Sarcopterygii	ANCESTRAL SPECIES	33	ENSGT00940000161187	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000165549	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00940000166589	ENSGT00940000169158	ENSGT00940000160919 #32	ENSGT00660000097353	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A
Tetrapoda	ANCESTRAL SPECIES	18	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00940000166589	ENSGT00940000169158	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A
Amniota	ANCESTRAL SPECIES	21	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A
Mammalia	ANCESTRAL SPECIES	17	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35
Theria	ANCESTRAL SPECIES	16	ENSGT00550000076432	ENSGT00390000010165.i.b.a #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35
Eutheria	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000167742 #10	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Primates	ANCESTRAL SPECIES	4	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Simiiformes	ANCESTRAL SPECIES	3	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00910000147932	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Catarrhini	ANCESTRAL SPECIES	3	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000165354 #11	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00910000147932	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000167742 #10	ENSGT00940000165354 #11	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00910000147932	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00910000147770	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Hominidae	ANCESTRAL SPECIES	3	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000165354 #11	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00910000147932	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00910000147770	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000165354 #11	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00910000147932	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00910000147770	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000167742 #10	ENSGT00940000165354 #11	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00910000147932	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00910000147770	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Human	MODERN SPECIES		SSU72 (ENSG00000160075) #7	TMEM240 (ENSG00000205090) #8	ATAD3A (ENSG00000197785) #9	ATAD3B (ENSG00000160072) #10	ATAD3C (ENSG00000215915) #11	VWA1 (ENSG00000179403) #12	TMEM88B (ENSG00000205116) #13	ANKRD65 (ENSG00000235098) #14	MRPL20 (ENSG00000242485) #15	CCNL2 (ENSG00000221978) #16	AURKAIP1 (ENSG00000175756) #17	MXRA8 (ENSG00000162576) #18	DVL1 (ENSG00000107404) #19	TAS1R3 (ENSG00000169962) #20	CPTP (ENSG00000224051) #21	INTS11 (ENSG00000127054) #22	PUSL1 (ENSG00000169972) #23	ACAP3 (ENSG00000131584) #24	SCNN1D (ENSG00000162572) #25	UBE2J2 (ENSG00000160087) #26	C1QTNF12 (ENSG00000184163) #27	B3GALT6 (ENSG00000176022) #28	SDF4 (ENSG00000078808) #29	TNFRSF4 (ENSG00000186827) #30	TNFRSF18 (ENSG00000186891) #31	TTLL10 (ENSG00000162571) #32	C1orf159 (ENSG00000131591) #33	RNF223 (ENSG00000237330) #34	AGRN (ENSG00000188157) #35	ISG15 (ENSG00000187608) #36	HES4 (ENSG00000188290) #37
Pan	ANCESTRAL SPECIES		ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000167742 #10	ENSGT00940000165354 #11	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00910000147932	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00910000147770	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000158337.k #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Chimpanzee	MODERN SPECIES		TMEM240 (ENSPTRG00000046881) #8	ENSPTRG00000044190 #9	ATAD3B (ENSPTRG00000000031) #10	ATAD3C (ENSPTRG00000000033) #11	VWA1 (ENSPTRG00000049572) #12	TMEM88B (ENSPTRG00000047774) #13	ANKRD65 (ENSPTRG00000051520) #14	MRPL20 (ENSPTRG00000000029) #15	ENSPTRG00000044477	CCNL2 (ENSPTRG00000000028) #16	AURKAIP1 (ENSPTRG00000000027) #17	MXRA8 (ENSPTRG00000045448) #18	DVL1 (ENSPTRG00000000025) #19	TAS1R3 (ENSPTRG00000000024) #20	CPTP (ENSPTRG00000046367) #21	INTS11 (ENSPTRG00000051102) #22	PUSL1 (ENSPTRG00000000021) #23	ACAP3 (ENSPTRG00000024081) #24	SCNN1D (ENSPTRG00000000017) #25	ENSPTRG00000050959	UBE2J2 (ENSPTRG00000051432) #26	C1QTNF12 (ENSPTRG00000046221) #27	B3GALT6 (ENSPTRG00000042781) #28	SDF4 (ENSPTRG00000050180) #29	TNFRSF4 (ENSPTRG00000044847) #30	TNFRSF18 (ENSPTRG00000000009) #31	TTLL10 (ENSPTRG00000000008) #32	ENSPTRG00000048096	ENSPTRG00000044667	C1H1orf159 (ENSPTRG00000052382) #33	RNF223 (ENSPTRG00000049634) #34
Bonobo	MODERN SPECIES		ENSPPAG00000034908	SSU72 (ENSPPAG00000038268) #7	TMEM240 (ENSPPAG00000035082) #8	ENSPPAG00000040360 #9	ATAD3C (ENSPPAG00000031921) #11	ENSPPAG00000028474 #12	ENSPPAG00000033573 #14	ENSPPAG00000042350 #15	ENSPPAG00000016221	CCNL2 (ENSPPAG00000040287) #16	AURKAIP1 (ENSPPAG00000035959) #17	ENSPPAG00000033475 #18	DVL1 (ENSPPAG00000023215) #19	TAS1R3 (ENSPPAG00000035375) #20	CPTP (ENSPPAG00000031341) #21	INTS11 (ENSPPAG00000037865) #22	PUSL1 (ENSPPAG00000029283) #23	ACAP3 (ENSPPAG00000035731) #24	SCNN1D (ENSPPAG00000039962) #25	ENSPPAG00000035205	UBE2J2 (ENSPPAG00000031850) #26	C1QTNF12 (ENSPPAG00000042604) #27	ENSPPAG00000036063 #29	TNFRSF4 (ENSPPAG00000028659) #30	ENSPPAG00000038527 #31	TTLL10 (ENSPPAG00000035260) #32	ENSPPAG00000030767 #33	AGRN (ENSPPAG00000031420) #35	ISG15 (ENSPPAG00000030476) #36	PERM1 (ENSPPAG00000038627)	PLEKHN1 (ENSPPAG00000042527)
Gorilla	MODERN SPECIES		SSU72 (ENSGGOG00000004421) #7	TMEM240 (ENSGGOG00000004417) #8	ATAD3A (ENSGGOG00000004411) #9	ENSGGOG00000042374 #11	ENSGGOG00000004404 #10	ENSGGOG00000043976	TMEM88B (ENSGGOG00000038572) #13	ANKRD65 (ENSGGOG00000028321) #14	ENSGGOG00000027251 #15	CCNL2 (ENSGGOG00000008235) #16	AURKAIP1 (ENSGGOG00000008239) #17	ENSGGOG00000025096 #18	DVL1 (ENSGGOG00000005389) #19	TAS1R3 (ENSGGOG00000005386) #20	CPTP (ENSGGOG00000005379) #21	INTS11 (ENSGGOG00000005366) #22	PUSL1 (ENSGGOG00000005364) #23	ACAP3 (ENSGGOG00000005348) #24	SCNN1D (ENSGGOG00000005342) #25	UBE2J2 (ENSGGOG00000005336) #26	ENSGGOG00000039824	C1QTNF12 (ENSGGOG00000005978) #27	SDF4 (ENSGGOG00000006530) #29	TNFRSF4 (ENSGGOG00000008524) #30	ENSGGOG00000008532 #31	TTLL10 (ENSGGOG00000009551) #32	ENSGGOG00000014169 #33	AGRN (ENSGGOG00000014970) #35	ISG15 (ENSGGOG00000014967) #36	HES4 (ENSGGOG00000013399) #37	PLEKHN1 (ENSGGOG00000007755)
Orangutan	MODERN SPECIES		FNDC10 (ENSPPYG00000034201)	SSU72 (ENSPPYG00000002000) #7	TMEM240 (ENSPPYG00000002001) #8	ATAD3A (ENSPPYG00000002002) #9	ENSPPYG00000002003 #9	VWA1 (ENSPPYG00000002005) #12	TMEM88B (ENSPPYG00000030614) #13	ANKRD65 (ENSPPYG00000031078) #14	MRPL20 (ENSPPYG00000032271) #15	ENSPPYG00000002007 #16	AURKAIP1 (ENSPPYG00000002008) #17	MXRA8 (ENSPPYG00000002009) #18	DVL1 (ENSPPYG00000002010) #19	TAS1R3 (ENSPPYG00000002011) #20	CPTP (ENSPPYG00000002012) #21	INTS11 (ENSPPYG00000002013) #22	PUSL1 (ENSPPYG00000002014) #23	ACAP3 (ENSPPYG00000002015) #24	ENSPPYG00000002016 #25	UBE2J2 (ENSPPYG00000002017) #26	C1QTNF12 (ENSPPYG00000036017) #27	B3GALT6 (ENSPPYG00000041358) #28	SDF4 (ENSPPYG00000002019) #29	TNFRSF4 (ENSPPYG00000002020) #30	ENSPPYG00000002021 #31	TTLL10 (ENSPPYG00000002022) #32	C1H1orf159 (ENSPPYG00000030233) #33	RNF223 (ENSPPYG00000041410) #34	AGRN (ENSPPYG00000002025) #35	ISG15 (ENSPPYG00000002026) #36	HES4 (ENSPPYG00000036638) #37
Gibbon	MODERN SPECIES	16	ENSNLEG00000000172	ENSNLEG00000000165	TMEM52 (ENSNLEG00000000163)	CALML6 (ENSNLEG00000000159)	GNB1 (ENSNLEG00000000142)	NADK (ENSNLEG00000000139)	SLC35E2B (ENSNLEG00000000133)	ENSNLEG00000000077	FNDC10 (ENSNLEG00000018644)	ENSNLEG00000029398 #7	ENSNLEG00000034009 #8	ATAD3A (ENSNLEG00000000068) #9	MXRA8 (ENSNLEG00000000062) #18	DVL1 (ENSNLEG00000000028) #19	CPTP (ENSNLEG00000000061) #21	INTS11 (ENSNLEG00000000053) #22	PUSL1 (ENSNLEG00000000051) #23	ENSNLEG00000000050 #24	SCNN1D (ENSNLEG00000000040) #25	ENSNLEG00000000036	UBE2J2 (ENSNLEG00000029156) #26	ENSNLEG00000000035 #27	ENSNLEG00000000034 #29	TNFRSF4 (ENSNLEG00000000032) #30	ENSNLEG00000000030 #31	TTLL10 (ENSNLEG00000000029) #32	C1orf159 (ENSNLEG00000000026) #33	ENSNLEG00000028621 #34	AGRN (ENSNLEG00000000023) #35	PERM1 (ENSNLEG00000000019)	PLEKHN1 (ENSNLEG00000000018)
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000165354.a.b #11	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059.i #9	ENSGT00940000165354.a.b #11	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239.l #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059.i #9	ENSGT00940000165354.a.b #11	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239.l #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Macaca	ANCESTRAL SPECIES		ENSGT00400000023987 #8	ENSGT00730000111059.i #9	ENSGT00940000165354.a.b #11	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239.k.a #16	ENSGT00960000192403	ENSGT00940000159239.k.b #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Macaca_a	ANCESTRAL SPECIES	27							ENSGT00730000111059.j #9	ENSGT00940000163707 #14	ENSGT00960000192403	ENSGT00940000159239.k.b #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Rhesus	MODERN SPECIES		ENSMMUG00000060167	SSU72 (ENSMMUG00000001551) #7	ENSMMUG00000051354	ENSMMUG00000001549 #9	ENSMMUG00000058426	ENSMMUG00000064596 #9	ANKRD65 (ENSMMUG00000060384) #14	MRPL20 (ENSMMUG00000051786)	ENSMMUG00000006904 #16	AURKAIP1 (ENSMMUG00000059208) #17	ENSMMUG00000062087	MXRA8 (ENSMMUG00000003582) #18	DVL1 (ENSMMUG00000007109) #19	TAS1R3 (ENSMMUG00000057616) #20	CPTP (ENSMMUG00000013875) #21	INTS11 (ENSMMUG00000013866) #22	PUSL1 (ENSMMUG00000016279) #23	ACAP3 (ENSMMUG00000013862) #24	SCNN1D (ENSMMUG00000032292) #25	UBE2J2 (ENSMMUG00000010030) #26	C1QTNF12 (ENSMMUG00000030888) #27	B3GALT6 (ENSMMUG00000019519) #28	SDF4 (ENSMMUG00000019518) #29	ENSMMUG00000059172	TNFRSF4 (ENSMMUG00000059937) #30	TNFRSF18 (ENSMMUG00000014205) #31	TTLL10 (ENSMMUG00000045769) #32	C1H1orf159 (ENSMMUG00000018699) #33	RNF223 (ENSMMUG00000032293) #34	AGRN (ENSMMUG00000000838) #35	ISG15 (ENSMMUG00000050757) #36
Pig-tailed macaque	MODERN SPECIES	263	SSU72 (ENSMNEG00000036552) #7	TMEM240 (ENSMNEG00000043465) #8	ATAD3A (ENSMNEG00000034893) #9	ENSMNEG00000031791	ATAD3C (ENSMNEG00000027629) #11	VWA1 (ENSMNEG00000042597) #12	TMEM88B (ENSMNEG00000044664) #13	ANKRD65 (ENSMNEG00000034638) #14	MRPL20 (ENSMNEG00000041891) #15	CCNL2 (ENSMNEG00000040913) #16	AURKAIP1 (ENSMNEG00000037344) #17	MXRA8 (ENSMNEG00000041023) #18	DVL1 (ENSMNEG00000041314) #19	TAS1R3 (ENSMNEG00000043210) #20	CPTP (ENSMNEG00000037972) #21	INTS11 (ENSMNEG00000030021) #22	PUSL1 (ENSMNEG00000037989) #23	ACAP3 (ENSMNEG00000035091) #24	SCNN1D (ENSMNEG00000036232) #25	UBE2J2 (ENSMNEG00000036880) #26	C1QTNF12 (ENSMNEG00000031628) #27	SDF4 (ENSMNEG00000014057) #29	TNFRSF4 (ENSMNEG00000042092) #30	TNFRSF18 (ENSMNEG00000033859) #31	TTLL10 (ENSMNEG00000032030) #32	C1orf159 (ENSMNEG00000012889) #33	AGRN (ENSMNEG00000039164) #35	ISG15 (ENSMNEG00000045349) #36	HES4 (ENSMNEG00000031155) #37	ENSMNEG00000044257	PERM1 (ENSMNEG00000017907)
Cercopithecinae_b	ANCESTRAL SPECIES	58						ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239.l #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37	ENSGT00390000017652
Olive baboon	MODERN SPECIES								TMEM88B (ENSPANG00000005469) #13	ANKRD65 (ENSPANG00000017689) #14	MRPL20 (ENSPANG00000015802) #15	CCNL2 (ENSPANG00000011414) #16	AURKAIP1 (ENSPANG00000026224) #17	MXRA8 (ENSPANG00000026092) #18	DVL1 (ENSPANG00000009496) #19	TAS1R3 (ENSPANG00000005236) #20	CPTP (ENSPANG00000000592) #21	INTS11 (ENSPANG00000019349) #22	PUSL1 (ENSPANG00000000591) #23	ACAP3 (ENSPANG00000011026) #24	SCNN1D (ENSPANG00000008757) #25	UBE2J2 (ENSPANG00000018973) #26	C1QTNF12 (ENSPANG00000021265) #27	SDF4 (ENSPANG00000013126) #29	ENSPANG00000018595 #30	ENSPANG00000013127 #31	TTLL10 (ENSPANG00000012551) #32	ENSPANG00000051166	C1orf159 (ENSPANG00000004619) #33	RNF223 (ENSPANG00000044589) #34	ENSPANG00000045748	AGRN (ENSPANG00000024356) #35	ISG15 (ENSPANG00000030246) #36
Cercopithecinae_d	ANCESTRAL SPECIES	161										ENSGT00940000159239.l #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37	ENSGT00390000017652	ENSGT00390000003618
Sooty mangabey	MODERN SPECIES	384						VWA1 (ENSCATG00000030646) #12	TMEM88B (ENSCATG00000005573) #13	ENSCATG00000036576	MRPL20 (ENSCATG00000033927) #15	CCNL2 (ENSCATG00000030730) #16	AURKAIP1 (ENSCATG00000037072) #17	MXRA8 (ENSCATG00000022961) #18	DVL1 (ENSCATG00000032511) #19	TAS1R3 (ENSCATG00000004750) #20	CPTP (ENSCATG00000038599) #21	INTS11 (ENSCATG00000005882) #22	PUSL1 (ENSCATG00000018260) #23	ACAP3 (ENSCATG00000034448) #24	SCNN1D (ENSCATG00000036571) #25	UBE2J2 (ENSCATG00000020483) #26	C1QTNF12 (ENSCATG00000041036) #27	SDF4 (ENSCATG00000039922) #29	TNFRSF4 (ENSCATG00000039854) #30	TNFRSF18 (ENSCATG00000037567) #31	TTLL10 (ENSCATG00000042489) #32	C1orf159 (ENSCATG00000030223) #33	AGRN (ENSCATG00000031994) #35	ISG15 (ENSCATG00000006472) #36	HES4 (ENSCATG00000029294) #37	PERM1 (ENSCATG00000034880)	PLEKHN1 (ENSCATG00000039171)
Drill	MODERN SPECIES	1400									ENSMLEG00000044165	MRPL20 (ENSMLEG00000037086) #15	CCNL2 (ENSMLEG00000035035) #16	AURKAIP1 (ENSMLEG00000038730) #17	DVL1 (ENSMLEG00000028018) #19	TAS1R3 (ENSMLEG00000029834) #20	CPTP (ENSMLEG00000039271) #21	INTS11 (ENSMLEG00000044372) #22	ENSMLEG00000039224 #23	ACAP3 (ENSMLEG00000039298) #24	SCNN1D (ENSMLEG00000032722) #25	UBE2J2 (ENSMLEG00000037769) #26	C1QTNF12 (ENSMLEG00000029066) #27	SDF4 (ENSMLEG00000000511) #29	TNFRSF4 (ENSMLEG00000038313) #30	TNFRSF18 (ENSMLEG00000043493) #31	TTLL10 (ENSMLEG00000034578) #32	ENSMLEG00000028744 #33	AGRN (ENSMLEG00000041750) #35	ISG15 (ENSMLEG00000036816) #36	PERM1 (ENSMLEG00000018120)	PLEKHN1 (ENSMLEG00000032153)	KLHL17 (ENSMLEG00000029991)
Vervet Monkey	MODERN SPECIES	12	MIB2 (ENSCSAG00000000696)	FNDC10 (ENSCSAG00000000633)	SSU72 (ENSCSAG00000000694) #7	TMEM240 (ENSCSAG00000000693) #8	ATAD3A (ENSCSAG00000000692) #9	VWA1 (ENSCSAG00000000691) #12	TMEM88B (ENSCSAG00000000690) #13	ANKRD65 (ENSCSAG00000000689) #14	ENSCSAG00000000688 #15	CCNL2 (ENSCSAG00000000687) #16	AURKAIP1 (ENSCSAG00000000686) #17	MXRA8 (ENSCSAG00000000685) #18	DVL1 (ENSCSAG00000000684) #19	TAS1R3 (ENSCSAG00000000683) #20	CPTP (ENSCSAG00000000682) #21	INTS11 (ENSCSAG00000000681) #22	PUSL1 (ENSCSAG00000000680) #23	ACAP3 (ENSCSAG00000000679) #24	SCNN1D (ENSCSAG00000000678) #25	UBE2J2 (ENSCSAG00000000677) #26	C1QTNF12 (ENSCSAG00000000676) #27	B3GALT6 (ENSCSAG00000000632) #28	SDF4 (ENSCSAG00000000675) #29	TNFRSF18 (ENSCSAG00000000674) #31	TNFRSF4 (ENSCSAG00000000673) #30	TTLL10 (ENSCSAG00000000672) #32	ENSCSAG00000000671 #33	RNF223 (ENSCSAG00000000631) #34	AGRN (ENSCSAG00000000670) #35	ISG15 (ENSCSAG00000000669) #36	HES4 (ENSCSAG00000000668) #37
Rhinopithecus	ANCESTRAL SPECIES	52	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000165354.a.a #11	ENSGT00940000160734 #12	ENSGT00910000148136	ENSGT00730000111599 #13	ENSGT00910000147197	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00500000045558	ENSGT00390000017652
Black snub-nosed monkey	MODERN SPECIES	1215					ENSRBIG00000027855	TMEM88B (ENSRBIG00000037435) #13	ENSRBIG00000040170	MRPL20 (ENSRBIG00000042278) #15	CCNL2 (ENSRBIG00000029507) #16	AURKAIP1 (ENSRBIG00000043439) #17	MXRA8 (ENSRBIG00000043145) #18	ENSRBIG00000034594 #19	TAS1R3 (ENSRBIG00000043277) #20	CPTP (ENSRBIG00000043522) #21	PUSL1 (ENSRBIG00000036842) #23	INTS11 (ENSRBIG00000039487) #22	ACAP3 (ENSRBIG00000009210) #24	SCNN1D (ENSRBIG00000030913) #25	UBE2J2 (ENSRBIG00000035938) #26	C1QTNF12 (ENSRBIG00000034029) #27	B3GALT6 (ENSRBIG00000039680) #28	SDF4 (ENSRBIG00000043378) #29	TNFRSF4 (ENSRBIG00000040363) #30	TNFRSF18 (ENSRBIG00000035692) #31
Golden snub-nosed monkey	DUPLICATION
Golden snub-nosed monkey	MODERN SPECIES	2011																INTS11 (ENSRROG00000039631) #22	PUSL1 (ENSRROG00000030704) #23	ACAP3 (ENSRROG00000030139) #24	SCNN1D (ENSRROG00000042008) #25	UBE2J2 (ENSRROG00000043237) #26	C1QTNF12 (ENSRROG00000026969) #27	B3GALT6 (ENSRROG00000033442) #28	SDF4 (ENSRROG00000034933) #29	TNFRSF4 (ENSRROG00000042846) #30	TNFRSF18 (ENSRROG00000032436) #31	TTLL10 (ENSRROG00000001573) #32	ENSRROG00000040692 #33	AGRN (ENSRROG00000043739) #35	ISG15 (ENSRROG00000040198) #36	ENSRROG00000038102	PERM1 (ENSRROG00000044918)
Golden snub-nosed monkey	MODERN SPECIES	2021														TAS1R3 (ENSRROG00000009550) #20	CPTP (ENSRROG00000042420) #21	ENSRROG00000033601 #22
Platyrrhini	ANCESTRAL SPECIES		ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059.e #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00910000147932	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Cebidae	ANCESTRAL SPECIES	1	ENSGT00940000158097.n	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059.e #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Marmoset	MODERN SPECIES	19	MIB2 (ENSCJAG00000010931)	FNDC10 (ENSCJAG00000066377)	SSU72 (ENSCJAG00000010957) #7	TMEM240 (ENSCJAG00000037689) #8	ATAD3A (ENSCJAG00000010991) #9	VWA1 (ENSCJAG00000060872) #12	TMEM88B (ENSCJAG00000011035) #13	ENSCJAG00000069473	MRPL20 (ENSCJAG00000039231) #15	CCNL2 (ENSCJAG00000011043) #16	AURKAIP1 (ENSCJAG00000034618) #17	MXRA8 (ENSCJAG00000040810) #18	DVL1 (ENSCJAG00000005366) #19	TAS1R3 (ENSCJAG00000011121) #20	CPTP (ENSCJAG00000011139) #21	INTS11 (ENSCJAG00000011144) #22	PUSL1 (ENSCJAG00000010972) #23	ACAP3 (ENSCJAG00000011211) #24	UBE2J2 (ENSCJAG00000011315) #26	C1QTNF12 (ENSCJAG00000011323) #27	B3GALT6 (ENSCJAG00000011328) #28	SDF4 (ENSCJAG00000011333) #29	TNFRSF4 (ENSCJAG00000011350) #30	TNFRSF18 (ENSCJAG00000011360) #31	C1orf159 (ENSCJAG00000011405) #33	RNF223 (ENSCJAG00000011411) #34	AGRN (ENSCJAG00000011412) #35	ISG15 (ENSCJAG00000011428) #36	HES4 (ENSCJAG00000043879) #37	ENSCJAG00000086937	PLEKHN1 (ENSCJAG00000082373)
Cebidae_a	ANCESTRAL SPECIES		ENSGT00940000158097.n	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059.e #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37	ENSGT00390000017652
Capuchin	MODERN SPECIES	145	MIB2 (ENSCCAG00000018265)	FNDC10 (ENSCCAG00000019597)	SSU72 (ENSCCAG00000027058) #7	TMEM240 (ENSCCAG00000030187) #8	ATAD3A (ENSCCAG00000020860) #9	VWA1 (ENSCCAG00000021280) #12	TMEM88B (ENSCCAG00000028939) #13	ANKRD65 (ENSCCAG00000027232) #14	MRPL20 (ENSCCAG00000032768) #15	CCNL2 (ENSCCAG00000022310) #16	AURKAIP1 (ENSCCAG00000036849) #17	MXRA8 (ENSCCAG00000023268) #18	DVL1 (ENSCCAG00000037464) #19	TAS1R3 (ENSCCAG00000022905) #20	CPTP (ENSCCAG00000017027) #21	INTS11 (ENSCCAG00000026348) #22	PUSL1 (ENSCCAG00000027475) #23	ACAP3 (ENSCCAG00000032305) #24	SCNN1D (ENSCCAG00000031462) #25	UBE2J2 (ENSCCAG00000037287) #26	C1QTNF12 (ENSCCAG00000036747) #27	B3GALT6 (ENSCCAG00000002619) #28	SDF4 (ENSCCAG00000035208) #29	TNFRSF4 (ENSCCAG00000034195) #30	TNFRSF18 (ENSCCAG00000037985) #31	ENSCCAG00000027677 #32	C1orf159 (ENSCCAG00000034770) #33	AGRN (ENSCCAG00000031109) #35	ISG15 (ENSCCAG00000023397) #36	HES4 (ENSCCAG00000032461) #37	ENSCCAG00000021791
Bolivian squirrel monkey	MODERN SPECIES	158	ENSSBOG00000027211	MMP23B (ENSSBOG00000017997)	MIB2 (ENSSBOG00000022066)	ENSSBOG00000035377 ##7	TMEM240 (ENSSBOG00000029038) #8	ATAD3A (ENSSBOG00000029009) #9	VWA1 (ENSSBOG00000026283) #12	ENSSBOG00000031827 #13	ENSSBOG00000020089	MRPL20 (ENSSBOG00000035454) #15	CCNL2 (ENSSBOG00000019730) #16	AURKAIP1 (ENSSBOG00000029210) #17	DVL1 (ENSSBOG00000031456) #19	TAS1R3 (ENSSBOG00000027221) #20	CPTP (ENSSBOG00000028410) #21	INTS11 (ENSSBOG00000018848) #22	PUSL1 (ENSSBOG00000032249) #23	ACAP3 (ENSSBOG00000018879) #24	SCNN1D (ENSSBOG00000004031) #25	UBE2J2 (ENSSBOG00000031407) #26	C1QTNF12 (ENSSBOG00000020454) #27	SDF4 (ENSSBOG00000024075) #29	TNFRSF4 (ENSSBOG00000034273) #30	TNFRSF18 (ENSSBOG00000035108) #31	ENSSBOG00000026356 #32	C1orf159 (ENSSBOG00000033308) #33	AGRN (ENSSBOG00000024879) #35	ISG15 (ENSSBOG00000023346) #36	PERM1 (ENSSBOG00000024026)	PLEKHN1 (ENSSBOG00000032403)	KLHL17 (ENSSBOG00000022206)
Mas night monkey	MODERN SPECIES	1186	MIB2 (ENSANAG00000034440)	FNDC10 (ENSANAG00000021264)	ENSANAG00000033500 ##7	TMEM240 (ENSANAG00000024018) #8	ENSANAG00000028767 #9	ENSANAG00000032071	ENSANAG00000036119	MRPL20 (ENSANAG00000021078) #15	ENSANAG00000030218	CCNL2 (ENSANAG00000032407) #16	AURKAIP1 (ENSANAG00000025643) #17	MXRA8 (ENSANAG00000026233) #18	DVL1 (ENSANAG00000029308) #19	TAS1R3 (ENSANAG00000024970) #20	CPTP (ENSANAG00000030073) #21	INTS11 (ENSANAG00000034133) #22	PUSL1 (ENSANAG00000037456) #23	ACAP3 (ENSANAG00000027588) #24	SCNN1D (ENSANAG00000033990) #25	UBE2J2 (ENSANAG00000026485) #26	C1QTNF12 (ENSANAG00000035013) #27	B3GALT6 (ENSANAG00000035057) #28	SDF4 (ENSANAG00000020086) #29	TNFRSF18 (ENSANAG00000022557) #31	ENSANAG00000019948 #32	C1orf159 (ENSANAG00000027907) #33	AGRN (ENSANAG00000034142) #35	ISG15 (ENSANAG00000031785) #36	PERM1 (ENSANAG00000026237)	PLEKHN1 (ENSANAG00000024404)	ENSANAG00000030481
Tarsier	MODERN SPECIES	1344															CPTP (ENSTSYG00000036695) #21	INTS11 (ENSTSYG00000012018) #22
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00940000161187	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37	ENSGT00390000017652
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000161187	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37	ENSGT00390000017652
Lemuriformes_a	ANCESTRAL SPECIES	98	ENSGT00940000161187	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37	ENSGT00390000017652
Coquerels sifaka	MODERN SPECIES	702	ENSPCOG00000026014	MMP23B (ENSPCOG00000023538)	MIB2 (ENSPCOG00000022297)	SSU72 (ENSPCOG00000022491) #7	TMEM240 (ENSPCOG00000014392) #8	ATAD3A (ENSPCOG00000028596) #9	VWA1 (ENSPCOG00000000090) #12	TMEM88B (ENSPCOG00000023036) #13	ENSPCOG00000025653 #15	CCNL2 (ENSPCOG00000003325) #16	AURKAIP1 (ENSPCOG00000015062) #17	MXRA8 (ENSPCOG00000028505) #18	DVL1 (ENSPCOG00000025874) #19	TAS1R3 (ENSPCOG00000020637) #20	CPTP (ENSPCOG00000027575) #21	INTS11 (ENSPCOG00000016861) #22	ENSPCOG00000024685 #23	ACAP3 (ENSPCOG00000015309) #24	UBE2J2 (ENSPCOG00000000175) #26	C1QTNF12 (ENSPCOG00000028029) #27	SDF4 (ENSPCOG00000027719) #29	TNFRSF4 (ENSPCOG00000028210) #30	TNFRSF18 (ENSPCOG00000015501) #31	TTLL10 (ENSPCOG00000026951) #32	C1orf159 (ENSPCOG00000023494) #33	AGRN (ENSPCOG00000014749) #35	ISG15 (ENSPCOG00000017547) #36	HES4 (ENSPCOG00000024707) #37	ENSPCOG00000026589	PLEKHN1 (ENSPCOG00000021927)	KLHL17 (ENSPCOG00000026892)
Greater bamboo lemur	MODERN SPECIES	632	ENSPSMG00000013426	MIB2 (ENSPSMG00000013397)	FNDC10 (ENSPSMG00000013360)	SSU72 (ENSPSMG00000013350) #7	TMEM240 (ENSPSMG00000013341) #8	ATAD3A (ENSPSMG00000013334) #9	VWA1 (ENSPSMG00000013312) #12	TMEM88B (ENSPSMG00000013306) #13	MRPL20 (ENSPSMG00000013303) #15	CCNL2 (ENSPSMG00000013293) #16	AURKAIP1 (ENSPSMG00000013270) #17	MXRA8 (ENSPSMG00000013260) #18	DVL1 (ENSPSMG00000013188) #19	TAS1R3 (ENSPSMG00000013115) #20	CPTP (ENSPSMG00000013100) #21	INTS11 (ENSPSMG00000012911) #22	PUSL1 (ENSPSMG00000012694) #23	ENSPSMG00000012682 #24	ENSPSMG00000012675 #24	UBE2J2 (ENSPSMG00000012628) #26	C1QTNF12 (ENSPSMG00000012598) #27	B3GALT6 (ENSPSMG00000012596) #28	SDF4 (ENSPSMG00000012585) #29	TNFRSF4 (ENSPSMG00000012559) #30	ENSPSMG00000012548 #31	TTLL10 (ENSPSMG00000012536) #32	C1orf159 (ENSPSMG00000012521) #33	RNF223 (ENSPSMG00000012513) #34	ENSPSMG00000012506 #35	ISG15 (ENSPSMG00000012496) #36	HES4 (ENSPSMG00000012491) #37
Mouse lemur	MODERN SPECIES	11	ENSMICG00000011043	MMP23B (ENSMICG00000011039)	MIB2 (ENSMICG00000011021)	SSU72 (ENSMICG00000043712) #7	TMEM240 (ENSMICG00000029887) #8	ATAD3A (ENSMICG00000011005) #9	VWA1 (ENSMICG00000035653) #12	TMEM88B (ENSMICG00000032326) #13	MRPL20 (ENSMICG00000041892) #15	CCNL2 (ENSMICG00000014237) #16	AURKAIP1 (ENSMICG00000014229) #17	MXRA8 (ENSMICG00000032614) #18	DVL1 (ENSMICG00000014215) #19	TAS1R3 (ENSMICG00000043203) #20	CPTP (ENSMICG00000041661) #21	INTS11 (ENSMICG00000014186) #22	PUSL1 (ENSMICG00000014171) #23	ACAP3 (ENSMICG00000034287) #24	UBE2J2 (ENSMICG00000014161) #26	C1QTNF12 (ENSMICG00000014149) #27	SDF4 (ENSMICG00000034258) #29	TNFRSF4 (ENSMICG00000044987) #30	TNFRSF18 (ENSMICG00000011296) #31	TTLL10 (ENSMICG00000011270) #32	C1orf159 (ENSMICG00000028602) #33	AGRN (ENSMICG00000013481) #35	ISG15 (ENSMICG00000028931) #36	HES4 (ENSMICG00000015660) #37	PERM1 (ENSMICG00000033997)	PLEKHN1 (ENSMICG00000037845)	KLHL17 (ENSMICG00000008300)
Bushbaby	MODERN SPECIES	182	MMP23B (ENSOGAG00000030219)	MIB2 (ENSOGAG00000030398)	FNDC10 (ENSOGAG00000032366)	SSU72 (ENSOGAG00000024430) #7	TMEM240 (ENSOGAG00000030103) #8	ATAD3A (ENSOGAG00000011947) #9	VWA1 (ENSOGAG00000025394) #12	TMEM88B (ENSOGAG00000032922) #13	MRPL20 (ENSOGAG00000005968) #15	ENSOGAG00000000469 #16	AURKAIP1 (ENSOGAG00000025917) #17	MXRA8 (ENSOGAG00000030763) #18	DVL1 (ENSOGAG00000030806) #19	TAS1R3 (ENSOGAG00000024988) #20	CPTP (ENSOGAG00000028544) #21	INTS11 (ENSOGAG00000000463) #22	PUSL1 (ENSOGAG00000031692) #23	ACAP3 (ENSOGAG00000028607) #24	ENSOGAG00000000462 #26	B3GALT6 (ENSOGAG00000027290) #28	SDF4 (ENSOGAG00000013399) #29	TNFRSF4 (ENSOGAG00000013397) #30	TNFRSF18 (ENSOGAG00000013393) #31	TTLL10 (ENSOGAG00000025539) #32	ENSOGAG00000031388 #33	RNF223 (ENSOGAG00000032911) #34	ENSOGAG00000014039 #35	ENSOGAG00000008421 #36	ENSOGAG00000032462	PLEKHN1 (ENSOGAG00000006947)	KLHL17 (ENSOGAG00000032685)
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Tree shrew	MODERN SPECIES	4065																INTS11 (ENSTBEG00000005377) #22	PUSL1 (ENSTBEG00000005001) #23	ACAP3 (ENSTBEG00000004486) #24	ENSTBEG00000004206 #25	UBE2J2 (ENSTBEG00000004044) #26	ENSTBEG00000004017 #27	B3GALT6 (ENSTBEG00000003631) #28
Glires	ANCESTRAL SPECIES		ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000165354 #11	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Rodentia	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00940000161187	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652
Guinea pig	MODERN SPECIES	184	ENSCPOG00000009457	MMP23B (ENSCPOG00000024407)	MIB2 (ENSCPOG00000025415)	ENSCPOG00000030624	SSU72 (ENSCPOG00000002238) #7	TMEM240 (ENSCPOG00000035205) #8	ATAD3A (ENSCPOG00000025060) #9	VWA1 (ENSCPOG00000021637) #12	MRPL20 (ENSCPOG00000023001) #15	CCNL2 (ENSCPOG00000008005) #16	AURKAIP1 (ENSCPOG00000027539) #17	MXRA8 (ENSCPOG00000023813) #18	DVL1 (ENSCPOG00000006849) #19	TAS1R3 (ENSCPOG00000006842) #20	CPTP (ENSCPOG00000037003) #21	INTS11 (ENSCPOG00000005152) #22	PUSL1 (ENSCPOG00000005149) #23	ACAP3 (ENSCPOG00000009895) #24	ENSCPOG00000011689 #25	UBE2J2 (ENSCPOG00000008025) #26	C1QTNF12 (ENSCPOG00000020208) #27	B3GALT6 (ENSCPOG00000026270) #28	SDF4 (ENSCPOG00000011687) #29	TNFRSF4 (ENSCPOG00000032915) #30	TNFRSF18 (ENSCPOG00000024995) #31	TTLL10 (ENSCPOG00000026364) #32	C1orf159 (ENSCPOG00000023519) #33	ENSCPOG00000035826	AGRN (ENSCPOG00000009046) #35	ISG15 (ENSCPOG00000013450) #36	ENSCPOG00000001121
Hystricomorpha_b	ANCESTRAL SPECIES	47	ENSGT00940000158459	ENSGT00940000161187	ENSGT00940000158097	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652	ENSGT00390000003618
Long-tailed chinchilla	MODERN SPECIES	193	ENSCLAG00000009196	MMP23B (ENSCLAG00000006747)	MIB2 (ENSCLAG00000014976)	SSU72 (ENSCLAG00000013921) #7	TMEM240 (ENSCLAG00000004451) #8	ATAD3A (ENSCLAG00000005088) #9	VWA1 (ENSCLAG00000007707) #12	TMEM88B (ENSCLAG00000009079) #13	ENSCLAG00000009757 #15	CCNL2 (ENSCLAG00000011337) #16	AURKAIP1 (ENSCLAG00000015774) #17	MXRA8 (ENSCLAG00000005340) #18	DVL1 (ENSCLAG00000006123) #19	TAS1R3 (ENSCLAG00000011780) #20	CPTP (ENSCLAG00000009572) #21	INTS11 (ENSCLAG00000004586) #22	PUSL1 (ENSCLAG00000005232) #23	ACAP3 (ENSCLAG00000007949) #24	UBE2J2 (ENSCLAG00000006776) #26	C1QTNF12 (ENSCLAG00000008319) #27	B3GALT6 (ENSCLAG00000010125) #28	SDF4 (ENSCLAG00000012579) #29	TNFRSF4 (ENSCLAG00000010791) #30	TNFRSF18 (ENSCLAG00000012574) #31	ENSCLAG00000008793 #32	C1orf159 (ENSCLAG00000007074) #33	RNF223 (ENSCLAG00000008086) #34	AGRN (ENSCLAG00000010553) #35	ISG15 (ENSCLAG00000007805) #36	ENSCLAG00000004628	PLEKHN1 (ENSCLAG00000005616)
Degu	MODERN SPECIES	154	ENSODEG00000009109	ENSODEG00000008784	ENSODEG00000019880	ENSODEG00000011387 #7	TMEM240 (ENSODEG00000010456) #8	ATAD3A (ENSODEG00000009657) #9	VWA1 (ENSODEG00000008967) #12	TMEM88B (ENSODEG00000009276) #13	MRPL20 (ENSODEG00000010734) #15	ENSODEG00000008816 #16	AURKAIP1 (ENSODEG00000008719) #17	MXRA8 (ENSODEG00000011254) #18	DVL1 (ENSODEG00000009749) #19	TAS1R3 (ENSODEG00000008890) #20	CPTP (ENSODEG00000008044) #21	INTS11 (ENSODEG00000009761) #22	PUSL1 (ENSODEG00000008247) #23	ACAP3 (ENSODEG00000008249) #24	UBE2J2 (ENSODEG00000007876) #26	C1QTNF12 (ENSODEG00000008805) #27	B3GALT6 (ENSODEG00000008567) #28	SDF4 (ENSODEG00000010985) #29	TNFRSF4 (ENSODEG00000008108) #30	TNFRSF18 (ENSODEG00000007932) #31	TTLL10 (ENSODEG00000010677) #32	C1orf159 (ENSODEG00000008028) #33	AGRN (ENSODEG00000011082) #35	ISG15 (ENSODEG00000007979) #36	ENSODEG00000007575	PLEKHN1 (ENSODEG00000008094)	KLHL17 (ENSODEG00000007672)
Naked mole-rat female	MODERN SPECIES	26	FNDC10 (ENSHGLG00000032397)	ENSHGLG00000033897	SSU72 (ENSHGLG00000018633) #7	TMEM240 (ENSHGLG00000017381) #8	ATAD3A (ENSHGLG00000017393) #9	VWA1 (ENSHGLG00000017400) #12	TMEM88B (ENSHGLG00000047158) #13	ANKRD65 (ENSHGLG00000017529) #14	MRPL20 (ENSHGLG00000032931) #15	ENSHGLG00000017546 #16	AURKAIP1 (ENSHGLG00000015312) #17	MXRA8 (ENSHGLG00000015323) #18	DVL1 (ENSHGLG00000015329) #19	TAS1R3 (ENSHGLG00000015340) #20	CPTP (ENSHGLG00000015345) #21	INTS11 (ENSHGLG00000017561) #22	PUSL1 (ENSHGLG00000017570) #23	ENSHGLG00000018490 #25	UBE2J2 (ENSHGLG00000046110) #26	C1QTNF12 (ENSHGLG00000003615) #27	B3GALT6 (ENSHGLG00000041571) #28	SDF4 (ENSHGLG00000003849) #29	TNFRSF4 (ENSHGLG00000003947) #30	TNFRSF18 (ENSHGLG00000004048) #31	ENSHGLG00000004156 #32	C1orf159 (ENSHGLG00000004242) #33	RNF223 (ENSHGLG00000004312) #34	ENSHGLG00000005411	ISG15 (ENSHGLG00000044356) #36	ENSHGLG00000039244	PLEKHN1 (ENSHGLG00000006118)
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Marmotini	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Alpin marmot	MODERN SPECIES	73	NADK (ENSMMMG00000019153)	SLC35E2B (ENSMMMG00000019163)	ENSMMMG00000019177	MIB2 (ENSMMMG00000019966)	ENSMMMG00000020051 #7	ENSMMMG00000020057	ATAD3A (ENSMMMG00000020062) #9	VWA1 (ENSMMMG00000020087) #12	ENSMMMG00000020093 #14	ENSMMMG00000020095	CCNL2 (ENSMMMG00000020112) #16	AURKAIP1 (ENSMMMG00000020118) #17	DVL1 (ENSMMMG00000020124) #19	TAS1R3 (ENSMMMG00000020135) #20	CPTP (ENSMMMG00000020146) #21	INTS11 (ENSMMMG00000020151) #22	PUSL1 (ENSMMMG00000020168) #23	ACAP3 (ENSMMMG00000020193) #24	ENSMMMG00000020944 #25	UBE2J2 (ENSMMMG00000020952) #26	C1QTNF12 (ENSMMMG00000020956) #27	SDF4 (ENSMMMG00000020968) #29	ENSMMMG00000020974 #30	TNFRSF18 (ENSMMMG00000020980) #31	ENSMMMG00000020987 #32	C1orf159 (ENSMMMG00000020997) #33	RNF223 (ENSMMMG00000021024) #34	AGRN (ENSMMMG00000021033) #35	ISG15 (ENSMMMG00000021347) #36	ENSMMMG00000021350	PLEKHN1 (ENSMMMG00000021351)
Marmotini_b	ANCESTRAL SPECIES	81	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37	ENSGT00390000017652
Arctic ground squirrel	MODERN SPECIES	638	MIB2 (ENSUPAG00010016514)	FNDC10 (ENSUPAG00010016503)	ENSUPAG00010016500 #7	TMEM240 (ENSUPAG00010016492) #8	ATAD3A (ENSUPAG00010016454) #9	VWA1 (ENSUPAG00010016443) #12	TMEM88B (ENSUPAG00010016433) #13	ANKRD65 (ENSUPAG00010016428) #14	MRPL20 (ENSUPAG00010016402) #15	CCNL2 (ENSUPAG00010016359) #16	AURKAIP1 (ENSUPAG00010016333) #17	MXRA8 (ENSUPAG00010016318) #18	DVL1 (ENSUPAG00010016306) #19	TAS1R3 (ENSUPAG00010016288) #20	CPTP (ENSUPAG00010016277) #21	INTS11 (ENSUPAG00010016221) #22	PUSL1 (ENSUPAG00010016212) #23	ACAP3 (ENSUPAG00010016178) #24	UBE2J2 (ENSUPAG00010016131) #26	C1QTNF12 (ENSUPAG00010016122) #27	B3GALT6 (ENSUPAG00010016115) #28	SDF4 (ENSUPAG00010016084) #29	TNFRSF4 (ENSUPAG00010016055) #30	TNFRSF18 (ENSUPAG00010016053) #31	TTLL10 (ENSUPAG00010016013) #32	C1orf159 (ENSUPAG00010015973) #33	RNF223 (ENSUPAG00010015971) #34	AGRN (ENSUPAG00010015666) #35	ISG15 (ENSUPAG00010015648) #36	HES4 (ENSUPAG00010015613) #37	ENSUPAG00010015602
Squirrel	MODERN SPECIES	337	GNB1 (ENSSTOG00000010522)	ENSSTOG00000012783	SLC35E2B (ENSSTOG00000020174)	ENSSTOG00000024470	MMP23B (ENSSTOG00000020131)	ENSSTOG00000030797	ENSSTOG00000002960 #7	ATAD3A (ENSSTOG00000022939) #9	VWA1 (ENSSTOG00000023469) #12	CCNL2 (ENSSTOG00000001826) #16	AURKAIP1 (ENSSTOG00000034496) #17	MXRA8 (ENSSTOG00000001815) #18	DVL1 (ENSSTOG00000013023) #19	TAS1R3 (ENSSTOG00000013015) #20	CPTP (ENSSTOG00000024154) #21	INTS11 (ENSSTOG00000020019) #22	PUSL1 (ENSSTOG00000001783) #23	ACAP3 (ENSSTOG00000028134) #24	UBE2J2 (ENSSTOG00000001777) #26	C1QTNF12 (ENSSTOG00000001771) #27	B3GALT6 (ENSSTOG00000029209) #28	SDF4 (ENSSTOG00000027911) #29	AGRN (ENSSTOG00000015318) #35	KLHL17 (ENSSTOG00000014357)	NOC2L (ENSSTOG00000009911)
Eurasian red squirrel	MODERN SPECIES		MIB2 (ENSSVLG00005000038)	FNDC10 (ENSSVLG00005000037)	ENSSVLG00005000036 #7	TMEM240 (ENSSVLG00005000035) #8	ATAD3C (ENSSVLG00005000034) #11	VWA1 (ENSSVLG00005000033) #12	TMEM88B (ENSSVLG00005000032) #13	ANKRD65 (ENSSVLG00005000031) #14	MRPL20 (ENSSVLG00005000030) #15	CCNL2 (ENSSVLG00005000029) #16	AURKAIP1 (ENSSVLG00005000028) #17	MXRA8 (ENSSVLG00005000027) #18	DVL1 (ENSSVLG00005000026) #19	TAS1R3 (ENSSVLG00005000025) #20	CPTP (ENSSVLG00005000024) #21	INTS11 (ENSSVLG00005000023) #22	ENSSVLG00005000022 #23	ACAP3 (ENSSVLG00005000021) #24	UBE2J2 (ENSSVLG00005000020) #26	C1QTNF12 (ENSSVLG00005000019) #27	B3GALT6 (ENSSVLG00005000018) #28	SDF4 (ENSSVLG00005000017) #29	TNFRSF4 (ENSSVLG00005000016) #30	ENSSVLG00005000015 #31	TTLL10 (ENSSVLG00005000014) #32	C1orf159 (ENSSVLG00005000013) #33	RNF223 (ENSSVLG00005000012) #34	AGRN (ENSSVLG00005000011) #35	ISG15 (ENSSVLG00005000010) #36	HES4 (ENSSVLG00005000009) #37	ENSSVLG00005000008
Rodentia_B	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652	ENSGT00390000003618
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173.v #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652	ENSGT00390000003618
Muroidea	ANCESTRAL SPECIES	3	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173.v #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652	ENSGT00390000003618
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173.v #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652	ENSGT00390000003618
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173.v #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652	ENSGT00390000003618
Cricetidae_B	ANCESTRAL SPECIES	30	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173.v #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652	ENSGT00390000003618
Northern American deer mouse	MODERN SPECIES	11	Mib2 (ENSPEMG00000018893)	Fndc10 (ENSPEMG00000007284)	Ssu72 (ENSPEMG00000012077) #7	Tmem240 (ENSPEMG00000007684) #8	Atad3a (ENSPEMG00000002430) #9	Vwa1 (ENSPEMG00000006440) #12	Tmem88b (ENSPEMG00000025744) #13	Ankrd65 (ENSPEMG00000014327) #14	ENSPEMG00000026487 #15	Ccnl2 (ENSPEMG00000011619) #16	Aurkaip1 (ENSPEMG00000018318) #17	Mxra8 (ENSPEMG00000006702) #18	Dvl1 (ENSPEMG00000010505) #19	Tas1r3 (ENSPEMG00000018504) #20	Cptp (ENSPEMG00000030698) #21	Ints11 (ENSPEMG00000018526) #22	Pusl1 (ENSPEMG00000013541) #23	Ube2j2 (ENSPEMG00000004212) #26	C1qtnf12 (ENSPEMG00000028990) #27	B3galt6 (ENSPEMG00000005781) #28	Sdf4 (ENSPEMG00000010425) #29	Tnfrsf4 (ENSPEMG00000016672) #30	ENSPEMG00000006287 #31	Ttll10 (ENSPEMG00000017651) #32	9430015G10Rik (ENSPEMG00000019038) #33	Rnf223 (ENSPEMG00000019048) #34	Isg15 (ENSPEMG00000002586) #36	Perm1 (ENSPEMG00000015615)	Plekhn1 (ENSPEMG00000013324)	Klhl17 (ENSPEMG00000018042)	Noc2l (ENSPEMG00000010309)
Prairie vole	MODERN SPECIES	121	Mib2 (ENSMOCG00000008688)	Fndc10 (ENSMOCG00000007382)	Ssu72 (ENSMOCG00000012848) #7	Tmem240 (ENSMOCG00000018287) #8	Atad3a (ENSMOCG00000021547) #9	Vwa1 (ENSMOCG00000000064) #12	Tmem88b (ENSMOCG00000008629) #13	Ankrd65 (ENSMOCG00000014433) #14	ENSMOCG00000000404 #15	ENSMOCG00000021504 #16	Aurkaip1 (ENSMOCG00000021481) #17	Mxra8 (ENSMOCG00000016563) #18	Dvl1 (ENSMOCG00000012376) #19	Tas1r3 (ENSMOCG00000002937) #20	Cptp (ENSMOCG00000012547) #21	Ints11 (ENSMOCG00000021304) #22	Pusl1 (ENSMOCG00000005602) #23	Acap3 (ENSMOCG00000004785) #24	Ube2j2 (ENSMOCG00000022842) #26	C1qtnf12 (ENSMOCG00000001223) #27	B3galt6 (ENSMOCG00000003378) #28	Sdf4 (ENSMOCG00000020472) #29	Tnfrsf4 (ENSMOCG00000014002) #30	ENSMOCG00000007518 #31	Ttll10 (ENSMOCG00000011403) #32	9430015G10Rik (ENSMOCG00000019622) #33	Rnf223 (ENSMOCG00000016011) #34	Agrn (ENSMOCG00000012176) #35	Isg15 (ENSMOCG00000012288) #36	Perm1 (ENSMOCG00000003897)	Plekhn1 (ENSMOCG00000001734)
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173.v #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652	ENSGT00390000003618
Golden Hamster	MODERN SPECIES	707	ENSMAUG00000002980	Slc35e2 (ENSMAUG00000001841)	ENSMAUG00000013372	Mib2 (ENSMAUG00000018714)	Ssu72 (ENSMAUG00000009985) #7	Tmem240 (ENSMAUG00000021989) #8	Vwa1 (ENSMAUG00000003568) #12	Ankrd65 (ENSMAUG00000016130) #14	Mrpl20 (ENSMAUG00000013299) #15	ENSMAUG00000006536 #16	Aurkaip1 (ENSMAUG00000001609) #17	Mxra8 (ENSMAUG00000002259) #18	Dvl1 (ENSMAUG00000020563) #19	Tas1r3 (ENSMAUG00000001302) #20	Cptp (ENSMAUG00000017271) #21	Ints11 (ENSMAUG00000010199) #22	Pusl1 (ENSMAUG00000019924) #23	Acap3 (ENSMAUG00000014585) #24	Ube2j2 (ENSMAUG00000011460) #26	C1qtnf12 (ENSMAUG00000018438) #27	B3galt6 (ENSMAUG00000009166) #28	Sdf4 (ENSMAUG00000009571) #29	Tnfrsf4 (ENSMAUG00000021374) #30	ENSMAUG00000020726 #31	Ttll10 (ENSMAUG00000011977) #32	9430015G10Rik (ENSMAUG00000000990) #33	Rnf223 (ENSMAUG00000007962) #34	Agrn (ENSMAUG00000011047) #35	Isg15 (ENSMAUG00000009426) #36	Perm1 (ENSMAUG00000021450)	Plekhn1 (ENSMAUG00000020208)
Chinese hamster chok1gshd	MODERN SPECIES	111	Mib2 (ENSCGRG00001021150)	Fndc10 (ENSCGRG00001012937)	Ssu72 (ENSCGRG00001017443) #7	Tmem240 (ENSCGRG00001016338) #8	Atad3a (ENSCGRG00001014856) #9	Vwa1 (ENSCGRG00001014078) #12	Tmem88b (ENSCGRG00001001876) #13	Ankrd65 (ENSCGRG00001000448) #14	Mrpl20 (ENSCGRG00001024028) #15	Ccnl2 (ENSCGRG00001017635) #16	Aurkaip1 (ENSCGRG00001017030) #17	Mxra8 (ENSCGRG00001016415) #18	Dvl1 (ENSCGRG00001010717) #19	Tas1r3 (ENSCGRG00001003544) #20	Cptp (ENSCGRG00001006839) #21	Ints11 (ENSCGRG00001013448) #22	Pusl1 (ENSCGRG00001012429) #23	Acap3 (ENSCGRG00001008691) #24	Ube2j2 (ENSCGRG00001023010) #26	C1qtnf12 (ENSCGRG00001005524) #27	B3galt6 (ENSCGRG00001012603) #28	Tnfrsf4 (ENSCGRG00001001743) #30	Tnfrsf18 (ENSCGRG00001024877) #31	Ttll10 (ENSCGRG00001015535) #32	9430015G10Rik (ENSCGRG00001013668) #33	Rnf223 (ENSCGRG00001010751) #34	Agrn (ENSCGRG00001020606) #35	Isg15 (ENSCGRG00001022079) #36	Perm1 (ENSCGRG00001021606)	Plekhn1 (ENSCGRG00001019444)	Klhl17 (ENSCGRG00001015335)
Murinae	ANCESTRAL SPECIES	2	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173.v #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652	ENSGT00390000003618
Mus	ANCESTRAL SPECIES	3	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173.v #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652	ENSGT00390000003618
Mus_A	ANCESTRAL SPECIES	3	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173.v #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652	ENSGT00390000003618
Mus_B	ANCESTRAL SPECIES	5	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173.v #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652	ENSGT00390000003618
Mouse	MODERN SPECIES	13	Mib2 (ENSMUSG00000029060)	Fndc10 (ENSMUSG00000074738)	Ssu72 (ENSMUSG00000029038) #7	Tmem240 (ENSMUSG00000084845) #8	Atad3a (ENSMUSG00000029036) #9	Vwa1 (ENSMUSG00000042116) #12	Tmem88b (ENSMUSG00000073680) #13	Ankrd65 (ENSMUSG00000078487) #14	Mrpl20 (ENSMUSG00000029066) #15	Ccnl2 (ENSMUSG00000029068) #16	Aurkaip1 (ENSMUSG00000065990) #17	Mxra8 (ENSMUSG00000029070) #18	Dvl1 (ENSMUSG00000029071) #19	Tas1r3 (ENSMUSG00000029072) #20	Cptp (ENSMUSG00000029073) #21	Ints11 (ENSMUSG00000029034) #22	Pusl1 (ENSMUSG00000051557) #23	Acap3 (ENSMUSG00000029033) #24	Ube2j2 (ENSMUSG00000023286) #26	C1qtnf12 (ENSMUSG00000023571) #27	B3galt6 (ENSMUSG00000050796) #28	Sdf4 (ENSMUSG00000029076) #29	Tnfrsf4 (ENSMUSG00000029075) #30	Tnfrsf18 (ENSMUSG00000041954) #31	Ttll10 (ENSMUSG00000029074) #32	9430015G10Rik (ENSMUSG00000059939) #33	Rnf223 (ENSMUSG00000110404) #34	Agrn (ENSMUSG00000041936) #35	Isg15 (ENSMUSG00000035692) #36	Perm1 (ENSMUSG00000078486)	Plekhn1 (ENSMUSG00000078485)
Mus_C	ANCESTRAL SPECIES	2	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173.v #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652	ENSGT00390000003618
Steppe mouse	MODERN SPECIES	2648	Ssu72 (ENSMSIG00000014790) #7	ENSMSIG00000014839 #8	Atad3a (ENSMSIG00000014873) #9	ENSMSIG00000014900	Vwa1 (ENSMSIG00000014906) #12	Tmem88b (ENSMSIG00000014920) #13	Ankrd65 (ENSMSIG00000014934) #14	Mrpl20 (ENSMSIG00000014960) #15	Ccnl2 (ENSMSIG00000015051) #16	Aurkaip1 (ENSMSIG00000015106) #17	ENSMSIG00000015126	Mxra8 (ENSMSIG00000015130) #18	Dvl1 (ENSMSIG00000015171) #19	Tas1r3 (ENSMSIG00000015211) #20	Cptp (ENSMSIG00000015228) #21	ENSMSIG00000015231 #22	Pusl1 (ENSMSIG00000015297) #23	Acap3 (ENSMSIG00000015318) #24	Ube2j2 (ENSMSIG00000015483) #26	C1qtnf12 (ENSMSIG00000015605) #27	B3galt6 (ENSMSIG00000015633) #28	Sdf4 (ENSMSIG00000015642) #29	Tnfrsf4 (ENSMSIG00000015714) #30	Tnfrsf18 (ENSMSIG00000015755) #31	Ttll10 (ENSMSIG00000015817) #32	ENSMSIG00000015902 #33	Rnf223 (ENSMSIG00000015925) #34	Agrn (ENSMSIG00000015947) #35	Isg15 (ENSMSIG00000016286) #36	Perm1 (ENSMSIG00000016299)	Plekhn1 (ENSMSIG00000016314)
spretus	MODERN SPECIES	13	Mib2 (MGP_SPRETEiJ_G0027890)	Fndc10 (MGP_SPRETEiJ_G0027891)	Ssu72 (MGP_SPRETEiJ_G0027892) #7	Tmem240 (MGP_SPRETEiJ_G0027893) #8	Atad3a (MGP_SPRETEiJ_G0027894) #9	Vwa1 (MGP_SPRETEiJ_G0027895) #12	Tmem88b (MGP_SPRETEiJ_G0027896) #13	Ankrd65 (MGP_SPRETEiJ_G0027897) #14	Mrpl20 (MGP_SPRETEiJ_G0027898) #15	Ccnl2 (MGP_SPRETEiJ_G0027899) #16	Aurkaip1 (MGP_SPRETEiJ_G0027900) #17	Mxra8 (MGP_SPRETEiJ_G0027901) #18	Dvl1 (MGP_SPRETEiJ_G0027902) #19	Tas1r3 (MGP_SPRETEiJ_G0027903) #20	Cptp (MGP_SPRETEiJ_G0027904) #21	Ints11 (MGP_SPRETEiJ_G0027905) #22	Pusl1 (MGP_SPRETEiJ_G0027906) #23	Acap3 (MGP_SPRETEiJ_G0027907) #24	Ube2j2 (MGP_SPRETEiJ_G0027908) #26	C1qtnf12 (MGP_SPRETEiJ_G0027909) #27	B3galt6 (MGP_SPRETEiJ_G0027910) #28	Sdf4 (MGP_SPRETEiJ_G0027911) #29	Tnfrsf4 (MGP_SPRETEiJ_G0027912) #30	MGP_SPRETEiJ_G0027913 #31	Ttll10 (MGP_SPRETEiJ_G0027914) #32	9430015G10Rik (MGP_SPRETEiJ_G0027915) #33	Agrn (MGP_SPRETEiJ_G0027916) #35	Isg15 (MGP_SPRETEiJ_G0027917) #36	Perm1 (MGP_SPRETEiJ_G0027918)	Plekhn1 (MGP_SPRETEiJ_G0027919)	Klhl17 (MGP_SPRETEiJ_G0027920)
Ryukyu mouse	MODERN SPECIES	13	Mmp23 (MGP_CAROLIEiJ_G0026895)	Mib2 (MGP_CAROLIEiJ_G0026896)	Fndc10 (MGP_CAROLIEiJ_G0026897)	Ssu72 (MGP_CAROLIEiJ_G0026898) #7	Tmem240 (MGP_CAROLIEiJ_G0026899) #8	Atad3a (MGP_CAROLIEiJ_G0026900) #9	Vwa1 (MGP_CAROLIEiJ_G0026901) #12	Tmem88b (MGP_CAROLIEiJ_G0026902) #13	MGP_CAROLIEiJ_G0026903 #14	Mrpl20 (MGP_CAROLIEiJ_G0026904) #15	Ccnl2 (MGP_CAROLIEiJ_G0026905) #16	Aurkaip1 (MGP_CAROLIEiJ_G0026906) #17	Mxra8 (MGP_CAROLIEiJ_G0026907) #18	Dvl1 (MGP_CAROLIEiJ_G0026908) #19	Tas1r3 (MGP_CAROLIEiJ_G0026909) #20	Ints11 (MGP_CAROLIEiJ_G0026910) #22	Pusl1 (MGP_CAROLIEiJ_G0026911) #23	Acap3 (MGP_CAROLIEiJ_G0026912) #24	Ube2j2 (MGP_CAROLIEiJ_G0026913) #26	C1qtnf12 (MGP_CAROLIEiJ_G0026914) #27	B3galt6 (MGP_CAROLIEiJ_G0026915) #28	Sdf4 (MGP_CAROLIEiJ_G0026916) #29	Tnfrsf4 (MGP_CAROLIEiJ_G0026917) #30	MGP_CAROLIEiJ_G0026918 #31	Ttll10 (MGP_CAROLIEiJ_G0026919) #32	9430015G10Rik (MGP_CAROLIEiJ_G0026920) #33	Agrn (MGP_CAROLIEiJ_G0026921) #35	Isg15 (MGP_CAROLIEiJ_G0026922) #36	Perm1 (MGP_CAROLIEiJ_G0026923)	Plekhn1 (MGP_CAROLIEiJ_G0026924)	Klhl17 (MGP_CAROLIEiJ_G0026925)
Shrew mouse	MODERN SPECIES	19	Mib2 (MGP_PahariEiJ_G0029244)	Fndc10 (MGP_PahariEiJ_G0029245)	Ssu72 (MGP_PahariEiJ_G0029246) #7	Tmem240 (MGP_PahariEiJ_G0029247) #8	Atad3a (MGP_PahariEiJ_G0029248) #9	Vwa1 (MGP_PahariEiJ_G0029249) #12	Tmem88b (MGP_PahariEiJ_G0029250) #13	Ankrd65 (MGP_PahariEiJ_G0029251) #14	Mrpl20 (MGP_PahariEiJ_G0029252) #15	Ccnl2 (MGP_PahariEiJ_G0029253) #16	Aurkaip1 (MGP_PahariEiJ_G0029254) #17	Mxra8 (MGP_PahariEiJ_G0029255) #18	Dvl1 (MGP_PahariEiJ_G0029256) #19	Tas1r3 (MGP_PahariEiJ_G0029257) #20	Cptp (MGP_PahariEiJ_G0029258) #21	Ints11 (MGP_PahariEiJ_G0029259) #22	Pusl1 (MGP_PahariEiJ_G0029260) #23	Acap3 (MGP_PahariEiJ_G0029261) #24	Ube2j2 (MGP_PahariEiJ_G0029262) #26	C1qtnf12 (MGP_PahariEiJ_G0029263) #27	B3galt6 (MGP_PahariEiJ_G0029264) #28	Sdf4 (MGP_PahariEiJ_G0029265) #29	Tnfrsf4 (MGP_PahariEiJ_G0029266) #30	MGP_PahariEiJ_G0029267 #31	Ttll10 (MGP_PahariEiJ_G0029268) #32	9430015G10Rik (MGP_PahariEiJ_G0029269) #33	Agrn (MGP_PahariEiJ_G0029270) #35	Isg15 (MGP_PahariEiJ_G0029271) #36	Perm1 (MGP_PahariEiJ_G0029272)	Plekhn1 (MGP_PahariEiJ_G0029273)	Klhl17 (MGP_PahariEiJ_G0029274)
Rat	MODERN SPECIES	15	Mib2 (ENSRNOG00000017564)	ENSRNOG00000065253	LOC100364191 (ENSRNOG00000030447)	Ssu72 (ENSRNOG00000017829) #7	Tmem240 (ENSRNOG00000066137) #8	Atad3a (ENSRNOG00000018118) #9	Vwa1 (ENSRNOG00000018338) #12	Tmem88b (ENSRNOG00000036869) #13	Ankrd65 (ENSRNOG00000043331) #14	Mrpl20 (ENSRNOG00000018647) #15	Ccnl2 (ENSRNOG00000018691) #16	Mxra8 (ENSRNOG00000019244) #18	Dvl1 (ENSRNOG00000019423) #19	Tas1r3 (ENSRNOG00000019589) #20	Cptp (ENSRNOG00000022455) #21	Ints11 (ENSRNOG00000019712) #22	Pusl1 (ENSRNOG00000022354) #23	Acap3 (ENSRNOG00000022307) #24	Ube2j2 (ENSRNOG00000019749) #26	C1qtnf12 (ENSRNOG00000019864) #27	B3galt6 (ENSRNOG00000019979) #28	Sdf4 (ENSRNOG00000019981) #29	Tnfrsf4 (ENSRNOG00000020106) #30	Tnfrsf18 (ENSRNOG00000022012) #31	Ttll10 (ENSRNOG00000020132) #32	C5h1orf159 (ENSRNOG00000020199) #33	Rnf223 (ENSRNOG00000036856) #34	Agrn (ENSRNOG00000020205) #35	Isg15 (ENSRNOG00000069527) #36	Perm1 (ENSRNOG00000020244)	Plekhn1 (ENSRNOG00000020295)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1641	Mmp23 (ENSNGAG00000017062)	Mib2 (ENSNGAG00000011411)	Ssu72 (ENSNGAG00000008923) #7	Tmem240 (ENSNGAG00000005864) #8	Atad3a (ENSNGAG00000002587) #9	Vwa1 (ENSNGAG00000023138) #12	Tmem88b (ENSNGAG00000022863) #13	Ankrd65 (ENSNGAG00000022406) #14	Mrpl20 (ENSNGAG00000021688) #15	Ccnl2 (ENSNGAG00000020816) #16	Aurkaip1 (ENSNGAG00000018898) #17	Mxra8 (ENSNGAG00000018197) #18	Dvl1 (ENSNGAG00000017318) #19	Tas1r3 (ENSNGAG00000016370) #20	Cptp (ENSNGAG00000015600) #21	Ints11 (ENSNGAG00000010139) #22	Pusl1 (ENSNGAG00000004647) #23	Acap3 (ENSNGAG00000023232) #24	Ube2j2 (ENSNGAG00000021575) #26	C1qtnf12 (ENSNGAG00000020156) #27	B3galt6 (ENSNGAG00000011015) #28	Sdf4 (ENSNGAG00000018723) #29	Tnfrsf4 (ENSNGAG00000016820) #30	ENSNGAG00000011810 #31	Ttll10 (ENSNGAG00000021396) #32	9430015G10Rik (ENSNGAG00000017995) #33	Rnf223 (ENSNGAG00000020782) #34	Agrn (ENSNGAG00000017015) #35	Isg15 (ENSNGAG00000004599) #36	Perm1 (ENSNGAG00000010138)	Plekhn1 (ENSNGAG00000019117)
Lesser Egyptian jerboa	MODERN SPECIES	63	Mmp23 (ENSJJAG00000022020)	Mib2 (ENSJJAG00000020618)	Fndc10 (ENSJJAG00000020558)	Ssu72 (ENSJJAG00000009394) #7	Tmem240 (ENSJJAG00000018935) #8	Atad3a (ENSJJAG00000018589) #9	Vwa1 (ENSJJAG00000018254) #12	Ankrd65 (ENSJJAG00000021016) #14	Mrpl20 (ENSJJAG00000020728) #15	ENSJJAG00000018923 #16	Aurkaip1 (ENSJJAG00000019962) #17	Mxra8 (ENSJJAG00000018780) #18	Dvl1 (ENSJJAG00000023615) #19	Tas1r3 (ENSJJAG00000019939) #20	Cptp (ENSJJAG00000020740) #21	Ints11 (ENSJJAG00000008717) #22	Pusl1 (ENSJJAG00000020471) #23	Acap3 (ENSJJAG00000020949) #24	ENSJJAG00000020178 #26	C1qtnf12 (ENSJJAG00000020806) #27	B3galt6 (ENSJJAG00000006259) #28	Sdf4 (ENSJJAG00000020449) #29	Tnfrsf4 (ENSJJAG00000021313) #30	ENSJJAG00000021086 #31	Ttll10 (ENSJJAG00000020850) #32	9430015G10Rik (ENSJJAG00000021167) #33	Agrn (ENSJJAG00000022963) #35	Isg15 (ENSJJAG00000022686) #36	Perm1 (ENSJJAG00000023504)	Plekhn1 (ENSJJAG00000022195)	Klhl17 (ENSJJAG00000020600)
Kangaroo rat	MODERN SPECIES	341															Cptp (ENSDORG00000026629) #21	Ints11 (ENSDORG00000002045) #22	Acap3 (ENSDORG00000002616) #24	Ube2j2 (ENSDORG00000014331) #26	C1qtnf12 (ENSDORG00000016731) #27	ENSDORG00000010850 #29	ENSDORG00000023204 #31	ENSDORG00000010851 #30	ENSDORG00000014808 #32	9430015G10Rik (ENSDORG00000000784) #33	Agrn (ENSDORG00000008599) #35	ENSDORG00000028250	Plekhn1 (ENSDORG00000013749)	ENSDORG00000013747	Noc2l (ENSDORG00000013746)	ENSDORG00000013744	ENSDORG00000025400
Lagomorpha	ANCESTRAL SPECIES	529															ENSGT00940000161763 #21	ENSGT00940000157644 #22
Pika	MODERN SPECIES	910															CPTP (ENSOPRG00000018907) #21	ENSOPRG00000001794 #22
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000167742 #10	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Eulipotyphla	ANCESTRAL SPECIES	288														ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000157644 #22	ENSGT00950000183160.C #23
Hedgehog	MODERN SPECIES	6507															ENSEEUG00000000840 #19	INTS11 (ENSEEUG00000000838) #22	PUSL1 (ENSEEUG00000000837) #23
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00910000148136	ENSGT00940000167742 #10	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Artiodactyla	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Suina	ANCESTRAL SPECIES	10	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00910000147197	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Chacoan peccary	MODERN SPECIES	75	MIB2 (ENSCWAG00000013345)	FNDC10 (ENSCWAG00000013323)	ENSCWAG00000013287 ##7	TMEM240 (ENSCWAG00000013223) #8	ATAD3A (ENSCWAG00000013080) #9	VWA1 (ENSCWAG00000013041) #12	TMEM88B (ENSCWAG00000013001) #13	ENSCWAG00000012963	MRPL20 (ENSCWAG00000012928) #15	CCNL2 (ENSCWAG00000012817) #16	AURKAIP1 (ENSCWAG00000012776) #17	MXRA8 (ENSCWAG00000012692) #18	DVL1 (ENSCWAG00000012629) #19	TAS1R3 (ENSCWAG00000012544) #20	CPTP (ENSCWAG00000012526) #21	INTS11 (ENSCWAG00000012373) #22	PUSL1 (ENSCWAG00000012316) #23	ACAP3 (ENSCWAG00000012201) #24	UBE2J2 (ENSCWAG00000011638) #26	C1QTNF12 (ENSCWAG00000011563) #27	B3GALT6 (ENSCWAG00000011542) #28	SDF4 (ENSCWAG00000011463) #29	TNFRSF4 (ENSCWAG00000011384) #30	ENSCWAG00000011339 #31
Pig	MODERN SPECIES	14	MIB2 (ENSSSCG00000003350)	FNDC10 (ENSSSCG00000053115)	ENSSSCG00000003348 ##7	TMEM240 (ENSSSCG00000038530) #8	ATAD3A (ENSSSCG00000003343) #9	VWA1 (ENSSSCG00000003344) #12	TMEM88B (ENSSSCG00000034013) #13	ENSSSCG00000003346	MRPL20 (ENSSSCG00000033374) #15	CCNL2 (ENSSSCG00000003354) #16	AURKAIP1 (ENSSSCG00000038474) #17	ENSSSCG00000050561	MXRA8 (ENSSSCG00000021880) #18	DVL1 (ENSSSCG00000003342) #19	TAS1R3 (ENSSSCG00000003341) #20	INTS11 (ENSSSCG00000003339) #22	PUSL1 (ENSSSCG00000003338) #23	ACAP3 (ENSSSCG00000003329) #24	ENSSSCG00000027991 #25	UBE2J2 (ENSSSCG00000003334) #26	C1QTNF12 (ENSSSCG00000003333) #27	B3GALT6 (ENSSSCG00000022151) #28	SDF4 (ENSSSCG00000003332) #29	TNFRSF4 (ENSSSCG00000003331) #30	TNFRSF18 (ENSSSCG00000038351) #31	TTLL10 (ENSSSCG00000003336) #32	ENSSSCG00000032231 #33	RNF223 (ENSSSCG00000034107) #34	ENSSSCG00000026816	AGRN (ENSSSCG00000022204) #35	ISG15 (ENSSSCG00000040575) #36
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Camelidae	ANCESTRAL SPECIES	3	ENSGT00940000161187	ENSGT00940000158097	ENSGT00390000010165.i.b.a.a.a ##7	ENSGT00950000185678	ENSGT00730000111059 #9	ENSGT00910000148136	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37	ENSGT00390000017652
Alpaca	MODERN SPECIES	259																ENSVPAG00000005134 #22
Arabian camel	MODERN SPECIES	4	MMP23B (ENSCDRG00005007328)	MIB2 (ENSCDRG00005007131)	ENSCDRG00005006885 ##7	ENSCDRG00005006844	ATAD3A (ENSCDRG00005006790) #9	ENSCDRG00005006760	ENSCDRG00005006743 #13	ENSCDRG00005006686 #14	MRPL20 (ENSCDRG00005006624) #15	CCNL2 (ENSCDRG00005006396) #16	AURKAIP1 (ENSCDRG00005006338) #17	MXRA8 (ENSCDRG00005006194) #18	DVL1 (ENSCDRG00005006159) #19	TAS1R3 (ENSCDRG00005006118) #20	CPTP (ENSCDRG00005006099) #21	INTS11 (ENSCDRG00005005954) #22	PUSL1 (ENSCDRG00005005911) #23	ACAP3 (ENSCDRG00005005738) #24	UBE2J2 (ENSCDRG00005005696) #26	C1QTNF12 (ENSCDRG00005005677) #27	SDF4 (ENSCDRG00005005588) #29	TNFRSF4 (ENSCDRG00005005562) #30	TNFRSF18 (ENSCDRG00005005545) #31	ENSCDRG00005005459 #32	C1orf159 (ENSCDRG00005005430) #33	RNF223 (ENSCDRG00005005421) #34	ENSCDRG00005005017	AGRN (ENSCDRG00005004891) #35	ISG15 (ENSCDRG00005004866) #36	HES4 (ENSCDRG00005004825) #37	PERM1 (ENSCDRG00005004804)
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Cetacea	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Odontoceti	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802.a #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802.a #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Monodontidae	ANCESTRAL SPECIES		ENSGT00940000161187	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802.a #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Narwhal	MODERN SPECIES	298	MMP23B (ENSMMNG00015011818)	MIB2 (ENSMMNG00015011865)	FNDC10 (ENSMMNG00015011985)	ENSMMNG00015011997 ##7	TMEM240 (ENSMMNG00015012013) #8	ATAD3A (ENSMMNG00015012031) #9	VWA1 (ENSMMNG00015012042) #12	TMEM88B (ENSMMNG00015012053) #13	ANKRD65 (ENSMMNG00015012064) #14	ENSMMNG00015012083 #15	CCNL2 (ENSMMNG00015012097) #16	AURKAIP1 (ENSMMNG00015012119) #17	MXRA8 (ENSMMNG00015012138) #18	DVL1 (ENSMMNG00015012169) #19	CPTP (ENSMMNG00015012187) #21	INTS11 (ENSMMNG00015012208) #22	PUSL1 (ENSMMNG00015012257) #23	ACAP3 (ENSMMNG00015012282) #24	ENSMMNG00015012308 #25	UBE2J2 (ENSMMNG00015012330) #26	C1QTNF12 (ENSMMNG00015012358) #27	B3GALT6 (ENSMMNG00015012379) #28	SDF4 (ENSMMNG00015012393) #29	TNFRSF4 (ENSMMNG00015012411) #30	TNFRSF18 (ENSMMNG00015012443) #31	ENSMMNG00015012469 #32	C1orf159 (ENSMMNG00015012484) #33	RNF223 (ENSMMNG00015012499) #34	ENSMMNG00015012509	AGRN (ENSMMNG00015012573) #35	ISG15 (ENSMMNG00015004810) #36
Beluga whale	MODERN SPECIES	51	MMP23B (ENSDLEG00000006869)	MIB2 (ENSDLEG00000006878)	FNDC10 (ENSDLEG00000006895)	SSU72 (ENSDLEG00000006897) #7	TMEM240 (ENSDLEG00000006901) #8	ATAD3A (ENSDLEG00000006903) #9	VWA1 (ENSDLEG00000006908) #12	TMEM88B (ENSDLEG00000006914) #13	ANKRD65 (ENSDLEG00000006918) #14	MRPL20 (ENSDLEG00000006921) #15	CCNL2 (ENSDLEG00000006924) #16	AURKAIP1 (ENSDLEG00000006932) #17	MXRA8 (ENSDLEG00000006942) #18	DVL1 (ENSDLEG00000006946) #19	CPTP (ENSDLEG00000006952) #21	INTS11 (ENSDLEG00000006957) #22	PUSL1 (ENSDLEG00000006965) #23	ACAP3 (ENSDLEG00000006978) #24	UBE2J2 (ENSDLEG00000006995) #26	C1QTNF12 (ENSDLEG00000006998) #27	B3GALT6 (ENSDLEG00000007013) #28	SDF4 (ENSDLEG00000007020) #29	ENSDLEG00000007033 #30	TNFRSF18 (ENSDLEG00000007039) #31	TTLL10 (ENSDLEG00000007057) #32	ENSDLEG00000007098 #33	RNF223 (ENSDLEG00000007103) #34	ENSDLEG00000007114	AGRN (ENSDLEG00000007170) #35	ISG15 (ENSDLEG00000007309) #36	HES4 (ENSDLEG00000007324) #37
Vaquita	MODERN SPECIES		ENSPSNG00000001592	ENSPSNG00000001534	MIB2 (ENSPSNG00000001447)	ENSPSNG00000001400 ##7	TMEM240 (ENSPSNG00000001386) #8	ATAD3A (ENSPSNG00000001261) #9	ENSPSNG00000001202 #12	TMEM88B (ENSPSNG00000001171) #13	ANKRD65 (ENSPSNG00000001154) #14	MRPL20 (ENSPSNG00000001135) #15	CCNL2 (ENSPSNG00000001090) #16	ENSPSNG00000001055 #17	MXRA8 (ENSPSNG00000001027) #18	DVL1 (ENSPSNG00000001003) #19	CPTP (ENSPSNG00000000977) #21	INTS11 (ENSPSNG00000000933) #22	PUSL1 (ENSPSNG00000000905) #23	ACAP3 (ENSPSNG00000000883) #24	UBE2J2 (ENSPSNG00000000779) #26	C1QTNF12 (ENSPSNG00000000750) #27	B3GALT6 (ENSPSNG00000000730) #28	SDF4 (ENSPSNG00000000711) #29	TNFRSF4 (ENSPSNG00000000686) #30	TNFRSF18 (ENSPSNG00000000645) #31	ENSPSNG00000000603 #32	RNF223 (ENSPSNG00000000548) #34	ENSPSNG00000000416	AGRN (ENSPSNG00000000134) #35	ISG15 (ENSPSNG00000000034) #36	HES4 (ENSPSNG00000000027) #37	ENSPSNG00000000022
Dolphin	MODERN SPECIES	1380				ENSTTRG00000017051 ##7	ENSTTRG00000017050	ATAD3A (ENSTTRG00000017049) #9	ENSTTRG00000017048 #12	TMEM88B (ENSTTRG00000017047) #13	MRPL20 (ENSTTRG00000017046) #15	CCNL2 (ENSTTRG00000021455) #16	AURKAIP1 (ENSTTRG00000017044) #17	MXRA8 (ENSTTRG00000017043) #18	DVL1 (ENSTTRG00000017040) #19	TAS1R3 (ENSTTRG00000017037) #20	CPTP (ENSTTRG00000017032) #21	INTS11 (ENSTTRG00000017031) #22	PUSL1 (ENSTTRG00000017030) #23	ACAP3 (ENSTTRG00000017027) #24	ENSTTRG00000017023 #25	UBE2J2 (ENSTTRG00000017021) #26	C1QTNF12 (ENSTTRG00000017019) #27	SDF4 (ENSTTRG00000017015) #29	ENSTTRG00000017012 #30	ENSTTRG00000017008 #32
Sperm whale	MODERN SPECIES	14	NADK (ENSPCTG00005002001)	SLC35E2B (ENSPCTG00005002023)	ENSPCTG00005002056	MMP23B (ENSPCTG00005002101)	MIB2 (ENSPCTG00005002150)	FNDC10 (ENSPCTG00005002303)	SSU72 (ENSPCTG00005002308) ##7	TMEM240 (ENSPCTG00005002318) #8	ATAD3A (ENSPCTG00005002332) #9	VWA1 (ENSPCTG00005002345)	CCNL2 (ENSPCTG00005002351) #16	AURKAIP1 (ENSPCTG00005002363) #17	MXRA8 (ENSPCTG00005002384) #18	DVL1 (ENSPCTG00005002415) #19	CPTP (ENSPCTG00005002431) #21	INTS11 (ENSPCTG00005002450) #22	PUSL1 (ENSPCTG00005002488) #23	ACAP3 (ENSPCTG00005002520) #24	UBE2J2 (ENSPCTG00005002641) #26	C1QTNF12 (ENSPCTG00005002659) #27	B3GALT6 (ENSPCTG00005002673) #28	SDF4 (ENSPCTG00005002686) #29	TNFRSF4 (ENSPCTG00005002724) #30	ENSPCTG00005002738 #31	TTLL10 (ENSPCTG00005002768) #32	C3H1orf159 (ENSPCTG00005002820) #33	RNF223 (ENSPCTG00005002835) #34	ENSPCTG00005002854	HES4 (ENSPCTG00005003695) #37	NOC2L (ENSPCTG00005003706)	SAMD11 (ENSPCTG00005003730)
Blue whale	MODERN SPECIES		MMP23B (ENSBMSG00010001769)	MIB2 (ENSBMSG00010001726)	FNDC10 (ENSBMSG00010001705)	ENSBMSG00010001693 ##7	TMEM240 (ENSBMSG00010001682) #8	ATAD3A (ENSBMSG00010001636) #9	VWA1 (ENSBMSG00010001609) #12	TMEM88B (ENSBMSG00010001596) #13	ENSBMSG00010001585	MRPL20 (ENSBMSG00010001571) #15	CCNL2 (ENSBMSG00010001537) #16	ENSBMSG00010001518 #17	MXRA8 (ENSBMSG00010001497) #18	DVL1 (ENSBMSG00010001476) #19	CPTP (ENSBMSG00010001426) #21	INTS11 (ENSBMSG00010001388) #22	PUSL1 (ENSBMSG00010001357) #23	ACAP3 (ENSBMSG00010001325) #24	UBE2J2 (ENSBMSG00010001271) #26	C1QTNF12 (ENSBMSG00010001249) #27	B3GALT6 (ENSBMSG00010001231) #28	SDF4 (ENSBMSG00010001210) #29	TNFRSF4 (ENSBMSG00010001184) #30	ENSBMSG00010001167 #31	TTLL10 (ENSBMSG00010001130) #32	ENSBMSG00010001100 #34	ENSBMSG00010000969	AGRN (ENSBMSG00010000577) #35	ISG15 (ENSBMSG00010000394) #36	HES4 (ENSBMSG00010000375) #37	ENSBMSG00010000356
Pecora	ANCESTRAL SPECIES	22	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	1143																ENSCHYG00000009267 #22
Yarkand deer	MODERN SPECIES	5	MMP23B (ENSCHYG00000027072)	MIB2 (ENSCHYG00000027075)	FNDC10 (ENSCHYG00000027079)	ENSCHYG00000013415 ##7	TMEM240 (ENSCHYG00000013454) #8	ATAD3A (ENSCHYG00000013508) #9	TMEM88B (ENSCHYG00000014342) #13	ANKRD65 (ENSCHYG00000014403) #14	MRPL20 (ENSCHYG00000014441) #15	CCNL2 (ENSCHYG00000014499) #16	AURKAIP1 (ENSCHYG00000015076) #17	MXRA8 (ENSCHYG00000015142) #18	DVL1 (ENSCHYG00000015401) #19	TAS1R3 (ENSCHYG00000015783) #20	CPTP (ENSCHYG00000015870) #21	INTS11 (ENSCHYG00000016180) #22	PUSL1 (ENSCHYG00000017699) #23	ACAP3 (ENSCHYG00000017879) #24	ENSCHYG00000018351 #25	UBE2J2 (ENSCHYG00000018419) #26	C1QTNF12 (ENSCHYG00000018640) #27	B3GALT6 (ENSCHYG00000018714) #28	ENSCHYG00000018744 #29	TNFRSF4 (ENSCHYG00000018926) #30	TNFRSF18 (ENSCHYG00000019033) #31	TTLL10 (ENSCHYG00000019150) #32	ENSCHYG00000019316 #33	RNF223 (ENSCHYG00000019481) #34	ENSCHYG00000019511	AGRN (ENSCHYG00000019668) #35	ENSCHYG00000020695 #36
Percora_a	ANCESTRAL SPECIES	15	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Siberian musk deer	MODERN SPECIES	389	MMP23B (ENSMMSG00000011576)	MIB2 (ENSMMSG00000011418)	FNDC10 (ENSMMSG00000011378)	ENSMMSG00000011362 ##7	TMEM240 (ENSMMSG00000011335) #8	ATAD3A (ENSMMSG00000011273) #9	VWA1 (ENSMMSG00000011245) #12	TMEM88B (ENSMMSG00000011216) #13	ANKRD65 (ENSMMSG00000011198) #14	ENSMMSG00000011176 #15	CCNL2 (ENSMMSG00000011105) #16	AURKAIP1 (ENSMMSG00000011079) #17	MXRA8 (ENSMMSG00000010966) #18	DVL1 (ENSMMSG00000010914) #19	ENSMMSG00000010841 #21	INTS11 (ENSMMSG00000010408) #22	PUSL1 (ENSMMSG00000010341) #23	ACAP3 (ENSMMSG00000010265) #24	ENSMMSG00000010235 #25	UBE2J2 (ENSMMSG00000010201) #26	C1QTNF12 (ENSMMSG00000010117) #27	B3GALT6 (ENSMMSG00000010097) #28	SDF4 (ENSMMSG00000010069) #29	TNFRSF4 (ENSMMSG00000010029) #30	TNFRSF18 (ENSMMSG00000009995) #31	ENSMMSG00000009934 #32	C1orf159 (ENSMMSG00000009850) #33	RNF223 (ENSMMSG00000009841) #34	ENSMMSG00000009475	AGRN (ENSMMSG00000008641) #35	ISG15 (ENSMMSG00000008567) #36
Bovidae	ANCESTRAL SPECIES	15	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Caprinae	ANCESTRAL SPECIES	12	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Goat	MODERN SPECIES	7	FNDC10 (ENSCHIG00000010167)	ENSCHIG00000026529 ##7	TMEM240 (ENSCHIG00000013885) #8	ATAD3A (ENSCHIG00000019987) #9	VWA1 (ENSCHIG00000006814) #12	TMEM88B (ENSCHIG00000014820) #13	ANKRD65 (ENSCHIG00000020091) #14	MRPL20 (ENSCHIG00000010545) #15	CCNL2 (ENSCHIG00000019097) #16	ENSCHIG00000001910	AURKAIP1 (ENSCHIG00000015753) #17	MXRA8 (ENSCHIG00000023192) #18	DVL1 (ENSCHIG00000015037) #19	TAS1R3 (ENSCHIG00000024699) #20	CPTP (ENSCHIG00000013079) #21	INTS11 (ENSCHIG00000023117) #22	PUSL1 (ENSCHIG00000012615) #23	ACAP3 (ENSCHIG00000017945) #24	ENSCHIG00000024863 #25	UBE2J2 (ENSCHIG00000014155) #26	C1QTNF12 (ENSCHIG00000020534) #27	B3GALT6 (ENSCHIG00000010475) #28	SDF4 (ENSCHIG00000013709) #29	TNFRSF4 (ENSCHIG00000019827) #30	TNFRSF18 (ENSCHIG00000002653) #31	TTLL10 (ENSCHIG00000014583) #32	C1orf159 (ENSCHIG00000020221) #33	RNF223 (ENSCHIG00000011163) #34	ENSCHIG00000019171	AGRN (ENSCHIG00000006763) #35	ISG15 (ENSCHIG00000017128) #36
Rambouillet Sheep	MODERN SPECIES	3	ENSOARG00020008887	MMP23B (ENSOARG00020009259)	ENSOARG00020009348 ##7	TMEM240 (ENSOARG00020009392) #8	ATAD3A (ENSOARG00020009433) #9	ENSOARG00020009474	TMEM88B (ENSOARG00020009498) #13	ANKRD65 (ENSOARG00020009531) #14	MRPL20 (ENSOARG00020009575) #15	CCNL2 (ENSOARG00020009634) #16	AURKAIP1 (ENSOARG00020009714) #17	ENSOARG00020009736	MXRA8 (ENSOARG00020009763) #18	DVL1 (ENSOARG00020009834) #19	CPTP (ENSOARG00020010144) #21	INTS11 (ENSOARG00020010229) #22	PUSL1 (ENSOARG00020010873) #23	ACAP3 (ENSOARG00020011012) #24	ENSOARG00020011191 #25	UBE2J2 (ENSOARG00020011346) #26	C1QTNF12 (ENSOARG00020011434) #27	B3GALT6 (ENSOARG00020011484) #28	SDF4 (ENSOARG00020011510) #29	TNFRSF4 (ENSOARG00020011581) #30	TNFRSF18 (ENSOARG00020011621) #31	TTLL10 (ENSOARG00020011661) #32	C1orf159 (ENSOARG00020012032) #33	RNF223 (ENSOARG00020012076) #34	ENSOARG00020012108	AGRN (ENSOARG00020012422) #35	ISG15 (ENSOARG00020014334) #36
Bovinae	ANCESTRAL SPECIES	12	ENSGT00960000190348	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Bos	ANCESTRAL SPECIES	12	ENSGT00960000190348	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Bos_b	ANCESTRAL SPECIES	27	ENSGT00960000190348	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00950000185444	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35
Cow	MODERN SPECIES	7	ENSBTAG00000050720	FNDC10 (ENSBTAG00000047755)	SSU72 (ENSBTAG00000002575) ##7	TMEM240 (ENSBTAG00000046073) #8	ATAD3A (ENSBTAG00000002219) #9	VWA1 (ENSBTAG00000021294) #12	TMEM88B (ENSBTAG00000023784) #13	ANKRD65 (ENSBTAG00000039055) #14	MRPL20 (ENSBTAG00000004872) #15	CCNL2 (ENSBTAG00000004873) #16	AURKAIP1 (ENSBTAG00000004874) #17	MXRA8 (ENSBTAG00000012247) #18	DVL1 (ENSBTAG00000010696) #19	TAS1R3 (ENSBTAG00000051410) #20	CPTP (ENSBTAG00000007623) #21	INTS11 (ENSBTAG00000007620) #22	PUSL1 (ENSBTAG00000007619) #23	ACAP3 (ENSBTAG00000009856) #24	SCNN1D (ENSBTAG00000017674) #25	UBE2J2 (ENSBTAG00000015882) #26	C1QTNF12 (ENSBTAG00000031631) #27	B3GALT6 (ENSBTAG00000037523) #28	SDF4 (ENSBTAG00000015642) #29	TNFRSF4 (ENSBTAG00000015635) #30	TNFRSF18 (ENSBTAG00000015632) #31	TTLL10 (ENSBTAG00000018028) #32	C16H1orf159 (ENSBTAG00000014511)	ENSBTAG00000024492	RNF223 (ENSBTAG00000046758) #34	AGRN (ENSBTAG00000013191) #35	ISG15 (ENSBTAG00000014707) #36
Hybrid Bos Indicus	MODERN SPECIES	7	MIB2 (ENSBIXG00005014324)	FNDC10 (ENSBIXG00005014134)	ENSBIXG00005014127 ##7	TMEM240 (ENSBIXG00005014106) #8	ATAD3A (ENSBIXG00005014083) #9	VWA1 (ENSBIXG00005014055) #12	TMEM88B (ENSBIXG00005014039) #13	ANKRD65 (ENSBIXG00005001765) #14	MRPL20 (ENSBIXG00005014019) #15	CCNL2 (ENSBIXG00005013985) #16	AURKAIP1 (ENSBIXG00005001741) #17	MXRA8 (ENSBIXG00005013867) #18	DVL1 (ENSBIXG00005013637) #19	TAS1R3 (ENSBIXG00005013562) #20	CPTP (ENSBIXG00005006608) #21	INTS11 (ENSBIXG00005001620) #22	PUSL1 (ENSBIXG00005013278) #23	ACAP3 (ENSBIXG00005001528) #24	ENSBIXG00005013245 #25	UBE2J2 (ENSBIXG00005013216) #26	C1QTNF12 (ENSBIXG00005013162) #27	B3GALT6 (ENSBIXG00005013144) #28	SDF4 (ENSBIXG00005013131) #29	TTLL10 (ENSBIXG00005006798) #32	ENSBIXG00005013041 #30	TNFRSF18 (ENSBIXG00005013007) #31	ENSBIXG00005001463 #33	RNF223 (ENSBIXG00005012874) #34	ENSBIXG00005012849	AGRN (ENSBIXG00005012713) #35	ISG15 (ENSBIXG00005001332) #36
Bos_a	ANCESTRAL SPECIES	8	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Domestic yak	MODERN SPECIES	5	FNDC10 (ENSBGRG00000010622)	ENSBGRG00000010655 #7	TMEM240 (ENSBGRG00000010779) #8	ATAD3A (ENSBGRG00000010900) #9	VWA1 (ENSBGRG00000011551) #12	TMEM88B (ENSBGRG00000011612) #13	ANKRD65 (ENSBGRG00000011709) #14	MRPL20 (ENSBGRG00000011760) #15	CCNL2 (ENSBGRG00000011847) #16	AURKAIP1 (ENSBGRG00000012096) #17	MXRA8 (ENSBGRG00000012149) #18	DVL1 (ENSBGRG00000012559) #19	TAS1R3 (ENSBGRG00000012972) #20	ENSBGRG00000013080 #21	ENSBGRG00000013203 #21	INTS11 (ENSBGRG00000013239) #22	PUSL1 (ENSBGRG00000013731) #23	ACAP3 (ENSBGRG00000013842) #24	ENSBGRG00000013988 #25	UBE2J2 (ENSBGRG00000014168) #26	C1QTNF12 (ENSBGRG00000014333) #27	B3GALT6 (ENSBGRG00000014434) #28	SDF4 (ENSBGRG00000014450) #29	TNFRSF4 (ENSBGRG00000014523) #30	TNFRSF18 (ENSBGRG00000014590) #31	TTLL10 (ENSBGRG00000014682) #32	C1orf159 (ENSBGRG00000014904) #33	RNF223 (ENSBGRG00000015088) #34	AGRN (ENSBGRG00000015397) #35	ISG15 (ENSBGRG00000016212) #36	HES4 (ENSBGRG00000016269) #37
Wild yak	MODERN SPECIES	185	MMP23B (ENSBMUG00000023835)	MIB2 (ENSBMUG00000023905)	ENSBMUG00000023927	ENSBMUG00000023944 ##7	TMEM240 (ENSBMUG00000023963) #8	ATAD3A (ENSBMUG00000023976) #9	VWA1 (ENSBMUG00000023986) #12	TMEM88B (ENSBMUG00000023994) #13	ANKRD65 (ENSBMUG00000024005) #14	MRPL20 (ENSBMUG00000024038) #15	CCNL2 (ENSBMUG00000024071) #16	AURKAIP1 (ENSBMUG00000024090) #17	DVL1 (ENSBMUG00000024210) #19	TAS1R3 (ENSBMUG00000024248) #20	CPTP (ENSBMUG00000024256) #21	INTS11 (ENSBMUG00000024347) #22	PUSL1 (ENSBMUG00000024367) #23	ACAP3 (ENSBMUG00000024382) #24	ENSBMUG00000024486 #25	UBE2J2 (ENSBMUG00000024545) #26	C1QTNF12 (ENSBMUG00000024557) #27	SDF4 (ENSBMUG00000024571) #29	ENSBMUG00000024580 #30	ENSBMUG00000024590 #31	ENSBMUG00000024612 #32	ENSBMUG00000024639 #33	ENSBMUG00000024714	RNF223 (ENSBMUG00000024724) #34	AGRN (ENSBMUG00000025260) #35	ISG15 (ENSBMUG00000025431) #36	ENSBMUG00000025435
American bison	MODERN SPECIES	3204	FNDC10 (ENSBBBG00000016944)	ENSBBBG00000016939 ##7	TMEM240 (ENSBBBG00000016932) #8	ATAD3A (ENSBBBG00000016910) #9	VWA1 (ENSBBBG00000016870) #12	TMEM88B (ENSBBBG00000007663) #13	ENSBBBG00000006770	ENSBBBG00000016816	ENSBBBG00000004158 #15	CCNL2 (ENSBBBG00000016799) #16	AURKAIP1 (ENSBBBG00000016759) #17	MXRA8 (ENSBBBG00000004139) #18	DVL1 (ENSBBBG00000016708) #19	TAS1R3 (ENSBBBG00000016639) #20	CPTP (ENSBBBG00000008652) #21	INTS11 (ENSBBBG00000016616) #22	ACAP3 (ENSBBBG00000016419) #24	ENSBBBG00000016372 #25	UBE2J2 (ENSBBBG00000016356) #26	SDF4 (ENSBBBG00000016312) #29	TNFRSF4 (ENSBBBG00000016295) #30	ENSBBBG00000016275 #31	TTLL10 (ENSBBBG00000004038) #32	C1orf159 (ENSBBBG00000016214) #33	ENSBBBG00000004015	RNF223 (ENSBBBG00000015977) #34	ENSBBBG00000015974 #35	ISG15 (ENSBBBG00000003972) #36	HES4 (ENSBBBG00000015944) #37	ENSBBBG00000002585	PLEKHN1 (ENSBBBG00000015929)
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00390000010165.i.a ##7	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000167742 #10	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Carnivora	ANCESTRAL SPECIES	1	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000167742 #10	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00910000147197	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Caniformia	ANCESTRAL SPECIES	2	ENSGT00960000189725	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00910000147197	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Canidae	ANCESTRAL SPECIES	11	ENSGT00940000161187	ENSGT00940000158097	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00940000161187	ENSGT00940000158097	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Dog	MODERN SPECIES	33	MMP23B (ENSCAFG00845015492)	MIB2 (ENSCAFG00845015419)	SSU72 (ENSCAFG00845015309) #7	ENSCAFG00845025522 #8	ATAD3A (ENSCAFG00845025314) #9	VWA1 (ENSCAFG00845025241) #12	TMEM88B (ENSCAFG00845025202) #13	ANKRD65 (ENSCAFG00845025171) #14	MRPL20 (ENSCAFG00845025112) #15	CCNL2 (ENSCAFG00845024993) #16	AURKAIP1 (ENSCAFG00845024931) #17	MXRA8 (ENSCAFG00845024705) #18	DVL1 (ENSCAFG00845024543) #19	TAS1R3 (ENSCAFG00845024442) #20	CPTP (ENSCAFG00845024419) #21	INTS11 (ENSCAFG00845024002) #22	PUSL1 (ENSCAFG00845023803) #23	ACAP3 (ENSCAFG00845023527) #24	ENSCAFG00845023300 #25	UBE2J2 (ENSCAFG00845023228) #26	ENSCAFG00845023081 #27	B3GALT6 (ENSCAFG00845023048) #28	SDF4 (ENSCAFG00845023000) #29	ENSCAFG00845022948 #30	TNFRSF18 (ENSCAFG00845022900) #31	TTLL10 (ENSCAFG00845022670) #32	RNF223 (ENSCAFG00845022620) #34	ENSCAFG00845022501 #33	ENSCAFG00845022308	AGRN (ENSCAFG00845020649) #35	ISG15 (ENSCAFG00845020316) #36
Dingo	MODERN SPECIES	373	ENSCAFG00020011472	FNDC10 (ENSCAFG00020011474)	ENSCAFG00020011476 ##7	TMEM240 (ENSCAFG00020011478) #8	ATAD3A (ENSCAFG00020011482) #9	VWA1 (ENSCAFG00020011489) #12	TMEM88B (ENSCAFG00020011493) #13	ANKRD65 (ENSCAFG00020011498) #14	ENSCAFG00020011502 #15	CCNL2 (ENSCAFG00020011506) #16	AURKAIP1 (ENSCAFG00020011519) #17	MXRA8 (ENSCAFG00020011521) #18	DVL1 (ENSCAFG00020011542) #19	TAS1R3 (ENSCAFG00020011552) #20	CPTP (ENSCAFG00020011561) #21	INTS11 (ENSCAFG00020011566) #22	PUSL1 (ENSCAFG00020011568) #23	ACAP3 (ENSCAFG00020011571) #24	ENSCAFG00020011584 #25	UBE2J2 (ENSCAFG00020011591) #26	ENSCAFG00020011592 #27	B3GALT6 (ENSCAFG00020011595) #28	SDF4 (ENSCAFG00020011599) #29	TNFRSF4 (ENSCAFG00020011606) #30	TNFRSF18 (ENSCAFG00020011616) #31	TTLL10 (ENSCAFG00020011620) #32	ENSCAFG00020011638	RNF223 (ENSCAFG00020011641) #34	ENSCAFG00020011642	AGRN (ENSCAFG00020011666) #35	ISG15 (ENSCAFG00020011675) #36
Red fox	MODERN SPECIES	62	MMP23B (ENSVVUG00000004566)	MIB2 (ENSVVUG00000004544)	ENSVVUG00000004532 #7	TMEM240 (ENSVVUG00000004525) #8	ATAD3A (ENSVVUG00000004512) #9	VWA1 (ENSVVUG00000004484) #12	TMEM88B (ENSVVUG00000004480) #13	ENSVVUG00000004476 #14	MRPL20 (ENSVVUG00000004455) #15	CCNL2 (ENSVVUG00000004443) #16	AURKAIP1 (ENSVVUG00000004437) #17	MXRA8 (ENSVVUG00000004397) #18	DVL1 (ENSVVUG00000004376) #19	TAS1R3 (ENSVVUG00000004360) #20	CPTP (ENSVVUG00000004358) #21	INTS11 (ENSVVUG00000004350) #22	PUSL1 (ENSVVUG00000004320) #23	ACAP3 (ENSVVUG00000004260) #24	ENSVVUG00000004194 #25	UBE2J2 (ENSVVUG00000004179) #26	C1QTNF12 (ENSVVUG00000004145) #27	SDF4 (ENSVVUG00000004125) #29	TNFRSF4 (ENSVVUG00000004111) #30	TNFRSF18 (ENSVVUG00000004103) #31	ENSVVUG00000004058 #32	ENSVVUG00000004030	RNF223 (ENSVVUG00000004022) #34	ENSVVUG00000003994	AGRN (ENSVVUG00000003802) #35	ISG15 (ENSVVUG00000003769) #36	HES4 (ENSVVUG00000003763) #37
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00960000189725	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00910000147197	ENSGT00390000015823.gb.b #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Ursidae	ANCESTRAL SPECIES		ENSGT00940000158459	ENSGT00940000161187	ENSGT00940000158097	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00390000015823.fb #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Ursus	ANCESTRAL SPECIES	137	ENSGT00940000159351	ENSGT00940000158459	ENSGT00940000161187	ENSGT00940000158097	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00390000015823.gb.b #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
American black bear	MODERN SPECIES	3626								ENSUAMG00000012829 #15	ENSUAMG00000012827 #16	ENSUAMG00000012826 #16	AURKAIP1 (ENSUAMG00000012825) #17	MXRA8 (ENSUAMG00000012818) #18	DVL1 (ENSUAMG00000012817) #19	TAS1R3 (ENSUAMG00000012810) #20	CPTP (ENSUAMG00000012807) #21	INTS11 (ENSUAMG00000012804) #22	PUSL1 (ENSUAMG00000012801) #23	ACAP3 (ENSUAMG00000010368) #24	ENSUAMG00000010283 #25
Polar bear	MODERN SPECIES	462		CFAP74 (ENSUMAG00000001512)	ENSUMAG00000001593	CALML6 (ENSUMAG00000001602)	GNB1 (ENSUMAG00000001615)	NADK (ENSUMAG00000001645)	SLC35E2B (ENSUMAG00000001658)	ENSUMAG00000001681	SSU72 (ENSUMAG00000001724) #7	ATAD3A (ENSUMAG00000001753) #9	ENSUMAG00000001917 #15	CCNL2 (ENSUMAG00000001941) #16	AURKAIP1 (ENSUMAG00000002016) #17	ENSUMAG00000002028 #19	CPTP (ENSUMAG00000002064) #21	INTS11 (ENSUMAG00000002070) #22	PUSL1 (ENSUMAG00000002084) #23	ACAP3 (ENSUMAG00000002130) #24	ENSUMAG00000002403 #25	UBE2J2 (ENSUMAG00000002423) #26	SDF4 (ENSUMAG00000002432) #29	ENSUMAG00000002438 #30	ENSUMAG00000002443 #31	ENSUMAG00000002472 #33	ENSUMAG00000002477	AGRN (ENSUMAG00000002536) #35	ISG15 (ENSUMAG00000002679) #36	ENSUMAG00000002682	PLEKHN1 (ENSUMAG00000002688)	KLHL17 (ENSUMAG00000002693)	NOC2L (ENSUMAG00000002714)
Giant Panda	MODERN SPECIES	2	SLC35E2B (ENSAMEG00000013646)	ENSAMEG00000013654	MMP23B (ENSAMEG00000013686)	MIB2 (ENSAMEG00000013698)	SSU72 (ENSAMEG00000013736) #7	ENSAMEG00000026735 #8	ATAD3A (ENSAMEG00000013750) #9	TMEM88B (ENSAMEG00000028743) #13	MRPL20 (ENSAMEG00000028143) #15	CCNL2 (ENSAMEG00000013889) #16	AURKAIP1 (ENSAMEG00000013884) #17	MXRA8 (ENSAMEG00000013866) #18	DVL1 (ENSAMEG00000013804) #19	TAS1R3 (ENSAMEG00000013797) #20	CPTP (ENSAMEG00000013792) #21	INTS11 (ENSAMEG00000013755) #22	PUSL1 (ENSAMEG00000013752) #23	ACAP3 (ENSAMEG00000013701) #24	ENSAMEG00000013661 #25	UBE2J2 (ENSAMEG00000013651) #26	C1QTNF12 (ENSAMEG00000013642) #27	B3GALT6 (ENSAMEG00000019164) #28	SDF4 (ENSAMEG00000013626) #29	TNFRSF4 (ENSAMEG00000013613) #30	TNFRSF18 (ENSAMEG00000013600) #31	C1orf159 (ENSAMEG00000016561) #33	ENSAMEG00000027478 #34	ENSAMEG00000016617	AGRN (ENSAMEG00000016573) #35	ISG15 (ENSAMEG00000018541) #36	ENSAMEG00000016570 #37
Mustelinae	ANCESTRAL SPECIES		ENSGT00390000010165.i.a ##7	ENSGT00960000189725	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00910000147197	ENSGT00390000015823.gb.b #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
American mink	MODERN SPECIES	164	NADK (ENSNVIG00000004465)	SLC35E2B (ENSNVIG00000004504)	ENSNVIG00000004544	MIB2 (ENSNVIG00000004618)	ENSNVIG00000005411 ##7	TMEM240 (ENSNVIG00000005421) #8	ATAD3A (ENSNVIG00000005452) #9	ENSNVIG00000005490 #14	ENSNVIG00000005497	MRPL20 (ENSNVIG00000005501) #15	CCNL2 (ENSNVIG00000005514) #16	AURKAIP1 (ENSNVIG00000005547) #17	DVL1 (ENSNVIG00000005615) #19	TAS1R3 (ENSNVIG00000006534) #20	CPTP (ENSNVIG00000006559) #21	INT11 (ENSNVIG00000006596) #22	ENSNVIG00000006831	ACAP3 (ENSNVIG00000006863) #24	UBE2J2 (ENSNVIG00000007101) #26	C1QTNF12 (ENSNVIG00000007167) #27	B3GALT6 (ENSNVIG00000007185) #28	SDF4 (ENSNVIG00000007205) #29	TNFRSF4 (ENSNVIG00000007222) #30	ENSNVIG00000007240 #31	ENSNVIG00000007257 #32	C1orf159 (ENSNVIG00000007269) #33	RNF223 (ENSNVIG00000007311) #34	ENSNVIG00000007320	AGRN (ENSNVIG00000007363) #35	ZNF527 (ENSNVIG00000007842)	ZNF875 (ENSNVIG00000007859)
Ferret	MODERN SPECIES	547	ENSMPUG00000014501	MMP23B (ENSMPUG00000014481)	MIB2 (ENSMPUG00000014407)	ENSMPUG00000014404	SSU72 (ENSMPUG00000014394) #7	TMEM240 (ENSMPUG00000014392) #8	ATAD3A (ENSMPUG00000014385) #9	VWA1 (ENSMPUG00000014375) #12	TMEM88B (ENSMPUG00000014370) #13	ANKRD65 (ENSMPUG00000014363) #14	CCNL2 (ENSMPUG00000014361) #16	AURKAIP1 (ENSMPUG00000014359) #17	DVL1 (ENSMPUG00000014355) #19	TAS1R3 (ENSMPUG00000014328) #20	CPTP (ENSMPUG00000014322) #21	INTS11 (ENSMPUG00000014311) #22	PUSL1 (ENSMPUG00000014313) #23	ACAP3 (ENSMPUG00000014222) #24	ENSMPUG00000014145 #25	UBE2J2 (ENSMPUG00000014139) #26	C1QTNF12 (ENSMPUG00000014133) #27	SDF4 (ENSMPUG00000014097) #29	TNFRSF4 (ENSMPUG00000014064) #30	TNFRSF18 (ENSMPUG00000014056) #31	TTLL10 (ENSMPUG00000014027) #32	ENSMPUG00000013993 #33	RNF223 (ENSMPUG00000020070) #34	ENSMPUG00000013936	AGRN (ENSMPUG00000013927) #35	ISG15 (ENSMPUG00000013925) #36	HES4 (ENSMPUG00000013915) #37
Felidae	ANCESTRAL SPECIES	18	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000167742 #10	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00910000147197	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Panthera	ANCESTRAL SPECIES	4	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000167742 #10	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00910000147197	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Panthera_a	ANCESTRAL SPECIES	14	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000167742 #10	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00910000147197	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000162007 #36	ENSGT00940000163056 #37
leopard	MODERN SPECIES	37	FNDC10 (ENSPPRG00000020512)	ENSPPRG00000005936 ##7	TMEM240 (ENSPPRG00000006196) #8	ATAD3A (ENSPPRG00000007506) #9	ENSPPRG00000008032 #10	VWA1 (ENSPPRG00000008755) #12	TMEM88B (ENSPPRG00000008933) #13	ENSPPRG00000009118	MRPL20 (ENSPPRG00000009188) #15	CCNL2 (ENSPPRG00000009798) #16	AURKAIP1 (ENSPPRG00000010422) #17	MXRA8 (ENSPPRG00000010717) #18	DVL1 (ENSPPRG00000013114) #19	TAS1R3 (ENSPPRG00000013521) #20	CPTP (ENSPPRG00000013811) #21	INTS11 (ENSPPRG00000021402) #22	PUSL1 (ENSPPRG00000023329) #23	ACAP3 (ENSPPRG00000000642) #24	ENSPPRG00000002392 #25	UBE2J2 (ENSPPRG00000002864) #26	C1QTNF12 (ENSPPRG00000003046) #27	B3GALT6 (ENSPPRG00000020960) #28	SDF4 (ENSPPRG00000003814) #29	TNFRSF4 (ENSPPRG00000004615) #30	TNFRSF18 (ENSPPRG00000005432) #31	TTLL10 (ENSPPRG00000007404) #32	C1orf159 (ENSPPRG00000009860) #33	RNF223 (ENSPPRG00000021302) #34	ENSPPRG00000010548	ISG15 (ENSPPRG00000021561) #36	HES4 (ENSPPRG00000015344) #37
lion	MODERN SPECIES	8	FNDC10 (ENSPLOG00000014264)	ENSPLOG00000014286 ##7	TMEM240 (ENSPLOG00000014336) #8	ATAD3A (ENSPLOG00000014418) #9	ENSPLOG00000014610	TMEM88B (ENSPLOG00000014650) #13	ENSPLOG00000014701 #14	ENSPLOG00000014745	MRPL20 (ENSPLOG00000014776) #15	CCNL2 (ENSPLOG00000014848) #16	AURKAIP1 (ENSPLOG00000015063) #17	MXRA8 (ENSPLOG00000015217) #18	DVL1 (ENSPLOG00000015428) #19	TAS1R3 (ENSPLOG00000015523) #20	CPTP (ENSPLOG00000015785) #21	INTS11 (ENSPLOG00000015885) #22	PUSL1 (ENSPLOG00000016245) #23	ACAP3 (ENSPLOG00000016435) #24	UBE2J2 (ENSPLOG00000017071) #26	ENSPLOG00000017205 #27	B3GALT6 (ENSPLOG00000017227) #28	SDF4 (ENSPLOG00000017278) #29	TNFRSF4 (ENSPLOG00000017345) #30	TNFRSF18 (ENSPLOG00000017432) #31	ENSPLOG00000017465 #32	ENSPLOG00000017560 #33	RNF223 (ENSPLOG00000017601) #34	ENSPLOG00000017633	ISG15 (ENSPLOG00000018362) #36	HES4 (ENSPLOG00000018382) #37	ENSPLOG00000018432
Tiger	MODERN SPECIES	476	GNB1 (ENSPTIG00000006176)	NADK (ENSPTIG00000016967)	SLC35E2B (ENSPTIG00000014540)	ENSPTIG00000013915	ENSPTIG00000007984	ENSPTIG00000006303	SSU72 (ENSPTIG00000004042) #7	ATAD3A (ENSPTIG00000021911) #9	MRPL20 (ENSPTIG00000020769) #15	ENSPTIG00000020568 #16	ENSPTIG00000020409 #16	AURKAIP1 (ENSPTIG00000019314) #17	ENSPTIG00000018704 #19	TAS1R3 (ENSPTIG00000017830) #20	CPTP (ENSPTIG00000017556) #21	INTS11 (ENSPTIG00000019834) #22	PUSL1 (ENSPTIG00000018532) #23	ACAP3 (ENSPTIG00000015854) #24	ENSPTIG00000014372 #25	UBE2J2 (ENSPTIG00000013640) #26	C1QTNF12 (ENSPTIG00000013122) #27	SDF4 (ENSPTIG00000012250) #29	TNFRSF18 (ENSPTIG00000010016) #31	ENSPTIG00000008943 #32	C1orf159 (ENSPTIG00000007363) #33	ISG15 (ENSPTIG00000016876) #36	ENSPTIG00000015203	PLEKHN1 (ENSPTIG00000009699)	ENSPTIG00000008334	ENSPTIG00000008048	NOC2L (ENSPTIG00000004690)
Cat	MODERN SPECIES	239	FNDC10 (ENSFCAG00000046134)	ENSFCAG00000036121 ##7	TMEM240 (ENSFCAG00000024738) #8	ATAD3A (ENSFCAG00000009053) #9	VWA1 (ENSFCAG00000029024) #12	TMEM88B (ENSFCAG00000028698) #13	ANKRD65 (ENSFCAG00000044621) #14	MRPL20 (ENSFCAG00000033203) #15	CCNL2 (ENSFCAG00000036684) #16	AURKAIP1 (ENSFCAG00000024578) #17	ENSFCAG00000053534	MXRA8 (ENSFCAG00000043363) #18	DVL1 (ENSFCAG00000007627) #19	TAS1R3 (ENSFCAG00000007625) #20	CPTP (ENSFCAG00000045076) #21	INTS11 (ENSFCAG00000007618) #22	PUSL1 (ENSFCAG00000007617) #23	ACAP3 (ENSFCAG00000007614) #24	SCNN1D (ENSFCAG00000007609) #25	UBE2J2 (ENSFCAG00000043550) #26	C1QTNF12 (ENSFCAG00000003367) #27	B3GALT6 (ENSFCAG00000045789) #28	SDF4 (ENSFCAG00000007607) #29	TNFRSF4 (ENSFCAG00000003366) #30	TNFRSF18 (ENSFCAG00000009314) #31	TTLL10 (ENSFCAG00000003365) #32	ENSFCAG00000035675 #33	RNF223 (ENSFCAG00000043375) #34	ENSFCAG00000023900	AGRN (ENSFCAG00000003363) #35	ISG15 (ENSFCAG00000032098) #36
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Equus	ANCESTRAL SPECIES	2	ENSGT00940000158097	ENSGT00550000076432	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00940000163056 #37
Horse	MODERN SPECIES	11	ENSECAG00000002115	ENSECAG00000014774	MIB2 (ENSECAG00000014796)	FNDC10 (ENSECAG00000029352)	SSU72 (ENSECAG00000030504) #7	ATAD3A (ENSECAG00000028977) #9	VWA1 (ENSECAG00000033093) #12	TMEM88B (ENSECAG00000040229) #13	ANKRD65 (ENSECAG00000028668) #14	CCNL2 (ENSECAG00000018423) #16	ENSECAG00000052561 #17	MXRA8 (ENSECAG00000020731) #18	DVL1 (ENSECAG00000020745) #19	TAS1R3 (ENSECAG00000022351) #20	CPTP (ENSECAG00000023234) #21	INTS11 (ENSECAG00000023292) #22	PUSL1 (ENSECAG00000006248) #23	ACAP3 (ENSECAG00000007315) #24	SCNN1D (ENSECAG00000010898) #25	UBE2J2 (ENSECAG00000015293) #26	SDF4 (ENSECAG00000017831) #29	C1QTNF12 (ENSECAG00000016576) #27	TNFRSF4 (ENSECAG00000019948) #30	TTLL10 (ENSECAG00000021628) #32	TNFRSF18 (ENSECAG00000020810) #31	C2H1orf159 (ENSECAG00000021734) #33	ENSECAG00000022844	RNF223 (ENSECAG00000022747) #34	AGRN (ENSECAG00000030432) #35	ISG15 (ENSECAG00000059003) #36	HES4 (ENSECAG00000028788) #37
Donkey	MODERN SPECIES	25	FNDC10 (ENSEASG00005014495)	SSU72 (ENSEASG00005014497) #7	ENSEASG00005028792 #8	ATAD3A (ENSEASG00005014502) #9	VWA1 (ENSEASG00005014508) #12	TMEM88B (ENSEASG00005029934) #13	ENSEASG00005027782 #14	MRPL20 (ENSEASG00005035428) #15	CCNL2 (ENSEASG00005014517) #16	AURKAIP1 (ENSEASG00005014521) #17	MXRA8 (ENSEASG00005014522) #18	ENSEASG00005030476 #19	ENSEASG00005014550 #19	TAS1R3 (ENSEASG00005014984) #20	CPTP (ENSEASG00005033745) #21	INTS11 (ENSEASG00005014989) #22	PUSL1 (ENSEASG00005015001) #23	ACAP3 (ENSEASG00005015005) #24	SCNN1D (ENSEASG00005015009) #25	UBE2J2 (ENSEASG00005035838) #26	ENSEASG00005015014 #27	SDF4 (ENSEASG00005015019) #29	ENSEASG00005015021 #30	TNFRSF18 (ENSEASG00005030367) #31	ENSEASG00005015029 #32	C1orf159 (ENSEASG00005030232) #33	RNF223 (ENSEASG00005025252) #34	ENSEASG00005015049	AGRN (ENSEASG00005015068) #35	ISG15 (ENSEASG00005015095) #36	HES4 (ENSEASG00005025937) #37
Chiroptera	ANCESTRAL SPECIES		ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Megabat	MODERN SPECIES	1737												MXRA8 (ENSPVAG00000001025) #18	DVL1 (ENSPVAG00000001022) #19	TAS1R3 (ENSPVAG00000001020) #20	CPTP (ENSPVAG00000001018) #21	INTS11 (ENSPVAG00000001017) #22	PUSL1 (ENSPVAG00000001016) #23	ACAP3 (ENSPVAG00000001015) #24	ENSPVAG00000001014 #25	UBE2J2 (ENSPVAG00000001013) #26	C1QTNF12 (ENSPVAG00000001012) #27	SDF4 (ENSPVAG00000001010) #29	TNFRSF4 (ENSPVAG00000001009) #30	ENSPVAG00000001008 #31	ENSPVAG00000001007 #32
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00390000010165.i.b.a.b #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Greater horseshoe bat	MODERN SPECIES	27	MIB2 (ENSRFEG00010013521)	FNDC10 (ENSRFEG00010013488)	ENSRFEG00010013401 ##7	TMEM240 (ENSRFEG00010013336) #8	ATAD3A (ENSRFEG00010012817) #9	VWA1 (ENSRFEG00010012768) #12	TMEM88B (ENSRFEG00010012719) #13	ANKRD65 (ENSRFEG00010012646) #14	ENSRFEG00010012582 #15	CCNL2 (ENSRFEG00010012348) #16	AURKAIP1 (ENSRFEG00010012290) #17	MXRA8 (ENSRFEG00010012002) #18	DVL1 (ENSRFEG00010011571) #19	TAS1R3 (ENSRFEG00010011297) #20	CPTP (ENSRFEG00010011249) #21	INTS11 (ENSRFEG00010010794) #22	PUSL1 (ENSRFEG00010010714) #23	ACAP3 (ENSRFEG00010010624) #24	ENSRFEG00010010322 #25	UBE2J2 (ENSRFEG00010010208) #26	C1QTNF12 (ENSRFEG00010010187) #27	B3GALT6 (ENSRFEG00010010168) #28	SDF4 (ENSRFEG00010010110) #29	ENSRFEG00010009994 #30	TNFRSF18 (ENSRFEG00010009967) #31	TTLL10 (ENSRFEG00010009852) #32	ENSRFEG00010009772 #33	RNF223 (ENSRFEG00010009715) #34	ENSRFEG00010009694	AGRN (ENSRFEG00010009616) #35	ISG15 (ENSRFEG00010009564) #36
Atlantogenata	ANCESTRAL SPECIES	4	ENSGT00940000158097	ENSGT00940000167258	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652
Afrotheria	ANCESTRAL SPECIES	14	ENSGT00940000161187	ENSGT00940000158097	ENSGT00940000167258	ENSGT00390000010165.i.a ##7	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652
Afrotheria_a	ANCESTRAL SPECIES	14	ENSGT00940000161187	ENSGT00940000158097	ENSGT00940000167258	ENSGT00390000010165.i.a ##7	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00730000111424 #31	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000162007 #36	ENSGT00390000017652
Elephant	MODERN SPECIES	270	ENSLAFG00000026562	MIB2 (ENSLAFG00000004938)	ENSLAFG00000027479	ENSLAFG00000002076 ##7	ATAD3A (ENSLAFG00000027561) #9	VWA1 (ENSLAFG00000007325) #12	TMEM88B (ENSLAFG00000000524) #13	ANKRD65 (ENSLAFG00000030927) #14	MRPL20 (ENSLAFG00000010706) #15	CCNL2 (ENSLAFG00000022021) #16	AURKAIP1 (ENSLAFG00000028609) #17	MXRA8 (ENSLAFG00000032320) #18	DVL1 (ENSLAFG00000032467) #19	TAS1R3 (ENSLAFG00000031360) #20	CPTP (ENSLAFG00000027970) #21	INTS11 (ENSLAFG00000013687) #22	PUSL1 (ENSLAFG00000013685) #23	ACAP3 (ENSLAFG00000013680) #24	ENSLAFG00000022357 #25	UBE2J2 (ENSLAFG00000002224) #26	C1QTNF12 (ENSLAFG00000011406) #27	B3GALT6 (ENSLAFG00000027672) #28	SDF4 (ENSLAFG00000030804) #29	TNFRSF4 (ENSLAFG00000003705) #30	TNFRSF18 (ENSLAFG00000016877) #31	TTLL10 (ENSLAFG00000021523) #32	C1orf159 (ENSLAFG00000025682) #33	RNF223 (ENSLAFG00000027754) #34	AGRN (ENSLAFG00000023252) #35	ISG15 (ENSLAFG00000015773) #36	ENSLAFG00000028505
Hyrax	MODERN SPECIES	4482												MXRA8 (ENSPCAG00000002544) #18	DVL1 (ENSPCAG00000002462) #19	TAS1R3 (ENSPCAG00000002398) #20	CPTP (ENSPCAG00000002379) #21	INTS11 (ENSPCAG00000002309) #22	PUSL1 (ENSPCAG00000002272) #23	ACAP3 (ENSPCAG00000002154) #24	ENSPCAG00000002052 #25
Tenrec	MODERN SPECIES	2477																INTS11 (ENSETEG00000002094) #22
Xenarthra	ANCESTRAL SPECIES	113		ENSGT00940000158459	ENSGT00940000158097	ENSGT00940000167258	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111424 #31	ENSGT00940000160919 #32
Armadillo	MODERN SPECIES	4570	ENSDNOG00000035097	ENSDNOG00000038194	ENSDNOG00000043916 ##7	ENSDNOG00000032378 #8	ENSDNOG00000036970	ATAD3A (ENSDNOG00000016880) #9	VWA1 (ENSDNOG00000036373) #12	ENSDNOG00000038768 #14	MRPL20 (ENSDNOG00000044958) #15	CCNL2 (ENSDNOG00000018721) #16	AURKAIP1 (ENSDNOG00000046170) #17	ENSDNOG00000034141	DVL1 (ENSDNOG00000033639) #19	TAS1R3 (ENSDNOG00000042802) #20	CPTP (ENSDNOG00000042160) #21	INTS11 (ENSDNOG00000025863) #22	ACAP3 (ENSDNOG00000031717) #24	ENSDNOG00000049004 #25	UBE2J2 (ENSDNOG00000043867) #26	ENSDNOG00000047314 #27	B3GALT6 (ENSDNOG00000032924) #28	SDF4 (ENSDNOG00000037404) #29	ENSDNOG00000048375 #31	TTLL10 (ENSDNOG00000034694) #32
Marsupialia	ANCESTRAL SPECIES	10	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b.a.a #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35
Opossum	MODERN SPECIES	1	MMP23B (ENSMODG00000006736)	MIB2 (ENSMODG00000006713)	ENSMODG00000049494	ENSMODG00000039228	ENSMODG00000006616 ##7	ATAD3A (ENSMODG00000006603) #9	VWA1 (ENSMODG00000006572) #12	ENSMODG00000037858 #15	ENSMODG00000006555 #16	ENSMODG00000006547	ENSMODG00000006423 #17	MXRA8 (ENSMODG00000006413) #18	DVL1 (ENSMODG00000006382) #19	TAS1R3 (ENSMODG00000006323) #20	CPTP (ENSMODG00000006296) #21	INTS11 (ENSMODG00000006290) #22	ENSMODG00000027970	ENSMODG00000009507	ENSMODG00000047763	ENSMODG00000009263	CAMSAP2 (ENSMODG00000012889)	DDX59 (ENSMODG00000012873)	KIF14 (ENSMODG00000012853)	ENSMODG00000012840	NR5A2 (ENSMODG00000012833)	ENSMODG00000012821	PTPRC (ENSMODG00000012814)	ENSMODG00000012794	ENSMODG00000050080	NEK7 (ENSMODG00000012789)	LHX9 (ENSMODG00000012746)
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b.a.a #24	ENSGT00940000156199.b.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A
Diprotodontia	ANCESTRAL SPECIES	3	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b.a.a #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
Wallaby	MODERN SPECIES	7844																INTS11 (ENSMEUG00000011664) #22	ENSMEUG00000011649 #23
Diprotodontia_a	ANCESTRAL SPECIES	4	ENSGT00550000076432	ENSGT00390000010165.i.a ##7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00730000111599 #13	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b.a.a #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000162007 #36
koala	DUPLICATION
koala	MODERN SPECIES	8	FNDC10 (ENSPCIG00000007732)	ENSPCIG00000007735 ##7	TMEM240 (ENSPCIG00000007738) #8	ATAD3A (ENSPCIG00000007739) #9	VWA1 (ENSPCIG00000007741) #12	ENSPCIG00000007744 #13	ENSPCIG00000007746 #14	MRPL20 (ENSPCIG00000007747) #15	CCNL2 (ENSPCIG00000007749) #16	ENSPCIG00000007754	ENSPCIG00000007756 #17	MXRA8 (ENSPCIG00000007762) #18	DVL1 (ENSPCIG00000007765) #19	TAS1R3 (ENSPCIG00000007773) #20	CPTP (ENSPCIG00000035445) #21	ENSPCIG00000007815 #22	ENSPCIG00000035025	PUSL1 (ENSPCIG00000007816) #23	ACAP3 (ENSPCIG00000007817) #24	ENSPCIG00000007823 #25	UBE2J2 (ENSPCIG00000007825) #26	C1QTNF12 (ENSPCIG00000007826) #27	B3GALT6 (ENSPCIG00000010543) #28	SDF4 (ENSPCIG00000010544) #29	ENSPCIG00000010548 #30	ENSPCIG00000010552	ENSPCIG00000010563 #32	ENSPCIG00000018030	C1orf159 (ENSPCIG00000034265) #33	RNF223 (ENSPCIG00000010570) #34	ENSPCIG00000010582
koala	MODERN SPECIES	197							POSTN (ENSPCIG00000018838)	TRPC4 (ENSPCIG00000004362)	ENSPCIG00000004578	UFM1 (ENSPCIG00000030753)	FREM2 (ENSPCIG00000037129)	STOML3 (ENSPCIG00000021472)	PROSER1 (ENSPCIG00000021474)	NHLRC3 (ENSPCIG00000021476)	COG6 (ENSPCIG00000024515)	ENSPCIG00000023187 #22	ENSPCIG00000035813	ENSPCIG00000023178	FOXO1 (ENSPCIG00000023175)	MRPS31 (ENSPCIG00000023173)	SLC25A15 (ENSPCIG00000037032)	ENSPCIG00000007124	THSD1 (ENSPCIG00000007135)	VPS36 (ENSPCIG00000007138)	ENSPCIG00000007145	NEK3 (ENSPCIG00000007151)	NEK5 (ENSPCIG00000007170)	ALG11 (ENSPCIG00000007175)	ATP7B (ENSPCIG00000007182)	CCDC70 (ENSPCIG00000007188)	ENSPCIG00000033940
Common wonbat	MODERN SPECIES	686	ENSVURG00010023641	ENSVURG00010023639	ENSVURG00010023638 ##7	TMEM240 (ENSVURG00010023637) #8	ATAD3A (ENSVURG00010023635) #9	VWA1 (ENSVURG00010023632) #12	ENSVURG00010023631 #13	ENSVURG00010023628 #14	MRPL20 (ENSVURG00010023626) #15	CCNL2 (ENSVURG00010023621) #16	AURKAIP1 (ENSVURG00010023620) #17	MXRA8 (ENSVURG00010023619) #18	DVL1 (ENSVURG00010023616) #19	TAS1R3 (ENSVURG00010023615) #20	CPTP (ENSVURG00010023613) #21	INTS11 (ENSVURG00010023611) #22	ENSVURG00010023609 #23	ACAP3 (ENSVURG00010023608) #24	ENSVURG00010023607 #25	ENSVURG00010023606 #26	C1QTNF12 (ENSVURG00010023605) #27	B3GALT6 (ENSVURG00010023604) #28	SDF4 (ENSVURG00010023603) #29	ENSVURG00010023602 #30	ENSVURG00010023601	C1orf159 (ENSVURG00010023598) #33	RNF223 (ENSVURG00010023597) #34	ENSVURG00010023596	AGRN (ENSVURG00010023595) #35	ENSVURG00010023594 #36	ENSVURG00010023592 #37
Tasmanian devil	MODERN SPECIES	2	FNDC10 (ENSSHAG00000025902)	ENSSHAG00000023374 ##7	TMEM240 (ENSSHAG00000029480) #8	ATAD3A (ENSSHAG00000009157) #9	VWA1 (ENSSHAG00000008869) #12	ENSSHAG00000028204 #13	ENSSHAG00000023508 #14	MRPL20 (ENSSHAG00000023055) #15	CCNL2 (ENSSHAG00000027314) #16	ENSSHAG00000007257	ENSSHAG00000030603 #17	MXRA8 (ENSSHAG00000006827) #18	ENSSHAG00000031079 #19	TAS1R3 (ENSSHAG00000005815) #20	CPTP (ENSSHAG00000024291) #21	INTS11 (ENSSHAG00000005068) #22	PUSL1 (ENSSHAG00000032238) #23	ACAP3 (ENSSHAG00000003215) #24	ENSSHAG00000002980	ENSSHAG00000002485 #25	UBE2J2 (ENSSHAG00000026074) #26	C1QTNF12 (ENSSHAG00000008918) #27	SDF4 (ENSSHAG00000025625) #29	B3GALT6 (ENSSHAG00000024084) #28	ENSSHAG00000024417 #30	ENSSHAG00000023460	ENSSHAG00000006394 #32	ENSSHAG00000026556 #33	RNF223 (ENSSHAG00000024095) #34	ENSSHAG00000003395	AGRN (ENSSHAG00000004574) #35
Platypus	MODERN SPECIES	16	ENSOANG00000040529	FNDC10 (ENSOANG00000036706)	ENSOANG00000042602 #7	ENSOANG00000036772 #8	ATAD3A (ENSOANG00000039836) #9	ENSOANG00000037683 #12	ENSOANG00000042755 #14	MRPL20 (ENSOANG00000045680) #15	ENSOANG00000036831	CCNL2 (ENSOANG00000038259) #16	AURKAIP1 (ENSOANG00000046277) #17	ENSOANG00000004678 #18	DVL1 (ENSOANG00000046714) #19	TAS1R3 (ENSOANG00000046463) #20	CPTP (ENSOANG00000013024) #21	INTS11 (ENSOANG00000013023) #22	PUSL1 (ENSOANG00000036340) #23	ACAP3 (ENSOANG00000048691) #24	ENSOANG00000001638 #25	UBE2J2 (ENSOANG00000006753) #26	ENSOANG00000030536 #27	B3GALT6 (ENSOANG00000049848) #28	SDF4 (ENSOANG00000004787) #29	ENSOANG00000043975 #30	ENSOANG00000022143	ENSOANG00000037711	C1orf159 (ENSOANG00000021823) #33	RNF223 (ENSOANG00000048509) #34	ENSOANG00000011559	AGRN (ENSOANG00000013792) #35	HES4 (ENSOANG00000049111) #37
Sauria	ANCESTRAL SPECIES	19	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A
Lepidosauria	ANCESTRAL SPECIES	34	ENSGT00940000165349.d.a.a	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT01100000265027	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A
tuatara	MODERN SPECIES	194			ENSSPUG00000016993	ENSSPUG00000016969	ENSSPUG00000016958 #7	ENSSPUG00000016949	TMEM240 (ENSSPUG00000016942) #8	ATAD3A (ENSSPUG00000016929) #9	VWA1 (ENSSPUG00000016917) #12	MRPL20 (ENSSPUG00000016911) #15	CCNL2 (ENSSPUG00000016884) #16	AURKAIP1 (ENSSPUG00000016876) #17	MXRA8 (ENSSPUG00000016866) #18	DVL1 (ENSSPUG00000016835) #19	CPTP (ENSSPUG00000016820) #21	INTS11 (ENSSPUG00000016767) #22	ENSSPUG00000016743	ACAP3 (ENSSPUG00000016564) #24
Episquamata	ANCESTRAL SPECIES	16	ENSGT00940000165349.d.a.a	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT01100000265027	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A
Toxicofera	ANCESTRAL SPECIES	25	ENSGT00550000076432	ENSGT00940000165349.d.a.a	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35
Elapidae	ANCESTRAL SPECIES	7	ENSGT00940000165349.d.a.a	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823.g.a #15	ENSGT00940000169328.a.b	ENSGT00390000015823.g.b #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a.w.a #19	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000163056 #37
Indian cobra	MODERN SPECIES	9	ENSNNAG00000010807	FNDC10 (ENSNNAG00000010915)	ENSNNAG00000010935	ENSNNAG00000010944 #7	TMEM240 (ENSNNAG00000010972) #8	ATAD3A (ENSNNAG00000010987) #9	VWA1 (ENSNNAG00000011062) #12	ENSNNAG00000011080	ENSNNAG00000011089	MRPL20 (ENSNNAG00000011104) #15	CCNL2 (ENSNNAG00000011131) #16	AURKAIP1 (ENSNNAG00000011250) #17	MXRA8 (ENSNNAG00000011263) #18	ENSNNAG00000011298 #19	CPTP (ENSNNAG00000011385) #21	INTS11 (ENSNNAG00000011406) #22	ENSNNAG00000011530	PUSL1 (ENSNNAG00000011544) #23	ACAP3 (ENSNNAG00000011608) #24	ENSNNAG00000011980	ENSNNAG00000012001 #25	UBE2J2 (ENSNNAG00000012015) #26	C1QTNF12 (ENSNNAG00000012048) #27	TTLL10 (ENSNNAG00000012071) #32	C1orf159 (ENSNNAG00000012111) #33	ENSNNAG00000012162	HES4 (ENSNNAG00000012256) #37	ENSNNAG00000012280	NOC2L (ENSNNAG00000012390)	SAMD11 (ENSNNAG00000013164)	ENSNNAG00000013177
Elapidae_a	ANCESTRAL SPECIES	38	ENSGT00940000158097	ENSGT00550000076432	ENSGT00940000165349.d.a.a	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823.g.a #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a.w.a #19	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B.g #29	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000163056 #37
Acanthophiinae	ANCESTRAL SPECIES	38	ENSGT00940000158097	ENSGT00550000076432	ENSGT00940000165349.d.a.a	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823.g.a #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a.w.a #19	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B.g #29	ENSGT00940000160919 #32	ENSGT00390000009794.a #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000163056 #37
Eastern brown snake	MODERN SPECIES	79	FNDC10 (ENSPTXG00000010786)	ENSPTXG00000010785	ENSPTXG00000010783 #7	TMEM240 (ENSPTXG00000010782) #8	ATAD3A (ENSPTXG00000010781) #9	VWA1 (ENSPTXG00000010776) #12	ENSPTXG00000010766	ANKRD65 (ENSPTXG00000010765) #14	ENSPTXG00000010759 #15	ENSPTXG00000010758 #16	ENSPTXG00000010757 #16	AURKAIP1 (ENSPTXG00000010756) #17	MXRA8 (ENSPTXG00000010754) #18	DVL1 (ENSPTXG00000010753) #19	CPTP (ENSPTXG00000010752) #21	INTS11 (ENSPTXG00000010750) #22	ENSPTXG00000010749	ENSPTXG00000010747 #23	ACAP3 (ENSPTXG00000010744) #24	ENSPTXG00000010741	SCNN1D (ENSPTXG00000010736) #25	UBE2J2 (ENSPTXG00000010735) #26	B3GALT6 (ENSPTXG00000010733) #28	SDF4 (ENSPTXG00000010731) #29	TTLL10 (ENSPTXG00000010730) #32	ENSPTXG00000010729 #33	ENSPTXG00000010728 #33	RNF223 (ENSPTXG00000010727) #34	ENSPTXG00000010725	AGRN (ENSPTXG00000007829) #35	HES4 (ENSPTXG00000007821) #37
Mainland tiger snake	MODERN SPECIES	157	ENSNSUG00000012340	ENSNSUG00000012342	ENSNSUG00000012343 #7	TMEM240 (ENSNSUG00000012344) #8	ATAD3A (ENSNSUG00000012345) #9	VWA1 (ENSNSUG00000012346) #12	ENSNSUG00000000067	ANKRD65 (ENSNSUG00000000097) #14	ENSNSUG00000000116 #15	ENSNSUG00000000123 #16	ENSNSUG00000000135 #16	AURKAIP1 (ENSNSUG00000000143) #17	MXRA8 (ENSNSUG00000000154) #18	ENSNSUG00000000179 #19	CPTP (ENSNSUG00000000185) #21	INTS11 (ENSNSUG00000000206) #22	ENSNSUG00000001442	PUSL1 (ENSNSUG00000001444) #23	ACAP3 (ENSNSUG00000001447) #24	ENSNSUG00000001549	SCNN1D (ENSNSUG00000001551) #25	ENSNSUG00000001555	UBE2J2 (ENSNSUG00000001557) #26	C1QTNF12 (ENSNSUG00000001558) #27	B3GALT6 (ENSNSUG00000001562) #28	ENSNSUG00000001563 #29	TTLL10 (ENSNSUG00000001568) #32	C1orf159 (ENSNSUG00000001584) #33	RNF223 (ENSNSUG00000001596) #34	ENSNSUG00000001598	AGRN (ENSNSUG00000001611) #35
Blue-lipped sea krait	MODERN SPECIES	5179								ENSLLTG00000010973	ANKRD65 (ENSLLTG00000010982) #14	MRPL20 (ENSLLTG00000011007) #15	CCNL2 (ENSLLTG00000011026) #16	AURKAIP1 (ENSLLTG00000011093) #17	MXRA8 (ENSLLTG00000011121) #18	DVL1 (ENSLLTG00000004731) #19	CPTP (ENSLLTG00000004744) #21	INTS11 (ENSLLTG00000004753) #22	ENSLLTG00000004774	PUSL1 (ENSLLTG00000004778) #23
Lizard	MODERN SPECIES	1359												DVL1 (ENSACAG00000013652) #19	ENSACAG00000022407	TAS1R3 (ENSACAG00000013878) #20	CPTP (ENSACAG00000036606) #21	INTS11 (ENSACAG00000013975) #22	ENSACAG00000014106	PUSL1 (ENSACAG00000014111) #23	ENSACAG00000035039
Laterata	DUPLICATION
Laterata	ANCESTRAL SPECIES																	ENSGT00940000157644.a #22
Common wall lizard	MODERN SPECIES	16	ENSPMRG00000014290 #7	ENSPMRG00000014282	ATAD3A (ENSPMRG00000014266) #9	VWA1 (ENSPMRG00000014245) #12	ENSPMRG00000014206	ANKRD65 (ENSPMRG00000014199) #14	MRPL20 (ENSPMRG00000014195) #15	CCNL2 (ENSPMRG00000014186) #16	ENSPMRG00000014180	AURKAIP1 (ENSPMRG00000014175) #17	MXRA8 (ENSPMRG00000014170) #18	DVL1 (ENSPMRG00000014160) #19	ENSPMRG00000014148	TAS1R3 (ENSPMRG00000014138) #20	CPTP (ENSPMRG00000014133) #21	INTS11 (ENSPMRG00000014116) #22	ENSPMRG00000013914 #22	ENSPMRG00000013883	ENSPMRG00000013876 #23	ACAP3 (ENSPMRG00000013857) #24	ENSPMRG00000013849	ENSPMRG00000013840 #25	ENSPMRG00000013827 #25	C1QTNF12 (ENSPMRG00000013820) #27	B3GALT6 (ENSPMRG00000013819) #28	SDF4 (ENSPMRG00000013812) #29	ENSPMRG00000013809	ENSPMRG00000013788	C1orf159 (ENSPMRG00000013767) #33	RNF223 (ENSPMRG00000013761) #34	ENSPMRG00000013756
Laterata	ANCESTRAL SPECIES	29	ENSGT00940000165349.d.a.a	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644.b #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685.a #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT01100000265027	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A
Common wall lizard	MODERN SPECIES	16	ENSPMRG00000014282	ATAD3A (ENSPMRG00000014266) #9	VWA1 (ENSPMRG00000014245) #12	ENSPMRG00000014206	ANKRD65 (ENSPMRG00000014199) #14	MRPL20 (ENSPMRG00000014195) #15	CCNL2 (ENSPMRG00000014186) #16	ENSPMRG00000014180	AURKAIP1 (ENSPMRG00000014175) #17	MXRA8 (ENSPMRG00000014170) #18	DVL1 (ENSPMRG00000014160) #19	ENSPMRG00000014148	TAS1R3 (ENSPMRG00000014138) #20	CPTP (ENSPMRG00000014133) #21	INTS11 (ENSPMRG00000014116) #22	ENSPMRG00000013914 #22	ENSPMRG00000013883	ENSPMRG00000013876 #23	ACAP3 (ENSPMRG00000013857) #24	ENSPMRG00000013849	ENSPMRG00000013840 #25	ENSPMRG00000013827 #25	C1QTNF12 (ENSPMRG00000013820) #27	B3GALT6 (ENSPMRG00000013819) #28	SDF4 (ENSPMRG00000013812) #29	ENSPMRG00000013809	ENSPMRG00000013788	C1orf159 (ENSPMRG00000013767) #33	RNF223 (ENSPMRG00000013761) #34	ENSPMRG00000013756	AGRN (ENSPMRG00000013698) #35
Argentine black and white tegu	MODERN SPECIES	60	ENSSMRG00000009080	FNDC10 (ENSSMRG00000009081)	ENSSMRG00000009082	ENSSMRG00000009084 #7	TMEM240 (ENSSMRG00000009086) #8	ATAD3A (ENSSMRG00000009089) #9	VWA1 (ENSSMRG00000009114) #12	ENSSMRG00000009115	ANKRD65 (ENSSMRG00000009116) #14	CCNL2 (ENSSMRG00000009118) #16	AURKAIP1 (ENSSMRG00000009119) #17	MXRA8 (ENSSMRG00000009120) #18	DVL1 (ENSSMRG00000009123) #19	TAS1R3 (ENSSMRG00000009124) #20	CPTP (ENSSMRG00000009125) #21	INTS11 (ENSSMRG00000009127) #22	ENSSMRG00000009132	PUSL1 (ENSSMRG00000009133) #23	ACAP3 (ENSSMRG00000009142) #24	ENSSMRG00000009144	ENSSMRG00000009162 #25	UBE2J2 (ENSSMRG00000009163) #26	C1QTNF12 (ENSSMRG00000009165) #27	B3GALT6 (ENSSMRG00000009170) #28	SDF4 (ENSSMRG00000009171) #29	ENSSMRG00000009172	ENSSMRG00000009174	TTLL10 (ENSSMRG00000009175) #32	C1orf159 (ENSSMRG00000009181) #33	RNF223 (ENSSMRG00000009182) #34	ENSSMRG00000009184
Archelosauria	ANCESTRAL SPECIES	23	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A
Archosauria	ANCESTRAL SPECIES	21	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000169328.a.b	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT01100000265027	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A
Aves	ANCESTRAL SPECIES	27	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT01100000265027	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35
Neognathae	ANCESTRAL SPECIES	25	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT01100000265027	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35
Galloanserae	ANCESTRAL SPECIES	24	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000163056 #37
Anatidae	ANCESTRAL SPECIES	19	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000163056 #37
Pink-footed goose	MODERN SPECIES	41	ENSABRG00000006890	FNDC10 (ENSABRG00000006894)	ENSABRG00000006898 #7	TMEM240 (ENSABRG00000006900) #8	ATAD3A (ENSABRG00000006913) #9	VWA1 (ENSABRG00000006994) #12	ENSABRG00000006997	MRPL20 (ENSABRG00000007001) #15	CCNL2 (ENSABRG00000007004) #16	ENSABRG00000007012	AURKAIP1 (ENSABRG00000007020) #17	MXRA8 (ENSABRG00000007026) #18	DVL1 (ENSABRG00000007033) #19	TAS1R3 (ENSABRG00000007043) #20	CPTP (ENSABRG00000007048) #21	INTS11 (ENSABRG00000007053) #22	ENSABRG00000007057	PUSL1 (ENSABRG00000007062) #23	ACAP3 (ENSABRG00000007080) #24	SCNN1D (ENSABRG00000007113) #25	UBE2J2 (ENSABRG00000007132) #26	C1QTNF12 (ENSABRG00000007133) #27	SDF4 (ENSABRG00000007140) #29	B3GALT6 (ENSABRG00000007144) #28	ENSABRG00000007147	ENSABRG00000007156	TTLL10 (ENSABRG00000007172) #32	C1orf159 (ENSABRG00000007189) #33	RNF223 (ENSABRG00000007195) #34	ENSABRG00000007201	AGRN (ENSABRG00000007231) #35
Duck	MODERN SPECIES	13	ENSAPLG00000008453	FNDC10 (ENSAPLG00000030956)	ENSAPLG00000008354 #7	TMEM240 (ENSAPLG00000008351) #8	ATAD3A (ENSAPLG00000007627) #9	VWA1 (ENSAPLG00000007608) #12	ENSAPLG00000007549	MRPL20 (ENSAPLG00000022210) #15	CCNL2 (ENSAPLG00000007159) #16	ENSAPLG00000006980	AURKAIP1 (ENSAPLG00000006914) #17	MXRA8 (ENSAPLG00000006806) #18	DVL1 (ENSAPLG00000006207) #19	TAS1R3 (ENSAPLG00000005810) #20	CPTP (ENSAPLG00000005804) #21	INTS11 (ENSAPLG00000005238) #22	ENSAPLG00000001589	PUSL1 (ENSAPLG00000004946) #23	SCNN1D (ENSAPLG00000003451) #25	UBE2J2 (ENSAPLG00000003153) #26	C1QTNF12 (ENSAPLG00000003073) #27	B3GALT6 (ENSAPLG00000003068) #28	SDF4 (ENSAPLG00000002823) #29	ENSAPLG00000002747	TTLL10 (ENSAPLG00000002326) #32	C1orf159 (ENSAPLG00000002131) #33	ENSAPLG00000028056	PLEKHN1 (ENSAPLG00000008187)	KLHL17 (ENSAPLG00000008387)	NOC2L (ENSAPLG00000008755)	SAMD11 (ENSAPLG00000009193)
Phasianidae	ANCESTRAL SPECIES	23	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000163056 #37
Phasianidae_b	ANCESTRAL SPECIES	30	ENSGT00940000158097	ENSGT00940000164637	ENSGT00960000189725	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000163056 #37
Chicken	MODERN SPECIES	13	MIB2 (ENSGALG00010020237)	ENSGALG00010020254	ENSGALG00010020259	SSU72 (ENSGALG00010020261) #7	TMEM240 (ENSGALG00010021101) #8	ATAD3A (ENSGALG00010017714) #9	VWA1 (ENSGALG00010017721) #12	TMEM88B (ENSGALG00010017749)	MRPL20 (ENSGALG00010017739) #15	CCNL2 (ENSGALG00010017791) #16	ENSGALG00010017814	MXRA8 (ENSGALG00010017974) #18	DVL1 (ENSGALG00010018012) #19	TAS1R3 (ENSGALG00010018024) #20	CPTP (ENSGALG00010018025) #21	INTS11 (ENSGALG00010018044) #22	ENSGALG00010018160	PUSL1 (ENSGALG00010018278) #23	ACAP3 (ENSGALG00010018308) #24	SCNN1D (ENSGALG00010018450) #25	UBE2J2 (ENSGALG00010016541) #26	C1QTNF12 (ENSGALG00010016546) #27	B3GALT6 (ENSGALG00010021498) #28	SDF4 (ENSGALG00010021513) #29	TNFRSF4 (ENSGALG00010021521)	TNFRSF18 (ENSGALG00010021538)	ENSGALG00010021578	TTLL10 (ENSGALG00010021620) #32	C21H1orf159 (ENSGALG00010021636) #33	RNF223 (ENSGALG00010021660) #34	ENSGALG00010021706
Turkey	MODERN SPECIES	15	ENSMGAG00000003375 #35	ENSMGAG00000003314 #34	ENSMGAG00000003319	ENSMGAG00000003296 #33	ENSMGAG00000003277 #32	ENSMGAG00000003216 #29	ENSMGAG00000003240	ENSMGAG00000003257	ENSMGAG00000003204 #28	ACAP3 (ENSMGAG00000003066) #24	SCNN1D (ENSMGAG00000003127) #25	UBE2J2 (ENSMGAG00000003175) #26	C1QTNF12 (ENSMGAG00000003189) #27	ENSMGAG00000002827 #17	ENSMGAG00000002988 #20	ENSMGAG00000002879 #22	CPTP (ENSMGAG00000003030) #21	ENSMGAG00000021772	ENSMGAG00000003037 #23	ENSMGAG00000002918 #19	ENSMGAG00000018756 #20	ENSMGAG00000002810	MXRA8 (ENSMGAG00000002845) #18	ENSMGAG00000002784 #16	ENSMGAG00000002758 #12	ENSMGAG00000002771	ENSMGAG00000018736 #15	TMEM240 (ENSMGAG00000002736) #8	ATAD3A (ENSMGAG00000002740) #9	ENSMGAG00000002702 #7	ENSMGAG00000002637
Japanese quail	MODERN SPECIES	13	ENSCJPG00005010120	FNDC10 (ENSCJPG00005010121)	ENSCJPG00005010122 #7	TMEM240 (ENSCJPG00005010123) #8	ATAD3A (ENSCJPG00005010124) #9	VWA1 (ENSCJPG00005010125) #12	ENSCJPG00005010126	MRPL20 (ENSCJPG00005010127) #15	CCNL2 (ENSCJPG00005010128) #16	ENSCJPG00005010129	AURKAIP1 (ENSCJPG00005010130) #17	MXRA8 (ENSCJPG00005010131) #18	DVL1 (ENSCJPG00005010132) #19	TAS1R3 (ENSCJPG00005010133) #20	CPTP (ENSCJPG00005010134) #21	INTS11 (ENSCJPG00005010135) #22	ENSCJPG00005010264	PUSL1 (ENSCJPG00005010265) #23	ACAP3 (ENSCJPG00005010269) #24	SCNN1D (ENSCJPG00005011211) #25	UBE2J2 (ENSCJPG00005011212) #26	B3GALT6 (ENSCJPG00005011218) #28	SDF4 (ENSCJPG00005011220) #29	ENSCJPG00005011221	ENSCJPG00005011223	TTLL10 (ENSCJPG00005011227) #32	C1orf159 (ENSCJPG00005011233) #33	RNF223 (ENSCJPG00005011238) #34	ENSCJPG00005011239	AGRN (ENSCJPG00005011243) #35	HES4 (ENSCJPG00005011253) #37
Neognathae_b	ANCESTRAL SPECIES	25	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT01100000265027	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35
Passeriformes	ANCESTRAL SPECIES	22	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT01100000265027	ENSGT00940000166589	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000163056 #37	ENSGT00390000017652
Passeriformes_d	ANCESTRAL SPECIES	22	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00390000015823 #15	ENSGT00940000159239.a #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00940000166589	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000163056 #37	ENSGT00390000017652	ENSGT00390000003618	ENSGT00940000157635
Passeriformes_g	ANCESTRAL SPECIES	30	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00390000015823 #15	ENSGT00940000159239.a #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000163056 #37	ENSGT00390000017652	ENSGT00390000003618	ENSGT00940000157635	ENSGT00390000010057
Medium ground finch	MODERN SPECIES	153													DVL1 (ENSGFOG00000010226) #19	TAS1R3 (ENSGFOG00000010259) #20	CPTP (ENSGFOG00000010268) #21	INTS11 (ENSGFOG00000010277) #22	PUSL1 (ENSGFOG00000010287) #23	ACAP3 (ENSGFOG00000010301) #24	SCNN1D (ENSGFOG00000010350) #25	UBE2J2 (ENSGFOG00000010384) #26	C1QTNF12 (ENSGFOG00000010399) #27	SDF4 (ENSGFOG00000010410) #29	ENSGFOG00000010419	C1orf159 (ENSGFOG00000010432) #33	AGRN (ENSGFOG00000010445) #35	ENSGFOG00000010457	ENSGFOG00000010464	KLHL17 (ENSGFOG00000010469)	NOC2L (ENSGFOG00000010478)	ENSGFOG00000010500	RERE (ENSGFOG00000010547)
Passeroidea	ANCESTRAL SPECIES	26	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00390000015823 #15	ENSGT00940000159239.a #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000158337 #35	ENSGT00940000163056 #37	ENSGT00390000017652	ENSGT00390000003618	ENSGT00940000157635	ENSGT00390000010057
Zebra finch	MODERN SPECIES	14	ENSTGUG00000003080	FNDC10 (ENSTGUG00000022277)	ENSTGUG00000021162 #7	TMEM240 (ENSTGUG00000003081) #8	ATAD3A (ENSTGUG00000003082) #9	VWA1 (ENSTGUG00000003108) #12	ENSTGUG00000003111	MRPL20 (ENSTGUG00000003113) #15	CCNL2 (ENSTGUG00000003114) #16	ENSTGUG00000019705	AURKAIP1 (ENSTGUG00000003131) #17	MXRA8 (ENSTGUG00000003136) #18	DVL1 (ENSTGUG00000003140) #19	TAS1R3 (ENSTGUG00000003175) #20	CPTP (ENSTGUG00000023000) #21	INTS11 (ENSTGUG00000003192) #22	PUSL1 (ENSTGUG00000003214) #23	ACAP3 (ENSTGUG00000003217) #24	CORT (ENSTGUG00000016939)	ENSTGUG00000003252	TARDBP (ENSTGUG00000003255)	ENSTGUG00000021390	CASZ1 (ENSTGUG00000003269)	PEX14 (ENSTGUG00000003272)	DFFA (ENSTGUG00000003289)	CENPS (ENSTGUG00000003298)	PGD (ENSTGUG00000003302)	KIF1B (ENSTGUG00000003304)	UBE4B (ENSTGUG00000003533)	RBP7 (ENSTGUG00000019849)	NMNAT1 (ENSTGUG00000019912)
Common canary	MODERN SPECIES	34	MMP23B (ENSSCAG00000017326)	MIB2 (ENSSCAG00000017322)	ENSSCAG00000017316 #7	TMEM240 (ENSSCAG00000017315) #8	ATAD3A (ENSSCAG00000017311) #9	VWA1 (ENSSCAG00000017304) #12	ENSSCAG00000017300	MRPL20 (ENSSCAG00000017299) #15	ENSSCAG00000017297 #16	ENSSCAG00000017294 #16	ENSSCAG00000017292	AURKAIP1 (ENSSCAG00000017290) #17	MXRA8 (ENSSCAG00000017289) #18	DVL1 (ENSSCAG00000017288) #19	TAS1R3 (ENSSCAG00000017285) #20	INTS11 (ENSSCAG00000017282) #22	PUSL1 (ENSSCAG00000017280) #23	ENSSCAG00000017279 #25	UBE2J2 (ENSSCAG00000017275) #26	ENSSCAG00000017274	C1QTNF12 (ENSSCAG00000017271) #27	B3GALT6 (ENSSCAG00000017270) #28	SDF4 (ENSSCAG00000017269) #29	ENSSCAG00000017264 #33	RNF223 (ENSSCAG00000017261) #34	ENSSCAG00000017254	PLEKHN1 (ENSSCAG00000017252)	KLHL17 (ENSSCAG00000017248)	NOC2L (ENSSCAG00000017217)	SAMD11 (ENSSCAG00000017189)	RERE (ENSSCAG00000017166)
Flycatcher	MODERN SPECIES	13	ENSFALG00000009373	ENSFALG00000009357 #7	TMEM240 (ENSFALG00000025182) #8	ATAD3A (ENSFALG00000009350) #9	VWA1 (ENSFALG00000009346) #12	ENSFALG00000026644	MRPL20 (ENSFALG00000023151) #15	ENSFALG00000025789 #16	ENSFALG00000025092 #16	ENSFALG00000009307	AURKAIP1 (ENSFALG00000027981) #17	MXRA8 (ENSFALG00000009292) #18	ENSFALG00000009254 #19	ENSFALG00000022883 #19	TAS1R3 (ENSFALG00000009241) #20	INTS11 (ENSFALG00000009231) #22	ACAP3 (ENSFALG00000009219) #24	SCNN1D (ENSFALG00000010133) #25	UBE2J2 (ENSFALG00000010121) #26	B3GALT6 (ENSFALG00000014593) #28	SDF4 (ENSFALG00000009090) #29	ENSFALG00000024070	ENSFALG00000025742 #35	ENSFALG00000023048	ENSFALG00000024896	HES4 (ENSFALG00000026444) #37	ENSFALG00000028058	ENSFALG00000025083	ENSFALG00000007414	KLHL17 (ENSFALG00000007404)	NOC2L (ENSFALG00000007392)
Great tit	MODERN SPECIES	13	ENSPMJG00000014081	FNDC10 (ENSPMJG00000014082)	ENSPMJG00000014083 #7	TMEM240 (ENSPMJG00000014084) #8	ATAD3A (ENSPMJG00000014085) #9	VWA1 (ENSPMJG00000014086) #12	ENSPMJG00000014087	MRPL20 (ENSPMJG00000014088) #15	CCNL2 (ENSPMJG00000014089) #16	ENSPMJG00000014091	AURKAIP1 (ENSPMJG00000014093) #17	MXRA8 (ENSPMJG00000014096) #18	DVL1 (ENSPMJG00000014107) #19	TAS1R3 (ENSPMJG00000014111) #20	CPTP (ENSPMJG00000014146) #21	INTS11 (ENSPMJG00000014148) #22	ENSPMJG00000014153	PUSL1 (ENSPMJG00000014154) #23	ACAP3 (ENSPMJG00000014164) #24	SCNN1D (ENSPMJG00000014397) #25	UBE2J2 (ENSPMJG00000014400) #26	C1QTNF12 (ENSPMJG00000014401) #27	B3GALT6 (ENSPMJG00000014402) #28	SDF4 (ENSPMJG00000014403) #29	ENSPMJG00000014404	ENSPMJG00000014405	RNF223 (ENSPMJG00000014407) #34	AGRN (ENSPMJG00000014412) #35	HES4 (ENSPMJG00000014464) #37	ENSPMJG00000014467	ENSPMJG00000014469
Neognathae_c	ANCESTRAL SPECIES	28	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000163056 #37
Kakapo	MODERN SPECIES	10	ENSSHBG00005018534	FNDC10 (ENSSHBG00005018523)	ENSSHBG00005018519 #7	TMEM240 (ENSSHBG00005018517) #8	ATAD3A (ENSSHBG00005018514) #9	VWA1 (ENSSHBG00005018511) #12	ENSSHBG00005018507	MRPL20 (ENSSHBG00005018502) #15	CCNL2 (ENSSHBG00005018496) #16	ENSSHBG00005018489	AURKAIP1 (ENSSHBG00005018484) #17	MXRA8 (ENSSHBG00005018479) #18	DVL1 (ENSSHBG00005018474) #19	TAS1R3 (ENSSHBG00005018467) #20	CPTP (ENSSHBG00005018465) #21	INTS11 (ENSSHBG00005018460) #22	ENSSHBG00005018457	PUSL1 (ENSSHBG00005018452) #23	ACAP3 (ENSSHBG00005012486) #24	SCNN1D (ENSSHBG00005011745) #25	UBE2J2 (ENSSHBG00005000951) #26	C1QTNF12 (ENSSHBG00005000946) #27	B3GALT6 (ENSSHBG00005016610) #28	SDF4 (ENSSHBG00005016604) #29	ENSSHBG00005016594	ENSSHBG00005016580	TTLL10 (ENSSHBG00005016565) #32	C1orf159 (ENSSHBG00005016549) #33	RNF223 (ENSSHBG00005016546) #34	ENSSHBG00005016543	AGRN (ENSSHBG00005016527) #35
Golden eagle	MODERN SPECIES	22	MIB2 (ENSACCG00020011720)	ENSACCG00020011779	ENSACCG00020011811 #7	TMEM240 (ENSACCG00020011836) #8	ATAD3A (ENSACCG00020011877) #9	VWA1 (ENSACCG00020011945) #12	ENSACCG00020011974	MRPL20 (ENSACCG00020011989) #15	CCNL2 (ENSACCG00020012018) #16	ENSACCG00020012050	AURKAIP1 (ENSACCG00020012133) #17	MXRA8 (ENSACCG00020012102) #18	DVL1 (ENSACCG00020012185) #19	TAS1R3 (ENSACCG00020012228) #20	CPTP (ENSACCG00020012248) #21	INTS11 (ENSACCG00020012275) #22	ENSACCG00020012303	PUSL1 (ENSACCG00020012322) #23	ACAP3 (ENSACCG00020012349) #24	SCNN1D (ENSACCG00020012403) #25	UBE2J2 (ENSACCG00020012435) #26	C1QTNF12 (ENSACCG00020012456) #27	B3GALT6 (ENSACCG00020012487) #28	SDF4 (ENSACCG00020012498) #29	ENSACCG00020012522	ENSACCG00020012547	ENSACCG00020012577 #33	RNF223 (ENSACCG00020012609) #34	ENSACCG00020012639	AGRN (ENSACCG00020012716) #35	ENSACCG00020012797
African ostrich	MODERN SPECIES	499	MMP23B (ENSSCUG00000007497)	MIB2 (ENSSCUG00000007494)	ENSSCUG00000007492	ENSSCUG00000007489 #7	TMEM240 (ENSSCUG00000007487) #8	ATAD3A (ENSSCUG00000007479) #9	VWA1 (ENSSCUG00000007471) #12	ENSSCUG00000007470	MRPL20 (ENSSCUG00000007468) #15	ENSSCUG00000007467	CCNL2 (ENSSCUG00000007465) #16	AURKAIP1 (ENSSCUG00000007462) #17	MXRA8 (ENSSCUG00000007459) #18	DVL1 (ENSSCUG00000007456) #19	CPTP (ENSSCUG00000007455) #21	INTS11 (ENSSCUG00000007453) #22	PUSL1 (ENSSCUG00000007450) #23	ACAP3 (ENSSCUG00000007416) #24	ENSSCUG00000007365 #25	UBE2J2 (ENSSCUG00000007359) #26	C1QTNF12 (ENSSCUG00000007354) #27	B3GALT6 (ENSSCUG00000007352) #28	SDF4 (ENSSCUG00000007347) #29	ENSSCUG00000007345	ENSSCUG00000007342	ENSSCUG00000007341 #32	C1orf159 (ENSSCUG00000007337) #33	RNF223 (ENSSCUG00000007334) #34	ENSSCUG00000007327	AGRN (ENSSCUG00000007231) #35	ENSSCUG00000007151
Australian saltwater crocodile	MODERN SPECIES	45	ENSCPRG00005000461	ENSCPRG00005000473 #7	TMEM240 (ENSCPRG00005000475) #8	ATAD3A (ENSCPRG00005000483) #9	VWA1 (ENSCPRG00005000501) #12	ENSCPRG00005000546	ENSCPRG00005000553	MRPL20 (ENSCPRG00005000559) #15	CCNL2 (ENSCPRG00005000584) #16	ENSCPRG00005000679	AURKAIP1 (ENSCPRG00005000690) #17	MXRA8 (ENSCPRG00005000704) #18	DVL1 (ENSCPRG00005000724) #19	TAS1R3 (ENSCPRG00005000732) #20	CPTP (ENSCPRG00005000741) #21	INTS11 (ENSCPRG00005000746) #22	ENSCPRG00005000759	PUSL1 (ENSCPRG00005000763) #23	ACAP3 (ENSCPRG00005000932) #24	ENSCPRG00005001776	SCNN1D (ENSCPRG00005001778) #25	UBE2J2 (ENSCPRG00005001786) #26	C1QTNF12 (ENSCPRG00005001787) #27	B3GALT6 (ENSCPRG00005001807) #28	SDF4 (ENSCPRG00005001812) #29	TTLL10 (ENSCPRG00005001824) #32	C1orf159 (ENSCPRG00005001835) #33	ENSCPRG00005001852	AGRN (ENSCPRG00005002164) #35	HES4 (ENSCPRG00005002875) #37	ENSCPRG00005002884
Cryptodira	ANCESTRAL SPECIES	24	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00730000111452 #30	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35
Testudinoidea	ANCESTRAL SPECIES	20	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT01100000265027	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35
Emydidae	ANCESTRAL SPECIES	23	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000163056 #37
painted turtle	MODERN SPECIES	10	FNDC10 (ENSCPBG00000022929)	ENSCPBG00000022925 #7	TMEM240 (ENSCPBG00000022924) #8	ATAD3A (ENSCPBG00000022917) #9	VWA1 (ENSCPBG00000022913) #12	ENSCPBG00000022910	ANKRD65 (ENSCPBG00000022908) #14	MRPL20 (ENSCPBG00000022905) #15	CCNL2 (ENSCPBG00000022903) #16	ENSCPBG00000022900	AURKAIP1 (ENSCPBG00000022899) #17	MXRA8 (ENSCPBG00000022897) #18	DVL1 (ENSCPBG00000022891) #19	TAS1R3 (ENSCPBG00000022884) #20	CPTP (ENSCPBG00000022882) #21	INTS11 (ENSCPBG00000022634) #22	ENSCPBG00000022623	PUSL1 (ENSCPBG00000022621) #23	ACAP3 (ENSCPBG00000022283) #24	SCNN1D (ENSCPBG00000022230) #25	UBE2J2 (ENSCPBG00000022224) #26	C1QTNF12 (ENSCPBG00000022220) #27	B3GALT6 (ENSCPBG00000022218) #28	SDF4 (ENSCPBG00000022216) #29	ENSCPBG00000022213	TTLL10 (ENSCPBG00000022203) #32	C1orf159 (ENSCPBG00000022182) #33	RNF223 (ENSCPBG00000022170) #34	ENSCPBG00000022160	AGRN (ENSCPBG00000022148) #35	HES4 (ENSCPBG00000022140) #37
Three-toed box turtle	MODERN SPECIES	345	ENSTMTG00000022638	FNDC10 (ENSTMTG00000022639)	ENSTMTG00000022641 #7	TMEM240 (ENSTMTG00000022643) #8	ATAD3A (ENSTMTG00000022646) #9	VWA1 (ENSTMTG00000022652) #12	ENSTMTG00000022654	ANKRD65 (ENSTMTG00000022659) #14	MRPL20 (ENSTMTG00000022660) #15	CCNL2 (ENSTMTG00000022662) #16	AURKAIP1 (ENSTMTG00000022666) #17	MXRA8 (ENSTMTG00000022667) #18	DVL1 (ENSTMTG00000022672) #19	TAS1R3 (ENSTMTG00000022676) #20	CPTP (ENSTMTG00000022678) #21	INTS11 (ENSTMTG00000022679) #22	ENSTMTG00000022684	PUSL1 (ENSTMTG00000022687) #23	ACAP3 (ENSTMTG00000022693) #24	SCNN1D (ENSTMTG00000022704) #25	UBE2J2 (ENSTMTG00000022719) #26	C1QTNF12 (ENSTMTG00000022722) #27	B3GALT6 (ENSTMTG00000022728) #28	SDF4 (ENSTMTG00000022730) #29	TTLL10 (ENSTMTG00000022733) #32	C1orf159 (ENSTMTG00000022744) #33	RNF223 (ENSTMTG00000022749) #34	ENSTMTG00000022755	AGRN (ENSTMTG00000022768) #35	ENSTMTG00000022774	HES4 (ENSTMTG00000022777) #37
Testudinidae	ANCESTRAL SPECIES	22	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000163707 #14	ENSGT00390000015823 #15	ENSGT00940000159239.c #16	ENSGT00940000165046	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000160679 #20	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT01010000222360.B #29	ENSGT01100000265027	ENSGT00940000166589	ENSGT00940000160919 #32	ENSGT00390000009794 #33	ENSGT00940000163259 #34	ENSGT00940000153876.A	ENSGT00940000158337 #35	ENSGT00940000163056 #37
Abingdon island giant tortoise	MODERN SPECIES	708	TMEM240 (ENSCABG00000000573) #8	ATAD3A (ENSCABG00000000564) #9	VWA1 (ENSCABG00000000556) #12	ENSCABG00000000549	ANKRD65 (ENSCABG00000000540) #14	MRPL20 (ENSCABG00000000523) #15	ENSCABG00000000516 #16	ENSCABG00000000510 #16	ENSCABG00000000502	AURKAIP1 (ENSCABG00000000496) #17	MXRA8 (ENSCABG00000000483) #18	DVL1 (ENSCABG00000000176) #19	TAS1R3 (ENSCABG00000000137) #20	CPTP (ENSCABG00000000123) #21	ENSCABG00000000119	INTS11 (ENSCABG00000000098) #22	PUSL1 (ENSCABG00000000046) #23	ACAP3 (ENSCABG00000000037) #24	ENSCABG00000000017 #25	UBE2J2 (ENSCABG00000000011) #26	C1QTNF12 (ENSCABG00000022068) #27	SDF4 (ENSCABG00000022066) #29	ENSCABG00000022064 #32	C1orf159 (ENSCABG00000022060) #33	RNF223 (ENSCABG00000022059) #34	ENSCABG00000022056	AGRN (ENSCABG00000022055) #35	HES4 (ENSCABG00000022054) #37	ENSCABG00000022053	PLEKHN1 (ENSCABG00000022052)	KLHL17 (ENSCABG00000022051)
Goode s thornscrub tortoise	MODERN SPECIES	9	FNDC10 (ENSGEVG00005014924)	ENSGEVG00005014899 #7	TMEM240 (ENSGEVG00005014856) #8	ATAD3A (ENSGEVG00005014743) #9	VWA1 (ENSGEVG00005014520) #12	ENSGEVG00005014456	ANKRD65 (ENSGEVG00005014406) #14	MRPL20 (ENSGEVG00005014373) #15	CCNL2 (ENSGEVG00005014330) #16	ENSGEVG00005014274	AURKAIP1 (ENSGEVG00005014255) #17	MXRA8 (ENSGEVG00005014188) #18	DVL1 (ENSGEVG00005014137) #19	TAS1R3 (ENSGEVG00005014058) #20	CPTP (ENSGEVG00005014036) #21	INTS11 (ENSGEVG00005013979) #22	ENSGEVG00005013960	PUSL1 (ENSGEVG00005013943) #23	ACAP3 (ENSGEVG00005013733) #24	SCNN1D (ENSGEVG00005013380) #25	UBE2J2 (ENSGEVG00005013320) #26	C1QTNF12 (ENSGEVG00005013293) #27	SDF4 (ENSGEVG00005013176) #29	ENSGEVG00005013155	ENSGEVG00005013134	C1orf159 (ENSGEVG00005013086) #33	RNF223 (ENSGEVG00005013055) #34	ENSGEVG00005012962	AGRN (ENSGEVG00005012613) #35	HES4 (ENSGEVG00005012575) #37	ENSGEVG00005012545
Chinese turtle	MODERN SPECIES	1346												MXRA8 (ENSPSIG00000003025) #18	DVL1 (ENSPSIG00000002983) #19	TAS1R3 (ENSPSIG00000002953) #20	CPTP (ENSPSIG00000002947) #21	INTS11 (ENSPSIG00000002824) #22	ENSPSIG00000002818	PUSL1 (ENSPSIG00000002781) #23	ACAP3 (ENSPSIG00000002660) #24	ENSPSIG00000002657 #25	UBE2J2 (ENSPSIG00000002636) #26	C1QTNF12 (ENSPSIG00000002605) #27	B3GALT6 (ENSPSIG00000000883) #28	SDF4 (ENSPSIG00000002591) #29	TNFRSF4 (ENSPSIG00000002559) #30	ENSPSIG00000002481	ENSPSIG00000002476	ENSPSIG00000002463	TTLL10 (ENSPSIG00000002409) #32	C1orf159 (ENSPSIG00000002393) #33	RNF223 (ENSPSIG00000000876) #34
Anura	ANCESTRAL SPECIES	14	ENSGT00650000093633.a.a	ENSGT00940000164637	ENSGT00550000076432	ENSGT00390000010165 #7	ENSGT00400000023987 #8	ENSGT00730000111059 #9	ENSGT00940000160734 #12	ENSGT00940000163776.b	ENSGT00940000169328.a.b	ENSGT00390000015823 #15	ENSGT00940000159239 #16	ENSGT00390000012802 #17	ENSGT00390000001509 #18	ENSGT00950000182903.b.a #19	ENSGT00940000161763 #21	ENSGT00940000157644 #22	ENSGT01100000263537.b.a.a.a.b	ENSGT00950000183160.C #23	ENSGT00940000156199.b #24	ENSGT00940000168348	ENSGT00940000162685 #25	ENSGT00940000156173 #26	ENSGT00940000160300 #27	ENSGT00940000162229 #28	ENSGT01010000222360.B #29	ENSGT01100000265027	ENSGT00940000158035	ENSGT00940000158895.b	ENSGT00930000151052	ENSGT00940000159654	ENSGT00940000153675.a.a.a.b
Frog	MODERN SPECIES	7	fndc10 (ENSXETG00000049203)	ssu72 (ENSXETG00000012963) #7	tmem240 (ENSXETG00000030896) #8	atad3a (ENSXETG00000012959) #9	vwa1 (ENSXETG00000012958) #12	ENSXETG00000045705	tmem88 (ENSXETG00000036319)	ankrd65 (ENSXETG00000034757)	mrpl20 (ENSXETG00000011118) #15	ccnl2 (ENSXETG00000017379) #16	aurkaip1 (ENSXETG00000038755) #17	mxra8 (ENSXETG00000011119) #18	ENSXETG00000043776	dvl1 (ENSXETG00000011120) #19	cptp (ENSXETG00000011136) #21	ints11 (ENSXETG00000030716) #22	XB5721641 [provisional:lpar6] (ENSXETG00000011125)	sgf29 (ENSXETG00000011145) #23	acap3 (ENSXETG00000001021) #24	ENSXETG00000001030 #25	pla2g2e (ENSXETG00000025326)	scnn1d (ENSXETG00000001026) #25	ube2j2 (ENSXETG00000036215) #26	c1qtnf12 (ENSXETG00000001035) #27	b3galt6 (ENSXETG00000045861) #28	sdf4 (ENSXETG00000001037) #29	ENSXETG00000036024	ENSXETG00000001040	znf177 (ENSXETG00000040989)	ENSXETG00000030249	ENSXETG00000001042
Leishan spiny toad	MODERN SPECIES	2	ENSLLEG00000018858	FNDC10 (ENSLLEG00000018903)	ENSLLEG00000018962 #7	TMEM240 (ENSLLEG00000019116) #8	ATAD3A (ENSLLEG00000019177) #9	ENSLLEG00000019575 #12	ENSLLEG00000020190	ENSLLEG00000020211	ENSLLEG00000020261	CCNL2 (ENSLLEG00000020473) #16	ENSLLEG00000020822	AURKAIP1 (ENSLLEG00000020834) #17	MXRA8 (ENSLLEG00000020886) #18	DVL1 (ENSLLEG00000021088) #19	CPTP (ENSLLEG00000021469) #21	INTS11 (ENSLLEG00000021622) #22	ENSLLEG00000022682	PUSL1 (ENSLLEG00000022718) #23	ACAP3 (ENSLLEG00000022896) #24	ENSLLEG00000008686	ENSLLEG00000008762	SCNN1D (ENSLLEG00000008796) #25	UBE2J2 (ENSLLEG00000008935) #26	C1QTNF12 (ENSLLEG00000009085) #27	ENSLLEG00000009243	ENSLLEG00000009269	ENSLLEG00000009290	B3GALT6 (ENSLLEG00000009314) #28	SDF4 (ENSLLEG00000009357) #29	ENSLLEG00000009440	ENSLLEG00000009503
Coelacanth	MODERN SPECIES	223	ENSLACG00000018960	TTC34 (ENSLACG00000018948)	MMEL1 (ENSLACG00000018939)	prxl2b (ENSLACG00000018935)	ENSLACG00000018927	ENSLACG00000018925	ENSLACG00000018919	CCNL2 (ENSLACG00000018904) #16	AURKAIP1 (ENSLACG00000018895) #17	MXRA8 (ENSLACG00000018878) #18	DVL1 (ENSLACG00000018822) #19	ENSLACG00000018818 #20	ENSLACG00000018816	ENSLACG00000018812	cptp (ENSLACG00000018809)	INTS11 (ENSLACG00000018802) #22	ENSLACG00000018801	PUSL1 (ENSLACG00000018795) #23	ACAP3 (ENSLACG00000018750) #24	ENSLACG00000018745	SCNN1D (ENSLACG00000018741) #25	UBE2J2 (ENSLACG00000018733) #26	C1QTNF12 (ENSLACG00000018709) #27	B3GALT6 (ENSLACG00000018659) #28	SDF4 (ENSLACG00000018640) #29	ENSLACG00000022319	TTLL10 (ENSLACG00000018573) #32	ENSLACG00000018565	C1orf159 (ENSLACG00000022665) #33	RNF223 (ENSLACG00000018466) #34	ptpn11b (ENSLACG00000018414)