	DDAH1 (ENSPCOG00000028125) #20	BCL10 (ENSPCOG00000026735) #21	C1orf52 (ENSPCOG00000022149) #22	SYDE2 (ENSPCOG00000019185) #23	DNAI3 (ENSPCOG00000007531) #24	MCOLN3 (ENSPCOG00000021992)	MCOLN2 (ENSPCOG00000017147)	LPAR3 (ENSPCOG00000020815)	SSX2IP (ENSPCOG00000011853)	CTBS (ENSPCOG00000021717)	SPATA1 (ENSPCOG00000028221)	ENSPCOG00000019625	ENSPCOG00000022483	DNASE2B (ENSPCOG00000020958)	ENSPCOG00000014070	SAMD13 (ENSPCOG00000028743)	PRKACB (ENSPCOG00000014437)	TTLL7 (ENSPCOG00000017715)
Bushbaby	MODERN SPECIES	125	ENSOGAG00000030868	LMO4 (ENSOGAG00000002297) #8	HS2ST1 (ENSOGAG00000026296) #9	SH3GLB1 (ENSOGAG00000009494) #11	ENSOGAG00000014165	CLCA4 (ENSOGAG00000014158) #13	CLCA1 (ENSOGAG00000014152) #14	CLCA2 (ENSOGAG00000014147) #15	ODF2L (ENSOGAG00000014145) #16	COL24A1 (ENSOGAG00000010965) #17	ZNHIT6 (ENSOGAG00000010963) #18	CCN1 (ENSOGAG00000010959) #19	ENSOGAG00000033406	DDAH1 (ENSOGAG00000009978) #20	BCL10 (ENSOGAG00000009976) #21	C1orf52 (ENSOGAG00000008908) #22	SYDE2 (ENSOGAG00000008376) #23	DNAI3 (ENSOGAG00000007725) #24	MCOLN3 (ENSOGAG00000007722)	MCOLN2 (ENSOGAG00000007718)	LPAR3 (ENSOGAG00000016851)	SSX2IP (ENSOGAG00000004650)	CTBS (ENSOGAG00000004649)	SPATA1 (ENSOGAG00000004646)	GNG5 (ENSOGAG00000004645)	RPF1 (ENSOGAG00000004642)	DNASE2B (ENSOGAG00000005849)	ENSOGAG00000028035	SAMD13 (ENSOGAG00000005845)	PRKACB (ENSOGAG00000005838)	TTLL7 (ENSOGAG00000005832)
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00500000046198	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00910000147782	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000163788
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00940000164507	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00910000147782	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00530000063408.B #9	ENSGT00940000164507	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078
Hominidae	ANCESTRAL SPECIES	3	ENSGT00530000063408.B #9	ENSGT00940000164507	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00530000063408.B #9	ENSGT00940000164507	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b.f #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078
Gorilla	MODERN SPECIES		ENSGGOG00000043302	ENSGGOG00000043813	CLCA4 (ENSGGOG00000014623) #13	CLCA1 (ENSGGOG00000011756) #14	CLCA2 (ENSGGOG00000003746) #15	ENSGGOG00000036344	ODF2L (ENSGGOG00000039102) #16	ODF2L (ENSGGOG00000002571) #16	ENSGGOG00000022054	COL24A1 (ENSGGOG00000000424) #17	ZNHIT6 (ENSGGOG00000001289) #18	CCN1 (ENSGGOG00000006978) #19	ENSGGOG00000037302	ENSGGOG00000041543 #20	ENSGGOG00000044072 #21	C1orf52 (ENSGGOG00000027688) #22	SYDE2 (ENSGGOG00000002813) #23	DNAI3 (ENSGGOG00000024273) #24	MCOLN3 (ENSGGOG00000007413)	MCOLN2 (ENSGGOG00000012178)	LPAR3 (ENSGGOG00000011067)	SSX2IP (ENSGGOG00000002229)	CTBS (ENSGGOG00000015738)	ENSGGOG00000039621	ENSGGOG00000026782	RPF1 (ENSGGOG00000015862)	DNASE2B (ENSGGOG00000007963)	ENSGGOG00000042098	SAMD13 (ENSGGOG00000002150)	ENSGGOG00000039232	ENSGGOG00000038622
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00530000063408.B #9	ENSGT00940000164507	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b.f #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078
Pan	ANCESTRAL SPECIES		ENSGT00530000063408.B #9	ENSGT00940000164507	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b.f #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT00910000145621	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT01010000224294	ENSGT00940000161169
Chimpanzee	MODERN SPECIES		HS2ST1 (ENSPTRG00000000927) #9	SELENOF (ENSPTRG00000046631) #10	SH3GLB1 (ENSPTRG00000000925) #11	ENSPTRG00000051840	ENSPTRG00000044041	CLCA4 (ENSPTRG00000000923) #13	CLCA1 (ENSPTRG00000000922) #14	CLCA2 (ENSPTRG00000000921) #15	ODF2L (ENSPTRG00000000919) #16	COL24A1 (ENSPTRG00000052159) #17	ZNHIT6 (ENSPTRG00000000917) #18	CCN1 (ENSPTRG00000000916) #19	ENSPTRG00000045650	DDAH1 (ENSPTRG00000000915) #20	BCL10 (ENSPTRG00000000914) #21	C1H1orf52 (ENSPTRG00000000913) #22	SYDE2 (ENSPTRG00000000912) #23	DNAI3 (ENSPTRG00000000910) #24	MCOLN3 (ENSPTRG00000000909)	MCOLN2 (ENSPTRG00000000908)	LPAR3 (ENSPTRG00000000907)	SSX2IP (ENSPTRG00000000906)	CTBS (ENSPTRG00000000904)	SPATA1 (ENSPTRG00000000903)	GNG5 (ENSPTRG00000000902)	RPF1 (ENSPTRG00000000901)	DNASE2B (ENSPTRG00000000900)	ENSPTRG00000043173	SAMD13 (ENSPTRG00000030549)	ENSPTRG00000041946	ENSPTRG00000051420
Bonobo	MODERN SPECIES		ENSPPAG00000032573	HS2ST1 (ENSPPAG00000039539) #9	SELENOF (ENSPPAG00000034847) #10	SH3GLB1 (ENSPPAG00000037511) #11	ENSPPAG00000027864	CLCA4 (ENSPPAG00000030240) #13	CLCA1 (ENSPPAG00000042810) #14	CLCA2 (ENSPPAG00000037646) #15	ODF2L (ENSPPAG00000035946) #16	COL24A1 (ENSPPAG00000031760) #17	ZNHIT6 (ENSPPAG00000044095) #18	CCN1 (ENSPPAG00000036034) #19	ENSPPAG00000008964	ENSPPAG00000032273 #20	ENSPPAG00000039334 #21	C1orf52 (ENSPPAG00000033419) #22	SYDE2 (ENSPPAG00000008094) #23	DNAI3 (ENSPPAG00000028762) #24	MCOLN3 (ENSPPAG00000018460)	MCOLN2 (ENSPPAG00000035292)	LPAR3 (ENSPPAG00000042081)	SSX2IP (ENSPPAG00000030204)	CTBS (ENSPPAG00000041122)	SPATA1 (ENSPPAG00000031268)	ENSPPAG00000034135	RPF1 (ENSPPAG00000038610)	DNASE2B (ENSPPAG00000031087)	ENSPPAG00000042063	SAMD13 (ENSPPAG00000028733)	ENSPPAG00000028069	PRKACB (ENSPPAG00000031832)
Human	MODERN SPECIES		PKN2 (ENSG00000065243) #7	LMO4 (ENSG00000143013) #8	ENSG00000267561	HS2ST1 (ENSG00000153936) #9	SELENOF (ENSG00000183291) #10	SH3GLB1 (ENSG00000097033) #11	CLCA4 (ENSG00000016602) #13	CLCA1 (ENSG00000016490) #14	CLCA2 (ENSG00000137975) #15	ODF2L (ENSG00000122417) #16	COL24A1 (ENSG00000171502) #17	ZNHIT6 (ENSG00000117174) #18	CCN1 (ENSG00000142871) #19	DDAH1 (ENSG00000153904) #20	BCL10 (ENSG00000142867) #21	C1orf52 (ENSG00000162642) #22	SYDE2 (ENSG00000097096) #23	MCOLN3 (ENSG00000055732)	DNAI3 (ENSG00000162643) #24	MCOLN2 (ENSG00000153898)	LPAR3 (ENSG00000171517)	SSX2IP (ENSG00000117155)	CTBS (ENSG00000117151)	SPATA1 (ENSG00000122432)	GNG5 (ENSG00000174021)	RPF1 (ENSG00000117133)	DNASE2B (ENSG00000137976)	SAMD13 (ENSG00000203943)	PRKACB (ENSG00000142875)	TTLL7 (ENSG00000137941)	ADGRL2 (ENSG00000117114)
Orangutan	MODERN SPECIES		LMO4 (ENSPPYG00000035178) #8	HS2ST1 (ENSPPYG00000001183) #9	ENSPPYG00000041718 #10	SH3GLB1 (ENSPPYG00000001185) #11	ENSPPYG00000039489	CLCA4 (ENSPPYG00000001186) #13	CLCA1 (ENSPPYG00000001187) #14	CLCA2 (ENSPPYG00000001188) #15	ODF2L (ENSPPYG00000001189) #16	COL24A1 (ENSPPYG00000001190) #17	ZNHIT6 (ENSPPYG00000001191) #18	CCN1 (ENSPPYG00000001192) #19	DDAH1 (ENSPPYG00000001193) #20	BCL10 (ENSPPYG00000001194) #21	DNAI3 (ENSPPYG00000001197) #24	C1orf52 (ENSPPYG00000001195) #22	SYDE2 (ENSPPYG00000001196) #23	MCOLN3 (ENSPPYG00000001198)	MCOLN2 (ENSPPYG00000001199)	LPAR3 (ENSPPYG00000001200)	SSX2IP (ENSPPYG00000001201)	CTBS (ENSPPYG00000001203)	SPATA1 (ENSPPYG00000001204)	GNG5 (ENSPPYG00000040658)	RPF1 (ENSPPYG00000001206)	DNASE2B (ENSPPYG00000001207)	ENSPPYG00000038224	ENSPPYG00000030371	ENSPPYG00000041194	PRKACB (ENSPPYG00000001209)	TTLL7 (ENSPPYG00000001210)
Gibbon	MODERN SPECIES	2	HS2ST1 (ENSNLEG00000010190) #9	ENSNLEG00000010186 #10	SH3GLB1 (ENSNLEG00000010180) #11	ENSNLEG00000035396	ENSNLEG00000029420	CLCA4 (ENSNLEG00000010158) #13	ENSNLEG00000010178	CLCA1 (ENSNLEG00000010144) #14	CLCA2 (ENSNLEG00000010136) #15	ODF2L (ENSNLEG00000010126) #16	COL24A1 (ENSNLEG00000010050) #17	ZNHIT6 (ENSNLEG00000010042) #18	CCN1 (ENSNLEG00000010037) #19	DDAH1 (ENSNLEG00000010030) #20	ENSNLEG00000032635 #21	C1orf52 (ENSNLEG00000010021) #22	SYDE2 (ENSNLEG00000010018) #23	DNAI3 (ENSNLEG00000010010) #24	MCOLN3 (ENSNLEG00000009997)	MCOLN2 (ENSNLEG00000009988)	LPAR3 (ENSNLEG00000009986)	SSX2IP (ENSNLEG00000009961)	CTBS (ENSNLEG00000009947)	ENSNLEG00000009935	ENSNLEG00000009934	RPF1 (ENSNLEG00000009930)	DNASE2B (ENSNLEG00000009919)	ENSNLEG00000028021	SAMD13 (ENSNLEG00000009912)	PRKACB (ENSNLEG00000009888)	ENSNLEG00000009911
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00940000155667 #11	ENSGT01040000240503.C.m.b	ENSGT01040000240503.C.n	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00910000147782	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078
Cercopithecinae	DUPLICATION
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT01040000240503.C.m.b	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00910000147782	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398.m #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000155667 #11	ENSGT01040000240503.C.m.b	ENSGT01040000240503.C.n	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00910000147782	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398.m #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078
Macaca	ANCESTRAL SPECIES		ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT01040000240503.C.m.b	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00910000147782	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398.m #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT01040000240503.C.m.b	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00950000182971.B.b.d.`b.b	ENSGT00940000164709.a.b.b.a.b.b.a.b.a.b.a	ENSGT00490000043442 #21	ENSGT00390000017398.m #22	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.a.a.b.b	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169
Rhesus	MODERN SPECIES		LMO4 (ENSMMUG00000017383) #8	HS2ST1 (ENSMMUG00000014056) #9	SELENOF (ENSMMUG00000016554) #10	SH3GLB1 (ENSMMUG00000013487) #11	ENSMMUG00000031997	ENSMMUG00000000813	CLCA4 (ENSMMUG00000010306) #13	CLCA1 (ENSMMUG00000006836) #14	ODF2L (ENSMMUG00000001380) #16	COL24A1 (ENSMMUG00000056386) #17	ZNHIT6 (ENSMMUG00000013203) #18	CCN1 (ENSMMUG00000013197) #19	DDAH1 (ENSMMUG00000014573) #20	ENSMMUG00000063360	BCL10 (ENSMMUG00000005720) #21	C1H1orf52 (ENSMMUG00000010020) #22	ENSMMUG00000053858	SYDE2 (ENSMMUG00000062232) #23	DNAI3 (ENSMMUG00000008932) #24	MCOLN3 (ENSMMUG00000005361)	MCOLN2 (ENSMMUG00000015403)	LPAR3 (ENSMMUG00000015402)	SSX2IP (ENSMMUG00000006203)	CTBS (ENSMMUG00000010127)	SPATA1 (ENSMMUG00000022183)	GNG5 (ENSMMUG00000022182)	DNASE2B (ENSMMUG00000000406)	UOX (ENSMMUG00000000404)	SAMD13 (ENSMMUG00000000402)	PRKACB (ENSMMUG00000003457)	TTLL7 (ENSMMUG00000016591)
Pig-tailed macaque	MODERN SPECIES	582	SH3GLB1 (ENSMNEG00000039647) #11	ENSMNEG00000038414	ENSMNEG00000011468	ENSMNEG00000028586	CLCA4 (ENSMNEG00000028107) #13	CLCA1 (ENSMNEG00000041265) #14	CLCA2 (ENSMNEG00000019614) #15	ODF2L (ENSMNEG00000043756) #16	COL24A1 (ENSMNEG00000038307) #17	ZNHIT6 (ENSMNEG00000040791) #18	ENSMNEG00000028396	CCN1 (ENSMNEG00000044316) #19	ENSMNEG00000027123	DDAH1 (ENSMNEG00000044101) #20	BCL10 (ENSMNEG00000041167) #21	ENSMNEG00000038949 #22	SYDE2 (ENSMNEG00000041819) #23	DNAI3 (ENSMNEG00000038794) #24	MCOLN3 (ENSMNEG00000041473)	MCOLN2 (ENSMNEG00000031675)	LPAR3 (ENSMNEG00000028515)	SSX2IP (ENSMNEG00000032502)	CTBS (ENSMNEG00000015862)	SPATA1 (ENSMNEG00000026868)	ENSMNEG00000037441	RPF1 (ENSMNEG00000029462)	DNASE2B (ENSMNEG00000033755)	ENSMNEG00000032497	SAMD13 (ENSMNEG00000028489)	PRKACB (ENSMNEG00000039211)	TTLL7 (ENSMNEG00000040306)
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT01040000240503.C.n	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00910000147782	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398.m #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078
Olive baboon	MODERN SPECIES		LMO4 (ENSPANG00000010805) #8	HS2ST1 (ENSPANG00000007566) #9	SELENOF (ENSPANG00000016208) #10	SH3GLB1 (ENSPANG00000022726) #11	ENSPANG00000029610	ENSPANG00000004994	CLCA4 (ENSPANG00000002387) #13	CLCA1 (ENSPANG00000002388) #14	ENSPANG00000050633	CLCA2 (ENSPANG00000030570) #15	ODF2L (ENSPANG00000025618) #16	COL24A1 (ENSPANG00000026362) #17	ZNHIT6 (ENSPANG00000004996) #18	CCN1 (ENSPANG00000007480) #19	ENSPANG00000016437 #21	C1orf52 (ENSPANG00000016435) #22	SYDE2 (ENSPANG00000010806) #23	ENSPANG00000044964	MCOLN3 (ENSPANG00000006002)	DNAI3 (ENSPANG00000000769) #24	MCOLN2 (ENSPANG00000000768)	LPAR3 (ENSPANG00000036959)	SSX2IP (ENSPANG00000025619)	CTBS (ENSPANG00000005231)	SPATA1 (ENSPANG00000010807)	GNG5 (ENSPANG00000031198)	RPF1 (ENSPANG00000010052)	DNASE2B (ENSPANG00000016899)	ENSPANG00000047198	ENSPANG00000011777	SAMD13 (ENSPANG00000001347)
Cercopithecinae_d	ANCESTRAL SPECIES	19	ENSGT00940000155667 #11	ENSGT01040000240503.C.n	ENSGT00940000157555	ENSGT00940000155097	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00910000147782	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398.m #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078
Sooty mangabey	MODERN SPECIES	206	SH3GLB1 (ENSCATG00000040359) #11	ENSCATG00000030962	ENSCATG00000042894	ENSCATG00000021850	CLCA4 (ENSCATG00000037640) #13	CLCA1 (ENSCATG00000031780) #14	CLCA2 (ENSCATG00000039534) #15	ODF2L (ENSCATG00000038042) #16	COL24A1 (ENSCATG00000039662) #17	ZNHIT6 (ENSCATG00000042430) #18	ENSCATG00000018597	CCN1 (ENSCATG00000033425) #19	ENSCATG00000017253	DDAH1 (ENSCATG00000029993) #20	BCL10 (ENSCATG00000033396) #21	C1orf52 (ENSCATG00000042900) #22	SYDE2 (ENSCATG00000036631) #23	DNAI3 (ENSCATG00000033130) #24	ENSCATG00000015242	MCOLN3 (ENSCATG00000005637)	MCOLN2 (ENSCATG00000031947)	LPAR3 (ENSCATG00000032286)	SSX2IP (ENSCATG00000041325)	CTBS (ENSCATG00000040682)	SPATA1 (ENSCATG00000031914)	ENSCATG00000033299	RPF1 (ENSCATG00000010531)	DNASE2B (ENSCATG00000035673)	ENSCATG00000040810	SAMD13 (ENSCATG00000031358)	PRKACB (ENSCATG00000042182)
Drill	MODERN SPECIES	844	ENSMLEG00000032120	ENSMLEG00000002129	ENSMLEG00000031336	CLCA4 (ENSMLEG00000039886) #13	CLCA1 (ENSMLEG00000035926) #14	CLCA2 (ENSMLEG00000043718) #15	ODF2L (ENSMLEG00000031271) #16	COL24A1 (ENSMLEG00000000835) #17	ZNHIT6 (ENSMLEG00000035430) #18	ENSMLEG00000022308	CCN1 (ENSMLEG00000033648) #19	ENSMLEG00000000851	DDAH1 (ENSMLEG00000033808) #20	ENSMLEG00000036908	BCL10 (ENSMLEG00000036065) #21	ENSMLEG00000000077 #22	SYDE2 (ENSMLEG00000041726) #23	DNAI3 (ENSMLEG00000036533) #24	MCOLN3 (ENSMLEG00000034178)	MCOLN2 (ENSMLEG00000026041)	LPAR3 (ENSMLEG00000043685)	SSX2IP (ENSMLEG00000024502)	CTBS (ENSMLEG00000033283)	SPATA1 (ENSMLEG00000040493)	GNG5 (ENSMLEG00000039037)	RPF1 (ENSMLEG00000038165)	ENSMLEG00000025772
Vervet Monkey	MODERN SPECIES	12	PKN2 (ENSCSAG00000001444) #7	LMO4 (ENSCSAG00000001442) #8	HS2ST1 (ENSCSAG00000001441) #9	SELENOF (ENSCSAG00000001440) #10	SH3GLB1 (ENSCSAG00000001439) #11	ENSCSAG00000001438	CLCA4 (ENSCSAG00000001436) #13	CLCA1 (ENSCSAG00000001434) #14	CLCA2 (ENSCSAG00000001433) #15	ODF2L (ENSCSAG00000001432) #16	COL24A1 (ENSCSAG00000001431) #17	ZNHIT6 (ENSCSAG00000001430) #18	CCN1 (ENSCSAG00000001429) #19	DDAH1 (ENSCSAG00000001428) #20	BCL10 (ENSCSAG00000001427) #21	ENSCSAG00000001426 #22	SYDE2 (ENSCSAG00000001425) #23	DNAI3 (ENSCSAG00000001424) #24	MCOLN3 (ENSCSAG00000001423)	MCOLN2 (ENSCSAG00000001422)	LPAR3 (ENSCSAG00000001421)	SSX2IP (ENSCSAG00000001420)	CTBS (ENSCSAG00000001419)	SPATA1 (ENSCSAG00000001418)	ENSCSAG00000001417	DNASE2B (ENSCSAG00000001416)	ENSCSAG00000001415	SAMD13 (ENSCSAG00000001414)	PRKACB (ENSCSAG00000001413)	TTLL7 (ENSCSAG00000001411)	ADGRL2 (ENSCSAG00000001410)
Cercopithecinae	ANCESTRAL SPECIES	50															ENSGT00940000154453.b.a.b.b	ENSGT00390000017398.n #22	ENSGT00940000163744.b	ENSGT00940000153236.b.b.b.a.a.a.a.b
Cercopithecinae_a	ANCESTRAL SPECIES	57															ENSGT00940000154453.b.a.b.b	ENSGT00390000017398.n #22	ENSGT00940000163744.b	ENSGT00940000153236.b.b.b.a.a.a.a.b
Macaca	ANCESTRAL SPECIES	21	ENSGT00390000008152.B.a	ENSGT00940000162643	ENSGT01050000244941.B.c	ENSGT00950000183110.a	ENSGT00550000075064	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00390000007479.y.b	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00940000153236.a.a.b.b	ENSGT00940000162960.A.c	ENSGT00940000154251.A.a.b	ENSGT01100000263507.D.a.a.a.b.b.b	ENSGT00940000154251.A.b.b.a.b.a.b	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.b	ENSGT00940000161765.A	ENSGT00390000017398.n #22	ENSGT00940000163744.b	ENSGT00940000153236.b.b.b.a.a.a.a.b
Pig-tailed macaque	MODERN SPECIES	158	ENSMNEG00000037128	ZNF93 (ENSMNEG00000029151)	ENSMNEG00000031867	ENSMNEG00000029397	ENSMNEG00000020719	ENSMNEG00000038897	ENSMNEG00000028060	ENSMNEG00000035467	ZNF708 (ENSMNEG00000030112)	ENSMNEG00000039384	ZNF493 (ENSMNEG00000031668)	ENSMNEG00000037674	ENSMNEG00000028241	ENSMNEG00000044249	ENSMNEG00000038592	ENSMNEG00000028075 #22	ZNF43 (ENSMNEG00000041691)	ENSMNEG00000033764	ZNF676 (ENSMNEG00000032899)
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00390000007227.b	ENSGT00390000008152.B.a	ENSGT00940000162643	ENSGT01050000244941.B.c	ENSGT00950000183110.a	ENSGT00550000075064	ENSGT00950000182755.b.a.a.b.a.b.a.a	ENSGT00950000182755.b.a.a.a.a.a.b.d.a	ENSGT00940000165497.F.b.b.a.a.a	ENSGT00940000153236.a.a.b.b	ENSGT00940000162960.A.c	ENSGT00940000154251.A.a.b	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.b	ENSGT00940000161765.A	ENSGT01100000263493.a.b.b.a.a.b.b.b.a.a	ENSGT00390000017398.n #22	ENSGT00940000163744.b	ENSGT00940000153236.b.b.b.a.a.a.a.b	ENSGT00940000165698.B.a.b	ENSGT00940000165698.A	ENSGT00940000163381.a	ENSGT00940000153236.b.b.b.a.a.a.a.a.a.a	ENSGT00940000153236.b.a.a.b.b.a.b	ENSGT00940000154251.A.b.b.a.b.b	ENSGT00910000146855.h	ENSGT00940000153236.b.a.a.b.b.b	ENSGT00940000154915.j	ENSGT00940000154453.b.a.a.a.b	ENSGT00390000001014.h	ENSGT00940000161356	ENSGT00390000010067
Rhesus	MODERN SPECIES	10	ZNF93 (ENSMMUG00000054055)	ENSMMUG00000063297	ZNF682 (ENSMMUG00000039104)	ENSMMUG00000056683	ENSMMUG00000052723	ENSMMUG00000049530	ENSMMUG00000031426	ENSMMUG00000062204	ENSMMUG00000062866	ZNF708 (ENSMMUG00000003686)	ZNF493 (ENSMMUG00000015533)	ZNF429 (ENSMMUG00000045427)	ENSMMUG00000056719	ENSMMUG00000028809	ZNF43 (ENSMMUG00000047027)	ENSMMUG00000046906 #22	ENSMMUG00000061186	ENSMMUG00000040273	ZNF208 (ENSMMUG00000063815)	ENSMMUG00000064561	ENSMMUG00000062521	ENSMMUG00000060408	ENSMMUG00000038943	ENSMMUG00000053961	ENSMMUG00000028816	ENSMMUG00000059643	ENSMMUG00000045698	ENSMMUG00000064404	ENSMMUG00000063831	ENSMMUG00000037794	ENSMMUG00000062694
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000003085	ENSMFAG00000037779	ENSMFAG00000061876	ENSMFAG00000033840	ZNF85 (ENSMFAG00000040852)	ZNF714 (ENSMFAG00000033982)	ENSMFAG00000065513	ENSMFAG00000064779	ZNF708 (ENSMFAG00000042298)	ZNF493 (ENSMFAG00000034400)	ENSMFAG00000065435	ENSMFAG00000049220	ENSMFAG00000063677	ZNF429 (ENSMFAG00000041253)	ENSMFAG00000037086	C1orf52 (ENSMFAG00000051304) #22	ZNF43 (ENSMFAG00000060864)	ENSMFAG00000044974	ENSMFAG00000042521	ENSMFAG00000032786	ENSMFAG00000065754	ENSMFAG00000037193	ENSMFAG00000037242	ENSMFAG00000044588	ENSMFAG00000030842	ENSMFAG00000001832	ZNF726 (ENSMFAG00000032109)	ENSMFAG00000040354	ENSMFAG00000065576	ZNF254 (ENSMFAG00000003947)	ENSMFAG00000039830
Cercopithecinae_b	ANCESTRAL SPECIES	245															ENSGT00940000154453.b.a.b.b	ENSGT00390000017398.n #22
Cercopithecinae_d	ANCESTRAL SPECIES	348															ENSGT00940000154453.b.a.b.b	ENSGT00390000017398.n #22
Drill	MODERN SPECIES	739		ENSMLEG00000035225	ENSMLEG00000041483	ENSMLEG00000043107	ENSMLEG00000036989	ENSMLEG00000035682	ENSMLEG00000017218	ZNF708 (ENSMLEG00000037376)	ENSMLEG00000003090	ENSMLEG00000031326	ENSMLEG00000037534	ZNF493 (ENSMLEG00000031771)	ENSMLEG00000038989	ENSMLEG00000040744	ENSMLEG00000031486	ENSMLEG00000033641 #22	ENSMLEG00000040268	TRIM32 (ENSMLEG00000026607)	ENSMLEG00000035253	TSPAN8 (ENSMLEG00000042492)	ENSMLEG00000036938	LGR5 (ENSMLEG00000029248)	ZFC3H1 (ENSMLEG00000029967)	THAP2 (ENSMLEG00000034029)	TMEM19 (ENSMLEG00000036183)	RAB21 (ENSMLEG00000032861)	TBC1D15 (ENSMLEG00000034361)	TPH2 (ENSMLEG00000000709)
Vervet Monkey	MODERN SPECIES	25	ZNF682 (ENSCSAG00000005029)	ENSCSAG00000005026	ENSCSAG00000005021	ENSCSAG00000005017	ENSCSAG00000005014	ZNF85 (ENSCSAG00000005012)	ENSCSAG00000005006	ENSCSAG00000005003	ENSCSAG00000004996	ENSCSAG00000004993	ENSCSAG00000004989	ENSCSAG00000004984	ENSCSAG00000004980	ENSCSAG00000004976	ENSCSAG00000004974	ENSCSAG00000018502 #22	ZNF43 (ENSCSAG00000004971)	ENSCSAG00000004967	ENSCSAG00000004964	ENSCSAG00000004956	ENSCSAG00000004945	ENSCSAG00000018504	ENSCSAG00000004935	ENSCSAG00000004928	ENSCSAG00000004924	ENSCSAG00000004919	ZNF724 (ENSCSAG00000004914)	ENSCSAG00000004910	ENSCSAG00000018506	ENSCSAG00000004906	ZNF681 (ENSCSAG00000004903)
Rhinopithecus	DUPLICATION
Rhinopithecus	ANCESTRAL SPECIES	112	ENSGT00940000155667 #11	ENSGT01040000240503.C.m.b	ENSGT01040000240503.C.n	ENSGT00940000157555	ENSGT00940000155097	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00910000147782	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398.o #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a.c	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000161169	ENSGT00940000159078
Black snub-nosed monkey	MODERN SPECIES	137	SELENOF (ENSRBIG00000026319) #10	SH3GLB1 (ENSRBIG00000027795) #11	ENSRBIG00000043193	ENSRBIG00000040098	ENSRBIG00000039377	CLCA4 (ENSRBIG00000031752) #13	CLCA1 (ENSRBIG00000043230) #14	CLCA2 (ENSRBIG00000031853) #15	ODF2L (ENSRBIG00000040478) #16	COL24A1 (ENSRBIG00000040549) #17	ZNHIT6 (ENSRBIG00000001418) #18	ENSRBIG00000029091	CCN1 (ENSRBIG00000038743) #19	DDAH1 (ENSRBIG00000034663) #20	BCL10 (ENSRBIG00000044051) #21	ENSRBIG00000032729 #22	SYDE2 (ENSRBIG00000034172) #23	DNAI3 (ENSRBIG00000034137) #24	ENSRBIG00000035958	MCOLN2 (ENSRBIG00000032726)
Golden snub-nosed monkey	MODERN SPECIES	2362											ENSRROG00000028931 #17	ZNHIT6 (ENSRROG00000028580) #18	CCN1 (ENSRROG00000028951) #19	DDAH1 (ENSRROG00000009892) #20	BCL10 (ENSRROG00000044289) #21	ENSRROG00000027907 #22	SYDE2 (ENSRROG00000029434) #23	DNAI3 (ENSRROG00000030691) #24	ENSRROG00000040243	MCOLN2 (ENSRROG00000036998)	ENSRROG00000035313	SSX2IP (ENSRROG00000043233)	CTBS (ENSRROG00000027909)	SPATA1 (ENSRROG00000040432)	GNG5 (ENSRROG00000041242)	RPF1 (ENSRROG00000038090)	ENSRROG00000036333	DNASE2B (ENSRROG00000037799)	ENSRROG00000023758	SAMD13 (ENSRROG00000042230)	PRKACB (ENSRROG00000022851)
Rhinopithecus	ANCESTRAL SPECIES	787															ENSGT00940000154453.b.a.b.b.b	ENSGT00390000017398.p #22	ENSGT00940000163744.b	ENSGT00940000153236.b.b.b.a.a.a.a.b
Black snub-nosed monkey	MODERN SPECIES	2714																ENSRBIG00000028719 #22
Golden snub-nosed monkey	MODERN SPECIES	1656												ZNF429 (ENSRROG00000044782)	ENSRROG00000042661	ENSRROG00000032726	ENSRROG00000042229	ENSRROG00000042207 #22	ZNF43 (ENSRROG00000029715)	ENSRROG00000041485	ENSRROG00000028857
Platyrrhini	ANCESTRAL SPECIES		ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00910000147782	ENSGT00940000155151.b #19	ENSGT00960000186836	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000161169
Cebidae	ANCESTRAL SPECIES	1	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00910000147782	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b	ENSGT00940000161169
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	19	HS2ST1 (ENSCJAG00000038902) #9	ENSCJAG00000074244	SELENOF (ENSCJAG00000038701) #10	ENSCJAG00000072388	SH3GLB1 (ENSCJAG00000007335) #11	ENSCJAG00000007329	CLCA4 (ENSCJAG00000007319) #13	CLCA1 (ENSCJAG00000007285) #14	CLCA2 (ENSCJAG00000007251) #15	ODF2L (ENSCJAG00000007184) #16	COL24A1 (ENSCJAG00000007060) #17	ZNHIT6 (ENSCJAG00000007041) #18	CCN1 (ENSCJAG00000012726) #19	DDAH1 (ENSCJAG00000040455) #20	BCL10 (ENSCJAG00000052966) #21	ENSCJAG00000007022 #22	DNAI3 (ENSCJAG00000006895) #24	SYDE2 (ENSCJAG00000007003) #23	MCOLN2 (ENSCJAG00000006843)	LPAR3 (ENSCJAG00000039205)	SSX2IP (ENSCJAG00000007456)	CTBS (ENSCJAG00000007444)	SPATA1 (ENSCJAG00000007432)	ENSCJAG00000087345	RPF1 (ENSCJAG00000007400)	DNASE2B (ENSCJAG00000007380)	ENSCJAG00000007377	SAMD13 (ENSCJAG00000038186)	PRKACB (ENSCJAG00000007331)	TTLL7 (ENSCJAG00000007255)	ENSCJAG00000073777
Marmoset	MODERN SPECIES	21	KCNA5 (ENSCJAG00000068399)	KCNA1 (ENSCJAG00000068371)	KCNA6 (ENSCJAG00000061475)	ENSCJAG00000075610	ENSCJAG00000001647	ENSCJAG00000001628	FGF6 (ENSCJAG00000001613)	FGF23 (ENSCJAG00000069632)	TIGAR (ENSCJAG00000040111)	CCND2 (ENSCJAG00000001593)	ENSCJAG00000001586	ENSCJAG00000021822	PARP11 (ENSCJAG00000001570)	ENSCJAG00000082222	CRACR2A (ENSCJAG00000018917)	ENSCJAG00000063173 #22	PRMT8 (ENSCJAG00000018891)	ENSCJAG00000018882	TEAD4 (ENSCJAG00000018796)	ENSCJAG00000085073	FOXM1 (ENSCJAG00000018781)	RHNO1 (ENSCJAG00000018790)	TEX52 (ENSCJAG00000018779)	NRIP2 (ENSCJAG00000083523)	ITFG2 (ENSCJAG00000018765)	FKBP4 (ENSCJAG00000018746)	ENSCJAG00000006744	ENSCJAG00000076932	ENSCJAG00000064493	ENSCJAG00000079693	CACNA1C (ENSCJAG00000000732)
Cebidae_a	ANCESTRAL SPECIES		ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00910000147782	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT00390000013931.a.a	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.c.b	ENSGT00940000153231.B.w	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00910000147804	ENSGT00530000063936.b
Bolivian squirrel monkey	MODERN SPECIES	45					CLCA4 (ENSSBOG00000029808) #13	CLCA1 (ENSSBOG00000031532) #14	CLCA2 (ENSSBOG00000034114) #15	ODF2L (ENSSBOG00000019975) #16	COL24A1 (ENSSBOG00000028125) #17	ZNHIT6 (ENSSBOG00000026850) #18	ENSSBOG00000030704	CCN1 (ENSSBOG00000018139) #19	DDAH1 (ENSSBOG00000029891) #20	ENSSBOG00000021699	BCL10 (ENSSBOG00000032733) #21	C1orf52 (ENSSBOG00000023463) #22	ENSSBOG00000031654	SYDE2 (ENSSBOG00000032922) #23	DNAI3 (ENSSBOG00000020387) #24	MCOLN3 (ENSSBOG00000031702)	MCOLN2 (ENSSBOG00000019614)	LPAR3 (ENSSBOG00000022469)	SSX2IP (ENSSBOG00000030187)	CTBS (ENSSBOG00000029974)	SPATA1 (ENSSBOG00000032732)	ENSSBOG00000025678	RPF1 (ENSSBOG00000020439)	ENSSBOG00000029709	DNASE2B (ENSSBOG00000036044)	ENSSBOG00000023319	SAMD13 (ENSSBOG00000035540)
Capuchin	MODERN SPECIES	261	HS2ST1 (ENSCCAG00000026104) #9	SELENOF (ENSCCAG00000033446) #10	ENSCCAG00000031456	ENSCCAG00000000976	SH3GLB1 (ENSCCAG00000029842) #11	ENSCCAG00000035676	CLCA4 (ENSCCAG00000027130) #13	CLCA1 (ENSCCAG00000032498) #14	CLCA2 (ENSCCAG00000022983) #15	ODF2L (ENSCCAG00000036639) #16	COL24A1 (ENSCCAG00000026567) #17	ZNHIT6 (ENSCCAG00000035034) #18	CCN1 (ENSCCAG00000022293) #19	DDAH1 (ENSCCAG00000031737) #20	BCL10 (ENSCCAG00000036016) #21	C1orf52 (ENSCCAG00000022391) #22	ENSCCAG00000032916	SYDE2 (ENSCCAG00000011416) #23	DNAI3 (ENSCCAG00000034917) #24	MCOLN3 (ENSCCAG00000024680)	MCOLN2 (ENSCCAG00000021351)	LPAR3 (ENSCCAG00000022881)	SSX2IP (ENSCCAG00000025619)	CTBS (ENSCCAG00000034072)	SPATA1 (ENSCCAG00000033239)	ENSCCAG00000025681	RPF1 (ENSCCAG00000038077)	DNASE2B (ENSCCAG00000031055)	ENSCCAG00000021796	ENSCCAG00000024817	SAMD13 (ENSCCAG00000024780)
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	1222												CCN1 (ENSANAG00000021011) #19	ENSANAG00000020702	DDAH1 (ENSANAG00000036589) #20	BCL10 (ENSANAG00000032404) #21	ENSANAG00000019838 #22	SYDE2 (ENSANAG00000037204) #23	ENSANAG00000037128	DNAI3 (ENSANAG00000033437) #24	MCOLN3 (ENSANAG00000014281)	MCOLN2 (ENSANAG00000035061)	LPAR3 (ENSANAG00000021394)	SSX2IP (ENSANAG00000028935)	ENSANAG00000034138	SPATA1 (ENSANAG00000028513)	GNG5 (ENSANAG00000037163)	RPF1 (ENSANAG00000035706)	ENSANAG00000035698	DNASE2B (ENSANAG00000034051)	ENSANAG00000025747	ENSANAG00000033696
Mas night monkey	MODERN SPECIES	1003		ENSANAG00000030795	ENSANAG00000026597	HTR1E (ENSANAG00000020260)	CGA (ENSANAG00000025451)	ZNF292 (ENSANAG00000023824)	SMIM8 (ENSANAG00000031913)	C6orf163 (ENSANAG00000020423)	ENSANAG00000036217	SLC35A1 (ENSANAG00000023414)	RARS2 (ENSANAG00000027711)	ORC3 (ENSANAG00000038422)	AKIRIN2 (ENSANAG00000030566)	ENSANAG00000027715	SPACA1 (ENSANAG00000022733)	ENSANAG00000022019 #22	RNGTT (ENSANAG00000022118)	ENSANAG00000001631	ENSANAG00000027710	SRSF12 (ENSANAG00000023238)	PM20D2 (ENSANAG00000028063)	GABRR2 (ENSANAG00000027407)	UBE2J1 (ENSANAG00000023523)	RRAGD (ENSANAG00000023087)	ENSANAG00000035891	ANKRD6 (ENSANAG00000035580)	LYRM2 (ENSANAG00000033734)	MDN1 (ENSANAG00000034484)	CASP8AP2 (ENSANAG00000021679)	GJA10 (ENSANAG00000024124)	BACH2 (ENSANAG00000020444)
Tarsier	MODERN SPECIES	5619											COL24A1 (ENSTSYG00000007947) #17	ZNHIT6 (ENSTSYG00000031685) #18	CCN1 (ENSTSYG00000004929) #19	DDAH1 (ENSTSYG00000036511) #20	BCL10 (ENSTSYG00000010772) #21	CUNH1orf52 (ENSTSYG00000035862) #22	SYDE2 (ENSTSYG00000008423) #23	WDR63 (ENSTSYG00000008813) #24	MCOLN3 (ENSTSYG00000008984)	MCOLN2 (ENSTSYG00000005578)	LPAR3 (ENSTSYG00000010815)	SSX2IP (ENSTSYG00000004276)	CTBS (ENSTSYG00000010036)	SPATA1 (ENSTSYG00000010029)	ENSTSYG00000027698	RPF1 (ENSTSYG00000009961)	DNASE2B (ENSTSYG00000013883)	ENSTSYG00000028321	SAMD13 (ENSTSYG00000000398)
Atlantogenata	ANCESTRAL SPECIES	11	ENSGT00940000154339 #7	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00530000063936.b	ENSGT00940000163788	ENSGT00940000161169
Xenarthra	ANCESTRAL SPECIES	194		ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24
Armadillo	MODERN SPECIES	4216	LMO4 (ENSDNOG00000047628) #8	HS2ST1 (ENSDNOG00000049698) #9	SELENOF (ENSDNOG00000004701) #10	SH3GLB1 (ENSDNOG00000039119) #11	ENSDNOG00000040224	CLCA4 (ENSDNOG00000001159) #13	CLCA1 (ENSDNOG00000001155) #14	CLCA2 (ENSDNOG00000001152) #15	ODF2L (ENSDNOG00000010680) #16	ENSDNOG00000044659	COL24A1 (ENSDNOG00000016150) #17	ZNHIT6 (ENSDNOG00000044251) #18	CCN1 (ENSDNOG00000002945) #19	DDAH1 (ENSDNOG00000035701) #20	ENSDNOG00000010048 #21	C1orf52 (ENSDNOG00000031696) #22	SYDE2 (ENSDNOG00000017951) #23	DNAI3 (ENSDNOG00000017947) #24
Sloth	MODERN SPECIES	4867															BCL10 (ENSCHOG00000012878) #21	C1orf52 (ENSCHOG00000012863) #22
Afrotheria	ANCESTRAL SPECIES	21	ENSGT00940000154339 #7	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078
Afrotheria_a	ANCESTRAL SPECIES	20	ENSGT00390000006671	ENSGT00940000154339 #7	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000160416 #13	ENSGT00940000154682.C #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00940000161169	ENSGT00940000159078
Elephant	MODERN SPECIES	145	GTF2B (ENSLAFG00000006102)	PKN2 (ENSLAFG00000010893) #7	LMO4 (ENSLAFG00000017723) #8	HS2ST1 (ENSLAFG00000011894) #9	SH3GLB1 (ENSLAFG00000017719) #11	ENSLAFG00000007726	CLCA4 (ENSLAFG00000014375) #13	CLCA1 (ENSLAFG00000006917) #14	CLCA2 (ENSLAFG00000006916) #15	ODF2L (ENSLAFG00000010775) #16	ENSLAFG00000012889 #17	ZNHIT6 (ENSLAFG00000032483) #18	CCN1 (ENSLAFG00000022979) #19	DDAH1 (ENSLAFG00000010363) #20	BCL10 (ENSLAFG00000003648) #21	C1orf52 (ENSLAFG00000007499) #22	SYDE2 (ENSLAFG00000016031) #23	DNAI3 (ENSLAFG00000016022) #24	MCOLN3 (ENSLAFG00000016018)	MCOLN2 (ENSLAFG00000029928)	LPAR3 (ENSLAFG00000010892)	SSX2IP (ENSLAFG00000013496)	CTBS (ENSLAFG00000011739)	SPATA1 (ENSLAFG00000013256)	ENSLAFG00000007034	RPF1 (ENSLAFG00000007031)	DNASE2B (ENSLAFG00000031438)	ENSLAFG00000026431	ENSLAFG00000031962	PRKACB (ENSLAFG00000006544)	TTLL7 (ENSLAFG00000022500)
Hyrax	MODERN SPECIES	10712																C1orf52 (ENSPCAG00000006794) #22
Tenrec	MODERN SPECIES	15061																C1orf52 (ENSETEG00000005648) #22
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00940000154339 #7	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000154682.C.p #14	ENSGT00940000154682.C.o #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00530000064273.a.b	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b
Opossum	MODERN SPECIES	1	ENSMODG00000008041	SH3GLB1 (ENSMODG00000008125) #11	ENSMODG00000008134 #10	HS2ST1 (ENSMODG00000008154) #9	LMO4 (ENSMODG00000008163) #8	ENSMODG00000048769	ENSMODG00000007456 #14	CLCA2 (ENSMODG00000000026) #15	ENSMODG00000000056 #16	ENSMODG00000000076	ENSMODG00000048730 #17	ENSMODG00000025703 #18	CCN1 (ENSMODG00000000285) #19	DDAH1 (ENSMODG00000000292) #20	BCL10 (ENSMODG00000037224) #21	C1orf52 (ENSMODG00000000302) #22	SYDE2 (ENSMODG00000000311) #23	DNAI3 (ENSMODG00000000354) #24	MCOLN3 (ENSMODG00000000378)	MCOLN2 (ENSMODG00000000390)	LPAR3 (ENSMODG00000000401)	SSX2IP (ENSMODG00000000409)	CTBS (ENSMODG00000000421)	SPATA1 (ENSMODG00000041648)	ENSMODG00000048242	RPF1 (ENSMODG00000000452)	DNASE2B (ENSMODG00000000513)	ENSMODG00000000498	ENSMODG00000048125	PRKACB (ENSMODG00000000539)	TTLL7 (ENSMODG00000000596)
Marsupialia_b	ANCESTRAL SPECIES	6	ENSGT00940000154339 #7	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000154682.C.p #14	ENSGT00940000154682.C.o #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00530000064273.a.b	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b
Tasmanian devil	MODERN SPECIES	3	GTF2B (ENSSHAG00000005314)	PKN2 (ENSSHAG00000006110) #7	LMO4 (ENSSHAG00000026182) #8	HS2ST1 (ENSSHAG00000004758) #9	SELENOF (ENSSHAG00000026888) #10	SH3GLB1 (ENSSHAG00000024847) #11	ENSSHAG00000030068 #14	ENSSHAG00000006437 #14	CLCA2 (ENSSHAG00000007009) #15	ODF2L (ENSSHAG00000008055) #16	ENSSHAG00000010203	ENSSHAG00000012272 #18	CCN1 (ENSSHAG00000012809) #19	DDAH1 (ENSSHAG00000031838) #20	BCL10 (ENSSHAG00000024145) #21	ENSSHAG00000028512 #22	SYDE2 (ENSSHAG00000014946) #23	DNAI3 (ENSSHAG00000015341) #24	MCOLN3 (ENSSHAG00000015722)	MCOLN2 (ENSSHAG00000015932)	LPAR3 (ENSSHAG00000016258)	SSX2IP (ENSSHAG00000017020)	ENSSHAG00000017130	CTBS (ENSSHAG00000017432)	SPATA1 (ENSSHAG00000017459)	ENSSHAG00000024357	RPF1 (ENSSHAG00000017559)	ENSSHAG00000017746	DNASE2B (ENSSHAG00000017718)	ENSSHAG00000025421	SAMD13 (ENSSHAG00000023065)
Diprotodontia	ANCESTRAL SPECIES	7	ENSGT00940000154339 #7	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000154682.C.p #14	ENSGT00940000154682.C.o #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169
Diprotodontia_a	ANCESTRAL SPECIES	3	ENSGT00940000157730 #8	ENSGT00530000063408.B #9	ENSGT00940000154284.a #10	ENSGT00940000155667 #11	ENSGT00940000157555	ENSGT00940000154682.C.p #14	ENSGT00940000154682.C.o.a #14	ENSGT00940000154682.C.o.b #14	ENSGT00940000161548 #15	ENSGT00530000063497.b #16	ENSGT00940000162448 #17	ENSGT00390000017201 #18	ENSGT00940000155151.b #19	ENSGT00940000157892 #20	ENSGT00490000043442 #21	ENSGT00390000017398 #22	ENSGT01030000234635.a.a.a.a #23	ENSGT00940000156924 #24	ENSGT00950000183036.a.a	ENSGT00950000183036.a.b	ENSGT01050000244941.B.d	ENSGT00390000007688	ENSGT00390000012891	ENSGT00390000003298	ENSGT01100000263525.a.b.b.a	ENSGT00940000153231.B	ENSGT00390000002634.b	ENSGT00940000153229.B	ENSGT00940000163788	ENSGT00530000063936.b	ENSGT00940000161169
Common wonbat	MODERN SPECIES	1039							ENSVURG00010009706 #14	CLCA2 (ENSVURG00010009708) #15	ODF2L (ENSVURG00010009736) #16	ENSVURG00010009753 #17	ENSVURG00010009770 #17	ENSVURG00010009785 #18	CCN1 (ENSVURG00010009801) #19	DDAH1 (ENSVURG00010009811) #20	ENSVURG00010009831 #21	C1orf52 (ENSVURG00010009839) #22	SYDE2 (ENSVURG00010009847) #23	ENSVURG00010009867	DNAI3 (ENSVURG00010009880) #24	MCOLN3 (ENSVURG00010009987)	MCOLN2 (ENSVURG00010009998)	LPAR3 (ENSVURG00010010046)	SSX2IP (ENSVURG00010010062)	CTBS (ENSVURG00010010118)	SPATA1 (ENSVURG00010010137)	ENSVURG00010010149	RPF1 (ENSVURG00010010163)	ENSVURG00010010200	DNASE2B (ENSVURG00010010227)	PRKACB (ENSVURG00010010251)	TTLL7 (ENSVURG00010010284)
koala	MODERN SPECIES	32	ENSPCIG00000014503 #10	ENSPCIG00000014505 #11	ENSPCIG00000016355 #14	ENSPCIG00000036253 #14	ENSPCIG00000007904 ##14	ENSPCIG00000036261	ENSPCIG00000010259 #14	ENSPCIG00000035533	CLCA2 (ENSPCIG00000014520) #15	ENSPCIG00000014539 #16	ENSPCIG00000006638 #17	ENSPCIG00000006645 #18	CCN1 (ENSPCIG00000006652) #19	DDAH1 (ENSPCIG00000006654) #20	BCL10 (ENSPCIG00000006659) #21	C1orf52 (ENSPCIG00000006660) #22	SYDE2 (ENSPCIG00000006661) #23	DNAI3 (ENSPCIG00000006664) #24	MCOLN3 (ENSPCIG00000002891)	MCOLN2 (ENSPCIG00000006673)	LPAR3 (ENSPCIG00000006675)	SSX2IP (ENSPCIG00000006678)	CTBS (ENSPCIG00000006682)	SPATA1 (ENSPCIG00000006684)	ENSPCIG00000006687	RPF1 (ENSPCIG00000006692)	DNASE2B (ENSPCIG00000006696)	ENSPCIG00000033404	ENSPCIG00000006699	SAMD13 (ENSPCIG00000032677)	PRKACB (ENSPCIG00000013356)