Gnathostomata ANCESTRAL SPECIES ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.b ##8 ENSGT00940000154495.b.b ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00530000063497.b #15 ENSGT00940000167622 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00940000163785.b ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b Euteleostomi ANCESTRAL SPECIES 14 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000167622 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000165852 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00940000163785.b ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Sarcopterygii ANCESTRAL SPECIES 17 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000167622 ENSGT00940000162727 ENSGT00940000163466 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000165852 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00940000163785.b ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Tetrapoda ANCESTRAL SPECIES 8 ENSGT00940000160703 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163111.a.b.b Amniota ANCESTRAL SPECIES 9 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT00940000165410 ENSGT00940000153231.B ENSGT01100000263525.a.b.b ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 Mammalia ANCESTRAL SPECIES 5 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT00940000165410 ENSGT00940000153231.B ENSGT01100000263525.a.b.b ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Theria ANCESTRAL SPECIES 3 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT00940000165410 ENSGT00940000153231.B ENSGT01100000263525.a.b.b ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 Eutheria ANCESTRAL SPECIES ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT00940000165410 ENSGT00940000153231.B ENSGT01100000263525.a.b.b ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 Boreoeutheria ANCESTRAL SPECIES ENSGT00500000046198 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Laurasiatheria ANCESTRAL SPECIES ENSGT00500000046198 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00500000046198 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Artiodactyla ANCESTRAL SPECIES ENSGT00500000046198 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Artiodactyla_a ANCESTRAL SPECIES ENSGT00500000046198 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00910000147804 ENSGT00530000063936.b Artiodactyla_b ANCESTRAL SPECIES ENSGT00500000046198 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Pecora ANCESTRAL SPECIES 2 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.a #10 ENSGT00940000157555.b #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT01000000215412 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Percora_a ANCESTRAL SPECIES 1 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.a #10 ENSGT00940000157555.b #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT01000000215412 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Bovidae ANCESTRAL SPECIES 1 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.a #10 ENSGT00940000157555.b #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT01000000215412 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Bovinae ANCESTRAL SPECIES 1 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.a #10 ENSGT00940000157555.b #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT01000000215412 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Bos ANCESTRAL SPECIES ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.a #10 ENSGT00940000157555.b #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT01000000215412 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Bos_a ANCESTRAL SPECIES 1 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.a #10 ENSGT00940000157555.b #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT01000000215412 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00940000159078 Wild yak MODERN SPECIES 151 HS2ST1 (ENSBMUG00000017400) #7 SELENOF (ENSBMUG00000017480) #8 SH3GLB1 (ENSBMUG00000017608) #9 ENSBMUG00000017730 #10 ENSBMUG00000017762 #11 CLCA4 (ENSBMUG00000017782) #12 CLCA1 (ENSBMUG00000017812) #13 CLCA2 (ENSBMUG00000017843) #14 ODF2L (ENSBMUG00000017919) #15 COL24A1 (ENSBMUG00000017985) #16 ENSBMUG00000018023 #17 ZNHIT6 (ENSBMUG00000018058) #18 CCN1 (ENSBMUG00000018082) #19 DDAH1 (ENSBMUG00000018146) #20 BCL10 (ENSBMUG00000018176) #21 C1orf52 (ENSBMUG00000018196) #22 SYDE2 (ENSBMUG00000018219) #23 DNAI3 (ENSBMUG00000018237) #24 MCOLN3 (ENSBMUG00000018289) #25 Domestic yak MODERN SPECIES 22 SELENOF (ENSBGRG00000004000) #8 SH3GLB1 (ENSBGRG00000004071) #9 ENSBGRG00000004351 #11 CLCA4 (ENSBGRG00000004774) #12 CLCA1 (ENSBGRG00000006534) #13 CLCA2 (ENSBGRG00000006661) #14 ENSBGRG00000006706 ODF2L (ENSBGRG00000006729) #15 COL24A1 (ENSBGRG00000006871) #16 ENSBGRG00000000235 #17 ZNHIT6 (ENSBGRG00000000263) #18 CCN1 (ENSBGRG00000000313) #19 ENSBGRG00000000337 DDAH1 (ENSBGRG00000000347) #20 BCL10 (ENSBGRG00000000384) #21 C1orf52 (ENSBGRG00000000411) #22 SYDE2 (ENSBGRG00000000456) #23 DNAI3 (ENSBGRG00000000494) #24 MCOLN3 (ENSBGRG00000000709) #25 MCOLN2 (ENSBGRG00000000755) ##25 ENSBGRG00000000797 LPAR3 (ENSBGRG00000000803) SSX2IP (ENSBGRG00000000833) CTBS (ENSBGRG00000000887) SPATA1 (ENSBGRG00000000917) ENSBGRG00000000963 RPF1 (ENSBGRG00000000983) ENSBGRG00000001021 DNASE2B (ENSBGRG00000001063) ENSBGRG00000001096 PRKACB (ENSBGRG00000001167) Bos_b ANCESTRAL SPECIES 1 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.b.b.b.b.a.b.a.b.a.a ENSGT00940000157555.a #10 ENSGT00940000157555.b #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT01000000215412 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Hybrid Bos Indicus MODERN SPECIES 22 SH3GLB1 (ENSBIXG00005029220) #9 ENSBIXG00005001721 ENSBIXG00005001767 #11 ENSBIXG00005029153 #10 CLCA4 (ENSBIXG00005029144) #12 CLCA1 (ENSBIXG00005005168) #13 CLCA2 (ENSBIXG00005029083) #14 ENSBIXG00005001995 ODF2L (ENSBIXG00005005132) #15 COL24A1 (ENSBIXG00005028988) #16 ZNHIT6 (ENSBIXG00005002133) #18 CCN1 (ENSBIXG00005028896) #19 ENSBIXG00005002260 DDAH1 (ENSBIXG00005002285) #20 BCL10 (ENSBIXG00005028824) #21 C1orf52 (ENSBIXG00005006646) #22 SYDE2 (ENSBIXG00005028777) #23 DNAI3 (ENSBIXG00005028759) #24 ENSBIXG00005028687 MCOLN3 (ENSBIXG00005028662) #25 MCOLN2 (ENSBIXG00005028583) ##25 LPAR3 (ENSBIXG00005028548) SSX2IP (ENSBIXG00005028521) CTBS (ENSBIXG00005028483) SPATA1 (ENSBIXG00005028480) ENSBIXG00005028437 ENSBIXG00005004893 RPF1 (ENSBIXG00005028403) ENSBIXG00005028353 DNASE2B (ENSBIXG00005004867) ENSBIXG00005028288 Cow MODERN SPECIES 22 HS2ST1 (ENSBTAG00000017595) #7 SELENOF (ENSBTAG00000052268) #8 SH3GLB1 (ENSBTAG00000031171) #9 ENSBTAG00000051311 ENSBTAG00000021501 #10 CLCA3 (ENSBTAG00000016712) #11 CLCA4 (ENSBTAG00000017357) #12 CLCA1 (ENSBTAG00000008161) #13 CLCA2 (ENSBTAG00000038215) #14 ODF2L (ENSBTAG00000012907) #15 ENSBTAG00000048312 #16 ZNHIT6 (ENSBTAG00000021051) #18 CCN1 (ENSBTAG00000009844) #19 DDAH1 (ENSBTAG00000034776) #20 BCL10 (ENSBTAG00000013851) #21 C3H1orf52 (ENSBTAG00000016326) #22 SYDE2 (ENSBTAG00000003444) #23 DNAI3 (ENSBTAG00000013778) #24 MCOLN3 (ENSBTAG00000016982) #25 MCOLN2 (ENSBTAG00000046773) ##25 LPAR3 (ENSBTAG00000003791) SSX2IP (ENSBTAG00000018942) CTBS (ENSBTAG00000005782) SPATA1 (ENSBTAG00000020010) GNG5 (ENSBTAG00000008122) RPF1 (ENSBTAG00000008118) UOX (ENSBTAG00000024255) DNASE2B (ENSBTAG00000010445) ENSBTAG00000053100 SAMD13 (ENSBTAG00000053482) SAMD13 (ENSBTAG00000007724) American bison MODERN SPECIES 3325 HS2ST1 (ENSBBBG00000006101) #7 SELENOF (ENSBBBG00000008413) #8 SH3GLB1 (ENSBBBG00000007287) #9 ENSBBBG00000023469 #10 ENSBBBG00000008313 #11 CLCA4 (ENSBBBG00000023614) #12 CLCA1 (ENSBBBG00000006178) #13 CLCA2 (ENSBBBG00000023667) #14 ODF2L (ENSBBBG00000023750) #15 COL24A1 (ENSBBBG00000007290) #16 ZNHIT6 (ENSBBBG00000006216) #18 CCN1 (ENSBBBG00000023910) #19 ENSBBBG00000023925 DDAH1 (ENSBBBG00000023962) #20 BCL10 (ENSBBBG00000023973) #21 C1orf52 (ENSBBBG00000023979) #22 SYDE2 (ENSBBBG00000008975) #23 DNAI3 (ENSBBBG00000024063) #24 MCOLN3 (ENSBBBG00000024117) #25 MCOLN2 (ENSBBBG00000024164) ##25 LPAR3 (ENSBBBG00000024176) SSX2IP (ENSBBBG00000008990) CTBS (ENSBBBG00000024262) SPATA1 (ENSBBBG00000024290) ENSBBBG00000024302 RPF1 (ENSBBBG00000008889) DNASE2B (ENSBBBG00000006341) ENSBBBG00000006366 SAMD13 (ENSBBBG00000024450) ENSBBBG00000024455 PRKACB (ENSBBBG00000024703) Caprinae ANCESTRAL SPECIES 2 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.a #10 ENSGT00940000157555.b #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT01000000215412 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00910000147804 ENSGT00530000063936.b Goat DUPLICATION Goat MODERN SPECIES 22 ENSCHIG00000018965 SH3GLB1 (ENSCHIG00000026662) #9 ENSCHIG00000007867 #10 ENSCHIG00000002248 #11 CLCA4 (ENSCHIG00000021877) #12 CLCA1 (ENSCHIG00000011719) #13 CLCA2 (ENSCHIG00000027130) #14 ODF2L (ENSCHIG00000025854) #15 ENSCHIG00000017228 COL24A1 (ENSCHIG00000020640) #16 ZNHIT6 (ENSCHIG00000020100) #18 CCN1 (ENSCHIG00000027269) #19 ENSCHIG00000011990 DDAH1 (ENSCHIG00000024596) #20 BCL10 (ENSCHIG00000011561) #21 ENSCHIG00000026751 #22 SYDE2 (ENSCHIG00000014781) #23 DNAI3 (ENSCHIG00000017079) #24 MCOLN3 (ENSCHIG00000018773) #25 MCOLN2 (ENSCHIG00000008729) ##25 LPAR3 (ENSCHIG00000017316) SSX2IP (ENSCHIG00000025764) CTBS (ENSCHIG00000022826) SPATA1 (ENSCHIG00000004028) GNG5 (ENSCHIG00000016183) ENSCHIG00000012566 DNASE2B (ENSCHIG00000018531) ENSCHIG00000025541 ENSCHIG00000014514 PRKACB (ENSCHIG00000024391) TTLL7 (ENSCHIG00000017102) Goat MODERN SPECIES 22 ENSCHIG00000009426 ENSCHIG00000016560 ENSCHIG00000010218 CD1D (ENSCHIG00000008779) ENSCHIG00000012337 KIRREL1 (ENSCHIG00000021405) ENSCHIG00000027085 ENSCHIG00000015324 ENSCHIG00000014091 ENSCHIG00000019069 FCRL4 (ENSCHIG00000001070) ENSCHIG00000025439 ENSCHIG00000011451 ETV3 (ENSCHIG00000017949) ENSCHIG00000023056 ENSCHIG00000009592 #22 ARHGEF11 (ENSCHIG00000025394) LRRC71 (ENSCHIG00000005840) PEAR1 (ENSCHIG00000024120) NTRK1 (ENSCHIG00000023266) INSRR (ENSCHIG00000020115) SH2D2A (ENSCHIG00000019998) PRCC (ENSCHIG00000024652) HDGF (ENSCHIG00000017076) MRPL24 (ENSCHIG00000015041) METTL25B (ENSCHIG00000022856) ISG20L2 (ENSCHIG00000024024) CRABP2 (ENSCHIG00000009097) NES (ENSCHIG00000026388) BCAN (ENSCHIG00000011650) HAPLN2 (ENSCHIG00000025407) Rambouillet Sheep MODERN SPECIES ENSOARG00020006050 HS2ST1 (ENSOARG00020005954) #7 SELENOF (ENSOARG00020005902) #8 SH3GLB1 (ENSOARG00020005783) #9 ENSOARG00020003537 #10 ENSOARG00020002384 #11 CLCA4 (ENSOARG00020002227) #12 CLCA1 (ENSOARG00020002201) #13 CLCA2 (ENSOARG00020002169) #14 ODF2L (ENSOARG00020002095) #15 COL24A1 (ENSOARG00020002041) #16 CCN1 (ENSOARG00020001971) #19 DDAH1 (ENSOARG00020001916) #20 ENSOARG00020001899 BCL10 (ENSOARG00020001886) #21 C1orf52 (ENSOARG00020001875) #22 SYDE2 (ENSOARG00020001859) #23 DNAI3 (ENSOARG00020001533) #24 ENSOARG00020001462 MCOLN3 (ENSOARG00020001362) #25 MCOLN2 (ENSOARG00020001324) ##25 LPAR3 (ENSOARG00020001315) SSX2IP (ENSOARG00020001297) CTBS (ENSOARG00020001255) SPATA1 (ENSOARG00020001225) GNG5 (ENSOARG00020001205) RPF1 (ENSOARG00020001191) DNASE2B (ENSOARG00020001163) ENSOARG00020001133 ENSOARG00020001115 SAMD13 (ENSOARG00020001103) Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 339 HS2ST1 (ENSMMSG00000004654) #7 SELENOF (ENSMMSG00000004702) #8 SH3GLB1 (ENSMMSG00000004787) #9 ENSMMSG00000005173 #10 ENSMMSG00000005817 #11 CLCA4 (ENSMMSG00000006195) #12 CLCA1 (ENSMMSG00000006239) #13 CLCA2 (ENSMMSG00000006290) #14 ODF2L (ENSMMSG00000006331) #15 COL24A1 (ENSMMSG00000006437) #16 ZNHIT6 (ENSMMSG00000006731) #18 CCN1 (ENSMMSG00000006870) #19 ENSMMSG00000006904 DDAH1 (ENSMMSG00000006918) #20 BCL10 (ENSMMSG00000006944) #21 C1orf52 (ENSMMSG00000006971) #22 SYDE2 (ENSMMSG00000006993) #23 DNAI3 (ENSMMSG00000007042) #24 MCOLN3 (ENSMMSG00000007252) #25 MCOLN2 (ENSMMSG00000007452) ##25 LPAR3 (ENSMMSG00000007558) SSX2IP (ENSMMSG00000007576) CTBS (ENSMMSG00000007643) ENSMMSG00000007667 ENSMMSG00000007684 ENSMMSG00000007703 DNASE2B (ENSMMSG00000007733) ENSMMSG00000007774 ENSMMSG00000007862 SAMD13 (ENSMMSG00000007874) PRKACB (ENSMMSG00000007994) Siberian musk deer MODERN SPECIES 243 ENSMMSG00000010912 ENSMMSG00000010903 ENSMMSG00000010889 #22 SRBD1 (ENSMMSG00000010782) PRKCE (ENSMMSG00000010644) ENSMMSG00000010613 EPAS1 (ENSMMSG00000010543) TMEM247 (ENSMMSG00000010509) ATP6V1E2 (ENSMMSG00000010493) RHOQ (ENSMMSG00000010463) PIGF (ENSMMSG00000010411) CRIPT (ENSMMSG00000010380) SOCS5 (ENSMMSG00000010366) ENSMMSG00000010348 MCFD2 (ENSMMSG00000010275) TTC7A (ENSMMSG00000010218) STPG4 (ENSMMSG00000010164) CALM2 (ENSMMSG00000010115) Yarkand deer MODERN SPECIES 12 ENSCHYG00000017416 ENSCHYG00000017521 #11 ENSCHYG00000017942 #10 CLCA4 (ENSCHYG00000017997) #12 ENSCHYG00000018086 CLCA1 (ENSCHYG00000018130) #13 CLCA2 (ENSCHYG00000018274) #14 ODF2L (ENSCHYG00000018506) #15 COL24A1 (ENSCHYG00000019031) #16 ZNHIT6 (ENSCHYG00000019277) #18 CCN1 (ENSCHYG00000019490) #19 ENSCHYG00000019543 ENSCHYG00000019567 DDAH1 (ENSCHYG00000019587) #20 BCL10 (ENSCHYG00000019711) #21 C1orf52 (ENSCHYG00000019772) #22 SYDE2 (ENSCHYG00000019844) #23 DNAI3 (ENSCHYG00000019958) #24 MCOLN3 (ENSCHYG00000021236) #25 MCOLN2 (ENSCHYG00000021424) ##25 LPAR3 (ENSCHYG00000021602) ENSCHYG00000021637 CTBS (ENSCHYG00000021813) SPATA1 (ENSCHYG00000021860) ENSCHYG00000022011 RPF1 (ENSCHYG00000022044) DNASE2B (ENSCHYG00000022151) ENSCHYG00000022258 ENSCHYG00000022387 PRKACB (ENSCHYG00000022683) ENSCHYG00000024821 Cetacea ANCESTRAL SPECIES ENSGT00500000046198 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00950000186157 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Odontoceti ANCESTRAL SPECIES ENSGT00500000046198 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00950000186157 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Odontoceti_a ANCESTRAL SPECIES ENSGT00500000046198 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000010089.e.a ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 ENSGT00940000159078 Dolphin MODERN SPECIES 1393 ZNHIT6 (ENSTTRG00000001331) #18 CYR61 (ENSTTRG00000001330) #19 DDAH1 (ENSTTRG00000001329) #20 BCL10 (ENSTTRG00000001328) #21 CUNH1orf52 (ENSTTRG00000001327) #22 SYDE2 (ENSTTRG00000001326) #23 DNAI3 (ENSTTRG00000001325) #24 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000154276.jb.a.c.a.b ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT01100000263605.b.a ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 ENSGT00940000159078 ENSGT01030000235287 Vaquita MODERN SPECIES SH3GLB1 (ENSPSNG00000012379) #9 ENSPSNG00000012254 ENSPSNG00000012179 #11 ENSPSNG00000012108 CLCA4 (ENSPSNG00000011942) #12 CLCA1 (ENSPSNG00000011200) #13 CLCA2 (ENSPSNG00000010949) #14 ODF2L (ENSPSNG00000010772) #15 ENSPSNG00000010684 ENSPSNG00000010645 COL24A1 (ENSPSNG00000010075) #16 ZNHIT6 (ENSPSNG00000009894) #18 CCN1 (ENSPSNG00000009783) #19 DDAH1 (ENSPSNG00000004030) #20 BCL10 (ENSPSNG00000004004) #21 C1orf52 (ENSPSNG00000003984) #22 SYDE2 (ENSPSNG00000003962) #23 DNAI3 (ENSPSNG00000003943) #24 MCOLN3 (ENSPSNG00000003890) #25 MCOLN2 (ENSPSNG00000003843) ##25 LPAR3 (ENSPSNG00000003830) SSX2IP (ENSPSNG00000003809) GNG5 (ENSPSNG00000003794) RPF1 (ENSPSNG00000003772) ENSPSNG00000003753 ENSPSNG00000003738 SAMD13 (ENSPSNG00000003722) PRKACB (ENSPSNG00000003284) TTLL7 (ENSPSNG00000003000) ENSPSNG00000002961 ADGRL2 (ENSPSNG00000002844) Monodontidae ANCESTRAL SPECIES ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000154276.jb.a.c.a.b ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT01100000263605.b.a ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000010089.e.a ENSGT00910000145621 ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 ENSGT00940000159078 Beluga whale MODERN SPECIES 74 ENSDLEG00000017239 SELENOF (ENSDLEG00000017224) #8 SH3GLB1 (ENSDLEG00000017190) #9 ENSDLEG00000017178 #11 ENSDLEG00000017169 CLCA4 (ENSDLEG00000017123) #12 CLCA1 (ENSDLEG00000016981) #13 CLCA2 (ENSDLEG00000016914) #14 ODF2L (ENSDLEG00000016888) #15 ENSDLEG00000016875 ENSDLEG00000016857 #16 ZNHIT6 (ENSDLEG00000016847) #18 CYR61 (ENSDLEG00000016833) #19 DDAH1 (ENSDLEG00000016798) #20 BCL10 (ENSDLEG00000016793) #21 CUNH1orf52 (ENSDLEG00000016784) #22 SYDE2 (ENSDLEG00000016765) #23 DNAI3 (ENSDLEG00000016672) #24 MCOLN3 (ENSDLEG00000016634) #25 MCOLN2 (ENSDLEG00000016543) ##25 LPAR3 (ENSDLEG00000016529) SSX2IP (ENSDLEG00000016495) ENSDLEG00000016476 ENSDLEG00000016469 RPF1 (ENSDLEG00000016438) DNASE2B (ENSDLEG00000016427) ENSDLEG00000016414 SAMD13 (ENSDLEG00000016382) PRKACB (ENSDLEG00000016303) TTLL7 (ENSDLEG00000016218) ENSDLEG00000016193 Narwhal MODERN SPECIES 304 ENSMMNG00015006184 #11 ENSMMNG00015006203 CLCA4 (ENSMMNG00015006219) #12 CLCA1 (ENSMMNG00015006324) #13 CLCA2 (ENSMMNG00015006483) #14 ODF2L (ENSMMNG00015006542) #15 ENSMMNG00015006593 COL24A1 (ENSMMNG00015006630) #16 ENSMMNG00015006664 ZNHIT6 (ENSMMNG00015006688) #18 CCN1 (ENSMMNG00015006718) #19 ENSMMNG00015006737 ENSMMNG00015006746 DDAH1 (ENSMMNG00015006769) #20 BCL10 (ENSMMNG00015006803) #21 C1orf52 (ENSMMNG00015006824) #22 SYDE2 (ENSMMNG00015006844) #23 DNAI3 (ENSMMNG00015006897) #24 MCOLN3 (ENSMMNG00015006977) #25 MCOLN2 (ENSMMNG00015007034) ##25 LPAR3 (ENSMMNG00015007073) SSX2IP (ENSMMNG00015007092) ENSMMNG00015007123 ENSMMNG00015007171 RPF1 (ENSMMNG00015007188) DNASE2B (ENSMMNG00015007213) ENSMMNG00015007239 SAMD13 (ENSMMNG00015007257) ENSMMNG00015007272 PRKACB (ENSMMNG00015007361) TTLL7 (ENSMMNG00015007554) Sperm whale MODERN SPECIES 15 LMO4 (ENSPCTG00005009288) HS2ST1 (ENSPCTG00005009338) #7 SELENOF (ENSPCTG00005009387) #8 SH3GLB1 (ENSPCTG00005009480) #9 ENSPCTG00005009928 #11 ENSPCTG00005009991 #11 CLCA4 (ENSPCTG00005010077) #12 CLCA1 (ENSPCTG00005010226) #13 CLCA2 (ENSPCTG00005010389) #14 ODF2L (ENSPCTG00005010473) #15 COL24A1 (ENSPCTG00005010594) #16 ENSPCTG00005010695 ZNHIT6 (ENSPCTG00005010735) #18 CCN1 (ENSPCTG00005010887) #19 BCL10 (ENSPCTG00005010972) #21 C4H1orf52 (ENSPCTG00005011208) #22 SYDE2 (ENSPCTG00005011255) #23 DNAI3 (ENSPCTG00005011337) #24 MCOLN3 (ENSPCTG00005011843) #25 MCOLN2 (ENSPCTG00005012138) ##25 LPAR3 (ENSPCTG00005012306) SSX2IP (ENSPCTG00005012325) ENSPCTG00005012379 ENSPCTG00005012400 ENSPCTG00005012437 GNG5 (ENSPCTG00005012478) RPF1 (ENSPCTG00005012513) ENSPCTG00005012591 ENSPCTG00005012636 SAMD13 (ENSPCTG00005012711) PRKACB (ENSPCTG00005012881) Blue whale MODERN SPECIES ENSBMSG00010011649 ENSBMSG00010011641 #11 ENSBMSG00010011631 #11 ENSBMSG00010011618 #12 ENSBMSG00010011578 #12 CLCA1 (ENSBMSG00010011556) #13 CLCA2 (ENSBMSG00010011495) #14 ODF2L (ENSBMSG00010011443) #15 ENSBMSG00010011419 COL24A1 (ENSBMSG00010011347) #16 ZNHIT6 (ENSBMSG00010011279) #18 CCN1 (ENSBMSG00010011251) #19 ENSBMSG00010011239 DDAH1 (ENSBMSG00010011208) #20 ENSBMSG00010011187 #21 C1orf52 (ENSBMSG00010011167) #22 SYDE2 (ENSBMSG00010011151) #23 DNAI3 (ENSBMSG00010011066) #24 MCOLN3 (ENSBMSG00010011002) #25 MCOLN2 (ENSBMSG00010010954) ##25 ENSBMSG00010010924 LPAR3 (ENSBMSG00010010913) SSX2IP (ENSBMSG00010010888) ENSBMSG00010010877 SPATA1 (ENSBMSG00010010864) ENSBMSG00010010850 RPF1 (ENSBMSG00010010838) ENSBMSG00010010830 ENSBMSG00010010810 ENSBMSG00010010794 SAMD13 (ENSBMSG00010010774) Camelidae ANCESTRAL SPECIES 11 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.d ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b Arabian camel MODERN SPECIES 4 PKN2 (ENSCDRG00005014192) LMO4 (ENSCDRG00005014134) HS2ST1 (ENSCDRG00005014055) #7 SELENOF (ENSCDRG00005013974) #8 SH3GLB1 (ENSCDRG00005013701) #9 ENSCDRG00005013259 #11 CLCA4 (ENSCDRG00005013128) #12 CLCA1 (ENSCDRG00005012990) #13 CLCA2 (ENSCDRG00005012881) #14 ODF2L (ENSCDRG00005012713) #15 COL24A1 (ENSCDRG00005012526) #16 ZNHIT6 (ENSCDRG00005012303) #18 CCN1 (ENSCDRG00005012224) #19 DDAH1 (ENSCDRG00005011995) #20 BCL10 (ENSCDRG00005011941) #21 C1orf52 (ENSCDRG00005011873) #22 SYDE2 (ENSCDRG00005011826) #23 DNAI3 (ENSCDRG00005011768) #24 MCOLN3 (ENSCDRG00005011428) #25 MCOLN2 (ENSCDRG00005011158) ##25 LPAR3 (ENSCDRG00005011117) SSX2IP (ENSCDRG00005011054) CTBS (ENSCDRG00005011010) SPATA1 (ENSCDRG00005010904) GNG5 (ENSCDRG00005010830) RPF1 (ENSCDRG00005010749) DNASE2B (ENSCDRG00005010674) ENSCDRG00005010589 ENSCDRG00005010571 SAMD13 (ENSCDRG00005010489) ENSCDRG00005010452 Suina ANCESTRAL SPECIES 32 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 Pig MODERN SPECIES 12 ENSSSCG00000047605 HS2ST1 (ENSSSCG00000022032) #7 SELENOF (ENSSSCG00000030125) #8 SH3GLB1 (ENSSSCG00000006930) #9 ENSSSCG00000059930 #12 ENSSSCG00000006932 #12 CLCA1 (ENSSSCG00000006933) #13 CLCA2 (ENSSSCG00000006935) #14 ODF2L (ENSSSCG00000006936) #15 COL24A1 (ENSSSCG00000031738) #16 ZNHIT6 (ENSSSCG00000006939) #18 CCN1 (ENSSSCG00000006940) #19 ENSSSCG00000056532 DDAH1 (ENSSSCG00000040735) #20 BCL10 (ENSSSCG00000025691) #21 C1orf52 (ENSSSCG00000026772) #22 SYDE2 (ENSSSCG00000006947) #23 DNAI3 (ENSSSCG00000006950) #24 MCOLN3 (ENSSSCG00000023745) #25 Chacoan peccary MODERN SPECIES 216 PKN2 (ENSCWAG00000014683) ENSCWAG00000014846 HS2ST1 (ENSCWAG00000014885) #7 SELENOF (ENSCWAG00000014949) #8 SH3GLB1 (ENSCWAG00000015014) #9 ENSCWAG00000015195 #12 ENSCWAG00000015913 #12 CLCA1 (ENSCWAG00000016019) #13 CLCA2 (ENSCWAG00000016125) #14 ODF2L (ENSCWAG00000016227) #15 COL24A1 (ENSCWAG00000016291) #16 ZNHIT6 (ENSCWAG00000016707) #18 CCN1 (ENSCWAG00000016845) #19 DDAH1 (ENSCWAG00000016873) #20 BCL10 (ENSCWAG00000016929) #21 C1orf52 (ENSCWAG00000016957) #22 SYDE2 (ENSCWAG00000016990) #23 DNAI3 (ENSCWAG00000017052) #24 PCDH20 (ENSCWAG00000017337) TDRD3 (ENSCWAG00000017371) ENSCWAG00000017495 DIAPH3 (ENSCWAG00000017632) ENSCWAG00000019391 ENSCWAG00000019419 PCDH17 (ENSCWAG00000019432) ENSCWAG00000019461 ENSCWAG00000019477 ENSCWAG00000019495 OLFM4 (ENSCWAG00000019527) ENSCWAG00000019571 PCDH8 (ENSCWAG00000000054) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00940000163788 ENSGT00530000063936.b Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00940000163788 ENSGT00530000063936.b Equus ANCESTRAL SPECIES 3 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416.j #12 ENSGT00940000160416.i.b #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00940000161169 ENSGT00940000159078 Donkey MODERN SPECIES 7 SH3GLB1 (ENSEASG00005013235) #9 ENSEASG00005013238 #11 ENSEASG00005013293 #12 ENSEASG00005014000 #12 ENSEASG00005032323 #12 ENSEASG00005013994 #12 CLCA1 (ENSEASG00005014026) #13 CLCA2 (ENSEASG00005014061) #14 ODF2L (ENSEASG00005014068) #15 COL24A1 (ENSEASG00005024938) #16 ZNHIT6 (ENSEASG00005014084) #18 CCN1 (ENSEASG00005014085) #19 ENSEASG00005034815 DDAH1 (ENSEASG00005014087) #20 BCL10 (ENSEASG00005014089) #21 C1orf52 (ENSEASG00005014090) #22 SYDE2 (ENSEASG00005023929) #23 DNAI3 (ENSEASG00005014094) #24 MCOLN3 (ENSEASG00005014101) #25 MCOLN2 (ENSEASG00005014110) ##25 LPAR3 (ENSEASG00005014129) SSX2IP (ENSEASG00005014134) CTBS (ENSEASG00005014138) SPATA1 (ENSEASG00005014155) ENSEASG00005033635 RPF1 (ENSEASG00005014158) ENSEASG00005014161 DNASE2B (ENSEASG00005014162) ENSEASG00005024895 PRKACB (ENSEASG00005014168) TTLL7 (ENSEASG00005014170) Horse MODERN SPECIES 26 ENSECAG00000052391 LMO4 (ENSECAG00000025150) HS2ST1 (ENSECAG00000000800) #7 SH3GLB1 (ENSECAG00000009160) #9 ENSECAG00000014656 #11 ENSECAG00000017843 #12 ENSECAG00000035060 #12 CLCA1 (ENSECAG00000057201) #13 CLCA2 (ENSECAG00000020901) #14 ODF2L (ENSECAG00000022058) #15 COL24A1 (ENSECAG00000023199) #16 ZNHIT6 (ENSECAG00000024978) #18 CCN1 (ENSECAG00000024993) #19 DDAH1 (ENSECAG00000024997) #20 BCL10 (ENSECAG00000025005) #21 C5H1orf52 (ENSECAG00000025029) #22 SYDE2 (ENSECAG00000025133) #23 DNAI3 (ENSECAG00000000764) #24 MCOLN3 (ENSECAG00000007249) #25 MCOLN2 (ENSECAG00000011008) ##25 LPAR3 (ENSECAG00000049816) SSX2IP (ENSECAG00000012872) ENSECAG00000048925 ENSECAG00000056260 CTBS (ENSECAG00000015643) SPATA1 (ENSECAG00000016351) GNG5 (ENSECAG00000048494) RPF1 (ENSECAG00000019661) UOX (ENSECAG00000021582) DNASE2B (ENSECAG00000020335) ENSECAG00000028442 Chiroptera ANCESTRAL SPECIES ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00940000163788 ENSGT00530000063936.b Megabat MODERN SPECIES 1749 CCN1 (ENSPVAG00000002811) #19 DDAH1 (ENSPVAG00000002809) #20 BCL10 (ENSPVAG00000002808) #21 C1orf52 (ENSPVAG00000002806) #22 Microchiroptera ANCESTRAL SPECIES 1 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00940000163788 ENSGT00530000063936.b Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 11 IQSEC1 (ENSRFEG00010004769) ENSRFEG00010004850 NUP210 (ENSRFEG00010004861) ENSRFEG00010004889 ENSRFEG00010004894 FBLN2 (ENSRFEG00010004908) WNT7A (ENSRFEG00010004927) GK5 (ENSRFEG00010004962) XRN1 (ENSRFEG00010004992) ATR (ENSRFEG00010005072) PLS1 (ENSRFEG00010005106) TRPC1 (ENSRFEG00010005127) PCOLCE2 (ENSRFEG00010005148) PAQR9 (ENSRFEG00010005166) U2SURP (ENSRFEG00010005180) ENSRFEG00010005199 #22 CHST2 (ENSRFEG00010005206) SLC9A9 (ENSRFEG00010005221) DIPK2A (ENSRFEG00010005250) ENSRFEG00010005260 PLOD2 (ENSRFEG00010005288) PLSCR4 (ENSRFEG00010005346) ENSRFEG00010005376 PLSCR1 (ENSRFEG00010005408) PLSCR5 (ENSRFEG00010005460) ZIC4 (ENSRFEG00010005534) ZIC1 (ENSRFEG00010005593) ENSRFEG00010005605 AGTR1 (ENSRFEG00010005628) CPB1 (ENSRFEG00010005647) CPA3 (ENSRFEG00010005703) Greater horseshoe bat MODERN SPECIES 27 LMO4 (ENSRFEG00010011036) HS2ST1 (ENSRFEG00010010982) #7 SELENOF (ENSRFEG00010010937) #8 SH3GLB1 (ENSRFEG00010010748) #9 ENSRFEG00010010677 #11 CLCA4 (ENSRFEG00010010608) #12 CLCA1 (ENSRFEG00010010535) #13 CLCA2 (ENSRFEG00010010308) #14 ODF2L (ENSRFEG00010010033) #15 ENSRFEG00010009977 COL24A1 (ENSRFEG00010009929) #16 ZNHIT6 (ENSRFEG00010009748) #18 CCN1 (ENSRFEG00010009708) #19 DDAH1 (ENSRFEG00010009596) #20 BCL10 (ENSRFEG00010009517) #21 ENSRFEG00010009469 #22 SYDE2 (ENSRFEG00010009428) #23 DNAI3 (ENSRFEG00010009062) #24 MCOLN3 (ENSRFEG00010008879) #25 MCOLN2 (ENSRFEG00010008712) ##25 LPAR3 (ENSRFEG00010008696) SSX2IP (ENSRFEG00010008650) ENSRFEG00010008577 ENSRFEG00010008537 SPATA1 (ENSRFEG00010008499) GNG5 (ENSRFEG00010008455) ENSRFEG00010008327 DNASE2B (ENSRFEG00010008256) ENSRFEG00010008224 ENSRFEG00010008199 ENSRFEG00010008163 Carnivora ANCESTRAL SPECIES 1 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Felidae ANCESTRAL SPECIES 10 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b.c ENSGT00990000205119 Panthera ANCESTRAL SPECIES 4 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b.c ENSGT00990000205119 Panthera_a ANCESTRAL SPECIES 11 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b.c ENSGT00990000205119 lion MODERN SPECIES 8 HS2ST1 (ENSPLOG00000008504) #7 H2AZ1 (ENSPLOG00000008536) SELENOF (ENSPLOG00000008569) #8 SH3GLB1 (ENSPLOG00000008636) #9 ENSPLOG00000008847 #11 CLCA4 (ENSPLOG00000009130) #12 CLCA1 (ENSPLOG00000009243) #13 CLCA2 (ENSPLOG00000009343) #14 ODF2L (ENSPLOG00000009448) #15 COL24A1 (ENSPLOG00000009722) #16 ZNHIT6 (ENSPLOG00000009990) #18 CCN1 (ENSPLOG00000010073) #19 ENSPLOG00000010159 DDAH1 (ENSPLOG00000010185) #20 BCL10 (ENSPLOG00000010271) #21 C1orf52 (ENSPLOG00000010306) #22 SYDE2 (ENSPLOG00000010350) #23 DNAI3 (ENSPLOG00000010446) #24 ENSPLOG00000010679 MCOLN3 (ENSPLOG00000010724) #25 MCOLN2 (ENSPLOG00000010836) ##25 LPAR3 (ENSPLOG00000010887) SSX2IP (ENSPLOG00000005570) CTBS (ENSPLOG00000005615) SPATA1 (ENSPLOG00000005659) GNG5 (ENSPLOG00000005675) RPF1 (ENSPLOG00000005694) DNASE2B (ENSPLOG00000005726) ENSPLOG00000005767 SAMD13 (ENSPLOG00000005808) ENSPLOG00000005835 leopard MODERN SPECIES 62 HS2ST1 (ENSPPRG00000001594) #7 SELENOF (ENSPPRG00000003036) #8 SH3GLB1 (ENSPPRG00000005342) #9 ENSPPRG00000008796 #11 CLCA4 (ENSPPRG00000010047) #12 CLCA1 (ENSPPRG00000010379) #13 CLCA2 (ENSPPRG00000016194) #14 ODF2L (ENSPPRG00000024565) #15 ENSPPRG00000024439 COL24A1 (ENSPPRG00000024037) #16 ZNHIT6 (ENSPPRG00000023340) #18 CCN1 (ENSPPRG00000023322) #19 ENSPPRG00000021077 DDAH1 (ENSPPRG00000000442) #20 BCL10 (ENSPPRG00000000878) #21 C1orf52 (ENSPPRG00000001522) #22 SYDE2 (ENSPPRG00000002218) #23 DNAI3 (ENSPPRG00000004873) #24 MCOLN3 (ENSPPRG00000006193) #25 MCOLN2 (ENSPPRG00000006914) ##25 LPAR3 (ENSPPRG00000006969) SSX2IP (ENSPPRG00000008492) ENSPPRG00000008708 CTBS (ENSPPRG00000008795) SPATA1 (ENSPPRG00000009258) GNG5 (ENSPPRG00000009563) RPF1 (ENSPPRG00000009777) ENSPPRG00000009883 ENSPPRG00000010218 ENSPPRG00000010285 ENSPPRG00000010565 Tiger MODERN SPECIES 126 HS2ST1 (ENSPTIG00000010901) #7 SELENOF (ENSPTIG00000011115) #8 SH3GLB1 (ENSPTIG00000011684) #9 ENSPTIG00000012017 #11 ENSPTIG00000012116 CLCA4 (ENSPTIG00000012168) #12 CLCA1 (ENSPTIG00000012542) #13 CLCA2 (ENSPTIG00000012779) #14 ODF2L (ENSPTIG00000013135) #15 COL24A1 (ENSPTIG00000013808) #16 ZNHIT6 (ENSPTIG00000014171) #18 CCN1 (ENSPTIG00000014498) #19 ENSPTIG00000010331 DDAH1 (ENSPTIG00000014695) #20 BCL10 (ENSPTIG00000015138) #21 C1orf52 (ENSPTIG00000015690) #22 SYDE2 (ENSPTIG00000015910) #23 DNAI3 (ENSPTIG00000016214) #24 MCOLN3 (ENSPTIG00000016693) #25 MCOLN2 (ENSPTIG00000017601) ##25 LPAR3 (ENSPTIG00000017836) SSX2IP (ENSPTIG00000017936) CTBS (ENSPTIG00000018263) SPATA1 (ENSPTIG00000019012) GNG5 (ENSPTIG00000019098) RPF1 (ENSPTIG00000019164) DNASE2B (ENSPTIG00000019401) ENSPTIG00000019546 SAMD13 (ENSPTIG00000019707) ENSPTIG00000019784 PRKACB (ENSPTIG00000020230) Cat MODERN SPECIES 239 LMO4 (ENSFCAG00000044371) HS2ST1 (ENSFCAG00000008006) #7 SELENOF (ENSFCAG00000005249) #8 SH3GLB1 (ENSFCAG00000028517) #9 ENSFCAG00000028907 #11 ENSFCAG00000030426 CLCA4 (ENSFCAG00000018343) #12 CLCA1 (ENSFCAG00000031867) #13 CLCA2 (ENSFCAG00000008210) #14 ODF2L (ENSFCAG00000019281) #15 COL24A1 (ENSFCAG00000033986) #16 ZNHIT6 (ENSFCAG00000027469) #18 CCN1 (ENSFCAG00000031965) #19 DDAH1 (ENSFCAG00000029407) #20 BCL10 (ENSFCAG00000036364) #21 CC1H1orf52 (ENSFCAG00000035401) #22 SYDE2 (ENSFCAG00000027468) #23 DNAI3 (ENSFCAG00000011197) #24 MCOLN3 (ENSFCAG00000011196) #25 MCOLN2 (ENSFCAG00000011193) ##25 LPAR3 (ENSFCAG00000008799) SSX2IP (ENSFCAG00000023838) CTBS (ENSFCAG00000046319) SPATA1 (ENSFCAG00000022598) GNG5 (ENSFCAG00000038836) RPF1 (ENSFCAG00000025546) DNASE2B (ENSFCAG00000008789) UOX (ENSFCAG00000024210) ENSFCAG00000050042 SAMD13 (ENSFCAG00000045569) ENSFCAG00000049478 Caniformia ANCESTRAL SPECIES 2 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Canidae ANCESTRAL SPECIES 18 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00950000183199.a.b.p ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804.a ENSGT00530000063936.b ENSGT00940000163788 Canis_lupus ANCESTRAL SPECIES 2 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00950000183199.a.b.p ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804.a ENSGT00530000063936.b ENSGT00940000163788 Dog MODERN SPECIES 34 CLCA4 (ENSCAFG00845020831) #12 CLCA1 (ENSCAFG00845020906) #13 CLCA2 (ENSCAFG00845021008) #14 ODF2L (ENSCAFG00845021153) #15 ENSCAFG00845021655 ENSCAFG00845021690 COL24A1 (ENSCAFG00845022035) #16 ENSCAFG00845024397 ENSCAFG00845024424 ZNHIT6 (ENSCAFG00845024485) #18 CCN1 (ENSCAFG00845024708) #19 ENSCAFG00845024791 ENSCAFG00845001033 DDAH1 (ENSCAFG00845001064) #20 BCL10 (ENSCAFG00845001105) #21 C6H1orf52 (ENSCAFG00845001130) #22 SYDE2 (ENSCAFG00845001161) #23 WDR63 (ENSCAFG00845001218) #24 MCOLN3 (ENSCAFG00845001310) #25 MCOLN2 (ENSCAFG00845001382) ##25 LPAR3 (ENSCAFG00845001428) ENSCAFG00845001445 SSX2IP (ENSCAFG00845001479) ENSCAFG00845001531 GNG5 (ENSCAFG00845001608) RPF1 (ENSCAFG00845001641) UOX (ENSCAFG00845001685) DNASE2B (ENSCAFG00845001747) ENSCAFG00845001765 ENSCAFG00845001788 PRKACB (ENSCAFG00845001925) Dingo MODERN SPECIES 172 ENSCAFG00020013754 SH3GLB1 (ENSCAFG00020013756) #9 ENSCAFG00020013760 #11 CLCA4 (ENSCAFG00020013813) #12 CLCA1 (ENSCAFG00020013898) #13 CLCA2 (ENSCAFG00020013957) #14 ODF2L (ENSCAFG00020013982) #15 ENSCAFG00020014075 ENSCAFG00020014085 ENSCAFG00020014087 #16 ZNHIT6 (ENSCAFG00020014100) #18 CCN1 (ENSCAFG00020014107) #19 ENSCAFG00020014109 DDAH1 (ENSCAFG00020014115) #20 BCL10 (ENSCAFG00020014121) #21 C1orf52 (ENSCAFG00020014126) #22 SYDE2 (ENSCAFG00020014128) #23 DNAI3 (ENSCAFG00020014165) #24 MCOLN3 (ENSCAFG00020014182) #25 MCOLN2 (ENSCAFG00020014195) ##25 LPAR3 (ENSCAFG00020014218) ENSCAFG00020014228 SSX2IP (ENSCAFG00020014235) CTBS (ENSCAFG00020014264) SPATA1 (ENSCAFG00020014283) GNG5 (ENSCAFG00020014293) ENSCAFG00020014296 DNASE2B (ENSCAFG00020014302) ENSCAFG00020014308 ENSCAFG00020014317 SAMD13 (ENSCAFG00020014319) Red fox MODERN SPECIES 50 SELENOF (ENSVVUG00000030159) #8 SH3GLB1 (ENSVVUG00000030155) #9 ENSVVUG00000030152 #11 CLCA4 (ENSVVUG00000030149) #12 CLCA1 (ENSVVUG00000030143) #13 CLCA2 (ENSVVUG00000030122) #14 ODF2L (ENSVVUG00000030120) #15 ENSVVUG00000030118 ENSVVUG00000030110 ENSVVUG00000030103 #16 ZNHIT6 (ENSVVUG00000030102) #18 CYR61 (ENSVVUG00000030100) #19 ENSVVUG00000030098 DDAH1 (ENSVVUG00000030097) #20 BCL10 (ENSVVUG00000030096) #21 C1orf52 (ENSVVUG00000030094) #22 SYDE2 (ENSVVUG00000030093) #23 WDR63 (ENSVVUG00000030090) #24 MCOLN3 (ENSVVUG00000030089) #25 MCOLN2 (ENSVVUG00000030088) ##25 LPAR3 (ENSVVUG00000030085) SSX2IP (ENSVVUG00000030083) CTBS (ENSVVUG00000030082) SPATA1 (ENSVVUG00000030078) ENSVVUG00000030076 DNASE2B (ENSVVUG00000030073) ENSVVUG00000030072 ENSVVUG00000030071 SAMD13 (ENSVVUG00000030070) ENSVVUG00000030069 PRKACB (ENSVVUG00000030067) Caniformia_b ANCESTRAL SPECIES 1 ENSGT00390000009268.y.a ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Ursidae ANCESTRAL SPECIES 32 ENSGT00390000009268.y.a ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b.i #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.d Ursus ANCESTRAL SPECIES 139 ENSGT00940000157730 ENSGT00390000009268.y.a ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b.i #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.d American black bear MODERN SPECIES 1481 DDAH1 (ENSUAMG00000019285) #20 BCL10 (ENSUAMG00000019286) #21 C1orf52 (ENSUAMG00000019287) #22 SYDE2 (ENSUAMG00000019288) #23 Polar bear MODERN SPECIES 170 LMO4 (ENSUMAG00000001651) ENSUMAG00000001654 HS2ST1 (ENSUMAG00000001671) #7 SELENOF (ENSUMAG00000001679) #8 SH3GLB1 (ENSUMAG00000001715) #9 ENSUMAG00000001751 #11 CLCA4 (ENSUMAG00000001934) #12 CLCA1 (ENSUMAG00000002319) #13 CLCA2 (ENSUMAG00000002415) #14 ODF2L (ENSUMAG00000002451) #15 ENSUMAG00000002474 #16 ZNHIT6 (ENSUMAG00000002478) #18 CCN1 (ENSUMAG00000002488) #19 DDAH1 (ENSUMAG00000002499) #20 BCL10 (ENSUMAG00000002502) #21 C1orf52 (ENSUMAG00000002504) #22 SYDE2 (ENSUMAG00000002509) #23 DNAI3 (ENSUMAG00000002541) #24 MCOLN3 (ENSUMAG00000002560) #25 MCOLN2 (ENSUMAG00000002572) ##25 LPAR3 (ENSUMAG00000002579) SSX2IP (ENSUMAG00000002601) CTBS (ENSUMAG00000002608) SPATA1 (ENSUMAG00000002623) ENSUMAG00000002631 RPF1 (ENSUMAG00000002636) DNASE2B (ENSUMAG00000002646) ENSUMAG00000002660 SAMD13 (ENSUMAG00000002672) ENSUMAG00000002678 ENSUMAG00000002683 Giant Panda MODERN SPECIES 11 ENSAMEG00000020192 HS2ST1 (ENSAMEG00000016204) #7 SELENOF (ENSAMEG00000027639) #8 SH3GLB1 (ENSAMEG00000016222) #9 ENSAMEG00000015592 #11 CLCA4 (ENSAMEG00000017158) #12 CLCA1 (ENSAMEG00000017170) #13 CLCA2 (ENSAMEG00000017197) #14 ODF2L (ENSAMEG00000017198) #15 COL24A1 (ENSAMEG00000017218) #16 ZNHIT6 (ENSAMEG00000017224) #18 CCN1 (ENSAMEG00000017235) #19 ENSAMEG00000023476 DDAH1 (ENSAMEG00000017246) #20 BCL10 (ENSAMEG00000026623) #21 C1orf52 (ENSAMEG00000023530) #22 SYDE2 (ENSAMEG00000017261) #23 DNAI3 (ENSAMEG00000017265) #24 MCOLN3 (ENSAMEG00000017280) #25 MCOLN2 (ENSAMEG00000017295) ##25 SSX2IP (ENSAMEG00000006467) CTBS (ENSAMEG00000000372) SPATA1 (ENSAMEG00000000388) ENSAMEG00000029878 RPF1 (ENSAMEG00000008531) DNASE2B (ENSAMEG00000013581) ENSAMEG00000013543 ENSAMEG00000031257 SAMD13 (ENSAMEG00000026469) PRKACB (ENSAMEG00000013506) TTLL7 (ENSAMEG00000014783) Mustelinae ANCESTRAL SPECIES 60 ENSGT00390000009268.y.a ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00940000163788 ENSGT00530000063936.b Ferret MODERN SPECIES 197 GTF2B (ENSMPUG00000004799) PKN2 (ENSMPUG00000004804) ENSMPUG00000004816 LMO4 (ENSMPUG00000004821) HS2ST1 (ENSMPUG00000004829) #7 SH3GLB1 (ENSMPUG00000004832) #9 ENSMPUG00000004938 #11 CLCA4 (ENSMPUG00000005112) #12 CLCA1 (ENSMPUG00000005181) #13 ODF2L (ENSMPUG00000005220) #15 COL24A1 (ENSMPUG00000005229) #16 ZNHIT6 (ENSMPUG00000005352) #18 CCN1 (ENSMPUG00000005430) #19 DDAH1 (ENSMPUG00000005441) #20 BCL10 (ENSMPUG00000005447) #21 ENSMPUG00000005524 #22 SYDE2 (ENSMPUG00000005531) #23 DNAI3 (ENSMPUG00000005544) #24 MCOLN3 (ENSMPUG00000005571) #25 LPAR3 (ENSMPUG00000005683) SSX2IP (ENSMPUG00000005687) CTBS (ENSMPUG00000005696) SPATA1 (ENSMPUG00000005701) ENSMPUG00000005730 ENSMPUG00000005736 DNASE2B (ENSMPUG00000005741) ENSMPUG00000005748 ENSMPUG00000005757 SAMD13 (ENSMPUG00000005761) PRKACB (ENSMPUG00000005765) TTLL7 (ENSMPUG00000005774) American mink MODERN SPECIES 141 ENSNVIG00000010303 HS2ST (ENSNVIG00000010265) #7 SELENOF (ENSNVIG00000010248) #8 SH3GLB1 (ENSNVIG00000010176) #9 ENSNVIG00000010085 #11 CLCA4 (ENSNVIG00000010023) #12 CLCA1 (ENSNVIG00000009950) #13 CLCA2 (ENSNVIG00000009915) #14 ODF2L (ENSNVIG00000009848) #15 COL24A1 (ENSNVIG00000009756) #16 ZNHIT6 (ENSNVIG00000009678) #18 CCN1 (ENSNVIG00000009667) #19 ENSNVIG00000009665 DDAH1 (ENSNVIG00000009631) #20 BCL10 (ENSNVIG00000009612) #21 C1orf52 (ENSNVIG00000009606) #22 SYDE2 (ENSNVIG00000009581) #23 DNAI3 (ENSNVIG00000009565) #24 MCOLN3 (ENSNVIG00000009481) #25 MCOLN2 (ENSNVIG00000009411) ##25 LPAR3 (ENSNVIG00000009396) SSX2IP (ENSNVIG00000009366) CTBS (ENSNVIG00000009351) SPATA1 (ENSNVIG00000009323) ENSNVIG00000009308 RPF1 (ENSNVIG00000009290) DNASE2B (ENSNVIG00000009276) ENSNVIG00000009249 ENSNVIG00000009242 ENSNVIG00000009235 SAMD13 (ENSNVIG00000009219) Eulipotyphla ANCESTRAL SPECIES ENSGT00390000017398 #22 Hedgehog DUPLICATION Hedgehog MODERN SPECIES 9072 ENSEEUG00000003599 #22 Hedgehog MODERN SPECIES 10725 ENSEEUG00000013639 #22 Common shrew MODERN SPECIES 4242 ENSSARG00000000256 #22 Euarchontoglires ANCESTRAL SPECIES ENSGT00500000046198 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Glires ANCESTRAL SPECIES ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Lagomorpha ANCESTRAL SPECIES 73 ENSGT00940000155827 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00960000193082 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b Rabbit MODERN SPECIES 4 ENSOCUG00000030334 ENSOCUG00000025724 ENSOCUG00000015437 #12 ENSOCUG00000033661 CLCA1 (ENSOCUG00000004736) #13 CLCA2 (ENSOCUG00000004727) #14 ODF2L (ENSOCUG00000001834) #15 ENSOCUG00000036832 COL24A1 (ENSOCUG00000003917) #16 ZNHIT6 (ENSOCUG00000003910) #18 CCN1 (ENSOCUG00000003905) #19 ENSOCUG00000026503 DDAH1 (ENSOCUG00000005249) #20 BCL10 (ENSOCUG00000016199) #21 ENSOCUG00000035286 C1orf52 (ENSOCUG00000002803) #22 SYDE2 (ENSOCUG00000022246) #23 DNAI3 (ENSOCUG00000010160) #24 MCOLN3 (ENSOCUG00000009332) #25 MCOLN2 (ENSOCUG00000009322) ##25 ENSOCUG00000027616 LPAR3 (ENSOCUG00000024789) SSX2IP (ENSOCUG00000015685) ENSOCUG00000032268 CTBS (ENSOCUG00000003059) SPATA1 (ENSOCUG00000006613) GNG5 (ENSOCUG00000036571) ENSOCUG00000014803 ENSOCUG00000027397 ENSOCUG00000029744 ENSOCUG00000023908 Pika MODERN SPECIES 2693 ENSOPRG00000011386 #18 CCN1 (ENSOPRG00000011377) #19 DDAH1 (ENSOPRG00000011345) #20 BCL10 (ENSOPRG00000011338) #21 C1orf52 (ENSOPRG00000011332) #22 Rodentia ANCESTRAL SPECIES ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Rodentia_B ANCESTRAL SPECIES ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Myomorpha ANCESTRAL SPECIES 12 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Muroidea ANCESTRAL SPECIES 6 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.g.a #11 ENSGT00940000157555.h #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Muroidea_A ANCESTRAL SPECIES 5 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.h #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Cricetidae ANCESTRAL SPECIES 6 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.g.a #11 ENSGT00940000157555.g.b #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892.j #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b.uc ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b ENSGT00940000161169 Cricetidae_B ANCESTRAL SPECIES 3 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.g.a #11 ENSGT00940000157555.g.b #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892.j #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b.uc ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00900000143848 Prairie vole MODERN SPECIES 8 Selenof (ENSMOCG00000002490) #8 Sh3glb1 (ENSMOCG00000013092) #9 ENSMOCG00000000717 #11 ENSMOCG00000005395 #11 ENSMOCG00000016514 #12 ENSMOCG00000009777 Clca1 (ENSMOCG00000015412) #13 Clca2 (ENSMOCG00000021161) #14 Odf2l (ENSMOCG00000013411) #15 Col24a1 (ENSMOCG00000010555) Znhit6 (ENSMOCG00000011010) #18 Ccn1 (ENSMOCG00000013502) #19 ENSMOCG00000009612 Ddah1 (ENSMOCG00000018589) #20 Bcl10 (ENSMOCG00000004469) #21 2410004B18Rik (ENSMOCG00000000971) #22 Syde2 (ENSMOCG00000011613) #23 Dnai3 (ENSMOCG00000004827) #24 Mcoln3 (ENSMOCG00000011948) #25 Mcoln2 (ENSMOCG00000005258) ##25 Lpar3 (ENSMOCG00000012201) Ssx2ip (ENSMOCG00000014448) Ctbs (ENSMOCG00000020087) ENSMOCG00000022893 ENSMOCG00000000334 ENSMOCG00000005222 Rpf1 (ENSMOCG00000018274) Dnase2b (ENSMOCG00000000354) Uox (ENSMOCG00000016256) Samd13 (ENSMOCG00000010216) Prkacb (ENSMOCG00000001336) Northern American deer mouse MODERN SPECIES 19 Selenof (ENSPEMG00000020473) #8 Sh3glb1 (ENSPEMG00000030955) #9 ENSPEMG00000022101 #11 ENSPEMG00000022445 #11 ENSPEMG00000021736 #11 ENSPEMG00000007919 #12 Clca1 (ENSPEMG00000023001) #13 Clca2 (ENSPEMG00000021862) #14 Odf2l (ENSPEMG00000022035) #15 Col24a1 (ENSPEMG00000010634) Znhit6 (ENSPEMG00000022716) #18 Ccn1 (ENSPEMG00000000386) #19 ENSPEMG00000031409 Ddah1 (ENSPEMG00000027558) #20 Bcl10 (ENSPEMG00000026389) #21 ENSPEMG00000028265 #22 Syde2 (ENSPEMG00000022180) #23 Dnai3 (ENSPEMG00000023437) #24 Mcoln3 (ENSPEMG00000014566) #25 Mcoln2 (ENSPEMG00000015343) ##25 Lpar3 (ENSPEMG00000022406) Ssx2ip (ENSPEMG00000023032) Ctbs (ENSPEMG00000006184) Spata1 (ENSPEMG00000023282) Rpf1 (ENSPEMG00000023196) Dnase2b (ENSPEMG00000023363) Uox (ENSPEMG00000023036) ENSPEMG00000028095 4930503B20Rik (ENSPEMG00000023951) Prkacb (ENSPEMG00000030921) ENSPEMG00000024491 Cricetinae ANCESTRAL SPECIES 12 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.g.a #11 ENSGT00940000157555.g.b #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892.j #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b.uc ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b ENSGT00940000161169 Golden Hamster MODERN SPECIES 735 Hs2st1 (ENSMAUG00000009309) #7 Selenof (ENSMAUG00000002011) #8 ENSMAUG00000008381 #9 ENSMAUG00000018947 #11 ENSMAUG00000017339 #11 ENSMAUG00000014124 #12 Clca1 (ENSMAUG00000020334) #13 Clca2 (ENSMAUG00000020634) #14 Odf2l (ENSMAUG00000001252) #15 Col24a1 (ENSMAUG00000010161) ENSMAUG00000020898 #18 Ccn1 (ENSMAUG00000006075) #19 ENSMAUG00000017168 Ddah1 (ENSMAUG00000012623) #20 ENSMAUG00000011334 #21 2410004B18Rik (ENSMAUG00000019352) #22 Syde2 (ENSMAUG00000017505) #23 Dnai3 (ENSMAUG00000005774) #24 Mcoln3 (ENSMAUG00000018992) #25 Mcoln2 (ENSMAUG00000006761) ##25 Ssx2ip (ENSMAUG00000013155) ENSMAUG00000008498 Spata1 (ENSMAUG00000008313) ENSMAUG00000019525 Rpf1 (ENSMAUG00000006030) Dnase2b (ENSMAUG00000019185) Uox (ENSMAUG00000014563) ENSMAUG00000019018 Prkacb (ENSMAUG00000002887) ENSMAUG00000011447 Chinese hamster chok1gshd MODERN SPECIES 219 Hs2st1 (ENSCGRG00001010979) #7 Selenof (ENSCGRG00001004806) #8 Sh3glb1 (ENSCGRG00001002284) #9 ENSCGRG00001022589 #11 ENSCGRG00001018022 #11 ENSCGRG00001017040 #12 Clca1 (ENSCGRG00001016411) #13 Clca2 (ENSCGRG00001014297) #14 Odf2l (ENSCGRG00001012670) #15 Col24a1 (ENSCGRG00001021909) Znhit6 (ENSCGRG00001018263) #18 Ccn1 (ENSCGRG00001017662) #19 ENSCGRG00001016514 Ddah1 (ENSCGRG00001019335) #20 Bcl10 (ENSCGRG00001018169) #21 2410004B18Rik (ENSCGRG00001015888) #22 Syde2 (ENSCGRG00001014086) #23 ENSCGRG00001011030 #24 Mcoln3 (ENSCGRG00001004877) #25 Mcoln2 (ENSCGRG00001001707) ##25 Lpar3 (ENSCGRG00001024413) Ssx2ip (ENSCGRG00001019268) Ctbs (ENSCGRG00001014407) Spata1 (ENSCGRG00001008771) ENSCGRG00001011533 Rpf1 (ENSCGRG00001001189) Dnase2b (ENSCGRG00001000256) Uox (ENSCGRG00001021254) 4930503B20Rik (ENSCGRG00001018506) Samd13 (ENSCGRG00001015430) PRKACB (ENSCGRG00001022775) Murinae ANCESTRAL SPECIES 5 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.h.a #11 ENSGT00940000157555.h.b #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Mus ANCESTRAL SPECIES 7 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.h.a #11 ENSGT00940000157555.h.b #11 ENSGT00940000160416.m #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Mus_A ANCESTRAL SPECIES 9 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.h.a #11 ENSGT00940000157555.h.b #11 ENSGT00940000160416.m #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Mus_B ANCESTRAL SPECIES 8 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.h.a.a #11 ENSGT00940000157555.h.b #11 ENSGT00940000160416.n #12 ENSGT00940000160416.m #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.a ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Mouse MODERN SPECIES 12 Selenof (ENSMUSG00000037072) #8 Sh3glb1 (ENSMUSG00000037062) #9 Clca3a1 (ENSMUSG00000056025) #11 Clca3a2 (ENSMUSG00000028262) #11 Clca3b (ENSMUSG00000037033) #11 Clca4b (ENSMUSG00000074195) #12 Clca4a (ENSMUSG00000068547) #12 Clca1 (ENSMUSG00000028255) #13 Clca2 (ENSMUSG00000036960) #14 Odf2l (ENSMUSG00000028256) #15 Col24a1 (ENSMUSG00000028197) Znhit6 (ENSMUSG00000074182) #18 Ccn1 (ENSMUSG00000028195) #19 Ddah1 (ENSMUSG00000028194) #20 Bcl10 (ENSMUSG00000028191) #21 2410004B18Rik (ENSMUSG00000036873) #22 Syde2 (ENSMUSG00000036863) #23 Dnai3 (ENSMUSG00000043020) #24 Mcoln3 (ENSMUSG00000036853) #25 Mcoln2 (ENSMUSG00000011008) ##25 Lpar3 (ENSMUSG00000036832) Ssx2ip (ENSMUSG00000036825) Ctbs (ENSMUSG00000028189) Spata1 (ENSMUSG00000028188) Gng5 (ENSMUSG00000068523) Rpf1 (ENSMUSG00000028187) Uox (ENSMUSG00000028186) Dnase2b (ENSMUSG00000028185) 4930503B20Rik (ENSMUSG00000090202) Samd13 (ENSMUSG00000048652) Prkacb (ENSMUSG00000005034) Mus_C ANCESTRAL SPECIES 6 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555.h.a.a #11 ENSGT00940000157555.h.b #11 ENSGT00940000160416.m #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Steppe mouse MODERN SPECIES 3408 ENSMSIG00000006728 Znhit6 (ENSMSIG00000006758) #18 Ccn1 (ENSMSIG00000006855) #19 ENSMSIG00000006885 Ddah1 (ENSMSIG00000006895) #20 Bcl10 (ENSMSIG00000006967) #21 2410004B18Rik (ENSMSIG00000006989) #22 Syde2 (ENSMSIG00000006994) #23 Dnai3 (ENSMSIG00000007023) #24 Mcoln3 (ENSMSIG00000007086) #25 Mcoln2 (ENSMSIG00000007140) ##25 Lpar3 (ENSMSIG00000007212) ENSMSIG00000007226 Ssx2ip (ENSMSIG00000007247) Ctbs (ENSMSIG00000007413) Spata1 (ENSMSIG00000007443) ENSMSIG00000007613 Rpf1 (ENSMSIG00000007632) Dnase2b (ENSMSIG00000007688) ENSMSIG00000007717 4930503B20Rik (ENSMSIG00000007775) Prkacb (ENSMSIG00000007822) spretus MODERN SPECIES 12 Pkn2 (MGP_SPRETEiJ_G0026654) Lmo4 (MGP_SPRETEiJ_G0026655) Hs2st1 (MGP_SPRETEiJ_G0026656) #7 MGP_SPRETEiJ_G0026657 Sh3glb1 (MGP_SPRETEiJ_G0026658) #9 MGP_SPRETEiJ_G0026659 #11 Clca3b (MGP_SPRETEiJ_G0026660) #11 Clca1 (MGP_SPRETEiJ_G0026661) #13 Clca2 (MGP_SPRETEiJ_G0026662) #14 Odf2l (MGP_SPRETEiJ_G0026663) #15 Col24a1 (MGP_SPRETEiJ_G0026664) Znhit6 (MGP_SPRETEiJ_G0026665) #18 Ccn1 (MGP_SPRETEiJ_G0026666) #19 Ddah1 (MGP_SPRETEiJ_G0026667) #20 MGP_SPRETEiJ_G0026668 #21 2410004B18Rik (MGP_SPRETEiJ_G0026669) #22 Syde2 (MGP_SPRETEiJ_G0026670) #23 Dnai3 (MGP_SPRETEiJ_G0026671) #24 MGP_SPRETEiJ_G0026672 #25 Mcoln2 (MGP_SPRETEiJ_G0026673) ##25 Lpar3 (MGP_SPRETEiJ_G0026674) Ssx2ip (MGP_SPRETEiJ_G0026675) Ctbs (MGP_SPRETEiJ_G0026676) Spata1 (MGP_SPRETEiJ_G0026677) MGP_SPRETEiJ_G0026678 Rpf1 (MGP_SPRETEiJ_G0026679) Uox (MGP_SPRETEiJ_G0026680) Dnase2b (MGP_SPRETEiJ_G0026681) 4930503B20Rik (MGP_SPRETEiJ_G0026682) Samd13 (MGP_SPRETEiJ_G0026683) Prkacb (MGP_SPRETEiJ_G0026684) Ryukyu mouse MODERN SPECIES 12 Hs2st1 (MGP_CAROLIEiJ_G0025701) #7 MGP_CAROLIEiJ_G0025702 Sh3glb1 (MGP_CAROLIEiJ_G0025703) #9 MGP_CAROLIEiJ_G0025704 #11 MGP_CAROLIEiJ_G0025705 #11 Clca3b (MGP_CAROLIEiJ_G0025706) #11 MGP_CAROLIEiJ_G0025707 #12 MGP_CAROLIEiJ_G0025708 #12 Clca1 (MGP_CAROLIEiJ_G0025709) #13 Clca2 (MGP_CAROLIEiJ_G0025710) #14 Odf2l (MGP_CAROLIEiJ_G0025711) #15 Col24a1 (MGP_CAROLIEiJ_G0025712) Znhit6 (MGP_CAROLIEiJ_G0025713) #18 Ccn1 (MGP_CAROLIEiJ_G0025714) #19 Ddah1 (MGP_CAROLIEiJ_G0025715) #20 2410004B18Rik (MGP_CAROLIEiJ_G0025716) #22 Syde2 (MGP_CAROLIEiJ_G0025717) #23 Dnai3 (MGP_CAROLIEiJ_G0025718) #24 Mcoln3 (MGP_CAROLIEiJ_G0025719) #25 Mcoln2 (MGP_CAROLIEiJ_G0025720) ##25 Lpar3 (MGP_CAROLIEiJ_G0025721) Ssx2ip (MGP_CAROLIEiJ_G0025722) Ctbs (MGP_CAROLIEiJ_G0025723) Spata1 (MGP_CAROLIEiJ_G0025724) MGP_CAROLIEiJ_G0025725 Rpf1 (MGP_CAROLIEiJ_G0025726) Uox (MGP_CAROLIEiJ_G0025727) Dnase2b (MGP_CAROLIEiJ_G0025728) 4930503B20Rik (MGP_CAROLIEiJ_G0025729) Samd13 (MGP_CAROLIEiJ_G0025730) Prkacb (MGP_CAROLIEiJ_G0025731) Shrew mouse MODERN SPECIES 17 MGP_PahariEiJ_G0027152 Sh3glb1 (MGP_PahariEiJ_G0027153) #9 MGP_PahariEiJ_G0027154 #11 MGP_PahariEiJ_G0027155 #11 Clca3b (MGP_PahariEiJ_G0027156) #11 MGP_PahariEiJ_G0027157 #12 MGP_PahariEiJ_G0027158 #12 Clca1 (MGP_PahariEiJ_G0027159) #13 Clca2 (MGP_PahariEiJ_G0027160) #14 Odf2l (MGP_PahariEiJ_G0027161) #15 Col24a1 (MGP_PahariEiJ_G0027162) Znhit6 (MGP_PahariEiJ_G0027163) #18 Ccn1 (MGP_PahariEiJ_G0027164) #19 Ddah1 (MGP_PahariEiJ_G0027165) #20 Bcl10 (MGP_PahariEiJ_G0027166) #21 2410004B18Rik (MGP_PahariEiJ_G0027167) #22 Syde2 (MGP_PahariEiJ_G0027168) #23 Dnai3 (MGP_PahariEiJ_G0027169) #24 Mcoln3 (MGP_PahariEiJ_G0027170) #25 Mcoln2 (MGP_PahariEiJ_G0027171) ##25 Lpar3 (MGP_PahariEiJ_G0027172) Ssx2ip (MGP_PahariEiJ_G0027173) Ctbs (MGP_PahariEiJ_G0027174) Spata1 (MGP_PahariEiJ_G0027175) MGP_PahariEiJ_G0027176 MGP_PahariEiJ_G0027177 Uox (MGP_PahariEiJ_G0027178) Dnase2b (MGP_PahariEiJ_G0027179) 4930503B20Rik (MGP_PahariEiJ_G0027180) Samd13 (MGP_PahariEiJ_G0027181) Prkacb (MGP_PahariEiJ_G0027182) Rat MODERN SPECIES 11 Lmo4 (ENSRNOG00000009205) Hs2st1 (ENSRNOG00000012549) #7 Selenof (ENSRNOG00000055257) #8 Sh3glb1 (ENSRNOG00000012957) #9 Clca5 (ENSRNOG00000013334) #11 Clca4l (ENSRNOG00000036877) #11 Clca4 (ENSRNOG00000029889) #12 Clca1 (ENSRNOG00000060831) #13 Clca2 (ENSRNOG00000013771) #14 Odf2l (ENSRNOG00000014059) #15 Col24a1 (ENSRNOG00000014143) Znhit6 (ENSRNOG00000030049) #18 Ccn1 (ENSRNOG00000014350) #19 Ddah1 (ENSRNOG00000014613) #20 Bcl10 (ENSRNOG00000042389) #21 C2h1orf52 (ENSRNOG00000014857) #22 Syde2 (ENSRNOG00000026186) #23 Dnai3 (ENSRNOG00000014893) #24 Mcoln3 (ENSRNOG00000015024) #25 Mcoln2 (ENSRNOG00000015089) ##25 Lpar3 (ENSRNOG00000064204) Ssx2ip (ENSRNOG00000015425) Ctbs (ENSRNOG00000015573) Spata1 (ENSRNOG00000015678) ENSRNOG00000068715 Rpf1 (ENSRNOG00000015969) Uox (ENSRNOG00000016339) Dnase2b (ENSRNOG00000016262) Samd13 (ENSRNOG00000016432) Prkacb (ENSRNOG00000004978) Ttll7 (ENSRNOG00000031997) Upper Galilee mountains blind mole rat MODERN SPECIES 1893 ENSNGAG00000017891 ENSNGAG00000011552 Sh3glb1 (ENSNGAG00000008323) #9 ENSNGAG00000022151 #11 ENSNGAG00000020840 #11 ENSNGAG00000021773 #12 Clca1 (ENSNGAG00000020353) #13 Clca2 (ENSNGAG00000017320) #14 Odf2l (ENSNGAG00000018510) #15 ENSNGAG00000015725 #16 Znhit6 (ENSNGAG00000007630) #18 Ccn1 (ENSNGAG00000001335) #19 ENSNGAG00000003738 Ddah1 (ENSNGAG00000018033) #20 Bcl10 (ENSNGAG00000015335) #21 2410004B18Rik (ENSNGAG00000014421) #22 Syde2 (ENSNGAG00000012962) #23 Dnai3 (ENSNGAG00000011144) #24 Mcoln3 (ENSNGAG00000018883) #25 Mcoln2 (ENSNGAG00000016270) ##25 Lpar3 (ENSNGAG00000020209) Ssx2ip (ENSNGAG00000001910) Ctbs (ENSNGAG00000008828) Spata1 (ENSNGAG00000019652) ENSNGAG00000018264 Rpf1 (ENSNGAG00000018028) Dnase2b (ENSNGAG00000011775) Uox (ENSNGAG00000022385) 4930503B20Rik (ENSNGAG00000021614) Samd13 (ENSNGAG00000013463) Prkacb (ENSNGAG00000023069) Lesser Egyptian jerboa MODERN SPECIES 52 Lmo4 (ENSJJAG00000012847) Hs2st1 (ENSJJAG00000000519) #7 ENSJJAG00000009914 Sh3glb1 (ENSJJAG00000018470) #9 ENSJJAG00000018844 #11 ENSJJAG00000023348 #12 Clca1 (ENSJJAG00000008764) #13 Clca2 (ENSJJAG00000012700) #14 Odf2l (ENSJJAG00000007954) #15 ENSJJAG00000020958 #16 Znhit6 (ENSJJAG00000021153) #18 Ccn1 (ENSJJAG00000018163) #19 ENSJJAG00000012670 Ddah1 (ENSJJAG00000016256) #20 Bcl10 (ENSJJAG00000001473) #21 2410004B18Rik (ENSJJAG00000011597) #22 Syde2 (ENSJJAG00000018610) #23 Dnai3 (ENSJJAG00000023564) #24 Mcoln3 (ENSJJAG00000023078) #25 Mcoln2 (ENSJJAG00000014832) ##25 Lpar3 (ENSJJAG00000021688) Ssx2ip (ENSJJAG00000010467) Ctbs (ENSJJAG00000018386) ENSJJAG00000006619 ENSJJAG00000014898 ENSJJAG00000011539 Rpf1 (ENSJJAG00000018873) Dnase2b (ENSJJAG00000009922) Uox (ENSJJAG00000008960) 4930503B20Rik (ENSJJAG00000022696) Samd13 (ENSJJAG00000021117) Kangaroo rat MODERN SPECIES 358 Prkab2 (ENSDORG00000027473) ENSDORG00000024515 Sec22b (ENSDORG00000023311) Notch2 (ENSDORG00000001171) Reg4 (ENSDORG00000009271) Hmgcs2 (ENSDORG00000008532) Phgdh (ENSDORG00000008531) Clca1 (ENSDORG00000008434) #13 Clca2 (ENSDORG00000009200) #14 Odf2l (ENSDORG00000009195) #15 ENSDORG00000015616 #16 Znhit6 (ENSDORG00000029755) #18 Ccn1 (ENSDORG00000005602) #19 Ddah1 (ENSDORG00000013259) #20 ENSDORG00000028780 #21 2410004B18Rik (ENSDORG00000012509) #22 Syde2 (ENSDORG00000005799) #23 Dnai3 (ENSDORG00000015030) #24 Mcoln3 (ENSDORG00000014635) #25 Mcoln2 (ENSDORG00000014631) ##25 Lpar3 (ENSDORG00000014630) Ssx2ip (ENSDORG00000015060) Ctbs (ENSDORG00000015059) ENSDORG00000029065 ENSDORG00000029873 ENSDORG00000024192 Rpf1 (ENSDORG00000000607) Dnase2b (ENSDORG00000000604) Uox (ENSDORG00000027583) 4930503B20Rik (ENSDORG00000029007) Samd13 (ENSDORG00000026931) Rodentia_A ANCESTRAL SPECIES ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416.p #12 ENSGT00940000160416.o #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Sciuridae ANCESTRAL SPECIES 3 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416.p #12 ENSGT00940000160416.o #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00940000168548 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b ENSGT00940000161169 Marmotini ANCESTRAL SPECIES ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416.p #12 ENSGT00940000160416.o.a #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00940000168548 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000003718.d.kd.b ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b ENSGT00940000161169 Marmotini_b DUPLICATION Marmotini_b ANCESTRAL SPECIES 166 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000003718.d.kd.b ENSGT00390000017398.i #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b ENSGT00940000161169 Arctic ground squirrel MODERN SPECIES 330 CLCA1 (ENSUPAG00010012033) #13 CLCA2 (ENSUPAG00010011985) #14 ODF2L (ENSUPAG00010011819) #15 ENSUPAG00010011804 #16 ZNHIT6 (ENSUPAG00010011778) #18 CCN1 (ENSUPAG00010011774) #19 ENSUPAG00010011773 DDAH1 (ENSUPAG00010011761) #20 BCL10 (ENSUPAG00010011755) #21 ENSUPAG00010011746 ENSUPAG00010011740 #22 SYDE2 (ENSUPAG00010011732) #23 DNAI3 (ENSUPAG00010011711) #24 MCOLN3 (ENSUPAG00010011700) #25 MCOLN2 (ENSUPAG00010011678) ##25 LPAR3 (ENSUPAG00010011664) SSX2IP (ENSUPAG00010011627) CTBS (ENSUPAG00010011611) ENSUPAG00010011599 ENSUPAG00010011592 RPF1 (ENSUPAG00010011580) DNASE2B (ENSUPAG00010011561) ENSUPAG00010011547 ENSUPAG00010011541 SAMD13 (ENSUPAG00010011529) PRKACB (ENSUPAG00010011454) Squirrel MODERN SPECIES 208 ENSSTOG00000031983 #16 ZNHIT6 (ENSSTOG00000024455) #18 CCN1 (ENSSTOG00000019882) #19 ENSSTOG00000031250 DDAH1 (ENSSTOG00000012594) #20 BCL10 (ENSSTOG00000027214) #21 C1orf52 (ENSSTOG00000010698) #22 SYDE2 (ENSSTOG00000012586) #23 DNAI3 (ENSSTOG00000012564) #24 MCOLN3 (ENSSTOG00000011310) #25 MCOLN2 (ENSSTOG00000011302) ##25 LPAR3 (ENSSTOG00000005282) SSX2IP (ENSSTOG00000008644) CTBS (ENSSTOG00000015319) ENSSTOG00000021329 ENSSTOG00000033029 GNG5 (ENSSTOG00000008641) RPF1 (ENSSTOG00000008635) DNASE2B (ENSSTOG00000023007) ENSSTOG00000022835 SAMD13 (ENSSTOG00000003083) PRKACB (ENSSTOG00000003074) Marmotini_b ANCESTRAL SPECIES ENSGT00390000017398.j #22 Arctic ground squirrel MODERN SPECIES 173 PPEF1 (ENSUPAG00010013699) RS1 (ENSUPAG00010013669) CDKL5 (ENSUPAG00010013645) SCML2 (ENSUPAG00010013630) ENSUPAG00010013622 #22 RAI2 (ENSUPAG00010013618) ENSUPAG00010013597 NHS (ENSUPAG00010013557) REPS2 (ENSUPAG00010013493) RBBP7 (ENSUPAG00010013404) TXLNG (ENSUPAG00010013379) SYAP1 (ENSUPAG00010013371) ENSUPAG00010013364 S100G (ENSUPAG00010013357) CTPS2 (ENSUPAG00010013304) GRPR (ENSUPAG00010013272) AP1S2 (ENSUPAG00010013242) ZRSR2 (ENSUPAG00010013230) ENSUPAG00010013220 CA5B (ENSUPAG00010013214) Alpin marmot MODERN SPECIES 96 ENSMMMG00000006883 #12 ENSMMMG00000007100 #12 ENSMMMG00000008525 #12 CLCA1 (ENSMMMG00000008544) #13 CLCA2 (ENSMMMG00000008561) #14 ODF2L (ENSMMMG00000008590) #15 ENSMMMG00000008742 ENSMMMG00000008750 #16 ENSMMMG00000008758 ZNHIT6 (ENSMMMG00000008767) #18 CCN1 (ENSMMMG00000008796) #19 ENSMMMG00000008810 DDAH1 (ENSMMMG00000008813) #20 ENSMMMG00000008820 #21 ENSMMMG00000008825 C1orf52 (ENSMMMG00000008832) #22 SYDE2 (ENSMMMG00000008839) #23 DNAI3 (ENSMMMG00000008854) #24 MCOLN3 (ENSMMMG00000008888) #25 MCOLN2 (ENSMMMG00000008910) ##25 LPAR3 (ENSMMMG00000008955) SSX2IP (ENSMMMG00000008964) CTBS (ENSMMMG00000009025) ENSMMMG00000009057 GNG5 (ENSMMMG00000009067) RPF1 (ENSMMMG00000009079) DNASE2B (ENSMMMG00000009098) ENSMMMG00000009120 SAMD13 (ENSMMMG00000009129) ENSMMMG00000009152 ENSMMMG00000009169 Eurasian red squirrel MODERN SPECIES CLCA2 (ENSSVLG00005001063) #14 ODF2L (ENSSVLG00005001026) #15 ENSSVLG00005000969 ENSSVLG00005000957 COL24A1 (ENSSVLG00005000916) #16 ENSSVLG00005000886 ZNHIT6 (ENSSVLG00005000846) #18 ENSSVLG00005000810 CCN1 (ENSSVLG00005000795) #19 ENSSVLG00005000783 ENSSVLG00005000769 DDAH1 (ENSSVLG00005000747) #20 ENSSVLG00005000713 ENSSVLG00005000702 BCL10 (ENSSVLG00005000684) #21 C1orf52 (ENSSVLG00005000674) #22 GABARAP (ENSSVLG00005000657) SYDE2 (ENSSVLG00005000635) #23 DNAI3 (ENSSVLG00005000535) #24 MCOLN3 (ENSSVLG00005000388) #25 MCOLN2 (ENSSVLG00005000331) ##25 LPAR3 (ENSSVLG00005000296) SSX2IP (ENSSVLG00005000274) CTBS (ENSSVLG00005000249) SPATA1 (ENSSVLG00005000234) ENSSVLG00005000219 RPF1 (ENSSVLG00005000206) DNASE2B (ENSSVLG00005000189) ENSSVLG00005000176 SAMD13 (ENSSVLG00005000161) PRKACB (ENSSVLG00005023190) Hystricomorpha ANCESTRAL SPECIES 44 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416.p #12 ENSGT00940000160416.o #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Naked mole-rat female MODERN SPECIES 10 ENSHGLG00000035709 #12 ENSHGLG00000012115 #12 ENSHGLG00000015121 ENSHGLG00000037078 #12 CLCA1 (ENSHGLG00000015470) #13 CLCA2 (ENSHGLG00000015413) #14 ENSHGLG00000010829 #15 COL24A1 (ENSHGLG00000004244) #16 ENSHGLG00000036484 ZNHIT6 (ENSHGLG00000007009) #18 CCN1 (ENSHGLG00000007980) #19 DDAH1 (ENSHGLG00000047230) #20 ENSHGLG00000033883 ENSHGLG00000041300 BCL10 (ENSHGLG00000004369) #21 C1orf52 (ENSHGLG00000004452) #22 ENSHGLG00000039413 SYDE2 (ENSHGLG00000005398) #23 ENSHGLG00000006816 #24 ENSHGLG00000047666 MCOLN3 (ENSHGLG00000009140) #25 ENSHGLG00000005122 ##25 LPAR3 (ENSHGLG00000033915) ENSHGLG00000035667 SSX2IP (ENSHGLG00000007408) CTBS (ENSHGLG00000008383) SPATA1 (ENSHGLG00000005825) GNG5 (ENSHGLG00000005854) RPF1 (ENSHGLG00000048402) ENSHGLG00000009023 DNASE2B (ENSHGLG00000048352) Hystricomorpha_a ANCESTRAL SPECIES 14 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416.o.f #12 ENSGT00940000160416.p #12 ENSGT00940000160416.o.e #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Hystricomorpha_b ANCESTRAL SPECIES 6 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416.o.e #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000160313.k ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Degu DUPLICATION Degu MODERN SPECIES 150 ENSODEG00000002911 SH3GLB1 (ENSODEG00000003003) #9 ENSODEG00000002661 #11 ENSODEG00000002677 #11 ENSODEG00000002712 #12 ENSODEG00000002790 #12 CLCA2 (ENSODEG00000002864) #14 ODF2L (ENSODEG00000002955) #15 ENSODEG00000003023 COL24A1 (ENSODEG00000003113) #16 ZNHIT6 (ENSODEG00000003486) #18 CCN1 (ENSODEG00000003521) #19 ENSODEG00000018975 DDAH1 (ENSODEG00000003545) #20 BCL10 (ENSODEG00000003555) #21 ENSODEG00000003582 #22 ENSODEG00000003641 SYDE2 (ENSODEG00000003681) #23 DNAI3 (ENSODEG00000003772) #24 MCOLN3 (ENSODEG00000004499) #25 MCOLN2 (ENSODEG00000004650) ##25 LPAR3 (ENSODEG00000004676) ENSODEG00000019111 SSX2IP (ENSODEG00000004753) CTBS (ENSODEG00000005131) ENSODEG00000005441 ENSODEG00000002981 ENSODEG00000003027 ENSODEG00000003070 ENSODEG00000003125 DNASE2B (ENSODEG00000003140) Degu MODERN SPECIES 46 ENSODEG00000020279 CD2AP (ENSODEG00000015575) OPN5 (ENSODEG00000015357) ENSODEG00000015033 ENSODEG00000014928 ANXA11 (ENSODEG00000014938) ZCCHC24 (ENSODEG00000015281) PPIF (ENSODEG00000015244) ZMIZ1 (ENSODEG00000015504) RPS24 (ENSODEG00000015382) POLR3A (ENSODEG00000015146) DLG5 (ENSODEG00000015060) KCNMA1 (ENSODEG00000016449) LRMDA (ENSODEG00000015494) ZNF503 (ENSODEG00000015000) ENSODEG00000014826 #22 COMTD1 (ENSODEG00000015636) VDAC2 (ENSODEG00000014433) SAMD8 (ENSODEG00000015010) DUSP13 (ENSODEG00000014816) DUSP29 (ENSODEG00000014367) ENSODEG00000014295 ENSODEG00000020272 ENSODEG00000015430 ENSODEG00000015093 VCL (ENSODEG00000015408) PLAU (ENSODEG00000015271) CAMK2G (ENSODEG00000015036) NDST2 (ENSODEG00000016187) ZSWIM8 (ENSODEG00000015594) CHCHD1 (ENSODEG00000013911) Long-tailed chinchilla MODERN SPECIES 130 ENSCLAG00000009271 #11 ENSCLAG00000009598 #11 ENSCLAG00000010819 #12 ENSCLAG00000007523 #12 CLCA1 (ENSCLAG00000008032) #13 CLCA2 (ENSCLAG00000004004) #14 ODF2L (ENSCLAG00000004825) #15 ENSCLAG00000006341 COL24A1 (ENSCLAG00000009364) #16 ENSCLAG00000011135 ZNHIT6 (ENSCLAG00000011251) #18 CCN1 (ENSCLAG00000015005) #19 ENSCLAG00000017789 DDAH1 (ENSCLAG00000003885) #20 BCL10 (ENSCLAG00000003932) #21 C1orf52 (ENSCLAG00000003961) #22 SYDE2 (ENSCLAG00000004038) #23 DNAI3 (ENSCLAG00000004279) #24 MCOLN3 (ENSCLAG00000004543) #25 MCOLN2 (ENSCLAG00000004888) ##25 LPAR3 (ENSCLAG00000005453) SSX2IP (ENSCLAG00000012846) CTBS (ENSCLAG00000013866) ENSCLAG00000009170 ENSCLAG00000006867 RPF1 (ENSCLAG00000007607) ENSCLAG00000003910 DNASE2B (ENSCLAG00000004420) SAMD13 (ENSCLAG00000004824) ENSCLAG00000005050 PRKACB (ENSCLAG00000005809) Guinea pig MODERN SPECIES 2 SELENOF (ENSCPOG00000037223) #8 SH3GLB1 (ENSCPOG00000015176) #9 ENSCPOG00000015253 #11 ENSCPOG00000039214 #12 ENSCPOG00000001098 #12 ENSCPOG00000014950 #12 CLCA1 (ENSCPOG00000014947) #13 CLCA2 (ENSCPOG00000014944) #14 ODF2L (ENSCPOG00000004605) #15 COL24A1 (ENSCPOG00000001259) #16 ZNHIT6 (ENSCPOG00000001258) #18 CCN1 (ENSCPOG00000010120) #19 ENSCPOG00000034357 DDAH1 (ENSCPOG00000035239) #20 BCL10 (ENSCPOG00000033375) #21 C1orf52 (ENSCPOG00000011795) #22 SYDE2 (ENSCPOG00000001552) #23 DNAI3 (ENSCPOG00000001550) #24 MCOLN3 (ENSCPOG00000030466) #25 MCOLN2 (ENSCPOG00000006755) ##25 LPAR3 (ENSCPOG00000035050) SSX2IP (ENSCPOG00000012045) CTBS (ENSCPOG00000009243) ENSCPOG00000033072 ENSCPOG00000019991 ENSCPOG00000030942 RPF1 (ENSCPOG00000014316) DNASE2B (ENSCPOG00000011531) ENSCPOG00000024987 SAMD13 (ENSCPOG00000031933) PRKACB (ENSCPOG00000036250) Primates ANCESTRAL SPECIES 4 ENSGT00500000046198 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Strepsirrhini ANCESTRAL SPECIES ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.a ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000161169 Lemuriformes ANCESTRAL SPECIES ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.a ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000161169 Mouse lemur MODERN SPECIES 11 SELENOF (ENSMICG00000015940) #8 ENSMICG00000037323 SH3GLB1 (ENSMICG00000015928) #9 ENSMICG00000034178 #11 CLCA4 (ENSMICG00000015889) #12 ENSMICG00000031237 CLCA1 (ENSMICG00000015876) #13 ODF2L (ENSMICG00000015848) #15 COL24A1 (ENSMICG00000015782) #16 ZNHIT6 (ENSMICG00000015775) #18 CCN1 (ENSMICG00000015764) #19 ENSMICG00000033242 DDAH1 (ENSMICG00000015756) #20 ENSMICG00000029851 BCL10 (ENSMICG00000046947) #21 C1orf52 (ENSMICG00000015748) #22 SYDE2 (ENSMICG00000036942) #23 DNAI3 (ENSMICG00000014988) #24 MCOLN3 (ENSMICG00000014973) #25 MCOLN2 (ENSMICG00000014951) ##25 LPAR3 (ENSMICG00000034976) SSX2IP (ENSMICG00000031693) CTBS (ENSMICG00000047868) SPATA1 (ENSMICG00000034514) ENSMICG00000027648 ENSMICG00000003093 DNASE2B (ENSMICG00000037013) ENSMICG00000037252 ENSMICG00000042739 SAMD13 (ENSMICG00000036198) ENSMICG00000047801 Lemuriformes_a ANCESTRAL SPECIES 39 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186747 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.a ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00940000159078 Greater bamboo lemur MODERN SPECIES 537 SELENOF (ENSPSMG00000021549) #8 SH3GLB1 (ENSPSMG00000021643) #9 ENSPSMG00000021689 #11 ENSPSMG00000021691 #11 CLCA4 (ENSPSMG00000021703) #12 CLCA1 (ENSPSMG00000021724) #13 CLCA2 (ENSPSMG00000021729) #14 ODF2L (ENSPSMG00000021792) #15 COL24A1 (ENSPSMG00000021850) #16 ZNHIT6 (ENSPSMG00000021864) #18 ENSPSMG00000021872 CCN1 (ENSPSMG00000021878) #19 ENSPSMG00000021882 DDAH1 (ENSPSMG00000021897) #20 BCL10 (ENSPSMG00000021929) #21 C1orf52 (ENSPSMG00000021942) #22 SYDE2 (ENSPSMG00000021951) #23 DNAI3 (ENSPSMG00000021999) #24 MCOLN3 (ENSPSMG00000022026) #25 MCOLN2 (ENSPSMG00000022039) ##25 LPAR3 (ENSPSMG00000022047) SSX2IP (ENSPSMG00000022107) CTBS (ENSPSMG00000022172) SPATA1 (ENSPSMG00000022182) ENSPSMG00000022188 RPF1 (ENSPSMG00000022204) DNASE2B (ENSPSMG00000022211) ENSPSMG00000022213 SAMD13 (ENSPSMG00000022221) ENSPSMG00000022228 ENSPSMG00000022233 Coquerels sifaka MODERN SPECIES 846 HS2ST1 (ENSPCOG00000023483) #7 SELENOF (ENSPCOG00000008918) #8 ENSPCOG00000022033 SH3GLB1 (ENSPCOG00000006000) #9 ENSPCOG00000013545 #11 CLCA4 (ENSPCOG00000016905) #12 CLCA1 (ENSPCOG00000024996) #13 CLCA2 (ENSPCOG00000025009) #14 COL24A1 (ENSPCOG00000021719) #16 ENSPCOG00000026821 ZNHIT6 (ENSPCOG00000014824) #18 CCN1 (ENSPCOG00000020683) #19 ENSPCOG00000013303 DDAH1 (ENSPCOG00000028125) #20 BCL10 (ENSPCOG00000026735) #21 C1orf52 (ENSPCOG00000022149) #22 SYDE2 (ENSPCOG00000019185) #23 DNAI3 (ENSPCOG00000007531) #24 MCOLN3 (ENSPCOG00000021992) #25 MCOLN2 (ENSPCOG00000017147) ##25 LPAR3 (ENSPCOG00000020815) SSX2IP (ENSPCOG00000011853) CTBS (ENSPCOG00000021717) SPATA1 (ENSPCOG00000028221) ENSPCOG00000019625 ENSPCOG00000022483 DNASE2B (ENSPCOG00000020958) ENSPCOG00000014070 SAMD13 (ENSPCOG00000028743) PRKACB (ENSPCOG00000014437) TTLL7 (ENSPCOG00000017715) Bushbaby MODERN SPECIES 125 ENSOGAG00000030868 LMO4 (ENSOGAG00000002297) HS2ST1 (ENSOGAG00000026296) #7 SH3GLB1 (ENSOGAG00000009494) #9 ENSOGAG00000014165 #11 CLCA4 (ENSOGAG00000014158) #12 CLCA1 (ENSOGAG00000014152) #13 CLCA2 (ENSOGAG00000014147) #14 ODF2L (ENSOGAG00000014145) #15 COL24A1 (ENSOGAG00000010965) #16 ZNHIT6 (ENSOGAG00000010963) #18 CCN1 (ENSOGAG00000010959) #19 ENSOGAG00000033406 DDAH1 (ENSOGAG00000009978) #20 BCL10 (ENSOGAG00000009976) #21 C1orf52 (ENSOGAG00000008908) #22 SYDE2 (ENSOGAG00000008376) #23 DNAI3 (ENSOGAG00000007725) #24 MCOLN3 (ENSOGAG00000007722) #25 MCOLN2 (ENSOGAG00000007718) ##25 LPAR3 (ENSOGAG00000016851) SSX2IP (ENSOGAG00000004650) CTBS (ENSOGAG00000004649) SPATA1 (ENSOGAG00000004646) GNG5 (ENSOGAG00000004645) RPF1 (ENSOGAG00000004642) DNASE2B (ENSOGAG00000005849) ENSOGAG00000028035 SAMD13 (ENSOGAG00000005845) PRKACB (ENSOGAG00000005838) TTLL7 (ENSOGAG00000005832) Haplorrhini ANCESTRAL SPECIES 1 ENSGT00500000046198 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Simiiformes ANCESTRAL SPECIES 3 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00910000147782 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000163788 Catarrhini ANCESTRAL SPECIES 3 ENSGT00940000164507 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00910000147782 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Hominoidea ANCESTRAL SPECIES 3 ENSGT00530000063408.B #7 ENSGT00940000164507 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00940000159078 Hominidae ANCESTRAL SPECIES 3 ENSGT00530000063408.B #7 ENSGT00940000164507 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00940000159078 Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00530000063408.B #7 ENSGT00940000164507 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b.f #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00940000159078 Gorilla MODERN SPECIES ENSGGOG00000043302 #11 ENSGGOG00000043813 CLCA4 (ENSGGOG00000014623) #12 CLCA1 (ENSGGOG00000011756) #13 CLCA2 (ENSGGOG00000003746) #14 ENSGGOG00000036344 ODF2L (ENSGGOG00000039102) #15 ODF2L (ENSGGOG00000002571) #15 ENSGGOG00000022054 COL24A1 (ENSGGOG00000000424) #16 ZNHIT6 (ENSGGOG00000001289) #18 CCN1 (ENSGGOG00000006978) #19 ENSGGOG00000037302 ENSGGOG00000041543 #20 ENSGGOG00000044072 #21 C1orf52 (ENSGGOG00000027688) #22 SYDE2 (ENSGGOG00000002813) #23 DNAI3 (ENSGGOG00000024273) #24 MCOLN3 (ENSGGOG00000007413) #25 MCOLN2 (ENSGGOG00000012178) ##25 LPAR3 (ENSGGOG00000011067) SSX2IP (ENSGGOG00000002229) CTBS (ENSGGOG00000015738) ENSGGOG00000039621 ENSGGOG00000026782 RPF1 (ENSGGOG00000015862) DNASE2B (ENSGGOG00000007963) ENSGGOG00000042098 SAMD13 (ENSGGOG00000002150) ENSGGOG00000039232 ENSGGOG00000038622 Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00530000063408.B #7 ENSGT00940000164507 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b.f #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00940000159078 Pan ANCESTRAL SPECIES ENSGT00530000063408.B #7 ENSGT00940000164507 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b.f #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT00910000145621 ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT01010000224294 ENSGT00940000161169 Chimpanzee MODERN SPECIES HS2ST1 (ENSPTRG00000000927) #7 SELENOF (ENSPTRG00000046631) #8 SH3GLB1 (ENSPTRG00000000925) #9 ENSPTRG00000051840 #11 ENSPTRG00000044041 #11 CLCA4 (ENSPTRG00000000923) #12 CLCA1 (ENSPTRG00000000922) #13 CLCA2 (ENSPTRG00000000921) #14 ODF2L (ENSPTRG00000000919) #15 COL24A1 (ENSPTRG00000052159) #16 ZNHIT6 (ENSPTRG00000000917) #18 CCN1 (ENSPTRG00000000916) #19 ENSPTRG00000045650 DDAH1 (ENSPTRG00000000915) #20 BCL10 (ENSPTRG00000000914) #21 C1H1orf52 (ENSPTRG00000000913) #22 SYDE2 (ENSPTRG00000000912) #23 DNAI3 (ENSPTRG00000000910) #24 MCOLN3 (ENSPTRG00000000909) #25 MCOLN2 (ENSPTRG00000000908) ##25 LPAR3 (ENSPTRG00000000907) SSX2IP (ENSPTRG00000000906) CTBS (ENSPTRG00000000904) SPATA1 (ENSPTRG00000000903) GNG5 (ENSPTRG00000000902) RPF1 (ENSPTRG00000000901) DNASE2B (ENSPTRG00000000900) ENSPTRG00000043173 SAMD13 (ENSPTRG00000030549) ENSPTRG00000041946 ENSPTRG00000051420 Bonobo MODERN SPECIES ENSPPAG00000032573 HS2ST1 (ENSPPAG00000039539) #7 SELENOF (ENSPPAG00000034847) #8 SH3GLB1 (ENSPPAG00000037511) #9 ENSPPAG00000027864 #11 CLCA4 (ENSPPAG00000030240) #12 CLCA1 (ENSPPAG00000042810) #13 CLCA2 (ENSPPAG00000037646) #14 ODF2L (ENSPPAG00000035946) #15 COL24A1 (ENSPPAG00000031760) #16 ZNHIT6 (ENSPPAG00000044095) #18 CCN1 (ENSPPAG00000036034) #19 ENSPPAG00000008964 ENSPPAG00000032273 #20 ENSPPAG00000039334 #21 C1orf52 (ENSPPAG00000033419) #22 SYDE2 (ENSPPAG00000008094) #23 DNAI3 (ENSPPAG00000028762) #24 MCOLN3 (ENSPPAG00000018460) #25 MCOLN2 (ENSPPAG00000035292) ##25 LPAR3 (ENSPPAG00000042081) SSX2IP (ENSPPAG00000030204) CTBS (ENSPPAG00000041122) SPATA1 (ENSPPAG00000031268) ENSPPAG00000034135 RPF1 (ENSPPAG00000038610) DNASE2B (ENSPPAG00000031087) ENSPPAG00000042063 SAMD13 (ENSPPAG00000028733) ENSPPAG00000028069 PRKACB (ENSPPAG00000031832) Human MODERN SPECIES PKN2 (ENSG00000065243) LMO4 (ENSG00000143013) ENSG00000267561 HS2ST1 (ENSG00000153936) #7 SELENOF (ENSG00000183291) #8 SH3GLB1 (ENSG00000097033) #9 CLCA4 (ENSG00000016602) #12 CLCA1 (ENSG00000016490) #13 CLCA2 (ENSG00000137975) #14 ODF2L (ENSG00000122417) #15 COL24A1 (ENSG00000171502) #16 ZNHIT6 (ENSG00000117174) #18 CCN1 (ENSG00000142871) #19 DDAH1 (ENSG00000153904) #20 BCL10 (ENSG00000142867) #21 C1orf52 (ENSG00000162642) #22 SYDE2 (ENSG00000097096) #23 MCOLN3 (ENSG00000055732) #25 DNAI3 (ENSG00000162643) #24 MCOLN2 (ENSG00000153898) ##25 LPAR3 (ENSG00000171517) SSX2IP (ENSG00000117155) CTBS (ENSG00000117151) SPATA1 (ENSG00000122432) GNG5 (ENSG00000174021) RPF1 (ENSG00000117133) DNASE2B (ENSG00000137976) SAMD13 (ENSG00000203943) PRKACB (ENSG00000142875) TTLL7 (ENSG00000137941) ADGRL2 (ENSG00000117114) Orangutan MODERN SPECIES LMO4 (ENSPPYG00000035178) HS2ST1 (ENSPPYG00000001183) #7 ENSPPYG00000041718 #8 SH3GLB1 (ENSPPYG00000001185) #9 ENSPPYG00000039489 #11 CLCA4 (ENSPPYG00000001186) #12 CLCA1 (ENSPPYG00000001187) #13 CLCA2 (ENSPPYG00000001188) #14 ODF2L (ENSPPYG00000001189) #15 COL24A1 (ENSPPYG00000001190) #16 ZNHIT6 (ENSPPYG00000001191) #18 CCN1 (ENSPPYG00000001192) #19 DDAH1 (ENSPPYG00000001193) #20 BCL10 (ENSPPYG00000001194) #21 DNAI3 (ENSPPYG00000001197) #24 C1orf52 (ENSPPYG00000001195) #22 SYDE2 (ENSPPYG00000001196) #23 MCOLN3 (ENSPPYG00000001198) #25 MCOLN2 (ENSPPYG00000001199) ##25 LPAR3 (ENSPPYG00000001200) SSX2IP (ENSPPYG00000001201) CTBS (ENSPPYG00000001203) SPATA1 (ENSPPYG00000001204) GNG5 (ENSPPYG00000040658) RPF1 (ENSPPYG00000001206) DNASE2B (ENSPPYG00000001207) ENSPPYG00000038224 ENSPPYG00000030371 ENSPPYG00000041194 PRKACB (ENSPPYG00000001209) TTLL7 (ENSPPYG00000001210) Gibbon MODERN SPECIES 2 HS2ST1 (ENSNLEG00000010190) #7 ENSNLEG00000010186 #8 SH3GLB1 (ENSNLEG00000010180) #9 ENSNLEG00000035396 ENSNLEG00000029420 #11 CLCA4 (ENSNLEG00000010158) #12 ENSNLEG00000010178 CLCA1 (ENSNLEG00000010144) #13 CLCA2 (ENSNLEG00000010136) #14 ODF2L (ENSNLEG00000010126) #15 COL24A1 (ENSNLEG00000010050) #16 ZNHIT6 (ENSNLEG00000010042) #18 CCN1 (ENSNLEG00000010037) #19 DDAH1 (ENSNLEG00000010030) #20 ENSNLEG00000032635 #21 C1orf52 (ENSNLEG00000010021) #22 SYDE2 (ENSNLEG00000010018) #23 DNAI3 (ENSNLEG00000010010) #24 MCOLN3 (ENSNLEG00000009997) #25 MCOLN2 (ENSNLEG00000009988) ##25 LPAR3 (ENSNLEG00000009986) SSX2IP (ENSNLEG00000009961) CTBS (ENSNLEG00000009947) ENSNLEG00000009935 ENSNLEG00000009934 RPF1 (ENSNLEG00000009930) DNASE2B (ENSNLEG00000009919) ENSNLEG00000028021 SAMD13 (ENSNLEG00000009912) PRKACB (ENSNLEG00000009888) ENSNLEG00000009911 Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00940000155667 #9 ENSGT01040000240503.C.m.b ENSGT01040000240503.C.n ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00910000147782 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00940000159078 Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT01040000240503.C.m.b ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00910000147782 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398.m #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00940000159078 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000155667 #9 ENSGT01040000240503.C.m.b ENSGT01040000240503.C.n ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00910000147782 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398.m #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00940000159078 Macaca ANCESTRAL SPECIES ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT01040000240503.C.m.b ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00910000147782 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398.m #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00940000159078 Macaca_a ANCESTRAL SPECIES ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT01040000240503.C.m.b ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00950000182971.B.b.d.`b.b ENSGT00940000164709.a.b.b.a.b.b.a.b.a.b.a ENSGT00490000043442 #21 ENSGT00390000017398.m #22 ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.a.a.b.b ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 Rhesus MODERN SPECIES LMO4 (ENSMMUG00000017383) HS2ST1 (ENSMMUG00000014056) #7 SELENOF (ENSMMUG00000016554) #8 SH3GLB1 (ENSMMUG00000013487) #9 ENSMMUG00000031997 ENSMMUG00000000813 #11 CLCA4 (ENSMMUG00000010306) #12 CLCA1 (ENSMMUG00000006836) #13 ODF2L (ENSMMUG00000001380) #15 COL24A1 (ENSMMUG00000056386) #16 ZNHIT6 (ENSMMUG00000013203) #18 CCN1 (ENSMMUG00000013197) #19 DDAH1 (ENSMMUG00000014573) #20 ENSMMUG00000063360 BCL10 (ENSMMUG00000005720) #21 C1H1orf52 (ENSMMUG00000010020) #22 ENSMMUG00000053858 SYDE2 (ENSMMUG00000062232) #23 DNAI3 (ENSMMUG00000008932) #24 MCOLN3 (ENSMMUG00000005361) #25 MCOLN2 (ENSMMUG00000015403) ##25 LPAR3 (ENSMMUG00000015402) SSX2IP (ENSMMUG00000006203) CTBS (ENSMMUG00000010127) SPATA1 (ENSMMUG00000022183) GNG5 (ENSMMUG00000022182) DNASE2B (ENSMMUG00000000406) UOX (ENSMMUG00000000404) SAMD13 (ENSMMUG00000000402) PRKACB (ENSMMUG00000003457) TTLL7 (ENSMMUG00000016591) Pig-tailed macaque MODERN SPECIES 582 SH3GLB1 (ENSMNEG00000039647) #9 ENSMNEG00000038414 ENSMNEG00000011468 ENSMNEG00000028586 #11 CLCA4 (ENSMNEG00000028107) #12 CLCA1 (ENSMNEG00000041265) #13 CLCA2 (ENSMNEG00000019614) #14 ODF2L (ENSMNEG00000043756) #15 COL24A1 (ENSMNEG00000038307) #16 ZNHIT6 (ENSMNEG00000040791) #18 ENSMNEG00000028396 CCN1 (ENSMNEG00000044316) #19 ENSMNEG00000027123 DDAH1 (ENSMNEG00000044101) #20 BCL10 (ENSMNEG00000041167) #21 ENSMNEG00000038949 #22 SYDE2 (ENSMNEG00000041819) #23 DNAI3 (ENSMNEG00000038794) #24 MCOLN3 (ENSMNEG00000041473) #25 MCOLN2 (ENSMNEG00000031675) ##25 LPAR3 (ENSMNEG00000028515) SSX2IP (ENSMNEG00000032502) CTBS (ENSMNEG00000015862) SPATA1 (ENSMNEG00000026868) ENSMNEG00000037441 RPF1 (ENSMNEG00000029462) DNASE2B (ENSMNEG00000033755) ENSMNEG00000032497 SAMD13 (ENSMNEG00000028489) PRKACB (ENSMNEG00000039211) TTLL7 (ENSMNEG00000040306) Cercopithecinae_b ANCESTRAL SPECIES 1 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT01040000240503.C.n ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00910000147782 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398.m #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00940000159078 Olive baboon MODERN SPECIES LMO4 (ENSPANG00000010805) HS2ST1 (ENSPANG00000007566) #7 SELENOF (ENSPANG00000016208) #8 SH3GLB1 (ENSPANG00000022726) #9 ENSPANG00000029610 ENSPANG00000004994 #11 CLCA4 (ENSPANG00000002387) #12 CLCA1 (ENSPANG00000002388) #13 ENSPANG00000050633 CLCA2 (ENSPANG00000030570) #14 ODF2L (ENSPANG00000025618) #15 COL24A1 (ENSPANG00000026362) #16 ZNHIT6 (ENSPANG00000004996) #18 CCN1 (ENSPANG00000007480) #19 ENSPANG00000016437 #21 C1orf52 (ENSPANG00000016435) #22 SYDE2 (ENSPANG00000010806) #23 ENSPANG00000044964 MCOLN3 (ENSPANG00000006002) #25 DNAI3 (ENSPANG00000000769) #24 MCOLN2 (ENSPANG00000000768) ##25 LPAR3 (ENSPANG00000036959) SSX2IP (ENSPANG00000025619) CTBS (ENSPANG00000005231) SPATA1 (ENSPANG00000010807) GNG5 (ENSPANG00000031198) RPF1 (ENSPANG00000010052) DNASE2B (ENSPANG00000016899) ENSPANG00000047198 ENSPANG00000011777 SAMD13 (ENSPANG00000001347) Cercopithecinae_d ANCESTRAL SPECIES 19 ENSGT00940000155667 #9 ENSGT01040000240503.C.n ENSGT00940000157555 #11 ENSGT00940000155097 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00910000147782 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398.m #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00940000159078 Sooty mangabey MODERN SPECIES 206 SH3GLB1 (ENSCATG00000040359) #9 ENSCATG00000030962 ENSCATG00000042894 #11 ENSCATG00000021850 CLCA4 (ENSCATG00000037640) #12 CLCA1 (ENSCATG00000031780) #13 CLCA2 (ENSCATG00000039534) #14 ODF2L (ENSCATG00000038042) #15 COL24A1 (ENSCATG00000039662) #16 ZNHIT6 (ENSCATG00000042430) #18 ENSCATG00000018597 CCN1 (ENSCATG00000033425) #19 ENSCATG00000017253 DDAH1 (ENSCATG00000029993) #20 BCL10 (ENSCATG00000033396) #21 C1orf52 (ENSCATG00000042900) #22 SYDE2 (ENSCATG00000036631) #23 DNAI3 (ENSCATG00000033130) #24 ENSCATG00000015242 MCOLN3 (ENSCATG00000005637) #25 MCOLN2 (ENSCATG00000031947) ##25 LPAR3 (ENSCATG00000032286) SSX2IP (ENSCATG00000041325) CTBS (ENSCATG00000040682) SPATA1 (ENSCATG00000031914) ENSCATG00000033299 RPF1 (ENSCATG00000010531) DNASE2B (ENSCATG00000035673) ENSCATG00000040810 SAMD13 (ENSCATG00000031358) PRKACB (ENSCATG00000042182) Drill MODERN SPECIES 844 ENSMLEG00000032120 ENSMLEG00000002129 #11 ENSMLEG00000031336 CLCA4 (ENSMLEG00000039886) #12 CLCA1 (ENSMLEG00000035926) #13 CLCA2 (ENSMLEG00000043718) #14 ODF2L (ENSMLEG00000031271) #15 COL24A1 (ENSMLEG00000000835) #16 ZNHIT6 (ENSMLEG00000035430) #18 ENSMLEG00000022308 CCN1 (ENSMLEG00000033648) #19 ENSMLEG00000000851 DDAH1 (ENSMLEG00000033808) #20 ENSMLEG00000036908 BCL10 (ENSMLEG00000036065) #21 ENSMLEG00000000077 #22 SYDE2 (ENSMLEG00000041726) #23 DNAI3 (ENSMLEG00000036533) #24 MCOLN3 (ENSMLEG00000034178) #25 MCOLN2 (ENSMLEG00000026041) ##25 LPAR3 (ENSMLEG00000043685) SSX2IP (ENSMLEG00000024502) CTBS (ENSMLEG00000033283) SPATA1 (ENSMLEG00000040493) GNG5 (ENSMLEG00000039037) RPF1 (ENSMLEG00000038165) ENSMLEG00000025772 Vervet Monkey MODERN SPECIES 12 PKN2 (ENSCSAG00000001444) LMO4 (ENSCSAG00000001442) HS2ST1 (ENSCSAG00000001441) #7 SELENOF (ENSCSAG00000001440) #8 SH3GLB1 (ENSCSAG00000001439) #9 ENSCSAG00000001438 #11 CLCA4 (ENSCSAG00000001436) #12 CLCA1 (ENSCSAG00000001434) #13 CLCA2 (ENSCSAG00000001433) #14 ODF2L (ENSCSAG00000001432) #15 COL24A1 (ENSCSAG00000001431) #16 ZNHIT6 (ENSCSAG00000001430) #18 CCN1 (ENSCSAG00000001429) #19 DDAH1 (ENSCSAG00000001428) #20 BCL10 (ENSCSAG00000001427) #21 ENSCSAG00000001426 #22 SYDE2 (ENSCSAG00000001425) #23 DNAI3 (ENSCSAG00000001424) #24 MCOLN3 (ENSCSAG00000001423) #25 MCOLN2 (ENSCSAG00000001422) ##25 LPAR3 (ENSCSAG00000001421) SSX2IP (ENSCSAG00000001420) CTBS (ENSCSAG00000001419) SPATA1 (ENSCSAG00000001418) ENSCSAG00000001417 DNASE2B (ENSCSAG00000001416) ENSCSAG00000001415 SAMD13 (ENSCSAG00000001414) PRKACB (ENSCSAG00000001413) TTLL7 (ENSCSAG00000001411) ADGRL2 (ENSCSAG00000001410) Cercopithecinae ANCESTRAL SPECIES 50 ENSGT00940000154453.b.a.b.b ENSGT00390000017398.n #22 ENSGT00940000163744.b ENSGT00940000153236.b.b.b.a.a.a.a.b Cercopithecinae_a ANCESTRAL SPECIES 57 ENSGT00940000154453.b.a.b.b ENSGT00390000017398.n #22 ENSGT00940000163744.b ENSGT00940000153236.b.b.b.a.a.a.a.b Macaca ANCESTRAL SPECIES 21 ENSGT00390000008152.B.a ENSGT00940000162643 ENSGT01050000244941.B.c ENSGT00950000183110.a ENSGT00550000075064 ENSGT00950000182755.b.a.a.b.a.b.a.a ENSGT00390000007479.y.b ENSGT00950000182755.b.a.a.a.a.a.b.d.a ENSGT00940000153236.a.a.b.b ENSGT00940000162960.A.c ENSGT00940000154251.A.a.b ENSGT01100000263507.D.a.a.a.b.b.b ENSGT00940000154251.A.b.b.a.b.a.b ENSGT00940000153236.b.b.b.a.a.a.a.a.a.b ENSGT00940000161765.A ENSGT00390000017398.n #22 ENSGT00940000163744.b ENSGT00940000153236.b.b.b.a.a.a.a.b Pig-tailed macaque MODERN SPECIES 158 ENSMNEG00000037128 ZNF93 (ENSMNEG00000029151) ENSMNEG00000031867 ENSMNEG00000029397 ENSMNEG00000020719 ENSMNEG00000038897 ENSMNEG00000028060 ENSMNEG00000035467 ZNF708 (ENSMNEG00000030112) ENSMNEG00000039384 ZNF493 (ENSMNEG00000031668) ENSMNEG00000037674 ENSMNEG00000028241 ENSMNEG00000044249 ENSMNEG00000038592 ENSMNEG00000028075 #22 ZNF43 (ENSMNEG00000041691) ENSMNEG00000033764 ZNF676 (ENSMNEG00000032899) Macaca_a ANCESTRAL SPECIES 1 ENSGT00390000007227.b ENSGT00390000008152.B.a ENSGT00940000162643 ENSGT01050000244941.B.c ENSGT00950000183110.a ENSGT00550000075064 ENSGT00950000182755.b.a.a.b.a.b.a.a ENSGT00950000182755.b.a.a.a.a.a.b.d.a ENSGT00940000165497.F.b.b.a.a.a ENSGT00940000153236.a.a.b.b ENSGT00940000162960.A.c ENSGT00940000154251.A.a.b ENSGT00940000153236.b.b.b.a.a.a.a.a.a.b ENSGT00940000161765.A ENSGT01100000263493.a.b.b.a.a.b.b.b.a.a ENSGT00390000017398.n #22 ENSGT00940000163744.b ENSGT00940000153236.b.b.b.a.a.a.a.b ENSGT00940000165698.B.a.b ENSGT00940000165698.A ENSGT00940000163381.a ENSGT00940000153236.b.b.b.a.a.a.a.a.a.a ENSGT00940000153236.b.a.a.b.b.a.b ENSGT00940000154251.A.b.b.a.b.b ENSGT00910000146855.h ENSGT00940000153236.b.a.a.b.b.b ENSGT00940000154915.j ENSGT00940000154453.b.a.a.a.b ENSGT00390000001014.h ENSGT00940000161356 ENSGT00390000010067 Rhesus MODERN SPECIES 10 ZNF93 (ENSMMUG00000054055) ENSMMUG00000063297 ZNF682 (ENSMMUG00000039104) ENSMMUG00000056683 ENSMMUG00000052723 ENSMMUG00000049530 ENSMMUG00000031426 ENSMMUG00000062204 ENSMMUG00000062866 ZNF708 (ENSMMUG00000003686) ZNF493 (ENSMMUG00000015533) ZNF429 (ENSMMUG00000045427) ENSMMUG00000056719 ENSMMUG00000028809 ZNF43 (ENSMMUG00000047027) ENSMMUG00000046906 #22 ENSMMUG00000061186 ENSMMUG00000040273 ZNF208 (ENSMMUG00000063815) ENSMMUG00000064561 ENSMMUG00000062521 ENSMMUG00000060408 ENSMMUG00000038943 ENSMMUG00000053961 ENSMMUG00000028816 ENSMMUG00000059643 ENSMMUG00000045698 ENSMMUG00000064404 ENSMMUG00000063831 ENSMMUG00000037794 ENSMMUG00000062694 Crab-eating macaque MODERN SPECIES 10 ENSMFAG00000003085 ENSMFAG00000037779 ENSMFAG00000061876 ENSMFAG00000033840 ZNF85 (ENSMFAG00000040852) ZNF714 (ENSMFAG00000033982) ENSMFAG00000065513 ENSMFAG00000064779 ZNF708 (ENSMFAG00000042298) ZNF493 (ENSMFAG00000034400) ENSMFAG00000065435 ENSMFAG00000049220 ENSMFAG00000063677 ZNF429 (ENSMFAG00000041253) ENSMFAG00000037086 C1orf52 (ENSMFAG00000051304) #22 ZNF43 (ENSMFAG00000060864) ENSMFAG00000044974 ENSMFAG00000042521 ENSMFAG00000032786 ENSMFAG00000065754 ENSMFAG00000037193 ENSMFAG00000037242 ENSMFAG00000044588 ENSMFAG00000030842 ENSMFAG00000001832 ZNF726 (ENSMFAG00000032109) ENSMFAG00000040354 ENSMFAG00000065576 ZNF254 (ENSMFAG00000003947) ENSMFAG00000039830 Cercopithecinae_b ANCESTRAL SPECIES 245 ENSGT00940000154453.b.a.b.b ENSGT00390000017398.n #22 Cercopithecinae_d ANCESTRAL SPECIES 348 ENSGT00940000154453.b.a.b.b ENSGT00390000017398.n #22 Drill MODERN SPECIES 739 ENSMLEG00000035225 ENSMLEG00000041483 ENSMLEG00000043107 ENSMLEG00000036989 ENSMLEG00000035682 ENSMLEG00000017218 ZNF708 (ENSMLEG00000037376) ENSMLEG00000003090 ENSMLEG00000031326 ENSMLEG00000037534 ZNF493 (ENSMLEG00000031771) ENSMLEG00000038989 ENSMLEG00000040744 ENSMLEG00000031486 ENSMLEG00000033641 #22 ENSMLEG00000040268 TRIM32 (ENSMLEG00000026607) ENSMLEG00000035253 TSPAN8 (ENSMLEG00000042492) ENSMLEG00000036938 LGR5 (ENSMLEG00000029248) ZFC3H1 (ENSMLEG00000029967) THAP2 (ENSMLEG00000034029) TMEM19 (ENSMLEG00000036183) RAB21 (ENSMLEG00000032861) TBC1D15 (ENSMLEG00000034361) TPH2 (ENSMLEG00000000709) Vervet Monkey MODERN SPECIES 25 ZNF682 (ENSCSAG00000005029) ENSCSAG00000005026 ENSCSAG00000005021 ENSCSAG00000005017 ENSCSAG00000005014 ZNF85 (ENSCSAG00000005012) ENSCSAG00000005006 ENSCSAG00000005003 ENSCSAG00000004996 ENSCSAG00000004993 ENSCSAG00000004989 ENSCSAG00000004984 ENSCSAG00000004980 ENSCSAG00000004976 ENSCSAG00000004974 ENSCSAG00000018502 #22 ZNF43 (ENSCSAG00000004971) ENSCSAG00000004967 ENSCSAG00000004964 ENSCSAG00000004956 ENSCSAG00000004945 ENSCSAG00000018504 ENSCSAG00000004935 ENSCSAG00000004928 ENSCSAG00000004924 ENSCSAG00000004919 ZNF724 (ENSCSAG00000004914) ENSCSAG00000004910 ENSCSAG00000018506 ENSCSAG00000004906 ZNF681 (ENSCSAG00000004903) Rhinopithecus DUPLICATION Rhinopithecus ANCESTRAL SPECIES 112 ENSGT00940000155667 #9 ENSGT01040000240503.C.m.b ENSGT01040000240503.C.n ENSGT00940000157555 #11 ENSGT00940000155097 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00910000147782 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398.o #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.c #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000161169 ENSGT00940000159078 Black snub-nosed monkey MODERN SPECIES 137 SELENOF (ENSRBIG00000026319) #8 SH3GLB1 (ENSRBIG00000027795) #9 ENSRBIG00000043193 ENSRBIG00000040098 #11 ENSRBIG00000039377 CLCA4 (ENSRBIG00000031752) #12 CLCA1 (ENSRBIG00000043230) #13 CLCA2 (ENSRBIG00000031853) #14 ODF2L (ENSRBIG00000040478) #15 COL24A1 (ENSRBIG00000040549) #16 ZNHIT6 (ENSRBIG00000001418) #18 ENSRBIG00000029091 CCN1 (ENSRBIG00000038743) #19 DDAH1 (ENSRBIG00000034663) #20 BCL10 (ENSRBIG00000044051) #21 ENSRBIG00000032729 #22 SYDE2 (ENSRBIG00000034172) #23 DNAI3 (ENSRBIG00000034137) #24 ENSRBIG00000035958 #25 MCOLN2 (ENSRBIG00000032726) ##25 Golden snub-nosed monkey MODERN SPECIES 2362 ENSRROG00000028931 #16 ZNHIT6 (ENSRROG00000028580) #18 CCN1 (ENSRROG00000028951) #19 DDAH1 (ENSRROG00000009892) #20 BCL10 (ENSRROG00000044289) #21 ENSRROG00000027907 #22 SYDE2 (ENSRROG00000029434) #23 DNAI3 (ENSRROG00000030691) #24 ENSRROG00000040243 #25 MCOLN2 (ENSRROG00000036998) ##25 ENSRROG00000035313 SSX2IP (ENSRROG00000043233) CTBS (ENSRROG00000027909) SPATA1 (ENSRROG00000040432) GNG5 (ENSRROG00000041242) RPF1 (ENSRROG00000038090) ENSRROG00000036333 DNASE2B (ENSRROG00000037799) ENSRROG00000023758 SAMD13 (ENSRROG00000042230) PRKACB (ENSRROG00000022851) Rhinopithecus ANCESTRAL SPECIES 787 ENSGT00940000154453.b.a.b.b.b ENSGT00390000017398.p #22 ENSGT00940000163744.b ENSGT00940000153236.b.b.b.a.a.a.a.b Black snub-nosed monkey MODERN SPECIES 2714 ENSRBIG00000028719 #22 Golden snub-nosed monkey MODERN SPECIES 1656 ZNF429 (ENSRROG00000044782) ENSRROG00000042661 ENSRROG00000032726 ENSRROG00000042229 ENSRROG00000042207 #22 ZNF43 (ENSRROG00000029715) ENSRROG00000041485 ENSRROG00000028857 Platyrrhini ANCESTRAL SPECIES ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00910000147782 ENSGT00940000155151.b #19 ENSGT00960000186836 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000161169 Cebidae ANCESTRAL SPECIES 1 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00910000147782 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b ENSGT00940000161169 Marmoset DUPLICATION Marmoset MODERN SPECIES 19 HS2ST1 (ENSCJAG00000038902) #7 ENSCJAG00000074244 SELENOF (ENSCJAG00000038701) #8 ENSCJAG00000072388 SH3GLB1 (ENSCJAG00000007335) #9 ENSCJAG00000007329 #11 CLCA4 (ENSCJAG00000007319) #12 CLCA1 (ENSCJAG00000007285) #13 CLCA2 (ENSCJAG00000007251) #14 ODF2L (ENSCJAG00000007184) #15 COL24A1 (ENSCJAG00000007060) #16 ZNHIT6 (ENSCJAG00000007041) #18 CCN1 (ENSCJAG00000012726) #19 DDAH1 (ENSCJAG00000040455) #20 BCL10 (ENSCJAG00000052966) #21 ENSCJAG00000007022 #22 DNAI3 (ENSCJAG00000006895) #24 SYDE2 (ENSCJAG00000007003) #23 MCOLN2 (ENSCJAG00000006843) ##25 LPAR3 (ENSCJAG00000039205) SSX2IP (ENSCJAG00000007456) CTBS (ENSCJAG00000007444) SPATA1 (ENSCJAG00000007432) ENSCJAG00000087345 RPF1 (ENSCJAG00000007400) DNASE2B (ENSCJAG00000007380) ENSCJAG00000007377 SAMD13 (ENSCJAG00000038186) PRKACB (ENSCJAG00000007331) TTLL7 (ENSCJAG00000007255) ENSCJAG00000073777 Marmoset MODERN SPECIES 21 KCNA5 (ENSCJAG00000068399) KCNA1 (ENSCJAG00000068371) KCNA6 (ENSCJAG00000061475) ENSCJAG00000075610 ENSCJAG00000001647 ENSCJAG00000001628 FGF6 (ENSCJAG00000001613) FGF23 (ENSCJAG00000069632) TIGAR (ENSCJAG00000040111) CCND2 (ENSCJAG00000001593) ENSCJAG00000001586 ENSCJAG00000021822 PARP11 (ENSCJAG00000001570) ENSCJAG00000082222 CRACR2A (ENSCJAG00000018917) ENSCJAG00000063173 #22 PRMT8 (ENSCJAG00000018891) ENSCJAG00000018882 TEAD4 (ENSCJAG00000018796) ENSCJAG00000085073 FOXM1 (ENSCJAG00000018781) RHNO1 (ENSCJAG00000018790) TEX52 (ENSCJAG00000018779) NRIP2 (ENSCJAG00000083523) ITFG2 (ENSCJAG00000018765) FKBP4 (ENSCJAG00000018746) ENSCJAG00000006744 ENSCJAG00000076932 ENSCJAG00000064493 ENSCJAG00000079693 CACNA1C (ENSCJAG00000000732) Cebidae_a ANCESTRAL SPECIES ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00910000147782 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT00390000013931.a.a ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.c.b ENSGT00940000153231.B.w ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00910000147804 ENSGT00530000063936.b Bolivian squirrel monkey MODERN SPECIES 45 CLCA4 (ENSSBOG00000029808) #12 CLCA1 (ENSSBOG00000031532) #13 CLCA2 (ENSSBOG00000034114) #14 ODF2L (ENSSBOG00000019975) #15 COL24A1 (ENSSBOG00000028125) #16 ZNHIT6 (ENSSBOG00000026850) #18 ENSSBOG00000030704 CCN1 (ENSSBOG00000018139) #19 DDAH1 (ENSSBOG00000029891) #20 ENSSBOG00000021699 BCL10 (ENSSBOG00000032733) #21 C1orf52 (ENSSBOG00000023463) #22 ENSSBOG00000031654 SYDE2 (ENSSBOG00000032922) #23 DNAI3 (ENSSBOG00000020387) #24 MCOLN3 (ENSSBOG00000031702) #25 MCOLN2 (ENSSBOG00000019614) ##25 LPAR3 (ENSSBOG00000022469) SSX2IP (ENSSBOG00000030187) CTBS (ENSSBOG00000029974) SPATA1 (ENSSBOG00000032732) ENSSBOG00000025678 RPF1 (ENSSBOG00000020439) ENSSBOG00000029709 DNASE2B (ENSSBOG00000036044) ENSSBOG00000023319 SAMD13 (ENSSBOG00000035540) Capuchin MODERN SPECIES 261 HS2ST1 (ENSCCAG00000026104) #7 SELENOF (ENSCCAG00000033446) #8 ENSCCAG00000031456 ENSCCAG00000000976 #11 SH3GLB1 (ENSCCAG00000029842) #9 ENSCCAG00000035676 #11 CLCA4 (ENSCCAG00000027130) #12 CLCA1 (ENSCCAG00000032498) #13 CLCA2 (ENSCCAG00000022983) #14 ODF2L (ENSCCAG00000036639) #15 COL24A1 (ENSCCAG00000026567) #16 ZNHIT6 (ENSCCAG00000035034) #18 CCN1 (ENSCCAG00000022293) #19 DDAH1 (ENSCCAG00000031737) #20 BCL10 (ENSCCAG00000036016) #21 C1orf52 (ENSCCAG00000022391) #22 ENSCCAG00000032916 SYDE2 (ENSCCAG00000011416) #23 DNAI3 (ENSCCAG00000034917) #24 MCOLN3 (ENSCCAG00000024680) #25 MCOLN2 (ENSCCAG00000021351) ##25 LPAR3 (ENSCCAG00000022881) SSX2IP (ENSCCAG00000025619) CTBS (ENSCCAG00000034072) SPATA1 (ENSCCAG00000033239) ENSCCAG00000025681 RPF1 (ENSCCAG00000038077) DNASE2B (ENSCCAG00000031055) ENSCCAG00000021796 ENSCCAG00000024817 SAMD13 (ENSCCAG00000024780) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1222 CCN1 (ENSANAG00000021011) #19 ENSANAG00000020702 DDAH1 (ENSANAG00000036589) #20 BCL10 (ENSANAG00000032404) #21 ENSANAG00000019838 #22 SYDE2 (ENSANAG00000037204) #23 ENSANAG00000037128 DNAI3 (ENSANAG00000033437) #24 MCOLN3 (ENSANAG00000014281) #25 MCOLN2 (ENSANAG00000035061) ##25 LPAR3 (ENSANAG00000021394) SSX2IP (ENSANAG00000028935) ENSANAG00000034138 SPATA1 (ENSANAG00000028513) GNG5 (ENSANAG00000037163) RPF1 (ENSANAG00000035706) ENSANAG00000035698 DNASE2B (ENSANAG00000034051) ENSANAG00000025747 ENSANAG00000033696 Mas night monkey MODERN SPECIES 1003 ENSANAG00000030795 ENSANAG00000026597 HTR1E (ENSANAG00000020260) CGA (ENSANAG00000025451) ZNF292 (ENSANAG00000023824) SMIM8 (ENSANAG00000031913) C6orf163 (ENSANAG00000020423) ENSANAG00000036217 SLC35A1 (ENSANAG00000023414) RARS2 (ENSANAG00000027711) ORC3 (ENSANAG00000038422) AKIRIN2 (ENSANAG00000030566) ENSANAG00000027715 SPACA1 (ENSANAG00000022733) ENSANAG00000022019 #22 RNGTT (ENSANAG00000022118) ENSANAG00000001631 ENSANAG00000027710 SRSF12 (ENSANAG00000023238) PM20D2 (ENSANAG00000028063) GABRR2 (ENSANAG00000027407) UBE2J1 (ENSANAG00000023523) RRAGD (ENSANAG00000023087) ENSANAG00000035891 ANKRD6 (ENSANAG00000035580) LYRM2 (ENSANAG00000033734) MDN1 (ENSANAG00000034484) CASP8AP2 (ENSANAG00000021679) GJA10 (ENSANAG00000024124) BACH2 (ENSANAG00000020444) Tarsier MODERN SPECIES 5619 COL24A1 (ENSTSYG00000007947) #16 ZNHIT6 (ENSTSYG00000031685) #18 CCN1 (ENSTSYG00000004929) #19 DDAH1 (ENSTSYG00000036511) #20 BCL10 (ENSTSYG00000010772) #21 CUNH1orf52 (ENSTSYG00000035862) #22 SYDE2 (ENSTSYG00000008423) #23 WDR63 (ENSTSYG00000008813) #24 MCOLN3 (ENSTSYG00000008984) #25 MCOLN2 (ENSTSYG00000005578) ##25 LPAR3 (ENSTSYG00000010815) SSX2IP (ENSTSYG00000004276) CTBS (ENSTSYG00000010036) SPATA1 (ENSTSYG00000010029) ENSTSYG00000027698 RPF1 (ENSTSYG00000009961) DNASE2B (ENSTSYG00000013883) ENSTSYG00000028321 SAMD13 (ENSTSYG00000000398) Atlantogenata ANCESTRAL SPECIES 11 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b ENSGT00940000163788 ENSGT00940000161169 Xenarthra ANCESTRAL SPECIES 194 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 Armadillo MODERN SPECIES 4216 LMO4 (ENSDNOG00000047628) HS2ST1 (ENSDNOG00000049698) #7 SELENOF (ENSDNOG00000004701) #8 SH3GLB1 (ENSDNOG00000039119) #9 ENSDNOG00000040224 #11 CLCA4 (ENSDNOG00000001159) #12 CLCA1 (ENSDNOG00000001155) #13 CLCA2 (ENSDNOG00000001152) #14 ODF2L (ENSDNOG00000010680) #15 ENSDNOG00000044659 COL24A1 (ENSDNOG00000016150) #16 ZNHIT6 (ENSDNOG00000044251) #18 CCN1 (ENSDNOG00000002945) #19 DDAH1 (ENSDNOG00000035701) #20 ENSDNOG00000010048 #21 C1orf52 (ENSDNOG00000031696) #22 SYDE2 (ENSDNOG00000017951) #23 DNAI3 (ENSDNOG00000017947) #24 Sloth MODERN SPECIES 4867 BCL10 (ENSCHOG00000012878) #21 C1orf52 (ENSCHOG00000012863) #22 Afrotheria ANCESTRAL SPECIES 21 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00940000161169 ENSGT00940000159078 Afrotheria_a ANCESTRAL SPECIES 20 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000160416 #12 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00940000161169 ENSGT00940000159078 Elephant MODERN SPECIES 145 GTF2B (ENSLAFG00000006102) PKN2 (ENSLAFG00000010893) LMO4 (ENSLAFG00000017723) HS2ST1 (ENSLAFG00000011894) #7 SH3GLB1 (ENSLAFG00000017719) #9 ENSLAFG00000007726 #11 CLCA4 (ENSLAFG00000014375) #12 CLCA1 (ENSLAFG00000006917) #13 CLCA2 (ENSLAFG00000006916) #14 ODF2L (ENSLAFG00000010775) #15 ENSLAFG00000012889 #16 ZNHIT6 (ENSLAFG00000032483) #18 CCN1 (ENSLAFG00000022979) #19 DDAH1 (ENSLAFG00000010363) #20 BCL10 (ENSLAFG00000003648) #21 C1orf52 (ENSLAFG00000007499) #22 SYDE2 (ENSLAFG00000016031) #23 DNAI3 (ENSLAFG00000016022) #24 MCOLN3 (ENSLAFG00000016018) #25 MCOLN2 (ENSLAFG00000029928) ##25 LPAR3 (ENSLAFG00000010892) SSX2IP (ENSLAFG00000013496) CTBS (ENSLAFG00000011739) SPATA1 (ENSLAFG00000013256) ENSLAFG00000007034 RPF1 (ENSLAFG00000007031) DNASE2B (ENSLAFG00000031438) ENSLAFG00000026431 ENSLAFG00000031962 PRKACB (ENSLAFG00000006544) TTLL7 (ENSLAFG00000022500) Hyrax MODERN SPECIES 10712 C1orf52 (ENSPCAG00000006794) #22 Tenrec MODERN SPECIES 15061 C1orf52 (ENSETEG00000005648) #22 Marsupialia ANCESTRAL SPECIES 3 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000154682.C.p #13 ENSGT00940000154682.C.o #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b Opossum MODERN SPECIES 1 ENSMODG00000008041 #11 SH3GLB1 (ENSMODG00000008125) #9 ENSMODG00000008134 #8 HS2ST1 (ENSMODG00000008154) #7 LMO4 (ENSMODG00000008163) ENSMODG00000048769 ENSMODG00000007456 #13 CLCA2 (ENSMODG00000000026) #14 ENSMODG00000000056 #15 ENSMODG00000000076 ENSMODG00000048730 #16 ENSMODG00000025703 #18 CCN1 (ENSMODG00000000285) #19 DDAH1 (ENSMODG00000000292) #20 BCL10 (ENSMODG00000037224) #21 C1orf52 (ENSMODG00000000302) #22 SYDE2 (ENSMODG00000000311) #23 DNAI3 (ENSMODG00000000354) #24 MCOLN3 (ENSMODG00000000378) #25 MCOLN2 (ENSMODG00000000390) ##25 LPAR3 (ENSMODG00000000401) SSX2IP (ENSMODG00000000409) CTBS (ENSMODG00000000421) SPATA1 (ENSMODG00000041648) ENSMODG00000048242 RPF1 (ENSMODG00000000452) DNASE2B (ENSMODG00000000513) ENSMODG00000000498 ENSMODG00000048125 PRKACB (ENSMODG00000000539) TTLL7 (ENSMODG00000000596) Marsupialia_b ANCESTRAL SPECIES 6 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000154682.C.p #13 ENSGT00940000154682.C.o #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b Tasmanian devil MODERN SPECIES 3 GTF2B (ENSSHAG00000005314) PKN2 (ENSSHAG00000006110) LMO4 (ENSSHAG00000026182) HS2ST1 (ENSSHAG00000004758) #7 SELENOF (ENSSHAG00000026888) #8 SH3GLB1 (ENSSHAG00000024847) #9 ENSSHAG00000030068 #13 ENSSHAG00000006437 #13 CLCA2 (ENSSHAG00000007009) #14 ODF2L (ENSSHAG00000008055) #15 ENSSHAG00000010203 ENSSHAG00000012272 #18 CCN1 (ENSSHAG00000012809) #19 DDAH1 (ENSSHAG00000031838) #20 BCL10 (ENSSHAG00000024145) #21 ENSSHAG00000028512 #22 SYDE2 (ENSSHAG00000014946) #23 DNAI3 (ENSSHAG00000015341) #24 MCOLN3 (ENSSHAG00000015722) #25 MCOLN2 (ENSSHAG00000015932) ##25 LPAR3 (ENSSHAG00000016258) SSX2IP (ENSSHAG00000017020) ENSSHAG00000017130 CTBS (ENSSHAG00000017432) SPATA1 (ENSSHAG00000017459) ENSSHAG00000024357 RPF1 (ENSSHAG00000017559) ENSSHAG00000017746 DNASE2B (ENSSHAG00000017718) ENSSHAG00000025421 SAMD13 (ENSSHAG00000023065) Diprotodontia ANCESTRAL SPECIES 7 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000154682.C.p #13 ENSGT00940000154682.C.o #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b ENSGT00940000161169 Diprotodontia_a ANCESTRAL SPECIES 3 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000157555 #11 ENSGT00940000154682.C.p #13 ENSGT00940000154682.C.o.a #13 ENSGT00940000154682.C.o.b #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000162448 #16 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b.a ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b ENSGT00940000161169 Common wonbat MODERN SPECIES 1039 ENSVURG00010009706 #13 CLCA2 (ENSVURG00010009708) #14 ODF2L (ENSVURG00010009736) #15 ENSVURG00010009753 #16 ENSVURG00010009770 #16 ENSVURG00010009785 #18 CCN1 (ENSVURG00010009801) #19 DDAH1 (ENSVURG00010009811) #20 ENSVURG00010009831 #21 C1orf52 (ENSVURG00010009839) #22 SYDE2 (ENSVURG00010009847) #23 ENSVURG00010009867 DNAI3 (ENSVURG00010009880) #24 MCOLN3 (ENSVURG00010009987) #25 MCOLN2 (ENSVURG00010009998) ##25 LPAR3 (ENSVURG00010010046) SSX2IP (ENSVURG00010010062) CTBS (ENSVURG00010010118) SPATA1 (ENSVURG00010010137) ENSVURG00010010149 RPF1 (ENSVURG00010010163) ENSVURG00010010200 DNASE2B (ENSVURG00010010227) PRKACB (ENSVURG00010010251) TTLL7 (ENSVURG00010010284) koala MODERN SPECIES 32 ENSPCIG00000014503 #8 ENSPCIG00000014505 #9 ENSPCIG00000016355 #13 ENSPCIG00000036253 #13 ENSPCIG00000007904 ##13 ENSPCIG00000036261 ENSPCIG00000010259 #13 ENSPCIG00000035533 CLCA2 (ENSPCIG00000014520) #14 ENSPCIG00000014539 #15 ENSPCIG00000006638 #16 ENSPCIG00000006645 #18 CCN1 (ENSPCIG00000006652) #19 DDAH1 (ENSPCIG00000006654) #20 BCL10 (ENSPCIG00000006659) #21 C1orf52 (ENSPCIG00000006660) #22 SYDE2 (ENSPCIG00000006661) #23 DNAI3 (ENSPCIG00000006664) #24 MCOLN3 (ENSPCIG00000002891) #25 MCOLN2 (ENSPCIG00000006673) ##25 LPAR3 (ENSPCIG00000006675) SSX2IP (ENSPCIG00000006678) CTBS (ENSPCIG00000006682) SPATA1 (ENSPCIG00000006684) ENSPCIG00000006687 RPF1 (ENSPCIG00000006692) DNASE2B (ENSPCIG00000006696) ENSPCIG00000033404 ENSPCIG00000006699 SAMD13 (ENSPCIG00000032677) PRKACB (ENSPCIG00000013356) Sauria ANCESTRAL SPECIES 7 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b Archelosauria ANCESTRAL SPECIES 9 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Cryptodira ANCESTRAL SPECIES 8 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000154284.b ##8 ENSGT00940000161655 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00940000153229.B.e ENSGT00390000002634.b ENSGT00940000153229.B.f Testudinoidea ANCESTRAL SPECIES 5 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000155667 #9 ENSGT00940000154682.C.k.b #13 ENSGT00940000161548 #14 ENSGT00530000063497.b.b #15 ENSGT00940000162448 #16 ENSGT00530000063497.b.a #15 ENSGT00940000163583 ENSGT00390000017201.j #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00940000153229.B.e ENSGT00390000002634.b ENSGT01030000235381.b Emydidae ANCESTRAL SPECIES 22 ENSGT00940000163111.a.b.a.e ENSGT00530000063936.a ENSGT00940000154382.a.a ENSGT00530000063497.b.b #15 ENSGT00940000163583 ENSGT00390000017201.j #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00940000153229.B.e ENSGT00390000002634.b ENSGT01030000235381.b Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 97 ENSTMTG00000008927 ENSTMTG00000008943 ENSTMTG00000008979 ENSTMTG00000008988 #7 ENSTMTG00000009007 ##8 ENSTMTG00000009014 #9 ENSTMTG00000009182 #13 ENSTMTG00000011441 #14 ENSTMTG00000011499 #15 ENSTMTG00000011557 #16 ENSTMTG00000011573 ENSTMTG00000011591 #18 ENSTMTG00000011673 #19 ENSTMTG00000011678 #20 ENSTMTG00000011688 ENSTMTG00000011694 #22 ENSTMTG00000011702 #23 ENSTMTG00000011718 #24 ENSTMTG00000011742 #25 ENSTMTG00000011777 ##25 ENSTMTG00000011803 ENSTMTG00000011816 ENSTMTG00000011870 ENSTMTG00000011969 ENSTMTG00000012158 ENSTMTG00000012168 ENSTMTG00000012197 ENSTMTG00000012211 ENSTMTG00000012240 ENSTMTG00000012268 ENSTMTG00000012281 Three-toed box turtle MODERN SPECIES 98 ENSTMTG00000005714 ENSTMTG00000005736 ENSTMTG00000005754 ENSTMTG00000005801 ENSTMTG00000005822 #7 ENSTMTG00000005884 ##8 ENSTMTG00000005898 #9 ENSTMTG00000006115 #13 ENSTMTG00000008084 #14 ENSTMTG00000008164 #15 ENSTMTG00000008191 ENSTMTG00000008198 #18 ENSTMTG00000008228 #19 ENSTMTG00000008240 #20 ENSTMTG00000008249 ENSTMTG00000008260 #22 ENSTMTG00000008273 #23 ENSTMTG00000008283 #24 ENSTMTG00000008305 #25 ENSTMTG00000008334 ##25 ENSTMTG00000008382 ENSTMTG00000008389 ENSTMTG00000008410 ENSTMTG00000008502 ENSTMTG00000008997 ENSTMTG00000009154 ENSTMTG00000009164 ENSTMTG00000009188 ENSTMTG00000009199 ENSTMTG00000009218 ENSTMTG00000009229 painted turtle MODERN SPECIES 17 ENSCPBG00000001200 ENSCPBG00000001197 LEPR (ENSCPBG00000001180) LEPROT (ENSCPBG00000001162) DNAJC6 (ENSCPBG00000001130) ENSCPBG00000001084 JAK1 (ENSCPBG00000001053) RAVER2 (ENSCPBG00000001015) CACHD1 (ENSCPBG00000000916) UBE2U (ENSCPBG00000000879) ROR1 (ENSCPBG00000000862) TTLL7 (ENSCPBG00000000823) CCN1 (ENSCPBG00000000725) #19 DDAH1 (ENSCPBG00000000692) #20 ENSCPBG00000000682 C1orf52 (ENSCPBG00000000673) #22 SYDE2 (ENSCPBG00000000651) #23 DNAI3 (ENSCPBG00000000595) #24 MCOLN3 (ENSCPBG00000000550) #25 MCOLN2 (ENSCPBG00000000312) ##25 LPAR3 (ENSCPBG00000000291) SSX2IP (ENSCPBG00000000257) ENSCPBG00000025916 ENSCPBG00000025915 CTBS (ENSCPBG00000025914) SPATA1 (ENSCPBG00000025913) ENSCPBG00000025912 RPF1 (ENSCPBG00000025911) ENSCPBG00000025910 DNASE2B (ENSCPBG00000025908) ENSCPBG00000025907 Testudinidae ANCESTRAL SPECIES 41 ENSGT01030000234559.a.a.b.a ENSGT00940000166147 ENSGT00390000009916 ENSGT00940000154912 ENSGT00940000160578 ENSGT00980000199422 ENSGT00940000159684.jb ENSGT00390000004692.d.a.k ENSGT00940000163111.a.b.a.e.a ENSGT00530000063936.a ENSGT00940000154382.a.a ENSGT00390000017201.j #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00940000153229.B.e ENSGT00390000002634.b ENSGT01030000235381.b Abingdon island giant tortoise MODERN SPECIES 2065 DDAH1 (ENSCABG00000000262) #20 ENSCABG00000000289 C1orf52 (ENSCABG00000000299) #22 SYDE2 (ENSCABG00000000305) #23 DNAI3 (ENSCABG00000000313) #24 MCOLN3 (ENSCABG00000000330) #25 MCOLN2 (ENSCABG00000000407) ##25 LPAR3 (ENSCABG00000000444) SSX2IP (ENSCABG00000000451) ENSCABG00000000480 ENSCABG00000000569 CTBS (ENSCABG00000000594) SPATA1 (ENSCABG00000000602) ENSCABG00000000627 RPF1 (ENSCABG00000000632) ENSCABG00000000646 DNASE2B (ENSCABG00000000718) ENSCABG00000000722 Goode s thornscrub tortoise MODERN SPECIES 22 LMO4 (ENSGEVG00005006075) HS2ST1 (ENSGEVG00005006085) #7 ENSGEVG00005006103 ENSGEVG00005006119 ##8 SH3GLB1 (ENSGEVG00005006135) #9 ENSGEVG00005006157 #13 ENSGEVG00005006251 #13 ENSGEVG00005006344 #13 CLCA2 (ENSGEVG00005006894) #14 ODF2L (ENSGEVG00005008710) #15 ENSGEVG00005008763 ZNHIT6 (ENSGEVG00005008780) #18 CCN1 (ENSGEVG00005008830) #19 DDAH1 (ENSGEVG00005008857) #20 ENSGEVG00005008877 C1orf52 (ENSGEVG00005008893) #22 SYDE2 (ENSGEVG00005008926) #23 DNAI3 (ENSGEVG00005009007) #24 MCOLN3 (ENSGEVG00005009204) #25 MCOLN2 (ENSGEVG00005009299) ##25 LPAR3 (ENSGEVG00005009383) SSX2IP (ENSGEVG00005009418) ENSGEVG00005009529 ENSGEVG00005010203 CTBS (ENSGEVG00005010771) SPATA1 (ENSGEVG00005010819) ENSGEVG00005010887 RPF1 (ENSGEVG00005010919) ENSGEVG00005010973 DNASE2B (ENSGEVG00005011013) ENSGEVG00005011038 Chinese turtle MODERN SPECIES 867 LMO4 (ENSPSIG00000015708) ENSPSIG00000001800 HS2ST1 (ENSPSIG00000015802) #7 ENSPSIG00000006665 #8 ENSPSIG00000006673 #8 SH3GLB1 (ENSPSIG00000006840) #9 CLCA1 (ENSPSIG00000007038) #13 ODF2L (ENSPSIG00000011027) #15 ENSPSIG00000012330 ZNHIT6 (ENSPSIG00000013856) #18 CCN1 (ENSPSIG00000014026) #19 DDAH1 (ENSPSIG00000014329) #20 ENSPSIG00000014531 C1orf52 (ENSPSIG00000014776) #22 SYDE2 (ENSPSIG00000014791) #23 DNAI3 (ENSPSIG00000014927) #24 MCOLN3 (ENSPSIG00000015503) #25 MCOLN2 (ENSPSIG00000015749) ##25 LPAR3 (ENSPSIG00000016421) SSX2IP (ENSPSIG00000016706) ENSPSIG00000017070 ENSPSIG00000017211 CTBS (ENSPSIG00000017282) SPATA1 (ENSPSIG00000017323) RPF1 (ENSPSIG00000017437) ENSPSIG00000017540 DNASE2B (ENSPSIG00000006801) ENSPSIG00000006858 SAMD13 (ENSPSIG00000006863) Archosauria ANCESTRAL SPECIES 11 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Aves ANCESTRAL SPECIES 7 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Neognathae ANCESTRAL SPECIES 8 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Galloanserae ANCESTRAL SPECIES 8 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Anatidae ANCESTRAL SPECIES 5 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.b ##8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Pink-footed goose MODERN SPECIES 1 GTF2B (ENSABRG00000019503) PKN2 (ENSABRG00000019497) LMO4 (ENSABRG00000019475) HS2ST1 (ENSABRG00000019463) #7 ENSABRG00000019458 ##8 SH3GLB1 (ENSABRG00000019451) #9 CLCA1 (ENSABRG00000018789) #13 CLCA2 (ENSABRG00000018718) #14 ODF2L (ENSABRG00000018706) #15 ENSABRG00000018651 ENSABRG00000018648 ZNHIT6 (ENSABRG00000018645) #18 CCN1 (ENSABRG00000018644) #19 DDAH1 (ENSABRG00000018643) #20 ENSABRG00000018642 C1orf52 (ENSABRG00000018640) #22 SYDE2 (ENSABRG00000018635) #23 DNAI3 (ENSABRG00000018607) #24 MCOLN3 (ENSABRG00000018595) #25 MCOLN2 (ENSABRG00000018585) ##25 LPAR3 (ENSABRG00000018582) SSX2IP (ENSABRG00000018577) ENSABRG00000018543 ENSABRG00000018506 CTBS (ENSABRG00000018498) ENSABRG00000018495 ENSABRG00000018492 RPF1 (ENSABRG00000018488) DNASE2B (ENSABRG00000018484) ENSABRG00000018473 SAMD13 (ENSABRG00000018468) Duck MODERN SPECIES 26 PKN2 (ENSAPLG00000014769) LMO4 (ENSAPLG00000030327) ENSAPLG00000017611 HS2ST1 (ENSAPLG00000014649) #7 ENSAPLG00000024886 ##8 SH3GLB1 (ENSAPLG00000014317) #9 ENSAPLG00000021297 #13 ENSAPLG00000004603 #14 ODF2L (ENSAPLG00000004590) #15 ENSAPLG00000031231 ENSAPLG00000022674 ZNHIT6 (ENSAPLG00000003644) #18 CCN1 (ENSAPLG00000003558) #19 DDAH1 (ENSAPLG00000017443) #20 ENSAPLG00000003517 C1orf52 (ENSAPLG00000029539) #22 SYDE2 (ENSAPLG00000003510) #23 DNAI3 (ENSAPLG00000003460) #24 MCOLN3 (ENSAPLG00000003304) #25 MCOLN2 (ENSAPLG00000003123) ##25 LPAR3 (ENSAPLG00000003113) SSX2IP (ENSAPLG00000002969) ENSAPLG00000016418 ENSAPLG00000021250 CTBS (ENSAPLG00000016415) SPATA1 (ENSAPLG00000016401) ENSAPLG00000000630 RPF1 (ENSAPLG00000016382) ENSAPLG00000016344 DNASE2B (ENSAPLG00000026479) SAMD13 (ENSAPLG00000016342) Phasianidae ANCESTRAL SPECIES 7 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Phasianidae_b ANCESTRAL SPECIES 7 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT00940000165410 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B Chicken MODERN SPECIES 37 LRRC8B (ENSGALG00010022731) KYAT3 (ENSGALG00010022877) GTF2B (ENSGALG00010022930) PKN2 (ENSGALG00010022983) LMO4 (ENSGALG00010023007) HS2ST1 (ENSGALG00010023030) #7 SELENOF (ENSGALG00010023059) #8 SH3GLB1 (ENSGALG00010023087) #9 CLCA2 (ENSGALG00010023101) #14 ODF2L (ENSGALG00010023161) #15 ENSGALG00010023195 ZNHIT6 (ENSGALG00010023210) #18 CYR61 (ENSGALG00010020677) #19 DDAH1 (ENSGALG00010024494) #20 BCL10 (ENSGALG00010020681) C1orf52 (ENSGALG00010020686) #22 SYDE2 (ENSGALG00010020753) #23 DNAI3 (ENSGALG00010020758) #24 MCOLN3 (ENSGALG00010020776) #25 MCOLN2 (ENSGALG00010020811) ##25 LPAR3 (ENSGALG00010020840) SSX2IP (ENSGALG00010021533) VTG2 (ENSGALG00010020856) ENSGALG00010020884 VTG3 (ENSGALG00010020897) CTBS (ENSGALG00010020946) GNG5 (ENSGALG00010020952) RPF1 (ENSGALG00010020957) ENSGALG00010020715 DNASE2B (ENSGALG00010024505) THAP10 (ENSGALG00010020742) Turkey MODERN SPECIES 1 LRRC8B (ENSMGAG00000008513) KYAT3 (ENSMGAG00000008515) GTF2B (ENSMGAG00000008534) PKN2 (ENSMGAG00000008542) HS2ST1 (ENSMGAG00000008617) #7 SELENOF (ENSMGAG00000008630) #8 SH3GLB1 (ENSMGAG00000008633) #9 CLCA1 (ENSMGAG00000008656) #13 CLCA2 (ENSMGAG00000017045) #14 ODF2L (ENSMGAG00000008713) #15 ENSMGAG00000018110 ZNHIT6 (ENSMGAG00000008891) #18 CCN1 (ENSMGAG00000008895) #19 DDAH1 (ENSMGAG00000008919) #20 ENSMGAG00000008930 C1orf52 (ENSMGAG00000019997) #22 SYDE2 (ENSMGAG00000008940) #23 DNAI3 (ENSMGAG00000008955) #24 MCOLN3 (ENSMGAG00000008983) #25 MCOLN2 (ENSMGAG00000009009) ##25 LPAR3 (ENSMGAG00000009028) SSX2IP (ENSMGAG00000009038) ENSMGAG00000009088 ENSMGAG00000019075 CTBS (ENSMGAG00000009191) ENSMGAG00000009196 ENSMGAG00000022687 RPF1 (ENSMGAG00000009207) ENSMGAG00000009240 DNASE2B (ENSMGAG00000009219) ENSMGAG00000020035 Japanese quail MODERN SPECIES 26 GTF2B (ENSCJPG00005008246) PKN2 (ENSCJPG00005008247) LMO4 (ENSCJPG00005008250) HS2ST1 (ENSCJPG00005008267) #7 ENSCJPG00005008274 ##8 SH3GLB1 (ENSCJPG00005008275) #9 CLCA1 (ENSCJPG00005008279) #13 CLCA2 (ENSCJPG00005008282) #14 ODF2L (ENSCJPG00005008286) #15 ENSCJPG00005008293 ENSCJPG00005008294 ZNHIT6 (ENSCJPG00005008295) #18 CCN1 (ENSCJPG00005008310) #19 DDAH1 (ENSCJPG00005008314) #20 ENSCJPG00005008315 C1orf52 (ENSCJPG00005008317) #22 SYDE2 (ENSCJPG00005008320) #23 DNAI3 (ENSCJPG00005008321) #24 MCOLN3 (ENSCJPG00005008324) #25 MCOLN2 (ENSCJPG00005008325) ##25 LPAR3 (ENSCJPG00005008331) SSX2IP (ENSCJPG00005008332) ENSCJPG00005008333 ENSCJPG00005008334 CTBS (ENSCJPG00005008336) SPATA1 (ENSCJPG00005008337) ENSCJPG00005008338 RPF1 (ENSCJPG00005008339) ENSCJPG00005008342 DNASE2B (ENSCJPG00005008343) ENSCJPG00005008346 Neognathae_b ANCESTRAL SPECIES 10 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.b ##8 ENSGT00940000161655 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Passeriformes ANCESTRAL SPECIES 8 ENSGT00940000160703 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.b ##8 ENSGT00940000161655 ENSGT00940000155667 #9 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Great tit MODERN SPECIES 28 LRRC8C (ENSPMJG00000019409) LRRC8B (ENSPMJG00000019410) KYAT3 (ENSPMJG00000019411) GTF2B (ENSPMJG00000019412) PKN2 (ENSPMJG00000019413) LMO4 (ENSPMJG00000019420) HS2ST1 (ENSPMJG00000019423) #7 ENSPMJG00000019424 ##8 SH3GLB1 (ENSPMJG00000019425) #9 ODF2L (ENSPMJG00000019426) #15 ENSPMJG00000019427 ZNHIT6 (ENSPMJG00000019428) #18 CCN1 (ENSPMJG00000019429) #19 DDAH1 (ENSPMJG00000019431) #20 ENSPMJG00000019432 C1orf52 (ENSPMJG00000019433) #22 SYDE2 (ENSPMJG00000019434) #23 DNAI3 (ENSPMJG00000019435) #24 MCOLN3 (ENSPMJG00000019436) #25 MCOLN2 (ENSPMJG00000019437) ##25 LPAR3 (ENSPMJG00000019438) SSX2IP (ENSPMJG00000019440) ENSPMJG00000019441 ENSPMJG00000019442 CTBS (ENSPMJG00000019443) ENSPMJG00000019445 RPF1 (ENSPMJG00000019446) DNASE2B (ENSPMJG00000019447) ENSPMJG00000019448 SAMD13 (ENSPMJG00000019449) ENSPMJG00000019450 Passeriformes_d ANCESTRAL SPECIES 9 ENSGT00940000154043.B ENSGT00940000159250 ENSGT00940000160703 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000155667 #9 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Flycatcher MODERN SPECIES 27 LRRC8C (ENSFALG00000028640) LRRC8B (ENSFALG00000001662) KYAT3 (ENSFALG00000001642) GTF2B (ENSFALG00000001636) PKN2 (ENSFALG00000001631) LMO4 (ENSFALG00000006303) HS2ST1 (ENSFALG00000029094) #7 ENSFALG00000027798 ##8 SH3GLB1 (ENSFALG00000006285) #9 ODF2L (ENSFALG00000006278) #15 ENSFALG00000006249 ZNHIT6 (ENSFALG00000006230) #18 CCN1 (ENSFALG00000006221) #19 DDAH1 (ENSFALG00000006215) #20 ENSFALG00000006213 C1orf52 (ENSFALG00000006212) #22 SYDE2 (ENSFALG00000024732) #23 DNAI3 (ENSFALG00000006192) #24 MCOLN3 (ENSFALG00000006184) #25 MCOLN2 (ENSFALG00000006182) ##25 LPAR3 (ENSFALG00000006179) SSX2IP (ENSFALG00000006170) ENSFALG00000006095 ENSFALG00000006054 CTBS (ENSFALG00000006047) SPATA1 (ENSFALG00000006040) ENSFALG00000025344 RPF1 (ENSFALG00000026271) ENSFALG00000006014 ENSFALG00000028997 DNASE2B (ENSFALG00000028878) Passeriformes_g ANCESTRAL SPECIES 10 ENSGT00940000154043.B ENSGT00940000159250 ENSGT00940000160703 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000155667 #9 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163111.a.b.b Passeroidea ANCESTRAL SPECIES 9 ENSGT00940000154043.B ENSGT00940000159250 ENSGT00940000160703 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000155667 #9 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Zebra finch MODERN SPECIES 30 LRRC8C (ENSTGUG00000006226) LRRC8B (ENSTGUG00000006230) KYAT3 (ENSTGUG00000006236) GTF2B (ENSTGUG00000006258) PKN2 (ENSTGUG00000006295) LMO4 (ENSTGUG00000006316) HS2ST1 (ENSTGUG00000023729) #7 ENSTGUG00000006332 ##8 ENSTGUG00000022678 SH3GLB1 (ENSTGUG00000006338) #9 ODF2L (ENSTGUG00000006364) #15 ENSTGUG00000006382 CCN1 (ENSTGUG00000006428) #19 DDAH1 (ENSTGUG00000027174) #20 ENSTGUG00000019476 C1orf52 (ENSTGUG00000025081) #22 SYDE2 (ENSTGUG00000006457) #23 DNAI3 (ENSTGUG00000006462) #24 MCOLN3 (ENSTGUG00000006482) #25 MCOLN2 (ENSTGUG00000006506) ##25 LPAR3 (ENSTGUG00000006518) SSX2IP (ENSTGUG00000006524) ENSTGUG00000006544 ENSTGUG00000029760 CTBS (ENSTGUG00000006581) SPATA1 (ENSTGUG00000028467) GNG5 (ENSTGUG00000021033) RPF1 (ENSTGUG00000006591) ENSTGUG00000006616 ENSTGUG00000025734 DNASE2B (ENSTGUG00000006605) Neognathae_c ANCESTRAL SPECIES 7 ENSGT00940000159250 ENSGT00940000160703 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b.d ENSGT00530000064273.a.b.c ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00530000063936.b Golden eagle MODERN SPECIES 3 KYAT3 (ENSACCG00020002175) GTF2B (ENSACCG00020002222) PKN2 (ENSACCG00020002254) LMO4 (ENSACCG00020002278) HS2ST1 (ENSACCG00020002293) #7 ENSACCG00020002313 ##8 SH3GLB1 (ENSACCG00020002347) #9 CLCA1 (ENSACCG00020002757) #13 ODF2L (ENSACCG00020003016) #15 ENSACCG00020003058 ENSACCG00020003084 ZNHIT6 (ENSACCG00020003123) #18 CCN1 (ENSACCG00020003153) #19 DDAH1 (ENSACCG00020003181) #20 ENSACCG00020003194 C1orf52 (ENSACCG00020003204) #22 SYDE2 (ENSACCG00020003214) #23 DNAI3 (ENSACCG00020003229) #24 MCOLN3 (ENSACCG00020003253) #25 MCOLN2 (ENSACCG00020003279) ##25 LPAR3 (ENSACCG00020003306) SSX2IP (ENSACCG00020003322) ENSACCG00020003402 ENSACCG00020003527 CTBS (ENSACCG00020003598) SPATA1 (ENSACCG00020003637) ENSACCG00020003655 RPF1 (ENSACCG00020003670) DNASE2B (ENSACCG00020003684) ENSACCG00020003719 SAMD13 (ENSACCG00020003750) Kakapo MODERN SPECIES 25 WDR47 (ENSSHBG00005005172) CLCC1 (ENSSHBG00005005164) GPSM2 (ENSSHBG00005005157) ENSSHBG00005005136 STXBP3 (ENSSHBG00005014134) ENSSHBG00005014116 HENMT1 (ENSSHBG00005014096) EEIG2 (ENSSHBG00005014073) SLC25A24 (ENSSHBG00005014056) VAV3 (ENSSHBG00005014042) NTNG1 (ENSSHBG00005014029) ZNHIT6 (ENSSHBG00005013996) #18 CCN1 (ENSSHBG00005013970) #19 DDAH1 (ENSSHBG00005013956) #20 ENSSHBG00005013944 C1orf52 (ENSSHBG00005013938) #22 SYDE2 (ENSSHBG00005013927) #23 CEP19 (ENSSHBG00005013915) PIGX (ENSSHBG00005013903) PAK2 (ENSSHBG00005013890) ENSSHBG00005013862 ENSSHBG00005013851 LTF (ENSSHBG00005013835) ENSSHBG00005013822 SLCO2A1 (ENSSHBG00005013808) RYK (ENSSHBG00005013798) AMOTL2 (ENSSHBG00005013786) SENP2 (ENSSHBG00005013766) IGF2BP2 (ENSSHBG00005013718) TRA2B (ENSSHBG00005013696) CFAP410 (ENSSHBG00005013690) Australian saltwater crocodile MODERN SPECIES 28 LRRC8B (ENSCPRG00005016862) KYAT3 (ENSCPRG00005016865) GTF2B (ENSCPRG00005016872) PKN2 (ENSCPRG00005016876) ENSCPRG00005016895 HS2ST1 (ENSCPRG00005016903) #7 ENSCPRG00005016908 ##8 SH3GLB1 (ENSCPRG00005016918) #9 CLCA2 (ENSCPRG00005016929) #14 ODF2L (ENSCPRG00005016938) #15 ENSCPRG00005016951 ENSCPRG00005016956 #18 CCN1 (ENSCPRG00005016962) #19 DDAH1 (ENSCPRG00005016967) #20 ENSCPRG00005016978 C1orf52 (ENSCPRG00005016982) #22 SYDE2 (ENSCPRG00005016985) #23 DNAI3 (ENSCPRG00005016988) #24 MCOLN3 (ENSCPRG00005016998) #25 MCOLN2 (ENSCPRG00005017018) ##25 LPAR3 (ENSCPRG00005017021) SSX2IP (ENSCPRG00005017026) ENSCPRG00005017034 ENSCPRG00005017056 CTBS (ENSCPRG00005017066) SPATA1 (ENSCPRG00005017072) ENSCPRG00005017090 RPF1 (ENSCPRG00005017093) DNASE2B (ENSCPRG00005017097) ENSCPRG00005017105 SAMD13 (ENSCPRG00005017120) Lepidosauria ANCESTRAL SPECIES 11 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.b ##8 ENSGT00940000161655 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b Episquamata ANCESTRAL SPECIES 1 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.b ##8 ENSGT00940000161655 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891.i ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b Laterata ANCESTRAL SPECIES 3 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.b ##8 ENSGT00940000161655 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891.i.b ENSGT00390000012891.j ENSGT00390000012891.i.a ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B Common wall lizard MODERN SPECIES 14 ENSPMRG00000007842 #13 ENSPMRG00000007853 #13 ENSPMRG00000007863 #13 ENSPMRG00000007879 #13 ENSPMRG00000007933 CLCA2 (ENSPMRG00000007945) #14 ENSPMRG00000007964 ODF2L (ENSPMRG00000007971) #15 ENSPMRG00000007995 ENSPMRG00000008001 ZNHIT6 (ENSPMRG00000008008) #18 ENSPMRG00000008012 CCN1 (ENSPMRG00000008016) #19 DDAH1 (ENSPMRG00000008019) #20 ENSPMRG00000008025 C1orf52 (ENSPMRG00000008029) #22 SYDE2 (ENSPMRG00000008032) #23 ENSPMRG00000008035 DNAI3 (ENSPMRG00000008062) #24 MCOLN3 (ENSPMRG00000008145) #25 MCOLN2 (ENSPMRG00000008153) ##25 LPAR3 (ENSPMRG00000008163) SSX2IP (ENSPMRG00000008172) ENSPMRG00000008194 ENSPMRG00000008223 ENSPMRG00000008232 SPATA1 (ENSPMRG00000008241) ENSPMRG00000008254 RPF1 (ENSPMRG00000008261) DNASE2B (ENSPMRG00000008269) ENSPMRG00000008278 Argentine black and white tegu MODERN SPECIES 16 LMO4 (ENSSMRG00000017414) HS2ST1 (ENSSMRG00000017412) #7 ENSSMRG00000017407 ##8 SH3GLB1 (ENSSMRG00000017405) #9 ENSSMRG00000017401 #13 ENSSMRG00000017395 #13 ENSSMRG00000017391 #13 ENSSMRG00000017379 #13 CLCA2 (ENSSMRG00000017375) #14 ODF2L (ENSSMRG00000017368) #15 ENSSMRG00000017350 ZNHIT6 (ENSSMRG00000017343) #18 CCN1 (ENSSMRG00000017342) #19 DDAH1 (ENSSMRG00000017341) #20 ENSSMRG00000017339 C1orf52 (ENSSMRG00000017338) #22 SYDE2 (ENSSMRG00000017337) #23 DNAI3 (ENSSMRG00000017268) #24 MCOLN3 (ENSSMRG00000017266) #25 MCOLN2 (ENSSMRG00000017264) ##25 LPAR3 (ENSSMRG00000017263) SSX2IP (ENSSMRG00000017258) Toxicofera ANCESTRAL SPECIES 1 ENSGT00940000160703 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891.i ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.b ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b ENSGT00940000163111.a.b.b Elapidae ANCESTRAL SPECIES 1 ENSGT00940000159250 ENSGT00940000160703 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339.x ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892.e #20 ENSGT00490000043442 #21 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891.i.c ENSGT00390000012891.i.d ENSGT00390000003298.a ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b ENSGT00940000163111.a.b.b Elapidae_a ANCESTRAL SPECIES 7 ENSGT00940000159250 ENSGT00940000160703 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339.x ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892.e #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891.i.c ENSGT00390000012891.i.d ENSGT00390000003298.a ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b ENSGT00940000163111.a.b.b Acanthophiinae ANCESTRAL SPECIES 5 ENSGT00940000160703 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339.x ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00990000213235 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892.e #20 ENSGT00940000167202 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00390000007688 ENSGT00390000012891.i.c ENSGT00390000012891.i.d ENSGT00390000003298.a ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00940000153229.B ENSGT00940000163788 ENSGT00530000063936.b ENSGT00940000163111.a.b.b Mainland tiger snake MODERN SPECIES 59 KYAT3 (ENSNSUG00000019996) GTF2B (ENSNSUG00000019997) ENSNSUG00000019998 ENSNSUG00000019999 LMO4 (ENSNSUG00000020002) HS2ST1 (ENSNSUG00000020004) #7 ENSNSUG00000020006 ##8 SH3GLB1 (ENSNSUG00000020007) #9 CLCA1 (ENSNSUG00000020008) #13 ENSNSUG00000020010 ENSNSUG00000020011 ZNHIT6 (ENSNSUG00000020012) #18 CCN1 (ENSNSUG00000020016) #19 DDAH1 (ENSNSUG00000020038) #20 ENSNSUG00000020039 C1orf52 (ENSNSUG00000020040) #22 SYDE2 (ENSNSUG00000020041) #23 ENSNSUG00000020043 #24 MCOLN3 (ENSNSUG00000020046) #25 SSX2IP (ENSNSUG00000020049) Eastern brown snake MODERN SPECIES 13 GTF2B (ENSPTXG00000006399) ENSPTXG00000006398 LMO4 (ENSPTXG00000006396) HS2ST1 (ENSPTXG00000006395) #7 ENSPTXG00000006393 ##8 SH3GLB1 (ENSPTXG00000006392) #9 CLCA1 (ENSPTXG00000006390) #13 ODF2L (ENSPTXG00000006387) #15 ENSPTXG00000006386 ENSPTXG00000006384 ENSPTXG00000006383 ZNHIT6 (ENSPTXG00000006382) #18 CCN1 (ENSPTXG00000006381) #19 DDAH1 (ENSPTXG00000006379) #20 ENSPTXG00000006378 C1orf52 (ENSPTXG00000006377) #22 SYDE2 (ENSPTXG00000006376) #23 DNAI3 (ENSPTXG00000006375) #24 MCOLN3 (ENSPTXG00000006374) #25 MCOLN2 (ENSPTXG00000006373) ##25 LPAR3 (ENSPTXG00000006372) SSX2IP (ENSPTXG00000006371) ENSPTXG00000006370 ENSPTXG00000006369 ENSPTXG00000006367 SPATA1 (ENSPTXG00000006366) ENSPTXG00000006365 RPF1 (ENSPTXG00000006364) ENSPTXG00000006359 ENSPTXG00000006358 SAMD13 (ENSPTXG00000006357) Blue-lipped sea krait MODERN SPECIES 7441 ENSLLTG00000018005 C1orf52 (ENSLLTG00000018007) #22 Indian cobra MODERN SPECIES 2 KYAT3 (ENSNNAG00000002457) GTF2B (ENSNNAG00000002447) PKN2 (ENSNNAG00000002402) LMO4 (ENSNNAG00000002380) HS2ST1 (ENSNNAG00000002365) #7 ENSNNAG00000002348 ##8 SH3GLB1 (ENSNNAG00000002326) #9 CLCA1 (ENSNNAG00000002295) #13 ODF2L (ENSNNAG00000002277) #15 ENSNNAG00000002265 ENSNNAG00000002256 ENSNNAG00000002249 #18 CCN1 (ENSNNAG00000002243) #19 DDAH1 (ENSNNAG00000002237) #20 BCL10 (ENSNNAG00000002231) #21 C1orf52 (ENSNNAG00000002225) #22 SYDE2 (ENSNNAG00000002219) #23 DNAI3 (ENSNNAG00000002193) #24 MCOLN3 (ENSNNAG00000002119) #25 MCOLN2 (ENSNNAG00000002081) ##25 LPAR3 (ENSNNAG00000002065) SSX2IP (ENSNNAG00000002055) ENSNNAG00000002040 ENSNNAG00000002030 ENSNNAG00000002026 ENSNNAG00000002018 ENSNNAG00000002012 RPF1 (ENSNNAG00000002000) ENSNNAG00000001944 ENSNNAG00000001919 ENSNNAG00000001912 Lizard MODERN SPECIES 808 ENSACAG00000013228 ZNHIT6 (ENSACAG00000013213) #18 CCN1 (ENSACAG00000013180) #19 ENSACAG00000036798 DDAH1 (ENSACAG00000013151) #20 ENSACAG00000043057 ENSACAG00000013137 C1orf52 (ENSACAG00000034963) #22 SYDE2 (ENSACAG00000013112) #23 DNAI3 (ENSACAG00000013029) #24 MCOLN3 (ENSACAG00000012969) #25 ENSACAG00000023545 MCOLN2 (ENSACAG00000012899) ##25 ENSACAG00000027083 LPAR3 (ENSACAG00000041455) SSX2IP (ENSACAG00000005540) ENSACAG00000041285 ENSACAG00000040254 ENSACAG00000005676 ENSACAG00000029634 SPATA1 (ENSACAG00000029579) ENSACAG00000005743 RPF1 (ENSACAG00000005753) tuatara MODERN SPECIES 1845 ENSSPUG00000015617 #13 CLCA2 (ENSSPUG00000015791) #14 ODF2L (ENSSPUG00000016411) #15 ENSSPUG00000016449 ENSSPUG00000016457 #18 CCN1 (ENSSPUG00000016465) #19 ENSSPUG00000016472 DDAH1 (ENSSPUG00000016477) #20 ENSSPUG00000016484 C1orf52 (ENSSPUG00000016490) #22 SYDE2 (ENSSPUG00000016501) #23 DNAI3 (ENSSPUG00000016535) #24 MCOLN3 (ENSSPUG00000016549) #25 MCOLN2 (ENSSPUG00000016595) ##25 LPAR3 (ENSSPUG00000016634) SSX2IP (ENSSPUG00000016641) CTBS (ENSSPUG00000016662) SPATA1 (ENSSPUG00000016732) ENSSPUG00000016754 RPF1 (ENSSPUG00000016759) ENSSPUG00000016791 SAMD13 (ENSSPUG00000016886) ENSSPUG00000016893 ENSSPUG00000016912 TTLL7 (ENSSPUG00000016955) Anura ANCESTRAL SPECIES ENSGT00390000017398 #22 Leishan spiny toad MODERN SPECIES 1131 C1orf52 (ENSLLEG00000025164) #22 Coelacanth MODERN SPECIES 406 ZNHIT6 (ENSLACG00000017347) #18 CCN1 (ENSLACG00000017295) #19 ENSLACG00000017143 DDAH1 (ENSLACG00000017127) #20 ENSLACG00000017073 ENSLACG00000016954 #22 SYDE2 (ENSLACG00000016777) #23 DNAI3 (ENSLACG00000016526) #24 MCOLN3 (ENSLACG00000016339) #25 MCOLN2 (ENSLACG00000016212) ##25 ENSLACG00000015737 SSX2IP (ENSLACG00000015496) ENSLACG00000015239 ENSLACG00000014924 CTBS (ENSLACG00000014703) SPATA1 (ENSLACG00000014462) RPF1 (ENSLACG00000014263) uox (ENSLACG00000013884) prkacbb (ENSLACG00000012597) ASF1A (ENSLACG00000012211) TTLL7 (ENSLACG00000010892) Actinopterygii ANCESTRAL SPECIES 57 ENSGT00940000155827 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000165852 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00940000163785.b ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.a.f ENSGT00390000002634.b ENSGT00940000153229.B Neopterygii ANCESTRAL SPECIES 9 ENSGT00390000006671 ENSGT00940000154339 ENSGT00940000157730 ENSGT00530000063408.B #7 ENSGT00940000154284.a #8 ENSGT00940000155667 #9 ENSGT00940000154682.C #13 ENSGT00940000161548 #14 ENSGT01030000234583.a.a.d ENSGT00530000063497.b #15 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b #19 ENSGT00940000157892 #20 ENSGT00940000165852 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a #25 ENSGT00950000183036.a.b ##25 ENSGT01050000244941.B.d ENSGT00940000163785.b ENSGT00390000007688 ENSGT00530000064273.a.b ENSGT00390000012891 ENSGT00390000003298 ENSGT01100000263525.a.b.b ENSGT00940000153231.B ENSGT00390000002634.a.f ENSGT00390000002634.b ENSGT00940000153229.B Osteoglossocephalai ANCESTRAL SPECIES 224 ENSGT00940000159474 ENSGT00490000043472 ENSGT00390000008549 ENSGT00390000008338 ENSGT00940000166722 ENSGT00390000010922 ENSGT00510000049371 ENSGT00390000007658 ENSGT00530000063790.a ENSGT00940000167622 ENSGT00940000177205 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b.d #19 ENSGT00940000157892 #20 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 Osteoglossiformes ANCESTRAL SPECIES 5 ENSGT00940000156945 ENSGT00940000156450.c ENSGT00490000043472 ENSGT00390000008549 ENSGT00610000087472 ENSGT00390000016298.b ENSGT00390000010922 ENSGT00510000049371 ENSGT00390000007658 ENSGT00530000063790.a.c ENSGT00940000167622 ENSGT00940000177205 ENSGT00940000163583 ENSGT00940000155151.b.d.b #19 ENSGT00940000157892.o #20 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a.c #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT01050000244941.B.d.g ENSGT00940000163785.b Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 24 TTC22 (ENSSFOG00015000104) lurap1 (ENSSFOG00015021841) ENSSFOG00015021838 ENSSFOG00015029857 ccn1 (ENSSFOG00015021810) #19 DDAH1 (ENSSFOG00015031069) #20 zgc:65873 (ENSSFOG00015021776) #22 SYDE2 (ENSSFOG00015021765) #23 DNAI3 (ENSSFOG00015021746) #24 MCOLN3 (ENSSFOG00015027729) #25 lurap1 (ENSSFOG00015028685) ENSSFOG00015032083 ENSSFOG00015025693 ccn1 (ENSSFOG00015032652) #19 DDAH1 (ENSSFOG00015025117) #20 zgc:65873 (ENSSFOG00015025926) #22 SYDE2 (ENSSFOG00015031292) #23 DNAI3 (ENSSFOG00015024577) #24 MCOLN3 (ENSSFOG00015021732) #25 lpar3 (ENSSFOG00015021723) adgrl4 (ENSSFOG00015021705) ENSSFOG00015021688 ADGRL2 (ENSSFOG00015021664) ttll7 (ENSSFOG00015021593) ENSSFOG00015025219 samd13 (ENSSFOG00015031748) uox (ENSSFOG00015021531) DNASE2B (ENSSFOG00015021519) rpf1 (ENSSFOG00015021492) ctbs (ENSSFOG00015028122) ENSSFOG00015027737 Asian bonytongue MODERN SPECIES 24 DAB1 (ENSSFOG00015001799) PRKAA2 (ENSSFOG00015033063) PLPP3 (ENSSFOG00015001691) ENSSFOG00015001398 PCSK9 (ENSSFOG00015000263) bsnd (ENSSFOG00015000216) ENSSFOG00015030116 pars2 (ENSSFOG00015000170) ttc4 (ENSSFOG00015000155) TTC22 (ENSSFOG00015000104) lurap1 (ENSSFOG00015021841) ENSSFOG00015021838 ENSSFOG00015029857 ccn1 (ENSSFOG00015021810) #19 DDAH1 (ENSSFOG00015031069) #20 zgc:65873 (ENSSFOG00015021776) #22 SYDE2 (ENSSFOG00015021765) #23 DNAI3 (ENSSFOG00015021746) #24 MCOLN3 (ENSSFOG00015027729) #25 lurap1 (ENSSFOG00015028685) ENSSFOG00015032083 ENSSFOG00015025693 ccn1 (ENSSFOG00015032652) #19 DDAH1 (ENSSFOG00015025117) #20 zgc:65873 (ENSSFOG00015025926) #22 SYDE2 (ENSSFOG00015031292) #23 DNAI3 (ENSSFOG00015024577) #24 MCOLN3 (ENSSFOG00015021732) #25 lpar3 (ENSSFOG00015021723) adgrl4 (ENSSFOG00015021705) ENSSFOG00015021688 P. kingsleyae MODERN SPECIES 462 PCSK9 (ENSPKIG00000001404) bsnd (ENSPKIG00000001386) si:dkeyp-51f12.2 (ENSPKIG00000001367) ENSPKIG00000001354 pars2 (ENSPKIG00000001336) ttc4 (ENSPKIG00000001315) TTC22 (ENSPKIG00000001299) lurap1 (ENSPKIG00000001285) ENSPKIG00000001270 ENSPKIG00000001254 ENSPKIG00000001234 ccn1 (ENSPKIG00000001209) #19 DDAH1 (ENSPKIG00000001160) #20 zgc:65873 (ENSPKIG00000001140) #22 SYDE2 (ENSPKIG00000025411) #23 Clupeocephala ANCESTRAL SPECIES 108 ENSGT00390000018600 ENSGT00940000155190.bb.a ENSGT00940000156301.a.a ENSGT00940000174981 ENSGT00940000154396.b.b.a ENSGT00940000156209 ENSGT00390000010922 ENSGT00510000049371 ENSGT00390000007658 ENSGT00530000063790.a.a ENSGT00940000177205 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b.d #19 ENSGT00940000157892 #20 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 Euteleosteomorpha ANCESTRAL SPECIES 70 ENSGT00390000018600 ENSGT00940000155190.bb.a ENSGT00940000156301.a.a ENSGT00940000174981 ENSGT00940000154396.b.b.a ENSGT00940000156209 ENSGT00390000010922 ENSGT00510000049371 ENSGT00390000007658 ENSGT00530000063790.a.a ENSGT00940000177205 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b.d #19 ENSGT00940000157892 #20 ENSGT00390000017398 #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00390000004674.j ENSGT00940000157064.a.b.a ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 ENSGT00940000156132.h ENSGT00940000164927.a ENSGT00390000015318.b ENSGT00940000156539 Acanthomorphata ANCESTRAL SPECIES 116 ENSGT00390000017398 #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00460000041630 ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00390000004674.j Euacanthomorphacea ANCESTRAL SPECIES 31 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00510000048988 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00960000186843 ENSGT01060000249321 ENSGT00940000164867.b Percomorphaceae ANCESTRAL SPECIES 32 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00960000186843 ENSGT01060000249321 ENSGT00940000164867.b Tiger tail seahorse MODERN SPECIES 439 gpc1a (ENSHCOG00000006094) ENSHCOG00000006053 si:ch211-262h13.5 (ENSHCOG00000005260) TMEM125 (ENSHCOG00000005256) ap1m3 (ENSHCOG00000005248) tie1 (ENSHCOG00000005202) mpl (ENSHCOG00000005081) DDAH1 (ENSHCOG00000005020) #20 ccn1 (ENSHCOG00000005011) #19 ENSHCOG00000005003 #18 ENSHCOG00000004997 ENSHCOG00000004991 ENSHCOG00000000129 ENSHCOG00000004962 zgc:65873 (ENSHCOG00000004950) #22 SYDE2 (ENSHCOG00000004933) #23 ENSHCOG00000004924 #24 MCOLN3 (ENSHCOG00000004907) #25 ENSHCOG00000004880 ebna1bp2 (ENSHCOG00000004832) cfap144 (ENSHCOG00000004803) ENSHCOG00000004782 lrp8 (ENSHCOG00000004760) ENSHCOG00000004649 usp1 (ENSHCOG00000004640) DOCK7 (ENSHCOG00000004631) angptl3 (ENSHCOG00000004552) atg4c (ENSHCOG00000000125) foxd3 (ENSHCOG00000004520) alg6 (ENSHCOG00000004514) Percomorphaceae_B ANCESTRAL SPECIES 9 ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000177205 ENSGT00940000159308.kb ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 Ovalentaria ANCESTRAL SPECIES 9 ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000177205 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00960000186843 ENSGT00960000186833 ENSGT01060000249321 ENSGT00940000164867.b Atherinomorphae ANCESTRAL SPECIES 7 ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000177205 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00960000186843 ENSGT00960000186833 ENSGT01060000249321 ENSGT00940000164867.b Cyprinodontiformes ANCESTRAL SPECIES 7 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00960000186843 ENSGT00960000186833 ENSGT01060000249321 ENSGT00940000164867.b Aplocheiloidei ANCESTRAL SPECIES 3 ENSGT00940000155661 ENSGT00910000144243 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Mangrove rivulus MODERN SPECIES 53 usp1 (ENSKMAG00000011067) ENSKMAG00000011044 lrp8 (ENSKMAG00000011018) dmrt2b (ENSKMAG00000010995) ENSKMAG00000010983 ebna1bp2 (ENSKMAG00000010961) TMEM125 (ENSKMAG00000010948) ap1m3 (ENSKMAG00000010897) tie1 (ENSKMAG00000010849) mpl (ENSKMAG00000010809) DDAH1 (ENSKMAG00000010777) #20 ccn1 (ENSKMAG00000010746) #19 ZNHIT6 (ENSKMAG00000010697) #18 ENSKMAG00000010681 ENSKMAG00000010619 zgc:65873 (ENSKMAG00000010592) #22 SYDE2 (ENSKMAG00000010573) #23 ENSKMAG00000010551 #24 MCOLN3 (ENSKMAG00000010526) #25 ENSKMAG00000010485 si:ch211-262h13.5 (ENSKMAG00000010466) EPHB1 (ENSKMAG00000010423) gpc1a (ENSKMAG00000010389) gpc5b (ENSKMAG00000010332) nasp (ENSKMAG00000010249) LRRC7 (ENSKMAG00000009999) ENSKMAG00000009808 MELTF (ENSKMAG00000009751) NCBP2AS2 (ENSKMAG00000009736) fkbp2 (ENSKMAG00000009726) ncbp2 (ENSKMAG00000009686) Turquoise killifish MODERN SPECIES 1626 CU570976.1 (ENSNFUG00015025343) lrp8 (ENSNFUG00015025324) ENSNFUG00015025317 dmrt2b (ENSNFUG00015025316) ebna1bp2 (ENSNFUG00015025312) TMEM125 (ENSNFUG00015025311) AP1M3 (ENSNFUG00015025305) ENSNFUG00015025297 TIE1 (ENSNFUG00015025290) mpl (ENSNFUG00015025288) DDAH1 (ENSNFUG00015025287) #20 ENSNFUG00015025286 CYR61 (ENSNFUG00015025284) #19 ZNHIT6 (ENSNFUG00015025282) #18 ENSNFUG00015025279 C1ORF52 (ENSNFUG00015025277) #22 SYDE2 (ENSNFUG00015025275) #23 DNAI3 (ENSNFUG00015025273) #24 ENSNFUG00015025272 MCOLN3 (ENSNFUG00015025271) #25 ENSNFUG00015025268 si:ch211-262h13.5 (ENSNFUG00015025264) ENSNFUG00015025262 EPHB1 (ENSNFUG00015025213) Nfu_g_1_002423 (ENSNFUG00015025199) nasp (ENSNFUG00015025195) ENSNFUG00015025194 ENSNFUG00015025192 LRRC7 (ENSNFUG00015025160) ENSNFUG00015024260 MELTF (ENSNFUG00015024114) Cyprinodontoidei ANCESTRAL SPECIES 29 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00960000186843 ENSGT00960000186833 ENSGT01060000249321 ENSGT00940000164867.b Poeciliinae ANCESTRAL SPECIES 7 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00960000186833 ENSGT01060000249321 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 Poecilia ANCESTRAL SPECIES 1 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00960000186833 ENSGT01060000249321 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 NAME_6 ANCESTRAL SPECIES 59 ENSGT00940000155661.ib ENSGT00910000144243 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a Amazon molly MODERN SPECIES 290 ENSPFOG00000022542 usp1 (ENSPFOG00000007080) ENSPFOG00000007009 lrp8 (ENSPFOG00000006614) dmrt2b (ENSPFOG00000006515) cfap144 (ENSPFOG00000023029) ebna1bp2 (ENSPFOG00000006385) TMEM125 (ENSPFOG00000020299) ap1m3 (ENSPFOG00000006216) ENSPFOG00000006205 tie1 (ENSPFOG00000005742) DDAH1 (ENSPFOG00000005672) #20 ccn1 (ENSPFOG00000005627) #19 ZNHIT6 (ENSPFOG00000005615) #18 ENSPFOG00000003821 zgc:65873 (ENSPFOG00000003747) #22 SYDE2 (ENSPFOG00000003694) #23 DNAI3 (ENSPFOG00000003402) #24 MCOLN3 (ENSPFOG00000003215) #25 ENSPFOG00000003079 si:ch211-262h13.5 (ENSPFOG00000003016) ENSPFOG00000002049 gpc1a (ENSPFOG00000001685) gpc5b (ENSPFOG00000001598) nasp (ENSPFOG00000001492) Sailfin molly MODERN SPECIES 1135 zgc:65873 (ENSPLAG00000021457) #22 SYDE2 (ENSPLAG00000021465) #23 ENSPLAG00000021485 #24 MCOLN3 (ENSPLAG00000021669) #25 ENSPLAG00000021735 Guppy MODERN SPECIES 456 dmrt2b (ENSPREG00000021054) ENSPREG00000021064 ebna1bp2 (ENSPREG00000021076) ENSPREG00000021099 TMEM125 (ENSPREG00000021107) ap1m3 (ENSPREG00000021115) ENSPREG00000021128 tie1 (ENSPREG00000021138) mpl (ENSPREG00000021163) DDAH1 (ENSPREG00000021180) #20 ccn1 (ENSPREG00000021196) #19 ZNHIT6 (ENSPREG00000021209) #18 ENSPREG00000021222 ENSPREG00000021230 ENSPREG00000021241 zgc:65873 (ENSPREG00000021257) #22 SYDE2 (ENSPREG00000021272) #23 DNAI3 (ENSPREG00000021294) #24 MCOLN3 (ENSPREG00000021328) #25 ENSPREG00000021371 si:ch211-262h13.5 (ENSPREG00000021400) ENSPREG00000021430 gpc1a (ENSPREG00000021451) gpc5b (ENSPREG00000021468) nasp (ENSPREG00000021490) LRRC7 (ENSPREG00000021544) ENSPREG00000021568 ENSPREG00000021579 ENSPREG00000021595 MELTF (ENSPREG00000021614) ENSPREG00000021628 Platyfish MODERN SPECIES 23 ENSXMAG00000011384 lrp8 (ENSXMAG00000011361) dmrt2b (ENSXMAG00000022040) ebna1bp2 (ENSXMAG00000011341) cfap144 (ENSXMAG00000024667) TMEM125 (ENSXMAG00000011339) ap1m3 (ENSXMAG00000011310) ENSXMAG00000024456 tie1 (ENSXMAG00000011265) mpl (ENSXMAG00000011264) DDAH1 (ENSXMAG00000011260) #20 ccn1 (ENSXMAG00000011257) #19 ZNHIT6 (ENSXMAG00000011254) #18 ENSXMAG00000027398 ENSXMAG00000022269 zgc:65873 (ENSXMAG00000024170) #22 SYDE2 (ENSXMAG00000028263) #23 DNAI3 (ENSXMAG00000011208) #24 MCOLN3 (ENSXMAG00000011191) #25 ENSXMAG00000011185 si:ch211-262h13.5 (ENSXMAG00000023104) ENSXMAG00000011084 gpc1a (ENSXMAG00000011067) ENSXMAG00000011066 nasp (ENSXMAG00000011059) LRRC7 (ENSXMAG00000011038) ENSXMAG00000002899 MELTF (ENSXMAG00000010103) NCBP2AS2 (ENSXMAG00000020195) fkbp2 (ENSXMAG00000010101) ncbp2 (ENSXMAG00000010096) NAME_4 ANCESTRAL SPECIES 62 ENSGT00910000144243 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 Sheepshead minnow MODERN SPECIES 639 ENSCVAG00000004136 ebna1bp2 (ENSCVAG00000004152) TMEM125 (ENSCVAG00000004160) ap1m3 (ENSCVAG00000004195) tie1 (ENSCVAG00000004204) mpl (ENSCVAG00000004278) DDAH1 (ENSCVAG00000004288) #20 ccn1 (ENSCVAG00000004303) #19 ZNHIT6 (ENSCVAG00000004311) #18 ENSCVAG00000004315 #16 ENSCVAG00000004329 ENSCVAG00000004336 zgc:65873 (ENSCVAG00000004339) #22 ENSCVAG00000004352 ENSCVAG00000004361 ENSCVAG00000004384 smim7 (ENSCVAG00000004410) tmem38a (ENSCVAG00000004428) Mummichog MODERN SPECIES 2395 ENSFHEG00000001454 lrp8 (ENSFHEG00000001460) dmrt2b (ENSFHEG00000001465) cfap144 (ENSFHEG00000001471) ebna1bp2 (ENSFHEG00000001475) TMEM125 (ENSFHEG00000001476) ap1m3 (ENSFHEG00000001500) ENSFHEG00000001507 tie1 (ENSFHEG00000001516) mpl (ENSFHEG00000001540) DDAH1 (ENSFHEG00000001556) #20 ccn1 (ENSFHEG00000001561) #19 ZNHIT6 (ENSFHEG00000001567) #18 ENSFHEG00000001571 ENSFHEG00000001608 zgc:65873 (ENSFHEG00000001616) #22 ENSFHEG00000001622 SYDE2 (ENSFHEG00000001627) #23 DNAI3 (ENSFHEG00000001652) #24 MCOLN3 (ENSFHEG00000001693) #25 ENSFHEG00000001703 ENSFHEG00000001709 ENSFHEG00000001775 gpc1a (ENSFHEG00000001799) gpc5b (ENSFHEG00000001805) nasp (ENSFHEG00000001827) LRRC7 (ENSFHEG00000001879) ENSFHEG00000001909 ENSFHEG00000002202 MELTF (ENSFHEG00000002267) NCBP2AS2 (ENSFHEG00000002289) Oryzias ANCESTRAL SPECIES 5 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Oryzias_a ANCESTRAL SPECIES 14 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Japanese Medaka HdrR MODERN SPECIES 18 dmrt2b (ENSORLG00000025087) cfap144 (ENSORLG00000026302) ebna1bp2 (ENSORLG00000010609) ENSORLG00000025985 TMEM125 (ENSORLG00000023728) ap1m3 (ENSORLG00000010651) ENSORLG00000030649 tie1 (ENSORLG00000010699) mpl (ENSORLG00000023166) DDAH1 (ENSORLG00000010712) #20 ccn1 (ENSORLG00000010756) #19 ZNHIT6 (ENSORLG00000010767) #18 ENSORLG00000029152 ENSORLG00000030442 ENSORLG00000010818 zgc:65873 (ENSORLG00000010832) #22 SYDE2 (ENSORLG00000010849) #23 DNAI3 (ENSORLG00000010878) #24 MCOLN3 (ENSORLG00000010913) #25 ENSORLG00000010943 si:ch211-262h13.5 (ENSORLG00000022577) ENSORLG00000011003 ENSORLG00000023350 ENSORLG00000022126 ENSORLG00000025210 ENSORLG00000011040 gpc1a (ENSORLG00000011060) gpc5b (ENSORLG00000011066) nasp (ENSORLG00000011095) LRRC7 (ENSORLG00000011122) ENSORLG00000011180 Chinese medaka MODERN SPECIES 41 ENSOSIG00000022517 ENSOSIG00000022519 cfap144 (ENSOSIG00000022521) ap1m3 (ENSOSIG00000022524) TMEM125 (ENSOSIG00000022527) ENSOSIG00000022528 ENSOSIG00000022530 ENSOSIG00000022533 ENSOSIG00000022534 DDAH1 (ENSOSIG00000022536) #20 ccn1 (ENSOSIG00000022537) #19 ZNHIT6 (ENSOSIG00000001876) #18 ENSOSIG00000001896 ENSOSIG00000001918 ENSOSIG00000001948 zgc:65873 (ENSOSIG00000001969) #22 SYDE2 (ENSOSIG00000001983) #23 ENSOSIG00000002002 #24 MCOLN3 (ENSOSIG00000002012) #25 ENSOSIG00000002082 si:ch211-262h13.5 (ENSOSIG00000002195) ENSOSIG00000002233 Oryzias_b ANCESTRAL SPECIES 15 ENSGT00910000144243 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Javanese ricefish MODERN SPECIES 18 ENSOJAG00000013489 lrp8 (ENSOJAG00000013543) dmrt2b (ENSOJAG00000014138) cfap144 (ENSOJAG00000014157) ebna1bp2 (ENSOJAG00000014192) TMEM125 (ENSOJAG00000014323) ap1m3 (ENSOJAG00000014346) ENSOJAG00000014622 mpl (ENSOJAG00000014657) DDAH1 (ENSOJAG00000014840) #20 ccn1 (ENSOJAG00000014846) #19 ZNHIT6 (ENSOJAG00000014865) #18 ENSOJAG00000014978 ENSOJAG00000015000 ENSOJAG00000015006 zgc:65873 (ENSOJAG00000015016) #22 SYDE2 (ENSOJAG00000015029) #23 DNAI3 (ENSOJAG00000015112) #24 MCOLN3 (ENSOJAG00000015124) #25 ENSOJAG00000015151 si:ch211-262h13.5 (ENSOJAG00000015325) ENSOJAG00000015412 gpc1a (ENSOJAG00000016294) ENSOJAG00000016308 nasp (ENSOJAG00000016325) LRRC7 (ENSOJAG00000016416) ENSOJAG00000016528 MELTF (ENSOJAG00000017343) ENSOJAG00000017655 fkbp2 (ENSOJAG00000017663) ncbp2 (ENSOJAG00000017672) Indian medaka MODERN SPECIES 13 lrp8 (ENSOMEG00000008457) dmrt2b (ENSOMEG00000008490) cfap144 (ENSOMEG00000008517) ebna1bp2 (ENSOMEG00000008553) TMEM125 (ENSOMEG00000000214) ap1m3 (ENSOMEG00000000887) ENSOMEG00000008635 tie1 (ENSOMEG00000008768) mpl (ENSOMEG00000008842) DDAH1 (ENSOMEG00000008896) #20 ccn1 (ENSOMEG00000008931) #19 ZNHIT6 (ENSOMEG00000008955) #18 ENSOMEG00000008967 ENSOMEG00000008976 ENSOMEG00000009048 zgc:65873 (ENSOMEG00000009063) #22 SYDE2 (ENSOMEG00000009083) #23 DNAI3 (ENSOMEG00000009117) #24 MCOLN3 (ENSOMEG00000009141) #25 gpsm2l (ENSOMEG00000009214) si:ch211-262h13.5 (ENSOMEG00000009250) ENSOMEG00000009281 ENSOMEG00000009440 gpc1a (ENSOMEG00000009516) ENSOMEG00000009547 ENSOMEG00000009563 nasp (ENSOMEG00000009703) LRRC7 (ENSOMEG00000009931) ENSOMEG00000010323 MELTF (ENSOMEG00000010434) NCBP2AS2 (ENSOMEG00000010453) Ovalentaria_B ANCESTRAL SPECIES 8 ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000177205 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00960000186843 ENSGT00960000186833 ENSGT01060000249321 ENSGT00940000164867.b ENSGT00940000159265 Cichlidae ANCESTRAL SPECIES 43 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000177205 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Pseudocrenilabrinae ANCESTRAL SPECIES 23 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000177205 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Pseudocrenilabrinae_A ANCESTRAL SPECIES 10 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000177205 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Haplochromini ANCESTRAL SPECIES 9 ENSGT00940000154819.a.a.a.e.a ENSGT00940000154819.a.a.a.f ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000177205 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Haplochromini_A ANCESTRAL SPECIES 9 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a.f ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000177205 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Haplochromini_B ANCESTRAL SPECIES 32 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a.e.a ENSGT00940000156282.a.b ENSGT00390000014984 ENSGT00390000006224 ENSGT00390000003015.c ENSGT00940000166725 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000177205 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00960000186833 ENSGT00940000156262 ENSGT00940000169433.b.b ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 Eastern happy MODERN SPECIES 8 lrp8 (ENSACLG00000000909) ENSACLG00000000769 dmrt2b (ENSACLG00000000766) ebna1bp2 (ENSACLG00000000761) cfap144 (ENSACLG00000000750) TMEM125 (ENSACLG00000000746) ap1m3 (ENSACLG00000000706) tie1 (ENSACLG00000000607) mpl (ENSACLG00000000517) DDAH1 (ENSACLG00000000498) #20 ccn1 (ENSACLG00000000475) #19 ZNHIT6 (ENSACLG00000000470) #18 ENSACLG00000000463 ENSACLG00000000452 ENSACLG00000000436 zgc:65873 (ENSACLG00000000433) #22 SYDE2 (ENSACLG00000000355) #23 ENSACLG00000000350 DNAI3 (ENSACLG00000000328) #24 MCOLN3 (ENSACLG00000000309) #25 gpsm2l (ENSACLG00000000195) si:ch211-262h13.5 (ENSACLG00000027182) EPHB1 (ENSACLG00000027177) gpc1a (ENSACLG00000027169) ENSACLG00000027164 nasp (ENSACLG00000027138) ENSACLG00000027129 ENSACLG00000027124 LRRC7 (ENSACLG00000027029) ENSACLG00000027018 ENSACLG00000026832 Zebra mbuna MODERN SPECIES 1099 cbll1 (ENSMZEG00005007358) slc26a3.1 (ENSMZEG00005007189) ENSMZEG00005007113 ENSMZEG00005007081 ENSMZEG00005007054 ENSMZEG00005007031 NXPE3 (ENSMZEG00005007013) cmah (ENSMZEG00005006986) ENSMZEG00005006977 ENSMZEG00005006970 ccn1 (ENSMZEG00005006957) #19 ENSMZEG00005006949 #18 ENSMZEG00005006939 ENSMZEG00005006923 ENSMZEG00005006916 zgc:65873 (ENSMZEG00005006908) #22 SYDE2 (ENSMZEG00005006891) #23 ENSMZEG00005006864 #24 MCOLN3 (ENSMZEG00005006840) #25 gpsm2l (ENSMZEG00005006752) si:ch211-262h13.5 (ENSMZEG00005006736) EPHB1 (ENSMZEG00005006714) gpc1a (ENSMZEG00005006696) ENSMZEG00005006666 nasp (ENSMZEG00005006624) ENSMZEG00005006604 P. nyererei MODERN SPECIES 367 usp1 (ENSPNYG00000017300) ENSPNYG00000017275 lrp8 (ENSPNYG00000017130) dmrt2b (ENSPNYG00000017094) cfap144 (ENSPNYG00000017073) ebna1bp2 (ENSPNYG00000017056) TMEM125 (ENSPNYG00000017049) ap1m3 (ENSPNYG00000016944) tie1 (ENSPNYG00000016849) mpl (ENSPNYG00000016776) DDAH1 (ENSPNYG00000016743) #20 ccn1 (ENSPNYG00000016727) #19 ZNHIT6 (ENSPNYG00000016717) #18 ENSPNYG00000016699 ENSPNYG00000016686 zgc:65873 (ENSPNYG00000016669) #22 SYDE2 (ENSPNYG00000016650) #23 ENSPNYG00000016618 #24 MCOLN3 (ENSPNYG00000016557) #25 ENSPNYG00000016521 si:ch211-262h13.5 (ENSPNYG00000016511) EPHB1 (ENSPNYG00000016072) gpc1a (ENSPNYG00000015952) ENSPNYG00000015928 nasp (ENSPNYG00000015854) LRRC7 (ENSPNYG00000015783) ENSPNYG00000015765 ENSPNYG00000015715 MELTF (ENSPNYG00000015674) NCBP2AS2 (ENSPNYG00000015665) fkbp2 (ENSPNYG00000015640) Burton s mouthbrooder MODERN SPECIES 329 dmrt2b (ENSHBUG00000023312) cfap144 (ENSHBUG00000023317) ebna1bp2 (ENSHBUG00000023329) TMEM125 (ENSHBUG00000023340) ap1m3 (ENSHBUG00000023365) tie1 (ENSHBUG00000023530) mpl (ENSHBUG00000023646) DDAH1 (ENSHBUG00000023700) #20 ccn1 (ENSHBUG00000023716) #19 ZNHIT6 (ENSHBUG00000023722) #18 ENSHBUG00000023732 ENSHBUG00000023751 ENSHBUG00000023760 zgc:65873 (ENSHBUG00000023781) #22 SYDE2 (ENSHBUG00000023789) #23 DNAI3 (ENSHBUG00000023797) #24 MCOLN3 (ENSHBUG00000003399) #25 gpsm2l (ENSHBUG00000003509) si:ch211-262h13.5 (ENSHBUG00000003536) ENSHBUG00000003542 gpc1a (ENSHBUG00000003555) ENSHBUG00000003565 nasp (ENSHBUG00000003579) LRRC7 (ENSHBUG00000003625) ENSHBUG00000003817 MELTF (ENSHBUG00000003861) NCBP2AS2 (ENSHBUG00000003870) fkbp2 (ENSHBUG00000003899) ncbp2 (ENSHBUG00000003914) Lyretail cichlid MODERN SPECIES 403 DOCK7 (ENSNBRG00000018674) angptl3 (ENSNBRG00000018766) usp1 (ENSNBRG00000018780) lrp8 (ENSNBRG00000018817) dmrt2b (ENSNBRG00000018922) cfap144 (ENSNBRG00000018925) ebna1bp2 (ENSNBRG00000018937) TMEM125 (ENSNBRG00000018951) ap1m3 (ENSNBRG00000018957) tie1 (ENSNBRG00000018998) mpl (ENSNBRG00000019046) DDAH1 (ENSNBRG00000019097) #20 ccn1 (ENSNBRG00000019125) #19 ENSNBRG00000019131 #18 ENSNBRG00000019159 zgc:65873 (ENSNBRG00000019172) #22 SYDE2 (ENSNBRG00000019198) #23 DNAI3 (ENSNBRG00000019277) #24 MCOLN3 (ENSNBRG00000019429) #25 ENSNBRG00000019498 si:ch211-262h13.5 (ENSNBRG00000019530) EPHB1 (ENSNBRG00000019542) ENSNBRG00000019680 nasp (ENSNBRG00000019771) LRRC7 (ENSNBRG00000019795) ENSNBRG00000019836 ENSNBRG00000019848 ENSNBRG00000019878 ENSNBRG00000019891 ENSNBRG00000019929 Nile tilapia MODERN SPECIES 8 usp1 (ENSONIG00000008834) ENSONIG00000041601 lrp8 (ENSONIG00000008841) ENSONIG00000032859 dmrt2b (ENSONIG00000008852) cfap144 (ENSONIG00000030426) ebna1bp2 (ENSONIG00000008855) TMEM125 (ENSONIG00000040110) ap1m3 (ENSONIG00000008857) tie1 (ENSONIG00000008859) mpl (ENSONIG00000008863) DDAH1 (ENSONIG00000008864) #20 ccn1 (ENSONIG00000008866) #19 ZNHIT6 (ENSONIG00000028840) #18 ENSONIG00000008867 lg17h1orf52 (ENSONIG00000028969) #22 SYDE2 (ENSONIG00000008886) #23 DNAI3 (ENSONIG00000008888) #24 MCOLN3 (ENSONIG00000008895) #25 gpsm2l (ENSONIG00000008903) si:ch211-262h13.5 (ENSONIG00000008908) EPHB1 (ENSONIG00000008909) gpc1a (ENSONIG00000008922) ENSONIG00000008929 nasp (ENSONIG00000008932) LRRC7 (ENSONIG00000008936) ENSONIG00000008942 MELTF (ENSONIG00000008946) ENSONIG00000031854 fkbp2 (ENSONIG00000032293) NXPE3 (ENSONIG00000009076) Midas cichlid MODERN SPECIES 314 usp1 (ENSACIG00000011684) ENSACIG00000011668 lrp8 (ENSACIG00000011565) dmrt2b (ENSACIG00000011552) cfap144 (ENSACIG00000011543) ebna1bp2 (ENSACIG00000011514) TMEM125 (ENSACIG00000011511) ap1m3 (ENSACIG00000011475) tie1 (ENSACIG00000011429) tie1 (ENSACIG00000011396) mpl (ENSACIG00000011289) DDAH1 (ENSACIG00000011259) #20 ccn1 (ENSACIG00000011252) #19 ENSACIG00000011237 #18 ENSACIG00000011230 zgc:65873 (ENSACIG00000011210) #22 SYDE2 (ENSACIG00000011196) #23 DNAI3 (ENSACIG00000011146) #24 MCOLN3 (ENSACIG00000011123) #25 ENSACIG00000011042 si:ch211-262h13.5 (ENSACIG00000011010) EPHB1 (ENSACIG00000010512) gpc1a (ENSACIG00000010382) gpc5b (ENSACIG00000010360) nasp (ENSACIG00000010342) LRRC7 (ENSACIG00000010205) ENSACIG00000010145 MELTF (ENSACIG00000010074) NCBP2AS2 (ENSACIG00000010060) fkbp2 (ENSACIG00000010025) ncbp2 (ENSACIG00000010008) Pomacentridae ANCESTRAL SPECIES 16 ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725.h ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000177205 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00960000186843 ENSGT00960000186833 ENSGT01060000249321 ENSGT00940000164867.b ENSGT00940000159265 Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725.h ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000177205 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Amphiprion ANCESTRAL SPECIES 2 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725.h ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000177205 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a.a ENSGT00940000156262 ENSGT00960000186843 ENSGT01060000249321 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 Clown anemonefish MODERN SPECIES 1724 tie1 (ENSAOCG00000003025) ENSAOCG00000003015 DDAH1 (ENSAOCG00000003007) #20 ccn1 (ENSAOCG00000003002) #19 ZNHIT6 (ENSAOCG00000002998) #18 ENSAOCG00000000053 ENSAOCG00000002990 ENSAOCG00000002988 zgc:65873 (ENSAOCG00000002986) #22 SYDE2 (ENSAOCG00000002983) #23 Orange clownfish MODERN SPECIES 11 angptl3 (ENSAPEG00000011504) usp1 (ENSAPEG00000011537) ENSAPEG00000011564 lrp8 (ENSAPEG00000011589) dmrt2b (ENSAPEG00000011794) cfap144 (ENSAPEG00000011816) ebna1bp2 (ENSAPEG00000011835) TMEM125 (ENSAPEG00000011855) ap1m3 (ENSAPEG00000011876) tie1 (ENSAPEG00000011922) mpl (ENSAPEG00000011964) DDAH1 (ENSAPEG00000011985) #20 ccn1 (ENSAPEG00000012042) #19 ZNHIT6 (ENSAPEG00000012062) #18 ENSAPEG00000012083 zgc:65873 (ENSAPEG00000012094) #22 SYDE2 (ENSAPEG00000012102) #23 DNAI3 (ENSAPEG00000012116) #24 MCOLN3 (ENSAPEG00000012209) #25 ENSAPEG00000012279 si:ch211-262h13.5 (ENSAPEG00000012349) ENSAPEG00000012364 EPHB1 (ENSAPEG00000012518) gpc1a (ENSAPEG00000012788) ENSAPEG00000012797 nasp (ENSAPEG00000012840) ENSAPEG00000012948 ENSAPEG00000013101 ENSAPEG00000013184 ENSAPEG00000013198 MELTF (ENSAPEG00000013241) Spiny chromis MODERN SPECIES 938 ENSAPOG00000003347 zgc:65873 (ENSAPOG00000003355) #22 SYDE2 (ENSAPOG00000003372) #23 DNAI3 (ENSAPOG00000003443) #24 MCOLN3 (ENSAPOG00000003513) #25 ENSAPOG00000003562 si:ch211-262h13.5 (ENSAPOG00000003607) ENSAPOG00000003619 Bicolor damselfish MODERN SPECIES 267 tie1 (ENSSPAG00000015840) mpl (ENSSPAG00000015876) DDAH1 (ENSSPAG00000015896) #20 ccn1 (ENSSPAG00000015924) #19 ZNHIT6 (ENSSPAG00000015943) #18 ENSSPAG00000015961 ENSSPAG00000015969 ENSSPAG00000015980 zgc:65873 (ENSSPAG00000015988) #22 SYDE2 (ENSSPAG00000015997) #23 DNAI3 (ENSSPAG00000016018) #24 MCOLN3 (ENSSPAG00000016151) #25 ENSSPAG00000016229 si:ch211-262h13.5 (ENSSPAG00000016294) ENSSPAG00000016310 ENSSPAG00000016325 EPHB1 (ENSSPAG00000016476) gpc1a (ENSSPAG00000016661) gpc5b (ENSSPAG00000016694) nasp (ENSSPAG00000016710) LRRC7 (ENSSPAG00000016745) ENSSPAG00000016800 ENSSPAG00000016803 ENSSPAG00000016820 Percomorphaceae_C ANCESTRAL SPECIES 8 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 Eupercaria ANCESTRAL SPECIES 8 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 Eupecaria_A ANCESTRAL SPECIES 11 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 Ballan wrasse MODERN SPECIES 60 lrp8 (ENSLBEG00000014339) dmrt2b (ENSLBEG00000014310) cfap144 (ENSLBEG00000014289) ebna1bp2 (ENSLBEG00000014254) TMEM125 (ENSLBEG00000014238) ap1m3 (ENSLBEG00000014192) ENSLBEG00000014162 tie1 (ENSLBEG00000014097) mpl (ENSLBEG00000013944) DDAH1 (ENSLBEG00000013865) #20 ccn1 (ENSLBEG00000013824) #19 ZNHIT6 (ENSLBEG00000013799) #18 ENSLBEG00000013780 ENSLBEG00000013753 ENSLBEG00000013735 zgc:65873 (ENSLBEG00000013724) #22 SYDE2 (ENSLBEG00000013673) #23 DNAI3 (ENSLBEG00000013594) #24 MCOLN3 (ENSLBEG00000013519) #25 ENSLBEG00000013434 si:ch211-262h13.5 (ENSLBEG00000013394) EPHB1 (ENSLBEG00000013357) gpc1a (ENSLBEG00000013321) Eupecaria_B ANCESTRAL SPECIES 10 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 Perciformes ANCESTRAL SPECIES 8 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT01030000235036 ENSGT00940000166725 ENSGT01030000234931 ENSGT00510000048988 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Perciformes_a ANCESTRAL SPECIES 6 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT01030000235036 ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Pike perch MODERN SPECIES 61 lrp8 (ENSSLUG00000022227) dmrt2b (ENSSLUG00000022973) ENSSLUG00000022976 ebna1bp2 (ENSSLUG00000022980) TMEM125 (ENSSLUG00000022988) ENSSLUG00000022990 ap1m3 (ENSSLUG00000022997) ENSSLUG00000023036 tie1 (ENSSLUG00000023059) mpl (ENSSLUG00000023362) DDAH1 (ENSSLUG00000023369) #20 ccn1 (ENSSLUG00000023373) #19 ZNHIT6 (ENSSLUG00000023375) #18 ENSSLUG00000023379 mrps28 (ENSSLUG00000023381) zgc:65873 (ENSSLUG00000023382) #22 SYDE2 (ENSSLUG00000023385) #23 DNAI3 (ENSSLUG00000023394) #24 MCOLN3 (ENSSLUG00000023433) #25 ENSSLUG00000023592 si:ch211-262h13.5 (ENSSLUG00000023639) EPHB1 (ENSSLUG00000010010) gpc1a (ENSSLUG00000010186) ENSSLUG00000010266 nasp (ENSSLUG00000010278) LRRC7 (ENSSLUG00000010319) ENSSLUG00000010424 ENSSLUG00000010574 MELTF (ENSSLUG00000012438) ENSSLUG00000012445 fkbp2 (ENSSLUG00000012448) Channel bull blenny MODERN SPECIES 18 usp1 (ENSCGOG00000019734) ENSCGOG00000019731 lrp8 (ENSCGOG00000019708) dmrt2b (ENSCGOG00000019704) cfap144 (ENSCGOG00000019698) ebna1bp2 (ENSCGOG00000019670) TMEM125 (ENSCGOG00000019668) ap1m3 (ENSCGOG00000019245) ENSCGOG00000019218 tie1 (ENSCGOG00000019073) mpl (ENSCGOG00000019058) DDAH1 (ENSCGOG00000019055) #20 ccn1 (ENSCGOG00000019052) #19 ZNHIT6 (ENSCGOG00000019050) #18 ENSCGOG00000019047 zgc:65873 (ENSCGOG00000019042) #22 ENSCGOG00000019040 #23 DNAI3 (ENSCGOG00000019028) #24 MCOLN3 (ENSCGOG00000019020) #25 ENSCGOG00000019014 si:ch211-262h13.5 (ENSCGOG00000019011) EPHB1 (ENSCGOG00000018148) gpc1a (ENSCGOG00000018118) ENSCGOG00000018116 nasp (ENSCGOG00000018115) ENSCGOG00000018112 LRRC7 (ENSCGOG00000017477) ENSCGOG00000011940 MELTF (ENSCGOG00000011715) NCBP2AS2 (ENSCGOG00000011709) fkbp2 (ENSCGOG00000011696) Cottioidei ANCESTRAL SPECIES 5 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00510000048988 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Lumpfish MODERN SPECIES 19 ENSCLMG00005013303 lrp8 (ENSCLMG00005012031) dmrt2b (ENSCLMG00005011999) cfap144 (ENSCLMG00005011996) ebna1bp2 (ENSCLMG00005011995) TMEM125 (ENSCLMG00005011994) ap1m3 (ENSCLMG00005010707) C1orf210 (ENSCLMG00005010694) tie1 (ENSCLMG00005010687) mpl (ENSCLMG00005010680) DDAH1 (ENSCLMG00005010679) #20 ENSCLMG00005010678 ccn1 (ENSCLMG00005010676) #19 ZNHIT6 (ENSCLMG00005010675) #18 ENSCLMG00005010674 zgc:65873 (ENSCLMG00005010672) #22 SYDE2 (ENSCLMG00005010671) #23 ENSCLMG00005010670 #24 MCOLN3 (ENSCLMG00005010664) #25 gpsm2l (ENSCLMG00005010663) si:ch211-262h13.5 (ENSCLMG00005010661) ENSCLMG00005010658 ENSCLMG00005010654 gpc1a (ENSCLMG00005010652) ENSCLMG00005010651 ENSCLMG00005010649 LRRC7 (ENSCLMG00005010559) ENSCLMG00005000510 MELTF (ENSCLMG00005000152) NCBP2AS2 (ENSCLMG00005000066) fkbp2 (ENSCLMG00005014855) Stickleback MODERN SPECIES 8 KANK4 (ENSGACG00000006846) lrp8 (ENSGACG00000006827) ENSGACG00000006825 ENSGACG00000006820 dmrt2b (ENSGACG00000006816) ebna1bp2 (ENSGACG00000006802) TMEM125 (ENSGACG00000006799) ap1m3 (ENSGACG00000006754) ENSGACG00000006751 tie1 (ENSGACG00000006730) mpl (ENSGACG00000006723) DDAH1 (ENSGACG00000006704) #20 ccn1 (ENSGACG00000006699) #19 ZNHIT6 (ENSGACG00000006695) #18 ENSGACG00000006637 zgc:65873 (ENSGACG00000006617) #22 ENSGACG00000006613 #23 DNAI3 (ENSGACG00000006604) #24 MCOLN3 (ENSGACG00000006562) #25 ENSGACG00000006551 si:ch211-262h13.5 (ENSGACG00000006545) ENSGACG00000006527 gpc1a (ENSGACG00000006519) ENSGACG00000006515 nasp (ENSGACG00000006499) ENSGACG00000006490 stxbp3 (ENSGACG00000006461) ENSGACG00000006451 ENSGACG00000006445 henmt1 (ENSGACG00000006440) fam102bb (ENSGACG00000006422) Eupecaria_C ANCESTRAL SPECIES 4 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 Eupercaria_incertae_sedis ANCESTRAL SPECIES 3 ENSGT00910000144243 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 European seabass MODERN SPECIES 17 usp1 (ENSDLAG00005021691) ENSDLAG00005021683 lrp8 (ENSDLAG00005021385) dmrt2b (ENSDLAG00005021365) cfap144 (ENSDLAG00005021357) EBNA1BP2 (ENSDLAG00005021282) TMEM125 (ENSDLAG00005029558) ap1m3 (ENSDLAG00005021106) ENSDLAG00005021095 tie1 (ENSDLAG00005020157) mpl (ENSDLAG00005020097) DDAH1 (ENSDLAG00005020085) #20 ccn1 (ENSDLAG00005020075) #19 ZNHIT6 (ENSDLAG00005028976) #18 ENSDLAG00005020024 zgc:65873 (ENSDLAG00005028309) #22 SYDE2 (ENSDLAG00005019987) #23 DNAI3 (ENSDLAG00005019962) #24 MCOLN3 (ENSDLAG00005019923) #25 ENSDLAG00005019885 ENSDLAG00005019873 ENSDLAG00005019798 ENSDLAG00005019783 ENSDLAG00005019767 ENSDLAG00005019740 ENSDLAG00005019708 ENSDLAG00005019615 ENSDLAG00005012036 MELTF (ENSDLAG00005011829) ENSDLAG00005011825 NCBP2 (ENSDLAG00005032995) Large yellow croaker MODERN SPECIES 489 glrx2 (ENSLCRG00005007672) ENSLCRG00005007671 RGS13 (ENSLCRG00005007668) uchl5 (ENSLCRG00005007659) ENSLCRG00005007657 RGS1 (ENSLCRG00005007653) brinp3a.2 (ENSLCRG00005007649) brinp3a.1 (ENSLCRG00005007647) ENSLCRG00005007620 rgs8 (ENSLCRG00005007618) rgs16 (ENSLCRG00005007617) rgs5a (ENSLCRG00005007615) rgs4 (ENSLCRG00005007613) ENSLCRG00005007611 si:ch211-284e20.8 (ENSLCRG00005007610) zgc:65873 (ENSLCRG00005007609) #22 SYDE2 (ENSLCRG00005007608) #23 DNAI3 (ENSLCRG00005007603) #24 MCOLN3 (ENSLCRG00005007600) #25 ENSLCRG00005007592 si:ch211-262h13.5 (ENSLCRG00005007588) ENSLCRG00005006443 gpc1a (ENSLCRG00005006437) ENSLCRG00005006435 ENSLCRG00005006433 pomgnt1 (ENSLCRG00005006376) TSPAN1 (ENSLCRG00005006351) PIK3R3 (ENSLCRG00005006158) MAST2 (ENSLCRG00005006105) ENSLCRG00005006101 ENSLCRG00005006100 Gilthead seabream MODERN SPECIES 2 usp1 (ENSSAUG00010022029) ENSSAUG00010022031 lrp8 (ENSSAUG00010022033) dmrt2b (ENSSAUG00010022116) cfap144 (ENSSAUG00010022117) ebna1bp2 (ENSSAUG00010022118) ENSSAUG00010022119 TMEM125 (ENSSAUG00010022120) ap1m3 (ENSSAUG00010022122) tie1 (ENSSAUG00010022142) mpl (ENSSAUG00010022753) DDAH1 (ENSSAUG00010022757) #20 ccn1 (ENSSAUG00010022760) #19 ZNHIT6 (ENSSAUG00010022764) #18 ENSSAUG00010022767 zgc:65873 (ENSSAUG00010022771) #22 ENSSAUG00010022774 #23 DNAI3 (ENSSAUG00010022777) #24 MCOLN3 (ENSSAUG00010022781) #25 gpsm2l (ENSSAUG00010022784) si:ch211-262h13.5 (ENSSAUG00010022798) EPHB1 (ENSSAUG00010022820) gpc1a (ENSSAUG00010023734) ENSSAUG00010023739 si:ch211-198c19.1 (ENSSAUG00010023743) nasp (ENSSAUG00010023745) ENSSAUG00010023752 LRRC7 (ENSSAUG00010023773) ENSSAUG00010023982 aurkb (ENSSAUG00010026190) MELTF (ENSSAUG00010026192) Tetraodontidae ANCESTRAL SPECIES 5 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT01030000235036 ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000161257 ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Fugu MODERN SPECIES 12 lrp8 (ENSTRUG00000018485) dmrt2b (ENSTRUG00000018484) ENSTRUG00000021155 ebna1bp2 (ENSTRUG00000018483) TMEM125 (ENSTRUG00000018482) ENSTRUG00000020153 ap1m3 (ENSTRUG00000018481) ENSTRUG00000021015 tie1 (ENSTRUG00000018474) mpl (ENSTRUG00000018473) DDAH1 (ENSTRUG00000033362) #20 ZNHIT6 (ENSTRUG00000020904) #18 ccn1 (ENSTRUG00000018465) #19 ENSTRUG00000024697 ENSTRUG00000027251 zgc:65873 (ENSTRUG00000018451) #22 SYDE2 (ENSTRUG00000018447) #23 DNAI3 (ENSTRUG00000018442) #24 MCOLN3 (ENSTRUG00000018439) #25 gpsm2 (ENSTRUG00000018432) si:ch211-262h13.5 (ENSTRUG00000018430) ENSTRUG00000018413 gpc1a (ENSTRUG00000018408) gpc5b (ENSTRUG00000031964) nasp (ENSTRUG00000018401) LRRC7 (ENSTRUG00000018389) ENSTRUG00000018374 MELTF (ENSTRUG00000018361) ENSTRUG00000019538 fkbp2 (ENSTRUG00000018356) ncbp2 (ENSTRUG00000018355) Tetraodon MODERN SPECIES KANK4 (ENSTNIG00000018096) lrp8 (ENSTNIG00000018095) ENSTNIG00000000768 ENSTNIG00000018094 dmrt2b (ENSTNIG00000018093) ebna1bp2 (ENSTNIG00000018092) TMEM125 (ENSTNIG00000018091) ap1m3 (ENSTNIG00000018090) tie1 (ENSTNIG00000018089) mpl (ENSTNIG00000001802) DDAH1 (ENSTNIG00000018088) #20 ccn1 (ENSTNIG00000018087) #19 ENSTNIG00000000440 #18 ENSTNIG00000018086 ENSTNIG00000018085 zgc:65873 (ENSTNIG00000018084) #22 SYDE2 (ENSTNIG00000018083) #23 ENSTNIG00000018082 #24 MCOLN3 (ENSTNIG00000018081) #25 gpsm2 (ENSTNIG00000018080) si:ch211-262h13.5 (ENSTNIG00000018079) ENSTNIG00000018078 gpc1a (ENSTNIG00000018077) gpc5b (ENSTNIG00000018076) nasp (ENSTNIG00000018075) LRRC7 (ENSTNIG00000018074) ENSTNIG00000018073 MELTF (ENSTNIG00000006064) fkbp2 (ENSTNIG00000001553) ncbp2 (ENSTNIG00000006065) ENSTNIG00000006066 Percomorphaceae_D ANCESTRAL SPECIES 8 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 Anabantaria ANCESTRAL SPECIES 7 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 Anabantoidei ANCESTRAL SPECIES 6 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 Climbing perch MODERN SPECIES 17 lrp8 (ENSATEG00000020413) dmrt2b (ENSATEG00000025554) cfap144 (ENSATEG00000026752) EBNA1BP2 (ENSATEG00000020458) ENSATEG00000027683 TMEM125 (ENSATEG00000020464) ap1m3 (ENSATEG00000020473) ENSATEG00000020505 tie1 (ENSATEG00000020549) mpl (ENSATEG00000020625) DDAH1 (ENSATEG00000020648) #20 ccn1 (ENSATEG00000020663) #19 ZNHIT6 (ENSATEG00000020670) #18 ENSATEG00000029763 ENSATEG00000028193 C1orf52 (ENSATEG00000030069) #22 SYDE2 (ENSATEG00000020741) #23 DNAI3 (ENSATEG00000020762) #24 MCOLN3 (ENSATEG00000020842) #25 ENSATEG00000020927 ENSATEG00000020991 ENSATEG00000021063 ENSATEG00000029475 ENSATEG00000021424 ENSATEG00000021435 ENSATEG00000021449 ENSATEG00000021474 ENSATEG00000021491 ENSATEG00000021505 ENSATEG00000021590 MELTF (ENSATEG00000021633) Siamese fighting fish MODERN SPECIES 15 usp1 (ENSBSLG00000010617) ENSBSLG00000010124 lrp8 (ENSBSLG00000009794) dmrt2b (ENSBSLG00000009401) cfap144 (ENSBSLG00000009380) ebna1bp2 (ENSBSLG00000009290) TMEM125 (ENSBSLG00000009268) ap1m3 (ENSBSLG00000008999) tie1 (ENSBSLG00000007924) mpl (ENSBSLG00000007830) DDAH1 (ENSBSLG00000007819) #20 ccn1 (ENSBSLG00000007803) #19 ZNHIT6 (ENSBSLG00000018249) #18 ENSBSLG00000018236 ENSBSLG00000018230 zgc:65873 (ENSBSLG00000018208) #22 ENSBSLG00000018168 #23 DNAI3 (ENSBSLG00000017997) #24 MCOLN3 (ENSBSLG00000017897) #25 ENSBSLG00000017837 si:ch211-262h13.5 (ENSBSLG00000017807) ENSBSLG00000017247 gpc1a (ENSBSLG00000017202) gpc5b (ENSBSLG00000017150) nasp (ENSBSLG00000016755) LRRC7 (ENSBSLG00000015854) ENSBSLG00000013509 MELTF (ENSBSLG00000012543) NCBP2AS2 (ENSBSLG00000012535) fkbp2 (ENSBSLG00000012531) ncbp2 (ENSBSLG00000012524) Zig-zag eel MODERN SPECIES 18 ENSMAMG00000009441 lrp8 (ENSMAMG00000009490) dmrt2b (ENSMAMG00000009514) ENSMAMG00000026541 ENSMAMG00000025371 EBNA1BP2 (ENSMAMG00000009561) TMEM125 (ENSMAMG00000009594) ap1m3 (ENSMAMG00000009607) tie1 (ENSMAMG00000009664) mpl (ENSMAMG00000009787) DDAH1 (ENSMAMG00000009804) #20 ccn1 (ENSMAMG00000009844) #19 ZNHIT6 (ENSMAMG00000026784) #18 ENSMAMG00000025170 ENSMAMG00000009925 zgc:65873 (ENSMAMG00000009931) #22 ENSMAMG00000026262 #23 DNAI3 (ENSMAMG00000009961) #24 MCOLN3 (ENSMAMG00000009978) #25 ENSMAMG00000010021 ENSMAMG00000010065 ENSMAMG00000010090 ENSMAMG00000011080 ENSMAMG00000011088 ENSMAMG00000011114 ENSMAMG00000011124 ENSMAMG00000011154 ENSMAMG00000011221 MELTF (ENSMAMG00000011255) NCBP2AS2 (ENSMAMG00000011307) ENSMAMG00000011304 Carangaria ANCESTRAL SPECIES 7 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 Carangaria_A ANCESTRAL SPECIES 3 ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.e.a ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 Seriola ANCESTRAL SPECIES ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT01030000235036 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.e.a ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000167241 ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 Greater amberjack MODERN SPECIES cfap144 (ENSSDUG00000013778) ebna1bp2 (ENSSDUG00000013791) ENSSDUG00000013802 TMEM125 (ENSSDUG00000013814) ap1m3 (ENSSDUG00000013819) ENSSDUG00000013836 tie1 (ENSSDUG00000013845) tie1 (ENSSDUG00000013895) mpl (ENSSDUG00000013937) DDAH1 (ENSSDUG00000014042) #20 ccn1 (ENSSDUG00000014052) #19 ZNHIT6 (ENSSDUG00000014067) #18 ENSSDUG00000014101 ENSSDUG00000014110 ENSSDUG00000014137 zgc:65873 (ENSSDUG00000014172) #22 SYDE2 (ENSSDUG00000014181) #23 DNAI3 (ENSSDUG00000014196) #24 MCOLN3 (ENSSDUG00000014225) #25 ENSSDUG00000014248 si:ch211-262h13.5 (ENSSDUG00000014306) ENSSDUG00000014364 gpc1a (ENSSDUG00000014944) ENSSDUG00000014977 nasp (ENSSDUG00000015021) ENSSDUG00000015044 LRRC7 (ENSSDUG00000015076) ENSSDUG00000015212 MELTF (ENSSDUG00000015378) ENSSDUG00000015417 fkbp2 (ENSSDUG00000015421) Yellowtail amberjack MODERN SPECIES 3236 ENSSLDG00000001872 ENSSLDG00000001852 lrp8 (ENSSLDG00000001676) dmrt2b (ENSSLDG00000001642) ebna1bp2 (ENSSLDG00000001599) cfap144 (ENSSLDG00000001561) TMEM125 (ENSSLDG00000001546) ap1m3 (ENSSLDG00000001499) ENSSLDG00000001471 tie1 (ENSSLDG00000001435) mpl (ENSSLDG00000001315) DDAH1 (ENSSLDG00000001267) #20 ccn1 (ENSSLDG00000001228) #19 ZNHIT6 (ENSSLDG00000001220) #18 ENSSLDG00000001181 zgc:65873 (ENSSLDG00000001159) #22 SYDE2 (ENSSLDG00000001124) #23 DNAI3 (ENSSLDG00000001042) #24 MCOLN3 (ENSSLDG00000001026) #25 ENSSLDG00000000995 si:ch211-262h13.5 (ENSSLDG00000000980) ENSSLDG00000000181 gpc1a (ENSSLDG00000000143) ENSSLDG00000000135 nasp (ENSSLDG00000000100) LRRC7 (ENSSLDG00000024215) ENSSLDG00000024187 ENSSLDG00000024183 ENSSLDG00000024162 ENSSLDG00000024134 ENSSLDG00000024129 Barramundi perch MODERN SPECIES 298 dmrt2b (ENSLCAG00010024673) ENSLCAG00010024670 ebna1bp2 (ENSLCAG00010024659) TMEM125 (ENSLCAG00010024654) ENSLCAG00010024624 mpl (ENSLCAG00010024380) DDAH1 (ENSLCAG00010024374) #20 ccn1 (ENSLCAG00010024367) #19 ZNHIT6 (ENSLCAG00010024360) #18 ENSLCAG00010024355 ENSLCAG00010024333 zgc:65873 (ENSLCAG00010024326) #22 SYDE2 (ENSLCAG00010024317) #23 DNAI3 (ENSLCAG00010024310) #24 MCOLN3 (ENSLCAG00010024306) #25 ENSLCAG00010024302 si:ch211-262h13.5 (ENSLCAG00010024298) ENSLCAG00010024286 Pleuronectoidei ANCESTRAL SPECIES 20 ENSGT00940000158468.a.b ENSGT00940000154819.a.a.a ENSGT00940000156282.a.b ENSGT00390000006224 ENSGT00390000014984 ENSGT00390000003015.c ENSGT00940000166725 ENSGT01030000234931 ENSGT00940000157693 ENSGT00940000166530 ENSGT00940000157892 #20 ENSGT00940000155151.b.d #19 ENSGT00390000017201 #18 ENSGT00940000163583 ENSGT00940000163514.C ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00950000182930.D ENSGT00940000155297.hb.b.f ENSGT01050000244897.a.a.b.b ENSGT01050000244955.b.c ENSGT00390000016650.c.a ENSGT00940000156262 ENSGT00940000164867.b ENSGT00940000159265 ENSGT00390000001143 ENSGT00940000157074 ENSGT00390000003197 Tongue sole MODERN SPECIES 11 lrp8 (ENSCSEG00000018762) dmrt2b (ENSCSEG00000018774) ENSCSEG00000018783 ebna1bp2 (ENSCSEG00000018795) TMEM125 (ENSCSEG00000018806) ap1m3 (ENSCSEG00000018808) ENSCSEG00000018820 tie1 (ENSCSEG00000018824) mpl (ENSCSEG00000018831) DDAH1 (ENSCSEG00000018840) #20 ccn1 (ENSCSEG00000018846) #19 ZNHIT6 (ENSCSEG00000018854) #18 ENSCSEG00000018862 ENSCSEG00000018866 ENSCSEG00000018874 zgc:65873 (ENSCSEG00000018883) #22 SYDE2 (ENSCSEG00000018891) #23 DNAI3 (ENSCSEG00000018909) #24 MCOLN3 (ENSCSEG00000018920) #25 ENSCSEG00000018929 ENSCSEG00000018944 ENSCSEG00000018949 gpc1a (ENSCSEG00000018958) ENSCSEG00000018969 nasp (ENSCSEG00000018979) LRRC7 (ENSCSEG00000019005) ENSCSEG00000019203 MELTF (ENSCSEG00000019283) ENSCSEG00000019317 ncbp2 (ENSCSEG00000019322) fkbp2 (ENSCSEG00000019330) Turbot MODERN SPECIES 3 ENSSMAG00000020611 lrp8 (ENSSMAG00000020607) dmrt2b (ENSSMAG00000020606) cfap144 (ENSSMAG00000024002) EBNA1BP2 (ENSSMAG00000020600) TMEM125 (ENSSMAG00000020599) ap1m3 (ENSSMAG00000020596) ENSSMAG00000020595 tie1 (ENSSMAG00000020579) mpl (ENSSMAG00000020577) DDAH1 (ENSSMAG00000020576) #20 ccn1 (ENSSMAG00000020574) #19 ZNHIT6 (ENSSMAG00000037444) #18 ENSSMAG00000020570 ENSSMAG00000020568 zgc:65873 (ENSSMAG00000020567) #22 SYDE2 (ENSSMAG00000020561) #23 DNAI3 (ENSSMAG00000020560) #24 MCOLN3 (ENSSMAG00000020552) #25 ENSSMAG00000020532 ENSSMAG00000020527 ENSSMAG00000020413 ENSSMAG00000020400 ENSSMAG00000020394 ENSSMAG00000020389 ENSSMAG00000020277 ENSSMAG00000020119 MELTF (ENSSMAG00000020073) NCBP2AS2 (ENSSMAG00000020071) ENSSMAG00000020060 NCBP2 (ENSSMAG00000030669) Pinecone sodierfish MODERN SPECIES 18 ENSMMDG00005022895 lrp8 (ENSMMDG00005022915) dmrt2b (ENSMMDG00005023072) cfap144 (ENSMMDG00005023077) ebna1bp2 (ENSMMDG00005023080) TMEM125 (ENSMMDG00005023085) ap1m3 (ENSMMDG00005023094) C1orf210 (ENSMMDG00005023139) tie1 (ENSMMDG00005023144) tie1 (ENSMMDG00005023146) mpl (ENSMMDG00005023157) DDAH1 (ENSMMDG00005023165) #20 ccn1 (ENSMMDG00005023169) #19 ZNHIT6 (ENSMMDG00005023171) #18 ENSMMDG00005023174 zgc:65873 (ENSMMDG00005023175) #22 ENSMMDG00005023176 #23 ENSMMDG00005023179 #24 MCOLN3 (ENSMMDG00005023187) #25 gpsm2l (ENSMMDG00005023220) si:ch211-262h13.5 (ENSMMDG00005023224) ENSMMDG00005023227 ENSMMDG00005023228 gpc1a (ENSMMDG00005023229) gpc5b (ENSMMDG00005023232) nasp (ENSMMDG00005023239) ENSMMDG00005023268 LRRC7 (ENSMMDG00005023288) ENSMMDG00005023368 ENSMMDG00005023372 MELTF (ENSMMDG00005002840) Cod MODERN SPECIES 3 DNAJC6 (ENSGMOG00000005812) ENSGMOG00000025178 ENSGMOG00000012322 tmed5 (ENSGMOG00000026573) pigc (ENSGMOG00000012341) mettl13 (ENSGMOG00000012344) ENSGMOG00000027922 itpa (ENSGMOG00000012348) ENSGMOG00000020597 vamp4 (ENSGMOG00000015069) myoc (ENSGMOG00000012105) PRRC2C (ENSGMOG00000034131) ENSGMOG00000024070 ENSGMOG00000018777 ENSGMOG00000018756 zgc:65873 (ENSGMOG00000029043) #22 SYDE2 (ENSGMOG00000022762) #23 DNAI3 (ENSGMOG00000004417) #24 ENSGMOG00000013687 ENSGMOG00000013662 ENSGMOG00000008124 ENSGMOG00000000568 ENSGMOG00000018816 ENSGMOG00000018818 paics (ENSGMOG00000018876) ppat (ENSGMOG00000018950) AASDH (ENSGMOG00000018953) ENSGMOG00000034191 cracd (ENSGMOG00000032860) ENSGMOG00000029724 kdr (ENSGMOG00000018994) Protacanthopterygii ANCESTRAL SPECIES 30 ENSGT00390000018600 ENSGT01060000248530.C.d ENSGT00940000155190.bb.a ENSGT00940000156301.a.a ENSGT00940000174981 ENSGT00940000154396.b.b.a ENSGT00940000156209 ENSGT00390000010922 ENSGT00510000049371 ENSGT00390000007658 ENSGT00530000063790.a.a ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b.d #19 ENSGT00940000157892 #20 ENSGT00390000017398 #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a ENSGT00940000157607 ENSGT00390000004674.i.b ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 ENSGT00940000156132.h ENSGT00940000164927.a ENSGT00390000015318.b ENSGT01010000224837 ENSGT00390000016650.c.a.c ENSGT00940000163309 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 104 ENSGT00390000018600 ENSGT00940000155190.bb.a.g ENSGT00940000156301.a.a.c.b ENSGT00940000174981 ENSGT00390000010922 ENSGT00510000049371.n ENSGT00390000007658 ENSGT00530000063790.a.a.d ENSGT00940000154682.C.x #13 ENSGT00940000161548 #14 ENSGT00940000154682.C.w #13 ENSGT00940000163583.y.b ENSGT00390000017201 #18 ENSGT00940000155151.b.d.e #19 ENSGT00940000157892.m #20 ENSGT00390000017398.y #22 ENSGT01030000234635.a.a.a.a.f #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a.f ENSGT00940000157607.k.b ENSGT00390000004674.j ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 ENSGT00940000156132.h ENSGT00940000164927.a ENSGT00390000015318.b ENSGT00420000029753.b.ab ENSGT00390000016650.c.a.d ENSGT00940000156539.w ENSGT00940000163309 Salmoninae_a ANCESTRAL SPECIES 9 ENSGT00510000049371.n ENSGT00390000007658 ENSGT00530000063790.a.a.d ENSGT00940000154682.C.x #13 ENSGT00940000154682.C.w #13 ENSGT00940000163514.C ENSGT00940000163583.y.b ENSGT00390000017201 #18 ENSGT00940000155151.b.d.e #19 ENSGT01060000249603 ENSGT00940000157892.m #20 ENSGT00390000017398.y #22 ENSGT01030000234635.a.a.a.a.f #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a.f ENSGT00940000157607.k.b ENSGT00390000004674.j ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 ENSGT00940000156132.h ENSGT00940000164927.a ENSGT00390000015318.b ENSGT00420000029753.b.ab ENSGT00390000016650.c.a.d ENSGT00940000156539.w ENSGT00940000163309 Salmo ANCESTRAL SPECIES 14 ENSGT00510000049371.n ENSGT00390000007658 ENSGT00530000063790.a.a.d ENSGT00940000154682.C.x #13 ENSGT00940000154682.C.w #13 ENSGT00940000163514.C ENSGT00940000163583.y.b ENSGT00390000017201 #18 ENSGT00940000155151.b.d.e #19 ENSGT01060000249603 ENSGT00940000157892.m #20 ENSGT00390000017398.y #22 ENSGT01030000234635.a.a.a.a.f #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a.f ENSGT00940000157607.k.b ENSGT00390000004674.j ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 ENSGT00940000156132.h ENSGT00940000164927.a ENSGT00390000015318.b ENSGT00420000029753.b.ab ENSGT00390000016650.c.a.d ENSGT00940000156539.w ENSGT00940000163309 River trout MODERN SPECIES 14 SGIP1 (ENSSTUG00000037517) dnai4 (ENSSTUG00000037444) pars2 (ENSSTUG00000037429) ttc4 (ENSSTUG00000037232) TTC22 (ENSSTUG00000037112) ENSSTUG00000037098 lurap1 (ENSSTUG00000037087) CLCA2 (ENSSTUG00000035765) #14 clca1 (ENSSTUG00000035394) #13 ENSSTUG00000035355 ENSSTUG00000035344 ZNHIT6 (ENSSTUG00000035338) #18 ccn1 (ENSSTUG00000035314) #19 ENSSTUG00000035307 DDAH1 (ENSSTUG00000035290) #20 zgc:65873 (ENSSTUG00000035280) #22 SYDE2 (ENSSTUG00000035266) #23 DNAI3 (ENSSTUG00000034721) #24 MCOLN3 (ENSSTUG00000034558) #25 gpsm2l (ENSSTUG00000034497) stxbp3 (ENSSTUG00000034280) ENSSTUG00000034243 ENSSTUG00000034233 ENSSTUG00000034219 henmt1 (ENSSTUG00000034206) EEIG2 (ENSSTUG00000034156) slc25a24 (ENSSTUG00000034006) tmem69 (ENSSTUG00000033986) GPBP1L1 (ENSSTUG00000033965) nasp (ENSSTUG00000033895) akr1a1b (ENSSTUG00000033703) Atlantic salmon MODERN SPECIES 1 lepr (ENSSSAG00000062407) PDE4B (ENSSSAG00000081191) dnai4 (ENSSSAG00000054811) SGIP1 (ENSSSAG00000054865) ttc4 (ENSSSAG00000087168) ENSSSAG00000054408 lurap1 (ENSSSAG00000054386) CLCA1 (ENSSSAG00000053363) #13 CLCA1 (ENSSSAG00000051653) #13 ENSSSAG00000084482 ENSSSAG00000051635 znhit6 (ENSSSAG00000051624) #18 ccn1 (ENSSSAG00000051615) #19 ENSSSAG00000051612 DDAH1 (ENSSSAG00000051602) #20 cssa10h1orf52 (ENSSSAG00000051594) #22 SYDE2 (ENSSSAG00000051582) #23 DNAI3 (ENSSSAG00000051440) #24 MCOLN3 (ENSSSAG00000051278) #25 gpsm2 (ENSSSAG00000051219) stxbp3 (ENSSSAG00000050706) ENSSSAG00000050650 ENSSSAG00000050609 ENSSSAG00000049818 tmem69 (ENSSSAG00000097305) GPBP1L1 (ENSSSAG00000049768) ENSSSAG00000083052 nasp (ENSSSAG00000049742) akr1a1b (ENSSSAG00000048602) aldh9a1a.1 (ENSSSAG00000048354) tmco1 (ENSSSAG00000048318) Oncorhynchus ANCESTRAL SPECIES 8 ENSGT00940000155190.bb.a.h ENSGT00940000156301.a.a.c.a ENSGT00940000156209 ENSGT00390000010922.i ENSGT00510000049371.n ENSGT00390000007658 ENSGT00530000063790.a.a.d ENSGT00940000154682.C.x #13 ENSGT00940000154682.C.w #13 ENSGT00940000163583.z ENSGT00940000163583.y.b ENSGT00390000017201 #18 ENSGT00940000155151.b.d.e #19 ENSGT01060000249603 ENSGT00940000157892.m #20 ENSGT00390000017398.y #22 ENSGT01030000234635.a.a.a.a.f #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a.f ENSGT00940000157607.k.b ENSGT00390000004798 ENSGT00940000156132.h ENSGT00940000164927.a ENSGT00390000015318.b ENSGT00420000029753.b.ab ENSGT00390000016650.c.a.d ENSGT00940000156539.w ENSGT00940000163309 ENSGT00390000002659 ENSGT01020000230412.A.c.b.c.a.d Rainbow trout MODERN SPECIES 26 ENSOMYG00000069436 ENSOMYG00000068053 lurap1 (ENSOMYG00000050470) CLCA1 (ENSOMYG00000050136) #13 CLCA1 (ENSOMYG00000055714) #13 CLCA1 (ENSOMYG00000063943) #13 ENSOMYG00000059961 CLCA1 (ENSOMYG00000003173) #13 ENSOMYG00000002836 ENSOMYG00000002753 ZNHIT6 (ENSOMYG00000002740) #18 ccn1 (ENSOMYG00000002715) #19 ENSOMYG00000002703 ENSOMYG00000071353 DDAH1 (ENSOMYG00000002691) #20 zgc:65873 (ENSOMYG00000054722) #22 ENSOMYG00000072958 ENSOMYG00000074834 SYDE2 (ENSOMYG00000002580) #23 DNAI3 (ENSOMYG00000002501) #24 MCOLN3 (ENSOMYG00000002152) #25 ENSOMYG00000001936 STXBP3 (ENSOMYG00000001744) ENSOMYG00000061737 ENSOMYG00000001442 ENSOMYG00000068656 ENSOMYG00000001357 ENSOMYG00000001285 EEIG2 (ENSOMYG00000001254) ENSOMYG00000001190 tmem69 (ENSOMYG00000001156) Oncorhynchus_a ANCESTRAL SPECIES 14 ENSGT00940000158755.j ENSGT00730000111209.r ENSGT00940000155190.bb.a.h ENSGT00940000156301.a.a.c.a ENSGT00940000156209 ENSGT00510000049371.n ENSGT00390000007658 ENSGT00530000063790.a.a.d ENSGT00940000154682.C.w #13 ENSGT00940000163583.z ENSGT00940000163583.y.b ENSGT00390000017201 #18 ENSGT00940000155151.b.d.e #19 ENSGT01060000249603 ENSGT00940000157892.m #20 ENSGT00390000017398.y #22 ENSGT01030000234635.a.a.a.a.f #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000154667.b.a.f ENSGT00940000157607.k.b ENSGT00940000157064.a.b.b.a.a ENSGT00390000004798 ENSGT00940000156132.h ENSGT00940000164927.a ENSGT00390000015318.b ENSGT00420000029753.b.ab ENSGT00390000016650.c.a.d ENSGT00940000156539.w ENSGT00940000163309 ENSGT00390000002659 Coho salmon MODERN SPECIES 4 lepr (ENSOKIG00005013530) PDE4B (ENSOKIG00005013669) ENSOKIG00005014046 SGIP1 (ENSOKIG00005014061) dnai4 (ENSOKIG00005014149) ttc4 (ENSOKIG00005014176) TTC22 (ENSOKIG00005014214) lurap1 (ENSOKIG00005014311) clca1 (ENSOKIG00005014337) #13 ENSOKIG00005014479 ENSOKIG00005014513 ZNHIT6 (ENSOKIG00005014528) #18 ccn1 (ENSOKIG00005014545) #19 ENSOKIG00005014572 DDAH1 (ENSOKIG00005014579) #20 zgc:65873 (ENSOKIG00005014589) #22 SYDE2 (ENSOKIG00005014599) #23 DNAI3 (ENSOKIG00005014634) #24 MCOLN3 (ENSOKIG00005015107) #25 gpsm2l (ENSOKIG00005015185) STXBP3 (ENSOKIG00005015333) ENSOKIG00005015747 ENSOKIG00005015758 henmt1 (ENSOKIG00005015785) fam102bb (ENSOKIG00005015797) slc25a24 (ENSOKIG00005015831) tmem69 (ENSOKIG00005015906) GPBP1L1 (ENSOKIG00005015911) nasp (ENSOKIG00005015929) akr1a1b (ENSOKIG00005016001) aldh9a1a.1 (ENSOKIG00005016229) Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 57 ENSOTSG00005027510 ENSOTSG00005027509 ENSOTSG00005027508 SGIP1 (ENSOTSG00005027504) dnai4 (ENSOTSG00005027500) ttc4 (ENSOTSG00005027476) TTC22 (ENSOTSG00005027469) lurap1 (ENSOTSG00005027468) CLCA1 (ENSOTSG00005027227) #13 ENSOTSG00005027222 ENSOTSG00005027218 ZNHIT6 (ENSOTSG00005027216) #18 ccn1 (ENSOTSG00005027214) #19 ENSOTSG00005027213 DDAH1 (ENSOTSG00005027211) #20 zgc:65873 (ENSOTSG00005027209) #22 SYDE2 (ENSOTSG00005027207) #23 DNAI3 (ENSOTSG00005027171) #24 MCOLN3 (ENSOTSG00005027154) #25 gpsm2l (ENSOTSG00005027060) STXBP3 (ENSOTSG00005027030) ENSOTSG00005027028 btg1 (ENSOTSG00005027027) fam3c (ENSOTSG00005027026) ENSOTSG00005027025 ENSOTSG00005027024 impdh1b (ENSOTSG00005027023) ENSOTSG00005027021 ENSOTSG00005027020 impdh1b (ENSOTSG00005024879) fam3c (ENSOTSG00005024866) Chinook salmon MODERN SPECIES 2924 ENSOTSG00005030189 ENSOTSG00005030190 ENSOTSG00005030193 SGIP1 (ENSOTSG00005030196) dnai4 (ENSOTSG00005030202) ttc4 (ENSOTSG00005030208) TTC22 (ENSOTSG00005030256) lurap1 (ENSOTSG00005030536) CLCA1 (ENSOTSG00005030540) #13 ENSOTSG00005030984 ENSOTSG00005030989 ZNHIT6 (ENSOTSG00005026731) #18 ccn1 (ENSOTSG00005026732) #19 ENSOTSG00005026733 DDAH1 (ENSOTSG00005026734) #20 zgc:65873 (ENSOTSG00005026737) #22 SYDE2 (ENSOTSG00005026742) #23 DNAI3 (ENSOTSG00005026747) #24 MCOLN3 (ENSOTSG00005026755) #25 ENSOTSG00005026792 STXBP3 (ENSOTSG00005026808) btg1 (ENSOTSG00005026819) fam3c (ENSOTSG00005026820) ENSOTSG00005026821 impdh1b (ENSOTSG00005026822) ENSOTSG00005026823 Huchen MODERN SPECIES 724 zgc:65873 (ENSHHUG00000006998) #22 SYDE2 (ENSHHUG00000007007) #23 DNAI3 (ENSHHUG00000007013) #24 MCOLN3 (ENSHHUG00000007031) #25 gpsm2l (ENSHHUG00000007060) stxbp3 (ENSHHUG00000007080) ENSHHUG00000007118 ENSHHUG00000007121 ENSHHUG00000007127 ENSHHUG00000007132 ENSHHUG00000007138 henmt1 (ENSHHUG00000007146) fam102bb (ENSHHUG00000007155) slc25a24 (ENSHHUG00000007181) tmem69 (ENSHHUG00000007322) GPBP1L1 (ENSHHUG00000007326) Salmoninae ANCESTRAL SPECIES 576 ENSGT00510000049371.m ENSGT00530000063790.a.a.c ENSGT00940000163583.y.a ENSGT00940000155151.b.d.f #19 ENSGT00940000157892.n #20 ENSGT00390000017398.z #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a.e #23 ENSGT00940000154667.b.a.e ENSGT00940000157607.k.a ENSGT00940000157607.l ENSGT00390000004674.i.b ENSGT00940000167241 ENSGT00390000016650.c.a.c ENSGT00940000156539.x ENSGT01020000230412.A.c.b.c.a.c ENSGT00390000003156.b.e Salmoninae_a ANCESTRAL SPECIES 46 ENSGT00940000157568.g.a ENSGT00940000158648.h ENSGT00940000157092.v.a.b ENSGT00940000154568.ib ENSGT00940000158755.j ENSGT00730000111209.r ENSGT00940000155190.bb.a.h ENSGT00940000156301.a.a.c.a ENSGT00940000156209 ENSGT00390000010922 ENSGT00510000049371.m ENSGT00530000063790.a.a.c ENSGT00940000163583.y.a ENSGT00940000155151.b.d.f #19 ENSGT00940000157892.n #20 ENSGT00390000017398.z #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a.e #23 ENSGT00940000154667.b.a.e ENSGT00940000157607.l ENSGT00390000004674.i.b ENSGT00940000167241 ENSGT00390000016650.c.a.c ENSGT00940000156539.x ENSGT01020000230412.A.c.b.c.a.c ENSGT00390000003156.b.e ENSGT00940000154327.b.f.d ENSGT00940000160740.f ENSGT00940000156988.i ENSGT00950000182879.a.b.b ENSGT00940000166873.f Salmo ANCESTRAL SPECIES 20 ENSGT00940000157568.g.a ENSGT00940000158648.h ENSGT00940000157092.v.a.b ENSGT00940000154568.ib ENSGT00940000158755.j ENSGT00730000111209.r ENSGT00940000155190.bb.a.h ENSGT00940000156301.a.a.c.a ENSGT00940000156209 ENSGT00390000010922 ENSGT00510000049371.m ENSGT00530000063790.a.a.c ENSGT00940000163583.y.a ENSGT00940000155151.b.d.f #19 ENSGT00940000157892.n #20 ENSGT00390000017398.z #22 ENSGT01030000234635.a.a.a.a.e #23 ENSGT00940000154667.b.a.e ENSGT00940000157607.l ENSGT00390000004674.i.b ENSGT00940000167241 ENSGT00390000016650.c.a.c ENSGT00940000156539.x ENSGT01020000230412.A.c.b.c.a.c ENSGT00390000003156.b.e ENSGT00940000154327.b.f.d ENSGT00940000160740.f ENSGT00940000156988.i ENSGT00950000182879.a.b.b ENSGT00940000166873.f ENSGT00940000161068.f Atlantic salmon MODERN SPECIES 15 ak4 (ENSSSAG00000063104) DNAJC6 (ENSSSAG00000081120) ENSSSAG00000096443 lepr2 (ENSSSAG00000081132) PDE4B (ENSSSAG00000055457) SGIP1 (ENSSSAG00000081219) insl5a (ENSSSAG00000081225) ENSSSAG00000116821 ENSSSAG00000121704 pars2 (ENSSSAG00000054727) lurap1 (ENSSSAG00000008690) ENSSSAG00000008705 ENSSSAG00000100007 cef10 (ENSSSAG00000008740) #19 DDAH1 (ENSSSAG00000008768) #20 C1orf52 (ENSSSAG00000119602) #22 SYDE2 (ENSSSAG00000008799) #23 ENSSSAG00000008827 ENSSSAG00000008944 ENSSSAG00000009023 ENSSSAG00000009055 ENSSSAG00000009085 AK1A1 (ENSSSAG00000009168) ENSSSAG00000009560 ENSSSAG00000009680 ENSSSAG00000096548 ENSSSAG00000103073 ENSSSAG00000009691 ENSSSAG00000009753 ENSSSAG00000010109 ENSSSAG00000113270 River trout MODERN SPECIES 33 RAVER2 (ENSSTUG00000014126) jak1 (ENSSTUG00000014197) ak4 (ENSSTUG00000014575) DNAJC6 (ENSSTUG00000014598) lepr (ENSSTUG00000014647) PDE4B (ENSSTUG00000014883) SGIP1 (ENSSTUG00000015115) ENSSTUG00000015164 ENSSTUG00000015172 ttc4 (ENSSTUG00000015182) lurap1 (ENSSTUG00000015246) ENSSTUG00000015254 ENSSTUG00000015287 ccn1 (ENSSTUG00000015301) #19 DDAH1 (ENSSTUG00000015326) #20 zgc:65873 (ENSSTUG00000015342) #22 ENSSTUG00000015355 #23 ENSSTUG00000015363 ENSSTUG00000015410 ENSSTUG00000015424 FNDC7 (ENSSTUG00000015443) ENSSTUG00000015506 nasp (ENSSTUG00000015527) akr1a1b (ENSSTUG00000015577) uck2a (ENSSTUG00000015820) magoh (ENSSTUG00000015891) scp2b (ENSSTUG00000015898) PODN (ENSSTUG00000015912) ENSSTUG00000015959 cyp2p6 (ENSSTUG00000016912) ENSSTUG00000016937 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155715.nb.a ENSGT00940000158648.g ENSGT00940000157092.v.a.a ENSGT00940000154568.hb ENSGT00940000158755.i ENSGT00730000111209.q ENSGT00940000155190.bb.a.g ENSGT00940000156301.a.a.c.b ENSGT00940000174981 ENSGT00390000010922.j ENSGT00510000049371.m ENSGT00530000063790.a.a.c ENSGT00940000163583.y.a ENSGT00940000155151.b.d.f #19 ENSGT00940000157892.n #20 ENSGT00390000017398.z #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a.e #23 ENSGT00940000154667.b.a.e ENSGT00940000157607.l ENSGT00390000004674.i.b ENSGT01010000224837 ENSGT00390000016650.c.a.c ENSGT00940000156539.x ENSGT01020000230412.A.c.b.c.a.c ENSGT00390000003156.b.e ENSGT00940000154327.b.f.d ENSGT00940000160740.f ENSGT00940000156988.i ENSGT00950000182879.a.b.b ENSGT00940000166873.f Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000158648.g ENSGT00940000157092.v.a.a ENSGT00940000154568.hb ENSGT00940000158755.i ENSGT00730000111209.q ENSGT00940000155190.bb.a.g ENSGT00940000156301.a.a.c.b ENSGT00940000174981 ENSGT00390000010922.j ENSGT00510000049371.m ENSGT00530000063790.a.a.c ENSGT00940000163514.C ENSGT00940000163583.y.a ENSGT00940000155151.b.d.f #19 ENSGT00940000157892.n #20 ENSGT00390000017398.z #22 ENSGT00990000211775 ENSGT01030000234635.a.a.a.a.e #23 ENSGT00940000154667.b.a.e ENSGT00940000157607.l ENSGT00390000004674.i.b ENSGT01010000224837 ENSGT00390000016650.c.a.c ENSGT00940000156539.x ENSGT01020000230412.A.c.b.c.a.c ENSGT00390000003156.b.e ENSGT00940000154327.b.f.d ENSGT00940000160740.f ENSGT00940000156988.i ENSGT00950000182879.a.b.b ENSGT00940000166873.f Chinook salmon MODERN SPECIES jak1 (ENSOTSG00005008868) ak4 (ENSOTSG00005008845) ENSOTSG00005008844 DNAJC6 (ENSOTSG00005008843) lepr (ENSOTSG00005008832) PDE4B (ENSOTSG00005008821) SGIP1 (ENSOTSG00005008819) ENSOTSG00005008818 pars2 (ENSOTSG00005008817) ttc4 (ENSOTSG00005008816) lurap1 (ENSOTSG00005008815) ENSOTSG00005008814 ENSOTSG00005008813 ccn1 (ENSOTSG00005008812) #19 DDAH1 (ENSOTSG00005008808) #20 zgc:65873 (ENSOTSG00005008806) #22 SYDE2 (ENSOTSG00005008804) #23 ENSOTSG00005008802 ENSOTSG00005008800 FNDC7 (ENSOTSG00005008797) ENSOTSG00005008795 ENSOTSG00005008793 nasp (ENSOTSG00005008792) akr1a1b (ENSOTSG00005008790) uck2a (ENSOTSG00005008787) magoh (ENSOTSG00005008783) scp2b (ENSOTSG00005008781) PODN (ENSOTSG00005008779) TUT4 (ENSOTSG00005001603) cyp2p6 (ENSOTSG00005001551) ENSOTSG00005001548 Coho salmon MODERN SPECIES 1 ak4 (ENSOKIG00005030393) ENSOKIG00005030383 DNAJC6 (ENSOKIG00005030365) ENSOKIG00005030352 lepr (ENSOKIG00005029873) PDE4B (ENSOKIG00005029281) SGIP1 (ENSOKIG00005029132) ENSOKIG00005029116 pars2 (ENSOKIG00005029102) ttc4 (ENSOKIG00005029066) lurap1 (ENSOKIG00005029017) ENSOKIG00005029005 ENSOKIG00005028989 CCN1 (ENSOKIG00005028956) #19 DDAH1 (ENSOKIG00005028932) #20 C1orf52 (ENSOKIG00005028919) #22 ENSOKIG00005028912 ENSOKIG00005028882 #23 ENSOKIG00005028846 ENSOKIG00005028837 FNDC7 (ENSOKIG00005028825) ENSOKIG00005028817 ENSOKIG00005028777 AKR1A1 (ENSOKIG00005028709) UCK2 (ENSOKIG00005028583) ENSOKIG00005028534 ENSOKIG00005028525 PODN (ENSOKIG00005028507) TUT4 (ENSOKIG00005028082) cyp2p6 (ENSOKIG00005027996) ENSOKIG00005027923 Rainbow trout MODERN SPECIES 22 ENSOMYG00000076689 lepr (ENSOMYG00000000549) PDE4B (ENSOMYG00000000343) ENSOMYG00000050390 SGIP1 (ENSOMYG00000074909) ENSOMYG00000035820 pars2 (ENSOMYG00000053304) ttc4 (ENSOMYG00000035790) ENSOMYG00000035778 lurap1 (ENSOMYG00000035776) ENSOMYG00000035756 ENSOMYG00000035737 CCN1 (ENSOMYG00000035727) #19 ENSOMYG00000076395 DDAH1 (ENSOMYG00000035708) #20 C1orf52 (ENSOMYG00000057298) #22 ENSOMYG00000055558 ENSOMYG00000062611 SYDE2 (ENSOMYG00000074687) #23 ENSOMYG00000035648 ENSOMYG00000035620 ENSOMYG00000051472 ENSOMYG00000035615 ENSOMYG00000035589 ENSOMYG00000035570 ENSOMYG00000035523 ENSOMYG00000035492 ENSOMYG00000035481 ENSOMYG00000073060 ENSOMYG00000035469 ENSOMYG00000033780 Huchen MODERN SPECIES 229 PDE4B (ENSHHUG00000036414) ENSHHUG00000036481 SGIP1 (ENSHHUG00000036486) ENSHHUG00000036502 ttc4 (ENSHHUG00000036522) lurap1 (ENSHHUG00000036530) ENSHHUG00000036533 ENSHHUG00000036547 ENSHHUG00000036556 ENSHHUG00000036590 ENSHHUG00000036594 ccn1 (ENSHHUG00000025658) #19 DDAH1 (ENSHHUG00000025660) #20 zgc:65873 (ENSHHUG00000025663) #22 Northern pike MODERN SPECIES 7 DNAJC6 (ENSELUG00000022502) lepr (ENSELUG00000022567) ENSELUG00000025775 PDE4B (ENSELUG00000022680) SGIP1 (ENSELUG00000022736) insl5a (ENSELUG00000022758) dnai4 (ENSELUG00000022844) ttc4 (ENSELUG00000022921) TTC22 (ENSELUG00000022941) lurap1 (ENSELUG00000022952) ENSELUG00000031759 ENSELUG00000022977 ZNHIT6 (ENSELUG00000023035) #18 ccn1 (ENSELUG00000023051) #19 DDAH1 (ENSELUG00000023108) #20 zgc:65873 (ENSELUG00000023125) #22 SYDE2 (ENSELUG00000023134) #23 DNAI3 (ENSELUG00000023142) #24 MCOLN3 (ENSELUG00000023196) #25 ENSELUG00000023255 stxbp3 (ENSELUG00000023333) FNDC7 (ENSELUG00000023352) ENSELUG00000023457 henmt1 (ENSELUG00000023477) fam102bb (ENSELUG00000023557) slc25a24 (ENSELUG00000023588) tmem69 (ENSELUG00000023591) GPBP1L1 (ENSELUG00000023599) ENSELUG00000023609 akr1a1 (ENSELUG00000023830) nasp (ENSELUG00000023668) Otomorpha ANCESTRAL SPECIES 375 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b.d #19 ENSGT00940000157892 #20 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00950000182879.a.a ENSGT00950000182879.b ENSGT00940000156988 ENSGT00940000159127 ENSGT00940000161304.a.a ENSGT00940000156073.c.b ENSGT00940000160740 ENSGT00940000154327.b.f Otophysi ANCESTRAL SPECIES 307 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b.d #19 ENSGT00940000157892 #20 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00950000182879.a.a ENSGT00950000182879.b ENSGT00940000156988 ENSGT00940000159127 ENSGT00940000161304.a.a ENSGT00940000156073.c.b ENSGT00940000160740 ENSGT00940000154327.b.f Characiphysae ANCESTRAL SPECIES 16 ENSGT00940000157014.e ENSGT00970000193390.c.a.a.a.a.a.b ENSGT00420000030545.f ENSGT00390000011932 ENSGT00940000163277 ENSGT00940000159922.a.b ENSGT00390000015089.cb.a ENSGT00390000013722 ENSGT00940000156171.h.f ENSGT00390000004396.h ENSGT00940000156633.d.b ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b.d #19 ENSGT00940000157892 #20 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00950000182879.a.a ENSGT00950000182879.b ENSGT00940000156988 ENSGT00940000159127 ENSGT00940000161304.a.a ENSGT00940000156073.c.b ENSGT00940000160740 ENSGT00940000154327.b.f ENSGT00940000163807 ENSGT00950000182963.b.a.c ENSGT00940000158080 ENSGT00940000160862 Channel catfish MODERN SPECIES 6 otud4 (ENSIPUG00000002200) abce1 (ENSIPUG00000002215) ENSIPUG00000002283 ANAPC10 (ENSIPUG00000002302) rnf150 (ENSIPUG00000002313) ENSIPUG00000002326 ENSIPUG00000002359 PPM1K (ENSIPUG00000002362) ENSIPUG00000002386 ENSIPUG00000002422 ENSIPUG00000002435 ENSIPUG00000002450 ENSIPUG00000002457 #18 CYR61 (ENSIPUG00000002490) #19 DDAH1 (ENSIPUG00000002503) #20 c15h1orf52 (ENSIPUG00000002520) #22 syde2 (ENSIPUG00000002528) #23 DNAI3 (ENSIPUG00000002543) #24 mcoln3 (ENSIPUG00000002593) #25 cyp2aa4 (ENSIPUG00000002621) zcchc11 (ENSIPUG00000002638) GPX7 (ENSIPUG00000002659) SHISAL2A (ENSIPUG00000002668) slc1a7b (ENSIPUG00000002676) podn (ENSIPUG00000002686) scp2b (ENSIPUG00000002702) ENSIPUG00000002714 NHS (ENSIPUG00000002726) ENSIPUG00000002736 tmem27 (ENSIPUG00000002753) Mdp1 (ENSIPUG00000002764) Characiphysae_b ANCESTRAL SPECIES 192 ENSGT00970000193390.c.a.a.a.a.a.b.b ENSGT00420000030545.f ENSGT00390000011932 ENSGT00940000163277 ENSGT00940000159922.a.b ENSGT00390000015089.cb.a ENSGT00390000013722 ENSGT00940000156171.h.f ENSGT00390000004396.h ENSGT00940000156633.d.b ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b.d #19 ENSGT00940000157892 #20 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 Characoidei ANCESTRAL SPECIES 254 ENSGT00390000011932 ENSGT00940000163277 ENSGT00940000159922.a.b ENSGT00390000015089.cb.a ENSGT00390000013722 ENSGT00940000156171.h.f ENSGT00390000004396.h ENSGT00940000156633.d.b ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b.d #19 ENSGT00940000157892 #20 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 Red-bellied piranha MODERN SPECIES 410 ENSPNAG00000001195 ENSPNAG00000008770 abce1 (ENSPNAG00000008746) anapc10 (ENSPNAG00000008705) ENSPNAG00000008646 rnf150b (ENSPNAG00000001050) ENSPNAG00000008481 ENSPNAG00000001004 PPM1K (ENSPNAG00000008429) ENSPNAG00000000991 ENSPNAG00000000984 ENSPNAG00000008413 #18 ccn1 (ENSPNAG00000000965) #19 DDAH1 (ENSPNAG00000000952) #20 zgc:65873 (ENSPNAG00000008384) #22 SYDE2 (ENSPNAG00000008372) #23 DNAI3 (ENSPNAG00000008361) #24 MCOLN3 (ENSPNAG00000008347) #25 ENSPNAG00000000897 ENSPNAG00000008309 ENSPNAG00000000871 ENSPNAG00000000861 Mexicana tetra MODERN SPECIES 6 ENSAMXG00000031483 abce1 (ENSAMXG00000005866) anapc10 (ENSAMXG00000005332) rnf150b (ENSAMXG00000037968) ENSAMXG00000029406 ENSAMXG00000025919 PPM1K (ENSAMXG00000043893) ENSAMXG00000033462 ENSAMXG00000036248 ENSAMXG00000005211 ENSAMXG00000036259 ENSAMXG00000032393 ENSAMXG00000038881 #18 ccn1 (ENSAMXG00000018010) #19 DDAH1 (ENSAMXG00000004248) #20 zgc:65873 (ENSAMXG00000031697) #22 SYDE2 (ENSAMXG00000004233) #23 DNAI3 (ENSAMXG00000004204) #24 MCOLN3 (ENSAMXG00000004172) #25 ENSAMXG00000037527 PLXNA1 (ENSAMXG00000004133) chchd6a (ENSAMXG00000038765) sars1 (ENSAMXG00000016507) ENSAMXG00000039581 fam50a (ENSAMXG00000016532) tmed4 (ENSAMXG00000035904) plpbp (ENSAMXG00000037006) snrpg (ENSAMXG00000030568) ENSAMXG00000038253 COQ10A (ENSAMXG00000036699) cs (ENSAMXG00000016547) Electric eel MODERN SPECIES 851 zgc:65873 (ENSEEEG00000002546) #22 ENSEEEG00000002553 #23 ENSEEEG00000002555 #24 MCOLN3 (ENSEEEG00000002559) #25 ENSEEEG00000002567 ENSEEEG00000002569 ENSEEEG00000002637 Cyprinoidei ANCESTRAL SPECIES 121 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b.d #19 ENSGT00940000157892 #20 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000166038 ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.a ENSGT00390000006172 ENSGT00390000007662.d.a ENSGT00940000164952 ENSGT00940000155473.c.a.e ENSGT00940000155473.c.a.f ENSGT00940000169945 ENSGT00940000177895.a ENSGT01100000263512.a.a.b.a ENSGT00940000155201.d ENSGT00950000182936.a.a.b.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 653 ENSGT00940000163583.fc.b ENSGT00390000017201 #18 ENSGT00940000155151.b.d.c #19 ENSGT00940000155151.b.d.d #19 ENSGT00940000157892.k #20 ENSGT00390000017398.`b #22 ENSGT01030000234635.a.a.a.a.g #23 ENSGT00940000166038.b ENSGT00390000006172.b ENSGT00390000007662.d.a.b ENSGT00940000164952 ENSGT00940000155473.c.a.e ENSGT00940000169945.a ENSGT00940000177895.a Goldfish MODERN SPECIES 42 CPNE9 (ENSCARG00000041270) klf15 (ENSCARG00000041882) ENSCARG00000041918 ENSCARG00000042298 COPZ1 (ENSCARG00000042312) nfe2 (ENSCARG00000042374) ENSCARG00000042393 ENSCARG00000042442 jph2 (ENSCARG00000042619) GDAP1L1 (ENSCARG00000042640) ENSCARG00000042685 ENSCARG00000042695 ENSCARG00000042710 ccn1 (ENSCARG00000042726) #19 DDAH1 (ENSCARG00000042746) #20 zgc:65873 (ENSCARG00000042765) #22 ENSCARG00000042780 #23 abcg2a (ENSCARG00000042810) fbxl5 (ENSCARG00000042883) syap1 (ENSCARG00000043007) lmnl3 (ENSCARG00000043057) VDR (ENSCARG00000043133) ENSCARG00000043522 ENSCARG00000043541 NFXL1 (ENSCARG00000043585) CNGA1 (ENSCARG00000044617) ENSCARG00000044662 st8sia7.1 (ENSCARG00000044681) atp1b2a (ENSCARG00000044729) zgc:153012 (ENSCARG00000044772) ENSCARG00000044784 Cyprininae_a ANCESTRAL SPECIES 235 ENSGT00940000163583.fc.b ENSGT00390000017201 #18 ENSGT00940000155151.b.d.c #19 ENSGT00940000155151.b.d.d #19 ENSGT00940000157892.k #20 ENSGT00390000017398.`b #22 ENSGT01030000234635.a.a.a.a.g #23 ENSGT00940000166038.b ENSGT00390000006172.b ENSGT00390000007662.d.a.b ENSGT00940000164952 ENSGT00940000155473.c.a.e ENSGT00940000169945.a ENSGT00940000177895.a ENSGT00930000151815 ENSGT00940000154895.a.a.f ENSGT00530000063713.b.b.d ENSGT00940000165075.b.b ENSGT00950000183109.d.e.b.j ENSGT00950000182810.B.b.a.b.h ENSGT00940000163785.a.a.a Common carp reference MODERN SPECIES 11 ENSCCRG00000044919 anapc10 (ENSCCRG00000078687) rnf150b (ENSCCRG00000036451) ENSCCRG00000057574 ENSCCRG00000063803 ENSCCRG00000036444 ENSCCRG00000036867 ENSCCRG00000060490 ENSCCRG00000055491 ENSCCRG00000031145 ENSCCRG00000057677 ENSCCRG00000013448 ENSCCRG00000058887 CCN1 (ENSCCRG00000063925) #19 DDAH1 (ENSCCRG00000079519) #20 C1orf52 (ENSCCRG00000069135) #22 SYDE2 (ENSCCRG00000063985) #23 abcg2a (ENSCCRG00000054299) fbxl5 (ENSCCRG00000032202) syap1 (ENSCCRG00000039646) lmnl3 (ENSCCRG00000039638) ENSCCRG00000060405 ENSCCRG00000058211 ENSCCRG00000072607 ENSCCRG00000029897 ENSCCRG00000080711 egr4 (ENSCCRG00000054665) ENSCCRG00000074710 ENSCCRG00000048551 ENSCCRG00000055026 ENSCCRG00000057075 Cyprininae ANCESTRAL SPECIES 375 ENSGT00940000157892.l #20 ENSGT00390000017398.ab #22 ENSGT01030000234635.a.a.a.a.h #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000166038.a.a.a ENSGT00940000166038.a.b ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.a.d ENSGT00940000166038.a.a.b ENSGT00940000155473.c.a.f ENSGT00940000169945.b ENSGT01100000263512.a.a.b.a ENSGT00940000155201.d ENSGT00950000182936.a.a.b.b ENSGT00940000155694.h ENSGT00940000154895.a.a.e ENSGT00530000063713.b.b Cyprininae_a ANCESTRAL SPECIES 327 ENSGT00940000157892.l #20 ENSGT00390000017398.ab #22 ENSGT01030000234635.a.a.a.a.h #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000166038.a.a.a ENSGT00940000166038.a.b ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.b.e.a.d ENSGT00390000006172.a ENSGT00390000007662.d.a.a ENSGT00940000155473.c.a.f ENSGT00940000169945.b ENSGT01100000263512.a.a.b.a ENSGT00940000155201.d ENSGT00950000182936.a.a.b.b ENSGT00940000155694.h ENSGT00940000154895.a.a.e Common carp reference MODERN SPECIES 49 RS1 (ENSCCRG00000031860) ENSCCRG00000073906 ENSCCRG00000038408 ENSCCRG00000070020 ENSCCRG00000038432 ENSCCRG00000065242 ENSCCRG00000070862 ENSCCRG00000031904 btr32 (ENSCCRG00000070848) btr31 (ENSCCRG00000052519) ENSCCRG00000058294 ENSCCRG00000062052 ENSCCRG00000064379 #18 ccn1 (ENSCCRG00000047288) #19 DDAH1 (ENSCCRG00000077632) #20 zgc:65873 (ENSCCRG00000067528) #22 SYDE2 (ENSCCRG00000077321) #23 DNAI3 (ENSCCRG00000021843) #24 MCOLN3 (ENSCCRG00000021946) #25 abcg2a (ENSCCRG00000061243) abcg2a (ENSCCRG00000062754) abcg2a (ENSCCRG00000071554) ENSCCRG00000032180 ENSCCRG00000049730 ENSCCRG00000074695 ENSCCRG00000032508 ednrab (ENSCCRG00000055574) ENSCCRG00000043348 ENSCCRG00000059494 ENSCCRG00000081249 ENSCCRG00000059329 Golden-line barbel MODERN SPECIES 1483 DDAH1 (ENSSGRG00000010339) #20 zgc:65873 (ENSSGRG00000010338) #22 ENSSGRG00000010336 #23 DNAI3 (ENSSGRG00000010335) #24 MCOLN3 (ENSSGRG00000010325) #25 abcg2a (ENSSGRG00000010230) Zebrafish MODERN SPECIES 15 zgc:162858 (ENSDARG00000098990) tgm1l4 (ENSDARG00000101407) btr31 (ENSDARG00000096304) btr32 (ENSDARG00000053940) ENSDARG00000069904 ddah1 (ENSDARG00000103042) #20 C23H1orf52 (ENSDARG00000103134) #22 SYDE2 (ENSDARG00000099479) #23 DNAI3 (ENSDARG00000105093) #24 MCOLN3 (ENSDARG00000102050) #25 abcg2a (ENSDARG00000100075) ENSDARG00000095825 fbxl5 (ENSDARG00000043046) syap1 (ENSDARG00000012946) lmnl3 (ENSDARG00000007751) VDR (ENSDARG00000099483) VDR (ENSDARG00000112923) ENSDARG00000033955 ednrab (ENSDARG00000062262) ENSDARG00000102585 ENSDARG00000102845 ENSDARG00000076310 Clupeiformes ANCESTRAL SPECIES 132 ENSGT00940000163583 ENSGT00390000017201 #18 ENSGT00940000155151.b.d #19 ENSGT00940000157892 #20 ENSGT00390000017398 #22 ENSGT01030000234635.a.a.a.a #23 ENSGT00940000156924 #24 ENSGT00950000183036.a.a.g #25 ENSGT00940000156988 ENSGT00940000159127 ENSGT00940000161304.b ENSGT00940000156073.c.b ENSGT00940000160740 ENSGT00940000154327.b.f ENSGT00940000157285.f ENSGT00950000182993.B.a.d ENSGT00940000156897 ENSGT00390000015908 ENSGT00960000186850 ENSGT00940000163316 Atlantic herring MODERN SPECIES 1 FCHO1 (ENSCHAG00000006957) ENSCHAG00000006946 ENSCHAG00000006552 sft2d2a (ENSCHAG00000006485) tmem45a (ENSCHAG00000006462) sin3b (ENSCHAG00000003941) ENSCHAG00000003826 ENSCHAG00000003613 ENSCHAG00000003558 ENSCHAG00000003528 ENSCHAG00000003466 ENSCHAG00000003450 ZNHIT6 (ENSCHAG00000003417) #18 ccn1 (ENSCHAG00000003344) #19 DDAH1 (ENSCHAG00000003298) #20 zgc:65873 (ENSCHAG00000003283) #22 SYDE2 (ENSCHAG00000003262) #23 DNAI3 (ENSCHAG00000002741) #24 MCOLN3 (ENSCHAG00000002573) #25 ENSCHAG00000002365 ENSCHAG00000002339 ENSCHAG00000027331 ENSCHAG00000027326 mafaa (ENSCHAG00000027323) ENSCHAG00000027319 ENSCHAG00000027315 rnf2 (ENSCHAG00000027312) ENSCHAG00000027309 PRRX1 (ENSCHAG00000027306) mysm1 (ENSCHAG00000027300) OMA1 (ENSCHAG00000027297) Denticle herring MODERN SPECIES 4 comp (ENSDCDG00000026844) tmem38a (ENSDCDG00000028424) smim7 (ENSDCDG00000028425) MED26 (ENSDCDG00000028428) slc35e1 (ENSDCDG00000028431) mknk2b (ENSDCDG00000028441) mob3a (ENSDCDG00000028460) zap70 (ENSDCDG00000028469) adamts10 (ENSDCDG00000028512) shc2 (ENSDCDG00000028791) ENSDCDG00000028796 ENSDCDG00000028797 ENSDCDG00000028801 #18 ccn1 (ENSDCDG00000028805) #19 DDAH1 (ENSDCDG00000028808) #20 zgc:65873 (ENSDCDG00000028809) #22 ENSDCDG00000028810 #23 DNAI3 (ENSDCDG00000028812) #24 MCOLN3 (ENSDCDG00000028814) #25 ENSDCDG00000028827 TUT4 (ENSDCDG00000028878) gpx7 (ENSDCDG00000029788) slc1a7b (ENSDCDG00000029790) PODN (ENSDCDG00000029798) scp2b (ENSDCDG00000029799) st3gal3a (ENSDCDG00000029808) ENSDCDG00000029836 rad54l (ENSDCDG00000029850) ENSDCDG00000029894 ENSDCDG00000029900 uqcrh (ENSDCDG00000029902) Spotted gar MODERN SPECIES 648 lmo4b (ENSLOCG00000005105) hs2st1a (ENSLOCG00000005135) #7 selenof (ENSLOCG00000005156) #8 sh3glb1a (ENSLOCG00000005187) #9 ENSLOCG00000005198 #13 ENSLOCG00000005206 #13 ENSLOCG00000005218 #14 clca1 (ENSLOCG00000005234) #13 ENSLOCG00000005252 ODF2L (ENSLOCG00000005283) #15 ENSLOCG00000005315 ZNHIT6 (ENSLOCG00000005376) #18 ccn1 (ENSLOCG00000005392) #19 DDAH1 (ENSLOCG00000005404) #20 ENSLOCG00000005418 zgc:65873 (ENSLOCG00000005440) #22 SYDE2 (ENSLOCG00000005452) #23 DNAI3 (ENSLOCG00000005471) #24 MCOLN3 (ENSLOCG00000005502) #25 mcoln2 (ENSLOCG00000005533) ##25 LPAR3 (ENSLOCG00000005571) ENSLOCG00000005586 ssx2ipa (ENSLOCG00000005611) ENSLOCG00000005628 ENSLOCG00000005652 ENSLOCG00000005669 lurap1 (ENSLOCG00000005689) pomgnt1 (ENSLOCG00000005707) TSPAN1 (ENSLOCG00000005739) PIK3R3 (ENSLOCG00000005759) MAST2 (ENSLOCG00000005784) Reedfish MODERN SPECIES 1 med8 (ENSECRG00000009978) pbx1a (ENSECRG00000010004) glula (ENSECRG00000010055) ENSECRG00000010086 gadd45aa (ENSECRG00000010124) gng12a (ENSECRG00000010138) ENSECRG00000010149 wls (ENSECRG00000010158) ODF2L (ENSECRG00000010176) #15 ENSECRG00000010218 ENSECRG00000010301 ENSECRG00000010312 #18 ccn1 (ENSECRG00000010325) #19 DDAH1 (ENSECRG00000010335) #20 ENSECRG00000010341 zgc:65873 (ENSECRG00000010346) #22 SYDE2 (ENSECRG00000010356) #23 DNAI3 (ENSECRG00000010367) #24 MCOLN3 (ENSECRG00000010401) #25 mcoln2 (ENSECRG00000010417) ##25 ssx2ipa (ENSECRG00000010431) ENSECRG00000010454 ENSECRG00000010519 ENSECRG00000010620 ctbs (ENSECRG00000010655) SPATA1 (ENSECRG00000010664) gng5 (ENSECRG00000010670) rpf1 (ENSECRG00000010678) ENSECRG00000010687 DNASE2B (ENSECRG00000010698) uox (ENSECRG00000010715) Elephant shark MODERN SPECIES 1492 lmo4b (ENSCMIG00000008140) hs2st1a (ENSCMIG00000008142) #7 ENSCMIG00000008146 ##8 ENSCMIG00000008148 sh3glb1a (ENSCMIG00000008163) #9 CLCA1 (ENSCMIG00000008194) #13 ENSCMIG00000008248 #15 ENSCMIG00000008253 ENSCMIG00000008256 ENSCMIG00000008260 ENSCMIG00000008263 ENSCMIG00000008265 #18 ENSCMIG00000008267 ccn1 (ENSCMIG00000008269) #19 DDAH1 (ENSCMIG00000008274) #20 zgc:65873 (ENSCMIG00000008275) #22 SYDE2 (ENSCMIG00000008277) #23 DNAI3 (ENSCMIG00000008279) #24 MCOLN3 (ENSCMIG00000008299) #25 mcoln2 (ENSCMIG00000008343) ##25 lpar3 (ENSCMIG00000008360) ENSCMIG00000008366 ssx2ipa (ENSCMIG00000008382) ENSCMIG00000008446 ctbs (ENSCMIG00000008497) ENSCMIG00000008509 ENSCMIG00000008513 rpf1 (ENSCMIG00000008516) DNASE2B (ENSCMIG00000008519) uox (ENSCMIG00000008523) ENSCMIG00000008525