Sarcopterygii	ANCESTRAL SPECIES	8														ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.b ##27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Tetrapoda	ANCESTRAL SPECIES	5	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00720000108868	ENSGT00940000157503	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36	ENSGT01040000241896
Amniota	ANCESTRAL SPECIES	5	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00720000108868	ENSGT00940000157503	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00940000155657	ENSGT00390000015154	ENSGT00940000158528	ENSGT00940000153629.a.b	ENSGT01030000234637.b.c	ENSGT00940000159855	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36	ENSGT00400000023684
Mammalia	ANCESTRAL SPECIES	36	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000153661	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Theria	ANCESTRAL SPECIES		ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00940000153661.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Eutheria	ANCESTRAL SPECIES	1	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Primates	ANCESTRAL SPECIES	12	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Strepsirrhini	ANCESTRAL SPECIES	9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Lemuriformes	ANCESTRAL SPECIES	4	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212.bb #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Lemuriformes_a	ANCESTRAL SPECIES	103	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212.bb #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Coquerels sifaka	MODERN SPECIES	544	ENSPCOG00000013869 #7	CADPS2 (ENSPCOG00000028725) #8	ENSPCOG00000007052 #9	FEZF1 (ENSPCOG00000021658) #10	AASS (ENSPCOG00000027625) #11	PTPRZ1 (ENSPCOG00000025981) #12	ENSPCOG00000025054 #13	FAM3C (ENSPCOG00000019661) #14	WNT16 (ENSPCOG00000015467) #15	CPED1 (ENSPCOG00000016564) #16	ENSPCOG00000028787 #17	TSPAN12 (ENSPCOG00000021720) #18	KCND2 (ENSPCOG00000015891) #19	ENSPCOG00000017095 #20	ENSPCOG00000003309 #21	CTTNBP2 (ENSPCOG00000000372) #22	CFTR (ENSPCOG00000014929) #23	ASZ1 (ENSPCOG00000018076) #24	WNT2 (ENSPCOG00000027908) #25	ST7 (ENSPCOG00000008893) #26	CAPZA2 (ENSPCOG00000021478) #27	MET (ENSPCOG00000022991) #28	CAV1 (ENSPCOG00000024742) #29	CAV2 (ENSPCOG00000025837) #30	TES (ENSPCOG00000009261) #31	ENSPCOG00000014908 #32	TFEC (ENSPCOG00000026787) #33	MDFIC (ENSPCOG00000002097) #34	FOXP2 (ENSPCOG00000027439) #35	PPP1R3A (ENSPCOG00000020348) #36	ENSPCOG00000021117 #37
Greater bamboo lemur	MODERN SPECIES	654	SLC13A1 (ENSPSMG00000013858) #7	TAS2R16 (ENSPSMG00000013871)	CADPS2 (ENSPSMG00000014152) #8	FEZF1 (ENSPSMG00000014374) #10	AASS (ENSPSMG00000014416) #11	PTPRZ1 (ENSPSMG00000014542) #12	FAM3C (ENSPSMG00000014578) #14	WNT16 (ENSPSMG00000014604) #15	CPED1 (ENSPSMG00000014697) #16	ING3 (ENSPSMG00000014755)	TSPAN12 (ENSPSMG00000014789) #18	KCND2 (ENSPSMG00000014803) #19	ENSPSMG00000014820 #20	ENSPSMG00000014837	ENSPSMG00000014842 #21	CTTNBP2 (ENSPSMG00000014929) #22	ENSPSMG00000014944	CFTR (ENSPSMG00000015055) #23	ASZ1 (ENSPSMG00000015104) #24	WNT2 (ENSPSMG00000015124) #25	ST7 (ENSPSMG00000015388) #26	CAPZA2 (ENSPSMG00000015591) #27	ENSPSMG00000015643
Mouse lemur	MODERN SPECIES	2	ENSMICG00000034262 #9	FEZF1 (ENSMICG00000033586) #10	AASS (ENSMICG00000000617) #11	PTPRZ1 (ENSMICG00000000608) #12	ENSMICG00000030043	ENSMICG00000026612	FAM3C (ENSMICG00000034347) #14	WNT16 (ENSMICG00000013963) #15	CPED1 (ENSMICG00000036835) #16	ENSMICG00000013934	TSPAN12 (ENSMICG00000000958) #18	KCND2 (ENSMICG00000043428) #19	ENSMICG00000048064	ENSMICG00000036567	LSM8 (ENSMICG00000042730) #21	CTTNBP2 (ENSMICG00000005787) #22	CFTR (ENSMICG00000046039) #23	ASZ1 (ENSMICG00000005752) #24	WNT2 (ENSMICG00000005749) #25	ST7 (ENSMICG00000005741) #26	CAPZA2 (ENSMICG00000032607) #27	MET (ENSMICG00000000697) #28	CAV1 (ENSMICG00000026847) #29	CAV2 (ENSMICG00000045272) #30	TES (ENSMICG00000007002) #31	TFEC (ENSMICG00000006995) #33	ENSMICG00000003662 #34	FOXP2 (ENSMICG00000003648) #35	PPP1R3A (ENSMICG00000046647) #36	SMIM30 (ENSMICG00000041783)	ENSMICG00000047258 #37
Bushbaby	MODERN SPECIES	152	RNF133 (ENSOGAG00000002671)	CADPS2 (ENSOGAG00000002665) #8	FEZF1 (ENSOGAG00000002663) #10	AASS (ENSOGAG00000016086) #11	PTPRZ1 (ENSOGAG00000016074) #12	FAM3C (ENSOGAG00000004219) #14	WNT16 (ENSOGAG00000004218) #15	CPED1 (ENSOGAG00000004213) #16	ING3 (ENSOGAG00000004212)	TSPAN12 (ENSOGAG00000004209) #18	KCND2 (ENSOGAG00000031295) #19	ENSOGAG00000027459	ENSOGAG00000025182	ENSOGAG00000006943	LSM8 (ENSOGAG00000013377) #21	CTTNBP2 (ENSOGAG00000001760) #22	CFTR (ENSOGAG00000001756) #23	ASZ1 (ENSOGAG00000003040) #24	WNT2 (ENSOGAG00000013574) #25	ST7 (ENSOGAG00000013563) #26	CAPZA2 (ENSOGAG00000012540) #27	MET (ENSOGAG00000003961) #28	CAV1 (ENSOGAG00000014265) #29	CAV2 (ENSOGAG00000025779) #30	TES (ENSOGAG00000010070) #31	TFEC (ENSOGAG00000010066) #33	MDFIC (ENSOGAG00000002835) #34	ENSOGAG00000027543	FOXP2 (ENSOGAG00000002833) #35	PPP1R3A (ENSOGAG00000005234) #36	SMIM30 (ENSOGAG00000029997)
Haplorrhini	ANCESTRAL SPECIES	8	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Simiiformes	ANCESTRAL SPECIES	12	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Hominidae	ANCESTRAL SPECIES	11	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	15	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Gorilla	MODERN SPECIES	20	SLC13A1 (ENSGGOG00000006358) #7	TAS2R16 (ENSGGOG00000010354)	ENSGGOG00000042593 #9	CADPS2 (ENSGGOG00000034978) #8	AASS (ENSGGOG00000027257) #11	PTPRZ1 (ENSGGOG00000023127) #12	FAM3C (ENSGGOG00000016446) #14	WNT16 (ENSGGOG00000016506) #15	CPED1 (ENSGGOG00000014223) #16	ING3 (ENSGGOG00000004349)	TSPAN12 (ENSGGOG00000034918) #18	KCND2 (ENSGGOG00000043715) #19	ENSGGOG00000039138 #20	ANKRD7 (ENSGGOG00000025444)	LSM8 (ENSGGOG00000041883) #21	CTTNBP2 (ENSGGOG00000014941) #22	CFTR (ENSGGOG00000004019) #23	ASZ1 (ENSGGOG00000002659) #24	WNT2 (ENSGGOG00000009721) #25	ST7 (ENSGGOG00000014410) #26	ENSGGOG00000027365	CAPZA2 (ENSGGOG00000012158) #27	MET (ENSGGOG00000012982) #28	CAV1 (ENSGGOG00000027870) #29	CAV2 (ENSGGOG00000015074) #30	TES (ENSGGOG00000016067) #31	TFEC (ENSGGOG00000009901) #33	ENSGGOG00000042671 #34	FOXP2 (ENSGGOG00000027435) #35	PPP1R3A (ENSGGOG00000005621) #36	SMIM30 (ENSGGOG00000003081)
Homo/Pan group	ANCESTRAL SPECIES	15	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Human	MODERN SPECIES	19	TAS2R16 (ENSG00000128519)	RNF148 (ENSG00000235631) #9	RNF133 (ENSG00000188050)	CADPS2 (ENSG00000081803) #8	FEZF1 (ENSG00000128610) #10	AASS (ENSG00000008311) #11	PTPRZ1 (ENSG00000106278) #12	FAM3C (ENSG00000196937) #14	WNT16 (ENSG00000002745) #15	CPED1 (ENSG00000106034) #16	ING3 (ENSG00000071243)	TSPAN12 (ENSG00000106025) #18	KCND2 (ENSG00000184408) #19	ANKRD7 (ENSG00000106013)	LSM8 (ENSG00000128534) #21	CTTNBP2 (ENSG00000077063) #22	ASZ1 (ENSG00000154438) #24	CFTR (ENSG00000001626) #23	WNT2 (ENSG00000105989) #25	ENSG00000288635	ST7 (ENSG00000004866) #26	CAPZA2 (ENSG00000198898) #27	MET (ENSG00000105976) #28	CAV1 (ENSG00000105974) #29	CAV2 (ENSG00000105971) #30	TES (ENSG00000135269) #31	TFEC (ENSG00000105967) #33	MDFIC (ENSG00000135272) #34	FOXP2 (ENSG00000128573) #35	PPP1R3A (ENSG00000154415) #36	SMIM30 (ENSG00000214194)
Pan	ANCESTRAL SPECIES	13	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT01100000263543.a.g.b.b.b.a.c.b.a	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00950000182802.A.a.a.e.b.b	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Chimpanzee	MODERN SPECIES	20	ENSPTRG00000044831	AASS (ENSPTRG00000023614) #11	PTPRZ1 (ENSPTRG00000019629) #12	ENSPTRG00000045463	ENSPTRG00000043912	FAM3C (ENSPTRG00000022727) #14	WNT16 (ENSPTRG00000019627) #15	ENSPTRG00000044943	CPED1 (ENSPTRG00000019626) #16	ING3 (ENSPTRG00000019625)	TSPAN12 (ENSPTRG00000019624) #18	KCND2 (ENSPTRG00000047469) #19	ENSPTRG00000050664 #20	ANKRD7 (ENSPTRG00000019622)	LSM8 (ENSPTRG00000046596) #21	CTTNBP2 (ENSPTRG00000019620) #22	CFTR (ENSPTRG00000019619) #23	ASZ1 (ENSPTRG00000019618) #24	WNT2 (ENSPTRG00000019617) #25	ST7 (ENSPTRG00000019616) #26	CAPZA2 (ENSPTRG00000019615) #27	MET (ENSPTRG00000019614) #28	CAV1 (ENSPTRG00000019613) #29	CAV2 (ENSPTRG00000040031) #30	TES (ENSPTRG00000023877) #31	TFEC (ENSPTRG00000047353) #33	MDFIC (ENSPTRG00000019609) #34	FOXP2 (ENSPTRG00000019608) #35	PPP1R3A (ENSPTRG00000019607) #36	SMIM30 (ENSPTRG00000051687)	ENSPTRG00000048811 #37
Bonobo	MODERN SPECIES	20	CADPS2 (ENSPPAG00000029988) #8	FEZF1 (ENSPPAG00000027222) #10	AASS (ENSPPAG00000041360) #11	PTPRZ1 (ENSPPAG00000042542) #12	ENSPPAG00000042900	FAM3C (ENSPPAG00000037694) #14	WNT16 (ENSPPAG00000028372) #15	ENSPPAG00000032331	CPED1 (ENSPPAG00000036887) #16	ING3 (ENSPPAG00000029024)	TSPAN12 (ENSPPAG00000033647) #18	KCND2 (ENSPPAG00000034678) #19	ENSPPAG00000026407 #20	ANKRD7 (ENSPPAG00000011992)	ENSPPAG00000043228 #21	CTTNBP2 (ENSPPAG00000032264) #22	CFTR (ENSPPAG00000040492) #23	ASZ1 (ENSPPAG00000041362) #24	WNT2 (ENSPPAG00000030407) #25	ST7 (ENSPPAG00000028019) #26	ENSPPAG00000042892	CAPZA2 (ENSPPAG00000043436) #27	MET (ENSPPAG00000038004) #28	CAV1 (ENSPPAG00000036739) #29	CAV2 (ENSPPAG00000042201) #30	TES (ENSPPAG00000034692) #31	ENSPPAG00000004955 #33	ENSPPAG00000027647 #34	FOXP2 (ENSPPAG00000030868) #35	PPP1R3A (ENSPPAG00000041499) #36	SMIM30 (ENSPPAG00000019976)
Orangutan	MODERN SPECIES	20	SLC13A1 (ENSPPYG00000017954) #7	TAS2R16 (ENSPPYG00000017953)	ENSPPYG00000038373 #9	CADPS2 (ENSPPYG00000017952) #8	FEZF1 (ENSPPYG00000017951) #10	AASS (ENSPPYG00000017950) #11	PTPRZ1 (ENSPPYG00000017949) #12	FAM3C (ENSPPYG00000017948) #14	WNT16 (ENSPPYG00000017947) #15	CPED1 (ENSPPYG00000017946) #16	ING3 (ENSPPYG00000017945)	TSPAN12 (ENSPPYG00000017944) #18	KCND2 (ENSPPYG00000017943) #19	ANKRD7 (ENSPPYG00000018274)	LSM8 (ENSPPYG00000033700) #21	CTTNBP2 (ENSPPYG00000017941) #22	CFTR (ENSPPYG00000017940) #23	ASZ1 (ENSPPYG00000017939) #24	WNT2 (ENSPPYG00000017938) #25	ST7 (ENSPPYG00000017934) #26	CAPZA2 (ENSPPYG00000017933) #27	MET (ENSPPYG00000017932) #28	CAV1 (ENSPPYG00000017931) #29	CAV2 (ENSPPYG00000017930) #30	TES (ENSPPYG00000017929) #31	TFEC (ENSPPYG00000031887) #33	ENSPPYG00000038658 #34	FOXP2 (ENSPPYG00000017926) #35	PPP1R3A (ENSPPYG00000040617) #36	SMIM30 (ENSPPYG00000017923)	GPR85 (ENSPPYG00000017922) #37
Gibbon	MODERN SPECIES	3	IQUB (ENSNLEG00000012115)	SLC13A1 (ENSNLEG00000012101) #7	ENSNLEG00000030675 #9	CADPS2 (ENSNLEG00000012024) #8	ENSNLEG00000012020 #10	AASS (ENSNLEG00000011978) #11	PTPRZ1 (ENSNLEG00000011934) #12	FAM3C (ENSNLEG00000011915) #14	WNT16 (ENSNLEG00000011905) #15	CPED1 (ENSNLEG00000011852) #16	ING3 (ENSNLEG00000033180)	TSPAN12 (ENSNLEG00000011786) #18	KCND2 (ENSNLEG00000035189) #19	ANKRD7 (ENSNLEG00000011773)	LSM8 (ENSNLEG00000011768) #21	CTTNBP2 (ENSNLEG00000011717) #22	CFTR (ENSNLEG00000011680) #23	ASZ1 (ENSNLEG00000011649) #24	WNT2 (ENSNLEG00000011635) #25	ENSNLEG00000036065	ST7 (ENSNLEG00000011617) #26	ENSNLEG00000032514	ENSNLEG00000011604 #27	MET (ENSNLEG00000011530) #28	CAV1 (ENSNLEG00000028023) #29	ENSNLEG00000011523 #30	TES (ENSNLEG00000011494) #31	TFEC (ENSNLEG00000011480) #33	ENSNLEG00000033212 #34	FOXP2 (ENSNLEG00000011394) #35	PPP1R3A (ENSNLEG00000011388) #36
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212.`b #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01010000223358	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212.`b #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Macaca	ANCESTRAL SPECIES	3	ENSGT00940000163382 #9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01010000223358	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212.`b #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37
Macaca_a	ANCESTRAL SPECIES	7	ENSGT01030000234550.a.a.d.a.a #7	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000164704	ENSGT00730000111212.`b #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Crab-eating macaque	MODERN SPECIES	13	TAS2R16 (ENSMFAG00000064959)	ENSMFAG00000041426 #9	CADPS2 (ENSMFAG00000040292) #8	FEZF1 (ENSMFAG00000034053) #10	AASS (ENSMFAG00000038411) #11	PTPRZ1 (ENSMFAG00000032576) #12	FAM3C (ENSMFAG00000043181) #14	WNT16 (ENSMFAG00000031359) #15	CPED1 (ENSMFAG00000031588) #16	ING3 (ENSMFAG00000044425)	TSPAN12 (ENSMFAG00000002377) #18	KCND2 (ENSMFAG00000046158) #19	ANKRD7 (ENSMFAG00000039109)	LSM8 (ENSMFAG00000047892) #21	ENSMFAG00000056701	CTTNBP2 (ENSMFAG00000039255) #22	ENSMFAG00000053020	CFTR (ENSMFAG00000000170) #23	ASZ1 (ENSMFAG00000033937) #24	WNT2 (ENSMFAG00000044147) #25	ST7 (ENSMFAG00000008568) #26	CAPZA2 (ENSMFAG00000041237) #27	MET (ENSMFAG00000028602) #28	CAV1 (ENSMFAG00000046330) #29	CAV2 (ENSMFAG00000048330) #30	ENSMFAG00000064881	TES (ENSMFAG00000005909) #31	TFEC (ENSMFAG00000035684) #33	MDFIC (ENSMFAG00000050895) #34	FOXP2 (ENSMFAG00000000636) #35	ENSMFAG00000057626
Rhesus	MODERN SPECIES	13	SLC13A1 (ENSMMUG00000016770) #7	TAS2R16 (ENSMMUG00000064934)	CADPS2 (ENSMMUG00000021543) #8	FEZF1 (ENSMMUG00000021542) #10	AASS (ENSMMUG00000044304) #11	PTPRZ1 (ENSMMUG00000012418) #12	FAM3C (ENSMMUG00000002440) #14	WNT16 (ENSMMUG00000002439) #15	CPED1 (ENSMMUG00000002435) #16	ING3 (ENSMMUG00000002434)	TSPAN12 (ENSMMUG00000023310) #18	KCND2 (ENSMMUG00000023308) #19	ENSMMUG00000052979	ANKRD7 (ENSMMUG00000050524)	LSM8 (ENSMMUG00000060460) #21	CTTNBP2 (ENSMMUG00000010297) #22	ENSMMUG00000060895	CFTR (ENSMMUG00000011269) #23	ASZ1 (ENSMMUG00000021726) #24	ENSMMUG00000064285	WNT2 (ENSMMUG00000055123) #25	ST7 (ENSMMUG00000021722) #26	ENSMMUG00000052234	CAPZA2 (ENSMMUG00000006784) #27	MET (ENSMMUG00000006779) #28	CAV1 (ENSMMUG00000014122) #29	CAV2 (ENSMMUG00000061706) #30	TES (ENSMMUG00000007097) #31	TFEC (ENSMMUG00000038489) #33	MDFIC (ENSMMUG00000019776) #34	ENSMMUG00000049886
Pig-tailed macaque	MODERN SPECIES	95	CADPS2 (ENSMNEG00000009908) #8	ENSMNEG00000037281 #9	FEZF1 (ENSMNEG00000017416) #10	AASS (ENSMNEG00000031610) #11	PTPRZ1 (ENSMNEG00000038637) #12	FAM3C (ENSMNEG00000006860) #14	WNT16 (ENSMNEG00000037874) #15	CPED1 (ENSMNEG00000037782) #16	ING3 (ENSMNEG00000038183)	TSPAN12 (ENSMNEG00000034729) #18	KCND2 (ENSMNEG00000001242) #19	ENSMNEG00000038870	ENSMNEG00000007384 #20	ANKRD7 (ENSMNEG00000029642)	ENSMNEG00000036764 #21	CTTNBP2 (ENSMNEG00000039935) #22	CFTR (ENSMNEG00000042569) #23	ASZ1 (ENSMNEG00000042319) #24	WNT2 (ENSMNEG00000035850) #25	ST7 (ENSMNEG00000043047) #26	ENSMNEG00000042576	CAPZA2 (ENSMNEG00000044342) #27	MET (ENSMNEG00000038573) #28	CAV1 (ENSMNEG00000044995) #29	CAV2 (ENSMNEG00000042279) #30	TES (ENSMNEG00000039367) #31	ENSMNEG00000038687	ENSMNEG00000021473	TFEC (ENSMNEG00000000097) #33	MDFIC (ENSMNEG00000045431) #34	FOXP2 (ENSMNEG00000034461) #35
Cercopithecinae_b	ANCESTRAL SPECIES	11	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01010000223358	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212.`b #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Cercopithecinae_d	ANCESTRAL SPECIES	24	ENSGT00940000163382 #9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01010000223358	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212.`b #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT01030000234542.b.a.a.a.b.a.a.a.a	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Sooty mangabey	MODERN SPECIES	283	ENSCATG00000041130 #9	CADPS2 (ENSCATG00000017941) #8	FEZF1 (ENSCATG00000037503) #10	AASS (ENSCATG00000024168) #11	PTPRZ1 (ENSCATG00000042812) #12	FAM3C (ENSCATG00000033663) #14	WNT16 (ENSCATG00000042098) #15	CPED1 (ENSCATG00000034268) #16	ING3 (ENSCATG00000037947)	TSPAN12 (ENSCATG00000032384) #18	ENSCATG00000013909	KCND2 (ENSCATG00000034255) #19	ENSCATG00000014280 #20	ANKRD7 (ENSCATG00000005822)	LSM8 (ENSCATG00000045302) #21	CTTNBP2 (ENSCATG00000043370) #22	CFTR (ENSCATG00000045275) #23	ASZ1 (ENSCATG00000034312) #24	WNT2 (ENSCATG00000040118) #25	ENSCATG00000034007	ST7 (ENSCATG00000044990) #26	CAPZA2 (ENSCATG00000040117) #27	MET (ENSCATG00000043244) #28	CAV1 (ENSCATG00000030906) #29	CAV2 (ENSCATG00000031761) #30	TES (ENSCATG00000018148) #31	TFEC (ENSCATG00000035757) #33	MDFIC (ENSCATG00000005944) #34	FOXP2 (ENSCATG00000043286) #35	ENSCATG00000039945	IRS4 (ENSCATG00000036461)
Drill	MODERN SPECIES	288																CTTNBP2 (ENSMLEG00000033419) #22	CFTR (ENSMLEG00000041547) #23
Olive baboon	MODERN SPECIES	14	AASS (ENSPANG00000015986) #11	PTPRZ1 (ENSPANG00000019044) #12	ENSPANG00000040908	ENSPANG00000045443	ENSPANG00000038082	ENSPANG00000044216	FAM3C (ENSPANG00000006062) #14	WNT16 (ENSPANG00000025364) #15	CPED1 (ENSPANG00000016466) #16	ING3 (ENSPANG00000018195)	TSPAN12 (ENSPANG00000032965) #18	KCND2 (ENSPANG00000032534) #19	ENSPANG00000045599	ANKRD7 (ENSPANG00000016259)	ENSPANG00000039754 #21	CTTNBP2 (ENSPANG00000007108) #22	CFTR (ENSPANG00000015987) #23	ASZ1 (ENSPANG00000016260) #24	WNT2 (ENSPANG00000048086) #25	ST7 (ENSPANG00000020407) #26	CAPZA2 (ENSPANG00000024714) #27	MET (ENSPANG00000024383) #28	CAV1 (ENSPANG00000015174) #29	CAV2 (ENSPANG00000045499) #30	TES (ENSPANG00000008934) #31	TFEC (ENSPANG00000022367) #33	MDFIC (ENSPANG00000015175) #34	FOXP2 (ENSPANG00000024715) #35	PPP1R3A (ENSPANG00000017583) #36	SMIM30 (ENSPANG00000031865)	GPR85 (ENSPANG00000038655) #37
Vervet Monkey	MODERN SPECIES	13	TAS2R16 (ENSCSAG00000019134)	RNF148 (ENSCSAG00000019133) #9	RNF133 (ENSCSAG00000019132)	CADPS2 (ENSCSAG00000010492) #8	FEZF1 (ENSCSAG00000010570) #10	AASS (ENSCSAG00000010587) #11	PTPRZ1 (ENSCSAG00000010610) #12	FAM3C (ENSCSAG00000010624) #14	WNT16 (ENSCSAG00000010637) #15	CPED1 (ENSCSAG00000010728) #16	ING3 (ENSCSAG00000010764)	TSPAN12 (ENSCSAG00000010773) #18	KCND2 (ENSCSAG00000010780) #19	ANKRD7 (ENSCSAG00000010796)	ENSCSAG00000010802 #21	CTTNBP2 (ENSCSAG00000010811) #22	ENSCSAG00000010820 #23	ASZ1 (ENSCSAG00000010871) #24	WNT2 (ENSCSAG00000010887) #25	ENSCSAG00000010890	ST7 (ENSCSAG00000010897) #26	CAPZA2 (ENSCSAG00000010902) #27	MET (ENSCSAG00000010912) #28	CAV1 (ENSCSAG00000010920) #29	CAV2 (ENSCSAG00000010925) #30	TES (ENSCSAG00000010935) #31	TFEC (ENSCSAG00000010942) #33	MDFIC (ENSCSAG00000010952) #34	FOXP2 (ENSCSAG00000011057) #35	PPP1R3A (ENSCSAG00000011088) #36	SMIM30 (ENSCSAG00000011096)
Rhinopithecus	ANCESTRAL SPECIES	328														ENSGT00940000164704	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00910000147739	ENSGT00950000183119.a.e.b.n.a #27	ENSGT00940000158022 #28	ENSGT00940000155264.m.b.a	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35
Golden snub-nosed monkey	MODERN SPECIES	2727														ANKRD7 (ENSRROG00000029970)	LSM8 (ENSRROG00000039618) #21	CTTNBP2 (ENSRROG00000040541) #22	CFTR (ENSRROG00000026792) #23	ASZ1 (ENSRROG00000041719) #24	WNT2 (ENSRROG00000016067) #25	ST7 (ENSRROG00000037257) #26	CAPZA2 (ENSRROG00000005766) #27	ENSRROG00000039690	MET (ENSRROG00000042487) #28	ENSRROG00000011599	CAV1 (ENSRROG00000035906) #29	CAV2 (ENSRROG00000034834) #30
Black snub-nosed monkey	MODERN SPECIES	209														ANKRD7 (ENSRBIG00000030492)	LSM8 (ENSRBIG00000032851) #21	CTTNBP2 (ENSRBIG00000028759) #22	CFTR (ENSRBIG00000037824) #23	ASZ1 (ENSRBIG00000026606) #24	WNT2 (ENSRBIG00000044176) #25	ST7 (ENSRBIG00000035138) #26	ENSRBIG00000034828	CAPZA2 (ENSRBIG00000043946) #27	CLIP2 (ENSRBIG00000029416)	RFC2 (ENSRBIG00000034145)	LAT2 (ENSRBIG00000037481)	EIF4H (ENSRBIG00000014939)	LIMK1 (ENSRBIG00000028914)	ELN (ENSRBIG00000041564)	TMEM270 (ENSRBIG00000036134)	ENSRBIG00000032733	CLDN4 (ENSRBIG00000006530)
Platyrrhini	ANCESTRAL SPECIES	10	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Cebidae	ANCESTRAL SPECIES	9	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Marmoset	MODERN SPECIES	20	LMBR1 (ENSCJAG00000004344)	ENSCJAG00000079983	ENSCJAG00000004336	ENSCJAG00000078997	UBE3C (ENSCJAG00000004298)	ENSCJAG00000085556	DNAJB6 (ENSCJAG00000005288)	PTPRN2 (ENSCJAG00000005320)	NCAPG2 (ENSCJAG00000015156)	ESYT2 (ENSCJAG00000014123)	DYNC2I1 (ENSCJAG00000014109)	VIPR2 (ENSCJAG00000014084)	ANKRD7 (ENSCJAG00000004788)	ENSCJAG00000064536	LSM8 (ENSCJAG00000077574) #21	CTTNBP2 (ENSCJAG00000004816) #22	CFTR (ENSCJAG00000004895) #23	ENSCJAG00000074557	ASZ1 (ENSCJAG00000004944) #24	WNT2 (ENSCJAG00000004983) #25	ENSCJAG00000086472	ST7 (ENSCJAG00000004988) #26	CAPZA2 (ENSCJAG00000005079) #27	MET (ENSCJAG00000005145) #28	CAV1 (ENSCJAG00000063550) #29	CAV2 (ENSCJAG00000054908) #30	ENSCJAG00000079520	TES (ENSCJAG00000005193) #31	TFEC (ENSCJAG00000047848) #33	ENSCJAG00000053054	ENSCJAG00000080412
Cebidae_a	ANCESTRAL SPECIES	7	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000164704	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Bolivian squirrel monkey	MODERN SPECIES	44	CADPS2 (ENSSBOG00000027008) #8	ENSSBOG00000030358 #9	FEZF1 (ENSSBOG00000024490) #10	AASS (ENSSBOG00000023976) #11	PTPRZ1 (ENSSBOG00000031204) #12	ENSSBOG00000023808	FAM3C (ENSSBOG00000035343) #14	WNT16 (ENSSBOG00000028903) #15	CPED1 (ENSSBOG00000030761) #16	ING3 (ENSSBOG00000032892)	TSPAN12 (ENSSBOG00000018467) #18	KCND2 (ENSSBOG00000020186) #19	ENSSBOG00000018270 #20	ANKRD7 (ENSSBOG00000021785)	LSM8 (ENSSBOG00000023223) #21	CTTNBP2 (ENSSBOG00000032674) #22	CFTR (ENSSBOG00000034493) #23	ASZ1 (ENSSBOG00000014420) #24	WNT2 (ENSSBOG00000026115) #25	ST7 (ENSSBOG00000031136) #26	CAPZA2 (ENSSBOG00000026180) #27	ENSSBOG00000033214	MET (ENSSBOG00000018494) #28	CAV1 (ENSSBOG00000029819) #29	CAV2 (ENSSBOG00000023114) #30	TES (ENSSBOG00000031613) #31	TFEC (ENSSBOG00000024242) #33	MDFIC (ENSSBOG00000032800) #34	FOXP2 (ENSSBOG00000029085) #35	PPP1R3A (ENSSBOG00000031325) #36	SMIM30 (ENSSBOG00000007409)
Capuchin	MODERN SPECIES	90														ANKRD7 (ENSCCAG00000028943)	LSM8 (ENSCCAG00000021329) #21	CTTNBP2 (ENSCCAG00000021725) #22	CFTR (ENSCCAG00000026860) #23	ASZ1 (ENSCCAG00000028858) #24	WNT2 (ENSCCAG00000031998) #25	ST7 (ENSCCAG00000022641) #26	CAPZA2 (ENSCCAG00000030246) #27	MET (ENSCCAG00000031166) #28	CAV1 (ENSCCAG00000031872) #29	CAV2 (ENSCCAG00000023447) #30	TES (ENSCCAG00000036382) #31	TFEC (ENSCCAG00000022469) #33	MDFIC (ENSCCAG00000022551) #34	FOXP2 (ENSCCAG00000003699) #35	PPP1R3A (ENSCCAG00000033016) #36	SMIM30 (ENSCCAG00000007418)	ENSCCAG00000027586 #37
Mas night monkey	MODERN SPECIES	298														ANKRD7 (ENSANAG00000027505)	LSM8 (ENSANAG00000027771) #21	CTTNBP2 (ENSANAG00000035530) #22	CFTR (ENSANAG00000018699) #23
Tarsier	MODERN SPECIES	5091																CTTNBP2 (ENSTSYG00000001459) #22	CFTR (ENSTSYG00000000797) #23	ASZ1 (ENSTSYG00000014502) #24	WNT2 (ENSTSYG00000007418) #25	ST7 (ENSTSYG00000006035) #26	CAPZA2 (ENSTSYG00000006037) #27
Euarchontoglires_A	ANCESTRAL SPECIES	17	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Glires	ANCESTRAL SPECIES	18	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Rodentia	ANCESTRAL SPECIES	12	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Rodentia_B	ANCESTRAL SPECIES	9	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Myomorpha	ANCESTRAL SPECIES	8	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Muroidea	ANCESTRAL SPECIES	8	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Cricetidae	ANCESTRAL SPECIES	3	ENSGT01030000234550.a.a.d.a.a #7	ENSGT01100000263477.B.d.b	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT01030000234550.a.a.d.a.a #7	ENSGT01100000263477.B.d.b	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Northern American deer mouse	MODERN SPECIES	16	Fezf1 (ENSPEMG00000010541) #10	Aass (ENSPEMG00000008591) #11	Ptprz1 (ENSPEMG00000014955) #12	ENSPEMG00000022248 #14	Wnt16 (ENSPEMG00000024607) #15	Cped1 (ENSPEMG00000024278) #16	Ing3 (ENSPEMG00000021561)	Tspan12 (ENSPEMG00000016235) #18	Kcnd2 (ENSPEMG00000012871) #19	ENSPEMG00000027299	ENSPEMG00000025522	ENSPEMG00000025502	ENSPEMG00000026145	Ankrd7 (ENSPEMG00000015569)	Lsm8 (ENSPEMG00000009153) #21	Cttnbp2 (ENSPEMG00000006365) #22	Cftr (ENSPEMG00000008730) #23	Asz1 (ENSPEMG00000005011) #24	Wnt2 (ENSPEMG00000024059) #25	St7 (ENSPEMG00000006510) #26	Capza2 (ENSPEMG00000023836) #27	Met (ENSPEMG00000021204) #28	Cav1 (ENSPEMG00000024904) #29	Cav2 (ENSPEMG00000024329) #30	ENSPEMG00000011977	ENSPEMG00000002837 #31	Tfec (ENSPEMG00000016053) #33	Mdfic (ENSPEMG00000000955) #34	Foxp2 (ENSPEMG00000017097) #35	Ppp1r3a (ENSPEMG00000011327) #36	Smim30 (ENSPEMG00000015135)
Prairie vole	MODERN SPECIES	350	Frmd7 (ENSMOCG00000017123)	Rap2c (ENSMOCG00000007198)	Mbnl3 (ENSMOCG00000011470)	Hs6st2 (ENSMOCG00000014810)	Usp26 (ENSMOCG00000011350)	Aass (ENSMOCG00000015947) #11	Ptprz1 (ENSMOCG00000007634) #12	Fam3c (ENSMOCG00000005307) #14	Wnt16 (ENSMOCG00000021643) #15	Cped1 (ENSMOCG00000013716) #16	Ing3 (ENSMOCG00000015011)	Tspan12 (ENSMOCG00000018964) #18	Kcnd2 (ENSMOCG00000022409) #19	Lsm8 (ENSMOCG00000001688) #21	ENSMOCG00000018450	Cttnbp2 (ENSMOCG00000010478) #22	Cftr (ENSMOCG00000007371) #23	Asz1 (ENSMOCG00000001767) #24	Wnt2 (ENSMOCG00000022808) #25	St7 (ENSMOCG00000016312) #26	Capza2 (ENSMOCG00000017352) #27	Met (ENSMOCG00000006344) #28	Cav1 (ENSMOCG00000019224) #29	Cav2 (ENSMOCG00000015582) #30	ENSMOCG00000011236 #31	Tfec (ENSMOCG00000021582) #33	ENSMOCG00000002194	ENSMOCG00000018404	Mdfic (ENSMOCG00000014159) #34	Foxp2 (ENSMOCG00000018674) #35	Ppp1r3a (ENSMOCG00000007450) #36
Cricetinae	ANCESTRAL SPECIES	23	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Chinese hamster chok1gshd	MODERN SPECIES	54	Rnf133 (ENSCGRG00001011407)	Cadps2 (ENSCGRG00001009309) #8	Fezf1 (ENSCGRG00001018145) #10	Aass (ENSCGRG00001014114) #11	Ptprz1 (ENSCGRG00001020740) #12	Fam3c (ENSCGRG00001019403) #14	Wnt16 (ENSCGRG00001022981) #15	Cped1 (ENSCGRG00001009705) #16	Ing3 (ENSCGRG00001012381)	Tspan12 (ENSCGRG00001012145) #18	Kcnd2 (ENSCGRG00001013210) #19	ENSCGRG00001021329	ENSCGRG00001021813	Ankrd7 (ENSCGRG00001022051)	Lsm8 (ENSCGRG00001000450) #21	Cttnbp2 (ENSCGRG00001010648) #22	Cftr (ENSCGRG00001006106) #23	Asz1 (ENSCGRG00001020481) #24	Wnt2 (ENSCGRG00001005484) #25	St7 (ENSCGRG00001018752) #26	Capza2 (ENSCGRG00001022803) #27	Met (ENSCGRG00001011551) #28	Cav1 (ENSCGRG00001019680) #29	Cav2 (ENSCGRG00001020610) #30	ENSCGRG00001023123 #31	Tfec (ENSCGRG00001017234) #33	Mdfic (ENSCGRG00001017688) #34	Foxp2 (ENSCGRG00001011096) #35	Ppp1r3a (ENSCGRG00001019903) #36	Smim30 (ENSCGRG00001006732)	Gpr85 (ENSCGRG00001001502) #37
Golden Hamster	MODERN SPECIES	724																Cttnbp2 (ENSMAUG00000014490) #22	Cftr (ENSMAUG00000013946) #23	ENSMAUG00000011480 #24	Wnt2 (ENSMAUG00000012450) #25	St7 (ENSMAUG00000008642) #26	Capza2 (ENSMAUG00000019994) #27	Met (ENSMAUG00000012960) #28	Cav1 (ENSMAUG00000005941) #29	Cav2 (ENSMAUG00000007439) #30	ENSMAUG00000001763 #31	Tfec (ENSMAUG00000001990) #33	Mdfic (ENSMAUG00000015022) #34	Foxp2 (ENSMAUG00000016128) #35	Ppp1r3a (ENSMAUG00000018440) #36	Gpr85 (ENSMAUG00000015334) #37	Bmt2 (ENSMAUG00000019868)
Murinae	ANCESTRAL SPECIES	4	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993.c #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Mus	ANCESTRAL SPECIES	20	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993.c #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Mus_A	ANCESTRAL SPECIES	7	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993.c #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Mus_B	ANCESTRAL SPECIES	20	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993.c #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Mus_C	ANCESTRAL SPECIES	19	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993.c #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
spretus	MODERN SPECIES	15	Tas2r118 (MGP_SPRETEiJ_G0029139)	Rnf148 (MGP_SPRETEiJ_G0029138) #9	Rnf133 (MGP_SPRETEiJ_G0029137)	Cadps2 (MGP_SPRETEiJ_G0029136) #8	Fezf1 (MGP_SPRETEiJ_G0029135) #10	Aass (MGP_SPRETEiJ_G0029134) #11	Ptprz1 (MGP_SPRETEiJ_G0029133) #12	Fam3c (MGP_SPRETEiJ_G0029132) #14	Wnt16 (MGP_SPRETEiJ_G0029131) #15	Cped1 (MGP_SPRETEiJ_G0029130) #16	Ing3 (MGP_SPRETEiJ_G0029129)	Tspan12 (MGP_SPRETEiJ_G0029128) #18	Kcnd2 (MGP_SPRETEiJ_G0029127) #19	Ankrd7 (MGP_SPRETEiJ_G0029126)	Lsm8 (MGP_SPRETEiJ_G0029125) #21	Cttnbp2 (MGP_SPRETEiJ_G0029124) #22	Cftr (MGP_SPRETEiJ_G0029123) #23	Asz1 (MGP_SPRETEiJ_G0029122) #24	Wnt2 (MGP_SPRETEiJ_G0029121) #25	St7 (MGP_SPRETEiJ_G0029120) #26	Capza2 (MGP_SPRETEiJ_G0029119) #27	Met (MGP_SPRETEiJ_G0029118) #28	Cav1 (MGP_SPRETEiJ_G0029117) #29	Cav2 (MGP_SPRETEiJ_G0029116) #30	Tes (MGP_SPRETEiJ_G0029115) #31	Tfec (MGP_SPRETEiJ_G0029114) #33	MGP_SPRETEiJ_G0029113 #34	Foxp2 (MGP_SPRETEiJ_G0029112) #35	Ppp1r3a (MGP_SPRETEiJ_G0029111) #36	Smim30 (MGP_SPRETEiJ_G0029110)	Gpr85 (MGP_SPRETEiJ_G0029109) #37
Steppe mouse	MODERN SPECIES	3300	Ptprz1 (ENSMSIG00000018983) #12	ENSMSIG00000019192	Fam3c (ENSMSIG00000019205) #14	Wnt16 (ENSMSIG00000019307) #15	Cped1 (ENSMSIG00000019364) #16	Ing3 (ENSMSIG00000019386)	Tspan12 (ENSMSIG00000019433) #18	Kcnd2 (ENSMSIG00000019456) #19	ENSMSIG00000019470	ENSMSIG00000019486	ENSMSIG00000019508	ENSMSIG00000019517	Ankrd7 (ENSMSIG00000019528)	ENSMSIG00000019550 #21	ENSMSIG00000019569	Cttnbp2 (ENSMSIG00000019587) #22
Mouse	MODERN SPECIES	15	Tas2r118 (ENSMUSG00000043865)	Rnf148 (ENSMUSG00000078179) #9	Rnf133 (ENSMUSG00000051956)	Cadps2 (ENSMUSG00000017978) #8	Fezf1 (ENSMUSG00000029697) #10	Aass (ENSMUSG00000029695) #11	Ptprz1 (ENSMUSG00000068748) #12	Fam3c (ENSMUSG00000029672) #14	Wnt16 (ENSMUSG00000029671) #15	Cped1 (ENSMUSG00000062980) #16	Ing3 (ENSMUSG00000029670)	Tspan12 (ENSMUSG00000029669) #18	Kcnd2 (ENSMUSG00000060882) #19	Ankrd7 (ENSMUSG00000029517)	Lsm8 (ENSMUSG00000044155) #21	Cttnbp2 (ENSMUSG00000000416) #22	Cftr (ENSMUSG00000041301) #23	Asz1 (ENSMUSG00000010796) #24	Wnt2 (ENSMUSG00000010797) #25	St7 (ENSMUSG00000029534) #26	Capza2 (ENSMUSG00000015733) #27	Met (ENSMUSG00000009376) #28	Cav1 (ENSMUSG00000007655) #29	Cav2 (ENSMUSG00000000058) #30	Tes (ENSMUSG00000029552) #31	Tfec (ENSMUSG00000029553) #33	Mdfic (ENSMUSG00000041390) #34	Foxp2 (ENSMUSG00000029563) #35	Ppp1r3a (ENSMUSG00000042717) #36	Smim30 (ENSMUSG00000052419)	Gpr85 (ENSMUSG00000048216) #37
Ryukyu mouse	MODERN SPECIES	15	Tas2r118 (MGP_CAROLIEiJ_G0028139)	Rnf148 (MGP_CAROLIEiJ_G0028138) #9	Rnf133 (MGP_CAROLIEiJ_G0028137)	Cadps2 (MGP_CAROLIEiJ_G0028136) #8	Fezf1 (MGP_CAROLIEiJ_G0028135) #10	Aass (MGP_CAROLIEiJ_G0028134) #11	Ptprz1 (MGP_CAROLIEiJ_G0028133) #12	Fam3c (MGP_CAROLIEiJ_G0028132) #14	Wnt16 (MGP_CAROLIEiJ_G0028131) #15	Cped1 (MGP_CAROLIEiJ_G0028130) #16	Ing3 (MGP_CAROLIEiJ_G0028129)	Tspan12 (MGP_CAROLIEiJ_G0028128) #18	Kcnd2 (MGP_CAROLIEiJ_G0028127) #19	Ankrd7 (MGP_CAROLIEiJ_G0028126)	Lsm8 (MGP_CAROLIEiJ_G0028125) #21	Cttnbp2 (MGP_CAROLIEiJ_G0028124) #22	Cftr (MGP_CAROLIEiJ_G0028123) #23	Asz1 (MGP_CAROLIEiJ_G0028122) #24	Wnt2 (MGP_CAROLIEiJ_G0028121) #25	St7 (MGP_CAROLIEiJ_G0028120) #26	Capza2 (MGP_CAROLIEiJ_G0028119) #27	Met (MGP_CAROLIEiJ_G0028118) #28	Cav1 (MGP_CAROLIEiJ_G0028117) #29	Cav2 (MGP_CAROLIEiJ_G0028116) #30	Tes (MGP_CAROLIEiJ_G0028115) #31	Tfec (MGP_CAROLIEiJ_G0028114) #33	MGP_CAROLIEiJ_G0028113 #34	Foxp2 (MGP_CAROLIEiJ_G0028112) #35	Ppp1r3a (MGP_CAROLIEiJ_G0028111) #36	Smim30 (MGP_CAROLIEiJ_G0028110)	Gpr85 (MGP_CAROLIEiJ_G0028109) #37
Shrew mouse	MODERN SPECIES	11	Tas2r118 (MGP_PahariEiJ_G0021895)	Rnf148 (MGP_PahariEiJ_G0021894) #9	Rnf133 (MGP_PahariEiJ_G0021893)	Cadps2 (MGP_PahariEiJ_G0021892) #8	Fezf1 (MGP_PahariEiJ_G0021891) #10	Aass (MGP_PahariEiJ_G0021890) #11	Ptprz1 (MGP_PahariEiJ_G0021889) #12	Fam3c (MGP_PahariEiJ_G0021888) #14	Wnt16 (MGP_PahariEiJ_G0021887) #15	Cped1 (MGP_PahariEiJ_G0021886) #16	Ing3 (MGP_PahariEiJ_G0021885)	Tspan12 (MGP_PahariEiJ_G0021884) #18	Kcnd2 (MGP_PahariEiJ_G0021883) #19	Ankrd7 (MGP_PahariEiJ_G0021882)	MGP_PahariEiJ_G0021881 #21	Cttnbp2 (MGP_PahariEiJ_G0021880) #22	Cftr (MGP_PahariEiJ_G0021879) #23	Asz1 (MGP_PahariEiJ_G0021878) #24	Wnt2 (MGP_PahariEiJ_G0021877) #25	St7 (MGP_PahariEiJ_G0021876) #26	Capza2 (MGP_PahariEiJ_G0021875) #27	Met (MGP_PahariEiJ_G0021874) #28	Cav1 (MGP_PahariEiJ_G0021873) #29	Cav2 (MGP_PahariEiJ_G0021872) #30	Tes (MGP_PahariEiJ_G0021871) #31	Tfec (MGP_PahariEiJ_G0021870) #33	MGP_PahariEiJ_G0021869 #34	Foxp2 (MGP_PahariEiJ_G0021868) #35	Ppp1r3a (MGP_PahariEiJ_G0021867) #36	Smim30 (MGP_PahariEiJ_G0021866)	Gpr85 (MGP_PahariEiJ_G0021865) #37
Rat	MODERN SPECIES	14	ENSRNOG00000068406	AABR07025928.1 (ENSRNOG00000056660)	Aass (ENSRNOG00000039494) #11	Ptprz1 (ENSRNOG00000006030) #12	ENSRNOG00000063098	Fam3c (ENSRNOG00000060349) #14	Wnt16 (ENSRNOG00000005781) #15	Cped1 (ENSRNOG00000021840) #16	Ing3 (ENSRNOG00000005496)	ENSRNOG00000064820	Tspan12 (ENSRNOG00000059016) #18	Kcnd2 (ENSRNOG00000067416) #19	LOC685171 (ENSRNOG00000058543)	Ankrd7 (ENSRNOG00000055481)	Lsm8 (ENSRNOG00000070946) #21	Cttnbp2 (ENSRNOG00000061845) #22	Cftr (ENSRNOG00000055103) #23	ENSRNOG00000067965	Asz1 (ENSRNOG00000060343) #24	Wnt2 (ENSRNOG00000051905) #25	AC123138.1 (ENSRNOG00000012822)	ST7 (ENSRNOG00000056243) #26	Capza2 (ENSRNOG00000056207) #27	Met (ENSRNOG00000052745) #28	Cav1 (ENSRNOG00000056836) #29	Cav2 (ENSRNOG00000057713) #30	Tes (ENSRNOG00000051952) #31	Tfec (ENSRNOG00000061595) #33	RGD1562178 (ENSRNOG00000052702)	Mdfic (ENSRNOG00000053787) #34	Rbmxl1b (ENSRNOG00000059347)
Upper Galilee mountains blind mole rat	MODERN SPECIES	433															Lsm8 (ENSNGAG00000016554) #21	Cttnbp2 (ENSNGAG00000000754) #22	Cftr (ENSNGAG00000012834) #23	Asz1 (ENSNGAG00000019679) #24	Wnt2 (ENSNGAG00000001319) #25	St7 (ENSNGAG00000016185) #26	Capza2 (ENSNGAG00000001281) #27	Met (ENSNGAG00000014046) #28	Cav1 (ENSNGAG00000019636) #29	Cav2 (ENSNGAG00000015969) #30	ENSNGAG00000016766 #31	ENSNGAG00000019096	Tfec (ENSNGAG00000014386) #33
Lesser Egyptian jerboa	MODERN SPECIES	67	Ptprz1 (ENSJJAG00000014324) #12	ENSJJAG00000018547	ENSJJAG00000020378	Fam3c (ENSJJAG00000019764) #14	Wnt16 (ENSJJAG00000016207) #15	ENSJJAG00000013375	Cped1 (ENSJJAG00000023207) #16	Ing3 (ENSJJAG00000007662)	Tspan12 (ENSJJAG00000006214) #18	Kcnd2 (ENSJJAG00000000160) #19	ENSJJAG00000019540	ENSJJAG00000016745	ENSJJAG00000011628	Lsm8 (ENSJJAG00000009031) #21	ENSJJAG00000003447	Cttnbp2 (ENSJJAG00000013148) #22	ENSJJAG00000022583 #23	Asz1 (ENSJJAG00000022495) #24	Wnt2 (ENSJJAG00000017203) #25	St7 (ENSJJAG00000004440) #26	ENSJJAG00000021128 #27	Met (ENSJJAG00000012125) #28	ENSJJAG00000000187	Cav1 (ENSJJAG00000021423) #29	Cav2 (ENSJJAG00000020789) #30	ENSJJAG00000019082 #31	Tfec (ENSJJAG00000015649) #33	ENSJJAG00000012867	Mdfic (ENSJJAG00000012683) #34	ENSJJAG00000016852 #35	Ppp1r3a (ENSJJAG00000014929) #36
Kangaroo rat	MODERN SPECIES	367	Slc13a1 (ENSDORG00000000630) #7	Cadps2 (ENSDORG00000016250) #8	Rnf133 (ENSDORG00000025983)	Fezf1 (ENSDORG00000027250) #10	Aass (ENSDORG00000010129) #11	Ptprz1 (ENSDORG00000010123) #12	Fam3c (ENSDORG00000014503) #14	Wnt16 (ENSDORG00000014501) #15	Cped1 (ENSDORG00000014498) #16	Ing3 (ENSDORG00000014497)	Tspan12 (ENSDORG00000003102) #18	Kcnd2 (ENSDORG00000003100) #19	ENSDORG00000028967	Ankrd7 (ENSDORG00000002700)	Lsm8 (ENSDORG00000027868) #21	Cttnbp2 (ENSDORG00000005026) #22	ENSDORG00000023544	Cftr (ENSDORG00000005421) #23	Asz1 (ENSDORG00000007590) #24	Wnt2 (ENSDORG00000016233) #25	St7 (ENSDORG00000016230) #26	Capza2 (ENSDORG00000016226) #27	Met (ENSDORG00000002178) #28	Cav1 (ENSDORG00000026258) #29	Cav2 (ENSDORG00000023298) #30	ENSDORG00000016725 #31	ENSDORG00000029823	Tfec (ENSDORG00000004403) #33	Mdfic (ENSDORG00000001488) #34	Foxp2 (ENSDORG00000007040) #35	Ppp1r3a (ENSDORG00000023629) #36
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Sciuridae	ANCESTRAL SPECIES	7	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000182222	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Marmotini	ANCESTRAL SPECIES	35	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212.y #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Marmotini_b	ANCESTRAL SPECIES	193														ENSGT00940000161777.b	ENSGT00730000111212.y #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Arctic ground squirrel	MODERN SPECIES	461														ENSUPAG00010012025	ENSUPAG00010012020 #21	CTTNBP2 (ENSUPAG00010011972) #22	ENSUPAG00010011963 #23	ASZ1 (ENSUPAG00010011943) #24	WNT2 (ENSUPAG00010011934) #25	ST7 (ENSUPAG00010010994) #26
Squirrel	MODERN SPECIES	189															ENSSTOG00000009039 #21	CTTNBP2 (ENSSTOG00000023371) #22	ENSSTOG00000005707 #23	ASZ1 (ENSSTOG00000005688) #24	WNT2 (ENSSTOG00000005674) #25	ST7 (ENSSTOG00000005659) #26	CAPZA2 (ENSSTOG00000024828) #27	MET (ENSSTOG00000029241) #28	CAV1 (ENSSTOG00000029133) #29	CAV2 (ENSSTOG00000021668) #30	TES (ENSSTOG00000025936) #31	TFEC (ENSSTOG00000001224) #33	MDFIC (ENSSTOG00000014533) #34	FOXP2 (ENSSTOG00000008964) #35	PPP1R3A (ENSSTOG00000026781) #36	SMIM30 (ENSSTOG00000028596)	GPR85 (ENSSTOG00000019520) #37
Alpin marmot	MODERN SPECIES	22	TAS2R16 (ENSMMMG00000015086)	RNF148 (ENSMMMG00000015069) #9	CADPS2 (ENSMMMG00000015032) #8	FEZF1 (ENSMMMG00000015014) #10	AASS (ENSMMMG00000014988) #11	PTPRZ1 (ENSMMMG00000014884) #12	FAM3C (ENSMMMG00000014872) #14	WNT16 (ENSMMMG00000014850) #15	CPED1 (ENSMMMG00000014806) #16	ING3 (ENSMMMG00000014787)	TSPAN12 (ENSMMMG00000014770) #18	KCND2 (ENSMMMG00000014763) #19	ENSMMMG00000014759 #20	ENSMMMG00000014735	ENSMMMG00000014734	CTTNBP2 (ENSMMMG00000014680) #22	ENSMMMG00000014643 #23	ASZ1 (ENSMMMG00000014625) #24	WNT2 (ENSMMMG00000014617) #25	ST7 (ENSMMMG00000014467) #26	CAPZA2 (ENSMMMG00000014429) #27	MET (ENSMMMG00000014368) #28	CAV1 (ENSMMMG00000014351) #29	ENSMMMG00000014340	TES (ENSMMMG00000014318) #31	TFEC (ENSMMMG00000014310) #33	ENSMMMG00000014306	MDFIC (ENSMMMG00000014295) #34	FOXP2 (ENSMMMG00000014150) #35	PPP1R3A (ENSMMMG00000014132) #36	SMIM30 (ENSMMMG00000014120)
Eurasian red squirrel	MODERN SPECIES	17	TAS2R16 (ENSSVLG00005008847)	CADPS2 (ENSSVLG00005008973) #8	FEZF1 (ENSSVLG00005009793) #10	AASS (ENSSVLG00005009890) #11	PTPRZ1 (ENSSVLG00005010362) #12	ENSSVLG00005013132	FAM3C (ENSSVLG00005013224) #14	WNT16 (ENSSVLG00005013269) #15	CPED1 (ENSSVLG00005013406) #16	ING3 (ENSSVLG00005013543)	TSPAN12 (ENSSVLG00005013639) #18	KCND2 (ENSSVLG00005013713) #19	ENSSVLG00005013739 #20	ENSSVLG00005013879	LSM8 (ENSSVLG00005014022) #21	CTTNBP2 (ENSSVLG00005014155) #22	CFTR (ENSSVLG00005014470) #23	ENSSVLG00005015363 #24	WNT2 (ENSSVLG00005015494) #25	ST7 (ENSSVLG00005015943) #26	CAPZA2 (ENSSVLG00005017995) #27	ENSSVLG00005018122	ENSSVLG00005018138	CAV1 (ENSSVLG00005018241) #29	CAV2 (ENSSVLG00005018312) #30	ENSSVLG00005018352	TES (ENSSVLG00005018372) #31	ENSSVLG00005018477	TFEC (ENSSVLG00005018526) #33	MDFIC (ENSSVLG00005018724) #34	ENSSVLG00005018881 #35
Hystricomorpha	ANCESTRAL SPECIES	14	ENSGT01030000234550.a.a.d.a.a #7	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619.l	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00840000131243	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Hystricomorpha_a	ANCESTRAL SPECIES	43	ENSGT00390000014326	ENSGT01030000234550.a.a.d.a.a #7	ENSGT01100000263477.B.d.b	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619.l	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00840000131243	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Guinea pig	MODERN SPECIES	11	IQUB (ENSCPOG00000006286)	SLC13A1 (ENSCPOG00000006440) #7	TAS2R16 (ENSCPOG00000007419)	RNF133 (ENSCPOG00000035136)	CADPS2 (ENSCPOG00000005875) #8	FEZF1 (ENSCPOG00000013096) #10	AASS (ENSCPOG00000007522) #11	PTPRZ1 (ENSCPOG00000039416) #12	FAM3C (ENSCPOG00000005639) #14	WNT16 (ENSCPOG00000005635) #15	CPED1 (ENSCPOG00000007693) #16	ING3 (ENSCPOG00000023225)	TSPAN12 (ENSCPOG00000011851) #18	KCND2 (ENSCPOG00000011847) #19	LSM8 (ENSCPOG00000035673) #21	CTTNBP2 (ENSCPOG00000004194) #22	CFTR (ENSCPOG00000012767) #23	ASZ1 (ENSCPOG00000009750) #24	WNT2 (ENSCPOG00000033615) #25	ST7 (ENSCPOG00000015621) #26	CAPZA2 (ENSCPOG00000007677) #27	MET (ENSCPOG00000013525) #28	CAV1 (ENSCPOG00000002524) #29	ENSCPOG00000031628	TES (ENSCPOG00000008823) #31	TFEC (ENSCPOG00000012369) #33	MDFIC (ENSCPOG00000034814) #34	FOXP2 (ENSCPOG00000000938) #35	PPP1R3A (ENSCPOG00000012124) #36	SMIM30 (ENSCPOG00000033718)	GPR85 (ENSCPOG00000031444) #37
Hystricomorpha_b	ANCESTRAL SPECIES	62															ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37	ENSGT00390000010382
Long-tailed chinchilla	MODERN SPECIES	139															LSM8 (ENSCLAG00000003726) #21	CTTNBP2 (ENSCLAG00000003619) #22	CFTR (ENSCLAG00000003484) #23	ASZ1 (ENSCLAG00000003377) #24	WNT2 (ENSCLAG00000003334) #25	ST7 (ENSCLAG00000006207) #26	CAPZA2 (ENSCLAG00000005899) #27	MET (ENSCLAG00000005456) #28	CAV1 (ENSCLAG00000005371) #29	TES (ENSCLAG00000005324) #31	TFEC (ENSCLAG00000005114) #33	MDFIC (ENSCLAG00000005069) #34	FOXP2 (ENSCLAG00000004387) #35	PPP1R3A (ENSCLAG00000004128) #36	SMIM30 (ENSCLAG00000004060)	GPR85 (ENSCLAG00000004007) #37	ENSCLAG00000003944
Degu	MODERN SPECIES	254																CTTNBP2 (ENSODEG00000000966) #22	CFTR (ENSODEG00000001056) #23	ASZ1 (ENSODEG00000001288) #24	WNT2 (ENSODEG00000001299) #25	ST7 (ENSODEG00000001361) #26	ENSODEG00000001510 #27	MET (ENSODEG00000001007) #28	CAV1 (ENSODEG00000001377) #29	ENSODEG00000001807	TES (ENSODEG00000001840) #31	TFEC (ENSODEG00000001900) #33	MDFIC (ENSODEG00000001945) #34	FOXP2 (ENSODEG00000002893) #35
Lagomorpha	ANCESTRAL SPECIES	24	ENSGT00390000014326	ENSGT01030000234550.a.a.d.a.a #7	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Rabbit	MODERN SPECIES	18	FEZF1 (ENSOCUG00000021285) #10	AASS (ENSOCUG00000013237) #11	PTPRZ1 (ENSOCUG00000013209) #12	FAM3C (ENSOCUG00000003351) #14	WNT16 (ENSOCUG00000014744) #15	CPED1 (ENSOCUG00000005778) #16	ING3 (ENSOCUG00000001881)	ENSOCUG00000034467	TSPAN12 (ENSOCUG00000001875) #18	KCND2 (ENSOCUG00000004149) #19	ENSOCUG00000037642	ENSOCUG00000023965	ENSOCUG00000032257	ENSOCUG00000021922	LSM8 (ENSOCUG00000017359) #21	CTTNBP2 (ENSOCUG00000001386) #22	ENSOCUG00000038182	CFTR (ENSOCUG00000010733) #23	ASZ1 (ENSOCUG00000015962) #24	WNT2 (ENSOCUG00000016173) #25	ST7 (ENSOCUG00000016156) #26	MET (ENSOCUG00000013060) #28	CAV1 (ENSOCUG00000014520) #29	CAV2 (ENSOCUG00000014515) #30	TES (ENSOCUG00000008491) #31	TFEC (ENSOCUG00000006292) #33	MDFIC (ENSOCUG00000012455) #34	FOXP2 (ENSOCUG00000001801) #35	ENSOCUG00000024434	ENSOCUG00000038780	PPP1R3A (ENSOCUG00000000303) #36
Pika	MODERN SPECIES	4443														ENSOPRG00000014817	LSM8 (ENSOPRG00000014809) #21	CTTNBP2 (ENSOPRG00000014785) #22	CFTR (ENSOPRG00000014721) #23
Tree shrew	MODERN SPECIES	4479																CTTNBP2 (ENSTBEG00000000515) #22
Laurasiatheria	ANCESTRAL SPECIES	21	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Laurasiatheria_a	ANCESTRAL SPECIES	14	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Artiodactyla	ANCESTRAL SPECIES	11	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Artiodactyla_a	ANCESTRAL SPECIES	11	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Artiodactyla_b	ANCESTRAL SPECIES	11	ENSGT01100000263477.B.d.b	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Cetacea	ANCESTRAL SPECIES	13	ENSGT00390000014326	ENSGT00990000210481	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a.c.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Odontoceti	ANCESTRAL SPECIES	12	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT01010000229619	ENSGT00950000183004.a.b.a.a.c.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00390000018696.ab.b	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Odontoceti_a	ANCESTRAL SPECIES	13	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT01010000229619	ENSGT00950000183004.a.b.a.a.c.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00390000018696.ab.b	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Dolphin	MODERN SPECIES	2178																CTTNBP2 (ENSTTRG00000001709) #22
Odontoceti_b	ANCESTRAL SPECIES	13	ENSGT00940000162417.B	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT01010000229619	ENSGT00950000183004.a.b.a.a.c.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00390000018696.ab.b	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Vaquita	MODERN SPECIES	20	ENSPSNG00000004162	CADPS2 (ENSPSNG00000004337) #8	FEZF1 (ENSPSNG00000004653) #10	AASS (ENSPSNG00000004701) #11	PTPRZ1 (ENSPSNG00000005040) #12	ENSPSNG00000005910	FAM3C (ENSPSNG00000005949) #14	WNT16 (ENSPSNG00000005981) #15	CPED1 (ENSPSNG00000006017) #16	ING3 (ENSPSNG00000006054)	TSPAN12 (ENSPSNG00000006100) #18	KCND2 (ENSPSNG00000006128) #19	ENSPSNG00000006167	ENSPSNG00000006207	LSM8 (ENSPSNG00000006282) #21	CTTNBP2 (ENSPSNG00000006336) #22	ENSPSNG00000006366	CFTR (ENSPSNG00000006540) #23	ASZ1 (ENSPSNG00000006996) #24	WNT2 (ENSPSNG00000007074) #25	ST7 (ENSPSNG00000007232) #26	CAPZA2 (ENSPSNG00000007567) #27	MET (ENSPSNG00000007686) #28	CAV1 (ENSPSNG00000007757) #29	CAV2 (ENSPSNG00000007812) #30	TES (ENSPSNG00000007868) #31	TFEC (ENSPSNG00000008020) #33	ENSPSNG00000008210	MDFIC (ENSPSNG00000008245) #34	FOXP2 (ENSPSNG00000008393) #35	PPP1R3A (ENSPSNG00000009191) #36
Monodontidae	ANCESTRAL SPECIES	12	ENSGT00940000162417.B	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00390000002517.a.b.b.c.b.b	ENSGT00950000183004.a.b.a.a.c.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00390000018696.ab.b	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Narwhal	MODERN SPECIES	306	CADPS2 (ENSMMNG00015009046) #8	FEZF1 (ENSMMNG00015009003) #10	ENSMMNG00015008989	AASS (ENSMMNG00015008962) #11	PTPRZ1 (ENSMMNG00015008685) #12	ENSMMNG00015008511	ENSMMNG00015008492 #14	WNT16 (ENSMMNG00015008481) #15	CPED1 (ENSMMNG00015008430) #16	ING3 (ENSMMNG00015008385)	TSPAN12 (ENSMMNG00015008372) #18	ENSMMNG00015008364	KCND2 (ENSMMNG00015008351) #19	ENSMMNG00015008326	LSM8 (ENSMMNG00015008300) #21	CTTNBP2 (ENSMMNG00015008242) #22	CFTR (ENSMMNG00015008191) #23	ASZ1 (ENSMMNG00015008132) #24	WNT2 (ENSMMNG00015008114) #25	ENSMMNG00015008101	ST7 (ENSMMNG00015007638) #26	CAPZA2 (ENSMMNG00015007277) #27	MET (ENSMMNG00015007208) #28	CAV1 (ENSMMNG00015007169) #29	CAV2 (ENSMMNG00015007157) #30	TES (ENSMMNG00015007124) #31	TFEC (ENSMMNG00015007059) #33	ENSMMNG00015007012	MDFIC (ENSMMNG00015006992) #34	FOXP2 (ENSMMNG00015006660) #35	PPP1R3A (ENSMMNG00015006522) #36
Beluga whale	MODERN SPECIES	72	CADPS2 (ENSDLEG00000007974) #8	FEZF1 (ENSDLEG00000008135) #10	AASS (ENSDLEG00000008185) #11	ENSDLEG00000008472	PTPRZ1 (ENSDLEG00000008502) #12	ENSDLEG00000008697	ENSDLEG00000008725 #14	WNT16 (ENSDLEG00000008763) #15	CPED1 (ENSDLEG00000008806) #16	ING3 (ENSDLEG00000008957)	TSPAN12 (ENSDLEG00000009002) #18	ENSDLEG00000009040	ENSDLEG00000009057 #19	ENSDLEG00000009082	LSM8 (ENSDLEG00000009162) #21	CTTNBP2 (ENSDLEG00000009204) #22	CFTR (ENSDLEG00000009386) #23	ASZ1 (ENSDLEG00000010228) #24	ENSDLEG00000010374	WNT2 (ENSDLEG00000010382) #25	ST7 (ENSDLEG00000010402) #26	CAPZA2 (ENSDLEG00000010489) #27	MET (ENSDLEG00000010515) #28	CAV1 (ENSDLEG00000010596) #29	CAV2 (ENSDLEG00000010616) #30	TES (ENSDLEG00000010623) #31	TFEC (ENSDLEG00000010641) #33	ENSDLEG00000010692	MDFIC (ENSDLEG00000010705) #34	FOXP2 (ENSDLEG00000010860) #35	PPP1R3A (ENSDLEG00000012709) #36
Sperm whale	MODERN SPECIES	16	SLC13A1 (ENSPCTG00005002663) #7	CADPS2 (ENSPCTG00005002800) #8	FEZF1 (ENSPCTG00005003111) #10	AASS (ENSPCTG00005003140) #11	PTPRZ1 (ENSPCTG00005003179) #12	ENSPCTG00005003246	FAM3C (ENSPCTG00005003260) #14	WNT16 (ENSPCTG00005003279) #15	CPED1 (ENSPCTG00005003296) #16	ING3 (ENSPCTG00005003320)	TSPAN12 (ENSPCTG00005003339) #18	ENSPCTG00005003353	ENSPCTG00005003369 #19	ENSPCTG00005003384	LSM8 (ENSPCTG00005003422) #21	CTTNBP2 (ENSPCTG00005003446) #22	CFTR (ENSPCTG00005003550) #23	ASZ1 (ENSPCTG00005003795) #24	WNT2 (ENSPCTG00005003803) #25	ST7 (ENSPCTG00005003837) #26	CAPZA2 (ENSPCTG00005003893) #27	MET (ENSPCTG00005000258) #28	CAV1 (ENSPCTG00005000307) #29	ENSPCTG00005000318	CAV2 (ENSPCTG00005000335) #30	TES (ENSPCTG00005000357) #31	TFEC (ENSPCTG00005000435) #33	ENSPCTG00005000563	MDFIC (ENSPCTG00005000577) #34	FOXP2 (ENSPCTG00005000718) #35	PPP1R3A (ENSPCTG00005001346) #36
Blue whale	MODERN SPECIES	20	SLC13A1 (ENSBMSG00010006206) #7	TAS2R16 (ENSBMSG00010006234)	ENSBMSG00010006242	CADPS2 (ENSBMSG00010006309) #8	AASS (ENSBMSG00010006576) #11	PTPRZ1 (ENSBMSG00010006646) #12	ENSBMSG00010006715 #14	WNT16 (ENSBMSG00010006732) #15	CPED1 (ENSBMSG00010006795) #16	ING3 (ENSBMSG00010006892)	TSPAN12 (ENSBMSG00010006907) #18	KCND2 (ENSBMSG00010006920) #19	ENSBMSG00010006935	ENSBMSG00010006964	LSM8 (ENSBMSG00010007016) #21	CTTNBP2 (ENSBMSG00010007046) #22	CFTR (ENSBMSG00010007097) #23	ASZ1 (ENSBMSG00010007122) #24	WNT2 (ENSBMSG00010007149) #25	ST7 (ENSBMSG00010007217) #26	CAPZA2 (ENSBMSG00010007309) #27	MET (ENSBMSG00010007360) #28	CAV1 (ENSBMSG00010007383) #29	CAV2 (ENSBMSG00010007399) #30	TES (ENSBMSG00010007413) #31	ENSBMSG00010007423	TFEC (ENSBMSG00010007456) #33	ENSBMSG00010007525	MDFIC (ENSBMSG00010007534) #34	FOXP2 (ENSBMSG00010007623) #35	PPP1R3A (ENSBMSG00010008008) #36
Pecora	ANCESTRAL SPECIES	11	ENSGT00390000011863.d	ENSGT01070000253775.a.d.a.a.a.a	ENSGT00510000047522	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00550000074844	ENSGT00940000156003	ENSGT00940000162514	ENSGT00940000155419	ENSGT00940000154738.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684.b	ENSGT00400000023684.a
Percora_a	ANCESTRAL SPECIES	11	ENSGT00510000047522	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00550000074844	ENSGT00940000156003	ENSGT00940000162514	ENSGT00940000155419	ENSGT00940000154738.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a	ENSGT00940000153143.a.a.f.e.b.a	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684.b	ENSGT00400000023684.a
Bovidae	ANCESTRAL SPECIES	12	ENSGT00510000047522	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00550000074844	ENSGT00940000156003	ENSGT00940000162514	ENSGT00940000155419	ENSGT00940000154738.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a	ENSGT00940000153143.a.a.f.e.b.a	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684.b	ENSGT00890000139436.B #37
Caprinae	ANCESTRAL SPECIES	10	ENSGT01070000253775.a.d.a.a.a.a	ENSGT00510000047522	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00550000074844	ENSGT00940000156003	ENSGT00940000162514	ENSGT00940000155419	ENSGT00940000154738.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b.f #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684.a	ENSGT00890000139436.B #37
Rambouillet Sheep	MODERN SPECIES	20	DLD (ENSOARG00020013466)	LAMB1 (ENSOARG00020013761)	ENSOARG00020014254	NRCAM (ENSOARG00020014477)	PNPLA8 (ENSOARG00020015435)	ENSOARG00020015549	NME8 (ENSOARG00020015579)	SFRP4 (ENSOARG00020015741)	EPDR1 (ENSOARG00020015795)	STARD3NL (ENSOARG00020015943)	ENSOARG00020016021	ENSOARG00020016083	ENSOARG00020016114	ENSOARG00020016145	ENSOARG00020016185	CTTNBP2 (ENSOARG00020016233) #22	CFTR (ENSOARG00020016363) #23	ASZ1 (ENSOARG00020000134) #24	WNT2 (ENSOARG00020000160) #25	ST7 (ENSOARG00020000287) #26	ENSOARG00020000812 #27	MET (ENSOARG00020000868) #28	CAV1 (ENSOARG00020000956) #29	CAV2 (ENSOARG00020000978) #30	TES (ENSOARG00020000994) #31	TFEC (ENSOARG00020001041) #33	MDFIC (ENSOARG00020001137) #34	FOXP2 (ENSOARG00020001223) #35	PPP1R3A (ENSOARG00020001807) #36	ENSOARG00020001818	SMIM30 (ENSOARG00020001844)
Goat	MODERN SPECIES	23	CBLL1 (ENSCHIG00000017501)	SLC26A3 (ENSCHIG00000027159)	DLD (ENSCHIG00000024053)	LAMB1 (ENSCHIG00000025890)	LAMB4 (ENSCHIG00000017010)	NRCAM (ENSCHIG00000026694)	PNPLA8 (ENSCHIG00000022837)	NME8 (ENSCHIG00000025859)	SFRP4 (ENSCHIG00000008577)	EPDR1 (ENSCHIG00000019001)	ENSCHIG00000011047	STARD3NL (ENSCHIG00000018771)	ENSCHIG00000026070	ENSCHIG00000019241	ENSCHIG00000012425	CTTNBP2 (ENSCHIG00000014972) #22	CFTR (ENSCHIG00000017768) #23	ASZ1 (ENSCHIG00000019569) #24	WNT2 (ENSCHIG00000011054) #25	ST7 (ENSCHIG00000020176) #26	CAPZA2 (ENSCHIG00000013697) #27	MET (ENSCHIG00000024998) #28	CAV1 (ENSCHIG00000019290) #29	CAV2 (ENSCHIG00000013089) #30	TES (ENSCHIG00000026164) #31	TFEC (ENSCHIG00000019490) #33	MDFIC (ENSCHIG00000011870) #34	FOXP2 (ENSCHIG00000023721) #35	ENSCHIG00000008927 #35	PPP1R3A (ENSCHIG00000008771) #36	ENSCHIG00000022950
Bovinae	ANCESTRAL SPECIES	8	ENSGT01070000253775.a.d.a.a.a.a	ENSGT00510000047522	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00550000074844	ENSGT00940000156003	ENSGT00940000162514	ENSGT00940000155419	ENSGT00940000154738.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476.q	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684.b	ENSGT00890000139436.B #37
American bison	MODERN SPECIES	3370															ENSBBBG00000024408	CTTNBP2 (ENSBBBG00000008038) #22	CFTR (ENSBBBG00000024730) #23	ASZ1 (ENSBBBG00000024781) #24	WNT2 (ENSBBBG00000024800) #25	ST7 (ENSBBBG00000025162) #26	CAPZA2 (ENSBBBG00000025209) #27	ENSBBBG00000006674 #28	ENSBBBG00000006678	CAV1 (ENSBBBG00000007769) #29	CAV2 (ENSBBBG00000025261) #30	TES (ENSBBBG00000025359) #31	TFEC (ENSBBBG00000006745) #33	MDFIC (ENSBBBG00000025491) #34	FOXP2 (ENSBBBG00000009195) #35	PPP1R3A (ENSBBBG00000009196) #36	SMIM30 (ENSBBBG00000009198)
Bos	DUPLICATION
Bos	ANCESTRAL SPECIES	8	ENSGT00550000074844	ENSGT00940000156003	ENSGT00940000162514	ENSGT00940000155419	ENSGT00940000154738.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476.q	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.a.a	ENSGT00940000153143.a.a.f.e.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.b	ENSGT00940000158293.g #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684.b	ENSGT00890000139436.B #37
Bos_a	ANCESTRAL SPECIES	12	ENSGT01070000253775.a.d.a.a.a.a	ENSGT00510000047522	ENSGT01070000253775.a.d.a.a.a.b	ENSGT00550000074844	ENSGT00940000156003	ENSGT00940000162514	ENSGT00940000155419	ENSGT00940000154738.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476.q	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.b	ENSGT00940000158293.g #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684.b	ENSGT00390000010382
Domestic yak	MODERN SPECIES	23	SLC26A4 (ENSBGRG00000006083)	CBLL1 (ENSBGRG00000005990)	SLC26A3 (ENSBGRG00000005777)	DLD (ENSBGRG00000005619)	LAMB1 (ENSBGRG00000005449)	ENSBGRG00000005405	NRCAM (ENSBGRG00000005218)	PNPLA8 (ENSBGRG00000005147)	ENSBGRG00000005138	NME8 (ENSBGRG00000005050)	SFRP4 (ENSBGRG00000005021)	EPDR1 (ENSBGRG00000004974)	ENSBGRG00000004925	ENSBGRG00000004851	ENSBGRG00000004815	CTTNBP2 (ENSBGRG00000004719) #22	ENSBGRG00000004699	CFTR (ENSBGRG00000003733) #23	ASZ1 (ENSBGRG00000003561) #24	WNT2 (ENSBGRG00000003541) #25	ST7 (ENSBGRG00000002726) #26	CAPZA2 (ENSBGRG00000002497) #27	MET (ENSBGRG00000002220) #28	CAV1 (ENSBGRG00000002134) #29	CAV2 (ENSBGRG00000002106) #30	TES (ENSBGRG00000002095) #31	TFEC (ENSBGRG00000002059) #33	MDFIC (ENSBGRG00000002028) #34	ENSBGRG00000001995	FOXP2 (ENSBGRG00000001901) #35	PPP1R3A (ENSBGRG00000001862) #36
Wild yak	MODERN SPECIES	1750															ENSBMUG00000013270	ENSBMUG00000013218 #22
Bos_b	ANCESTRAL SPECIES	7	ENSGT00550000074844	ENSGT00940000156003	ENSGT00940000162514	ENSGT00940000155419	ENSGT00940000154738.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476.q	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.a.a	ENSGT00940000153143.a.a.f.e.b.a	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.a.b	ENSGT00940000153143.a.b.b.a.b.d.b.b.f.b.a.b	ENSGT00940000158293.g #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684.b	ENSGT00890000139436.B #37
Hybrid Bos Indicus	MODERN SPECIES	23	DLD (ENSBIXG00005028933)	LAMB1 (ENSBIXG00005002162)	ENSBIXG00005005108	NRCAM (ENSBIXG00005005186)	PNPLA8 (ENSBIXG00005001775)	NME8 (ENSBIXG00005005213)	SFRP4 (ENSBIXG00005029186)	EPDR1 (ENSBIXG00005029193)	ENSBIXG00005001596	ENSBIXG00005029235	ENSBIXG00005009371	ENSBIXG00005000491	ENSBIXG00005009393	ENSBIXG00005009400	ENSBIXG00005009413	CTTNBP2 (ENSBIXG00005009484) #22	CFTR (ENSBIXG00005009586) #23	ASZ1 (ENSBIXG00005009631) #24	WNT2 (ENSBIXG00005009672) #25	ST7 (ENSBIXG00005009830) #26	CAPZA2 (ENSBIXG00005009887) #27	MET (ENSBIXG00005009936) #28	CAV1 (ENSBIXG00005009977) #29	CAV2 (ENSBIXG00005009987) #30	ENSBIXG00005000753	TES (ENSBIXG00005010013) #31	TFEC (ENSBIXG00005010074) #33	MDFIC (ENSBIXG00005006771) #34	FOXP2 (ENSBIXG00005010281) #35	PPP1R3A (ENSBIXG00005010352) #36	SMIM30 (ENSBIXG00005010364)
Cow	MODERN SPECIES	23	SLC26A3 (ENSBTAG00000015547)	DLD (ENSBTAG00000001908)	LAMB1 (ENSBTAG00000011412)	ENSBTAG00000033169	NRCAM (ENSBTAG00000006732)	PNPLA8 (ENSBTAG00000024387)	ENSBTAG00000014795	NME8 (ENSBTAG00000015353)	SFRP4 (ENSBTAG00000015366)	ENSBTAG00000052470	EPDR1 (ENSBTAG00000033197)	STARD3NL (ENSBTAG00000038795)	ENSBTAG00000035945	ENSBTAG00000053502	TARP (ENSBTAG00000036154)	CTTNBP2 (ENSBTAG00000021469) #22	CFTR (ENSBTAG00000006589) #23	ASZ1 (ENSBTAG00000000169) #24	WNT2 (ENSBTAG00000008097) #25	ST7 (ENSBTAG00000010756) #26	CAPZA2 (ENSBTAG00000004072) #27	MET (ENSBTAG00000006161) #28	CAV1 (ENSBTAG00000017869) #29	CAV2 (ENSBTAG00000049397) #30	TES (ENSBTAG00000021204) #31	ENSBTAG00000055251	TFEC (ENSBTAG00000014228) #33	MDFIC (ENSBTAG00000021543) #34	FOXP2 (ENSBTAG00000011246)	UBE2I (ENSBTAG00000054178)	PPP1R3A (ENSBTAG00000006733) #36
Bos	ANCESTRAL SPECIES																	ENSGT00940000158293.h #22
Bos_a	ANCESTRAL SPECIES																	ENSGT00940000158293.h #22
Wild yak	MODERN SPECIES	2565																ENSBMUG00000026830 #22
Siberian musk deer	MODERN SPECIES	88	CBLL1 (ENSMMSG00000014037)	SLC26A3 (ENSMMSG00000013947)	DLD (ENSMMSG00000013862)	LAMB1 (ENSMMSG00000013780)	LAMB4 (ENSMMSG00000013514)	NRCAM (ENSMMSG00000012824)	ENSMMSG00000012688	ENSMMSG00000012672	NME8 (ENSMMSG00000012576)	SFRP4 (ENSMMSG00000012546)	EPDR1 (ENSMMSG00000012520)	STARD3NL (ENSMMSG00000012493)	ENSMMSG00000012465	ENSMMSG00000012448	ENSMMSG00000012423	CTTNBP2 (ENSMMSG00000012357) #22	CFTR (ENSMMSG00000011163) #23	ASZ1 (ENSMMSG00000011026) #24	WNT2 (ENSMMSG00000010995) #25	ST7 (ENSMMSG00000010605) #26	CAPZA2 (ENSMMSG00000010466) #27	ENSMMSG00000010444	MET (ENSMMSG00000010268) #28	CAV1 (ENSMMSG00000010219) #29	CAV2 (ENSMMSG00000010190) #30	TES (ENSMMSG00000010139) #31	TFEC (ENSMMSG00000009921) #33	MDFIC (ENSMMSG00000009816) #34	FOXP2 (ENSMMSG00000007195) #35	PPP1R3A (ENSMMSG00000007054) #36	ENSMMSG00000007022
Yarkand deer	MODERN SPECIES	9	GPR22 (ENSCHYG00000004718)	DUS4L (ENSCHYG00000004725)	ENSCHYG00000004741	SLC26A4 (ENSCHYG00000004765)	CBLL1 (ENSCHYG00000004789)	SLC26A3 (ENSCHYG00000004817)	DLD (ENSCHYG00000004844)	LAMB1 (ENSCHYG00000004893)	NRCAM (ENSCHYG00000005144)	PNPLA8 (ENSCHYG00000005855)	ENSCHYG00000005916	NME8 (ENSCHYG00000005941)	SFRP4 (ENSCHYG00000006040)	EPDR1 (ENSCHYG00000006107)	STARD3NL (ENSCHYG00000006133)	CTTNBP2 (ENSCHYG00000006159) #22	CFTR (ENSCHYG00000006329) #23	ASZ1 (ENSCHYG00000006576) #24	WNT2 (ENSCHYG00000006691) #25	ST7 (ENSCHYG00000006854) #26	CAPZA2 (ENSCHYG00000008671) #27	ENSCHYG00000008862	MET (ENSCHYG00000008936) #28	CAV1 (ENSCHYG00000009187) #29	CAV2 (ENSCHYG00000009254) #30	TES (ENSCHYG00000009300) #31	TFEC (ENSCHYG00000009370) #33	MDFIC (ENSCHYG00000009513) #34	FOXP2 (ENSCHYG00000009585) #35	ENSCHYG00000010022	PPP1R3A (ENSCHYG00000010061) #36
Camelidae	ANCESTRAL SPECIES	2	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Arabian camel	MODERN SPECIES	33	ENSCDRG00005004974	SLC13A1 (ENSCDRG00005004922) #7	CADPS2 (ENSCDRG00005004422) #8	FEZF1 (ENSCDRG00005004315) #10	AASS (ENSCDRG00005004255) #11	PTPRZ1 (ENSCDRG00005004019) #12	FAM3C (ENSCDRG00005003932) #14	WNT16 (ENSCDRG00005003896) #15	CPED1 (ENSCDRG00005003698) #16	ING3 (ENSCDRG00005003592)	TSPAN12 (ENSCDRG00005003541) #18	KCND2 (ENSCDRG00005003477) #19	ENSCDRG00005003449 #20	ENSCDRG00005003389	LSM8 (ENSCDRG00005003356) #21	CTTNBP2 (ENSCDRG00005002863) #22	CFTR (ENSCDRG00005002205) #23	ASZ1 (ENSCDRG00005002142) #24	WNT2 (ENSCDRG00005002127) #25	ST7 (ENSCDRG00005002055) #26	CAPZA2 (ENSCDRG00005002005) #27	MET (ENSCDRG00005001975) #28	CAV1 (ENSCDRG00005001956) #29	CAV2 (ENSCDRG00005001940) #30	ENSCDRG00005001925	TES (ENSCDRG00005001915) #31	TFEC (ENSCDRG00005001818) #33	MDFIC (ENSCDRG00005001780) #34	FOXP2 (ENSCDRG00005001657) #35	PPP1R3A (ENSCDRG00005001622) #36	SMIM30 (ENSCDRG00005001611)
Alpaca	MODERN SPECIES	3405																CTTNBP2 (ENSVPAG00000008763) #22	CFTR (ENSVPAG00000008758) #23	ASZ1 (ENSVPAG00000008757) #24	WNT2 (ENSVPAG00000008754) #25	ENSVPAG00000008752 #26	CAPZA2 (ENSVPAG00000008751) #27	MET (ENSVPAG00000008745) #28	CAV1 (ENSVPAG00000008744) #29	CAV2 (ENSVPAG00000008743) #30
Suina	ANCESTRAL SPECIES	19	ENSGT01030000234550.a.a.d.a.a #7	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Pig	MODERN SPECIES	9	FEZF1 (ENSSSCG00000031221) #10	AASS (ENSSSCG00000016613) #11	PTPRZ1 (ENSSSCG00000016614) #12	FAM3C (ENSSSCG00000016616) #14	WNT16 (ENSSSCG00000016617) #15	CPED1 (ENSSSCG00000016618) #16	ING3 (ENSSSCG00000016619)	TSPAN12 (ENSSSCG00000016620) #18	KCND2 (ENSSSCG00000016621) #19	ENSSSCG00000062673	ENSSSCG00000063110 #20	ENSSSCG00000048258	ENSSSCG00000016623	LSM8 (ENSSSCG00000021652) #21	ENSSSCG00000050786	CTTNBP2 (ENSSSCG00000016625) #22	CFTR (ENSSSCG00000016626) #23	ASZ1 (ENSSSCG00000016627) #24	WNT2 (ENSSSCG00000016628) #25	ST7 (ENSSSCG00000016629) #26	CAPZA2 (ENSSSCG00000028113) #27	MET (ENSSSCG00000024351) #28	CAV1 (ENSSSCG00000016634) #29	CAV2 (ENSSSCG00000016635) #30	TES (ENSSSCG00000040344) #31	TFEC (ENSSSCG00000038138) #33	MDFIC (ENSSSCG00000021885) #34	FOXP2 (ENSSSCG00000016639) #35	PPP1R3A (ENSSSCG00000016640) #36	SMIM30 (ENSSSCG00000057236)	GPR85 (ENSSSCG00000016642) #37
Chacoan peccary	MODERN SPECIES	77																CTTNBP2 (ENSCWAG00000000156) #22	CFTR (ENSCWAG00000000306) #23	ASZ1 (ENSCWAG00000000809) #24	WNT2 (ENSCWAG00000000864) #25	ST7 (ENSCWAG00000000933) #26	CAPZA2 (ENSCWAG00000001039) #27	MET (ENSCWAG00000001097) #28	CAV1 (ENSCWAG00000001146) #29	CAV2 (ENSCWAG00000001180) #30	TES (ENSCWAG00000001199) #31	TFEC (ENSCWAG00000001241) #33	MDFIC (ENSCWAG00000001387) #34	FOXP2 (ENSCWAG00000001545) #35	PPP1R3A (ENSCWAG00000002572) #36	SMIM30 (ENSCWAG00000002580)	GPR85 (ENSCWAG00000002586) #37
Laurasiatheria_b	ANCESTRAL SPECIES	14	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Carnivora	ANCESTRAL SPECIES	15	ENSGT00590000083094.a.b #8	ENSGT00940000163928	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00390000007479.y.b	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Caniformia	ANCESTRAL SPECIES	11	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00390000007479.y.b	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Canidae	ANCESTRAL SPECIES	22	ENSGT00390000014326	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022.a #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Canis_lupus	ANCESTRAL SPECIES	24	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216.q.a #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212.q.b #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022.a #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Dingo	MODERN SPECIES	288										ENSCAFG00020007679 #16	ENSCAFG00020007677	TSPAN12 (ENSCAFG00020007671) #18	ENSCAFG00020007658	ENSCAFG00020007647	ENSCAFG00020007643 #21	CTTNBP2 (ENSCAFG00020007530) #22	CFTR (ENSCAFG00020007486) #23	ASZ1 (ENSCAFG00020007449) #24	WNT2 (ENSCAFG00020007444) #25	ST7 (ENSCAFG00020007405) #26	CAPZA2 (ENSCAFG00020007382) #27	MET (ENSCAFG00020007371) #28	CAV1 (ENSCAFG00020007358) #29	CAV2 (ENSCAFG00020007355) #30	ENSCAFG00020007342	TES (ENSCAFG00020007337) #31	TFEC (ENSCAFG00020007323) #33	ENSCAFG00020007316	MDFIC (ENSCAFG00020007307) #34	ENSCAFG00020007266 #35	ENSCAFG00020007260 #35
Red fox	MODERN SPECIES	89													ENSVVUG00000030316	KCND2 (ENSVVUG00000030320) #19	ENSVVUG00000030332	CTTNBP2 (ENSVVUG00000000172) #22	CFTR (ENSVVUG00000001638) #23	ASZ1 (ENSVVUG00000010394) #24	WNT2 (ENSVVUG00000010406) #25	ST7 (ENSVVUG00000010415) #26	CAPZA2 (ENSVVUG00000010465) #27	MET (ENSVVUG00000010494) #28	CAV1 (ENSVVUG00000010520) #29	TES (ENSVVUG00000010544) #31	TFEC (ENSVVUG00000010561) #33	ENSVVUG00000010635	MDFIC (ENSVVUG00000010659) #34	FOXP2 (ENSVVUG00000010693) #35	ENSVVUG00000010747 #35	ENSVVUG00000010765	PPP1R3A (ENSVVUG00000010770) #36
Caniformia_b	ANCESTRAL SPECIES	9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000153661.b.b.m	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00390000007479.y.b.a	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Mustelinae	ANCESTRAL SPECIES	9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000153661.b.b.m	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00390000007479.y.b.a	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Ferret	MODERN SPECIES	168	CADPS2 (ENSMPUG00000006834) #8	FEZF1 (ENSMPUG00000006851) #10	AASS (ENSMPUG00000006862) #11	PTPRZ1 (ENSMPUG00000006874) #12	FAM3C (ENSMPUG00000006897) #14	WNT16 (ENSMPUG00000006909) #15	CPED1 (ENSMPUG00000006988) #16	ING3 (ENSMPUG00000007054)	TSPAN12 (ENSMPUG00000007059) #18	ENSMPUG00000007063	KCND2 (ENSMPUG00000007070) #19	ENSMPUG00000007078	ENSMPUG00000007093	ENSMPUG00000007100 #21	ENSMPUG00000007110	CTTNBP2 (ENSMPUG00000007124) #22	CFTR (ENSMPUG00000007138) #23	ASZ1 (ENSMPUG00000007155) #24	WNT2 (ENSMPUG00000007172) #25	ST7 (ENSMPUG00000007184) #26	MET (ENSMPUG00000007199) #28	CAV1 (ENSMPUG00000007224) #29	CAV2 (ENSMPUG00000007232) #30	TES (ENSMPUG00000007238) #31	TFEC (ENSMPUG00000007248) #33	ENSMPUG00000007300	MDFIC (ENSMPUG00000007309) #34	FOXP2 (ENSMPUG00000007316) #35	PPP1R3A (ENSMPUG00000007681) #36	ENSMPUG00000018745	ENSMPUG00000007687
American mink	MODERN SPECIES	3	SLC13A1 (ENSNVIG00000001237) #7	CADPS2 (ENSNVIG00000001278) #8	ENSNVIG00000001541	FEZF1 (ENSNVIG00000001557) #10	AASS (ENSNVIG00000001583) #11	PTPRZ1 (ENSNVIG00000001621) #12	FAM3C (ENSNVIG00000001700) #14	WNT16 (ENSNVIG00000001731) #15	CPED1 (ENSNVIG00000001760) #16	ING3 (ENSNVIG00000001859)	TSN12 (ENSNVIG00000001909) #18	KCND2 (ENSNVIG00000001932) #19	ENSNVIG00000001954 #20	ENSNVIG00000001960	LSM8 (ENSNVIG00000001976) #21	CTTNBP2 (ENSNVIG00000002011) #22	CFTR (ENSNVIG00000002052) #23	ASZ1 (ENSNVIG00000002205) #24	WNT2 (ENSNVIG00000002216) #25	ST7 (ENSNVIG00000002263) #26	CAPZA2 (ENSNVIG00000002498) #27	ENSNVIG00000002532 #28	ENSNVIG00000002563	CAV1 (ENSNVIG00000002597) #29	CAV2 (ENSNVIG00000002622) #30	TES (ENSNVIG00000002631) #31	TFEC (ENSNVIG00000002689) #33	MDFIC (ENSNVIG00000002794) #34	FOXP2 (ENSNVIG00000002817) #35	PPP1R3A (ENSNVIG00000003288) #36
Ursidae	ANCESTRAL SPECIES	12	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT01010000229956	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00490000043329.a.a.a.pb.c.b	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685.c #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Ursus	DUPLICATION
Ursus	ANCESTRAL SPECIES	82	ENSGT00390000008099	ENSGT00390000014326	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00490000043329.a.a.a.pb.c.b	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293.i #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33
Polar bear	MODERN SPECIES	281	IQUB (ENSUMAG00000005549)	ENSUMAG00000005539 #7	CADPS2 (ENSUMAG00000004849) #8	FEZF1 (ENSUMAG00000004731) #10	AASS (ENSUMAG00000003535) #11	PTPRZ1 (ENSUMAG00000003260) #12	FAM3C (ENSUMAG00000003239) #14	WNT16 (ENSUMAG00000003225) #15	CPED1 (ENSUMAG00000003165) #16	ING3 (ENSUMAG00000003142)	TSPAN12 (ENSUMAG00000003123) #18	ENSUMAG00000003110	ENSUMAG00000003108	ENSUMAG00000003079	LSM8 (ENSUMAG00000003073) #21	CTTNBP2 (ENSUMAG00000003029) #22	CFTR (ENSUMAG00000003001) #23	ASZ1 (ENSUMAG00000002973) #24	WNT2 (ENSUMAG00000002965) #25	ST7 (ENSUMAG00000002912) #26	CAPZA2 (ENSUMAG00000002886) #27	MET (ENSUMAG00000002307) #28	CAV1 (ENSUMAG00000002191) #29	ENSUMAG00000002184 #30	TES (ENSUMAG00000002178) #31	TFEC (ENSUMAG00000002162) #33
American black bear	MODERN SPECIES	6																ENSUAMG00000007915 #22	CFTR (ENSUAMG00000007890) #23	ASZ1 (ENSUAMG00000007870) #24	WNT2 (ENSUAMG00000007859) #25	ST7 (ENSUAMG00000007814) #26	CAPZA2 (ENSUAMG00000007803) #27	MET (ENSUAMG00000007304) #28	CAV1 (ENSUAMG00000007242) #29	CAV2 (ENSUAMG00000007241) #30	TES (ENSUAMG00000007237) #31	TFEC (ENSUAMG00000007235) #33
Ursus	ANCESTRAL SPECIES																	ENSGT00940000158293.j #22
American black bear	MODERN SPECIES	7																ENSUAMG00000008005 #22
Giant Panda	MODERN SPECIES		CADPS2 (ENSAMEG00000004390) #8	FEZF1 (ENSAMEG00000004386) #10	AASS (ENSAMEG00000004321) #11	PTPRZ1 (ENSAMEG00000004272) #12	FAM3C (ENSAMEG00000006035) #14	WNT16 (ENSAMEG00000006022) #15	CPED1 (ENSAMEG00000006006) #16	ING3 (ENSAMEG00000005975)	TSPAN12 (ENSAMEG00000005955) #18	ENSAMEG00000029289	KCND2 (ENSAMEG00000020256) #19	ENSAMEG00000031336 #20	ENSAMEG00000027977	ENSAMEG00000001159	LSM8 (ENSAMEG00000001162) #21	CTTNBP2 (ENSAMEG00000001163) #22	CFTR (ENSAMEG00000001184) #23	ASZ1 (ENSAMEG00000001244) #24	WNT2 (ENSAMEG00000001256) #25	ST7 (ENSAMEG00000001267) #26	CAPZA2 (ENSAMEG00000001306) #27	MET (ENSAMEG00000001314) #28	CAV1 (ENSAMEG00000027933) #29	CAV2 (ENSAMEG00000029109) #30	TES (ENSAMEG00000018237) #31	TFEC (ENSAMEG00000018238) #33	MDFIC (ENSAMEG00000027010) #34	FOXP2 (ENSAMEG00000002526) #35	PPP1R3A (ENSAMEG00000002577) #36	SMIM30 (ENSAMEG00000019099)	GPR85 (ENSAMEG00000005604) #37
Felidae	ANCESTRAL SPECIES	13	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00390000015224.c.b.b.a.b.a	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00390000007479.y.b	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000163382 #9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00390000015224.c.b.b.a.b.a	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00900000143058	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000163382 #9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00390000015224.c.b.b.a.b.a	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00900000143058	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684
leopard	MODERN SPECIES	72														ENSPPRG00000006566	LSM8 (ENSPPRG00000006444) #21	CTTNBP2 (ENSPPRG00000006253) #22	ENSPPRG00000005928	CFTR (ENSPPRG00000005895) #23	ASZ1 (ENSPPRG00000005580) #24	WNT2 (ENSPPRG00000005517) #25	ST7 (ENSPPRG00000004797) #26	CAPZA2 (ENSPPRG00000002625) #27	ENSPPRG00000018383 #28	ENSPPRG00000002566	CAV1 (ENSPPRG00000001995) #29	CAV2 (ENSPPRG00000001790) #30	TES (ENSPPRG00000001505) #31	TFEC (ENSPPRG00000001348) #33	MDFIC (ENSPPRG00000000981) #34	FOXP2 (ENSPPRG00000000808) #35	ENSPPRG00000014527 #35
lion	MODERN SPECIES	2	SLC13A1 (ENSPLOG00000006227) #7	CADPS2 (ENSPLOG00000005636) #8	FEZF1 (ENSPLOG00000005395) #10	AASS (ENSPLOG00000005333) #11	PTPRZ1 (ENSPLOG00000004914) #12	FAM3C (ENSPLOG00000004694) #14	WNT16 (ENSPLOG00000004662) #15	CPED1 (ENSPLOG00000004600) #16	ING3 (ENSPLOG00000004574)	TSPAN12 (ENSPLOG00000004557) #18	KCND2 (ENSPLOG00000004548) #19	ENSPLOG00000004539 #20	ENSPLOG00000004535	ENSPLOG00000004527	LSM8 (ENSPLOG00000004510) #21	CTTNBP2 (ENSPLOG00000004483) #22	CFTR (ENSPLOG00000004296) #23	ASZ1 (ENSPLOG00000004231) #24	WNT2 (ENSPLOG00000004225) #25	ST7 (ENSPLOG00000003747) #26	CAPZA2 (ENSPLOG00000003487) #27	ENSPLOG00000003404	CAV1 (ENSPLOG00000003388) #29	CAV2 (ENSPLOG00000003376) #30	TES (ENSPLOG00000003361) #31	TFEC (ENSPLOG00000003253) #33	MDFIC (ENSPLOG00000003217) #34	FOXP2 (ENSPLOG00000003059) #35	PPP1R3A (ENSPLOG00000003004) #36	SMIM30 (ENSPLOG00000002985)	GPR85 (ENSPLOG00000002971) #37
Tiger	MODERN SPECIES	296	IQUB (ENSPTIG00000020106)	SLC13A1 (ENSPTIG00000019436) #7	ENSPTIG00000019227 #9	CADPS2 (ENSPTIG00000008072) #8	FEZF1 (ENSPTIG00000006097) #10	AASS (ENSPTIG00000020365) #11	PTPRZ1 (ENSPTIG00000014785) #12	FAM3C (ENSPTIG00000014410) #14	WNT16 (ENSPTIG00000013116) #15	CPED1 (ENSPTIG00000010438) #16	ING3 (ENSPTIG00000008202)	TSPAN12 (ENSPTIG00000007270) #18	KCND2 (ENSPTIG00000006572) #19	ENSPTIG00000005580	LSM8 (ENSPTIG00000004722) #21	CTTNBP2 (ENSPTIG00000019650) #22	ENSPTIG00000017786	CFTR (ENSPTIG00000017030) #23	ASZ1 (ENSPTIG00000014931) #24	WNT2 (ENSPTIG00000014444) #25	ST7 (ENSPTIG00000022098) #26	CAPZA2 (ENSPTIG00000022058) #27	ENSPTIG00000002142 #28	ENSPTIG00000021973	CAV1 (ENSPTIG00000021784) #29	CAV2 (ENSPTIG00000021626) #30	TES (ENSPTIG00000021347) #31	TFEC (ENSPTIG00000018257) #33	MDFIC (ENSPTIG00000017402) #34	FOXP2 (ENSPTIG00000005044) #35	ENSPTIG00000003248 #35
Cat	MODERN SPECIES	1	FEZF1 (ENSFCAG00000013521) #10	AASS (ENSFCAG00000029895) #11	PTPRZ1 (ENSFCAG00000015760) #12	ENSFCAG00000030800	WNT16 (ENSFCAG00000029148) #15	FAM3C (ENSFCAG00000023087) #14	CPED1 (ENSFCAG00000023648) #16	ING3 (ENSFCAG00000029472)	TSPAN12 (ENSFCAG00000023943) #18	KCND2 (ENSFCAG00000007877) #19	ENSFCAG00000038564 #20	ENSFCAG00000047748	ENSFCAG00000031973	LSM8 (ENSFCAG00000036620) #21	ENSFCAG00000032304	CTTNBP2 (ENSFCAG00000014956) #22	CFTR (ENSFCAG00000014955) #23	ASZ1 (ENSFCAG00000023842) #24	WNT2 (ENSFCAG00000036421) #25	ST7 (ENSFCAG00000013253) #26	CAPZA2 (ENSFCAG00000027103) #27	MET (ENSFCAG00000009534) #28	CAV1 (ENSFCAG00000034785) #29	CAV2 (ENSFCAG00000023324) #30	TES (ENSFCAG00000029911) #31	TFEC (ENSFCAG00000027627) #33	MDFIC (ENSFCAG00000046079) #34	FOXP2 (ENSFCAG00000006921) #35	PPP1R3A (ENSFCAG00000026838) #36	SMIM30 (ENSFCAG00000040441)	GPR85 (ENSFCAG00000023487) #37
Laurasiatheria_c	ANCESTRAL SPECIES	13	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Equus	ANCESTRAL SPECIES	13	ENSGT00390000014326	ENSGT01030000234550.a.a.d.a.a #7	ENSGT01100000263477.B.d.b	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
Horse	MODERN SPECIES	25	LMOD2 (ENSECAG00000057098)	ASB15 (ENSECAG00000011379)	IQUB (ENSECAG00000005249)	SLC13A1 (ENSECAG00000020615) #7	CADPS2 (ENSECAG00000024021) #8	FEZF1 (ENSECAG00000022989) #10	AASS (ENSECAG00000021479) #11	PTPRZ1 (ENSECAG00000011293) #12	WNT16 (ENSECAG00000006880) #15	FAM3C (ENSECAG00000008527) #14	CPED1 (ENSECAG00000017094) #16	ING3 (ENSECAG00000008147)	TSPAN12 (ENSECAG00000001545) #18	KCND2 (ENSECAG00000002703) #19	LSM8 (ENSECAG00000024025) #21	CTTNBP2 (ENSECAG00000025076) #22	CFTR (ENSECAG00000009139) #23	ASZ1 (ENSECAG00000011002) #24	ENSECAG00000043879	WNT2 (ENSECAG00000024641) #25	ENSECAG00000059035	ST7 (ENSECAG00000008375) #26	CAPZA2 (ENSECAG00000021693) #27	MET (ENSECAG00000010385) #28	CAV1 (ENSECAG00000009134) #29	CAV2 (ENSECAG00000037857) #30	TES (ENSECAG00000016917) #31	TFEC (ENSECAG00000013937) #33	MDFIC (ENSECAG00000013772) #34	FOXP2 (ENSECAG00000023867) #35	PPP1R3A (ENSECAG00000023243) #36
Donkey	MODERN SPECIES		SLC13A1 (ENSEASG00005009316) #7	TAS2R16 (ENSEASG00005009304)	CADPS2 (ENSEASG00005009041) #8	FEZF1 (ENSEASG00005009026) #10	AASS (ENSEASG00005009016) #11	PTPRZ1 (ENSEASG00005008993) #12	FAM3C (ENSEASG00005008980) #14	WNT16 (ENSEASG00005008977) #15	ENSEASG00005008958 #16	ENSEASG00005028595 #16	ING3 (ENSEASG00005008942)	TSPAN12 (ENSEASG00005008941) #18	KCND2 (ENSEASG00005008938) #19	ENSEASG00005008937 #20	LSM8 (ENSEASG00005027658) #21	CTTNBP2 (ENSEASG00005008929) #22	CFTR (ENSEASG00005008909) #23	ASZ1 (ENSEASG00005008894) #24	WNT2 (ENSEASG00005008889) #25	ST7 (ENSEASG00005008859) #26	CAPZA2 (ENSEASG00005008845) #27	MET (ENSEASG00005008840) #28	CAV1 (ENSEASG00005030696) #29	ENSEASG00005034179 #30	TES (ENSEASG00005008832) #31	TFEC (ENSEASG00005036487) #33	MDFIC (ENSEASG00005025429) #34	FOXP2 (ENSEASG00005008813) #35	PPP1R3A (ENSEASG00005008800) #36	SMIM30 (ENSEASG00005004307)	GPR85 (ENSEASG00005031028) #37
Chiroptera	ANCESTRAL SPECIES	41	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Microchiroptera	ANCESTRAL SPECIES	23	ENSGT00590000083094.a.b #8	ENSGT00940000163382 #9	ENSGT00940000163928	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT01020000230614 #20	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1230												ENSMLUG00000030553	ENSMLUG00000016140	ENSMLUG00000006837 #21	ENSMLUG00000025631	ENSMLUG00000005598 #22	ENSMLUG00000027669 #22	ENSMLUG00000029285	ENSMLUG00000012244 #23	ENSMLUG00000010218
Microbat	MODERN SPECIES	1230											ENSMLUG00000030553	ENSMLUG00000016140	ENSMLUG00000006837 #21	ENSMLUG00000025631	ENSMLUG00000005598 #22	ENSMLUG00000027669 #22	ENSMLUG00000029285	ENSMLUG00000012244 #23	ENSMLUG00000010218
Greater horseshoe bat	MODERN SPECIES	18	CADPS2 (ENSRFEG00010015967) #8	RNF133 (ENSRFEG00010016316)	FEZF1 (ENSRFEG00010016383) #10	AASS (ENSRFEG00010016545) #11	PTPRZ1 (ENSRFEG00010016626) #12	FAM3C (ENSRFEG00010016879) #14	WNT16 (ENSRFEG00010016926) #15	CPED1 (ENSRFEG00010016992) #16	ING3 (ENSRFEG00010017054)	TSPAN12 (ENSRFEG00010017208) #18	KCND2 (ENSRFEG00010017250) #19	ENSRFEG00010017340 #20	ENSRFEG00010017356	ENSRFEG00010017376	ENSRFEG00010017515 #21	CTTNBP2 (ENSRFEG00010017601) #22	CFTR (ENSRFEG00010017672) #23	ENSRFEG00010018517	ASZ1 (ENSRFEG00010018560) #24	WNT2 (ENSRFEG00010018681) #25	ST7 (ENSRFEG00010018747) #26	CAPZA2 (ENSRFEG00010019032) #27	MET (ENSRFEG00010019152) #28	CAV1 (ENSRFEG00010019224) #29	CAV2 (ENSRFEG00010019273) #30	TES (ENSRFEG00010019300) #31	ENSRFEG00010019318	TFEC (ENSRFEG00010019376) #33	MDFIC (ENSRFEG00010019544) #34	FOXP2 (ENSRFEG00010019612) #35	PPP1R3A (ENSRFEG00010019863) #36
Megabat	MODERN SPECIES	3650														ENSPVAG00000000992	LSM8 (ENSPVAG00000000990) #21	CTTNBP2 (ENSPVAG00000000989) #22	CFTR (ENSPVAG00000000987) #23
Eulipotyphla	ANCESTRAL SPECIES	1454																ENSGT00940000158293 #22	ENSGT00940000158567 #23
Common shrew	MODERN SPECIES	2000																CTTNBP2 (ENSSARG00000012137) #22	ENSSARG00000012135	CFTR (ENSSARG00000012121) #23
Hedgehog	MODERN SPECIES	8067																CTTNBP2 (ENSEEUG00000001204) #22
Atlantogenata	ANCESTRAL SPECIES	7	ENSGT00390000008099	ENSGT00390000014326	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Afrotheria	ANCESTRAL SPECIES	5	ENSGT00390000008099	ENSGT00390000014326	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Afrotheria_a	ANCESTRAL SPECIES	5	ENSGT00390000008099	ENSGT00390000014326	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Elephant	MODERN SPECIES	428	IQUB (ENSLAFG00000002619)	SLC13A1 (ENSLAFG00000005670) #7	CADPS2 (ENSLAFG00000013553) #8	FEZF1 (ENSLAFG00000013550) #10	AASS (ENSLAFG00000004573) #11	PTPRZ1 (ENSLAFG00000004565) #12	FAM3C (ENSLAFG00000010029) #14	WNT16 (ENSLAFG00000010025) #15	ENSLAFG00000005279 #16	ENSLAFG00000032200 #16	ING3 (ENSLAFG00000030488)	TSPAN12 (ENSLAFG00000004689) #18	KCND2 (ENSLAFG00000008593) #19	ENSLAFG00000011244	LSM8 (ENSLAFG00000011242) #21	CTTNBP2 (ENSLAFG00000005761) #22	CFTR (ENSLAFG00000005753) #23	ASZ1 (ENSLAFG00000005746) #24	WNT2 (ENSLAFG00000022699) #25	ST7 (ENSLAFG00000016129) #26	CAPZA2 (ENSLAFG00000007766) #27	MET (ENSLAFG00000011703) #28	CAV1 (ENSLAFG00000028864) #29	CAV2 (ENSLAFG00000015065) #30	TES (ENSLAFG00000017268) #31	ENSLAFG00000031865 #33	ENSLAFG00000017267 #33	MDFIC (ENSLAFG00000013504) #34	FOXP2 (ENSLAFG00000012661) #35	PPP1R3A (ENSLAFG00000009257) #36	GPR85 (ENSLAFG00000012553) #37
Hyrax	MODERN SPECIES	7009																CTTNBP2 (ENSPCAG00000001332) #22
Tenrec	MODERN SPECIES	7445																CTTNBP2 (ENSETEG00000016438) #22
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000158293 #22
Sloth	MODERN SPECIES	7511																CTTNBP2 (ENSCHOG00000011981) #22
Armadillo	MODERN SPECIES	4550												ENSDNOG00000040318	LSM8 (ENSDNOG00000034613) #21	ENSDNOG00000037877	ENSDNOG00000005117	CTTNBP2 (ENSDNOG00000001656) #22
Marsupialia	ANCESTRAL SPECIES	4	ENSGT00940000163928	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000161777.b	ENSGT00940000153661.b	ENSGT00940000161777.a	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Marsupialia_b	ANCESTRAL SPECIES	12											ENSGT00940000161777.b	ENSGT00940000153661.b.e.b	ENSGT00940000161777.a.i.a	ENSGT00940000153661.b.f	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b.c #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Diprotodontia	ANCESTRAL SPECIES	16											ENSGT00940000161777.b	ENSGT00940000153661.b.e.b	ENSGT00940000161777.a.i.a	ENSGT00940000153661.b.f	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b.c #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Diprotodontia_a	ANCESTRAL SPECIES	18											ENSGT00940000161777.b	ENSGT00940000153661.b.e.b.c	ENSGT00940000161777.a.i.a	ENSGT00940000153661.b.f	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b.c #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00950000182989.D.a.b.i.b	ENSGT00890000139436.B #37
koala	MODERN SPECIES	281								ENSPCIG00000021444	ENSPCIG00000036743	ENSPCIG00000021445	ENSPCIG00000021455	ENSPCIG00000033667	ENSPCIG00000021456	ENSPCIG00000021462	LSM8 (ENSPCIG00000021467) #21	CTTNBP2 (ENSPCIG00000006837) #22	CFTR (ENSPCIG00000005433) #23	ASZ1 (ENSPCIG00000005288) #24	WNT2 (ENSPCIG00000005279) #25	ENSPCIG00000005245 #26
Common wonbat	MODERN SPECIES	1132													ENSVURG00010020323	LSM8 (ENSVURG00010020298) #21	ENSVURG00010020288	CTTNBP2 (ENSVURG00010020262) #22	CFTR (ENSVURG00010020201) #23	ASZ1 (ENSVURG00010020160) #24	WNT2 (ENSVURG00010020146) #25	ST7 (ENSVURG00010020104) #26	ENSVURG00010020091	CAPZA2 (ENSVURG00010020077) #27	ENSVURG00010020064	ENSVURG00010020061	ENSVURG00010020055	MET (ENSVURG00010020038) #28	CAV1 (ENSVURG00010020024) #29	CAV2 (ENSVURG00010020019) #30	TES (ENSVURG00010020012) #31	TFEC (ENSVURG00010019984) #33
Tasmanian devil	MODERN SPECIES	4	RNF133 (ENSSHAG00000008983)	CADPS2 (ENSSHAG00000002469) #8	FEZF1 (ENSSHAG00000001391) #10	AASS (ENSSHAG00000017254) #11	PTPRZ1 (ENSSHAG00000016799) #12	ENSSHAG00000015103 #14	WNT16 (ENSSHAG00000027699) #15	CPED1 (ENSSHAG00000013416) #16	ING3 (ENSSHAG00000013063)	TSPAN12 (ENSSHAG00000012139) #18	KCND2 (ENSSHAG00000007231) #19	ENSSHAG00000018547	ENSSHAG00000026856	ENSSHAG00000018617	LSM8 (ENSSHAG00000023318) #21	CTTNBP2 (ENSSHAG00000017847) #22	CFTR (ENSSHAG00000030052) #23	ASZ1 (ENSSHAG00000017307) #24	WNT2 (ENSSHAG00000017186) #25	ST7 (ENSSHAG00000016896) #26	CAPZA2 (ENSSHAG00000022040) #27	MET (ENSSHAG00000015881) #28	CAV1 (ENSSHAG00000030626) #29	ENSSHAG00000020716 #30	TES (ENSSHAG00000013689) #31	TFEC (ENSSHAG00000012198) #33	ENSSHAG00000010737	MDFIC (ENSSHAG00000018830) #34	FOXP2 (ENSSHAG00000018566) #35	PPP1R3A (ENSSHAG00000017954) #36	GPR85 (ENSSHAG00000029175) #37
Opossum	MODERN SPECIES	7	ENSMODG00000039477	ENSMODG00000015486 #16	ING3 (ENSMODG00000015490)	TSPAN12 (ENSMODG00000015495) #18	KCND2 (ENSMODG00000024535) #19	ENSMODG00000043163	ENSMODG00000044091	ENSMODG00000015504	ENSMODG00000015511	ENSMODG00000042953	ENSMODG00000024541	ENSMODG00000015525	ENSMODG00000027321	ENSMODG00000015735	LSM8 (ENSMODG00000015729) #21	CTTNBP2 (ENSMODG00000015754) #22	CFTR (ENSMODG00000015771) #23	ASZ1 (ENSMODG00000015784) #24	WNT2 (ENSMODG00000015792) #25	ST7 (ENSMODG00000015806) #26	CAPZA2 (ENSMODG00000041408) #27	MET (ENSMODG00000015822) #28	CAV1 (ENSMODG00000015826) #29	CAV2 (ENSMODG00000047495) #30	TES (ENSMODG00000015840) #31	ENSMODG00000015845 #33	ENSMODG00000045482	ENSMODG00000038037	MDFIC (ENSMODG00000015856) #34	ENSMODG00000046094	FOXP2 (ENSMODG00000015863) #35
Platypus	MODERN SPECIES	1	ENSOANG00000039363 #9	RNF133 (ENSOANG00000015935)	CADPS2 (ENSOANG00000004823) #8	FEZF1 (ENSOANG00000041502) #10	AASS (ENSOANG00000004822) #11	PTPRZ1 (ENSOANG00000004821) #12	FAM3C (ENSOANG00000051321) #14	WNT16 (ENSOANG00000005655) #15	CPED1 (ENSOANG00000005654) #16	ING3 (ENSOANG00000043175)	TSPAN12 (ENSOANG00000049624) #18	ENSOANG00000039010 #19	ENSOANG00000011984	ENSOANG00000008771	LSM8 (ENSOANG00000049504) #21	CTTNBP2 (ENSOANG00000021090) #22	CFTR (ENSOANG00000008767) #23	ASZ1 (ENSOANG00000031342) #24	WNT2 (ENSOANG00000008766) #25	ST7 (ENSOANG00000008765) #26	CAPZA2 (ENSOANG00000038071) #27	MET (ENSOANG00000015031) #28	CAV1 (ENSOANG00000048557) #29	ENSOANG00000036116 #30	TES (ENSOANG00000014092) #31	TFEC (ENSOANG00000014094) #33	MDFIC (ENSOANG00000044059) #34	FOXP2 (ENSOANG00000001697) #35	ENSOANG00000041865	ENSOANG00000001554 #36	SMIM30 (ENSOANG00000037282)
Sauria	ANCESTRAL SPECIES	4	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00720000108868	ENSGT00940000157503	ENSGT00940000154102.b	ENSGT00390000008631.b	ENSGT00940000155657	ENSGT00390000015154	ENSGT00940000158528	ENSGT00940000153629.a.b	ENSGT00940000159912	ENSGT00530000063540.a	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT01030000238252	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36
Archelosauria	ANCESTRAL SPECIES	3	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00940000163382.a #9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00720000108868	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT01030000238252	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00960000189792	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT01000000221197	ENSGT00940000158685 #34	ENSGT00940000155480 #35
Archosauria	ANCESTRAL SPECIES	4	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00940000163382.a #9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT01030000238252	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00960000189792	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT01000000221197	ENSGT00940000158685 #34	ENSGT00940000155480 #35
Aves	ANCESTRAL SPECIES	1	ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982.sd.a	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT01030000238252	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00960000189792	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634
Neognathae	ANCESTRAL SPECIES	3	ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982.sd.a	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00960000189792	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982.sd.a	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36	ENSGT00400000023684
Neognathae_c	ANCESTRAL SPECIES		ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216.l #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982.sd.a	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36	ENSGT00400000023684
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	20	AASS (ENSSHBG00005008699) #11	PTPRZ1 (ENSSHBG00005009048) #12	FAM3C (ENSSHBG00005009145) #14	ENSSHBG00005009160	WNT16 (ENSSHBG00005009190) #15	CPED1 (ENSSHBG00005009250) #16	ENSSHBG00005009264 #16	ING3 (ENSSHBG00005009270)	TSPAN12 (ENSSHBG00005009282) #18	KCND2 (ENSSHBG00005009311) #19	ENSSHBG00005009339	ENSSHBG00005009348	ENSSHBG00005009388	LSM8 (ENSSHBG00005009461) #21	ENSSHBG00005009480 #22	ENSSHBG00005009496 #22	ENSSHBG00005009503	CFTR (ENSSHBG00005009547) #23	ASZ1 (ENSSHBG00005009632) #24	WNT2 (ENSSHBG00005009667) #25	ST7 (ENSSHBG00005009717) #26	CAPZA2 (ENSSHBG00005009748) #27	MET (ENSSHBG00005009888) #28	CAV1 (ENSSHBG00005010735) #29	CAV2 (ENSSHBG00005010753) #30	TES (ENSSHBG00005010796) #31	TFEC (ENSSHBG00005010824) #33	MDFIC (ENSSHBG00005010864) #34	FOXP2 (ENSSHBG00005010906) #35	ENSSHBG00005010949 #35	ENSSHBG00005010981
Kakapo	MODERN SPECIES	20	FEZF1 (ENSSHBG00005008618) #10	AASS (ENSSHBG00005008699) #11	PTPRZ1 (ENSSHBG00005009048) #12	FAM3C (ENSSHBG00005009145) #14	ENSSHBG00005009160	WNT16 (ENSSHBG00005009190) #15	CPED1 (ENSSHBG00005009250) #16	ENSSHBG00005009264 #16	ING3 (ENSSHBG00005009270)	TSPAN12 (ENSSHBG00005009282) #18	KCND2 (ENSSHBG00005009311) #19	ENSSHBG00005009339	ENSSHBG00005009348	ENSSHBG00005009388	LSM8 (ENSSHBG00005009461) #21	ENSSHBG00005009480 #22	ENSSHBG00005009496 #22	ENSSHBG00005009503	CFTR (ENSSHBG00005009547) #23	ASZ1 (ENSSHBG00005009632) #24	WNT2 (ENSSHBG00005009667) #25	ST7 (ENSSHBG00005009717) #26	CAPZA2 (ENSSHBG00005009748) #27	MET (ENSSHBG00005009888) #28	CAV1 (ENSSHBG00005010735) #29	CAV2 (ENSSHBG00005010753) #30	TES (ENSSHBG00005010796) #31	TFEC (ENSSHBG00005010824) #33	MDFIC (ENSSHBG00005010864) #34	FOXP2 (ENSSHBG00005010906) #35	ENSSHBG00005010949 #35
Golden eagle	MODERN SPECIES	21	ENSACCG00020012332 #7	CADPS2 (ENSACCG00020012430) #8	FEZF1 (ENSACCG00020012596) #10	AASS (ENSACCG00020012632) #11	PTPRZ1 (ENSACCG00020012691) #12	ENSACCG00020012828	FAM3C (ENSACCG00020012884) #14	WNT16 (ENSACCG00020012907) #15	CPED1 (ENSACCG00020012968) #16	ING3 (ENSACCG00020013015)	TSPAN12 (ENSACCG00020013048) #18	KCND2 (ENSACCG00020013078) #19	ENSACCG00020013093	ENSACCG00020013129	LSM8 (ENSACCG00020013148) #21	CTTNBP2 (ENSACCG00020013195) #22	CFTR (ENSACCG00020013240) #23	ENSACCG00020013258 #24	WNT2 (ENSACCG00020013296) #25	ST7 (ENSACCG00020013343) #26	CAPZA2 (ENSACCG00020013367) #27	MET (ENSACCG00020013383) #28	CAV1 (ENSACCG00020013402) #29	CAV2 (ENSACCG00020013411) #30	TES (ENSACCG00020013418) #31	ENSACCG00020013448	TFEC (ENSACCG00020013475) #33	MDFIC (ENSACCG00020013495) #34	FOXP2 (ENSACCG00020013527) #35	ENSACCG00020013550 #35	ENSACCG00020013563
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982.sd.a	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993.a.b #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36	ENSGT01040000241896
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982.sd.a	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993.a.b #31	ENSGT00940000155993.a.a #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982.sd.a	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993.a.b #31	ENSGT00940000155993.a.a #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36
Medium ground finch	MODERN SPECIES	27	NDUFA5 (ENSGFOG00000013262)	IQUB (ENSGFOG00000013261)	ENSGFOG00000013259	SLC13A1 (ENSGFOG00000012916) #7	CADPS2 (ENSGFOG00000012153) #8	FEZF1 (ENSGFOG00000012083) #10	AASS (ENSGFOG00000012070) #11	PTPRZ1 (ENSGFOG00000012035) #12	FAM3C (ENSGFOG00000012026) #14	WNT16 (ENSGFOG00000012022) #15	CPED1 (ENSGFOG00000011981) #16	ING3 (ENSGFOG00000011963)	TSPAN12 (ENSGFOG00000011959) #18	ENSGFOG00000011895	LSM8 (ENSGFOG00000011878) #21	CTTNBP2 (ENSGFOG00000011589) #22	CFTR (ENSGFOG00000009036) #23	WNT2 (ENSGFOG00000008973) #25	ST7 (ENSGFOG00000008942) #26	CAPZA2 (ENSGFOG00000008927) #27	MET (ENSGFOG00000008894) #28	CAV1 (ENSGFOG00000008885) #29	CAV2 (ENSGFOG00000008881) #30	ENSGFOG00000008873 #31	ENSGFOG00000008870 #31	TFEC (ENSGFOG00000008861) #33	MDFIC (ENSGFOG00000008858) #34	FOXP2 (ENSGFOG00000008787) #35
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982.sd.a	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993.a.b #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37
Zebra finch	MODERN SPECIES	11	ENSTGUG00000004331	ENSTGUG00000004340	SLC13A1 (ENSTGUG00000004349) #7	CADPS2 (ENSTGUG00000004403) #8	FEZF1 (ENSTGUG00000004488) #10	AASS (ENSTGUG00000004496) #11	PTPRZ1 (ENSTGUG00000004543) #12	FAM3C (ENSTGUG00000004613) #14	WNT16 (ENSTGUG00000025350) #15	CPED1 (ENSTGUG00000004646) #16	ING3 (ENSTGUG00000004655)	TSPAN12 (ENSTGUG00000004668) #18	KCND2 (ENSTGUG00000004691) #19	ENSTGUG00000019694	LSM8 (ENSTGUG00000028972) #21	CTTNBP2 (ENSTGUG00000004732) #22	CFTR (ENSTGUG00000004828) #23	ASZ1 (ENSTGUG00000004962) #24	WNT2 (ENSTGUG00000005016) #25	ENSTGUG00000024421	ST7 (ENSTGUG00000005050) #26	CAPZA2 (ENSTGUG00000021964) #27	MET (ENSTGUG00000005136) #28	CAV1 (ENSTGUG00000021482) #29	CAV2 (ENSTGUG00000028946) #30	TES (ENSTGUG00000005272) #31	TFEC (ENSTGUG00000025154) #33	MDFIC (ENSTGUG00000005311) #34	FoxP2 (ENSTGUG00000005315) #35	ENSTGUG00000019142	PPP1R3A (ENSTGUG00000022324) #36
Common canary	MODERN SPECIES	6	ENSSCAG00000003656	SLC13A1 (ENSSCAG00000003643) #7	CADPS2 (ENSSCAG00000001348) #8	FEZF1 (ENSSCAG00000000429) #10	AASS (ENSSCAG00000000401) #11	PTPRZ1 (ENSSCAG00000000336) #12	FAM3C (ENSSCAG00000000301) #14	WNT16 (ENSSCAG00000000288) #15	CPED1 (ENSSCAG00000000269) #16	ING3 (ENSSCAG00000000233)	TSPAN12 (ENSSCAG00000000213) #18	KCND2 (ENSSCAG00000000182) #19	ENSSCAG00000000133	ENSSCAG00000000121	LSM8 (ENSSCAG00000000112) #21	CTTNBP2 (ENSSCAG00000010165) #22	CFTR (ENSSCAG00000009670) #23	ENSSCAG00000009534 #24	WNT2 (ENSSCAG00000009523) #25	ST7 (ENSSCAG00000009507) #26	CAPZA2 (ENSSCAG00000009492) #27	MET (ENSSCAG00000009475) #28	CAV1 (ENSSCAG00000009469) #29	CAV2 (ENSSCAG00000009464) #30	TES (ENSSCAG00000009450) #31	TFEC (ENSSCAG00000009440) #33	MDFIC (ENSSCAG00000009429) #34	FOXP2 (ENSSCAG00000009355) #35	ENSSCAG00000009306	PPP1R3A (ENSSCAG00000009300) #36	GPR85 (ENSSCAG00000009290) #37
Flycatcher	MODERN SPECIES	10	SLC13A1 (ENSFALG00000009911) #7	CADPS2 (ENSFALG00000009915) #8	FEZF1 (ENSFALG00000009923) #10	AASS (ENSFALG00000009936) #11	PTPRZ1 (ENSFALG00000009943) #12	FAM3C (ENSFALG00000028842) #14	WNT16 (ENSFALG00000025164) #15	CPED1 (ENSFALG00000009963) #16	ING3 (ENSFALG00000009971)	TSPAN12 (ENSFALG00000009987) #18	KCND2 (ENSFALG00000010001) #19	ENSFALG00000026847	ENSFALG00000028483	ENSFALG00000025919	LSM8 (ENSFALG00000023574) #21	CTTNBP2 (ENSFALG00000010036) #22	CFTR (ENSFALG00000010051) #23	ASZ1 (ENSFALG00000010054) #24	WNT2 (ENSFALG00000024891) #25	ST7 (ENSFALG00000010057) #26	CAPZA2 (ENSFALG00000025088) #27	MET (ENSFALG00000010094) #28	CAV1 (ENSFALG00000010117) #29	CAV2 (ENSFALG00000027178) #30	TES (ENSFALG00000010124) #31	TFEC (ENSFALG00000025375) #33	ENSFALG00000010139 #34	FOXP2 (ENSFALG00000024389) #35	ENSFALG00000027247	PPP1R3A (ENSFALG00000009525) #36	ENSFALG00000025860
Great tit	MODERN SPECIES	10	ENSPMJG00000009956	SLC13A1 (ENSPMJG00000010001) #7	CADPS2 (ENSPMJG00000010030) #8	FEZF1 (ENSPMJG00000010035) #10	AASS (ENSPMJG00000010036) #11	PTPRZ1 (ENSPMJG00000010040) #12	FAM3C (ENSPMJG00000010041) #14	WNT16 (ENSPMJG00000010042) #15	CPED1 (ENSPMJG00000010048) #16	ING3 (ENSPMJG00000010056)	TSPAN12 (ENSPMJG00000010063) #18	ENSPMJG00000010076 #19	ENSPMJG00000010089	ENSPMJG00000010120	LSM8 (ENSPMJG00000010122) #21	CTTNBP2 (ENSPMJG00000010132) #22	CFTR (ENSPMJG00000010133) #23	ASZ1 (ENSPMJG00000010138) #24	WNT2 (ENSPMJG00000010142) #25	ST7 (ENSPMJG00000010160) #26	CAPZA2 (ENSPMJG00000010167) #27	MET (ENSPMJG00000010222) #28	CAV1 (ENSPMJG00000010227) #29	CAV2 (ENSPMJG00000010228) #30	TES (ENSPMJG00000010232) #31	TFEC (ENSPMJG00000010298) #33	MDFIC (ENSPMJG00000010365) #34	FOXP2 (ENSPMJG00000010367) #35	ENSPMJG00000010571 #35	PPP1R3A (ENSPMJG00000010574) #36	ENSPMJG00000010575
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982.sd.a	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00960000189792	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36
Anatidae	ANCESTRAL SPECIES	14														ENSGT00940000163982.sd.a	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00940000166634	ENSGT01040000241896
Pink-footed goose	MODERN SPECIES	26															LSM8 (ENSABRG00000006189) #21	CTTNBP2 (ENSABRG00000006157) #22	CFTR (ENSABRG00000006122) #23	ASZ1 (ENSABRG00000006101) #24	WNT2 (ENSABRG00000006091) #25	ST7 (ENSABRG00000006054) #26	CAPZA2 (ENSABRG00000006030) #27	MET (ENSABRG00000005986) #28	CAV1 (ENSABRG00000005979) #29	CAV2 (ENSABRG00000005970) #30	TES (ENSABRG00000005946) #31	TFEC (ENSABRG00000005925) #33	MDFIC (ENSABRG00000005916) #34	FOXP2 (ENSABRG00000005866) #35	ENSABRG00000005855 #35	ENSABRG00000005840	PPP1R3A (ENSABRG00000005835) #36
Duck	MODERN SPECIES		ENSAPLG00000031194 #8	FEZF1 (ENSAPLG00000015055) #10	AASS (ENSAPLG00000015230) #11	PTPRZ1 (ENSAPLG00000015904) #12	FAM3C (ENSAPLG00000016245) #14	WNT16 (ENSAPLG00000030369) #15	CPED1 (ENSAPLG00000000584) #16	ING3 (ENSAPLG00000002016)	TSPAN12 (ENSAPLG00000002596) #18	ENSAPLG00000021328	ENSAPLG00000031003 #19	ENSAPLG00000017686	ENSAPLG00000027810	LSM8 (ENSAPLG00000005115) #21	ENSAPLG00000004753	CTTNBP2 (ENSAPLG00000010400) #22	CFTR (ENSAPLG00000011156) #23	ENSAPLG00000029683	WNT2 (ENSAPLG00000003242) #25	ST7 (ENSAPLG00000010396) #26	CAPZA2 (ENSAPLG00000021156) #27	MET (ENSAPLG00000010894) #28	CAV1 (ENSAPLG00000001978) #29	CAV2 (ENSAPLG00000026342) #30	TES (ENSAPLG00000012062) #31	TFEC (ENSAPLG00000012143) #33	MDFIC (ENSAPLG00000012299) #34	FOXP2 (ENSAPLG00000012306) #35	ENSAPLG00000016789 #35	PPP1R3A (ENSAPLG00000029187) #36	ENSAPLG00000017927
Phasianidae	ANCESTRAL SPECIES		ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982.sd.a	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00960000189792	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36
Phasianidae_b	ANCESTRAL SPECIES	9	ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982.sd.a	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00960000189792	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36
Chicken	MODERN SPECIES		SLC13A1 (ENSGALG00010001714) #7	CADPS2 (ENSGALG00010001745) #8	FEZF1 (ENSGALG00010001917) #10	ENSGALG00010001236	AASS (ENSGALG00010001234) #11	PTPRZ1 (ENSGALG00010001248) #12	FAM3C (ENSGALG00010001264) #14	WNT16 (ENSGALG00010001305) #15	CPED1 (ENSGALG00010001320) #16	ING3 (ENSGALG00010001349)	TSPAN12 (ENSGALG00010001232) #18	KCND2 (ENSGALG00010001419) #19	ENSGALG00010001421	ANKRD26 (ENSGALG00010001443)	LSM8 (ENSGALG00010001456) #21	CTTNBP2 (ENSGALG00010001200) #22	CFTR (ENSGALG00010001202) #23	ASZ1 (ENSGALG00010001207) #24	WNT2 (ENSGALG00010001486) #25	ST7 (ENSGALG00010002280) #26	ENSGALG00010001492	CAPZA2 (ENSGALG00010001501) #27	MET (ENSGALG00010001514) #28	CAV1 (ENSGALG00010002285) #29	CAV2 (ENSGALG00010001517) #30	TES (ENSGALG00010001214) #31	TFEC (ENSGALG00010001219) #33	MDFIC (ENSGALG00010001381) #34	FOXP2 (ENSGALG00010001407) #35	ENSGALG00010001519	PPP1R3A (ENSGALG00010001526) #36
Japanese quail	MODERN SPECIES		ASB15 (ENSCJPG00005012110)	LMOD2 (ENSCJPG00005012111)	WASL (ENSCJPG00005012112)	ENSCJPG00005012113	SPAM1 (ENSCJPG00005012116)	ENSCJPG00005012118	ENSCJPG00005012120	GPR37 (ENSCJPG00005012127)	POT1 (ENSCJPG00005012128)	ENSCJPG00005012137 #16	ENSCJPG00005012139 #16	ING3 (ENSCJPG00005012141)	TSPAN12 (ENSCJPG00005012142) #18	KCND2 (ENSCJPG00005012143) #19	LSM8 (ENSCJPG00005012150) #21	CTTNBP2 (ENSCJPG00005012154) #22	CFTR (ENSCJPG00005012155) #23	ASZ1 (ENSCJPG00005012161) #24	WNT2 (ENSCJPG00005012164) #25	ST7 (ENSCJPG00005012165) #26	CAPZA2 (ENSCJPG00005012167) #27	MET (ENSCJPG00005012168) #28	CAV1 (ENSCJPG00005012171) #29	CAV2 (ENSCJPG00005012172) #30	TES (ENSCJPG00005012177) #31	TFEC (ENSCJPG00005012178) #33	MDFIC (ENSCJPG00005012181) #34	FOXP2 (ENSCJPG00005012184) #35	ENSCJPG00005013359	PPP1R3A (ENSCJPG00005013360) #36	ENSCJPG00005013364
African ostrich	MODERN SPECIES	222														ENSSCUG00000004296	LSM8 (ENSSCUG00000004301) #21	CTTNBP2 (ENSSCUG00000004304) #22	CFTR (ENSSCUG00000004308) #23	ENSSCUG00000004311	ASZ1 (ENSSCUG00000004312) #24	WNT2 (ENSSCUG00000004314) #25	ST7 (ENSSCUG00000004335) #26	CAPZA2 (ENSSCUG00000004368) #27	MET (ENSSCUG00000004369) #28	CAV1 (ENSSCUG00000004371) #29	CAV2 (ENSSCUG00000004372) #30	ENSSCUG00000004375	TES (ENSSCUG00000004376) #31	TFEC (ENSSCUG00000004379) #33	MDFIC (ENSSCUG00000004382) #34	ENSSCUG00000004383	FOXP2 (ENSSCUG00000004384) #35
Australian saltwater crocodile	MODERN SPECIES	49	CADPS2 (ENSCPRG00005010813) #8	FEZF1 (ENSCPRG00005010783) #10	AASS (ENSCPRG00005010757) #11	PTPRZ1 (ENSCPRG00005010748) #12	ENSCPRG00005010728	FAM3C (ENSCPRG00005010721) #14	WNT16 (ENSCPRG00005010718) #15	CPED1 (ENSCPRG00005010685) #16	ING3 (ENSCPRG00005010662)	TSPAN12 (ENSCPRG00005010654) #18	KCND2 (ENSCPRG00005010626) #19	ENSCPRG00005010585	ENSCPRG00005010524	ENSCPRG00005010484	LSM8 (ENSCPRG00005010480) #21	CTTNBP2 (ENSCPRG00005010434) #22	CFTR (ENSCPRG00005010391) #23	ASZ1 (ENSCPRG00005010351) #24	WNT2 (ENSCPRG00005010348) #25	ST7 (ENSCPRG00005010327) #26	ENSCPRG00005010321	CAPZA2 (ENSCPRG00005010284) #27	MET (ENSCPRG00005010146) #28	CAV1 (ENSCPRG00005010126) #29	CAV2 (ENSCPRG00005010121) #30	TES (ENSCPRG00005010118) #31	TFEC (ENSCPRG00005010099) #33	ENSCPRG00005010086	MDFIC (ENSCPRG00005010050) #34	FOXP2 (ENSCPRG00005010026) #35	ENSCPRG00005009987
Cryptodira	ANCESTRAL SPECIES	11	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00940000163382.a #9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00720000108868	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00960000189792	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT01000000221197	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00940000163382.a #9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00720000108868	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00960000189792	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT01000000221197	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634
Emydidae	ANCESTRAL SPECIES	10	ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00940000163382.a #9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00400000023684	ENSGT00890000139436.B #37
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	7	FEZF1 (ENSCPBG00000008446) #10	AASS (ENSCPBG00000008417) #11	PTPRZ1 (ENSCPBG00000008360) #12	FAM3C (ENSCPBG00000008326) #14	WNT16 (ENSCPBG00000008323) #15	ENSCPBG00000008316 #16	ING3 (ENSCPBG00000008307)	TSPAN12 (ENSCPBG00000008296) #18	ENSCPBG00000008270	KCND2 (ENSCPBG00000008266) #19	ENSCPBG00000008257	ENSCPBG00000008248	ENSCPBG00000008183	LSM8 (ENSCPBG00000008154) #21	ENSCPBG00000008135 #22	ENSCPBG00000008123 #22	CFTR (ENSCPBG00000007379) #23	ASZ1 (ENSCPBG00000007263) #24	WNT2 (ENSCPBG00000007227) #25	ST7 (ENSCPBG00000007194) #26	CAPZA2 (ENSCPBG00000007179) #27	MET (ENSCPBG00000007168) #28	CAV1 (ENSCPBG00000007159) #29	CAV2 (ENSCPBG00000007156) #30	TES (ENSCPBG00000007139) #31	TFEC (ENSCPBG00000007125) #33	MDFIC (ENSCPBG00000007111) #34	FOXP2 (ENSCPBG00000007098) #35	PPP1R3A (ENSCPBG00000007087) #36	MYOM1 (ENSCPBG00000007000)	ENSCPBG00000006970
painted turtle	MODERN SPECIES	7	CADPS2 (ENSCPBG00000008933) #8	FEZF1 (ENSCPBG00000008446) #10	AASS (ENSCPBG00000008417) #11	PTPRZ1 (ENSCPBG00000008360) #12	FAM3C (ENSCPBG00000008326) #14	WNT16 (ENSCPBG00000008323) #15	ENSCPBG00000008316 #16	ING3 (ENSCPBG00000008307)	TSPAN12 (ENSCPBG00000008296) #18	ENSCPBG00000008270	KCND2 (ENSCPBG00000008266) #19	ENSCPBG00000008257	ENSCPBG00000008248	ENSCPBG00000008183	LSM8 (ENSCPBG00000008154) #21	ENSCPBG00000008135 #22	ENSCPBG00000008123 #22	CFTR (ENSCPBG00000007379) #23	ASZ1 (ENSCPBG00000007263) #24	WNT2 (ENSCPBG00000007227) #25	ST7 (ENSCPBG00000007194) #26	CAPZA2 (ENSCPBG00000007179) #27	MET (ENSCPBG00000007168) #28	CAV1 (ENSCPBG00000007159) #29	CAV2 (ENSCPBG00000007156) #30	TES (ENSCPBG00000007139) #31	TFEC (ENSCPBG00000007125) #33	MDFIC (ENSCPBG00000007111) #34	FOXP2 (ENSCPBG00000007098) #35	PPP1R3A (ENSCPBG00000007087) #36	MYOM1 (ENSCPBG00000007000)
Three-toed box turtle	MODERN SPECIES	28	ENSTMTG00000005746 #7	CADPS2 (ENSTMTG00000005774) #8	ENSTMTG00000005924	RNF148 (ENSTMTG00000005937) #9	FEZF1 (ENSTMTG00000005956) #10	AASS (ENSTMTG00000005973) #11	PTPRZ1 (ENSTMTG00000006041) #12	FAM3C (ENSTMTG00000006113) #14	WNT16 (ENSTMTG00000006146) #15	CPED1 (ENSTMTG00000006179) #16	ING3 (ENSTMTG00000006434)	TSPAN12 (ENSTMTG00000006457) #18	KCND2 (ENSTMTG00000006474) #19	ENSTMTG00000006488	ENSTMTG00000006508	CTTNBP2 (ENSTMTG00000006565) #22	CFTR (ENSTMTG00000006673) #23	ASZ1 (ENSTMTG00000007462) #24	WNT2 (ENSTMTG00000007579) #25	ST7 (ENSTMTG00000007597) #26	CAPZA2 (ENSTMTG00000007614) #27	MET (ENSTMTG00000007665) #28	CAV1 (ENSTMTG00000008094) #29	CAV2 (ENSTMTG00000008104) #30	TES (ENSTMTG00000008115) #31	TFEC (ENSTMTG00000008131) #33	MDFIC (ENSTMTG00000008157) #34	FOXP2 (ENSTMTG00000008222) #35	PPP1R3A (ENSTMTG00000008667) #36	SMIM30 (ENSTMTG00000008684)	GPR85 (ENSTMTG00000008694) #37
Testudinidae	ANCESTRAL SPECIES	12	ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00940000163382.a #9	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00960000189792	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT01000000221197	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634
Abingdon island giant tortoise	MODERN SPECIES	2266																CTTNBP2 (ENSCABG00000013384) #22	ENSCABG00000013383	CFTR (ENSCABG00000013379) #23	ASZ1 (ENSCABG00000013225) #24	WNT2 (ENSCABG00000013194) #25	ST7 (ENSCABG00000013144) #26	CAPZA2 (ENSCABG00000013133) #27	ENSCABG00000013131
Chinese turtle	MODERN SPECIES	1049	AASS (ENSPSIG00000008076) #11	PTPRZ1 (ENSPSIG00000007851) #12	FAM3C (ENSPSIG00000007088) #14	WNT16 (ENSPSIG00000007055) #15	CPED1 (ENSPSIG00000006819) #16	ING3 (ENSPSIG00000006786)	TSPAN12 (ENSPSIG00000006353) #18	ENSPSIG00000006333	ENSPSIG00000001347	KCND2 (ENSPSIG00000006329) #19	ENSPSIG00000001336	ENSPSIG00000017191	ENSPSIG00000017169	ENSPSIG00000017066	LSM8 (ENSPSIG00000017054) #21	CTTNBP2 (ENSPSIG00000017035) #22	CFTR (ENSPSIG00000016860) #23	ASZ1 (ENSPSIG00000016815) #24	WNT2 (ENSPSIG00000016584) #25	ST7 (ENSPSIG00000016187) #26	CAPZA2 (ENSPSIG00000016176) #27	MET (ENSPSIG00000015326) #28	CAV2 (ENSPSIG00000015283) #30	TES (ENSPSIG00000015274) #31	TFEC (ENSPSIG00000015144) #33	ENSPSIG00000001329	MDFIC (ENSPSIG00000015133) #34	FOXP2 (ENSPSIG00000013338) #35	ENSPSIG00000001319	ENSPSIG00000001315	ENSPSIG00000001303
Lepidosauria	ANCESTRAL SPECIES	31	ENSGT00590000083094.a.b #8	ENSGT00940000163382.b #9	ENSGT00990000210432	ENSGT00940000163382.a #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT01030000238252	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000166634	ENSGT00940000157682.B #36
Episquamata	ANCESTRAL SPECIES	3	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000163382.b #9	ENSGT00990000210432	ENSGT00940000163382.a #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000153661	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT01030000238252	ENSGT00880000138051.a #24	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00590000083094.a.b #8	ENSGT00940000163382.b #9	ENSGT00940000163382.a #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216.b #16	ENSGT00390000015216.a #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT01030000238252	ENSGT00880000138051.a #24	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Lizard	DUPLICATION
Lizard	MODERN SPECIES	4	MOV10L1 (ENSACAG00000002357)	MLC1 (ENSACAG00000002373)	ENSACAG00000044040	CPED1 (ENSACAG00000007000) #16	ING3 (ENSACAG00000007047)	ENSACAG00000007094	TSPAN12 (ENSACAG00000007124) #18	KCND2 (ENSACAG00000007207) #19	ENSACAG00000007208	ENSACAG00000041568 #21	ENSACAG00000007246	ENSACAG00000037922 #21	ENSACAG00000039034	ENSACAG00000007252 #22	ENSACAG00000040576	ENSACAG00000037108 #22	ENSACAG00000035958	ENSACAG00000037242	ENSACAG00000039700	CFTR (ENSACAG00000007652) #23	ASZ1 (ENSACAG00000008056) #24	ST7 (ENSACAG00000008154) #26	CAPZA2 (ENSACAG00000008196) #27	MET (ENSACAG00000008309) #28	CAV1 (ENSACAG00000006576) #29	CAV2 (ENSACAG00000043538) #30	TES (ENSACAG00000006611) #31	ENSACAG00000035611	ENSACAG00000009975	TFEC (ENSACAG00000036278) #33	ENSACAG00000044299
Lizard	MODERN SPECIES	4	ENSACAG00000027919	PANX2 (ENSACAG00000002347)	MOV10L1 (ENSACAG00000002357)	MLC1 (ENSACAG00000002373)	ENSACAG00000044040	CPED1 (ENSACAG00000007000) #16	ING3 (ENSACAG00000007047)	ENSACAG00000007094	TSPAN12 (ENSACAG00000007124) #18	KCND2 (ENSACAG00000007207) #19	ENSACAG00000007208	ENSACAG00000041568 #21	ENSACAG00000007246	ENSACAG00000037922 #21	ENSACAG00000039034	ENSACAG00000007252 #22	ENSACAG00000040576	ENSACAG00000037108 #22	ENSACAG00000035958	ENSACAG00000037242	ENSACAG00000039700	CFTR (ENSACAG00000007652) #23	ASZ1 (ENSACAG00000008056) #24	ST7 (ENSACAG00000008154) #26	CAPZA2 (ENSACAG00000008196) #27	MET (ENSACAG00000008309) #28	CAV1 (ENSACAG00000006576) #29	CAV2 (ENSACAG00000043538) #30	TES (ENSACAG00000006611) #31	ENSACAG00000035611	ENSACAG00000009975
Elapidae	ANCESTRAL SPECIES	6	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216.b #16	ENSGT01000000221730	ENSGT00390000015216.a #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000153661	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT01010000230279	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Indian cobra	MODERN SPECIES	10	ENSNNAG00000006263	ENSNNAG00000006281 #9	FEZF1 (ENSNNAG00000006291) #10	AASS (ENSNNAG00000006311) #11	PTPRZ1 (ENSNNAG00000006362) #12	FAM3C (ENSNNAG00000006396) #14	WNT16 (ENSNNAG00000006418) #15	ENSNNAG00000006451 #16	ENSNNAG00000006479	ING3 (ENSNNAG00000006488)	TSPAN12 (ENSNNAG00000006500) #18	KCND2 (ENSNNAG00000006526) #19	ENSNNAG00000006538	ENSNNAG00000006556	LSM8 (ENSNNAG00000006583) #21	CTTNBP2 (ENSNNAG00000006600) #22	CFTR (ENSNNAG00000006666) #23	ASZ1 (ENSNNAG00000006732) #24	ST7 (ENSNNAG00000006862) #26	CAPZA2 (ENSNNAG00000007317) #27	ENSNNAG00000007327 #28	ENSNNAG00000007335 #28	ENSNNAG00000007381 #28	CAV1 (ENSNNAG00000007947) #29	CAV2 (ENSNNAG00000007961) #30	TES (ENSNNAG00000007976) #31	ENSNNAG00000008019	TFEC (ENSNNAG00000008043) #33	ENSNNAG00000008092	MDFIC (ENSNNAG00000008115) #34	FOXP2 (ENSNNAG00000008175) #35
Elapidae_a	ANCESTRAL SPECIES	61	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216.b #16	ENSGT01000000221730	ENSGT00390000015216.a #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00390000000873.a.b.a #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT01010000230279	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Acanthophiinae	ANCESTRAL SPECIES	57	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216.b #16	ENSGT01000000221730	ENSGT00390000015216.a #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00940000153661	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00390000000873.a.b.a #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT01010000230279	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382
Mainland tiger snake	MODERN SPECIES	26	ENSNSUG00000011827 #9	FEZF1 (ENSNSUG00000011831) #10	AASS (ENSNSUG00000011865) #11	PTPRZ1 (ENSNSUG00000012025) #12	FAM3C (ENSNSUG00000012026) #14	WNT16 (ENSNSUG00000012027) #15	CPED1 (ENSNSUG00000012028) #16	ENSNSUG00000012029	ING3 (ENSNSUG00000012030)	TSPAN12 (ENSNSUG00000012031) #18	KCND2 (ENSNSUG00000012032) #19	ENSNSUG00000012034	ENSNSUG00000012035	ENSNSUG00000012038	LSM8 (ENSNSUG00000012040) #21	CTTNBP2 (ENSNSUG00000012041) #22	CFTR (ENSNSUG00000012053) #23	ENSNSUG00000012057 #24	ST7 (ENSNSUG00000012058) #26	CAPZA2 (ENSNSUG00000012669) #27	MET (ENSNSUG00000012872) #28	CAV1 (ENSNSUG00000013163) #29	CAV2 (ENSNSUG00000013164) #30	TES (ENSNSUG00000013165) #31	ENSNSUG00000013166	TFEC (ENSNSUG00000013167) #33	MDFIC (ENSNSUG00000013168) #34	FOXP2 (ENSNSUG00000013169) #35	ENSNSUG00000013170 #36	GPR85 (ENSNSUG00000013171) #37	BMT2 (ENSNSUG00000013172)
Eastern brown snake	MODERN SPECIES	58						FAM3C (ENSPTXG00000010044) #14	WNT16 (ENSPTXG00000010045) #15	ENSPTXG00000010046 #16	ENSPTXG00000010047 #16	ING3 (ENSPTXG00000010048)	TSPAN12 (ENSPTXG00000010049) #18	ENSPTXG00000010050 #19	ENSPTXG00000010051	ENSPTXG00000010059	LSM8 (ENSPTXG00000010061) #21	CTTNBP2 (ENSPTXG00000010062) #22	CFTR (ENSPTXG00000010072) #23	ASZ1 (ENSPTXG00000010523) #24	ST7 (ENSPTXG00000010536) #26	CAPZA2 (ENSPTXG00000011530) #27	MET (ENSPTXG00000011531) #28	CAV1 (ENSPTXG00000011551) #29	TES (ENSPTXG00000011554) #31	ENSPTXG00000011556	MDFIC (ENSPTXG00000011560) #34	FOXP2 (ENSPTXG00000011565) #35	PPP1R3A (ENSPTXG00000011875) #36	GPR85 (ENSPTXG00000011876) #37	BMT2 (ENSPTXG00000011877)	TMEM168 (ENSPTXG00000011878)	IFRD1 (ENSPTXG00000011879)
Blue-lipped sea krait	MODERN SPECIES	1835																CTTNBP2 (ENSLLTG00000007155) #22
Laterata	ANCESTRAL SPECIES	6	ENSGT00390000008099	ENSGT00390000014326	ENSGT00940000166287	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00990000210432	ENSGT00940000163382.a #9	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT00890000139436.B #37	ENSGT00390000010382	ENSGT00390000005941
Common wall lizard	MODERN SPECIES	1	ENSPMRG00000013722	RNF148 (ENSPMRG00000013725) #9	FEZF1 (ENSPMRG00000013731) #10	AASS (ENSPMRG00000013742) #11	PTPRZ1 (ENSPMRG00000010174) #12	FAM3C (ENSPMRG00000010201) #14	WNT16 (ENSPMRG00000010203) #15	CPED1 (ENSPMRG00000010212) #16	ING3 (ENSPMRG00000010234)	TSPAN12 (ENSPMRG00000010270) #18	ENSPMRG00000010273	KCND2 (ENSPMRG00000010278) #19	ENSPMRG00000010282	ENSPMRG00000010321	ENSPMRG00000010327	CTTNBP2 (ENSPMRG00000010336) #22	CFTR (ENSPMRG00000010360) #23	ASZ1 (ENSPMRG00000010379) #24	ST7 (ENSPMRG00000010415) #26	CAPZA2 (ENSPMRG00000010465) #27	MET (ENSPMRG00000010518) #28	CAV1 (ENSPMRG00000010783) #29	CAV2 (ENSPMRG00000010787) #30	TES (ENSPMRG00000010792) #31	TFEC (ENSPMRG00000010811) #33	MDFIC (ENSPMRG00000010831) #34	FOXP2 (ENSPMRG00000010845) #35	PPP1R3A (ENSPMRG00000010867) #36	GPR85 (ENSPMRG00000010870) #37	BMT2 (ENSPMRG00000010873)	TMEM168 (ENSPMRG00000010878)
Argentine black and white tegu	MODERN SPECIES	15	IQUB (ENSSMRG00000012124)	ENSSMRG00000012131	ENSSMRG00000012149 #7	CADPS2 (ENSSMRG00000012230) #8	RNF148 (ENSSMRG00000012235) #9	FEZF1 (ENSSMRG00000012236) #10	AASS (ENSSMRG00000012237) #11	PTPRZ1 (ENSSMRG00000012253) #12	FAM3C (ENSSMRG00000012268) #14	WNT16 (ENSSMRG00000012269) #15	CPED1 (ENSSMRG00000012271) #16	ING3 (ENSSMRG00000012275)	TSPAN12 (ENSSMRG00000012286) #18	KCND2 (ENSSMRG00000012315) #19	ENSSMRG00000012339	CTTNBP2 (ENSSMRG00000012375) #22	CFTR (ENSSMRG00000012377) #23	ASZ1 (ENSSMRG00000012548) #24	ST7 (ENSSMRG00000012559) #26	CAPZA2 (ENSSMRG00000012563) #27	MET (ENSSMRG00000012570) #28	CAV1 (ENSSMRG00000012572) #29	CAV2 (ENSSMRG00000012573) #30	TES (ENSSMRG00000012594) #31	TFEC (ENSSMRG00000012616) #33	MDFIC (ENSSMRG00000012630) #34	FOXP2 (ENSSMRG00000012648) #35	ENSSMRG00000012664	ENSSMRG00000012670	PPP1R3A (ENSSMRG00000012682) #36	ENSSMRG00000012701
tuatara	MODERN SPECIES	1016												PNPLA7 (ENSSPUG00000017551)	DPH7 (ENSSPUG00000017505)	ENSSPUG00000017445	LSM8 (ENSSPUG00000017419) #21	CTTNBP2 (ENSSPUG00000017397) #22	CFTR (ENSSPUG00000017373) #23	ASZ1 (ENSSPUG00000017359) #24	WNT2 (ENSSPUG00000017330) #25	ST7 (ENSSPUG00000017257) #26	ENSSPUG00000017153 #27	MET (ENSSPUG00000017105) #28	CAV1 (ENSSPUG00000017094) #29	ENSSPUG00000017079 #30	ENSSPUG00000017076 #30	TES (ENSSPUG00000017069) #31	TFEC (ENSSPUG00000017062) #33
Anura	ANCESTRAL SPECIES	24	ENSGT00940000158268.a	ENSGT01030000234550.a.a.d.a.a #7	ENSGT00590000083094.a.b #8	ENSGT00940000159477 #10	ENSGT00390000013249 #11	ENSGT00940000155529.C #12	ENSGT00950000183004.a.b.a.a #14	ENSGT00940000157480 #15	ENSGT00390000015216 #16	ENSGT00940000156619	ENSGT00510000047764 #18	ENSGT00940000155472.a.a #19	ENSGT00720000108868	ENSGT00940000163982	ENSGT00730000111212 #21	ENSGT00940000158293 #22	ENSGT00940000158567 #23	ENSGT00880000138051.a #24	ENSGT00940000159231 #25	ENSGT00390000000873.a.b #26	ENSGT00950000183119.a.e.b #27	ENSGT00940000158022 #28	ENSGT00950000183006.B.f.b.a #29	ENSGT00950000183006.A.b #30	ENSGT00940000155993 #31	ENSGT00940000159404 #33	ENSGT00940000158685 #34	ENSGT00940000155480 #35	ENSGT00940000157682.B #36	ENSGT01040000241896	ENSGT00890000139436.B #37
Frog	MODERN SPECIES	3	fezf1 (ENSXETG00000022748) #10	aass (ENSXETG00000022747) #11	ptprz1 (ENSXETG00000022735) #12	ENSXETG00000045889	fam3c (ENSXETG00000022730) #14	wnt16 (ENSXETG00000022727) #15	cped1 (ENSXETG00000033347) #16	germes (ENSXETG00000022726)	ing3 (ENSXETG00000022722)	tspan12 (ENSXETG00000039927) #18	kcnd2 (ENSXETG00000033363) #19	ENSXETG00000047565	ENSXETG00000045849	ENSXETG00000021831	lsm8 (ENSXETG00000021829) #21	cttnbp2 (ENSXETG00000021813) #22	cftr (ENSXETG00000021796) #23	asz1 (ENSXETG00000021791) #24	wnt2 (ENSXETG00000031217) #25	ENSXETG00000035452	st7 (ENSXETG00000021764) #26	ENSXETG00000045498	capza2 (ENSXETG00000021760) #27	met (ENSXETG00000021752) #28	cav1 (ENSXETG00000011572) #29	cav2 (ENSXETG00000040190) #30	ENSXETG00000042149	tes (ENSXETG00000011568) #31	tfec (ENSXETG00000011566) #33	mdfic (ENSXETG00000011565) #34	foxp2 (ENSXETG00000011560) #35
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000011550	FEZF1 (ENSLLEG00000011472) #10	ENSLLEG00000011449	AASS (ENSLLEG00000011337) #11	PTPRZ1 (ENSLLEG00000010960) #12	FAM3C (ENSLLEG00000010809) #14	WNT16 (ENSLLEG00000010707) #15	ENSLLEG00000010688	CPED1 (ENSLLEG00000010420) #16	ING3 (ENSLLEG00000010107)	TSPAN12 (ENSLLEG00000009903) #18	KCND2 (ENSLLEG00000009861) #19	ENSLLEG00000009794	ENSLLEG00000009520	LSM8 (ENSLLEG00000009457) #21	CTTNBP2 (ENSLLEG00000009120) #22	CFTR (ENSLLEG00000008811) #23	ASZ1 (ENSLLEG00000008226) #24	ST7 (ENSLLEG00000007521) #26	CAPZA2 (ENSLLEG00000007430) #27	MET (ENSLLEG00000007329) #28	ENSLLEG00000007314	CAV1 (ENSLLEG00000007292) #29	CAV2 (ENSLLEG00000007273) #30	ENSLLEG00000007214	ENSLLEG00000007200	ENSLLEG00000007175	TES (ENSLLEG00000007038) #31	ENSLLEG00000007017	TFEC (ENSLLEG00000006933) #33	ENSLLEG00000006912
Coelacanth	MODERN SPECIES	1307											ENSLACG00000011742	ENSLACG00000011672	ENSLACG00000010389	LSM8 (ENSLACG00000010231) #21	ENSLACG00000022370	CTTNBP2 (ENSLACG00000006165) #22	CFTR (ENSLACG00000002983) #23