Amniota ANCESTRAL SPECIES ENSGT01030000234626.E ENSGT00940000156648 ENSGT00940000159933 ENSGT00390000015655.a ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000156340.b ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 Mammalia ANCESTRAL SPECIES 73 ENSGT00940000156648 ENSGT00940000159933 ENSGT00390000015655.a ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000162428 #15 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000156340.b ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a Theria ANCESTRAL SPECIES 15 ENSGT00940000159933 ENSGT00390000015655.a ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000162555 #18 ENSGT00940000162428.b #15 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000166491 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000156340.b ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 Eutheria ANCESTRAL SPECIES 3 ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Boreoeutheria ANCESTRAL SPECIES 1 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000162428.b #15 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.j #33 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 Eulipotyphla ANCESTRAL SPECIES 2205 ENSGT00940000154620 #21 ENSGT00940000156155 #22 Common shrew MODERN SPECIES 2637 ENSSARG00000003282 #21 ENSSARG00000003244 #21 DCUN1D5 (ENSSARG00000003213) #22 Hedgehog MODERN SPECIES 3500 ENSEEUG00000011858 #22 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT01030000234886 ENSGT00940000162428.b #15 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000162428.b #15 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Carnivora ANCESTRAL SPECIES 21 ENSGT01090000260451 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Felidae ANCESTRAL SPECIES ENSGT01090000260451 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000015352.o.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Panthera ANCESTRAL SPECIES 26 ENSGT01090000260451 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000015352.o.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Tiger MODERN SPECIES 74 AASDHPPT (ENSPTIG00000019943) #11 KBTBD3 (ENSPTIG00000019990) #12 MSANTD4 (ENSPTIG00000020029) #13 GRIA4 (ENSPTIG00000000010) #14 ENSPTIG00000003345 #17 ENSPTIG00000005234 #18 PDGFD (ENSPTIG00000005484) #20 DYNC2H1 (ENSPTIG00000005732) #21 DCUN1D5 (ENSPTIG00000007744) #22 MMP13 (ENSPTIG00000008043) #23 MMP12 (ENSPTIG00000008238) #24 MMP3 (ENSPTIG00000008284) #25 MMP1 (ENSPTIG00000008353) #26 MMP10 (ENSPTIG00000008445) #27 MMP8 (ENSPTIG00000008615) #28 MMP27 (ENSPTIG00000008671) #29 MMP20 (ENSPTIG00000008810) #30 MMP7 (ENSPTIG00000008931) #31 ENSPTIG00000008991 #32 BIRC2 (ENSPTIG00000009197) #35 BIRC3 (ENSPTIG00000009589) #36 YAP1 (ENSPTIG00000009822) #37 CFAP300 (ENSPTIG00000009894) CEP126 (ENSPTIG00000010011) Panthera_a ANCESTRAL SPECIES 29 ENSGT01090000260451 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000015352.o.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 leopard MODERN SPECIES 155 PDGFD (ENSPPRG00000005408) #20 DYNC2H1 (ENSPPRG00000008878) #21 DCUN1D5 (ENSPPRG00000011374) #22 MMP13 (ENSPPRG00000012080) #23 MMP12 (ENSPPRG00000012183) #24 ENSPPRG00000012357 #25 MMP1 (ENSPPRG00000012447) #26 ENSPPRG00000012489 #25 ENSPPRG00000013409 #26 MMP8 (ENSPPRG00000013466) #28 MMP27 (ENSPPRG00000013916) #29 MMP20 (ENSPPRG00000014290) #30 MMP7 (ENSPPRG00000014613) #31 ENSPPRG00000015061 #32 BIRC2 (ENSPPRG00000015656) #35 BIRC3 (ENSPPRG00000017639) #36 YAP1 (ENSPPRG00000017793) #37 CFAP300 (ENSPPRG00000019378) lion MODERN SPECIES 10 ENSPLOG00000021511 ELMOD1 (ENSPLOG00000021429) ALKBH8 (ENSPLOG00000021289) #8 CWF19L2 (ENSPLOG00000021204) #9 ENSPLOG00000021113 GUCY1A2 (ENSPLOG00000021082) #10 AASDHPPT (ENSPLOG00000021049) #11 KBTBD3 (ENSPLOG00000021027) #12 MSANTD4 (ENSPLOG00000021006) #13 GRIA4 (ENSPLOG00000020766) #14 ENSPLOG00000020689 #17 ENSPLOG00000020643 #18 DDI1 (ENSPLOG00000020565) #19 PDGFD (ENSPLOG00000020532) #20 DYNC2H1 (ENSPLOG00000019300) #21 ENSPLOG00000019032 #22 MMP13 (ENSPLOG00000018961) #23 MMP12 (ENSPLOG00000018889) #24 MMP3 (ENSPLOG00000018808) #25 MMP1 (ENSPLOG00000018733) #26 ENSPLOG00000018488 #26 MMP8 (ENSPLOG00000018450) #28 MMP27 (ENSPLOG00000018359) #29 MMP20 (ENSPLOG00000018280) #30 MMP7 (ENSPLOG00000018223) #31 TMEM123 (ENSPLOG00000018213) #32 BIRC2 (ENSPLOG00000018052) #35 BIRC3 (ENSPLOG00000018022) #36 YAP1 (ENSPLOG00000017584) #37 CEP126 (ENSPLOG00000017379) ANGPTL5 (ENSPLOG00000017311) Cat MODERN SPECIES 241 CWF19L2 (ENSFCAG00000045471) #9 ENSFCAG00000034545 GUCY1A2 (ENSFCAG00000038721) #10 ENSFCAG00000042411 ENSFCAG00000033787 AASDHPPT (ENSFCAG00000031934) #11 KBTBD3 (ENSFCAG00000015606) #12 MSANTD4 (ENSFCAG00000042108) #13 GRIA4 (ENSFCAG00000015605) #14 ENSFCAG00000037829 CASP4 (ENSFCAG00000005921) #17 CASP12 (ENSFCAG00000005920) #18 DDI1 (ENSFCAG00000043639) #19 PDGFD (ENSFCAG00000024385) #20 DYNC2H1 (ENSFCAG00000028573) #21 DCUN1D5 (ENSFCAG00000037795) #22 ENSFCAG00000049048 MMP13 (ENSFCAG00000000118) #23 MMP12 (ENSFCAG00000010982) #24 MMP3 (ENSFCAG00000015792) #25 MMP1 (ENSFCAG00000015791) #26 MMP10 (ENSFCAG00000015796) #27 ENSFCAG00000047451 #26 MMP8 (ENSFCAG00000015790) #28 MMP27 (ENSFCAG00000015789) #29 MMP20 (ENSFCAG00000015788) #30 MMP7 (ENSFCAG00000015787) #31 TMEM123 (ENSFCAG00000041930) #32 BIRC3 (ENSFCAG00000041774) #36 YAP1 (ENSFCAG00000035050) #37 CFAP300 (ENSFCAG00000009403) Caniformia ANCESTRAL SPECIES 17 ENSGT01100000264760 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 Caniformia_b ANCESTRAL SPECIES 3 ENSGT01100000264760 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759.e.b #25 ENSGT00940000154907.b #26 ENSGT00940000159759.e.a #25 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Mustelinae ANCESTRAL SPECIES 111 ENSGT01100000264760 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759.e.b #25 ENSGT00940000154907.b #26 ENSGT00940000159759.e.a #25 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 American mink MODERN SPECIES 178 AASDHPPT (ENSNVIG00000022596) #11 KBTBD3 (ENSNVIG00000022585) #12 MSANTD4 (ENSNVIG00000022573) #13 GRIA4 (ENSNVIG00000022497) #14 ENSNVIG00000022469 #16 ENSNVIG00000022460 #17 CASP12 (ENSNVIG00000022452) #18 DDI1 (ENSNVIG00000022449) #19 PDGFD (ENSNVIG00000022429) #20 DYNC2H1 (ENSNVIG00000022015) #21 DCNL5 (ENSNVIG00000021961) #22 MMP13 (ENSNVIG00000021947) #23 MMP12 (ENSNVIG00000021917) #24 ENSNVIG00000021908 #25 MMP1 (ENSNVIG00000021897) #26 ENSNVIG00000021891 #25 ENSNVIG00000021764 #26 MMP8 (ENSNVIG00000021739) #28 MMP27 (ENSNVIG00000021721) #29 MMP20 (ENSNVIG00000021713) #30 ENSNVIG00000021687 ENSNVIG00000021676 #32 BIRC2 (ENSNVIG00000021650) #35 BIRC3 (ENSNVIG00000021612) #36 ENSNVIG00000021606 YAP1 (ENSNVIG00000021587) #37 Ferret MODERN SPECIES 268 ELMOD1 (ENSMPUG00000006069) ALKBH8 (ENSMPUG00000006077) #8 CWF19L2 (ENSMPUG00000006145) #9 GUCY1A2 (ENSMPUG00000006254) #10 ENSMPUG00000006266 AASDHPPT (ENSMPUG00000006273) #11 KBTBD3 (ENSMPUG00000006307) #12 MSANTD4 (ENSMPUG00000006316) #13 GRIA4 (ENSMPUG00000006324) #14 ENSMPUG00000006341 #15 ENSMPUG00000006357 #18 PDGFD (ENSMPUG00000006416) #20 DDI1 (ENSMPUG00000006425) #19 ENSMPUG00000006430 DYNC2H1 (ENSMPUG00000006434) #21 DCUN1D5 (ENSMPUG00000006833) #22 ENSMPUG00000006838 MMP13 (ENSMPUG00000006840) #23 MMP12 (ENSMPUG00000006848) #24 ENSMPUG00000006864 #25 MMP1 (ENSMPUG00000006871) #26 ENSMPUG00000006878 #25 MMP8 (ENSMPUG00000006884) #28 MMP27 (ENSMPUG00000007119) #29 MMP20 (ENSMPUG00000007153) #30 MMP7 (ENSMPUG00000007166) #31 ENSMPUG00000007177 #32 BIRC2 (ENSMPUG00000007189) #35 BIRC3 (ENSMPUG00000007197) #36 YAP1 (ENSMPUG00000007208) #37 CFAP300 (ENSMPUG00000007217) Ursidae ANCESTRAL SPECIES 15 ENSGT00390000015655.a ENSGT01100000264760 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759.e.b #25 ENSGT00940000159759.e.a #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Ursus ANCESTRAL SPECIES 17 ENSGT01030000234626.E ENSGT00940000156648 ENSGT00940000159933 ENSGT00390000015655.a ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT01030000234886 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759.e.b #25 ENSGT00940000159759.e.a #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 American black bear MODERN SPECIES 1374 DCUN1D5 (ENSUAMG00000007500) #22 MMP13 (ENSUAMG00000007483) #23 MMP12 (ENSUAMG00000007482) #24 Polar bear MODERN SPECIES 166 ALKBH8 (ENSUMAG00000008743) #8 CWF19L2 (ENSUMAG00000008758) #9 GUCY1A2 (ENSUMAG00000008864) #10 ENSUMAG00000008866 AASDHPPT (ENSUMAG00000008871) #11 KBTBD3 (ENSUMAG00000008879) #12 MSANTD4 (ENSUMAG00000008883) #13 GRIA4 (ENSUMAG00000008904) #14 ENSUMAG00000009022 #17 ENSUMAG00000009027 #18 PDGFD (ENSUMAG00000009038) #20 DDI1 (ENSUMAG00000009040) #19 ENSUMAG00000009046 #21 ENSUMAG00000009073 #21 ENSUMAG00000009090 #21 DCUN1D5 (ENSUMAG00000009107) #22 MMP13 (ENSUMAG00000009113) #23 MMP12 (ENSUMAG00000009133) #24 ENSUMAG00000009143 #25 MMP1 (ENSUMAG00000009155) #26 ENSUMAG00000009160 #25 ENSUMAG00000009165 #26 MMP8 (ENSUMAG00000009197) #28 MMP27 (ENSUMAG00000009207) #29 MMP20 (ENSUMAG00000009249) #30 MMP7 (ENSUMAG00000009262) #31 ENSUMAG00000009266 #32 BIRC2 (ENSUMAG00000009270) #35 BIRC3 (ENSUMAG00000009275) #36 YAP1 (ENSUMAG00000009288) #37 ENSUMAG00000009319 Giant Panda MODERN SPECIES 18 ENSAMEG00000019353 ELMOD1 (ENSAMEG00000002195) ALKBH8 (ENSAMEG00000002177) #8 CWF19L2 (ENSAMEG00000015500) #9 ENSAMEG00000019460 GUCY1A2 (ENSAMEG00000014522) #10 AASDHPPT (ENSAMEG00000000370) #11 KBTBD3 (ENSAMEG00000000382) #12 ENSAMEG00000000384 #13 ENSAMEG00000000390 #14 ENSAMEG00000000467 #17 ENSAMEG00000000511 #18 DDI1 (ENSAMEG00000019134) #19 PDGFD (ENSAMEG00000013560) #20 DYNC2H1 (ENSAMEG00000010320) #21 DCUN1D5 (ENSAMEG00000010318) #22 MMP13 (ENSAMEG00000010270) #23 MMP12 (ENSAMEG00000010243) #24 ENSAMEG00000010203 #25 MMP1 (ENSAMEG00000010172) #26 ENSAMEG00000010164 #25 ENSAMEG00000028774 #26 MMP8 (ENSAMEG00000010107) #28 MMP27 (ENSAMEG00000010096) #29 MMP20 (ENSAMEG00000010079) #30 MMP7 (ENSAMEG00000010068) #31 TMEM123 (ENSAMEG00000010067) #32 BIRC2 (ENSAMEG00000010031) #35 YAP1 (ENSAMEG00000010001) #37 CFAP300 (ENSAMEG00000009990) CEP126 (ENSAMEG00000009985) Canidae ANCESTRAL SPECIES 27 ENSGT00940000163894 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000017443.g.a.a ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00950000186014 ENSGT00940000155677.b #14 ENSGT00940000162428.b #15 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 Canis_lupus DUPLICATION Canis_lupus ANCESTRAL SPECIES 28 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000017443.g.a.a ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00950000186014 ENSGT00940000155677.b #14 ENSGT00940000162428.b #15 ENSGT00940000162555 #18 ENSGT00950000182967.a.a.a.a.a.b.b.a ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155.a #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 Dingo MODERN SPECIES 214 AASDHPPT (ENSCAFG00020008990) #11 KBTBD3 (ENSCAFG00020008995) #12 MSANTD4 (ENSCAFG00020009005) #13 GRIA4 (ENSCAFG00020009023) #14 ENSCAFG00020009148 ENSCAFG00020009158 #15 CASP12 (ENSCAFG00020009167) #18 ENSCAFG00020009172 ENSCAFG00020009183 PDGFD (ENSCAFG00020009202) #20 DDI1 (ENSCAFG00020009203) #19 ENSCAFG00020009224 #21 ENSCAFG00020009235 #21 ENSCAFG00020009260 #21 VDAC1 (ENSCAFG00020009285) ENSCAFG00020009289 #22 MMP13 (ENSCAFG00020009304) #23 MMP12 (ENSCAFG00020009354) #24 MMP3 (ENSCAFG00020009376) #25 MMP1 (ENSCAFG00020009380) #26 MMP8 (ENSCAFG00020009478) #28 MMP27 (ENSCAFG00020009747) #29 MMP20 (ENSCAFG00020009756) #30 ENSCAFG00020009766 #31 BIRC2 (ENSCAFG00020009773) #35 BIRC3 (ENSCAFG00020009777) #36 YAP1 (ENSCAFG00020009787) #37 CFAP300 (ENSCAFG00020009803) CEP126 (ENSCAFG00020009832) ANGPTL5 (ENSCAFG00020009840) TRPC6 (ENSCAFG00020009864) Dog MODERN SPECIES 33 ENSCAFG00845003965 AASDHPPT (ENSCAFG00845004003) #11 KBTBD3 (ENSCAFG00845004053) #12 MSANTD4 (ENSCAFG00845000215) #13 GRIA4 (ENSCAFG00845000279) #14 ENSCAFG00845000322 CASP4 (ENSCAFG00845000375) #15 CASP12 (ENSCAFG00845000482) #18 ENSCAFG00845000587 ENSCAFG00845000601 PDGFD (ENSCAFG00845000627) #20 DDI1 (ENSCAFG00845000650) #19 ENSCAFG00845000669 #21 ENSCAFG00845000695 #21 ENSCAFG00845000714 DCUN1D5 (ENSCAFG00845000732) #22 MMP13 (ENSCAFG00845000761) #23 MMP12 (ENSCAFG00845000798) #24 MMP3 (ENSCAFG00845000842) #25 MMP1 (ENSCAFG00845000871) #26 MMP8 (ENSCAFG00845000899) #28 MMP27 (ENSCAFG00845000933) #29 MMP20 (ENSCAFG00845000974) #30 MMP7 (ENSCAFG00845000992) #31 TMEM123 (ENSCAFG00845001013) #32 BIRC2 (ENSCAFG00845001046) #35 BIRC3 (ENSCAFG00845001106) #36 YAP1 (ENSCAFG00845001157) #37 CFAP300 (ENSCAFG00845001215) ANGPTL5 (ENSCAFG00845001246) CEP126 (ENSCAFG00845001272) Canis_lupus ANCESTRAL SPECIES ENSGT00940000156155.b #22 Dog MODERN SPECIES 25 PYURF (ENSCAFG00845017065) HERC3 (ENSCAFG00845017244) NAP1L5 (ENSCAFG00845018141) FAM13A (ENSCAFG00845018414) TIGD2 (ENSCAFG00845019271) ENSCAFG00845019296 GPRIN3 (ENSCAFG00845019318) ENSCAFG00845019332 ENSCAFG00845019370 SNCA (ENSCAFG00845019506) MMRN1 (ENSCAFG00845019689) ENSCAFG00845019768 CCSER1 (ENSCAFG00845019822) ENSCAFG00845020051 GRID2 (ENSCAFG00845020151) ENSCAFG00845020406 #22 ATOH1 (ENSCAFG00845020445) SMARCAD1 (ENSCAFG00845020527) HPGDS (ENSCAFG00845020740) PDLIM5 (ENSCAFG00845020888) BMPR1B (ENSCAFG00845021570) UNC5C (ENSCAFG00845022086) STPG2 (ENSCAFG00845022552) ENSCAFG00845023076 TSPAN5 (ENSCAFG00845023493) ENSCAFG00845023741 ENSCAFG00845023892 METAP1 (ENSCAFG00845023991) ADH5 (ENSCAFG00845024094) ADH4 (ENSCAFG00845024170) ENSCAFG00845024272 Dingo MODERN SPECIES 342 HERC3 (ENSCAFG00020004591) ENSCAFG00020004515 ENSCAFG00020004275 ENSCAFG00020004247 TIGD2 (ENSCAFG00020004246) ENSCAFG00020004241 GPRIN3 (ENSCAFG00020004239) ENSCAFG00020004233 ENSCAFG00020004232 SNCA (ENSCAFG00020004229) MMRN1 (ENSCAFG00020004220) ENSCAFG00020004213 CCSER1 (ENSCAFG00020004184) ENSCAFG00020004145 ENSCAFG00020004126 ENSCAFG00020004110 #22 GRID2 (ENSCAFG00020004081) ATOH1 (ENSCAFG00020004043) ENSCAFG00020004014 SMARCAD1 (ENSCAFG00020003994) HPGDS (ENSCAFG00020003987) PDLIM5 (ENSCAFG00020003832) BMPR1B (ENSCAFG00020003792) UNC5C (ENSCAFG00020003669) ENSCAFG00020003659 STPG2 (ENSCAFG00020003633) ENSCAFG00020003412 TSPAN5 (ENSCAFG00020003390) ENSCAFG00020003383 ENSCAFG00020003381 METAP1 (ENSCAFG00020003372) Red fox MODERN SPECIES 61 ENSVVUG00000013969 ENSVVUG00000013968 AASDHPPT (ENSVVUG00000013961) #11 KBTBD3 (ENSVVUG00000013959) #12 MSANTD4 (ENSVVUG00000013957) #13 ENSVVUG00000013955 GRIA4 (ENSVVUG00000013946) #14 ENSVVUG00000013932 ENSVVUG00000013918 #15 CASP12 (ENSVVUG00000013915) #18 ENSVVUG00000013912 ENSVVUG00000013893 DDI1 (ENSVVUG00000013892) #19 PDGFD (ENSVVUG00000013885) #20 DYNC2H1 (ENSVVUG00000012126) #21 ENSVVUG00000012007 #22 MMP13 (ENSVVUG00000011996) #23 MMP12 (ENSVVUG00000011970) #24 MMP3 (ENSVVUG00000011962) #25 MMP1 (ENSVVUG00000011949) #26 MMP8 (ENSVVUG00000010844) #28 MMP27 (ENSVVUG00000010759) #29 MMP20 (ENSVVUG00000010743) #30 MMP7 (ENSVVUG00000010731) #31 ENSVVUG00000010725 ENSVVUG00000010721 #32 BIRC2 (ENSVVUG00000010579) #35 BIRC3 (ENSVVUG00000010573) #36 YAP1 (ENSVVUG00000010559) #37 CFAP300 (ENSVVUG00000010540) CEP126 (ENSVVUG00000010517) Laurasiatheria_c ANCESTRAL SPECIES 23 ENSGT00390000008536 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000162428.b #15 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Chiroptera ANCESTRAL SPECIES 33 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000015352.n ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000162428.b #15 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Microchiroptera ANCESTRAL SPECIES 34 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000015352.n ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000162428.b #15 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Greater horseshoe bat MODERN SPECIES 2 AASDHPPT (ENSRFEG00010009049) #11 KBTBD3 (ENSRFEG00010009026) #12 MSANTD4 (ENSRFEG00010008997) #13 GRIA4 (ENSRFEG00010008848) #14 ENSRFEG00010008796 #15 ENSRFEG00010008776 ENSRFEG00010008674 #16 ENSRFEG00010008552 #17 ENSRFEG00010008486 #18 ENSRFEG00010008449 DDI1 (ENSRFEG00010008434) #19 ENSRFEG00010008414 PDGFD (ENSRFEG00010008344) #20 ENSRFEG00010008309 DYNC2H1 (ENSRFEG00010008170) #21 DCUN1D5 (ENSRFEG00010008035) #22 MMP13 (ENSRFEG00010007911) #23 ENSRFEG00010007869 MMP12 (ENSRFEG00010007757) #24 MMP3 (ENSRFEG00010007645) #25 MMP1 (ENSRFEG00010007604) #26 MMP10 (ENSRFEG00010007505) #27 MMP8 (ENSRFEG00010006863) #28 MMP27 (ENSRFEG00010006694) #29 MMP20 (ENSRFEG00010006633) #30 MMP7 (ENSRFEG00010006603) #31 ENSRFEG00010006590 ENSRFEG00010006546 #32 ENSRFEG00010006526 BIRC2 (ENSRFEG00010006459) #35 BIRC3 (ENSRFEG00010006379) #36 Microbat MODERN SPECIES 1076 ENSMLUG00000026461 DCUN1D5 (ENSMLUG00000006350) #22 ENSMLUG00000006344 #23 ENSMLUG00000030430 #23 MMP12 (ENSMLUG00000000992) #24 MMP3 (ENSMLUG00000000984) #25 ENSMLUG00000009131 #26 MMP8 (ENSMLUG00000008198) #28 MMP27 (ENSMLUG00000008174) #29 MMP20 (ENSMLUG00000008156) #30 MMP7 (ENSMLUG00000008134) #31 BIRC2 (ENSMLUG00000015779) #35 BIRC3 (ENSMLUG00000015772) #36 YAP1 (ENSMLUG00000000854) #37 CFAP300 (ENSMLUG00000001734) CEP126 (ENSMLUG00000002690) ANGPTL5 (ENSMLUG00000002681) Megabat MODERN SPECIES 3990 DCUN1D5 (ENSPVAG00000004994) #22 MMP13 (ENSPVAG00000004993) #23 MMP12 (ENSPVAG00000004990) #24 Equus ANCESTRAL SPECIES 25 ENSGT00390000015655.a ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000162555 #18 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 Horse MODERN SPECIES 28 ELMOD1 (ENSECAG00000010926) ALKBH8 (ENSECAG00000019425) #8 CWF19L2 (ENSECAG00000004314) #9 GUCY1A2 (ENSECAG00000018191) #10 AASDHPPT (ENSECAG00000013032) #11 KBTBD3 (ENSECAG00000012801) #12 MSANTD4 (ENSECAG00000011320) #13 GRIA4 (ENSECAG00000009916) #14 ENSECAG00000027719 #18 CASP1 (ENSECAG00000024367) #16 ENSECAG00000012876 #17 ENSECAG00000008723 #18 DDI1 (ENSECAG00000005520) #19 PDGFD (ENSECAG00000024746) #20 DYNC2H1 (ENSECAG00000016257) #21 DCUN1D5 (ENSECAG00000005717) #22 ENSECAG00000038696 MMP13 (ENSECAG00000005506) #23 MMP12 (ENSECAG00000056462) #24 MMP12 (ENSECAG00000019445) #25 MMP1 (ENSECAG00000046821) #26 MMP8 (ENSECAG00000044786) #28 MMP27 (ENSECAG00000019404) #29 MMP20 (ENSECAG00000011739) #30 MMP7 (ENSECAG00000021262) #31 TMEM123 (ENSECAG00000033952) #32 BIRC3 (ENSECAG00000012229) #35 BIRC3 (ENSECAG00000047232) #36 ENSECAG00000054274 YAP1 (ENSECAG00000008660) #37 CFAP300 (ENSECAG00000008152) Donkey MODERN SPECIES 12 GUCY1A2 (ENSEASG00005011012) #10 AASDHPPT (ENSEASG00005011016) #11 KBTBD3 (ENSEASG00005011019) #12 MSANTD4 (ENSEASG00005011020) #13 GRIA4 (ENSEASG00005011024) #14 ENSEASG00005011027 ENSEASG00005026662 #18 ENSEASG00005011029 #16 ENSEASG00005011030 #17 ENSEASG00005011031 #18 PDGFD (ENSEASG00005011032) #20 DDI1 (ENSEASG00005011033) #19 ENSEASG00005011036 #21 ENSEASG00005030689 #21 ENSEASG00005011042 #21 ENSEASG00005011043 #22 MMP13 (ENSEASG00005011044) #23 MMP12 (ENSEASG00005011046) #24 MMP3 (ENSEASG00005011047) #25 MMP1 (ENSEASG00005011048) #26 MMP8 (ENSEASG00005011052) #28 MMP27 (ENSEASG00005011124) #29 MMP20 (ENSEASG00005011128) #30 MMP7 (ENSEASG00005011134) #31 TMEM123 (ENSEASG00005011137) #32 BIRC2 (ENSEASG00005011141) #35 BIRC3 (ENSEASG00005011145) #36 YAP1 (ENSEASG00005011146) #37 CFAP300 (ENSEASG00005031746) CEP126 (ENSEASG00005011151) ANGPTL5 (ENSEASG00005011153) Artiodactyla ANCESTRAL SPECIES 1 ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Suina ANCESTRAL SPECIES 5 ENSGT01040000240879 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00910000148412 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Chacoan peccary MODERN SPECIES 29 SLC35F2 (ENSCWAG00000005147) ENSCWAG00000005234 ELMOD1 (ENSCWAG00000005287) ALKBH8 (ENSCWAG00000005467) #8 CWF19L2 (ENSCWAG00000005525) #9 AASDHPPT (ENSCWAG00000005548) #11 KBTBD3 (ENSCWAG00000005570) #12 MSANTD4 (ENSCWAG00000005595) #13 GRIA4 (ENSCWAG00000005641) #14 ENSCWAG00000006028 #16 ENSCWAG00000006740 #17 ENSCWAG00000006786 PDGFD (ENSCWAG00000006820) #20 DDI1 (ENSCWAG00000006891) #19 DYNC2H1 (ENSCWAG00000007039) #21 DCUN1D5 (ENSCWAG00000009255) #22 MMP13 (ENSCWAG00000009364) #23 MMP12 (ENSCWAG00000009480) #24 MMP3 (ENSCWAG00000009566) #25 MMP1 (ENSCWAG00000009665) #26 ENSCWAG00000000098 #26 MMP8 (ENSCWAG00000000204) #28 MMP27 (ENSCWAG00000000250) #29 MMP20 (ENSCWAG00000000288) #30 MMP7 (ENSCWAG00000000312) #31 TMEM123 (ENSCWAG00000000329) #32 ENSCWAG00000000343 #34 BIRC2 (ENSCWAG00000000357) #35 BIRC3 (ENSCWAG00000000395) #36 YAP1 (ENSCWAG00000000439) #37 CFAP300 (ENSCWAG00000000530) Pig MODERN SPECIES 17 ALKBH8 (ENSSSCG00000024628) #8 ENSSSCG00000056752 CWF19L2 (ENSSSCG00000028201) #9 KBTBD3 (ENSSSCG00000014999) #12 AASDHPPT (ENSSSCG00000014998) #11 MSANTD4 (ENSSSCG00000026833) #13 GRIA4 (ENSSSCG00000030565) #14 ENSSSCG00000037097 CASP1 (ENSSSCG00000028711) #16 ENSSSCG00000014997 #17 ENSSSCG00000014996 #18 ENSSSCG00000032358 DDI1 (ENSSSCG00000014995) #19 PDGFD (ENSSSCG00000014994) #20 DYNC2H1 (ENSSSCG00000033937) #21 DCUN1D5 (ENSSSCG00000014989) #22 ENSSSCG00000035427 MMP13 (ENSSSCG00000014988) #23 MMP12 (ENSSSCG00000014987) #24 MMP3 (ENSSSCG00000059078) #25 MMP1 (ENSSSCG00000014985) #26 MMP8 (ENSSSCG00000029675) #28 MMP27 (ENSSSCG00000014984) #29 MMP20 (ENSSSCG00000014983) #30 MMP7 (ENSSSCG00000014982) #31 ENSSSCG00000031170 #32 BIRC2 (ENSSSCG00000063374) #35 BIRC3 (ENSSSCG00000027529) #36 YAP1 (ENSSSCG00000031429) #37 CFAP300 (ENSSSCG00000014980) CEP126 (ENSSSCG00000014979) Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000157765 #10 ENSGT00940000155627 #9 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719.a #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Pecora ANCESTRAL SPECIES 7 ENSGT00950000183144.A.j ENSGT00940000154336.d ENSGT00390000017288.b ENSGT00390000003919 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719.a #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Yarkand deer MODERN SPECIES IZUMO1R (ENSCHYG00000000006) GPR83 (ENSCHYG00000000012) MRE11 (ENSCHYG00000000023) ANKRD49 (ENSCHYG00000000041) ENSCHYG00000000056 #11 KBTBD3 (ENSCHYG00000000060) #12 MSANTD4 (ENSCHYG00000000065) #13 GRIA4 (ENSCHYG00000000113) #14 ENSCHYG00000000131 ENSCHYG00000000171 #16 ENSCHYG00000000211 #17 ENSCHYG00000000233 PDGFD (ENSCHYG00000000341) #20 DDI1 (ENSCHYG00000000457) #19 DYNC2H1 (ENSCHYG00000000537) #21 DCUN1D5 (ENSCHYG00000000628) #22 MMP13 (ENSCHYG00000000652) #23 MMP12 (ENSCHYG00000000688) #24 MMP3 (ENSCHYG00000000701) #25 MMP1 (ENSCHYG00000000723) #26 ENSCHYG00000000747 #26 MMP8 (ENSCHYG00000000770) #28 MMP27 (ENSCHYG00000000792) #29 MMP20 (ENSCHYG00000000837) #30 MMP7 (ENSCHYG00000000857) #31 TMEM123 (ENSCHYG00000000870) #32 ENSCHYG00000000892 #34 BIRC2 (ENSCHYG00000000902) #35 BIRC3 (ENSCHYG00000000926) #36 YAP1 (ENSCHYG00000000950) #37 CFAP300 (ENSCHYG00000000983) Percora_a ANCESTRAL SPECIES 6 ENSGT00950000183144.A.j ENSGT00940000154336.d ENSGT00390000017288.b ENSGT00390000003919 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719.a #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Bovidae ANCESTRAL SPECIES 6 ENSGT00940000154976.p.b.b ENSGT00950000183144.A.j ENSGT00940000154336.d ENSGT00390000017288.b ENSGT00390000003919 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000171276 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719.a #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Caprinae ANCESTRAL SPECIES 6 ENSGT00950000183144.A.j ENSGT00940000154336.d ENSGT00390000017288.b ENSGT00390000003919 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT01030000234886 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000171276 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 Goat MODERN SPECIES 6 ANKRD49 (ENSCHIG00000015614) AASDHPPT (ENSCHIG00000017726) #11 KBTBD3 (ENSCHIG00000012819) #12 ENSCHIG00000013896 #13 MSANTD4 (ENSCHIG00000021603) #13 ENSCHIG00000022465 #14 ENSCHIG00000019889 #14 ENSCHIG00000009053 ENSCHIG00000020857 ENSCHIG00000013458 #16 ENSCHIG00000023433 #17 ENSCHIG00000008146 DDI1 (ENSCHIG00000007991) #19 PDGFD (ENSCHIG00000006770) #20 DYNC2H1 (ENSCHIG00000017543) #21 DCUN1D5 (ENSCHIG00000021271) #22 MMP13 (ENSCHIG00000021039) #23 MMP12 (ENSCHIG00000026649) #24 MMP3 (ENSCHIG00000022679) #25 MMP1 (ENSCHIG00000010427) #26 MMP8 (ENSCHIG00000026968) #28 MMP27 (ENSCHIG00000012641) #29 MMP20 (ENSCHIG00000026359) #30 MMP7 (ENSCHIG00000026468) #31 ENSCHIG00000013361 #32 BIRC2 (ENSCHIG00000017347) #35 BIRC3 (ENSCHIG00000012208) #36 ENSCHIG00000018499 ENSCHIG00000023994 YAP1 (ENSCHIG00000017090) #37 CFAP300 (ENSCHIG00000009065) Rambouillet Sheep MODERN SPECIES 6 ENSOARG00020011815 GPR83 (ENSOARG00020011841) MRE11 (ENSOARG00020011913) ANKRD49 (ENSOARG00020012037) AASDHPPT (ENSOARG00020012064) #11 KBTBD3 (ENSOARG00020012182) #12 MSANTD4 (ENSOARG00020012278) #13 GRIA4 (ENSOARG00020012341) #14 ENSOARG00020013091 ENSOARG00020013115 ENSOARG00020013177 #17 ENSOARG00020014135 PDGFD (ENSOARG00020014159) #20 DDI1 (ENSOARG00020014392) #19 DYNC2H1 (ENSOARG00020014518) #21 DCUN1D5 (ENSOARG00020019585) #22 MMP12 (ENSOARG00020019763) #24 MMP1 (ENSOARG00020019819) #26 MMP8 (ENSOARG00020019912) #28 MMP27 (ENSOARG00020020000) #29 MMP20 (ENSOARG00020020039) #30 MMP7 (ENSOARG00020020127) #31 MMP7 (ENSOARG00020020219) #31 BIRC2 (ENSOARG00020020262) #35 ENSOARG00020020385 #34 BIRC3 (ENSOARG00020020405) #36 YAP1 (ENSOARG00020020483) #37 CFAP300 (ENSOARG00020021370) ANGPTL5 (ENSOARG00020021669) TRPC6 (ENSOARG00020021734) ARHGAP42 (ENSOARG00020022418) Bovinae ANCESTRAL SPECIES 21 ENSGT00940000158647.g.a.c ENSGT00950000183144.A.j ENSGT00940000154336.d ENSGT00390000017288.b ENSGT00390000003919 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000171276 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719.a #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Bos ANCESTRAL SPECIES 20 ENSGT00940000154336.d ENSGT00390000017288.b ENSGT00390000003919 ENSGT00390000004663.l #11 ENSGT00390000004663.k #11 ENSGT00940000158415.f #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000171276 ENSGT00940000163552.a.b.b.a ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719.a #34 ENSGT00940000154175.i.b.l #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT01100000263481.n.a.b.a.b.a.b.a.b.a.a.a.b ENSGT00510000047559 Bos_b ANCESTRAL SPECIES 19 ENSGT00940000154336.d ENSGT00390000017288.b ENSGT00390000003919 ENSGT00390000004663.l #11 ENSGT00390000004663.k #11 ENSGT00940000158415.f #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000174020.a.b ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000163552.a.b.b.a ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b.lb #26 ENSGT00940000154907.b.kb #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719.a #34 ENSGT00940000154175.i.b.l.a #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559.d.b Hybrid Bos Indicus MODERN SPECIES 6 MRE11 (ENSBIXG00005014792) ANKRD49 (ENSBIXG00005014841) ENSBIXG00005014848 AASDHPPT (ENSBIXG00005014858) #11 KBTBD3 (ENSBIXG00005014892) #12 MSANTD4 (ENSBIXG00005014916) #13 GRIA4 (ENSBIXG00005014996) #14 ENSBIXG00005015044 ENSBIXG00005002205 ENSBIXG00005015170 #16 ENSBIXG00005015227 #17 ENSBIXG00005005639 DDI1 (ENSBIXG00005015259) #19 PDGFD (ENSBIXG00005015295) #20 DYNC2H1 (ENSBIXG00005006562) #21 DCUN1D5 (ENSBIXG00005015519) #22 ENSBIXG00005007135 MMP13 (ENSBIXG00005015552) #23 MMP12 (ENSBIXG00005015572) #24 MMP3 (ENSBIXG00005015577) #25 ENSBIXG00005002351 #26 ENSBIXG00005015654 #26 MMP8 (ENSBIXG00005015697) #28 MMP27 (ENSBIXG00005007505) #29 MMP20 (ENSBIXG00005015765) #30 MMP7 (ENSBIXG00005015796) #31 ENSBIXG00005015827 #32 ENSBIXG00005015835 ENSBIXG00005015904 #35 BIRC3 (ENSBIXG00005002521) #36 YAP1 (ENSBIXG00005016306) #37 Cow MODERN SPECIES 6 MSANTD4 (ENSBTAG00000023989) #13 GRIA4 (ENSBTAG00000006176) #14 ENSBTAG00000055258 CASP1 (ENSBTAG00000050239) #16 CASP4 (ENSBTAG00000020884) #17 ENSBTAG00000053811 ENSBTAG00000051613 ENSBTAG00000052675 PDGFD (ENSBTAG00000034827) #20 DDI1 (ENSBTAG00000002887) #19 ENSBTAG00000049312 ENSBTAG00000051741 ENSBTAG00000047461 #21 ENSBTAG00000048939 #21 ENSBTAG00000019309 #21 DCUN1D5 (ENSBTAG00000003087) #22 ENSBTAG00000050505 MMP13 (ENSBTAG00000015059) #23 MMP12 (ENSBTAG00000053542) #24 MMP3 (ENSBTAG00000037768) #25 MMP1 (ENSBTAG00000048029) #26 ENSBTAG00000015818 #26 MMP8 (ENSBTAG00000046732) #28 MMP27 (ENSBTAG00000040567) #29 MMP20 (ENSBTAG00000014251) #30 MMP7 (ENSBTAG00000004594) #31 ENSBTAG00000049233 #32 ENSBTAG00000052956 #34 BIRC2 (ENSBTAG00000035735) #35 BIRC3 (ENSBTAG00000024918) #36 YAP1 (ENSBTAG00000039307) #37 Bos_a ANCESTRAL SPECIES 15 ENSGT00940000154336.d ENSGT00390000017288.b ENSGT00390000003919 ENSGT00390000004663.k #11 ENSGT00940000158415.f #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000171276 ENSGT00940000163552.a.b.b.a ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719.a #34 ENSGT00940000154175.i.b.l #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT01100000263481.n.a.b.a.b.a.b.a.b.a.a.a.b ENSGT00510000047559 Domestic yak MODERN SPECIES 4 IZUMO1R (ENSBGRG00000021756) MRE11 (ENSBGRG00000021342) ANKRD49 (ENSBGRG00000021288) ENSBGRG00000021208 #11 KBTBD3 (ENSBGRG00000021150) #12 MSANTD4 (ENSBGRG00000021125) #13 GRIA4 (ENSBGRG00000020983) #14 ENSBGRG00000020667 #16 ENSBGRG00000020533 #17 ENSBGRG00000020511 ENSBGRG00000020487 DDI1 (ENSBGRG00000020479) #19 PDGFD (ENSBGRG00000020375) #20 ENSBGRG00000020346 DYNC2H1 (ENSBGRG00000019097) #21 DCUN1D5 (ENSBGRG00000018907) #22 MMP13 (ENSBGRG00000018832) #23 MMP12 (ENSBGRG00000018771) #24 MMP3 (ENSBGRG00000018711) #25 MMP1 (ENSBGRG00000018480) #26 ENSBGRG00000018167 #26 MMP8 (ENSBGRG00000018057) #28 MMP27 (ENSBGRG00000017957) #29 MMP20 (ENSBGRG00000017827) #30 MMP7 (ENSBGRG00000017747) #31 ENSBGRG00000017169 #32 ENSBGRG00000017104 #34 ENSBGRG00000016826 #35 BIRC3 (ENSBGRG00000016714) #36 ENSBGRG00000016649 YAP1 (ENSBGRG00000016272) #37 Wild yak MODERN SPECIES 115 ENSBMUG00000012841 ENSBMUG00000012835 MTMR12 (ENSBMUG00000012798) ENSBMUG00000012710 PDZD2 (ENSBMUG00000012698) ENSBMUG00000012684 ENSBMUG00000012666 C5orf22 (ENSBMUG00000012660) DROSHA (ENSBMUG00000012602) CDH6 (ENSBMUG00000012474) DYNC2H1 (ENSBMUG00000012095) #21 DCUN1D5 (ENSBMUG00000011697) #22 American bison MODERN SPECIES 3035 DDI1 (ENSBBBG00000005435) #19 PDGFD (ENSBBBG00000007015) #20 DYNC2H1 (ENSBBBG00000020480) #21 DCUN1D5 (ENSBBBG00000007470) #22 MMP13 (ENSBBBG00000020565) #23 MMP12 (ENSBBBG00000020578) #24 MMP3 (ENSBBBG00000008782) #25 MMP1 (ENSBBBG00000005557) #26 Siberian musk deer MODERN SPECIES 1172 GPR83 (ENSMMSG00000009714) ENSMMSG00000009157 ANKRD49 (ENSMMSG00000009101) AASDHPPT (ENSMMSG00000009083) #11 KBTBD3 (ENSMMSG00000009059) #12 ENSMMSG00000008975 #13 GRIA4 (ENSMMSG00000008872) #14 ENSMMSG00000008496 #16 ENSMMSG00000008366 #17 DDI1 (ENSMMSG00000008336) #19 PDGFD (ENSMMSG00000008276) #20 ENSMMSG00000008237 ENSMMSG00000008228 ENSMMSG00000008190 DYNC2H1 (ENSMMSG00000020899) #21 DCUN1D5 (ENSMMSG00000020795) #22 MMP13 (ENSMMSG00000020775) #23 MMP12 (ENSMMSG00000020713) #24 MMP3 (ENSMMSG00000020691) #25 MMP1 (ENSMMSG00000020664) #26 MMP8 (ENSMMSG00000020627) #28 MMP27 (ENSMMSG00000020593) #29 MMP20 (ENSMMSG00000020524) #30 MMP7 (ENSMMSG00000020500) #31 ENSMMSG00000020366 #32 ENSMMSG00000020342 #34 ENSMMSG00000020291 #35 ENSMMSG00000020239 #36 ENSMMSG00000020213 YAP1 (ENSMMSG00000019446) #37 CFAP300 (ENSMMSG00000019347) Cetacea ANCESTRAL SPECIES 4 ENSGT01040000240879 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000157765 #10 ENSGT00940000155627 #9 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a Blue whale MODERN SPECIES 19 AASDHPPT (ENSBMSG00010007644) #11 KBTBD3 (ENSBMSG00010007657) #12 MSANTD4 (ENSBMSG00010007664) #13 ENSBMSG00010007668 ENSBMSG00010006162 ENSBMSG00010006210 #16 ENSBMSG00010006394 #17 CASP12 (ENSBMSG00010006435) #18 PDGFD (ENSBMSG00010006472) #20 DDI1 (ENSBMSG00010006488) #19 ENSBMSG00010006504 ENSBMSG00010006513 ENSBMSG00010006519 DYNC2H1 (ENSBMSG00010006610) #21 ENSBMSG00010006692 DCUN1D5 (ENSBMSG00010006711) #22 MMP13 (ENSBMSG00010006744) #23 MMP3 (ENSBMSG00010006771) #25 MMP1 (ENSBMSG00010006797) #26 MMP8 (ENSBMSG00010006829) #28 MMP27 (ENSBMSG00010006850) #29 MMP20 (ENSBMSG00010006883) #30 ENSBMSG00010006936 MMP7 (ENSBMSG00010006965) #31 ENSBMSG00010006981 #32 BIRC2 (ENSBMSG00010007026) #35 BIRC3 (ENSBMSG00010007044) #36 YAP1 (ENSBMSG00010007087) #37 CFAP300 (ENSBMSG00010007148) CEP126 (ENSBMSG00010007195) ANGPTL5 (ENSBMSG00010007219) Odontoceti ANCESTRAL SPECIES 4 ENSGT01040000240879 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000157765 #10 ENSGT00940000155627 #9 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a Sperm whale MODERN SPECIES 7 ELMOD1 (ENSPCTG00005005706) ALKBH8 (ENSPCTG00005005892) #8 ENSPCTG00005005948 GUCY1A2 (ENSPCTG00005005964) #10 CWF19L2 (ENSPCTG00005006064) #9 AASDHPPT (ENSPCTG00005006202) #11 KBTBD3 (ENSPCTG00005006219) #12 MSANTD4 (ENSPCTG00005006230) #13 GRIA4 (ENSPCTG00005006290) #14 ENSPCTG00005006571 CASP1 (ENSPCTG00005006753) #16 ENSPCTG00005007398 #17 PDGFD (ENSPCTG00005007471) #20 DDI1 (ENSPCTG00005007507) #19 DYNC2H1 (ENSPCTG00005007602) #21 DCUN1D5 (ENSPCTG00005007734) #22 MMP13 (ENSPCTG00005007790) #23 MMP3 (ENSPCTG00005007829) #25 MMP1 (ENSPCTG00005007864) #26 MMP8 (ENSPCTG00005007904) #28 MMP27 (ENSPCTG00005007950) #29 MMP20 (ENSPCTG00005007995) #30 ENSPCTG00005008033 MMP7 (ENSPCTG00005008052) #31 ENSPCTG00005008079 TMEM123 (ENSPCTG00005008095) #32 BIRC3 (ENSPCTG00005008131) #35 YAP1 (ENSPCTG00005008267) #37 CFAP300 (ENSPCTG00005008410) CEP126 (ENSPCTG00005008482) ANGPTL5 (ENSPCTG00005008552) Odontoceti_a ANCESTRAL SPECIES 4 ENSGT01040000240879 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000157765 #10 ENSGT00940000155627 #9 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a Dolphin MODERN SPECIES 554 DCUN1D5 (ENSTTRG00000002624) #22 Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000157765 #10 ENSGT00950000182878.b.b.k.a.a ENSGT00940000155627 #9 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00390000015164.v.a.a ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 Vaquita MODERN SPECIES 19 ENSPSNG00000009179 CWF19L2 (ENSPSNG00000009225) #9 AASDHPPT (ENSPSNG00000009261) #11 KBTBD3 (ENSPSNG00000009333) #12 MSANTD4 (ENSPSNG00000009351) #13 GRIA4 (ENSPSNG00000009480) #14 ENSPSNG00000009900 ENSPSNG00000009923 ENSPSNG00000010097 #16 ENSPSNG00000010712 #17 ENSPSNG00000010961 #18 PDGFD (ENSPSNG00000011015) #20 DDI1 (ENSPSNG00000011079) #19 ENSPSNG00000011106 ENSPSNG00000011129 #21 DCUN1D5 (ENSPSNG00000011176) #22 MMP13 (ENSPSNG00000011272) #23 ENSPSNG00000011394 MMP3 (ENSPSNG00000011464) #25 MMP1 (ENSPSNG00000011516) #26 MMP8 (ENSPSNG00000011640) #28 MMP27 (ENSPSNG00000011758) #29 MMP20 (ENSPSNG00000011898) #30 ENSPSNG00000012017 ENSPSNG00000012055 ENSPSNG00000012185 ENSPSNG00000012601 FOLH1 (ENSPSNG00000012683) ENSPSNG00000012743 ENSPSNG00000012784 ENSPSNG00000012854 Monodontidae ANCESTRAL SPECIES 2 ENSGT00940000157765 #10 ENSGT00950000182878.b.b.k.a.a ENSGT00940000155627 #9 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00390000005568.fb.l.b.a ENSGT01010000222906.b.b.b ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00390000015164.v.a.a ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 Narwhal MODERN SPECIES 314 GUCY1A2 (ENSMMNG00015014900) #10 ENSMMNG00015014920 CWF19L2 (ENSMMNG00015014936) #9 AASDHPPT (ENSMMNG00015014982) #11 KBTBD3 (ENSMMNG00015014990) #12 MSANTD4 (ENSMMNG00015014999) #13 GRIA4 (ENSMMNG00015015040) #14 ENSMMNG00015015127 ENSMMNG00015015191 #16 ENSMMNG00015015306 #17 CASP12 (ENSMMNG00015015330) #18 PDGFD (ENSMMNG00015015343) #20 DDI1 (ENSMMNG00015015358) #19 ENSMMNG00015015371 DYNC2H1 (ENSMMNG00015015422) #21 DCUN1D5 (ENSMMNG00015015752) #22 MMP13 (ENSMMNG00015015808) #23 MMP3 (ENSMMNG00015015864) #25 MMP1 (ENSMMNG00015015906) #26 MMP8 (ENSMMNG00015015954) #28 MMP27 (ENSMMNG00015016013) #29 MMP20 (ENSMMNG00015016079) #30 FOLH1 (ENSMMNG00015016426) ENSMMNG00015017752 ENSMMNG00015017789 MMP7 (ENSMMNG00015017833) #31 TMEM123 (ENSMMNG00015017867) #32 ENSMMNG00015017889 BIRC2 (ENSMMNG00015017921) #35 BIRC3 (ENSMMNG00015017985) #36 YAP1 (ENSMMNG00015018068) #37 Beluga whale MODERN SPECIES 75 GUCY1A2 (ENSDLEG00000014519) #10 CWF19L2 (ENSDLEG00000014450) #9 AASDHPPT (ENSDLEG00000014433) #11 KBTBD3 (ENSDLEG00000014428) #12 MSANTD4 (ENSDLEG00000014424) #13 GRIA4 (ENSDLEG00000014352) #14 CASP1 (ENSDLEG00000014328) #16 ENSDLEG00000014313 #17 ENSDLEG00000014270 #18 DDI1 (ENSDLEG00000014267) #19 PDGFD (ENSDLEG00000014235) #20 ENSDLEG00000014223 ENSDLEG00000014217 DYNC2H1 (ENSDLEG00000013026) #21 DCUN1D5 (ENSDLEG00000012915) #22 MMP13 (ENSDLEG00000012870) #23 MMP3 (ENSDLEG00000012844) #25 MMP1 (ENSDLEG00000012823) #26 MMP8 (ENSDLEG00000012801) #28 MMP27 (ENSDLEG00000012775) #29 MMP20 (ENSDLEG00000012733) #30 Camelidae ANCESTRAL SPECIES 32 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620.mb #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Alpaca MODERN SPECIES 659 ENSVPAG00000011348 #21 DCUN1D5 (ENSVPAG00000011347) #22 Arabian camel MODERN SPECIES 1 ENSCDRG00005002094 AASDHPPT (ENSCDRG00005002082) #11 KBTBD3 (ENSCDRG00005002074) #12 MSANTD4 (ENSCDRG00005002065) #13 GRIA4 (ENSCDRG00005001949) #14 ENSCDRG00005001784 #16 ENSCDRG00005001740 #17 DDI1 (ENSCDRG00005001731) #19 PDGFD (ENSCDRG00005001697) #20 DYNC2H1 (ENSCDRG00005001586) #21 DCUN1D5 (ENSCDRG00005001503) #22 MMP13 (ENSCDRG00005001466) #23 MMP12 (ENSCDRG00005001447) #24 MMP3 (ENSCDRG00005001425) #25 MMP1 (ENSCDRG00005001400) #26 MMP8 (ENSCDRG00005001367) #28 MMP27 (ENSCDRG00005001340) #29 MMP20 (ENSCDRG00005001309) #30 MMP7 (ENSCDRG00005001294) #31 ENSCDRG00005001282 #32 ENSCDRG00005001278 #34 BIRC2 (ENSCDRG00005001258) #35 BIRC3 (ENSCDRG00005001220) #36 YAP1 (ENSCDRG00005001090) #37 CFAP300 (ENSCDRG00005001024) CEP126 (ENSCDRG00005000987) Euarchontoglires ANCESTRAL SPECIES 1 ENSGT00390000008536 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000162428.b #15 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.j #33 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 Primates ANCESTRAL SPECIES ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162428.b #15 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Strepsirrhini ANCESTRAL SPECIES 6 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00940000162428.b #15 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Bushbaby MODERN SPECIES 116 ENSOGAG00000033509 ENSOGAG00000034157 HEPHL1 (ENSOGAG00000015952) PANX1 (ENSOGAG00000015294) IZUMO1R (ENSOGAG00000002522) GPR83 (ENSOGAG00000002520) MRE11 (ENSOGAG00000012154) ANKRD49 (ENSOGAG00000012155) C11orf97 (ENSOGAG00000033264) FUT4 (ENSOGAG00000025107) PIWIL4 (ENSOGAG00000012156) AMOTL1 (ENSOGAG00000003989) CWC15 (ENSOGAG00000001686) KDM4D (ENSOGAG00000032607) DYNC2H1 (ENSOGAG00000033838) #21 DCUN1D5 (ENSOGAG00000010225) #22 MMP13 (ENSOGAG00000010224) #23 MMP12 (ENSOGAG00000010221) #24 MMP3 (ENSOGAG00000010220) #25 MMP1 (ENSOGAG00000010215) #26 MMP10 (ENSOGAG00000010212) #27 MMP8 (ENSOGAG00000015256) #28 MMP27 (ENSOGAG00000015250) #29 MMP20 (ENSOGAG00000015247) #30 MMP7 (ENSOGAG00000024291) #31 ENSOGAG00000028751 #32 ENSOGAG00000010377 #35 BIRC3 (ENSOGAG00000005946) #36 ENSOGAG00000026633 YAP1 (ENSOGAG00000002885) #37 CFAP300 (ENSOGAG00000024314) Lemuriformes ANCESTRAL SPECIES 13 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349.b ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Mouse lemur MODERN SPECIES 27 GUCY1A2 (ENSMICG00000004925) #10 ENSMICG00000035020 ENSMICG00000036566 AASDHPPT (ENSMICG00000032630) #11 KBTBD3 (ENSMICG00000030981) #12 MSANTD4 (ENSMICG00000036595) #13 GRIA4 (ENSMICG00000003112) #14 ENSMICG00000042671 ENSMICG00000028150 ENSMICG00000001846 #16 CASP12 (ENSMICG00000001832) #18 ENSMICG00000001838 #17 DDI1 (ENSMICG00000002464) #19 PDGFD (ENSMICG00000002460) #20 DYNC2H1 (ENSMICG00000029576) #21 DCUN1D5 (ENSMICG00000006329) #22 MMP13 (ENSMICG00000006323) #23 MMP12 (ENSMICG00000006319) #24 MMP3 (ENSMICG00000006301) #25 MMP1 (ENSMICG00000006291) #26 MMP10 (ENSMICG00000006282) #27 MMP8 (ENSMICG00000014462) #28 MMP27 (ENSMICG00000036959) #29 MMP20 (ENSMICG00000002940) #30 MMP7 (ENSMICG00000002935) #31 ENSMICG00000016656 #32 ENSMICG00000044293 BIRC3 (ENSMICG00000002746) #36 YAP1 (ENSMICG00000031456) #37 CFAP300 (ENSMICG00000017739) CEP126 (ENSMICG00000009111) Lemuriformes_a ANCESTRAL SPECIES 22 ENSGT01100000263709 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349.b ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Greater bamboo lemur MODERN SPECIES 475 PDGFD (ENSPSMG00000008395) #20 DDI1 (ENSPSMG00000008421) #19 DYNC2H1 (ENSPSMG00000008986) #21 DCUN1D5 (ENSPSMG00000009263) #22 MMP13 (ENSPSMG00000009286) #23 MMP12 (ENSPSMG00000009292) #24 MMP3 (ENSPSMG00000009315) #25 MMP1 (ENSPSMG00000009331) #26 MMP10 (ENSPSMG00000009342) #27 ENSPSMG00000009358 #26 MMP8 (ENSPSMG00000009363) #28 MMP27 (ENSPSMG00000009374) #29 MMP20 (ENSPSMG00000009381) #30 MMP7 (ENSPSMG00000009394) #31 ENSPSMG00000009400 #32 BIRC2 (ENSPSMG00000009475) #35 BIRC3 (ENSPSMG00000009531) #36 YAP1 (ENSPSMG00000009653) #37 CFAP300 (ENSPSMG00000009802) Coquerels sifaka MODERN SPECIES 760 CWF19L2 (ENSPCOG00000018032) #9 ENSPCOG00000015897 GUCY1A2 (ENSPCOG00000016375) #10 AASDHPPT (ENSPCOG00000014297) #11 KBTBD3 (ENSPCOG00000021176) #12 MSANTD4 (ENSPCOG00000023276) #13 GRIA4 (ENSPCOG00000028018) #14 CARD18 (ENSPCOG00000012524) ENSPCOG00000028357 #16 ENSPCOG00000019189 ##15 ENSPCOG00000013698 #17 ENSPCOG00000021168 #17 PDGFD (ENSPCOG00000018484) #20 ENSPCOG00000025113 #21 ENSPCOG00000027848 #21 DCUN1D5 (ENSPCOG00000004961) #22 MMP13 (ENSPCOG00000028792) #23 MMP12 (ENSPCOG00000015277) #24 MMP3 (ENSPCOG00000023323) #25 MMP1 (ENSPCOG00000022669) #26 MMP10 (ENSPCOG00000017692) #27 MMP8 (ENSPCOG00000003235) #28 MMP27 (ENSPCOG00000024142) #29 MMP20 (ENSPCOG00000015806) #30 MMP7 (ENSPCOG00000027243) #31 TMEM123 (ENSPCOG00000005902) #32 BIRC2 (ENSPCOG00000022626) #35 BIRC3 (ENSPCOG00000009368) #36 YAP1 (ENSPCOG00000017226) #37 CFAP300 (ENSPCOG00000001504) CEP126 (ENSPCOG00000024276) Haplorrhini ANCESTRAL SPECIES ENSGT00390000008536 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Tarsier DUPLICATION Tarsier MODERN SPECIES 4417 DYNC2H1 (ENSTSYG00000006371) #21 DCUN1D5 (ENSTSYG00000001262) #22 MMP13 (ENSTSYG00000009858) #23 Tarsier MODERN SPECIES 1546 ENSTSYG00000035459 #22 ASAP1 (ENSTSYG00000007178) Simiiformes ANCESTRAL SPECIES ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.b #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Catarrhini ANCESTRAL SPECIES 1 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.a #16 ENSGT00940000159114.a.b #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000171202 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 Cercopithecidae ANCESTRAL SPECIES ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.a #16 ENSGT00940000159114.a.b #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000171202 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00390000004524.c.a.a.a.a.a.a ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.a #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000171202 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 Vervet Monkey MODERN SPECIES ENSCSAG00000000602 AASDHPPT (ENSCSAG00000003042) #11 KBTBD3 (ENSCSAG00000003044) #12 MSANTD4 (ENSCSAG00000003048) #13 GRIA4 (ENSCSAG00000003058) #14 CARD18 (ENSCSAG00000000603) ENSCSAG00000003063 #16 ENSCSAG00000003066 #16 ENSCSAG00000003073 #16 CASP5 (ENSCSAG00000003077) #17 CASP4 (ENSCSAG00000003080) #17 CASP12 (ENSCSAG00000003084) #18 DDI1 (ENSCSAG00000000604) #19 PDGFD (ENSCSAG00000003085) #20 DYNC2H1 (ENSCSAG00000003153) #21 DCUN1D5 (ENSCSAG00000003173) #22 MMP13 (ENSCSAG00000003185) #23 MMP12 (ENSCSAG00000003188) #24 MMP3 (ENSCSAG00000003190) #25 MMP1 (ENSCSAG00000003198) #26 MMP10 (ENSCSAG00000003203) #27 MMP8 (ENSCSAG00000003209) #28 MMP27 (ENSCSAG00000003213) #29 ENSCSAG00000000605 MMP20 (ENSCSAG00000003216) #30 MMP7 (ENSCSAG00000003219) #31 TMEM123 (ENSCSAG00000003220) #32 BIRC3 (ENSCSAG00000003222) #36 YAP1 (ENSCSAG00000003224) #37 CFAP300 (ENSCSAG00000003227) CEP126 (ENSCSAG00000003230) Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00910000147733 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.a #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000171202 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 Cercopithecinae_b ANCESTRAL SPECIES 21 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00910000147733 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.a #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000171202 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 Cercopithecinae_d ANCESTRAL SPECIES 45 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00910000147733 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.a #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000171202 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00910000147719 #34 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 Sooty mangabey MODERN SPECIES 138 AASDHPPT (ENSCATG00000043976) #11 KBTBD3 (ENSCATG00000044798) #12 MSANTD4 (ENSCATG00000030475) #13 GRIA4 (ENSCATG00000039166) #14 ENSCATG00000040187 CARD18 (ENSCATG00000044271) CASP1 (ENSCATG00000031081) #16 ENSCATG00000034782 #16 CASP5 (ENSCATG00000033400) #17 CASP4 (ENSCATG00000034381) #17 CASP12 (ENSCATG00000032709) #18 PDGFD (ENSCATG00000032486) #20 DDI1 (ENSCATG00000016207) #19 DYNC2H1 (ENSCATG00000022191) #21 ENSCATG00000045002 DCUN1D5 (ENSCATG00000045156) #22 MMP13 (ENSCATG00000037318) #23 MMP12 (ENSCATG00000032347) #24 MMP3 (ENSCATG00000040255) #25 MMP1 (ENSCATG00000044122) #26 MMP10 (ENSCATG00000032332) #27 MMP8 (ENSCATG00000035287) #28 MMP27 (ENSCATG00000043668) #29 MMP20 (ENSCATG00000043912) #30 MMP7 (ENSCATG00000044241) #31 Drill MODERN SPECIES 895 PDGFD (ENSMLEG00000028545) #20 DYNC2H1 (ENSMLEG00000038133) #21 DCUN1D5 (ENSMLEG00000043262) #22 MMP13 (ENSMLEG00000033536) #23 MMP12 (ENSMLEG00000031646) #24 MMP3 (ENSMLEG00000043132) #25 ENSMLEG00000032101 MMP1 (ENSMLEG00000041475) #26 MMP10 (ENSMLEG00000031529) #27 MMP8 (ENSMLEG00000042565) #28 MMP27 (ENSMLEG00000031462) #29 MMP20 (ENSMLEG00000030794) #30 MMP7 (ENSMLEG00000031118) #31 TMEM123 (ENSMLEG00000034191) #32 ENSMLEG00000035112 #34 BIRC2 (ENSMLEG00000035461) #35 BIRC3 (ENSMLEG00000041716) #36 YAP1 (ENSMLEG00000041493) #37 Olive baboon MODERN SPECIES 3 KBTBD3 (ENSPANG00000014883) #12 MSANTD4 (ENSPANG00000017474) #13 GRIA4 (ENSPANG00000003734) #14 ENSPANG00000034834 ENSPANG00000040645 CARD18 (ENSPANG00000041528) ENSPANG00000003972 #16 ENSPANG00000032384 #16 ENSPANG00000046546 #16 CASP1 (ENSPANG00000007465) #16 CASP5 (ENSPANG00000022854) #17 CASP12 (ENSPANG00000003600) #18 ENSPANG00000047317 PDGFD (ENSPANG00000017124) #20 DYNC2H1 (ENSPANG00000023174) #21 DCUN1D5 (ENSPANG00000007860) #22 ENSPANG00000041736 MMP13 (ENSPANG00000016548) #23 MMP12 (ENSPANG00000018407) #24 MMP3 (ENSPANG00000014348) #25 MMP1 (ENSPANG00000018869) #26 MMP10 (ENSPANG00000007953) #27 MMP8 (ENSPANG00000019175) #28 MMP27 (ENSPANG00000032087) #29 MMP20 (ENSPANG00000003601) #30 MMP7 (ENSPANG00000012249) #31 TMEM123 (ENSPANG00000014629) #32 BIRC3 (ENSPANG00000018870) #36 YAP1 (ENSPANG00000007466) #37 ENSPANG00000047316 CEP126 (ENSPANG00000005405) Macaca ANCESTRAL SPECIES 2 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00910000147733 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.a #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Macaca_a ANCESTRAL SPECIES 3 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.a #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Rhesus MODERN SPECIES 5 AASDHPPT (ENSMMUG00000010990) #11 KBTBD3 (ENSMMUG00000010989) #12 MSANTD4 (ENSMMUG00000010988) #13 GRIA4 (ENSMMUG00000010987) #14 ENSMMUG00000049289 CARD18 (ENSMMUG00000021551) ENSMMUG00000009854 #16 ENSMMUG00000051672 CASP1 (ENSMMUG00000009852) #16 CASP5 (ENSMMUG00000009851) #17 CASP4 (ENSMMUG00000009850) #17 CASP12 (ENSMMUG00000016548) #18 DDI1 (ENSMMUG00000042509) #19 PDGFD (ENSMMUG00000005353) #20 DYNC2H1 (ENSMMUG00000018308) #21 DCUN1D5 (ENSMMUG00000007008) #22 MMP13 (ENSMMUG00000004253) #23 MMP12 (ENSMMUG00000004250) #24 MMP3 (ENSMMUG00000004249) #25 MMP1 (ENSMMUG00000002037) #26 MMP10 (ENSMMUG00000021764) #27 MMP8 (ENSMMUG00000004489) #28 ENSMMUG00000053278 MMP27 (ENSMMUG00000011015) #29 MMP20 (ENSMMUG00000011013) #30 MMP7 (ENSMMUG00000003405) #31 TMEM123 (ENSMMUG00000003403) #32 BIRC2 (ENSMMUG00000003400) #35 BIRC3 (ENSMMUG00000058594) #36 YAP1 (ENSMMUG00000003396) #37 CFAP300 (ENSMMUG00000003394) Crab-eating macaque MODERN SPECIES 5 GUCY1A2 (ENSMFAG00000034683) #10 AASDHPPT (ENSMFAG00000046243) #11 KBTBD3 (ENSMFAG00000031041) #12 MSANTD4 (ENSMFAG00000034061) #13 GRIA4 (ENSMFAG00000001913) #14 CARD18 (ENSMFAG00000037895) ENSMFAG00000039181 #16 ENSMFAG00000043576 #16 CASP1 (ENSMFAG00000001158) #16 CASP5 (ENSMFAG00000063780) #17 CASP4 (ENSMFAG00000000204) #17 CASP12 (ENSMFAG00000019805) #18 ENSMFAG00000058317 PDGFD (ENSMFAG00000035368) #20 DYNC2H1 (ENSMFAG00000039001) #21 DCUN1D5 (ENSMFAG00000033871) #22 MMP13 (ENSMFAG00000001049) #23 MMP12 (ENSMFAG00000037971) #24 MMP3 (ENSMFAG00000037925) #25 MMP1 (ENSMFAG00000035922) #26 MMP10 (ENSMFAG00000031795) #27 MMP8 (ENSMFAG00000032735) #28 MMP27 (ENSMFAG00000043441) #29 MMP20 (ENSMFAG00000035397) #30 MMP7 (ENSMFAG00000037818) #31 ENSMFAG00000060149 ENSMFAG00000056286 TMEM123 (ENSMFAG00000057826) #32 BIRC2 (ENSMFAG00000033018) #35 YAP1 (ENSMFAG00000037027) #37 CEP126 (ENSMFAG00000030828) Pig-tailed macaque MODERN SPECIES 204 ENSMNEG00000036279 #10 AASDHPPT (ENSMNEG00000032892) #11 KBTBD3 (ENSMNEG00000041894) #12 MSANTD4 (ENSMNEG00000028862) #13 GRIA4 (ENSMNEG00000039956) #14 ENSMNEG00000034986 CARD18 (ENSMNEG00000041604) ENSMNEG00000045362 #16 CASP1 (ENSMNEG00000007166) #16 CASP5 (ENSMNEG00000035890) #17 CASP4 (ENSMNEG00000027443) #17 CASP12 (ENSMNEG00000032441) #18 PDGFD (ENSMNEG00000036191) #20 DDI1 (ENSMNEG00000023817) #19 DYNC2H1 (ENSMNEG00000042907) #21 DCUN1D5 (ENSMNEG00000029266) #22 MMP13 (ENSMNEG00000037655) #23 MMP12 (ENSMNEG00000040391) #24 MMP3 (ENSMNEG00000043414) #25 MMP1 (ENSMNEG00000034618) #26 MMP10 (ENSMNEG00000026876) #27 MMP8 (ENSMNEG00000031542) #28 MMP27 (ENSMNEG00000041633) #29 MMP20 (ENSMNEG00000020408) #30 MMP7 (ENSMNEG00000040439) #31 TMEM123 (ENSMNEG00000040184) #32 BIRC2 (ENSMNEG00000038024) #35 BIRC3 (ENSMNEG00000040332) #36 YAP1 (ENSMNEG00000032086) #37 CFAP300 (ENSMNEG00000038673) CEP126 (ENSMNEG00000041461) Rhinopithecus ANCESTRAL SPECIES 347 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Golden snub-nosed monkey MODERN SPECIES 2119 DYNC2H1 (ENSRROG00000029529) #21 DCUN1D5 (ENSRROG00000033290) #22 MMP13 (ENSRROG00000042337) #23 MMP12 (ENSRROG00000033367) #24 MMP3 (ENSRROG00000043417) #25 MMP1 (ENSRROG00000030668) #26 MMP10 (ENSRROG00000042454) #27 MMP8 (ENSRROG00000037624) #28 MMP27 (ENSRROG00000008615) #29 MMP20 (ENSRROG00000038564) #30 MMP7 (ENSRROG00000044514) #31 TMEM123 (ENSRROG00000035161) #32 BIRC2 (ENSRROG00000039789) #35 BIRC3 (ENSRROG00000039472) #36 YAP1 (ENSRROG00000033903) #37 CFAP300 (ENSRROG00000030852) Black snub-nosed monkey MODERN SPECIES 1497 DYNC2H1 (ENSRBIG00000039808) #21 DCUN1D5 (ENSRBIG00000038043) #22 MMP13 (ENSRBIG00000038724) #23 MMP12 (ENSRBIG00000032255) #24 MMP3 (ENSRBIG00000018235) #25 MMP1 (ENSRBIG00000028827) #26 MMP10 (ENSRBIG00000027869) #27 MMP8 (ENSRBIG00000036384) #28 MMP27 (ENSRBIG00000039707) #29 MMP20 (ENSRBIG00000033578) #30 MMP7 (ENSRBIG00000036156) #31 TMEM123 (ENSRBIG00000002017) #32 BIRC2 (ENSRBIG00000029682) #35 BIRC3 (ENSRBIG00000017780) #36 YAP1 (ENSRBIG00000036436) #37 CFAP300 (ENSRBIG00000043051) Hominoidea ANCESTRAL SPECIES 1 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.a #16 ENSGT00940000159114.a.b #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000171202 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Hominidae ANCESTRAL SPECIES 1 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.b #16 ENSGT00940000159114.a.a #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000171202 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Homo/Pan/Gorilla group ANCESTRAL SPECIES 8 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114.a.a #16 ENSGT00940000164349 ENSGT00940000159114.a.b #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000171202 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114.a.a #16 ENSGT00940000164349 ENSGT00940000159114.a.b #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000171202 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Pan ANCESTRAL SPECIES 1 ENSGT00390000004524.c.a.a.a.a.a.a ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114.a.a #16 ENSGT00940000159114.a.b #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000171202 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 Chimpanzee MODERN SPECIES 2 CWF19L2 (ENSPTRG00000004239) #9 ENSPTRG00000045119 GUCY1A2 (ENSPTRG00000004238) #10 AASDHPPT (ENSPTRG00000004236) #11 KBTBD3 (ENSPTRG00000004235) #12 MSANTD4 (ENSPTRG00000004234) #13 GRIA4 (ENSPTRG00000004233) #14 ENSPTRG00000004231 #16 ENSPTRG00000052161 #16 CASP1 (ENSPTRG00000048268) #16 CASP5 (ENSPTRG00000004230) #17 CASP4 (ENSPTRG00000023646) #17 CASP12 (ENSPTRG00000028413) #18 PDGFD (ENSPTRG00000004227) #20 DYNC2H1 (ENSPTRG00000004224) #21 DCUN1D5 (ENSPTRG00000004223) #22 MMP13 (ENSPTRG00000004222) #23 MMP12 (ENSPTRG00000048755) #24 MMP3 (ENSPTRG00000004220) #25 ENSPTRG00000043621 MMP1 (ENSPTRG00000023318) #26 MMP10 (ENSPTRG00000004219) #27 MMP8 (ENSPTRG00000004218) #28 MMP27 (ENSPTRG00000004217) #29 MMP20 (ENSPTRG00000004216) #30 MMP7 (ENSPTRG00000004215) #31 TMEM123 (ENSPTRG00000022738) #32 BIRC2 (ENSPTRG00000004213) #35 BIRC3 (ENSPTRG00000004212) #36 YAP1 (ENSPTRG00000004211) #37 CFAP300 (ENSPTRG00000004210) Bonobo MODERN SPECIES 2 CWF19L2 (ENSPPAG00000023443) #9 ENSPPAG00000037738 ENSPPAG00000043185 #10 AASDHPPT (ENSPPAG00000030173) #11 KBTBD3 (ENSPPAG00000043957) #12 MSANTD4 (ENSPPAG00000043080) #13 GRIA4 (ENSPPAG00000026718) #14 ENSPPAG00000035963 #16 CARD16 (ENSPPAG00000042935) #16 CASP1 (ENSPPAG00000030163) #16 CASP4 (ENSPPAG00000042390) #17 CASP12 (ENSPPAG00000039543) #18 DDI1 (ENSPPAG00000020620) #19 PDGFD (ENSPPAG00000033732) #20 DYNC2H1 (ENSPPAG00000040117) #21 DCUN1D5 (ENSPPAG00000030025) #22 MMP13 (ENSPPAG00000028323) #23 MMP12 (ENSPPAG00000007778) #24 MMP3 (ENSPPAG00000036174) #25 ENSPPAG00000031769 MMP1 (ENSPPAG00000040747) #26 MMP10 (ENSPPAG00000019189) #27 MMP8 (ENSPPAG00000029244) #28 MMP27 (ENSPPAG00000030100) #29 MMP20 (ENSPPAG00000007692) #30 MMP7 (ENSPPAG00000033482) #31 TMEM123 (ENSPPAG00000040642) #32 BIRC2 (ENSPPAG00000004061) #35 BIRC3 (ENSPPAG00000029649) #36 YAP1 (ENSPPAG00000042951) #37 CFAP300 (ENSPPAG00000038653) Human MODERN SPECIES 2 CWF19L2 (ENSG00000152404) #9 GUCY1A2 (ENSG00000152402) #10 AASDHPPT (ENSG00000149313) #11 KBTBD3 (ENSG00000182359) #12 MSANTD4 (ENSG00000170903) #13 GRIA4 (ENSG00000152578) #14 CARD18 (ENSG00000255501) CARD16 (ENSG00000204397) #16 CASP1 (ENSG00000137752) #16 CASP5 (ENSG00000137757) #17 CASP4 (ENSG00000196954) #17 CASP12 (ENSG00000204403) #18 DDI1 (ENSG00000170967) #19 PDGFD (ENSG00000170962) #20 DYNC2H1 (ENSG00000187240) #21 DCUN1D5 (ENSG00000137692) #22 MMP13 (ENSG00000137745) #23 MMP12 (ENSG00000262406) #24 MMP3 (ENSG00000149968) #25 MMP1 (ENSG00000196611) #26 MMP10 (ENSG00000166670) #27 MMP8 (ENSG00000118113) #28 MMP27 (ENSG00000137675) #29 MMP20 (ENSG00000137674) #30 MMP7 (ENSG00000137673) #31 TMEM123 (ENSG00000152558) #32 BIRC2 (ENSG00000110330) #35 BIRC3 (ENSG00000023445) #36 YAP1 (ENSG00000137693) #37 CFAP300 (ENSG00000137691) CEP126 (ENSG00000110318) Gorilla MODERN SPECIES 2 GUCY1A2 (ENSGGOG00000009726) #10 ENSGGOG00000039147 #11 KBTBD3 (ENSGGOG00000003966) #12 MSANTD4 (ENSGGOG00000009947) #13 GRIA4 (ENSGGOG00000017011) #14 CARD18 (ENSGGOG00000003113) ENSGGOG00000038864 #16 ENSGGOG00000002144 #16 CASP1 (ENSGGOG00000023820) #16 CASP5 (ENSGGOG00000015759) #17 CASP4 (ENSGGOG00000023145) #17 CASP12 (ENSGGOG00000012075) #18 DDI1 (ENSGGOG00000012736) #19 PDGFD (ENSGGOG00000002102) #20 DYNC2H1 (ENSGGOG00000012522) #21 DCUN1D5 (ENSGGOG00000028011) #22 MMP13 (ENSGGOG00000003490) #23 MMP12 (ENSGGOG00000015496) #24 MMP3 (ENSGGOG00000010315) #25 ENSGGOG00000037629 MMP1 (ENSGGOG00000008869) #26 MMP10 (ENSGGOG00000026738) #27 MMP8 (ENSGGOG00000008722) #28 MMP27 (ENSGGOG00000008717) #29 MMP20 (ENSGGOG00000003314) #30 ENSGGOG00000015908 #31 TMEM123 (ENSGGOG00000008331) #32 BIRC2 (ENSGGOG00000008327) #35 BIRC3 (ENSGGOG00000005827) #36 ENSGGOG00000005796 #37 CFAP300 (ENSGGOG00000000989) Orangutan MODERN SPECIES 2 AASDHPPT (ENSPPYG00000003831) #11 KBTBD3 (ENSPPYG00000032968) #12 MSANTD4 (ENSPPYG00000003829) #13 GRIA4 (ENSPPYG00000003828) #14 CARD18 (ENSPPYG00000003827) ENSPPYG00000034995 #16 ENSPPYG00000039362 #16 ENSPPYG00000037088 #16 CASP1 (ENSPPYG00000003826) #16 CASP5 (ENSPPYG00000003825) #17 CASP4 (ENSPPYG00000003824) #17 ENSPPYG00000003823 #18 DDI1 (ENSPPYG00000003822) #19 PDGFD (ENSPPYG00000003821) #20 DYNC2H1 (ENSPPYG00000003819) #21 DCUN1D5 (ENSPPYG00000003816) #22 MMP13 (ENSPPYG00000003815) #23 MMP12 (ENSPPYG00000034070) #24 MMP3 (ENSPPYG00000003814) #25 MMP1 (ENSPPYG00000003813) #26 MMP10 (ENSPPYG00000032892) #27 ENSPPYG00000033588 MMP8 (ENSPPYG00000003812) #28 MMP27 (ENSPPYG00000037566) #29 MMP20 (ENSPPYG00000003811) #30 MMP7 (ENSPPYG00000003810) #31 TMEM123 (ENSPPYG00000003809) #32 BIRC2 (ENSPPYG00000003808) #35 BIRC3 (ENSPPYG00000034604) #36 YAP1 (ENSPPYG00000003806) #37 ENSPPYG00000003805 Gibbon MODERN SPECIES 5 CWF19L2 (ENSNLEG00000007213) #9 ENSNLEG00000034019 ENSNLEG00000027810 ENSNLEG00000007212 #10 AASDHPPT (ENSNLEG00000007211) #11 KBTBD3 (ENSNLEG00000007209) #12 MSANTD4 (ENSNLEG00000007207) #13 GRIA4 (ENSNLEG00000007202) #14 CASP1 (ENSNLEG00000007200) #16 CASP5 (ENSNLEG00000007197) #17 CASP4 (ENSNLEG00000007194) #17 ENSNLEG00000027825 PDGFD (ENSNLEG00000027133) #20 DDI1 (ENSNLEG00000019234) #19 DYNC2H1 (ENSNLEG00000007190) #21 DCUN1D5 (ENSNLEG00000007189) #22 MMP13 (ENSNLEG00000007186) #23 MMP12 (ENSNLEG00000007183) #24 MMP3 (ENSNLEG00000007178) #25 MMP1 (ENSNLEG00000007171) #26 MMP10 (ENSNLEG00000007177) #27 ENSNLEG00000028184 #28 MMP27 (ENSNLEG00000007170) #29 MMP20 (ENSNLEG00000007169) #30 MMP7 (ENSNLEG00000007168) #31 TMEM123 (ENSNLEG00000007167) #32 BIRC2 (ENSNLEG00000031093) #35 BIRC3 (ENSNLEG00000007165) #36 ENSNLEG00000033031 YAP1 (ENSNLEG00000007164) #37 CFAP300 (ENSNLEG00000007163) Platyrrhini ANCESTRAL SPECIES 3 ENSGT00940000158563 #8 ENSGT00940000155627.a.a #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.b #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Mas night monkey MODERN SPECIES 278 ENSANAG00000009840 ENSANAG00000023856 ENSANAG00000036500 CARD18 (ENSANAG00000028356) CARD16 (ENSANAG00000028470) #16 CASP1 (ENSANAG00000032743) #16 CASP4 (ENSANAG00000027784) #17 PDGFD (ENSANAG00000023791) #20 DYNC2H1 (ENSANAG00000035967) #21 DCUN1D5 (ENSANAG00000034204) #22 MMP13 (ENSANAG00000020799) #23 MMP12 (ENSANAG00000022445) #24 ENSANAG00000004878 MMP1 (ENSANAG00000028859) #26 MMP3 (ENSANAG00000029899) #25 MMP8 (ENSANAG00000023440) #28 MMP27 (ENSANAG00000020509) #29 MMP20 (ENSANAG00000021702) #30 MMP7 (ENSANAG00000023347) #31 TMEM123 (ENSANAG00000029026) #32 BIRC2 (ENSANAG00000037030) #35 BIRC3 (ENSANAG00000035989) #36 ENSANAG00000022618 YAP1 (ENSANAG00000029463) #37 CFAP300 (ENSANAG00000023658) Cebidae ANCESTRAL SPECIES ENSGT00940000158563 #8 ENSGT00940000155627.a.a #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.b #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Marmoset MODERN SPECIES 2 AASDHPPT (ENSCJAG00000075247) #11 KBTBD3 (ENSCJAG00000043912) #12 MSANTD4 (ENSCJAG00000046964) #13 ENSCJAG00000073825 GRIA4 (ENSCJAG00000009874) #14 CARD18 (ENSCJAG00000021995) ENSCJAG00000038168 #16 ENSCJAG00000079451 #16 CASP1 (ENSCJAG00000009842) #16 ENSCJAG00000069635 #17 CASP4 (ENSCJAG00000009805) #17 DDI1 (ENSCJAG00000053103) #19 PDGFD (ENSCJAG00000009788) #20 ENSCJAG00000085591 DYNC2H1 (ENSCJAG00000009549) #21 DCUN1D5 (ENSCJAG00000009502) #22 MMP13 (ENSCJAG00000009477) #23 MMP12 (ENSCJAG00000009452) #24 MMP3 (ENSCJAG00000038052) #25 MMP1 (ENSCJAG00000014107) #26 MMP10 (ENSCJAG00000016298) #27 MMP8 (ENSCJAG00000003743) #28 MMP27 (ENSCJAG00000003769) #29 MMP20 (ENSCJAG00000003781) #30 MMP7 (ENSCJAG00000003793) #31 TMEM123 (ENSCJAG00000003801) #32 BIRC2 (ENSCJAG00000003804) #35 Cebidae_a ANCESTRAL SPECIES 22 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627.a.a #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000164349 ENSGT00940000159114.a.b #16 ENSGT00940000159114.b #16 ENSGT00940000161497.g #17 ENSGT00940000161497.h #17 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 50 ALKBH8 (ENSSBOG00000031504) #8 CWF19L2 (ENSSBOG00000033647) #9 GUCY1A2 (ENSSBOG00000020105) #10 AASDHPPT (ENSSBOG00000014423) #11 KBTBD3 (ENSSBOG00000024589) #12 MSANTD4 (ENSSBOG00000031639) #13 GRIA4 (ENSSBOG00000025256) #14 ENSSBOG00000022920 CARD18 (ENSSBOG00000032567) CASP1 (ENSSBOG00000021781) #16 ENSSBOG00000028391 #16 CASP5 (ENSSBOG00000030105) #17 CASP4 (ENSSBOG00000023437) #17 PDGFD (ENSSBOG00000027472) #20 DYNC2H1 (ENSSBOG00000032663) #21 ENSSBOG00000033947 #22 MMP13 (ENSSBOG00000035950) #23 MMP12 (ENSSBOG00000028385) #24 MMP3 (ENSSBOG00000033146) #25 MMP1 (ENSSBOG00000034105) #26 MMP10 (ENSSBOG00000029788) #27 MMP8 (ENSSBOG00000031477) #28 MMP27 (ENSSBOG00000003176) #29 MMP20 (ENSSBOG00000023588) #30 MMP7 (ENSSBOG00000026550) #31 ENSSBOG00000029913 #32 BIRC2 (ENSSBOG00000034069) #35 BIRC3 (ENSSBOG00000031187) #36 YAP1 (ENSSBOG00000027497) #37 ENSSBOG00000036077 CFAP300 (ENSSBOG00000033758) Bolivian squirrel monkey MODERN SPECIES 86 RSKR (ENSSBOG00000034431) SPAG5 (ENSSBOG00000010736) ALDOC (ENSSBOG00000026322) PIGS (ENSSBOG00000022659) UNC119 (ENSSBOG00000029695) FOXN1 (ENSSBOG00000021455) SLC13A2 (ENSSBOG00000036187) SLC46A1 (ENSSBOG00000032813) SARM1 (ENSSBOG00000020354) VTN (ENSSBOG00000021835) TMEM199 (ENSSBOG00000028946) POLDIP2 (ENSSBOG00000021828) TNFAIP1 (ENSSBOG00000031797) IFT20 (ENSSBOG00000029622) TMEM97 (ENSSBOG00000022614) ENSSBOG00000013177 #22 NLK (ENSSBOG00000013125) LYRM9 (ENSSBOG00000008936) NOS2 (ENSSBOG00000030327) ENSSBOG00000025381 ENSSBOG00000034035 KSR1 (ENSSBOG00000035517) ENSSBOG00000035593 WSB1 (ENSSBOG00000032692) PELP1 (ENSSBOG00000023118) ARRB2 (ENSSBOG00000024166) MED11 (ENSSBOG00000035985) CXCL16 (ENSSBOG00000023565) ZMYND15 (ENSSBOG00000024955) ENSSBOG00000021685 TM4SF5 (ENSSBOG00000025439) Capuchin MODERN SPECIES 171 AASDHPPT (ENSCCAG00000024359) #11 KBTBD3 (ENSCCAG00000016315) #12 MSANTD4 (ENSCCAG00000033896) #13 GRIA4 (ENSCCAG00000021010) #14 ENSCCAG00000028762 CARD18 (ENSCCAG00000032639) ENSCCAG00000023890 #16 CASP1 (ENSCCAG00000024150) #16 CASP4 (ENSCCAG00000025091) #17 PDGFD (ENSCCAG00000033710) #20 DYNC2H1 (ENSCCAG00000032776) #21 DCUN1D5 (ENSCCAG00000036060) #22 MMP13 (ENSCCAG00000001423) #23 MMP12 (ENSCCAG00000034212) #24 MMP3 (ENSCCAG00000029156) #25 MMP1 (ENSCCAG00000021222) #26 MMP10 (ENSCCAG00000036577) #27 MMP8 (ENSCCAG00000032628) #28 MMP27 (ENSCCAG00000034842) #29 MMP20 (ENSCCAG00000023652) #30 MMP7 (ENSCCAG00000021369) #31 ENSCCAG00000028209 ENSCCAG00000015782 ENSCCAG00000026170 ENSCCAG00000017186 TMEM123 (ENSCCAG00000021231) #32 BIRC2 (ENSCCAG00000029945) #35 Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT00390000008536 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000162428.b #15 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Tree shrew MODERN SPECIES 1791 ENSTBEG00000011130 #21 DCUN1D5 (ENSTBEG00000010532) #22 MMP13 (ENSTBEG00000009968) #23 MMP12 (ENSTBEG00000009604) #24 MMP3 (ENSTBEG00000017424) #25 MMP1 (ENSTBEG00000017080) #26 MMP10 (ENSTBEG00000016136) #27 MMP8 (ENSTBEG00000015520) #28 MMP27 (ENSTBEG00000015035) #29 MMP20 (ENSTBEG00000014473) #30 Glires ANCESTRAL SPECIES 1 ENSGT00390000008536 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000162428.b #15 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Lagomorpha ANCESTRAL SPECIES 5 ENSGT00940000156648 ENSGT00940000159933 ENSGT00390000015655.a ENSGT00940000159782 ENSGT00390000008536 ENSGT00940000158563 #8 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000162428.b #15 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a Pika MODERN SPECIES 2838 ENSOPRG00000016082 #21 ENSOPRG00000010701 #21 ENSOPRG00000018732 #21 ENSOPRG00000007743 #22 Rabbit MODERN SPECIES CWF19L2 (ENSOCUG00000025398) #9 ENSOCUG00000038405 GUCY1A2 (ENSOCUG00000004490) #10 ENSOCUG00000036599 ENSOCUG00000023190 AASDHPPT (ENSOCUG00000000231) #11 KBTBD3 (ENSOCUG00000000230) #12 MSANTD4 (ENSOCUG00000022457) #13 GRIA4 (ENSOCUG00000001089) #14 ENSOCUG00000029247 #15 ENSOCUG00000001103 #16 ENSOCUG00000007503 #17 PDGFD (ENSOCUG00000015312) #20 DDI1 (ENSOCUG00000015321) #19 DYNC2H1 (ENSOCUG00000016257) #21 DCUN1D5 (ENSOCUG00000006512) #22 MMP13 (ENSOCUG00000002481) #23 ENSOCUG00000029729 ENSOCUG00000011333 MMP12 (ENSOCUG00000008303) #24 MMP3 (ENSOCUG00000029337) #25 MMP1 (ENSOCUG00000017958) #26 MMP10 (ENSOCUG00000021775) #27 MMP8 (ENSOCUG00000001092) #28 MMP27 (ENSOCUG00000001090) #29 MMP20 (ENSOCUG00000002930) #30 MMP7 (ENSOCUG00000015329) #31 ENSOCUG00000006165 #32 BIRC2 (ENSOCUG00000013890) #35 BIRC3 (ENSOCUG00000010109) #36 ENSOCUG00000034499 Rodentia ANCESTRAL SPECIES 1 ENSGT01100000263709 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Rodentia_B ANCESTRAL SPECIES 23 ENSGT01100000263709 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162428.b #15 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Kangaroo rat MODERN SPECIES 329 Slc35f2 (ENSDORG00000016340) Sln (ENSDORG00000026414) Elmod1 (ENSDORG00000008597) Alkbh8 (ENSDORG00000008596) #8 ENSDORG00000008595 #9 Gucy1a2 (ENSDORG00000007568) #10 Aasdhppt (ENSDORG00000012684) #11 Kbtbd3 (ENSDORG00000012680) #12 Msantd4 (ENSDORG00000023419) #13 ENSDORG00000023554 #14 Casp1 (ENSDORG00000016257) #16 Casp4 (ENSDORG00000016256) #15 Ddi1 (ENSDORG00000002404) #19 Pdgfd (ENSDORG00000014006) #20 Dync2h1 (ENSDORG00000010115) #21 Dcun1d5 (ENSDORG00000001635) #22 Or8b8 (ENSDORG00000027079) ENSDORG00000024038 ENSDORG00000027629 ENSDORG00000027698 ENSDORG00000024857 ENSDORG00000027724 Panx3 (ENSDORG00000002966) Tbrg1 (ENSDORG00000002733) Siae (ENSDORG00000002735) Spa17 (ENSDORG00000023533) Nrgn (ENSDORG00000002739) Vsig2 (ENSDORG00000002740) Esam (ENSDORG00000028051) Msantd2 (ENSDORG00000002743) Robo3 (ENSDORG00000010665) Myomorpha ANCESTRAL SPECIES 23 ENSGT01100000263709 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162428.b #15 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Lesser Egyptian jerboa MODERN SPECIES 87 Pdgfd (ENSJJAG00000020441) #20 Ddi1 (ENSJJAG00000000750) #19 ENSJJAG00000016889 Dync2h1 (ENSJJAG00000000557) #21 Dcun1d5 (ENSJJAG00000004999) #22 Mmp13 (ENSJJAG00000013818) #23 Mmp12 (ENSJJAG00000019762) #24 ENSJJAG00000010013 #26 ENSJJAG00000020496 #27 Mmp8 (ENSJJAG00000021566) #28 Mmp27 (ENSJJAG00000011497) #29 Mmp20 (ENSJJAG00000020407) #30 Mmp7 (ENSJJAG00000009326) #31 Tmem123 (ENSJJAG00000014178) #32 ENSJJAG00000017306 #35 ENSJJAG00000021580 #36 ENSJJAG00000010414 #37 ENSJJAG00000015982 Cfap300 (ENSJJAG00000022122) Cep126 (ENSJJAG00000014011) Muroidea ANCESTRAL SPECIES 29 ENSGT01100000263709 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162428.b #15 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Upper Galilee mountains blind mole rat MODERN SPECIES 401 Pdgfd (ENSNGAG00000016717) #20 Dync2h1 (ENSNGAG00000000125) #21 Dcun1d5 (ENSNGAG00000013687) #22 Mmp13 (ENSNGAG00000013401) #23 Mmp12 (ENSNGAG00000012323) #24 Mmp3 (ENSNGAG00000008287) #25 ENSNGAG00000012427 #26 ENSNGAG00000011580 #27 Mmp8 (ENSNGAG00000009311) #28 Mmp27 (ENSNGAG00000001467) #29 Mmp20 (ENSNGAG00000001298) #30 Mmp7 (ENSNGAG00000000983) #31 ENSNGAG00000000138 #32 Birc2 (ENSNGAG00000011071) #35 Muroidea_A ANCESTRAL SPECIES 23 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162428.b #15 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Cricetidae ANCESTRAL SPECIES 4 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759.h #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Cricetidae_B ANCESTRAL SPECIES 58 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759.h #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Prairie vole MODERN SPECIES 13 Gria4 (ENSMOCG00000011931) #14 ENSMOCG00000004515 Casp1 (ENSMOCG00000019444) #16 Pdgfd (ENSMOCG00000014518) #20 Dync2h1 (ENSMOCG00000017521) #21 Dcun1d5 (ENSMOCG00000008925) #22 Mmp13 (ENSMOCG00000010248) #23 Mmp12 (ENSMOCG00000020347) #24 Mmp3 (ENSMOCG00000006156) #25 ENSMOCG00000023030 #26 ENSMOCG00000007239 #27 Mmp8 (ENSMOCG00000009399) #28 Mmp27 (ENSMOCG00000018511) #29 Mmp20 (ENSMOCG00000019578) #30 Mmp7 (ENSMOCG00000021222) #31 Tmem123 (ENSMOCG00000021990) #32 Birc2 (ENSMOCG00000010117) #35 Birc3 (ENSMOCG00000013964) #36 Yap1 (ENSMOCG00000007486) #37 Cfap300 (ENSMOCG00000013197) Cep126 (ENSMOCG00000013353) Northern American deer mouse MODERN SPECIES 20 Gucy1a2 (ENSPEMG00000021986) #10 ENSPEMG00000025699 Aasdhppt (ENSPEMG00000016551) #11 Kbtbd3 (ENSPEMG00000029070) #12 Msantd4 (ENSPEMG00000029468) #13 Gria4 (ENSPEMG00000005300) #14 ENSPEMG00000025774 ENSPEMG00000025268 ENSPEMG00000026130 #16 ENSPEMG00000008389 #16 Casp12 (ENSPEMG00000022171) #18 ENSPEMG00000021102 ENSPEMG00000028818 Pdgfd (ENSPEMG00000013246) #20 Dync2h1 (ENSPEMG00000016383) #21 Dcun1d5 (ENSPEMG00000020877) #22 Mmp13 (ENSPEMG00000011633) #23 Mmp12 (ENSPEMG00000020371) #24 Mmp3 (ENSPEMG00000020327) #25 ENSPEMG00000020690 #26 Mmp10 (ENSPEMG00000021262) #25 Mmp8 (ENSPEMG00000022864) #28 Mmp27 (ENSPEMG00000024216) #29 Mmp20 (ENSPEMG00000011175) #30 Mmp7 (ENSPEMG00000021337) #31 Tmem123 (ENSPEMG00000023085) #32 Birc2 (ENSPEMG00000018476) #35 Birc3 (ENSPEMG00000020508) #36 Yap1 (ENSPEMG00000022927) #37 Cfap300 (ENSPEMG00000021710) Cep126 (ENSPEMG00000020512) Cricetinae ANCESTRAL SPECIES 45 ENSGT00940000159308 ENSGT00940000156079 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759.h #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a ENSGT00940000159713 Golden Hamster MODERN SPECIES 688 ENSMAUG00000012374 ENSMAUG00000007695 Or7g32 (ENSMAUG00000009330) Or7g30 (ENSMAUG00000010230) Or7g16 (ENSMAUG00000000891) ENSMAUG00000008207 Gucy1a2 (ENSMAUG00000011689) #10 ENSMAUG00000008521 #11 Kbtbd3 (ENSMAUG00000009346) #12 Msantd4 (ENSMAUG00000009891) #13 ENSMAUG00000016775 #14 Casp1 (ENSMAUG00000010193) #16 Ddi1 (ENSMAUG00000016614) #19 Pdgfd (ENSMAUG00000012917) #20 Dync2h1 (ENSMAUG00000015798) #21 Dcun1d5 (ENSMAUG00000011071) #22 Mmp13 (ENSMAUG00000001270) #23 Mmp12 (ENSMAUG00000008249) #24 Mmp3 (ENSMAUG00000011335) #25 ENSMAUG00000009988 #26 Mmp27 (ENSMAUG00000000778) #29 Mmp20 (ENSMAUG00000011367) #30 ENSMAUG00000016756 #25 Birc2 (ENSMAUG00000018063) #35 Cfap300 (ENSMAUG00000011879) Cep126 (ENSMAUG00000013444) Trpc6 (ENSMAUG00000014533) Pgr (ENSMAUG00000019127) Arhgap42 (ENSMAUG00000012529) Cntn5 (ENSMAUG00000012675) Jrkl (ENSMAUG00000016872) Chinese hamster chok1gshd MODERN SPECIES 202 Col22a1 (ENSCGRG00001011324) Fam135b (ENSCGRG00001009898) Alkbh8 (ENSCGRG00001011248) #8 Cwf19l2 (ENSCGRG00001010585) #9 Gucy1a2 (ENSCGRG00001016426) #10 ENSCGRG00001018331 #11 Kbtbd3 (ENSCGRG00001018771) #12 Msantd4 (ENSCGRG00001019387) #13 Gria4 (ENSCGRG00001016770) #14 Casp1 (ENSCGRG00001009135) #16 Casp12 (ENSCGRG00001018352) #18 ENSCGRG00001004505 Pdgfd (ENSCGRG00001019661) #20 Ddi1 (ENSCGRG00001005855) #19 Dync2h1 (ENSCGRG00001013236) #21 Dcun1d5 (ENSCGRG00001014535) #22 Mmp13 (ENSCGRG00001006492) #23 Mmp12 (ENSCGRG00001013053) #24 Mmp3 (ENSCGRG00001015501) #25 ENSCGRG00001009381 ENSCGRG00001020530 #26 ENSCGRG00001014094 #27 Mmp8 (ENSCGRG00001015038) #28 Mmp27 (ENSCGRG00001021757) #29 Mmp20 (ENSCGRG00001000330) #30 ENSCGRG00001015482 #23 Tmem123 (ENSCGRG00001018797) #32 ENSCGRG00001022513 Birc2 (ENSCGRG00001023266) #35 Birc3 (ENSCGRG00001008505) #36 Yap1 (ENSCGRG00001011573) #37 Murinae ANCESTRAL SPECIES 3 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162428.b #15 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000154907.b.n #26 ENSGT00940000154907.b.m #26 ENSGT00940000159759 #25 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Rat MODERN SPECIES 18 AABR07068905.1 (ENSRNOG00000062096) ENSRNOG00000066855 Aasdhppt (ENSRNOG00000005795) #11 Kbtbd3 (ENSRNOG00000069206) #12 Msantd4 (ENSRNOG00000022245) #13 Gria4 (ENSRNOG00000006957) #14 Casp1 (ENSRNOG00000007372) #16 Casp4 (ENSRNOG00000033697) #15 Casp12 (ENSRNOG00000033434) #18 ENSRNOG00000069423 ENSRNOG00000066836 Pdgfd (ENSRNOG00000029148) #20 ENSRNOG00000065876 Ddi1 (ENSRNOG00000022081) #19 Dync2h1 (ENSRNOG00000032070) #21 Dcun1d5 (ENSRNOG00000008390) #22 Mmp13 (ENSRNOG00000008478) #23 Mmp12 (ENSRNOG00000030187) #24 Mmp1b (ENSRNOG00000008881) #26 Mmp3 (ENSRNOG00000032626) #25 Mmp1 (ENSRNOG00000032353) #26 Mmp10 (ENSRNOG00000032832) #25 Mmp8 (ENSRNOG00000009907) #28 Mmp27 (ENSRNOG00000040208) #29 Mmp20 (ENSRNOG00000021896) #30 Mmp7 (ENSRNOG00000010507) #31 Tmem123 (ENSRNOG00000010584) #32 Birc2 (ENSRNOG00000010602) #35 Birc3 (ENSRNOG00000005731) #36 Yap1 (ENSRNOG00000005933) #37 Cfap300 (ENSRNOG00000043410) Mus ANCESTRAL SPECIES 4 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162428.b #15 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000154907.b.n #26 ENSGT00940000154907.b.m #26 ENSGT00940000159759 #25 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Shrew mouse MODERN SPECIES 1 Alkbh8 (MGP_PahariEiJ_G0014615) #8 Cwf19l2 (MGP_PahariEiJ_G0014616) #9 Gucy1a2 (MGP_PahariEiJ_G0014617) #10 Aasdhppt (MGP_PahariEiJ_G0014618) #11 Kbtbd3 (MGP_PahariEiJ_G0014619) #12 Msantd4 (MGP_PahariEiJ_G0014620) #13 Gria4 (MGP_PahariEiJ_G0014621) #14 Casp1 (MGP_PahariEiJ_G0014622) #16 Casp4 (MGP_PahariEiJ_G0014623) #15 MGP_PahariEiJ_G0014624 #18 Pdgfd (MGP_PahariEiJ_G0014625) #20 Ddi1 (MGP_PahariEiJ_G0014626) #19 Dync2h1 (MGP_PahariEiJ_G0014627) #21 MGP_PahariEiJ_G0014628 #22 Mmp13 (MGP_PahariEiJ_G0014629) #23 Mmp12 (MGP_PahariEiJ_G0014630) #24 Mmp1b (MGP_PahariEiJ_G0014631) #26 Mmp3 (MGP_PahariEiJ_G0014632) #25 Mmp10 (MGP_PahariEiJ_G0014633) #25 Mmp8 (MGP_PahariEiJ_G0014634) #28 Mmp27 (MGP_PahariEiJ_G0014635) #29 Mmp20 (MGP_PahariEiJ_G0014636) #30 Mmp7 (MGP_PahariEiJ_G0014637) #31 Tmem123 (MGP_PahariEiJ_G0014638) #32 MGP_PahariEiJ_G0014639 Birc3 (MGP_PahariEiJ_G0014640) #36 Yap1 (MGP_PahariEiJ_G0014641) #37 Cfap300 (MGP_PahariEiJ_G0014642) Cep126 (MGP_PahariEiJ_G0014643) Mus_A ANCESTRAL SPECIES 4 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162428.b #15 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000154907.b.n #26 ENSGT00940000154907.b.m #26 ENSGT00940000159759 #25 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Ryukyu mouse MODERN SPECIES 18 Cwf19l2 (MGP_CAROLIEiJ_G0031737) #9 Gucy1a2 (MGP_CAROLIEiJ_G0031738) #10 Aasdhppt (MGP_CAROLIEiJ_G0031739) #11 Kbtbd3 (MGP_CAROLIEiJ_G0031740) #12 Msantd4 (MGP_CAROLIEiJ_G0031741) #13 Gria4 (MGP_CAROLIEiJ_G0031742) #14 Casp1 (MGP_CAROLIEiJ_G0031743) #16 Casp4 (MGP_CAROLIEiJ_G0031744) #15 Casp12 (MGP_CAROLIEiJ_G0031745) #18 Pdgfd (MGP_CAROLIEiJ_G0031746) #20 Ddi1 (MGP_CAROLIEiJ_G0031747) #19 Dync2h1 (MGP_CAROLIEiJ_G0031748) #21 MGP_CAROLIEiJ_G0031749 #22 Mmp13 (MGP_CAROLIEiJ_G0031750) #23 Mmp12 (MGP_CAROLIEiJ_G0031751) #24 Mmp3 (MGP_CAROLIEiJ_G0031752) #25 Mmp1b (MGP_CAROLIEiJ_G0031753) #26 Mmp1a (MGP_CAROLIEiJ_G0031754) #26 Mmp10 (MGP_CAROLIEiJ_G0031755) #25 Mmp8 (MGP_CAROLIEiJ_G0031756) #28 Mmp27 (MGP_CAROLIEiJ_G0031757) #29 Mmp20 (MGP_CAROLIEiJ_G0031758) #30 Mmp7 (MGP_CAROLIEiJ_G0031759) #31 Tmem123 (MGP_CAROLIEiJ_G0031760) #32 MGP_CAROLIEiJ_G0031761 #33 MGP_CAROLIEiJ_G0031762 #36 Yap1 (MGP_CAROLIEiJ_G0031763) #37 Cfap300 (MGP_CAROLIEiJ_G0031764) Mus_B ANCESTRAL SPECIES 3 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162428.b #15 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000154907.b.n #26 ENSGT00940000154907.b.m #26 ENSGT00940000159759 #25 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Mouse MODERN SPECIES 18 Alkbh8 (ENSMUSG00000025899) #8 Cwf19l2 (ENSMUSG00000025898) #9 Gucy1a2 (ENSMUSG00000041624) #10 Aasdhppt (ENSMUSG00000025894) #11 Kbtbd3 (ENSMUSG00000025893) #12 Msantd4 (ENSMUSG00000041124) #13 Gria4 (ENSMUSG00000025892) #14 Casp1 (ENSMUSG00000025888) #16 Casp4 (ENSMUSG00000033538) #15 Casp12 (ENSMUSG00000025887) #18 Pdgfd (ENSMUSG00000032006) #20 Ddi1 (ENSMUSG00000047619) #19 Dync2h1 (ENSMUSG00000047193) #21 Dcun1d5 (ENSMUSG00000032002) #22 Mmp13 (ENSMUSG00000050578) #23 Mmp12 (ENSMUSG00000049723) #24 Mmp1b (ENSMUSG00000041620) #26 Mmp3 (ENSMUSG00000043613) #25 Mmp1a (ENSMUSG00000043089) #26 Mmp10 (ENSMUSG00000047562) #25 Mmp8 (ENSMUSG00000005800) #28 Mmp27 (ENSMUSG00000070323) #29 Mmp20 (ENSMUSG00000018620) #30 Mmp7 (ENSMUSG00000018623) #31 Tmem123 (ENSMUSG00000050912) #32 Birc2 (ENSMUSG00000057367) #35 Birc3 (ENSMUSG00000032000) #36 Yap1 (ENSMUSG00000053110) #37 Cfap300 (ENSMUSG00000053070) Mus_C ANCESTRAL SPECIES 8 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162428.b #15 ENSGT00940000162555 #18 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000154907.b.n #26 ENSGT00940000154907.b.m #26 ENSGT00940000159759 #25 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 spretus MODERN SPECIES 18 Alkbh8 (MGP_SPRETEiJ_G0032856) #8 Cwf19l2 (MGP_SPRETEiJ_G0032857) #9 Gucy1a2 (MGP_SPRETEiJ_G0032858) #10 Aasdhppt (MGP_SPRETEiJ_G0032859) #11 Kbtbd3 (MGP_SPRETEiJ_G0032860) #12 Msantd4 (MGP_SPRETEiJ_G0032861) #13 Gria4 (MGP_SPRETEiJ_G0032862) #14 Casp1 (MGP_SPRETEiJ_G0032863) #16 Casp4 (MGP_SPRETEiJ_G0032864) #15 Casp12 (MGP_SPRETEiJ_G0032865) #18 Pdgfd (MGP_SPRETEiJ_G0032866) #20 Ddi1 (MGP_SPRETEiJ_G0032867) #19 Dync2h1 (MGP_SPRETEiJ_G0032868) #21 MGP_SPRETEiJ_G0032869 #22 Mmp13 (MGP_SPRETEiJ_G0032870) #23 Mmp12 (MGP_SPRETEiJ_G0032871) #24 MGP_SPRETEiJ_G0032872 #25 MGP_SPRETEiJ_G0032873 #26 MGP_SPRETEiJ_G0032874 #26 MGP_SPRETEiJ_G0032875 #25 Mmp8 (MGP_SPRETEiJ_G0032876) #28 Mmp27 (MGP_SPRETEiJ_G0032877) #29 Mmp20 (MGP_SPRETEiJ_G0032878) #30 Mmp7 (MGP_SPRETEiJ_G0032879) #31 Tmem123 (MGP_SPRETEiJ_G0032880) #32 MGP_SPRETEiJ_G0032881 #35 Birc3 (MGP_SPRETEiJ_G0032882) #36 Yap1 (MGP_SPRETEiJ_G0032883) #37 Cfap300 (MGP_SPRETEiJ_G0032884) Steppe mouse MODERN SPECIES 3057 Ddi1 (ENSMSIG00000019916) #19 Pdgfd (ENSMSIG00000019889) #20 Dync2h1 (ENSMSIG00000018981) #21 Dcun1d5 (ENSMSIG00000018871) #22 Mmp13 (ENSMSIG00000018843) #23 ENSMSIG00000018840 Mmp12 (ENSMSIG00000018748) #24 Mmp1b (ENSMSIG00000018722) #26 Mmp3 (ENSMSIG00000018686) #25 Mmp1a (ENSMSIG00000018671) #26 Mmp10 (ENSMSIG00000018646) #25 Mmp8 (ENSMSIG00000018618) #28 Mmp27 (ENSMSIG00000018549) #29 Mmp20 (ENSMSIG00000018527) #30 Mmp7 (ENSMSIG00000018503) #31 Rodentia_A ANCESTRAL SPECIES 1 ENSGT01100000263709 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Sciuridae ANCESTRAL SPECIES 2 ENSGT00390000015655.a ENSGT01100000263709 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162428.b #15 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Marmotini ANCESTRAL SPECIES 20 ENSGT00390000015655.a ENSGT01100000263709 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162428.b #15 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b.e #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 Alpin marmot MODERN SPECIES 25 CWF19L2 (ENSMMMG00000001043) #9 ENSMMMG00000001082 #10 AASDHPPT (ENSMMMG00000001128) #11 KBTBD3 (ENSMMMG00000001143) #12 MSANTD4 (ENSMMMG00000001156) #13 GRIA4 (ENSMMMG00000001185) #14 ENSMMMG00000001339 ENSMMMG00000001357 #15 ENSMMMG00000001523 #16 ENSMMMG00000001554 #15 PDGFD (ENSMMMG00000001580) #20 DDI1 (ENSMMMG00000001629) #19 ENSMMMG00000001653 ENSMMMG00000001663 DYNC2H1 (ENSMMMG00000001718) #21 DCUN1D5 (ENSMMMG00000002318) #22 MMP13 (ENSMMMG00000002337) #23 MMP12 (ENSMMMG00000002359) #24 MMP3 (ENSMMMG00000002377) #25 MMP1 (ENSMMMG00000002402) #26 ENSMMMG00000002452 #25 MMP8 (ENSMMMG00000002471) #28 MMP27 (ENSMMMG00000002490) #29 MMP20 (ENSMMMG00000002519) #30 MMP7 (ENSMMMG00000002551) #31 TMEM123 (ENSMMMG00000002579) #32 ENSMMMG00000002595 #35 BIRC3 (ENSMMMG00000002693) #36 YAP1 (ENSMMMG00000002718) #37 CFAP300 (ENSMMMG00000002751) CEP126 (ENSMMMG00000002769) Marmotini_b ANCESTRAL SPECIES 122 ENSGT00390000015655.a ENSGT01100000263709 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000162428.b #15 ENSGT00940000159575 #20 ENSGT00950000182999.a.b #19 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b.e #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 Squirrel MODERN SPECIES 151 ENSSTOG00000001241 ELMOD1 (ENSSTOG00000001237) ALKBH8 (ENSSTOG00000024939) #8 ENSSTOG00000033115 #9 ENSSTOG00000027350 GUCY1A2 (ENSSTOG00000013157) #10 AASDHPPT (ENSSTOG00000000268) #11 KBTBD3 (ENSSTOG00000001079) #12 MSANTD4 (ENSSTOG00000027044) #13 GRIA4 (ENSSTOG00000000265) #14 ENSSTOG00000007964 #16 ENSSTOG00000002855 #15 PDGFD (ENSSTOG00000004230) #20 DDI1 (ENSSTOG00000004248) #19 DYNC2H1 (ENSSTOG00000026849) #21 DCUN1D5 (ENSSTOG00000013580) #22 MMP13 (ENSSTOG00000008612) #23 MMP12 (ENSSTOG00000008600) #24 MMP3 (ENSSTOG00000008584) #25 MMP1 (ENSSTOG00000008571) #26 ENSSTOG00000008555 #25 MMP8 (ENSSTOG00000008539) #28 MMP27 (ENSSTOG00000008513) #29 MMP20 (ENSSTOG00000023437) #30 MMP7 (ENSSTOG00000027961) #31 TMEM123 (ENSSTOG00000032785) #32 ENSSTOG00000026499 ENSSTOG00000005754 #35 BIRC3 (ENSSTOG00000005734) #36 YAP1 (ENSSTOG00000004960) #37 CFAP300 (ENSSTOG00000011163) Arctic ground squirrel MODERN SPECIES 103 ENSUPAG00010020000 #15 ENSUPAG00010019990 #16 ENSUPAG00010019986 #15 DDI1 (ENSUPAG00010019982) #19 PDGFD (ENSUPAG00010019962) #20 DYNC2H1 (ENSUPAG00010019688) #21 DCUN1D5 (ENSUPAG00010019672) #22 MMP13 (ENSUPAG00010019662) #23 MMP12 (ENSUPAG00010019655) #24 MMP1 (ENSUPAG00010019633) #26 MMP3 (ENSUPAG00010019608) #25 MMP8 (ENSUPAG00010019593) #28 MMP27 (ENSUPAG00010019583) #29 MMP20 (ENSUPAG00010019573) #30 MMP7 (ENSUPAG00010019569) #31 TMEM123 (ENSUPAG00010019562) #32 BIRC2 (ENSUPAG00010019549) #35 BIRC3 (ENSUPAG00010019528) #36 YAP1 (ENSUPAG00010019515) #37 CFAP300 (ENSUPAG00010019501) CEP126 (ENSUPAG00010019487) ANGPTL5 (ENSUPAG00010019480) Eurasian red squirrel MODERN SPECIES 2 CWF19L2 (ENSSVLG00005020205) #9 GUCY1A2 (ENSSVLG00005020104) #10 ENSSVLG00005020058 AASDHPPT (ENSSVLG00005020020) #11 KBTBD3 (ENSSVLG00005019983) #12 MSANTD4 (ENSSVLG00005019923) #13 GRIA4 (ENSSVLG00005019563) #14 ENSSVLG00005019096 ENSSVLG00005018566 #16 ENSSVLG00005018358 #15 DDI1 (ENSSVLG00005018324) #19 PDGFD (ENSSVLG00005018195) #20 ENSSVLG00005018153 ENSSVLG00005018071 DYNC2H1 (ENSSVLG00005015721) #21 DCUN1D5 (ENSSVLG00005015275) #22 MMP13 (ENSSVLG00005015162) #23 MMP12 (ENSSVLG00005015038) #24 MMP3 (ENSSVLG00005014901) #25 MMP1 (ENSSVLG00005014774) #26 MMP10 (ENSSVLG00005014643) #27 MMP8 (ENSSVLG00005014523) #28 MMP27 (ENSSVLG00005014388) #29 MMP20 (ENSSVLG00005014300) #30 MMP7 (ENSSVLG00005014206) #31 TMEM123 (ENSSVLG00005014049) #32 BIRC2 (ENSSVLG00005013957) #35 BIRC3 (ENSSVLG00005013872) #36 YAP1 (ENSSVLG00005013738) #37 CFAP300 (ENSSVLG00005013383) CEP126 (ENSSVLG00005013261) Hystricomorpha ANCESTRAL SPECIES 5 ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 24 ENSHGLG00000015842 #11 KBTBD3 (ENSHGLG00000015784) #12 MSANTD4 (ENSHGLG00000015607) #13 GRIA4 (ENSHGLG00000007205) #14 ENSHGLG00000034907 ENSHGLG00000000196 #16 ENSHGLG00000000369 #17 ENSHGLG00000002557 #18 ENSHGLG00000002176 PDGFD (ENSHGLG00000050700) #20 DDI1 (ENSHGLG00000019795) #19 ENSHGLG00000001157 ENSHGLG00000026082 ENSHGLG00000001041 #21 ENSHGLG00000000377 ENSHGLG00000000439 #22 MMP13 (ENSHGLG00000000539) #23 ENSHGLG00000016013 ENSHGLG00000042652 MMP12 (ENSHGLG00000001493) #24 MMP3 (ENSHGLG00000001578) #25 MMP1 (ENSHGLG00000002821) #26 MMP10 (ENSHGLG00000003158) #27 MMP8 (ENSHGLG00000003235) #28 ENSHGLG00000003321 #29 ENSHGLG00000002861 ENSHGLG00000000253 PGR (ENSHGLG00000001843) TRPC6 (ENSHGLG00000000680) ENSHGLG00000000414 ANGPTL5 (ENSHGLG00000047251) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 31 BTK (ENSHGLG00000000626) GLA (ENSHGLG00000001617) HNRNPH2 (ENSHGLG00000001154) ENSHGLG00000043800 ARMCX4 (ENSHGLG00000009235) ARMCX1 (ENSHGLG00000002647) ENSHGLG00000011139 ARMCX6 (ENSHGLG00000047920) ARMCX3 (ENSHGLG00000041854) ARMCX2 (ENSHGLG00000019887) ENSHGLG00000044035 ENSHGLG00000000882 ENSHGLG00000017474 ENSHGLG00000000306 ENSHGLG00000037995 ENSHGLG00000000130 #22 ENSHGLG00000020229 ENSHGLG00000047471 PLP1 (ENSHGLG00000000492) ENSHGLG00000000582 TMEM31 (ENSHGLG00000040426) MORF4L2 (ENSHGLG00000000592) ENSHGLG00000039920 ENSHGLG00000033616 ENSHGLG00000000613 ENSHGLG00000037461 ENSHGLG00000033821 ENSHGLG00000033400 WBP5 (ENSHGLG00000035986) ENSHGLG00000000713 ENSHGLG00000000724 Naked mole-rat female MODERN SPECIES 6 ENSHGLG00000049099 ENSHGLG00000033028 ENSHGLG00000008937 ENSHGLG00000044690 SALL4 (ENSHGLG00000009043) ATP9A (ENSHGLG00000009412) ENSHGLG00000044936 NFATC2 (ENSHGLG00000010406) KCNG1 (ENSHGLG00000011040) MOCS3 (ENSHGLG00000020809) ENSHGLG00000011694 ADNP (ENSHGLG00000011922) ENSHGLG00000034848 PARD6B (ENSHGLG00000012058) RIPOR3 (ENSHGLG00000012260) ENSHGLG00000012434 #22 PTPN1 (ENSHGLG00000005082) ENSHGLG00000042761 PEDS1 (ENSHGLG00000005163) ENSHGLG00000049806 SNAI1 (ENSHGLG00000005310) RNF114 (ENSHGLG00000005669) SPATA2 (ENSHGLG00000000487) SLC9A8 (ENSHGLG00000006337) B4GALT5 (ENSHGLG00000006719) PTGIS (ENSHGLG00000007083) KCNB1 (ENSHGLG00000038195) ENSHGLG00000049086 ZNFX1 (ENSHGLG00000008068) DDX27 (ENSHGLG00000008388) ENSHGLG00000008730 Hystricomorpha_a ANCESTRAL SPECIES 10 ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 Hystricomorpha_b ANCESTRAL SPECIES 23 ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT01060000248588.a.d.a Long-tailed chinchilla MODERN SPECIES 119 ELMOD1 (ENSCLAG00000011927) ENSCLAG00000011087 #7 ENSCLAG00000015715 CWF19L2 (ENSCLAG00000013844) #9 GUCY1A2 (ENSCLAG00000017060) #10 AASDHPPT (ENSCLAG00000015434) #11 KBTBD3 (ENSCLAG00000014468) #12 MSANTD4 (ENSCLAG00000016121) #13 GRIA4 (ENSCLAG00000012261) #14 ENSCLAG00000015719 #16 ENSCLAG00000012832 #17 ENSCLAG00000015891 #18 DDI1 (ENSCLAG00000014263) #19 PDGFD (ENSCLAG00000013637) #20 DYNC2H1 (ENSCLAG00000014268) #21 DCUN1D5 (ENSCLAG00000010606) #22 MMP13 (ENSCLAG00000011293) #23 MMP12 (ENSCLAG00000014288) #24 MMP3 (ENSCLAG00000012886) #25 MMP1 (ENSCLAG00000011491) #26 MMP10 (ENSCLAG00000013443) #27 MMP8 (ENSCLAG00000014040) #28 MMP27 (ENSCLAG00000010798) #29 MMP20 (ENSCLAG00000013214) #30 MMP7 (ENSCLAG00000015356) #31 BIRC2 (ENSCLAG00000013394) #35 BIRC3 (ENSCLAG00000010783) #36 YAP1 (ENSCLAG00000011113) #37 CFAP300 (ENSCLAG00000013914) CEP126 (ENSCLAG00000012819) TRPC6 (ENSCLAG00000011949) Degu MODERN SPECIES 53 ELMOD1 (ENSODEG00000015056) ENSODEG00000020136 ALKBH8 (ENSODEG00000011567) #8 ENSODEG00000013543 #9 ENSODEG00000012492 #10 ENSODEG00000011994 #11 KBTBD3 (ENSODEG00000012092) #12 MSANTD4 (ENSODEG00000011017) #13 GRIA4 (ENSODEG00000012048) #14 ENSODEG00000013241 #16 ENSODEG00000011629 #17 ENSODEG00000012044 #18 PDGFD (ENSODEG00000011848) #20 DDI1 (ENSODEG00000011789) #19 DYNC2H1 (ENSODEG00000012699) #21 DCUN1D5 (ENSODEG00000012893) #22 MMP13 (ENSODEG00000012128) #23 MMP12 (ENSODEG00000012714) #24 MMP3 (ENSODEG00000012755) #25 MMP10 (ENSODEG00000014848) #27 MMP8 (ENSODEG00000013316) #28 MMP27 (ENSODEG00000012636) #29 MMP20 (ENSODEG00000012590) #30 MMP7 (ENSODEG00000012568) #31 ENSODEG00000012602 #35 ENSODEG00000013275 #36 ENSODEG00000012579 YAP1 (ENSODEG00000012897) #37 ENSODEG00000013051 CFAP300 (ENSODEG00000014307) CEP126 (ENSODEG00000014031) Guinea pig MODERN SPECIES 19 GLB1L2 (ENSCPOG00000000945) B3GAT1 (ENSCPOG00000023573) GUCY1A2 (ENSCPOG00000000335) #10 ENSCPOG00000040462 #9 AASDHPPT (ENSCPOG00000030678) #11 KBTBD3 (ENSCPOG00000003792) #12 MSANTD4 (ENSCPOG00000033859) #13 GRIA4 (ENSCPOG00000001062) #14 ENSCPOG00000009512 #17 ENSCPOG00000026333 #16 ENSCPOG00000011825 #17 CASP12 (ENSCPOG00000035596) #18 DDI1 (ENSCPOG00000000861) #19 PDGFD (ENSCPOG00000038919) #20 DYNC2H1 (ENSCPOG00000014189) #21 DCUN1D5 (ENSCPOG00000036831) #22 MMP13 (ENSCPOG00000000221) #23 MMP12 (ENSCPOG00000036913) #24 MMP3 (ENSCPOG00000033163) #25 MMP1 (ENSCPOG00000006548) #26 MMP10 (ENSCPOG00000035812) #27 MMP8 (ENSCPOG00000013813) #28 MMP27 (ENSCPOG00000035593) #29 MMP20 (ENSCPOG00000036970) #30 ENSCPOG00000038069 #31 BIRC2 (ENSCPOG00000010349) #35 BIRC3 (ENSCPOG00000034907) #36 YAP1 (ENSCPOG00000033105) #37 CFAP300 (ENSCPOG00000011737) CEP126 (ENSCPOG00000001844) ANGPTL5 (ENSCPOG00000001842) Atlantogenata ANCESTRAL SPECIES 40 ENSGT01100000263709 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Afrotheria ANCESTRAL SPECIES 43 ENSGT01040000240879 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Afrotheria_a ANCESTRAL SPECIES 41 ENSGT01040000240879 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175.i.b #35 ENSGT00940000154175.i.a #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 Elephant MODERN SPECIES 340 ENSLAFG00000002248 ELMOD1 (ENSLAFG00000002246) ALKBH8 (ENSLAFG00000017895) #8 CWF19L2 (ENSLAFG00000004402) #9 GUCY1A2 (ENSLAFG00000003075) #10 AASDHPPT (ENSLAFG00000018543) #11 KBTBD3 (ENSLAFG00000013885) #12 MSANTD4 (ENSLAFG00000010986) #13 GRIA4 (ENSLAFG00000010979) #14 ENSLAFG00000016444 #16 ENSLAFG00000022421 #17 CASP12 (ENSLAFG00000023231) #18 DDI1 (ENSLAFG00000004238) #19 PDGFD (ENSLAFG00000004236) #20 DYNC2H1 (ENSLAFG00000016899) #21 DCUN1D5 (ENSLAFG00000016481) #22 MMP13 (ENSLAFG00000006001) #23 MMP12 (ENSLAFG00000010062) #24 MMP3 (ENSLAFG00000010058) #25 MMP1 (ENSLAFG00000001642) #26 MMP10 (ENSLAFG00000023165) #27 MMP8 (ENSLAFG00000013170) #28 MMP27 (ENSLAFG00000013164) #29 MMP20 (ENSLAFG00000010998) #30 MMP7 (ENSLAFG00000002955) #31 ENSLAFG00000002954 #32 BIRC2 (ENSLAFG00000002953) #35 BIRC3 (ENSLAFG00000006047) #36 YAP1 (ENSLAFG00000003216) #37 CFAP300 (ENSLAFG00000003215) CEP126 (ENSLAFG00000003624) Hyrax MODERN SPECIES 2757 DCUN1D5 (ENSPCAG00000004646) #22 Tenrec MODERN SPECIES 3369 ENSETEG00000007356 #22 Xenarthra ANCESTRAL SPECIES 226 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159114 #16 ENSGT00940000161497 #17 ENSGT00940000162555 #18 ENSGT00950000182999.a.b #19 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000162085 #24 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000163375 #27 Armadillo MODERN SPECIES 2666 ENSDNOG00000035114 #21 DCUN1D5 (ENSDNOG00000035460) #22 MMP13 (ENSDNOG00000009362) #23 MMP12 (ENSDNOG00000016544) #24 ENSDNOG00000049442 MMP3 (ENSDNOG00000001886) #25 MMP1 (ENSDNOG00000046998) #26 MMP10 (ENSDNOG00000019850) #27 Sloth MODERN SPECIES 3050 DCUN1D5 (ENSCHOG00000011859) #22 Marsupialia ANCESTRAL SPECIES 5 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT01030000234886 ENSGT00940000162555.b.b #18 ENSGT00940000162428.a.a ##15 ENSGT00940000162428.a.b ##15 ENSGT00940000162555.a.a #18 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000166491 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000156340.b ENSGT00530000063929.b #32 ENSGT00940000154175.g #36 ENSGT00940000154175.h #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000162555.b.b #18 ENSGT00940000162428.a.a ##15 ENSGT00940000162555.a.b #18 ENSGT00940000162428.a.b ##15 ENSGT00940000162555.a.a #18 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000166491 ENSGT00940000159759 #25 ENSGT00940000154907.b #26 ENSGT00940000161871 #28 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000156340.b ENSGT00530000063929.b #32 ENSGT00940000154175.g #36 ENSGT00940000154175.h #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 Common wonbat MODERN SPECIES 486 MSANTD4 (ENSVURG00010013897) #13 GRIA4 (ENSVURG00010013871) #14 ENSVURG00010013863 ENSVURG00010013860 ENSVURG00010013859 ENSVURG00010013851 #18 ENSVURG00010013843 ##15 ENSVURG00010013838 #18 ENSVURG00010013832 ##15 ENSVURG00010013829 #18 ENSVURG00010013823 ENSVURG00010013820 ENSVURG00010013816 PDGFD (ENSVURG00010013466) #20 DYNC2H1 (ENSVURG00010013327) #21 DCUN1D5 (ENSVURG00010013299) #22 MMP13 (ENSVURG00010013285) #23 ENSVURG00010013278 MMP3 (ENSVURG00010013258) #25 MMP1 (ENSVURG00010013247) #26 MMP8 (ENSVURG00010013224) #28 MMP27 (ENSVURG00010013217) #29 ENSVURG00010013210 MMP20 (ENSVURG00010013183) #30 ENSVURG00010013167 ENSVURG00010013157 ENSVURG00010013150 #32 ENSVURG00010013133 #36 YAP1 (ENSVURG00010013100) #37 CFAP300 (ENSVURG00010013089) ENSVURG00010013081 Wallaby MODERN SPECIES 4438 DCUN1D5 (ENSMEUG00000006126) #22 Platypus MODERN SPECIES 12 NPAT (ENSOANG00000010457) ACAT1 (ENSOANG00000010458) CUL5 (ENSOANG00000010459) ENSOANG00000048811 ELMOD1 (ENSOANG00000010462) ALKBH8 (ENSOANG00000010463) #8 CWF19L2 (ENSOANG00000021142) #9 GUCY1A2 (ENSOANG00000010464) #10 AASDHPPT (ENSOANG00000010465) #11 KBTBD3 (ENSOANG00000010467) #12 MSANTD4 (ENSOANG00000038526) #13 GRIA4 (ENSOANG00000010470) #14 ENSOANG00000010472 #15 PDGFD (ENSOANG00000049229) #20 DYNC2H1 (ENSOANG00000010474) #21 DCUN1D5 (ENSOANG00000010476) #22 ENSOANG00000021139 #23 MMP13 (ENSOANG00000010477) #23 ENSOANG00000010478 MMP1 (ENSOANG00000010480) #26 MMP8 (ENSOANG00000010484) #28 ENSOANG00000047319 #31 ENSOANG00000046987 #32 ENSOANG00000010486 #36 YAP1 (ENSOANG00000010488) #37 CFAP300 (ENSOANG00000010489) ENSOANG00000010490 ANGPTL5 (ENSOANG00000010491) TRPC6 (ENSOANG00000010492) ENSOANG00000010494 ARHGAP42 (ENSOANG00000010495) Sauria ANCESTRAL SPECIES 2 ENSGT01030000234590.B.a.b ENSGT00390000000527 ENSGT00390000010184 ENSGT00950000182887.C.a.a.b ENSGT00730000111225 ENSGT00390000009664 ENSGT00390000014721 ENSGT00960000189669 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000156340.b ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a Archelosauria ANCESTRAL SPECIES ENSGT00390000015655.a ENSGT01070000254066 ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b ENSGT00960000189669 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000156340.b ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a Archosauria ANCESTRAL SPECIES 2 ENSGT00940000156648 ENSGT00940000159933 ENSGT00390000015655.a ENSGT01070000254066 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000156340.b ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a Aves ANCESTRAL SPECIES ENSGT00940000159933 ENSGT00390000015655.a ENSGT01070000254066 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b.a ENSGT00390000009313.i.b.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000154907.a.a ##26 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 Neognathae ANCESTRAL SPECIES 1 ENSGT00940000159933 ENSGT00390000015655.a ENSGT01070000254066 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b.a ENSGT00390000009313.i.b.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000154907.a.a ##26 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 Neognathae_b ANCESTRAL SPECIES ENSGT00940000159933 ENSGT00390000015655.a ENSGT01070000254066 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b.a ENSGT00390000009313.i.b.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000154907.a.a ##26 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 Neognathae_c ANCESTRAL SPECIES 11 ENSGT01030000234626.E ENSGT00940000156648 ENSGT00940000159933 ENSGT00390000015655.a ENSGT01070000254066 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b Kakapo MODERN SPECIES 11 CUL5 (ENSSHBG00005014329) RAB39A (ENSSHBG00005014353) SLC35F2 (ENSSHBG00005014363) ENSSHBG00005014382 ENSSHBG00005014387 ELMOD1 (ENSSHBG00005014397) ALKBH8 (ENSSHBG00005000442) #8 CWF19L2 (ENSSHBG00005001417) #9 GUCY1A2 (ENSSHBG00005001462) #10 AASDHPPT (ENSSHBG00005001507) #11 KBTBD3 (ENSSHBG00005001552) #12 MSANTD4 (ENSSHBG00005001565) #13 GRIA4 (ENSSHBG00005001636) #14 PDGFD (ENSSHBG00005001760) #20 DYNC2H1 (ENSSHBG00005002058) #21 DCUN1D5 (ENSSHBG00005002553) #22 MMP13 (ENSSHBG00005002584) #23 ENSSHBG00005002636 MMP1 (ENSSHBG00005002695) #26 MMP27 (ENSSHBG00005002736) #29 MMP7 (ENSSHBG00005002758) #31 TMEM123 (ENSSHBG00005002791) #32 ENSSHBG00005002816 #36 YAP1 (ENSSHBG00005002837) #37 ENSSHBG00005002847 ENSSHBG00005002857 ANGPTL5 (ENSSHBG00005002883) TRPC6 (ENSSHBG00005002929) PGR (ENSSHBG00005002963) ARHGAP42 (ENSSHBG00005003000) CNTN5 (ENSSHBG00005003033) Passeriformes ANCESTRAL SPECIES 1 ENSGT00940000156648 ENSGT00940000159933 ENSGT00390000015655.a ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b.a ENSGT00390000009313.i.b.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000154907.a.a ##26 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b Great tit MODERN SPECIES RAB39A (ENSPMJG00000017791) SLC35F2 (ENSPMJG00000017792) ELMOD1 (ENSPMJG00000017817) ALKBH8 (ENSPMJG00000017818) #8 CWF19L2 (ENSPMJG00000017819) #9 ENSPMJG00000017820 ENSPMJG00000017821 GUCY1A2 (ENSPMJG00000017822) #10 AASDHPPT (ENSPMJG00000017823) #11 KBTBD3 (ENSPMJG00000017824) #12 MSANTD4 (ENSPMJG00000017825) #13 GRIA4 (ENSPMJG00000017826) #14 PDGFD (ENSPMJG00000017831) #20 ENSPMJG00000017833 #21 ENSPMJG00000017834 #21 DCUN1D5 (ENSPMJG00000017835) #22 MMP13 (ENSPMJG00000017836) #23 ENSPMJG00000017837 ENSPMJG00000017838 MMP1 (ENSPMJG00000017839) #26 MMP27 (ENSPMJG00000017840) #29 ENSPMJG00000017841 ##26 TMEM123 (ENSPMJG00000017842) #32 ENSPMJG00000017843 #36 YAP1 (ENSPMJG00000017845) #37 CFAP300 (ENSPMJG00000017846) ENSPMJG00000017848 ANGPTL5 (ENSPMJG00000017849) TRPC6 (ENSPMJG00000017850) PGR (ENSPMJG00000017851) ARHGAP42 (ENSPMJG00000017852) Passeriformes_d ANCESTRAL SPECIES 1 ENSGT00940000156648 ENSGT00940000159933 ENSGT00390000015655.a ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b.a ENSGT00390000009313.i.b.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000154907.a.a ##26 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b Flycatcher MODERN SPECIES ENSFALG00000014232 CUL5 (ENSFALG00000000461) RAB39A (ENSFALG00000026560) SLC35F2 (ENSFALG00000000466) ELMOD1 (ENSFALG00000000474) ALKBH8 (ENSFALG00000000478) #8 CWF19L2 (ENSFALG00000000479) #9 ENSFALG00000000482 GUCY1A2 (ENSFALG00000000486) #10 AASDHPPT (ENSFALG00000000443) #11 KBTBD3 (ENSFALG00000023390) #12 MSANTD4 (ENSFALG00000000440) #13 GRIA4 (ENSFALG00000000431) #14 PDGFD (ENSFALG00000000415) #20 DYNC2H1 (ENSFALG00000000411) #21 DCUN1D5 (ENSFALG00000000403) #22 MMP13 (ENSFALG00000000400) #23 ENSFALG00000000397 ENSFALG00000000394 MMP1 (ENSFALG00000000382) #26 MMP27 (ENSFALG00000000375) #29 ENSFALG00000000372 ##26 ENSFALG00000000371 ENSFALG00000000370 #36 YAP1 (ENSFALG00000000364) #37 CFAP300 (ENSFALG00000000361) ENSFALG00000000358 ANGPTL5 (ENSFALG00000000357) TRPC6 (ENSFALG00000000356) PGR (ENSFALG00000000354) ARHGAP42 (ENSFALG00000000353) Passeriformes_g ANCESTRAL SPECIES 2 ENSGT00940000159933 ENSGT00390000015655.a ENSGT01040000243635 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b.a ENSGT00390000009313.i.b.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000154907.a.a ##26 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b Passeroidea ANCESTRAL SPECIES 5 ENSGT00940000159933 ENSGT00390000015655.a ENSGT01040000243635 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b.a ENSGT00390000009313.i.b.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000154907.a.a ##26 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b Common canary MODERN SPECIES 4 ENSSCAG00000004593 DDX10 (ENSSCAG00000004532) SLC35F2 (ENSSCAG00000004515) ELMOD1 (ENSSCAG00000004505) ALKBH8 (ENSSCAG00000004497) #8 CWF19L2 (ENSSCAG00000004490) #9 ENSSCAG00000004486 ENSSCAG00000004484 GUCY1A2 (ENSSCAG00000004475) #10 AASDHPPT (ENSSCAG00000004448) #11 KBTBD3 (ENSSCAG00000004445) #12 MSANTD4 (ENSSCAG00000004441) #13 GRIA4 (ENSSCAG00000004160) #14 PDGFD (ENSSCAG00000004095) #20 DYNC2H1 (ENSSCAG00000004049) #21 DCUN1D5 (ENSSCAG00000004037) #22 MMP13 (ENSSCAG00000004033) #23 ENSSCAG00000004017 ENSSCAG00000004010 MMP1 (ENSSCAG00000004003) #26 MMP27 (ENSSCAG00000003998) #29 ENSSCAG00000003992 ##26 TMEM123 (ENSSCAG00000003984) #32 ENSSCAG00000003981 #36 YAP1 (ENSSCAG00000003972) #37 CFAP300 (ENSSCAG00000003962) ENSSCAG00000003957 ANGPTL5 (ENSSCAG00000003952) TRPC6 (ENSSCAG00000003932) PGR (ENSSCAG00000003909) ARHGAP42 (ENSSCAG00000003892) Zebra finch MODERN SPECIES RAB39A (ENSTGUG00000029732) SLC35F2 (ENSTGUG00000012641) ENSTGUG00000012656 ELMOD1 (ENSTGUG00000012657) ALKBH8 (ENSTGUG00000012660) #8 CWF19L2 (ENSTGUG00000012664) #9 ENSTGUG00000024944 ENSTGUG00000012665 GUCY1A2 (ENSTGUG00000012667) #10 AASDHPPT (ENSTGUG00000020920) #11 KBTBD3 (ENSTGUG00000027073) #12 MSANTD4 (ENSTGUG00000027619) #13 GRIA4 (ENSTGUG00000012676) #14 PDGFD (ENSTGUG00000012693) #20 DYNC2H1 (ENSTGUG00000012697) #21 DCUN1D5 (ENSTGUG00000020472) #22 MMP13 (ENSTGUG00000012726) #23 ENSTGUG00000028841 ENSTGUG00000012735 MMP1 (ENSTGUG00000012737) #26 MMP27 (ENSTGUG00000023611) #29 ENSTGUG00000018460 #23 TMEM123 (ENSTGUG00000027337) #32 ENSTGUG00000012745 #36 YAP1 (ENSTGUG00000012754) #37 CFAP300 (ENSTGUG00000012760) ENSTGUG00000012764 ANGPTL5 (ENSTGUG00000024680) ENSTGUG00000022925 TRPC6 (ENSTGUG00000012766) PGR (ENSTGUG00000012778) Galloanserae ANCESTRAL SPECIES 1 ENSGT00940000156648 ENSGT00940000159933 ENSGT00390000015655.a ENSGT01070000254066 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b Anatidae ANCESTRAL SPECIES 16 ENSGT00940000156648 ENSGT00940000159933 ENSGT00390000015655.a ENSGT01070000254066 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b Pink-footed goose MODERN SPECIES 135 GUCY1A2 (ENSABRG00000008026) #10 AASDHPPT (ENSABRG00000008045) #11 KBTBD3 (ENSABRG00000008057) #12 MSANTD4 (ENSABRG00000008069) #13 ENSABRG00000008076 ENSABRG00000008103 #14 ENSABRG00000008118 ENSABRG00000008125 PDGFD (ENSABRG00000008147) #20 DYNC2H1 (ENSABRG00000008204) #21 DCUN1D5 (ENSABRG00000008746) #22 MMP13 (ENSABRG00000008766) #23 ENSABRG00000008771 ENSABRG00000008802 MMP1 (ENSABRG00000008947) #26 MMP27 (ENSABRG00000008965) #29 MMP7 (ENSABRG00000008989) #31 TMEM123 (ENSABRG00000009015) #32 ENSABRG00000009019 #36 YAP1 (ENSABRG00000009040) #37 CFAP300 (ENSABRG00000009072) ENSABRG00000009078 ANGPTL5 (ENSABRG00000009100) ENSABRG00000009163 Japanese quail MODERN SPECIES ENSCJPG00005003449 SLC35F2 (ENSCJPG00005003450) ELMOD1 (ENSCJPG00005003480) ALKBH8 (ENSCJPG00005003481) #8 CWF19L2 (ENSCJPG00005003482) #9 ENSCJPG00005003492 GUCY1A2 (ENSCJPG00005003494) #10 ENSCJPG00005003497 AASDHPPT (ENSCJPG00005003500) #11 KBTBD3 (ENSCJPG00005003501) #12 MSANTD4 (ENSCJPG00005003512) #13 GRIA4 (ENSCJPG00005003513) #14 ENSCJPG00005003519 PDGFD (ENSCJPG00005003527) #20 ENSCJPG00005003535 #21 DCUN1D5 (ENSCJPG00005003587) #22 MMP13 (ENSCJPG00005003591) #23 ENSCJPG00005003593 ENSCJPG00005003595 MMP1 (ENSCJPG00005003596) #26 MMP27 (ENSCJPG00005003727) #29 ENSCJPG00005003728 #23 TMEM123 (ENSCJPG00005003755) #32 ENSCJPG00005003757 #36 ENSCJPG00005003758 YAP1 (ENSCJPG00005003761) #37 CFAP300 (ENSCJPG00005003768) ENSCJPG00005003770 ANGPTL5 (ENSCJPG00005003777) ENSCJPG00005003791 TRPC6 (ENSCJPG00005003793) Phasianidae_b ANCESTRAL SPECIES ENSGT00940000156648 ENSGT00940000159933 ENSGT00390000015655.a ENSGT01070000254066 ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b.b ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT00950000182865.b.b.b.c.a.i.a.b.b ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b African ostrich MODERN SPECIES 1026 DYNC2H1 (ENSSCUG00000016290) #21 DCUN1D5 (ENSSCUG00000016305) #22 MMP13 (ENSSCUG00000016309) #23 ENSSCUG00000016315 ENSSCUG00000016319 MMP1 (ENSSCUG00000016322) #26 MMP27 (ENSSCUG00000016323) #29 ENSSCUG00000016328 ##26 ENSSCUG00000016331 #32 ENSSCUG00000016336 #36 YAP1 (ENSSCUG00000016338) #37 Testudinoidea ANCESTRAL SPECIES 1 ENSGT00940000159933 ENSGT00390000015655.a ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b ENSGT00960000189669 ENSGT00940000157765.a #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491.a.a ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000154907.a.a ##26 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b Testudinidae ANCESTRAL SPECIES ENSGT00940000156648 ENSGT00940000159933 ENSGT00390000015655.a ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b ENSGT00940000157765.a #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491.a.a ENSGT00940000166491.a.b ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000154907.a.a ##26 ENSGT00940000160903 #31 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a Emydidae ANCESTRAL SPECIES 19 ENSGT00940000156648 ENSGT00940000159933 ENSGT00390000015655.a ENSGT00940000159782 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.i.b ENSGT00960000189669 ENSGT00940000157765.a #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000166491.a.a ENSGT00940000154907.b.h.b #26 ENSGT00940000154907.b.h.a #26 ENSGT00940000161159 #29 ENSGT00940000154907.a.a ##26 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a ENSGT00940000159713 ENSGT00940000155492.b Three-toed box turtle MODERN SPECIES 65 ACAT1 (ENSTMTG00000010178) CUL5 (ENSTMTG00000010107) RAB39A (ENSTMTG00000010083) SLC35F2 (ENSTMTG00000010053) ELMOD1 (ENSTMTG00000010019) ALKBH8 (ENSTMTG00000009987) #8 CWF19L2 (ENSTMTG00000009945) #9 GUCY1A2 (ENSTMTG00000009909) #10 AASDHPPT (ENSTMTG00000009893) #11 KBTBD3 (ENSTMTG00000009877) #12 MSANTD4 (ENSTMTG00000009855) #13 GRIA4 (ENSTMTG00000009194) #14 ENSTMTG00000009152 PDGFD (ENSTMTG00000009069) #20 DYNC2H1 (ENSTMTG00000008847) #21 DCUN1D5 (ENSTMTG00000008801) #22 ENSTMTG00000008544 #23 MMP13 (ENSTMTG00000008496) #23 Episquamata ANCESTRAL SPECIES 2 ENSGT00390000015655.a ENSGT01070000254066 ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.g.a.a ENSGT00960000189669 ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000154907.a.a.jc ##26 ENSGT00940000154907.a.a.ic ##26 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a Toxicofera ANCESTRAL SPECIES 9 ENSGT00390000015655.a ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.g.a.a ENSGT00960000189669 ENSGT00390000009313.h.a.a ENSGT00940000157765 #10 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620 #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000154907.a.a.jc ##26 ENSGT00940000154907.a.a.ic ##26 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a Elapidae ANCESTRAL SPECIES 10 ENSGT00940000159782 ENSGT00940000168471 #7 ENSGT00940000158563 #8 ENSGT00940000155627 #9 ENSGT00390000009313.h.b.a.a.a.a.a ENSGT00390000009313.g.a.a ENSGT00960000189669 ENSGT00940000157765 #10 ENSGT01010000230278 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620.gc #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000154907.a.a.jc ##26 ENSGT00940000154907.a.a.ic ##26 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a Elapidae_a ANCESTRAL SPECIES 41 ENSGT00390000009313.g.a.a ENSGT00960000189669 ENSGT00390000009313.h.a.a ENSGT00940000157765 #10 ENSGT01010000230278 ENSGT00390000004663 #11 ENSGT00940000158415 #12 ENSGT00440000039469 #13 ENSGT00940000155677.b #14 ENSGT00940000159575 #20 ENSGT00940000154620.gc #21 ENSGT00940000154620.fc #21 ENSGT00940000156155 #22 ENSGT00940000157450 #23 ENSGT00940000165562 ENSGT00940000166491 ENSGT00940000154907.b #26 ENSGT00940000161159 #29 ENSGT00940000161277 #30 ENSGT00940000154907.a.a.jc ##26 ENSGT00940000154907.a.a.ic ##26 ENSGT00530000063929.b #32 ENSGT00940000154175 #36 ENSGT00510000046760.a #37 ENSGT00510000047559 ENSGT00390000013786 ENSGT00940000161966 ENSGT01060000248588.a.d.a Mainland tiger snake MODERN SPECIES 75 ENSNSUG00000006523 ENSNSUG00000006521 GUCY1A2 (ENSNSUG00000006518) #10 AASDHPPT (ENSNSUG00000006517) #11 KBTBD3 (ENSNSUG00000006515) #12 MSANTD4 (ENSNSUG00000006507) #13 GRIA4 (ENSNSUG00000006438) #14 PDGFD (ENSNSUG00000006385) #20 DYNC2H1 (ENSNSUG00000006381) #21 DCUN1D5 (ENSNSUG00000006380) #22 ENSNSUG00000006379 #23 MMP13 (ENSNSUG00000006375) #23 ENSNSUG00000006288 MMP1 (ENSNSUG00000006148) #26 MMP27 (ENSNSUG00000006147) #29 MMP20 (ENSNSUG00000006145) #30 ENSNSUG00000006143 ##26 ENSNSUG00000006090 ##26 TMEM123 (ENSNSUG00000006089) #32 ENSNSUG00000006049 #36 YAP1 (ENSNSUG00000006048) #37 CFAP300 (ENSNSUG00000006047) ENSNSUG00000006044 ENSNSUG00000006043 ANGPTL5 (ENSNSUG00000006042) Blue-lipped sea krait MODERN SPECIES 4372 ENSLLTG00000016502 #21 DCUN1D5 (ENSLLTG00000016498) #22 Lizard MODERN SPECIES 2 ENSACAG00000045159 ENSACAG00000028389 ENSACAG00000035285 ENSACAG00000039444 ENSACAG00000042797 ENSACAG00000028881 ENSACAG00000036271 GUCY1A2 (ENSACAG00000011056) #10 ENSACAG00000035759 AASDHPPT (ENSACAG00000011121) #11 KBTBD3 (ENSACAG00000011146) #12 MSANTD4 (ENSACAG00000011157) #13 GRIA4 (ENSACAG00000011167) #14 PDGFD (ENSACAG00000011867) #20 DYNC2H1 (ENSACAG00000011923) #21 DCUN1D5 (ENSACAG00000012400) #22 MMP13 (ENSACAG00000012443) #23 ENSACAG00000023762 ENSACAG00000039814 ENSACAG00000012628 ENSACAG00000012632 #26 ENSACAG00000040392 #26 MMP27 (ENSACAG00000025988) #29 MMP20 (ENSACAG00000021026) #30 ENSACAG00000026401 ##26 ENSACAG00000012635 ENSACAG00000012648 #32 ENSACAG00000012650 #36 YAP1 (ENSACAG00000012742) #37 ENSACAG00000035332 CFAP300 (ENSACAG00000012802) tuatara MODERN SPECIES 1676 PDGFD (ENSSPUG00000010745) #20 DYNC2H1 (ENSSPUG00000010539) #21 DCUN1D5 (ENSSPUG00000010486) #22 ENSSPUG00000010470 #23 MMP13 (ENSSPUG00000010429) #23