Euarchontoglires_A ANCESTRAL SPECIES 21 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000164144 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.a.n ##21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000165080 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Glires ANCESTRAL SPECIES 22 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000164144 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.a.n ##21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000165080 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Rodentia ANCESTRAL SPECIES 22 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000164144 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000165080 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Rodentia_B ANCESTRAL SPECIES 25 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00900000143638 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Myomorpha ANCESTRAL SPECIES 46 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00900000143638 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Muroidea ANCESTRAL SPECIES 68 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00900000143638 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Muroidea_A ANCESTRAL SPECIES 27 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00900000143638 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Cricetidae ANCESTRAL SPECIES 27 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00900000143638 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Cricetidae_B ANCESTRAL SPECIES 49 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00900000143638 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Northern American deer mouse MODERN SPECIES 15 Gsx1 (ENSPEMG00000004992) #7 Pdx1 (ENSPEMG00000001176) #8 Cdx2 (ENSPEMG00000000632) #9 Urad (ENSPEMG00000025423) #10 Flt3 (ENSPEMG00000012278) #11 Pan3 (ENSPEMG00000008992) #12 Flt1 (ENSPEMG00000019000) #13 ENSPEMG00000014341 #14 Slc46a3 (ENSPEMG00000014019) #15 ENSPEMG00000024696 #16 Mtus2 (ENSPEMG00000011863) #17 Slc7a1 (ENSPEMG00000006808) #18 Ubl3 (ENSPEMG00000010779) #19 Katnal1 (ENSPEMG00000009164) #20 ENSPEMG00000000834 #21 Uspl1 (ENSPEMG00000003660) #22 Alox5ap (ENSPEMG00000000576) #23 Medag (ENSPEMG00000000331) #24 Tex26 (ENSPEMG00000019024) #25 Wdr95 (ENSPEMG00000016428) #26 Hsph1 (ENSPEMG00000009941) #27 ENSPEMG00000025164 #28 B3glct (ENSPEMG00000015898) #29 Rxfp2 (ENSPEMG00000018554) #30 ENSPEMG00000026224 #31 ENSPEMG00000031372 #32 ENSPEMG00000029204 #33 ENSPEMG00000030363 #34 ENSPEMG00000011222 #35 Zkscan5 (ENSPEMG00000010963) #36 Zkscan14 (ENSPEMG00000011797) #37 Prairie vole MODERN SPECIES 7 Gsx1 (ENSMOCG00000002374) #7 Pdx1 (ENSMOCG00000007886) #8 Cdx2 (ENSMOCG00000010222) #9 Urad (ENSMOCG00000018154) #10 Flt3 (ENSMOCG00000015945) #11 Pan3 (ENSMOCG00000001443) #12 Flt1 (ENSMOCG00000019790) #13 ENSMOCG00000000648 Pomp (ENSMOCG00000006131) #14 Slc46a3 (ENSMOCG00000007090) #15 Mtus2 (ENSMOCG00000013900) #17 Slc7a1 (ENSMOCG00000022298) #18 Ubl3 (ENSMOCG00000012896) #19 Katnal1 (ENSMOCG00000013914) #20 ENSMOCG00000018161 ##21 ENSMOCG00000018612 #22 Alox5ap (ENSMOCG00000018258) #23 Medag (ENSMOCG00000012447) #24 Tex26 (ENSMOCG00000013830) #25 Wdr95 (ENSMOCG00000021942) #26 Hsph1 (ENSMOCG00000019013) #27 B3glct (ENSMOCG00000004134) #29 ENSMOCG00000012266 Rxfp2 (ENSMOCG00000018232) #30 Fry (ENSMOCG00000014119) Etv5 (ENSMOCG00000013798) Dgkg (ENSMOCG00000007347) Crygs (ENSMOCG00000017069) Tbccd1 (ENSMOCG00000016431) Dnajb11 (ENSMOCG00000014479) Ahsg (ENSMOCG00000016842) Cricetinae ANCESTRAL SPECIES 19 ENSGT00940000158381 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 ENSGT00950000183061.a.a.b.ib Golden Hamster MODERN SPECIES 762 Polr1d (ENSMAUG00000001946) Pdx1 (ENSMAUG00000021082) #8 Cdx2 (ENSMAUG00000020822) #9 Urad (ENSMAUG00000019946) #10 ENSMAUG00000001106 Flt3 (ENSMAUG00000011952) #11 Pan3 (ENSMAUG00000021155) #12 Flt1 (ENSMAUG00000006859) #13 Pomp (ENSMAUG00000006509) #14 ENSMAUG00000020285 ENSMAUG00000018323 #17 Slc7a1 (ENSMAUG00000000359) #18 Ubl3 (ENSMAUG00000016399) #19 Katnal1 (ENSMAUG00000007731) #20 ENSMAUG00000017646 ENSMAUG00000013736 #22 Alox5ap (ENSMAUG00000012262) #23 Medag (ENSMAUG00000009604) #24 Tex26 (ENSMAUG00000016345) #25 Wdr95 (ENSMAUG00000014604) #26 Hsph1 (ENSMAUG00000002443) #27 B3glct (ENSMAUG00000018787) #29 Rxfp2 (ENSMAUG00000017558) #30 ENSMAUG00000008801 ENSMAUG00000013210 ENSMAUG00000012032 ENSMAUG00000010577 ENSMAUG00000019853 N4bp2l1 (ENSMAUG00000017134) N4bp2l2 (ENSMAUG00000011937) Pds5b (ENSMAUG00000000343) Chinese hamster chok1gshd MODERN SPECIES 130 Gsx1 (ENSCGRG00001017641) #7 Pdx1 (ENSCGRG00001024891) #8 Cdx2 (ENSCGRG00001024259) #9 Urad (ENSCGRG00001021146) #10 Flt3 (ENSCGRG00001010328) #11 ENSCGRG00001012489 Pan3 (ENSCGRG00001024986) #12 Flt1 (ENSCGRG00001000764) #13 Pomp (ENSCGRG00001000803) #14 Slc46a3 (ENSCGRG00001023870) #15 ENSCGRG00001001206 Mtus2 (ENSCGRG00001023648) #17 Slc7a1 (ENSCGRG00001019393) #18 Ubl3 (ENSCGRG00001002093) #19 Katnal1 (ENSCGRG00001024027) #20 ENSCGRG00001018342 #22 Alox5ap (ENSCGRG00001018470) #23 ENSCGRG00001025063 Medag (ENSCGRG00001024417) #24 Tex26 (ENSCGRG00001015836) #25 Wdr95 (ENSCGRG00001015579) #26 Hsph1 (ENSCGRG00001021270) #27 B3glct (ENSCGRG00001024270) #29 Rxfp2 (ENSCGRG00001014494) #30 Fry (ENSCGRG00001011470) Zar1l (ENSCGRG00001012256) Brca2 (ENSCGRG00001017867) N4bp2l1 (ENSCGRG00001015340) N4bp2l2 (ENSCGRG00001023249) Pds5b (ENSCGRG00001010829) Kl (ENSCGRG00001023796) Murinae ANCESTRAL SPECIES 28 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00960000191336 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Mus ANCESTRAL SPECIES 17 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00960000191336 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Mus_A ANCESTRAL SPECIES 6 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00960000191336 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Mus_B ANCESTRAL SPECIES 4 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.a.n ##21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00960000191336 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Mus_C ANCESTRAL SPECIES 4 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.a.n ##21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00960000191336 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Steppe mouse MODERN SPECIES 3364 Pdx1 (ENSMSIG00000023956) #8 Cdx2 (ENSMSIG00000023947) #9 ENSMSIG00000023941 ENSMSIG00000023930 Flt3 (ENSMSIG00000023851) #11 Pan3 (ENSMSIG00000023687) #12 Flt1 (ENSMSIG00000023642) #13 ENSMSIG00000023628 Pomp (ENSMSIG00000023598) #14 Slc46a3 (ENSMSIG00000023578) #15 Mtus2 (ENSMSIG00000023484) #17 Slc7a1 (ENSMSIG00000023421) #18 Ubl3 (ENSMSIG00000023402) #19 Katnal1 (ENSMSIG00000023377) #20 ENSMSIG00000023332 ##21 Uspl1 (ENSMSIG00000023285) #22 Alox5ap (ENSMSIG00000023243) #23 ENSMSIG00000023226 Medag (ENSMSIG00000023188) #24 Tex26 (ENSMSIG00000023128) #25 Wdr95 (ENSMSIG00000023065) #26 Hsph1 (ENSMSIG00000022895) #27 ENSMSIG00000022866 B3glct (ENSMSIG00000022847) #29 Rxfp2 (ENSMSIG00000022574) #30 Fry (ENSMSIG00000022362) Zar1l (ENSMSIG00000022351) Brca2 (ENSMSIG00000022300) ENSMSIG00000022281 ENSMSIG00000022244 ENSMSIG00000022219 spretus MODERN SPECIES 14 Gsx1 (MGP_SPRETEiJ_G0029033) #7 Pdx1 (MGP_SPRETEiJ_G0029034) #8 Cdx2 (MGP_SPRETEiJ_G0029035) #9 Urad (MGP_SPRETEiJ_G0029036) #10 Flt3 (MGP_SPRETEiJ_G0029037) #11 Pan3 (MGP_SPRETEiJ_G0029038) #12 Flt1 (MGP_SPRETEiJ_G0029039) #13 Pomp (MGP_SPRETEiJ_G0029040) #14 Slc46a3 (MGP_SPRETEiJ_G0029041) #15 Mtus2 (MGP_SPRETEiJ_G0029042) #17 Slc7a1 (MGP_SPRETEiJ_G0029043) #18 Ubl3 (MGP_SPRETEiJ_G0029044) #19 MGP_SPRETEiJ_G0029045 #20 MGP_SPRETEiJ_G0029046 #20 MGP_SPRETEiJ_G0029047 #21 Uspl1 (MGP_SPRETEiJ_G0029048) #22 Alox5ap (MGP_SPRETEiJ_G0029049) #23 Medag (MGP_SPRETEiJ_G0029050) #24 Tex26 (MGP_SPRETEiJ_G0029051) #25 Wdr95 (MGP_SPRETEiJ_G0029052) #26 Hsph1 (MGP_SPRETEiJ_G0029053) #27 B3glct (MGP_SPRETEiJ_G0029054) #29 Rxfp2 (MGP_SPRETEiJ_G0029055) #30 Fry (MGP_SPRETEiJ_G0029056) Zar1l (MGP_SPRETEiJ_G0029057) Brca2 (MGP_SPRETEiJ_G0029058) N4bp2l1 (MGP_SPRETEiJ_G0029059) N4bp2l2 (MGP_SPRETEiJ_G0029060) Pds5b (MGP_SPRETEiJ_G0029061) Kl (MGP_SPRETEiJ_G0029062) Stard13 (MGP_SPRETEiJ_G0029063) Mouse MODERN SPECIES 14 Polr1d (ENSMUSG00000029642) Gsx1 (ENSMUSG00000053129) #7 Pdx1 (ENSMUSG00000029644) #8 Cdx2 (ENSMUSG00000029646) #9 Urad (ENSMUSG00000075543) #10 Flt3 (ENSMUSG00000042817) #11 Pan3 (ENSMUSG00000029647) #12 Flt1 (ENSMUSG00000029648) #13 Pomp (ENSMUSG00000029649) #14 Slc46a3 (ENSMUSG00000029650) #15 Mtus2 (ENSMUSG00000029651) #17 Slc7a1 (ENSMUSG00000041313) #18 Ubl3 (ENSMUSG00000001687) #19 Katnal1 (ENSMUSG00000041298) #20 Hmgb1 (ENSMUSG00000066551) ##21 Uspl1 (ENSMUSG00000041264) #22 Alox5ap (ENSMUSG00000060063) #23 Medag (ENSMUSG00000029659) #24 Tex26 (ENSMUSG00000029660) #25 Wdr95 (ENSMUSG00000029658) #26 Hsph1 (ENSMUSG00000029657) #27 B3glct (ENSMUSG00000051950) #29 Rxfp2 (ENSMUSG00000053368) #30 Fry (ENSMUSG00000056602) Zar1l (ENSMUSG00000056586) Brca2 (ENSMUSG00000041147) N4bp2l1 (ENSMUSG00000041132) N4bp2l2 (ENSMUSG00000029655) Pds5b (ENSMUSG00000034021) Kl (ENSMUSG00000058488) Stard13 (ENSMUSG00000016128) Ryukyu mouse MODERN SPECIES 14 Gsx1 (MGP_CAROLIEiJ_G0028035) #7 Pdx1 (MGP_CAROLIEiJ_G0028036) #8 Cdx2 (MGP_CAROLIEiJ_G0028037) #9 Urad (MGP_CAROLIEiJ_G0028038) #10 Flt3 (MGP_CAROLIEiJ_G0028039) #11 Pan3 (MGP_CAROLIEiJ_G0028040) #12 Flt1 (MGP_CAROLIEiJ_G0028041) #13 Pomp (MGP_CAROLIEiJ_G0028042) #14 Slc46a3 (MGP_CAROLIEiJ_G0028043) #15 Mtus2 (MGP_CAROLIEiJ_G0028044) #17 Slc7a1 (MGP_CAROLIEiJ_G0028045) #18 Ubl3 (MGP_CAROLIEiJ_G0028046) #19 MGP_CAROLIEiJ_G0028047 #20 MGP_CAROLIEiJ_G0028048 #20 MGP_CAROLIEiJ_G0028049 #21 Uspl1 (MGP_CAROLIEiJ_G0028050) #22 MGP_CAROLIEiJ_G0028051 #23 Medag (MGP_CAROLIEiJ_G0028052) #24 Tex26 (MGP_CAROLIEiJ_G0028053) #25 Wdr95 (MGP_CAROLIEiJ_G0028054) #26 Hsph1 (MGP_CAROLIEiJ_G0028055) #27 B3glct (MGP_CAROLIEiJ_G0028056) #29 Rxfp2 (MGP_CAROLIEiJ_G0028057) #30 MGP_CAROLIEiJ_G0028058 Zar1l (MGP_CAROLIEiJ_G0028059) Brca2 (MGP_CAROLIEiJ_G0028060) N4bp2l1 (MGP_CAROLIEiJ_G0028061) N4bp2l2 (MGP_CAROLIEiJ_G0028062) Pds5b (MGP_CAROLIEiJ_G0028063) Kl (MGP_CAROLIEiJ_G0028064) Stard13 (MGP_CAROLIEiJ_G0028065) Shrew mouse MODERN SPECIES 15 Gsx1 (MGP_PahariEiJ_G0024601) #7 Pdx1 (MGP_PahariEiJ_G0024602) #8 Cdx2 (MGP_PahariEiJ_G0024603) #9 Urad (MGP_PahariEiJ_G0024604) #10 Flt3 (MGP_PahariEiJ_G0024605) #11 Pan3 (MGP_PahariEiJ_G0024606) #12 Flt1 (MGP_PahariEiJ_G0024607) #13 MGP_PahariEiJ_G0024608 Slc46a3 (MGP_PahariEiJ_G0024609) #15 Mtus2 (MGP_PahariEiJ_G0024610) #17 Slc7a1 (MGP_PahariEiJ_G0024611) #18 Ubl3 (MGP_PahariEiJ_G0024612) #19 MGP_PahariEiJ_G0024613 #20 MGP_PahariEiJ_G0024614 #20 MGP_PahariEiJ_G0024615 #21 Uspl1 (MGP_PahariEiJ_G0024616) #22 Alox5ap (MGP_PahariEiJ_G0024617) #23 Medag (MGP_PahariEiJ_G0024618) #24 Tex26 (MGP_PahariEiJ_G0024619) #25 MGP_PahariEiJ_G0024620 #26 Hsph1 (MGP_PahariEiJ_G0024621) #27 B3glct (MGP_PahariEiJ_G0024622) #29 Rxfp2 (MGP_PahariEiJ_G0024623) #30 Fry (MGP_PahariEiJ_G0024624) Zar1l (MGP_PahariEiJ_G0024625) MGP_PahariEiJ_G0024626 N4bp2l1 (MGP_PahariEiJ_G0024627) N4bp2l2 (MGP_PahariEiJ_G0024628) Pds5b (MGP_PahariEiJ_G0024629) Kl (MGP_PahariEiJ_G0024630) Stard13 (MGP_PahariEiJ_G0024631) Rat MODERN SPECIES 3 Polr1d (ENSRNOG00000000954) Gsx1 (ENSRNOG00000000952) #7 Pdx1 (ENSRNOG00000046458) #8 Cdx2 (ENSRNOG00000032759) #9 Urad (ENSRNOG00000050360) #10 Flt3 (ENSRNOG00000054764) #11 Pan3 (ENSRNOG00000000942) #12 Flt1 (ENSRNOG00000000940) #13 Pomp (ENSRNOG00000049229) ##14 Slc46a3 (ENSRNOG00000000937) #15 Mtus2 (ENSRNOG00000032410) #17 Slc7a1 (ENSRNOG00000000924) #18 Katnal1 (ENSRNOG00000047618) #20 Rpl35a-ps6 (ENSRNOG00000069961) AABR07035218.1 (ENSRNOG00000029813) ##21 Uspl1 (ENSRNOG00000000909) #22 Alox5ap (ENSRNOG00000000907) #23 AABR07035203.1 (ENSRNOG00000060198) Medag (ENSRNOG00000000906) #24 Tex26 (ENSRNOG00000000905) #25 Wdr95 (ENSRNOG00000000904) #26 Hsph1 (ENSRNOG00000000902) #27 B3glct (ENSRNOG00000061346) #29 Rxfp2 (ENSRNOG00000000897) #30 Fry (ENSRNOG00000000894) LOC102548389 (ENSRNOG00000000891) LOC304239 (ENSRNOG00000000889) ENSRNOG00000064620 ENSRNOG00000066373 ENSRNOG00000069155 ENSRNOG00000063908 Upper Galilee mountains blind mole rat MODERN SPECIES 1878 ENSNGAG00000011527 Pdx1 (ENSNGAG00000024275) #8 Cdx2 (ENSNGAG00000019299) #9 Flt3 (ENSNGAG00000022203) #11 Pan3 (ENSNGAG00000005671) #12 Flt1 (ENSNGAG00000022615) #13 ENSNGAG00000019389 #14 Slc46a3 (ENSNGAG00000023221) #15 ENSNGAG00000022087 ENSNGAG00000011243 ##17 ENSNGAG00000023043 #17 Slc7a1 (ENSNGAG00000011095) #18 Ubl3 (ENSNGAG00000021531) #19 Katnal1 (ENSNGAG00000018344) #20 ENSNGAG00000020735 ##21 Uspl1 (ENSNGAG00000021450) #22 Alox5ap (ENSNGAG00000010455) #23 Medag (ENSNGAG00000021713) #24 Tex26 (ENSNGAG00000016306) #25 ENSNGAG00000021744 Wdr95 (ENSNGAG00000008428) #26 ENSNGAG00000014918 #27 B3glct (ENSNGAG00000021468) #29 Rxfp2 (ENSNGAG00000024348) #30 Fry (ENSNGAG00000020982) Zar1l (ENSNGAG00000012663) Brca2 (ENSNGAG00000023032) ENSNGAG00000024018 ENSNGAG00000023894 Pds5b (ENSNGAG00000021582) Kl (ENSNGAG00000013711) Lesser Egyptian jerboa MODERN SPECIES 73 ENSJJAG00000009076 Gsx1 (ENSJJAG00000021574) #7 Pdx1 (ENSJJAG00000017468) #8 Cdx2 (ENSJJAG00000010229) #9 Urad (ENSJJAG00000022682) #10 Flt3 (ENSJJAG00000004796) #11 Pan3 (ENSJJAG00000013560) #12 Flt1 (ENSJJAG00000009276) #13 Pomp (ENSJJAG00000014017) #14 Slc46a3 (ENSJJAG00000015117) #15 ENSJJAG00000008307 #17 Slc7a1 (ENSJJAG00000022034) #18 Ubl3 (ENSJJAG00000016514) #19 Katnal1 (ENSJJAG00000011429) #20 ENSJJAG00000000696 #21 ENSJJAG00000014544 #22 Alox5ap (ENSJJAG00000004614) #23 Medag (ENSJJAG00000017396) #24 Tex26 (ENSJJAG00000007098) #25 Wdr95 (ENSJJAG00000015306) #26 Hsph1 (ENSJJAG00000000436) #27 B3glct (ENSJJAG00000022078) #29 Rxfp2 (ENSJJAG00000022592) #30 Fry (ENSJJAG00000021715) Zar1l (ENSJJAG00000023916) ENSJJAG00000024080 N4bp2l1 (ENSJJAG00000022228) ENSJJAG00000007334 Pds5b (ENSJJAG00000023181) Kl (ENSJJAG00000004906) Stard13 (ENSJJAG00000016848) Kangaroo rat MODERN SPECIES 421 Gsx1 (ENSDORG00000029182) #7 Pdx1 (ENSDORG00000008418) #8 Cdx2 (ENSDORG00000005495) #9 Urad (ENSDORG00000025006) #10 Flt3 (ENSDORG00000010727) #11 Pan3 (ENSDORG00000014727) #12 Flt1 (ENSDORG00000014729) #13 Pomp (ENSDORG00000012432) #14 Slc46a3 (ENSDORG00000012433) #15 ENSDORG00000025782 #17 Slc7a1 (ENSDORG00000006086) #18 ENSDORG00000026706 Ubl3 (ENSDORG00000026903) #19 Katnal1 (ENSDORG00000012794) #20 ENSDORG00000027930 #21 Uspl1 (ENSDORG00000007790) #22 Alox5ap (ENSDORG00000006041) #23 Medag (ENSDORG00000008557) #24 ENSDORG00000008558 #25 Wdr95 (ENSDORG00000026485) #26 ENSDORG00000014903 #27 B3glct (ENSDORG00000011835) #29 Rxfp2 (ENSDORG00000013648) #30 Fry (ENSDORG00000007045) Zar1l (ENSDORG00000023723) N4bp2l1 (ENSDORG00000025880) ENSDORG00000023870 Pds5b (ENSDORG00000007529) Kl (ENSDORG00000014867) Stard13 (ENSDORG00000014869) Rodentia_A ANCESTRAL SPECIES 22 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000164144 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.a.n ##21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000165080 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Hystricomorpha ANCESTRAL SPECIES 25 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000164144 ENSGT00940000158713 #13 ENSGT00390000010734.j.p #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.a.n ##21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000157034.gb ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614.f Hystricomorpha_a ANCESTRAL SPECIES 21 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000164144 ENSGT00940000158713 #13 ENSGT00390000010734.j.p #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.a.n ##21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000157034.gb ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614.f Hystricomorpha_b ANCESTRAL SPECIES 48 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000164144 ENSGT00940000158713 #13 ENSGT00390000010734.j.p #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.a.n ##21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000157034.gb ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614.f Long-tailed chinchilla MODERN SPECIES 138 CASP7 (ENSCLAG00000006895) NRAP (ENSCLAG00000004255) HABP2 (ENSCLAG00000005651) TCF7L2 (ENSCLAG00000006910) VTI1A (ENSCLAG00000009927) ZDHHC6 (ENSCLAG00000017305) ACSL5 (ENSCLAG00000005097) ENSCLAG00000003782 TECTB (ENSCLAG00000014020) GPAM (ENSCLAG00000012305) ENSCLAG00000004626 #17 SLC7A1 (ENSCLAG00000004045) #18 UBL3 (ENSCLAG00000003772) #19 KATNAL1 (ENSCLAG00000003501) #20 HMGB1 (ENSCLAG00000003343) ##21 USPL1 (ENSCLAG00000003130) #22 ALOX5AP (ENSCLAG00000005620) #23 MEDAG (ENSCLAG00000005352) #24 TEX26 (ENSCLAG00000005302) #25 ENSCLAG00000004125 #26 HSPH1 (ENSCLAG00000004472) #27 ENSCLAG00000017567 B3GLCT (ENSCLAG00000003709) #29 RXFP2 (ENSCLAG00000005864) #30 FRY (ENSCLAG00000005912) ZAR1L (ENSCLAG00000004947) BRCA2 (ENSCLAG00000005830) N4BP2L1 (ENSCLAG00000004721) ENSCLAG00000004607 PDS5B (ENSCLAG00000003381) KL (ENSCLAG00000004704) Degu MODERN SPECIES 79 ENSODEG00000007620 #10 FLT3 (ENSODEG00000007884) #11 PAN3 (ENSODEG00000005038) #12 ENSODEG00000006016 ENSODEG00000006274 #13 ENSODEG00000005111 #14 ENSODEG00000005569 SLC46A3 (ENSODEG00000006238) #15 ENSODEG00000006635 ENSODEG00000005871 #17 SLC7A1 (ENSODEG00000005306) #18 ENSODEG00000005438 UBL3 (ENSODEG00000005571) #19 KATNAL1 (ENSODEG00000005926) #20 ENSODEG00000006120 ##21 USPL1 (ENSODEG00000007176) #22 ALOX5AP (ENSODEG00000005645) #23 MEDAG (ENSODEG00000005967) #24 ENSODEG00000006248 #26 HSPH1 (ENSODEG00000005577) #27 ENSODEG00000019264 B3GLCT (ENSODEG00000005559) #29 RXFP2 (ENSODEG00000008146) #30 FRY (ENSODEG00000006572) ZAR1L (ENSODEG00000005981) ENSODEG00000007088 ENSODEG00000009214 ENSODEG00000005727 N4BP2L2 (ENSODEG00000006521) ENSODEG00000006412 PDS5B (ENSODEG00000006819) Guinea pig MODERN SPECIES 6 LNX2 (ENSCPOG00000010152) ENSCPOG00000033461 ENSCPOG00000026854 PDX1 (ENSCPOG00000024534) #8 CDX2 (ENSCPOG00000007276) #9 FLT3 (ENSCPOG00000007285) #11 PAN3 (ENSCPOG00000013349) #12 FLT1 (ENSCPOG00000013357) #13 POMP (ENSCPOG00000001710) #14 SLC46A3 (ENSCPOG00000015460) #15 ENSCPOG00000005581 #17 SLC7A1 (ENSCPOG00000005590) #18 UBL3 (ENSCPOG00000036242) #19 KATNAL1 (ENSCPOG00000000804) #20 HMGB1 (ENSCPOG00000031835) ##21 USPL1 (ENSCPOG00000009937) #22 ALOX5AP (ENSCPOG00000032690) #23 MEDAG (ENSCPOG00000003921) #24 ENSCPOG00000007441 #27 ENSCPOG00000035490 B3GLCT (ENSCPOG00000007455) #29 RXFP2 (ENSCPOG00000009157) #30 FRY (ENSCPOG00000003917) BRCA2 (ENSCPOG00000005153) N4BP2L1 (ENSCPOG00000003366) ENSCPOG00000038887 PDS5B (ENSCPOG00000033286) KL (ENSCPOG00000002058) STARD13 (ENSCPOG00000005976) RFC3 (ENSCPOG00000008739) NBEA (ENSCPOG00000004513) Naked mole-rat female MODERN SPECIES 2 CDX2 (ENSHGLG00000009166) #9 URAD (ENSHGLG00000008479) FLT3 (ENSHGLG00000005717) #11 PAN3 (ENSHGLG00000018782) #12 FLT1 (ENSHGLG00000003643) #13 ENSHGLG00000008991 #14 SLC46A3 (ENSHGLG00000007999) #15 ENSHGLG00000039882 ##14 ENSHGLG00000012383 ENSHGLG00000013589 #17 ENSHGLG00000019220 #18 ENSHGLG00000033244 UBL3 (ENSHGLG00000040587) #19 KATNAL1 (ENSHGLG00000003538) #20 ENSHGLG00000003352 ##21 USPL1 (ENSHGLG00000036213) #22 ALOX5AP (ENSHGLG00000013689) #23 MEDAG (ENSHGLG00000037818) #24 TEX26 (ENSHGLG00000018916) #25 HSPH1 (ENSHGLG00000006908) #27 ENSHGLG00000039932 ENSHGLG00000013471 #29 ENSHGLG00000047678 ENSHGLG00000018220 ENSHGLG00000006352 ENSHGLG00000002160 ENSHGLG00000009276 #30 ENSHGLG00000036768 ENSHGLG00000009415 ENSHGLG00000041019 ZAR1L (ENSHGLG00000006253) Sciuridae ANCESTRAL SPECIES 34 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.a.n ##21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000165080 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Marmotini ANCESTRAL SPECIES 29 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #21 ENSGT00950000183120.e.b.a.a.b.b.b.b ##21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000165080 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Marmotini_b ANCESTRAL SPECIES 39 ENSGT00550000075160 ENSGT00940000154361.A #7 ENSGT00940000162542 #8 ENSGT00940000161261 #9 ENSGT00390000002395 #10 ENSGT00940000160575 #11 ENSGT00390000001504 #12 ENSGT00940000158713 #13 ENSGT00390000010734.j #14 ENSGT00950000183096.a.a.c.b #15 ENSGT00950000183026.B #17 ENSGT00940000155349 #18 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.b.b.a.b.b.q #21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000162967 #26 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000165080 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 Arctic ground squirrel MODERN SPECIES 58 GSX1 (ENSUPAG00010018112) #7 PDX1 (ENSUPAG00010018122) #8 CDX2 (ENSUPAG00010018125) #9 ENSUPAG00010018133 #10 FLT3 (ENSUPAG00010018139) #11 PAN3 (ENSUPAG00010000039) #12 FLT1 (ENSUPAG00010000212) #13 POMP (ENSUPAG00010000279) #14 SLC46A3 (ENSUPAG00010000307) #15 ENSUPAG00010000323 ENSUPAG00010000338 #17 SLC7A1 (ENSUPAG00010000429) #18 UBL3 (ENSUPAG00010000449) #19 KATNAL1 (ENSUPAG00010000483) #20 ENSUPAG00010000514 ##21 USPL1 (ENSUPAG00010000537) #22 ALOX5AP (ENSUPAG00010000582) #23 MEDAG (ENSUPAG00010000596) #24 TEX26 (ENSUPAG00010000608) #25 ENSUPAG00010000650 #26 HSPH1 (ENSUPAG00010000704) #27 B3GLCT (ENSUPAG00010001058) #29 Squirrel MODERN SPECIES 72 POLR1D (ENSSTOG00000013877) GSX1 (ENSSTOG00000029234) #7 PDX1 (ENSSTOG00000028173) #8 ENSSTOG00000002918 #9 ENSSTOG00000028014 #10 FLT3 (ENSSTOG00000002925) #11 PAN3 (ENSSTOG00000009453) #12 FLT1 (ENSSTOG00000021178) #13 POMP (ENSSTOG00000013687) #14 SLC46A3 (ENSSTOG00000013694) #15 ENSSTOG00000022794 #17 SLC7A1 (ENSSTOG00000012771) #18 UBL3 (ENSSTOG00000012777) #19 KATNAL1 (ENSSTOG00000008802) #20 ENSSTOG00000000443 #21 USPL1 (ENSSTOG00000028023) #22 ALOX5AP (ENSSTOG00000010915) #23 MEDAG (ENSSTOG00000003534) #24 ENSSTOG00000020892 #26 HSPH1 (ENSSTOG00000001700) #27 B3GLCT (ENSSTOG00000001710) #29 RXFP2 (ENSSTOG00000010636) #30 FRY (ENSSTOG00000013718) ZAR1L (ENSSTOG00000005506) ENSSTOG00000005517 N4BP2L1 (ENSSTOG00000005584) ENSSTOG00000030222 PDS5B (ENSSTOG00000001429) KL (ENSSTOG00000024168) STARD13 (ENSSTOG00000006622) RFC3 (ENSSTOG00000000378) Alpin marmot MODERN SPECIES 13 LNX2 (ENSMMMG00000021459) POLR1D (ENSMMMG00000021469) GSX1 (ENSMMMG00000021480) #7 CDX2 (ENSMMMG00000021482) #9 ENSMMMG00000021485 #10 FLT3 (ENSMMMG00000021498) #11 PAN3 (ENSMMMG00000021592) #12 FLT1 (ENSMMMG00000021722) #13 POMP (ENSMMMG00000021745) #14 SLC46A3 (ENSMMMG00000021759) #15 ENSMMMG00000021777 #17 SLC7A1 (ENSMMMG00000021811) #18 UBL3 (ENSMMMG00000021836) #19 KATNAL1 (ENSMMMG00000021861) #20 ENSMMMG00000021875 ##21 ENSMMMG00000021912 #22 ALOX5AP (ENSMMMG00000021924) #23 MEDAG (ENSMMMG00000021928) #24 TEX26 (ENSMMMG00000021931) #25 ENSMMMG00000021936 #26 HSPH1 (ENSMMMG00000021945) #27 B3GLCT (ENSMMMG00000022023) #29 RXFP2 (ENSMMMG00000022035) #30 FRY (ENSMMMG00000022076) ZAR1L (ENSMMMG00000022098) BRCA2 (ENSMMMG00000022103) N4BP2L1 (ENSMMMG00000022139) ENSMMMG00000022143 N4BP2L2 (ENSMMMG00000022165) ENSMMMG00000022166 ENSMMMG00000022169 Eurasian red squirrel MODERN SPECIES 13 POLR1D (ENSSVLG00005023318) GSX1 (ENSSVLG00005023295) #7 PDX1 (ENSSVLG00005023276) #8 CDX2 (ENSSVLG00005023249) #9 URAD (ENSSVLG00005023233) FLT3 (ENSSVLG00005023095) #11 PAN3 (ENSSVLG00005022998) #12 FLT1 (ENSSVLG00005022893) #13 POMP (ENSSVLG00005022839) #14 SLC46A3 (ENSSVLG00005022784) #15 MTUS2 (ENSSVLG00005022484) #17 SLC7A1 (ENSSVLG00005022416) #18 UBL3 (ENSSVLG00005022374) #19 KATNAL1 (ENSSVLG00005022343) #20 ENSSVLG00005022302 ##21 USPL1 (ENSSVLG00005022232) #22 ALOX5AP (ENSSVLG00005022177) #23 MEDAG (ENSSVLG00005022152) #24 TEX26 (ENSSVLG00005022083) #25 ENSSVLG00005021904 #26 HSPH1 (ENSSVLG00005021367) #27 B3GLCT (ENSSVLG00005021156) #29 RXFP2 (ENSSVLG00005020815) #30 ENSSVLG00005020793 FRY (ENSSVLG00005019945) ZAR1L (ENSSVLG00005019599) BRCA2 (ENSSVLG00005015076) N4BP2L1 (ENSSVLG00005013256) ENSSVLG00005013108 PDS5B (ENSSVLG00005012920) ENSSVLG00005012874 Lagomorpha ANCESTRAL SPECIES 111 ENSGT00390000004952.b #19 ENSGT00940000156630 #20 ENSGT00950000183120.e.b.a.a.a.n ##21 ENSGT00390000002316 #22 ENSGT00940000158706 #23 ENSGT00390000018451 #24 ENSGT00390000009484 #25 ENSGT00940000159635 #27 ENSGT00940000155499 #29 ENSGT00940000158948.b #30 ENSGT00610000086058.b ENSGT00390000012305.b ENSGT00390000003602 ENSGT00940000161564 ENSGT00940000165080 ENSGT00940000161440 ENSGT00940000157257 ENSGT00940000157614 ENSGT00950000183061.a.a.b Rabbit MODERN SPECIES 435 UBL3 (ENSOCUG00000001957) #19 RPL39 (ENSOCUG00000025695) KATNAL1 (ENSOCUG00000003387) #20 HMGB1 (ENSOCUG00000021335) ##21 USPL1 (ENSOCUG00000011144) #22 ALOX5AP (ENSOCUG00000008200) #23 MEDAG (ENSOCUG00000016718) #24 TEX26 (ENSOCUG00000016724) #25 HSPH1 (ENSOCUG00000014773) #27 B3GLCT (ENSOCUG00000014798) #29 ENSOCUG00000004157 ENSOCUG00000037463 ENSOCUG00000031587 ENSOCUG00000028125 RXFP2 (ENSOCUG00000000751) #30 FRY (ENSOCUG00000015570) ENSOCUG00000037309 ZAR1L (ENSOCUG00000026484) BRCA2 (ENSOCUG00000016878) ENSOCUG00000008952 Pika MODERN SPECIES 4284 HMGB1 (ENSOPRG00000003507) ##21 USPL1 (ENSOPRG00000003532) #22 Tree shrew MODERN SPECIES 7900 USPL1 (ENSTBEG00000011348) #22