Chordata ANCESTRAL SPECIES ENSGT00940000159561 #22 Vertebrata ANCESTRAL SPECIES ENSGT00940000159561 #22 Gnathostomata ANCESTRAL SPECIES 2 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00390000011698.d ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000157224 #26 Euteleostomi ANCESTRAL SPECIES 18 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000157224 #26 Sarcopterygii ANCESTRAL SPECIES 7 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000157224 #26 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 ENSGT00390000013444.a.a ENSGT00390000008666 Tetrapoda ANCESTRAL SPECIES 23 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 ENSGT00390000013444.a.a Amniota ANCESTRAL SPECIES 8 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Mammalia ANCESTRAL SPECIES 26 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Theria ANCESTRAL SPECIES 14 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Eutheria ANCESTRAL SPECIES 12 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Glires ANCESTRAL SPECIES 12 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Rodentia ANCESTRAL SPECIES 3 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Rodentia_B ANCESTRAL SPECIES 7 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Myomorpha ANCESTRAL SPECIES 7 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Lesser Egyptian jerboa MODERN SPECIES 41 Timm9 (ENSJJAG00000007980) #7 Arid4a (ENSJJAG00000016742) #8 ENSJJAG00000001749 #9 Actr10 (ENSJJAG00000018421) #10 Armh4 (ENSJJAG00000017470) #11 ENSJJAG00000013603 #12 Slc35f4 (ENSJJAG00000001648) #13 ccdc198 (ENSJJAG00000008303) #14 Naa30 (ENSJJAG00000024025) #15 Ap5m1 (ENSJJAG00000011637) #16 Exoc5 (ENSJJAG00000024175) #17 Otx2 (ENSJJAG00000012995) #18 Tmem260 (ENSJJAG00000012902) #19 Peli2 (ENSJJAG00000003968) #20 Ktn1 (ENSJJAG00000013869) #21 Tbpl2 (ENSJJAG00000003838) #22 Atg14 (ENSJJAG00000000490) #23 Fbxo34 (ENSJJAG00000003125) #24 ENSJJAG00000018716 #25 Lgals3 (ENSJJAG00000011463) #26 ENSJJAG00000017492 #27 Socs4 (ENSJJAG00000000581) #28 Wdhd1 (ENSJJAG00000001164) #29 Gch1 (ENSJJAG00000018620) #30 Samd4 (ENSJJAG00000022702) #31 Cgrrf1 (ENSJJAG00000012678) #32 Gmfb (ENSJJAG00000018778) #33 ENSJJAG00000022265 #34 Cdkn3 (ENSJJAG00000014203) #35 Bmp4 (ENSJJAG00000005612) #36 ENSJJAG00000012414 #37 Muroidea ANCESTRAL SPECIES 16 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Upper Galilee mountains blind mole rat MODERN SPECIES 1068 Arid4a (ENSNGAG00000015701) #8 ENSNGAG00000012537 #9 Actr10 (ENSNGAG00000020352) #10 ENSNGAG00000019693 Armh4 (ENSNGAG00000008903) #11 Slc35f4 (ENSNGAG00000017272) #13 ccdc198 (ENSNGAG00000016223) #14 Naa30 (ENSNGAG00000007396) #15 Ap5m1 (ENSNGAG00000010113) #16 Exoc5 (ENSNGAG00000000258) #17 Otx2 (ENSNGAG00000015521) #18 Tmem260 (ENSNGAG00000001126) #19 Peli2 (ENSNGAG00000011043) #20 ENSNGAG00000003555 Ktn1 (ENSNGAG00000014640) #21 Tbpl2 (ENSNGAG00000002908) #22 Atg14 (ENSNGAG00000021004) #23 Fbxo34 (ENSNGAG00000016745) #24 ENSNGAG00000019620 #25 Lgals3 (ENSNGAG00000020150) #26 ENSNGAG00000002812 #27 Socs4 (ENSNGAG00000016338) #28 Wdhd1 (ENSNGAG00000019249) #29 Gch1 (ENSNGAG00000001258) #30 Samd4 (ENSNGAG00000014981) #31 Cgrrf1 (ENSNGAG00000012236) #32 Gmfb (ENSNGAG00000015674) #33 ENSNGAG00000004898 #34 Cdkn3 (ENSNGAG00000000269) #35 Bmp4 (ENSNGAG00000004531) #36 Ddhd1 (ENSNGAG00000012147) Muroidea_A ANCESTRAL SPECIES 2 ENSGT00940000156763 ENSGT00390000013158 ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.a.b ENSGT00940000159561 #22 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00900000141555 ENSGT00940000157521.b ENSGT00900000142862 ENSGT00390000008033 ENSGT00950000182860.a.b.b ENSGT00390000006631 ENSGT00900000143214 ENSGT00950000183208.A.c.a ENSGT00940000157233 ENSGT00390000016542 ENSGT00530000064137.a.b ENSGT00940000158526 Cricetidae ANCESTRAL SPECIES 12 ENSGT00940000156763 ENSGT00390000013158 ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.a.b ENSGT00940000159561 #22 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00900000141555 ENSGT00940000157521.b ENSGT00900000142862 ENSGT00390000008033 ENSGT00950000182860.a.b.b ENSGT00390000006631 ENSGT00900000143214 ENSGT00950000183208.A.c.a ENSGT00940000157233 ENSGT00390000016542 ENSGT00530000064137.a.b ENSGT00940000158526 Cricetinae ANCESTRAL SPECIES 1 ENSGT00390000013158 ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.b.a.b ENSGT00550000075010.i.a ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.a.b ENSGT00940000159561 #22 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00900000141555 ENSGT00940000157521.b ENSGT00900000142862 ENSGT00390000008033 ENSGT00950000182860.a.b.b ENSGT00390000006631 ENSGT00900000143214 ENSGT00950000183208.A.c.a ENSGT00940000157233 ENSGT00390000016542 ENSGT00530000064137.a.b ENSGT00940000158526 Golden Hamster MODERN SPECIES 771 ENSMAUG00000012054 Mrpl41 (ENSMAUG00000009177) Dph7 (ENSMAUG00000017456) Zmynd19 (ENSMAUG00000001242) Arrdc1 (ENSMAUG00000009636) Ehmt1 (ENSMAUG00000004489) Cacna1b (ENSMAUG00000008461) Pax8 (ENSMAUG00000004288) Psd4 (ENSMAUG00000011834) Il1rn (ENSMAUG00000015417) Il1f10 (ENSMAUG00000020632) ENSMAUG00000020771 Il36b (ENSMAUG00000000983) ENSMAUG00000013215 Il36a (ENSMAUG00000001890) Tbpl2 (ENSMAUG00000014410) #22 Hnmt (ENSMAUG00000018906) Spopl (ENSMAUG00000007822) Nxph2 (ENSMAUG00000021061) Chinese hamster chok1gshd MODERN SPECIES 188 Mrpl41 (ENSCGRG00001007509) Dph7 (ENSCGRG00001002276) Zmynd19 (ENSCGRG00001007529) Arrdc1 (ENSCGRG00001003052) Ehmt1 (ENSCGRG00001002035) Cacna1b (ENSCGRG00001018788) Pax8 (ENSCGRG00001017508) Psd4 (ENSCGRG00001010714) Il1rn (ENSCGRG00001005108) Il1f10 (ENSCGRG00001003880) Il36rn (ENSCGRG00001010036) Il36b (ENSCGRG00001008679) ENSCGRG00001008839 Il36a (ENSCGRG00001005772) ENSCGRG00001015320 Tbpl2 (ENSCGRG00001015310) #22 ENSCGRG00001009248 ENSCGRG00001001542 ENSCGRG00001024843 ENSCGRG00001008614 Spopl (ENSCGRG00001010346) Nxph2 (ENSCGRG00001024840) ENSCGRG00001024491 ENSCGRG00001009004 ENSCGRG00001012428 Kynu (ENSCGRG00001005556) Arhgap15 (ENSCGRG00001011371) ENSCGRG00001008381 Gtdc1 (ENSCGRG00001014426) ENSCGRG00001006690 Zeb2 (ENSCGRG00001003812) Cricetidae_B ANCESTRAL SPECIES 7 ENSGT00940000156763 ENSGT00390000013158 ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.a.b ENSGT00940000159561 #22 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00900000141555 ENSGT00940000157521.b ENSGT00390000008033 ENSGT00950000182860.a.b.b ENSGT00390000006631 ENSGT00950000183208.A.c.a ENSGT00940000157233 ENSGT00390000016542 ENSGT00530000064137.a.b ENSGT00940000158526 ENSGT00940000158539 ENSGT00390000000220.A Prairie vole MODERN SPECIES 12 ENSMOCG00000012128 Mrpl41 (ENSMOCG00000014971) Dph7 (ENSMOCG00000008115) Zmynd19 (ENSMOCG00000019044) ENSMOCG00000018871 Ehmt1 (ENSMOCG00000020570) Cacna1b (ENSMOCG00000020272) Pax8 (ENSMOCG00000021381) Psd4 (ENSMOCG00000007380) Il1rn (ENSMOCG00000007998) Il1f10 (ENSMOCG00000018045) Il36rn (ENSMOCG00000001287) Il36b (ENSMOCG00000003995) Il36a (ENSMOCG00000007131) Il36g (ENSMOCG00000018096) Tbpl2 (ENSMOCG00000012483) #22 Hnmt (ENSMOCG00000004456) Spopl (ENSMOCG00000018403) Nxph2 (ENSMOCG00000003297) ENSMOCG00000007029 ENSMOCG00000008295 Lrp1b (ENSMOCG00000007280) ENSMOCG00000001529 ENSMOCG00000020186 ENSMOCG00000021528 Kynu (ENSMOCG00000018120) Arhgap15 (ENSMOCG00000022212) Gtdc1 (ENSMOCG00000022059) Zeb2 (ENSMOCG00000016943) ENSMOCG00000007379 Acvr2a (ENSMOCG00000001323) Northern American deer mouse MODERN SPECIES 17 Pnpla7 (ENSPEMG00000025361) Mrpl41 (ENSPEMG00000009904) ENSPEMG00000017191 Zmynd19 (ENSPEMG00000014564) Arrdc1 (ENSPEMG00000003766) Ehmt1 (ENSPEMG00000003429) Cacna1b (ENSPEMG00000007882) Pax8 (ENSPEMG00000015473) Psd4 (ENSPEMG00000017053) Il1rn (ENSPEMG00000025629) Il1f10 (ENSPEMG00000024948) Il36rn (ENSPEMG00000019139) Il36b (ENSPEMG00000007893) Il36a (ENSPEMG00000000991) Il36g (ENSPEMG00000006996) Tbpl2 (ENSPEMG00000018472) #22 ENSPEMG00000030551 Hnmt (ENSPEMG00000016185) ENSPEMG00000029398 Spopl (ENSPEMG00000024413) Nxph2 (ENSPEMG00000014216) ENSPEMG00000027862 ENSPEMG00000030960 Lrp1b (ENSPEMG00000019442) ENSPEMG00000019536 #34 ENSPEMG00000029273 ENSPEMG00000028178 Kynu (ENSPEMG00000011128) Arhgap15 (ENSPEMG00000008557) Gtdc1 (ENSPEMG00000006747) Zeb2 (ENSPEMG00000004029) Murinae ANCESTRAL SPECIES 1 ENSGT00940000156763 ENSGT00390000013158 ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.a.b ENSGT00940000159561 #22 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a Rat MODERN SPECIES 13 Mrpl41 (ENSRNOG00000063489) Dph7 (ENSRNOG00000008102) Zmynd19 (ENSRNOG00000007752) Arrdc1 (ENSRNOG00000007622) Ehmt1 (ENSRNOG00000007242) Cacna1b (ENSRNOG00000004560) Pax8 (ENSRNOG00000026203) Psd4 (ENSRNOG00000006079) Il1rn (ENSRNOG00000005871) Il1f10 (ENSRNOG00000005800) Il36rn (ENSRNOG00000005751) Il36b (ENSRNOG00000043323) Il36a (ENSRNOG00000005722) Il36g (ENSRNOG00000005701) ENSRNOG00000067068 Tbpl2 (ENSRNOG00000033682) #22 Hnmt (ENSRNOG00000005223) Spopl (ENSRNOG00000005070) Nxph2 (ENSRNOG00000040333) ENSRNOG00000062547 ENSRNOG00000065360 LOC100912517 (ENSRNOG00000070048) ENSRNOG00000062892 LOC302022 (ENSRNOG00000064527) ENSRNOG00000068640 ENSRNOG00000063301 ENSRNOG00000062930 LOC100910078 (ENSRNOG00000049619) LOC108353098 (ENSRNOG00000048867) ENSRNOG00000067882 Mus ANCESTRAL SPECIES 1 ENSGT00940000156763 ENSGT00390000013158 ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.a.b ENSGT00940000159561 #22 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00940000153661.a.b.a.b.a.b.a.b ENSGT00550000074836 ENSGT00940000157002 ENSGT00940000156350 ENSGT00940000154811.A ENSGT00940000153498.B.a ENSGT00940000156105 ENSGT00940000157951 ENSGT00940000155939 ENSGT00940000155918 ENSGT00940000161144 ENSGT00940000153866.A Shrew mouse MODERN SPECIES 16 Nsmf (MGP_PahariEiJ_G0024704) MGP_PahariEiJ_G0024703 Mrpl41 (MGP_PahariEiJ_G0024702) Dph7 (MGP_PahariEiJ_G0024701) Zmynd19 (MGP_PahariEiJ_G0024700) Arrdc1 (MGP_PahariEiJ_G0024699) Ehmt1 (MGP_PahariEiJ_G0024698) Cacna1b (MGP_PahariEiJ_G0024697) Pax8 (MGP_PahariEiJ_G0024696) MGP_PahariEiJ_G0024695 Il1rn (MGP_PahariEiJ_G0024694) Il1f10 (MGP_PahariEiJ_G0024693) Il36rn (MGP_PahariEiJ_G0024692) MGP_PahariEiJ_G0024691 Il36a (MGP_PahariEiJ_G0024690) MGP_PahariEiJ_G0024689 #22 Hnmt (MGP_PahariEiJ_G0024688) MGP_PahariEiJ_G0024687 Spopl (MGP_PahariEiJ_G0024686) Nxph2 (MGP_PahariEiJ_G0024685) Yme1l1 (MGP_PahariEiJ_G0024684) Mastl (MGP_PahariEiJ_G0024683) Acbd5 (MGP_PahariEiJ_G0024682) Abi1 (MGP_PahariEiJ_G0024681) Pdss1 (MGP_PahariEiJ_G0024680) Apbb1ip (MGP_PahariEiJ_G0024679) Gad2 (MGP_PahariEiJ_G0024678) Myo3a (MGP_PahariEiJ_G0024677) Gpr158 (MGP_PahariEiJ_G0024676) Thnsl1 (MGP_PahariEiJ_G0024675) Enkur (MGP_PahariEiJ_G0024674) Mus_A ANCESTRAL SPECIES ENSGT00940000156763 ENSGT00390000013158.t ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.a.b ENSGT00940000159561 #22 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00940000153661.a.b.a.b.a.b.a.b ENSGT00550000074836 ENSGT00940000157002 ENSGT00940000156350 ENSGT00940000154811.A ENSGT00940000153498.B.a ENSGT00940000156105 ENSGT00940000157951 ENSGT00940000155939 ENSGT00940000155918 ENSGT00940000161144 ENSGT00940000153866.A Mus_B ANCESTRAL SPECIES 1 ENSGT00940000156763 ENSGT00390000013158.t ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.a.b ENSGT00940000159561 #22 ENSGT00390000002862 ENSGT00940000155953 ENSGT00950000182883.b.a.a ENSGT00940000153661.a.b.a.b.a.b.a.b ENSGT00550000074836 ENSGT00940000157002 ENSGT00940000156350 ENSGT00940000154811.A ENSGT00940000153498.B.a ENSGT00940000156105 ENSGT00940000157951 ENSGT00940000155939 ENSGT00940000155918 ENSGT00940000161144 ENSGT00940000153866.A Mus_C ANCESTRAL SPECIES ENSGT00940000156763 ENSGT00390000013158.t ENSGT00390000018644 ENSGT00940000153820.b.a ENSGT00940000159652 ENSGT00940000156002.b ENSGT00940000155275.d ENSGT00940000161868 ENSGT00940000161976 ENSGT00950000182943.kb.b.a.b.b.a ENSGT00950000182943.kb.b.a.b.b.b ENSGT00950000182943.kb.b.a.b.a ENSGT00950000182943.kb.b.b.a.b ENSGT00950000182943.kb.b.b.a.a.a ENSGT00950000182943.kb.b.b.a.a.b ENSGT00940000159561 #22 ENSGT00390000002862 spretus MODERN SPECIES 11 Nsmf (MGP_SPRETEiJ_G0024163) Pnpla7 (MGP_SPRETEiJ_G0024162) Mrpl41 (MGP_SPRETEiJ_G0024161) Dph7 (MGP_SPRETEiJ_G0024160) Zmynd19 (MGP_SPRETEiJ_G0024159) Arrdc1 (MGP_SPRETEiJ_G0024158) Ehmt1 (MGP_SPRETEiJ_G0024157) Cacna1b (MGP_SPRETEiJ_G0024156) Pax8 (MGP_SPRETEiJ_G0024155) Psd4 (MGP_SPRETEiJ_G0024154) Il1rn (MGP_SPRETEiJ_G0024153) Il1f10 (MGP_SPRETEiJ_G0024152) Il36rn (MGP_SPRETEiJ_G0024151) Il36a (MGP_SPRETEiJ_G0024150) Il36g (MGP_SPRETEiJ_G0024149) Tbpl2 (MGP_SPRETEiJ_G0024148) #22 Hnmt (MGP_SPRETEiJ_G0024147) MGP_SPRETEiJ_G0024146 Nxph2 (MGP_SPRETEiJ_G0024145) MGP_SPRETEiJ_G0024144 MGP_SPRETEiJ_G0024143 Mastl (MGP_SPRETEiJ_G0024142) Acbd5 (MGP_SPRETEiJ_G0024141) Abi1 (MGP_SPRETEiJ_G0024140) Pdss1 (MGP_SPRETEiJ_G0024139) Apbb1ip (MGP_SPRETEiJ_G0024138) Gad2 (MGP_SPRETEiJ_G0024137) MGP_SPRETEiJ_G0024136 Gpr158 (MGP_SPRETEiJ_G0024135) Thnsl1 (MGP_SPRETEiJ_G0024134) Enkur (MGP_SPRETEiJ_G0024133) Steppe mouse MODERN SPECIES 2324 Tbpl2 (ENSMSIG00000001006) #22 Hnmt (ENSMSIG00000000952) Mouse MODERN SPECIES 11 Pnpla7 (ENSMUSG00000036833) Mrpl41 (ENSMUSG00000036850) Dph7 (ENSMUSG00000026975) Zmynd19 (ENSMUSG00000026974) Arrdc1 (ENSMUSG00000026972) Ehmt1 (ENSMUSG00000036893) Cacna1b (ENSMUSG00000004113) Pax8 (ENSMUSG00000026976) Psd4 (ENSMUSG00000026979) Il1rn (ENSMUSG00000026981) Il1f10 (ENSMUSG00000046845) Il36rn (ENSMUSG00000026983) Il36a (ENSMUSG00000026984) Il36g (ENSMUSG00000044103) Il36b (ENSMUSG00000026985) Tbpl2 (ENSMUSG00000061809) #22 Hnmt (ENSMUSG00000026986) Spopl (ENSMUSG00000026771) Nxph2 (ENSMUSG00000069132) Potegl (ENSMUSG00000026774) Yme1l1 (ENSMUSG00000026775) Mastl (ENSMUSG00000026779) Acbd5 (ENSMUSG00000026781) Abi1 (ENSMUSG00000058835) Pdss1 (ENSMUSG00000026784) Apbb1ip (ENSMUSG00000026786) Gad2 (ENSMUSG00000026787) Myo3a (ENSMUSG00000025716) Gpr158 (ENSMUSG00000045967) Thnsl1 (ENSMUSG00000048550) Enkur (ENSMUSG00000026679) Ryukyu mouse MODERN SPECIES 11 Nsmf (MGP_CAROLIEiJ_G0023246) MGP_CAROLIEiJ_G0023245 Mrpl41 (MGP_CAROLIEiJ_G0023244) MGP_CAROLIEiJ_G0023243 Zmynd19 (MGP_CAROLIEiJ_G0023242) Arrdc1 (MGP_CAROLIEiJ_G0023241) Ehmt1 (MGP_CAROLIEiJ_G0023240) Cacna1b (MGP_CAROLIEiJ_G0023239) Pax8 (MGP_CAROLIEiJ_G0023238) Psd4 (MGP_CAROLIEiJ_G0023237) Il1rn (MGP_CAROLIEiJ_G0023236) Il1f10 (MGP_CAROLIEiJ_G0023235) Il36rn (MGP_CAROLIEiJ_G0023234) Il36a (MGP_CAROLIEiJ_G0023233) Il36g (MGP_CAROLIEiJ_G0023232) Tbpl2 (MGP_CAROLIEiJ_G0023231) #22 Hnmt (MGP_CAROLIEiJ_G0023230) Spopl (MGP_CAROLIEiJ_G0023229) Nxph2 (MGP_CAROLIEiJ_G0023228) MGP_CAROLIEiJ_G0023227 Acbd5 (MGP_CAROLIEiJ_G0023226) Abi1 (MGP_CAROLIEiJ_G0023225) Pdss1 (MGP_CAROLIEiJ_G0023224) Apbb1ip (MGP_CAROLIEiJ_G0023223) Gad2 (MGP_CAROLIEiJ_G0023222) Myo3a (MGP_CAROLIEiJ_G0023221) Gpr158 (MGP_CAROLIEiJ_G0023220) Thnsl1 (MGP_CAROLIEiJ_G0023219) Enkur (MGP_CAROLIEiJ_G0023218) Arhgap21 (MGP_CAROLIEiJ_G0023217) Etl4 (MGP_CAROLIEiJ_G0023216) Kangaroo rat MODERN SPECIES 335 Slc35f4 (ENSDORG00000007892) #13 ccdc198 (ENSDORG00000007890) #14 Naa30 (ENSDORG00000007889) #15 Ap5m1 (ENSDORG00000009064) #16 Exoc5 (ENSDORG00000009057) #17 ENSDORG00000028570 #18 Tmem260 (ENSDORG00000002945) #19 Peli2 (ENSDORG00000025308) #20 Ktn1 (ENSDORG00000013437) #21 Tbpl2 (ENSDORG00000003307) #22 Atg14 (ENSDORG00000029414) #23 Fbxo34 (ENSDORG00000027170) #24 ENSDORG00000027913 #25 ENSDORG00000028754 ENSDORG00000027672 #27 Socs4 (ENSDORG00000001293) #28 Wdhd1 (ENSDORG00000028674) #29 Gch1 (ENSDORG00000007760) #30 Samd4 (ENSDORG00000009363) #31 Cgrrf1 (ENSDORG00000008660) #32 Gmfb (ENSDORG00000008658) #33 Cnih1 (ENSDORG00000026996) #34 Cdkn3 (ENSDORG00000001490) #35 ENSDORG00000027165 Bmp4 (ENSDORG00000010496) #36 Rodentia_A ANCESTRAL SPECIES 2 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Hystricomorpha ANCESTRAL SPECIES 97 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 Hystricomorpha_a ANCESTRAL SPECIES 27 ENSGT00390000008727.a.b #13 ENSGT00390000012816 #11 ENSGT00910000144250 #10 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102.p #7 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 Guinea pig MODERN SPECIES 20 AP5M1 (ENSCPOG00000003004) #16 CCDC198 (ENSCPOG00000003345) #14 SLC35F4 (ENSCPOG00000011150) #13 ACTR10 (ENSCPOG00000008553) #10 PSMA3 (ENSCPOG00000006114) #9 ENSCPOG00000032725 #8 ENSCPOG00000009290 #8 TIMM9 (ENSCPOG00000035363) #7 KIAA0586 (ENSCPOG00000001244) DACT1 (ENSCPOG00000039410) DAAM1 (ENSCPOG00000013581) L3HYPDH (ENSCPOG00000014476) JKAMP (ENSCPOG00000014480) ENSCPOG00000007411 KTN1 (ENSCPOG00000014763) #21 TBPL2 (ENSCPOG00000006151) #22 ATG14 (ENSCPOG00000001010) #23 FBXO34 (ENSCPOG00000032685) #24 Hystricomorpha_b ANCESTRAL SPECIES 46 ENSGT00390000008727.a.b #13 ENSGT00390000012816 #11 ENSGT00910000144250 #10 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102.o.a #7 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000156452 ENSGT00950000182998.A ENSGT00390000002032 ENSGT00390000018097 ENSGT00390000001277 ENSGT00940000155077.e.a ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000161472 ENSGT00390000017666.p ENSGT00940000158243 ENSGT00940000157417 ENSGT00940000155944 ENSGT00940000157159 ENSGT00940000159153 ENSGT00390000009546 ENSGT00390000016097 ENSGT00730000111019 ENSGT00940000158751 ENSGT00940000156891 ENSGT00940000156005.a Degu MODERN SPECIES 48 ENSODEG00000014925 #7 DACT1 (ENSODEG00000014574) ENSODEG00000015435 DAAM1 (ENSODEG00000014128) L3HYPDH (ENSODEG00000015887) JKAMP (ENSODEG00000014669) ENSODEG00000014803 ENSODEG00000014970 ENSODEG00000020245 ENSODEG00000020257 ENSODEG00000015513 ENSODEG00000014407 KTN1 (ENSODEG00000015972) #21 ENSODEG00000020182 ENSODEG00000020193 TBPL2 (ENSODEG00000015283) #22 ATG14 (ENSODEG00000014397) #23 ENSODEG00000014741 ENSODEG00000014683 TTC9 (ENSODEG00000015092) ENSODEG00000020259 MAP3K9 (ENSODEG00000015307) PCNX1 (ENSODEG00000015239) SIPA1L1 (ENSODEG00000014862) RGS6 (ENSODEG00000017055) DPF3 (ENSODEG00000015669) ZFYVE1 (ENSODEG00000015740) ENSODEG00000015250 ENSODEG00000016847 PSEN1 (ENSODEG00000016888) PAPLN (ENSODEG00000016332) Long-tailed chinchilla MODERN SPECIES 173 PSMA3 (ENSCLAG00000004169) #9 ENSCLAG00000003914 #8 TIMM9 (ENSCLAG00000004069) #7 KIAA0586 (ENSCLAG00000004355) ENSCLAG00000005082 DACT1 (ENSCLAG00000005231) DAAM1 (ENSCLAG00000005812) GPR135 (ENSCLAG00000003808) L3HYPDH (ENSCLAG00000003825) JKAMP (ENSCLAG00000004418) CCDC175 (ENSCLAG00000004873) ENSCLAG00000005327 ENSCLAG00000004233 KTN1 (ENSCLAG00000004903) #21 ENSCLAG00000007765 TBPL2 (ENSCLAG00000013407) #22 ATG14 (ENSCLAG00000010991) #23 FBXO34 (ENSCLAG00000018001) #24 Naked mole-rat female MODERN SPECIES 30 ENSHGLG00000035710 ENSHGLG00000048882 ACBD3 (ENSHGLG00000005012) ENSHGLG00000041314 MIXL1 (ENSHGLG00000045669) LIN9 (ENSHGLG00000007823) Parp1 (ENSHGLG00000003992) ENSHGLG00000035038 PLAG1 (ENSHGLG00000001672) MOS (ENSHGLG00000049453) ENSHGLG00000033196 LYN (ENSHGLG00000002926) ENSHGLG00000000284 ENSHGLG00000000295 ENSHGLG00000000769 #21 TBPL2 (ENSHGLG00000001017) #22 ENSHGLG00000001414 #23 ENSHGLG00000049393 #24 ENSHGLG00000016069 ENSHGLG00000017345 PCNT (ENSHGLG00000015807) DIP2A (ENSHGLG00000014043) ENSHGLG00000013120 ENSHGLG00000015854 ENSHGLG00000032905 ENSHGLG00000047983 ENSHGLG00000051009 ENSHGLG00000042568 ENSHGLG00000012384 ENSHGLG00000050008 RPP38 (ENSHGLG00000012144) Sciuridae ANCESTRAL SPECIES 8 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT01010000230324 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT01010000222666 #25 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Marmotini ANCESTRAL SPECIES 15 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT01010000230324 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00390000006178.gb ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065.c Marmotini_b ANCESTRAL SPECIES 14 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191.e #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00390000006178.gb ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a.o #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065.c Squirrel MODERN SPECIES 95 ARID4A (ENSSTOG00000019680) #8 PSMA3 (ENSSTOG00000013539) #9 ACTR10 (ENSSTOG00000013532) #10 ARMH4 (ENSSTOG00000013525) #11 SLC35F4 (ENSSTOG00000010865) #13 CCDC198 (ENSSTOG00000010860) #14 NAA30 (ENSSTOG00000011080) #15 ENSSTOG00000011073 #16 EXOC5 (ENSSTOG00000024424) #17 OTX2 (ENSSTOG00000028544) #18 TMEM260 (ENSSTOG00000012683) #19 PELI2 (ENSSTOG00000020268) #20 ENSSTOG00000020034 ENSSTOG00000021980 ENSSTOG00000030548 #21 TBPL2 (ENSSTOG00000015196) #22 ATG14 (ENSSTOG00000027784) #23 FBXO34 (ENSSTOG00000015182) #24 Arctic ground squirrel MODERN SPECIES 27 ARID4A (ENSUPAG00010000903) #8 PSMA3 (ENSUPAG00010000924) #9 ACTR10 (ENSUPAG00010000951) #10 ARMH4 (ENSUPAG00010000968) #11 SLC35F4 (ENSUPAG00010001052) #13 CCDC198 (ENSUPAG00010001074) #14 NAA30 (ENSUPAG00010001083) #15 AP5M1 (ENSUPAG00010001100) #16 EXOC5 (ENSUPAG00010001129) #17 OTX2 (ENSUPAG00010001231) #18 TMEM260 (ENSUPAG00010001276) #19 PELI2 (ENSUPAG00010001379) #20 ENSUPAG00010001410 KTN1 (ENSUPAG00010001418) #21 ENSUPAG00010003052 TBPL2 (ENSUPAG00010003064) #22 ATG14 (ENSUPAG00010003072) #23 FBXO34 (ENSUPAG00010003083) #24 ENSUPAG00010003095 #25 LGALS3 (ENSUPAG00010003112) #26 MAPK1IP1L (ENSUPAG00010003130) #27 SOCS4 (ENSUPAG00010003145) #28 WDHD1 (ENSUPAG00010003149) #29 GCH1 (ENSUPAG00010003221) #30 SAMD4A (ENSUPAG00010003229) #31 CGRRF1 (ENSUPAG00010003511) #32 GMFB (ENSUPAG00010003533) #33 CNIH1 (ENSUPAG00010003545) #34 CDKN3 (ENSUPAG00010003565) #35 BMP4 (ENSUPAG00010003585) #36 FIBIN (ENSUPAG00010003590) Alpin marmot MODERN SPECIES 7 ARMH4 (ENSMMMG00000005430) #11 SLC35F4 (ENSMMMG00000005414) #13 CCDC198 (ENSMMMG00000005385) #14 NAA30 (ENSMMMG00000005369) #15 ENSMMMG00000005364 AP5M1 (ENSMMMG00000005334) #16 EXOC5 (ENSMMMG00000005231) #17 ENSMMMG00000005219 OTX2 (ENSMMMG00000005205) #18 ENSMMMG00000005191 TMEM260 (ENSMMMG00000005095) #19 PELI2 (ENSMMMG00000005044) #20 ENSMMMG00000005015 KTN1 (ENSMMMG00000003061) #21 ENSMMMG00000002960 TBPL2 (ENSMMMG00000002943) #22 ATG14 (ENSMMMG00000002906) #23 FBXO34 (ENSMMMG00000002895) #24 ENSMMMG00000002883 #25 LGALS3 (ENSMMMG00000002842) #26 MAPK1IP1L (ENSMMMG00000002821) #27 SOCS4 (ENSMMMG00000002820) #28 WDHD1 (ENSMMMG00000002686) #29 GCH1 (ENSMMMG00000002659) #30 SAMD4A (ENSMMMG00000002450) #31 CGRRF1 (ENSMMMG00000002415) #32 GMFB (ENSMMMG00000002388) #33 CNIH1 (ENSMMMG00000002362) #34 CDKN3 (ENSMMMG00000002335) #35 BMP4 (ENSMMMG00000002321) #36 ENSMMMG00000001924 Lagomorpha ANCESTRAL SPECIES 14 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065.f Rabbit MODERN SPECIES 8 PSMA3 (ENSOCUG00000010316) #9 ACTR10 (ENSOCUG00000003358) #10 ARMH4 (ENSOCUG00000012279) #11 CDC34 (ENSOCUG00000022563) ENSOCUG00000030253 SLC35F4 (ENSOCUG00000000541) #13 CCDC198 (ENSOCUG00000015402) #14 NAA30 (ENSOCUG00000008997) #15 AP5M1 (ENSOCUG00000009782) #16 ENSOCUG00000000756 #17 OTX2 (ENSOCUG00000002633) #18 TMEM260 (ENSOCUG00000002619) #19 ENSOCUG00000016399 PELI2 (ENSOCUG00000002611) #20 KTN1 (ENSOCUG00000010650) #21 TBPL2 (ENSOCUG00000014738) #22 ATG14 (ENSOCUG00000014723) #23 FBXO34 (ENSOCUG00000010779) #24 DLGAP5 (ENSOCUG00000002926) LGALS3 (ENSOCUG00000002924) #26 MAPK1IP1L (ENSOCUG00000004003) #27 SOCS4 (ENSOCUG00000004006) #28 WDHD1 (ENSOCUG00000004987) #29 ENSOCUG00000003060 #30 SAMD4A (ENSOCUG00000003420) #31 CGRRF1 (ENSOCUG00000001097) #32 GMFB (ENSOCUG00000004488) #33 CNIH1 (ENSOCUG00000039011) #34 CDKN3 (ENSOCUG00000003047) #35 ENSOCUG00000037068 BMP4 (ENSOCUG00000011097) #36 Pika DUPLICATION Pika MODERN SPECIES 296 ENSOPRG00000007997 #22 PDCD2 (ENSOPRG00000008013) Pika MODERN SPECIES 3899 KTN1 (ENSOPRG00000016727) #21 ENSOPRG00000016711 TBPL2 (ENSOPRG00000016699) #22 Tree shrew MODERN SPECIES 5049 TBPL2 (ENSTBEG00000003892) #22 ATG14 (ENSTBEG00000003536) #23 DLGAP5 (ENSTBEG00000002960) ENSTBEG00000002801 #26 MAPK1IP1L (ENSTBEG00000002697) #27 ENSTBEG00000002086 #29 Primates ANCESTRAL SPECIES 2 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Haplorrhini ANCESTRAL SPECIES 12 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Simiiformes ANCESTRAL SPECIES 2 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Catarrhini ANCESTRAL SPECIES 9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00390000004745 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00390000010799.u.b.a.a.b.o.b ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000154663.v ENSGT00390000001424.pb.a ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Hominoidea ANCESTRAL SPECIES 12 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837.e #17 ENSGT00390000004745 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00390000010799.u.b.a.a.b.o.b ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000154663.v ENSGT00390000001424.pb.a ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Hominidae ANCESTRAL SPECIES 14 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837.e #17 ENSGT00390000004745 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000154663.v ENSGT00390000001424.pb.a ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 12 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837.e #17 ENSGT00390000004745 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000154663.v ENSGT00390000001424.pb.a ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Homo/Pan group ANCESTRAL SPECIES 11 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837.e #17 ENSGT00390000004745 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502.l #36 ENSGT00390000006837.e.b Pan ANCESTRAL SPECIES 8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837.e #17 ENSGT00390000004745 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000154663.v ENSGT00390000001424.pb.a ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Chimpanzee MODERN SPECIES 5 ARID4A (ENSPTRG00000006393) #8 PSMA3 (ENSPTRG00000006390) #9 ACTR10 (ENSPTRG00000006389) #10 ARMH4 (ENSPTRG00000006388) #11 SLC35F4 (ENSPTRG00000006387) #13 CCDC198 (ENSPTRG00000006386) #14 NAA30 (ENSPTRG00000006385) #15 AP5M1 (ENSPTRG00000006384) #16 ENSPTRG00000052098 EXOC5 (ENSPTRG00000023297) #17 OTX2 (ENSPTRG00000006381) #18 TMEM260 (ENSPTRG00000006380) #19 ENSPTRG00000046110 PELI2 (ENSPTRG00000049032) #20 KTN1 (ENSPTRG00000006378) #21 TBPL2 (ENSPTRG00000006376) #22 ATG14 (ENSPTRG00000006375) #23 FBXO34 (ENSPTRG00000006373) #24 ENSPTRG00000050637 ENSPTRG00000048659 ENSPTRG00000005754 DLGAP5 (ENSPTRG00000006371) LGALS3 (ENSPTRG00000006370) #26 MAPK1IP1L (ENSPTRG00000044583) #27 SOCS4 (ENSPTRG00000043978) #28 WDHD1 (ENSPTRG00000006366) #29 GCH1 (ENSPTRG00000006365) #30 SAMD4A (ENSPTRG00000006364) #31 CGRRF1 (ENSPTRG00000006363) #32 GMFB (ENSPTRG00000023658) #33 CNIH1 (ENSPTRG00000006361) #34 Bonobo MODERN SPECIES 5 ACTR10 (ENSPPAG00000038910) #10 ARMH4 (ENSPPAG00000040474) #11 SLC35F4 (ENSPPAG00000031826) #13 CCDC198 (ENSPPAG00000035537) #14 ENSPPAG00000039070 #15 AP5M1 (ENSPPAG00000040615) #16 EXOC5 (ENSPPAG00000035633) #17 ENSPPAG00000033104 ENSPPAG00000027283 ENSPPAG00000016433 OTX2 (ENSPPAG00000041036) #18 TMEM260 (ENSPPAG00000035414) #19 ENSPPAG00000043810 PELI2 (ENSPPAG00000040323) #20 KTN1 (ENSPPAG00000028706) #21 TBPL2 (ENSPPAG00000032927) #22 ATG14 (ENSPPAG00000031641) #23 FBXO34 (ENSPPAG00000025212) #24 ENSPPAG00000032231 ENSPPAG00000028784 ENSPPAG00000041255 DLGAP5 (ENSPPAG00000027413) LGALS3 (ENSPPAG00000033425) #26 MAPK1IP1L (ENSPPAG00000027639) #27 SOCS4 (ENSPPAG00000009240) #28 WDHD1 (ENSPPAG00000035486) #29 GCH1 (ENSPPAG00000040536) #30 SAMD4A (ENSPPAG00000040127) #31 CGRRF1 (ENSPPAG00000037026) #32 GMFB (ENSPPAG00000003701) #33 CNIH1 (ENSPPAG00000031271) #34 Human MODERN SPECIES 5 TIMM9 (ENSG00000100575) #7 TOMM20L (ENSG00000196860) ARID4A (ENSG00000032219) #8 PSMA3 (ENSG00000100567) #9 ACTR10 (ENSG00000131966) #10 ARMH4 (ENSG00000139971) #11 SLC35F4 (ENSG00000151812) #13 CCDC198 (ENSG00000100557) #14 NAA30 (ENSG00000139977) #15 AP5M1 (ENSG00000053770) #16 EXOC5 (ENSG00000070367) #17 OTX2 (ENSG00000165588) #18 TMEM260 (ENSG00000070269) #19 PELI2 (ENSG00000139946) #20 KTN1 (ENSG00000126777) #21 TBPL2 (ENSG00000182521) #22 ATG14 (ENSG00000126775) #23 FBXO34 (ENSG00000178974) #24 DLGAP5 (ENSG00000126787) LGALS3 (ENSG00000131981) #26 MAPK1IP1L (ENSG00000168175) #27 SOCS4 (ENSG00000180008) #28 WDHD1 (ENSG00000198554) #29 GCH1 (ENSG00000131979) #30 SAMD4A (ENSG00000020577) #31 CGRRF1 (ENSG00000100532) #32 GMFB (ENSG00000197045) #33 CNIH1 (ENSG00000100528) #34 CDKN3 (ENSG00000100526) #35 BMP4 (ENSG00000125378) #36 DDHD1 (ENSG00000100523) Gorilla MODERN SPECIES 5 TOMM20L (ENSGGOG00000001739) ARID4A (ENSGGOG00000027092) #8 PSMA3 (ENSGGOG00000015814) #9 ACTR10 (ENSGGOG00000006866) #10 ARMH4 (ENSGGOG00000012037) #11 SLC35F4 (ENSGGOG00000015232) #13 CCDC198 (ENSGGOG00000022506) #14 AP5M1 (ENSGGOG00000005710) #16 ENSGGOG00000023022 #17 ENSGGOG00000025246 OTX2 (ENSGGOG00000004038) #18 TMEM260 (ENSGGOG00000015629) #19 ENSGGOG00000040841 PELI2 (ENSGGOG00000044000) #20 KTN1 (ENSGGOG00000016707) #21 TBPL2 (ENSGGOG00000001055) #22 ATG14 (ENSGGOG00000041100) #23 FBXO34 (ENSGGOG00000006852) #24 ENSGGOG00000023316 ENSGGOG00000003194 DLGAP5 (ENSGGOG00000003460) LGALS3 (ENSGGOG00000003457) #26 MAPK1IP1L (ENSGGOG00000041654) #27 SOCS4 (ENSGGOG00000042890) #28 WDHD1 (ENSGGOG00000007744) #29 ENSGGOG00000011080 #30 SAMD4A (ENSGGOG00000000673) #31 CGRRF1 (ENSGGOG00000000676) #32 GMFB (ENSGGOG00000025228) #33 CNIH1 (ENSGGOG00000013282) #34 CDKN3 (ENSGGOG00000005725) #35 Orangutan MODERN SPECIES 5 ARID4A (ENSPPYG00000005857) #8 PSMA3 (ENSPPYG00000005855) #9 ACTR10 (ENSPPYG00000005854) #10 ARMH4 (ENSPPYG00000005853) #11 SLC35F4 (ENSPPYG00000005852) #13 CCDC198 (ENSPPYG00000005851) #14 NAA30 (ENSPPYG00000005850) #15 AP5M1 (ENSPPYG00000005849) #16 EXOC5 (ENSPPYG00000005848) #17 ENSPPYG00000005847 OTX2 (ENSPPYG00000005846) #18 TMEM260 (ENSPPYG00000040522) #19 ENSPPYG00000005844 PELI2 (ENSPPYG00000038761) #20 KTN1 (ENSPPYG00000005842) #21 TBPL2 (ENSPPYG00000005840) #22 ATG14 (ENSPPYG00000005839) #23 ENSPPYG00000041712 FBXO34 (ENSPPYG00000029688) #24 ENSPPYG00000030301 DLGAP5 (ENSPPYG00000005838) LGALS3 (ENSPPYG00000005837) #26 MAPK1IP1L (ENSPPYG00000039502) #27 SOCS4 (ENSPPYG00000037748) #28 WDHD1 (ENSPPYG00000005834) #29 GCH1 (ENSPPYG00000005833) #30 SAMD4A (ENSPPYG00000005832) #31 CGRRF1 (ENSPPYG00000005831) #32 GMFB (ENSPPYG00000005830) #33 CNIH1 (ENSPPYG00000005829) #34 CDKN3 (ENSPPYG00000005827) #35 Gibbon MODERN SPECIES 10 PSMA3 (ENSNLEG00000013092) #9 ACTR10 (ENSNLEG00000013052) #10 ARMH4 (ENSNLEG00000013033) #11 SLC35F4 (ENSNLEG00000013028) #13 ENSNLEG00000013023 #14 NAA30 (ENSNLEG00000013016) #15 AP5M1 (ENSNLEG00000013007) #16 EXOC5 (ENSNLEG00000013004) #17 ENSNLEG00000031520 ENSNLEG00000036263 OTX2 (ENSNLEG00000012999) #18 TMEM260 (ENSNLEG00000012964) #19 PELI2 (ENSNLEG00000012961) #20 ENSNLEG00000007819 KTN1 (ENSNLEG00000012831) #21 TBPL2 (ENSNLEG00000012821) #22 ATG14 (ENSNLEG00000012814) #23 FBXO34 (ENSNLEG00000012813) #24 DLGAP5 (ENSNLEG00000012807) LGALS3 (ENSNLEG00000012791) #26 MAPK1IP1L (ENSNLEG00000027489) #27 SOCS4 (ENSNLEG00000012784) #28 WDHD1 (ENSNLEG00000012760) #29 GCH1 (ENSNLEG00000012744) #30 ENSNLEG00000012735 #31 CGRRF1 (ENSNLEG00000012724) #32 GMFB (ENSNLEG00000012717) #33 ENSNLEG00000032036 #34 CDKN3 (ENSNLEG00000012673) #35 ENSNLEG00000036135 BMP4 (ENSNLEG00000012666) #36 Cercopithecidae ANCESTRAL SPECIES 7 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00390000004745 ENSGT00390000017606.a.a.i.b.a.a.f.b ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00390000010799.u.b.a.a.b.o.b ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000154663.v ENSGT00390000001424.pb.a ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340.a.a #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542.i.a #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00550000074912.i.b #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00390000004745 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00390000010799.u.b.a.a.b.o.b ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000154663.v ENSGT00390000001424.pb.a ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00950000182857.a.a.b.a.r.a.b.b.a.a.d ENSGT00730000111340.a.a #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542.i.a #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 Vervet Monkey MODERN SPECIES 16 ENSCSAG00000014416 ARID4A (ENSCSAG00000014425) #8 ENSCSAG00000019412 PSMA3 (ENSCSAG00000014435) #9 ACTR10 (ENSCSAG00000014447) #10 ARMH4 (ENSCSAG00000014459) #11 SLC35F4 (ENSCSAG00000014489) #13 CCDC198 (ENSCSAG00000014503) #14 NAA30 (ENSCSAG00000014509) #15 AP5M1 (ENSCSAG00000014515) #16 EXOC5 (ENSCSAG00000014529) #17 OTX2 (ENSCSAG00000014537) #18 TMEM260 (ENSCSAG00000014554) #19 PELI2 (ENSCSAG00000014565) #20 KTN1 (ENSCSAG00000014591) #21 TBPL2 (ENSCSAG00000014616) #22 ATG14 (ENSCSAG00000014639) #23 FBXO34 (ENSCSAG00000019411) #24 DLGAP5 (ENSCSAG00000014651) LGALS3 (ENSCSAG00000014660) #26 ENSCSAG00000019410 MAPK1IP1L (ENSCSAG00000014664) #27 SOCS4 (ENSCSAG00000019409) #28 WDHD1 (ENSCSAG00000014757) #29 GCH1 (ENSCSAG00000014802) #30 SAMD4A (ENSCSAG00000014813) #31 ENSCSAG00000014820 #32 GMFB (ENSCSAG00000014825) #33 CNIH1 (ENSCSAG00000014832) #34 CDKN3 (ENSCSAG00000014837) #35 BMP4 (ENSCSAG00000014842) #36 Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00550000074912.i.b #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00390000004745 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00390000010799.u.b.a.a.b.o.b.b ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000154663.v ENSGT00390000001424.pb.a ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00950000182857.a.a.b.a.r.a.b.b.a.a.d ENSGT00730000111340.a.a #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542.i.a #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 Macaca ANCESTRAL SPECIES 1 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912.j #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00940000154663.v ENSGT00390000001424.pb.a ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00950000182857.a.a.b.a.r.a.b.b.a.a.d ENSGT00730000111340.a.a #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542.i.a #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 Pig-tailed macaque MODERN SPECIES 520 TIMM9 (ENSMNEG00000039326) #7 TOMM20L (ENSMNEG00000034572) ARID4A (ENSMNEG00000037476) #8 PSMA3 (ENSMNEG00000035144) #9 ACTR10 (ENSMNEG00000031228) #10 ARMH4 (ENSMNEG00000044040) #11 SLC35F4 (ENSMNEG00000034879) #13 CCDC198 (ENSMNEG00000034304) #14 NAA30 (ENSMNEG00000039048) #15 AP5M1 (ENSMNEG00000030435) #16 EXOC5 (ENSMNEG00000044093) #17 OTX2 (ENSMNEG00000043694) #18 TMEM260 (ENSMNEG00000034019) #19 PELI2 (ENSMNEG00000035098) #20 KTN1 (ENSMNEG00000030458) #21 TBPL2 (ENSMNEG00000035317) #22 ATG14 (ENSMNEG00000031609) #23 FBXO34 (ENSMNEG00000018599) #24 ENSMNEG00000034083 ENSMNEG00000036295 ENSMNEG00000023156 STX8 (ENSMNEG00000033142) CFAP52 (ENSMNEG00000036113) USP43 (ENSMNEG00000041367) DHRS7C (ENSMNEG00000031932) GSG1L2 (ENSMNEG00000035958) GLP2R (ENSMNEG00000044338) RCVRN (ENSMNEG00000012368) GAS7 (ENSMNEG00000037609) ENSMNEG00000026140 MYH13 (ENSMNEG00000042325) Macaca_a ANCESTRAL SPECIES 2 ENSGT01100000263539.b.a.a.a.a.a.b.a.b.a.a.b ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912.j #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00940000154663.v ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00950000182857.a.a.b.a.r.a.b.b.a.a.d ENSGT00730000111340.a.a #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542.i.a #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Crab-eating macaque MODERN SPECIES 17 TOMM20L (ENSMFAG00000036395) ARID4A (ENSMFAG00000037044) #8 ENSMFAG00000002833 #9 ACTR10 (ENSMFAG00000012469) #10 ARMH4 (ENSMFAG00000038183) #11 SLC35F4 (ENSMFAG00000001572) #13 CCDC198 (ENSMFAG00000044693) #14 NAA30 (ENSMFAG00000038073) #15 AP5M1 (ENSMFAG00000036074) #16 EXOC5 (ENSMFAG00000037256) #17 ENSMFAG00000060450 OTX2 (ENSMFAG00000033859) #18 TMEM260 (ENSMFAG00000040523) #19 PELI2 (ENSMFAG00000040947) #20 KTN1 (ENSMFAG00000043226) #21 TBPL2 (ENSMFAG00000031288) #22 ATG14 (ENSMFAG00000045831) #23 ENSMFAG00000058470 ENSMFAG00000050746 ENSMFAG00000031625 FBXO34 (ENSMFAG00000009535) #24 DLGAP5 (ENSMFAG00000035988) LGALS3 (ENSMFAG00000055901) #26 ENSMFAG00000028816 MAPK1IP1L (ENSMFAG00000044107) #27 SOCS4 (ENSMFAG00000056239) #28 WDHD1 (ENSMFAG00000032915) #29 GCH1 (ENSMFAG00000000353) #30 SAMD4A (ENSMFAG00000041636) #31 CGRRF1 (ENSMFAG00000043781) #32 CNIH1 (ENSMFAG00000042370) #34 Rhesus MODERN SPECIES 17 ARID4A (ENSMMUG00000003514) #8 PSMA3 (ENSMMUG00000003509) #9 ACTR10 (ENSMMUG00000003508) #10 ARMH4 (ENSMMUG00000002121) #11 SLC35F4 (ENSMMUG00000007646) #13 CCDC198 (ENSMMUG00000040110) #14 NAA30 (ENSMMUG00000021311) #15 AP5M1 (ENSMMUG00000018279) #16 EXOC5 (ENSMMUG00000018278) #17 ENSMMUG00000062765 OTX2 (ENSMMUG00000038006) #18 TMEM260 (ENSMMUG00000020885) #19 PELI2 (ENSMMUG00000059984) #20 ENSMMUG00000053489 KTN1 (ENSMMUG00000006650) #21 TBPL2 (ENSMMUG00000023041) #22 ATG14 (ENSMMUG00000065022) #23 ENSMMUG00000029343 FBXO34 (ENSMMUG00000023258) #24 ENSMMUG00000049334 DLGAP5 (ENSMMUG00000003567) LGALS3 (ENSMMUG00000003565) #26 MAPK1IP1L (ENSMMUG00000048372) #27 WDHD1 (ENSMMUG00000000302) #29 GCH1 (ENSMMUG00000004084) #30 SAMD4A (ENSMMUG00000010315) #31 CGRRF1 (ENSMMUG00000004594) #32 GMFB (ENSMMUG00000052273) #33 CNIH1 (ENSMMUG00000012325) #34 CDKN3 (ENSMMUG00000012323) #35 BMP4 (ENSMMUG00000000429) #36 Cercopithecinae_b ANCESTRAL SPECIES 8 ENSGT00550000074912.i.b #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00390000004745 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00390000010799.u.b.a.a.b.o.b.b ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000154663.v ENSGT00390000001424.pb.a ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340.a.a #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542.i.a #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Olive baboon MODERN SPECIES 17 ENSPANG00000041550 SLC35F4 (ENSPANG00000004316) #13 CCDC198 (ENSPANG00000022393) #14 NAA30 (ENSPANG00000024264) #15 ENSPANG00000037169 AP5M1 (ENSPANG00000017145) #16 EXOC5 (ENSPANG00000022394) #17 ENSPANG00000040753 OTX2 (ENSPANG00000045284) #18 ENSPANG00000037748 TMEM260 (ENSPANG00000004318) #19 PELI2 (ENSPANG00000009936) #20 KTN1 (ENSPANG00000015295) #21 ENSPANG00000037655 ENSPANG00000043240 TBPL2 (ENSPANG00000015296) #22 ATG14 (ENSPANG00000023985) #23 FBXO34 (ENSPANG00000014185) #24 ENSPANG00000023586 DLGAP5 (ENSPANG00000023585) LGALS3 (ENSPANG00000004321) #26 MAPK1IP1L (ENSPANG00000018091) #27 SOCS4 (ENSPANG00000018402) #28 WDHD1 (ENSPANG00000017506) #29 GCH1 (ENSPANG00000015150) #30 SAMD4A (ENSPANG00000004323) #31 ENSPANG00000021096 #32 GMFB (ENSPANG00000034040) #33 CNIH1 (ENSPANG00000022395) #34 CDKN3 (ENSPANG00000015151) #35 ENSPANG00000038701 Cercopithecinae_d ANCESTRAL SPECIES 28 ENSGT00940000156159 #8 ENSGT00550000074912.i.b #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00390000010799.u.b.a.a.b.o.b.b ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000154663.v ENSGT00390000001424.pb.a ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340.a.a #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542.i.a #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Sooty mangabey MODERN SPECIES 659 ACTR10 (ENSCATG00000031164) #10 ARMH4 (ENSCATG00000040941) #11 SLC35F4 (ENSCATG00000009372) #13 CCDC198 (ENSCATG00000004038) #14 NAA30 (ENSCATG00000013934) #15 AP5M1 (ENSCATG00000044165) #16 ENSCATG00000039283 EXOC5 (ENSCATG00000037587) #17 OTX2 (ENSCATG00000041601) #18 ENSCATG00000000491 ENSCATG00000042898 TMEM260 (ENSCATG00000045192) #19 ENSCATG00000004633 PELI2 (ENSCATG00000031342) #20 KTN1 (ENSCATG00000030333) #21 TBPL2 (ENSCATG00000039794) #22 ATG14 (ENSCATG00000031799) #23 FBXO34 (ENSCATG00000016185) #24 ENSCATG00000038053 ENSCATG00000041587 DLGAP5 (ENSCATG00000040010) LGALS3 (ENSCATG00000044749) #26 ENSCATG00000030277 ENSCATG00000029186 #27 SOCS4 (ENSCATG00000022174) #28 WDHD1 (ENSCATG00000035221) #29 GCH1 (ENSCATG00000014083) #30 SAMD4A (ENSCATG00000043489) #31 ENSCATG00000029605 #32 GMFB (ENSCATG00000029526) #33 CNIH1 (ENSCATG00000026544) #34 Drill MODERN SPECIES 1310 ENSMLEG00000022777 PELI2 (ENSMLEG00000029689) #20 ENSMLEG00000039321 KTN1 (ENSMLEG00000035190) #21 TBPL2 (ENSMLEG00000032077) #22 ATG14 (ENSMLEG00000030693) #23 FBXO34 (ENSMLEG00000027651) #24 ENSMLEG00000034307 ENSMLEG00000037710 DLGAP5 (ENSMLEG00000028124) LGALS3 (ENSMLEG00000040161) #26 ENSMLEG00000036018 #27 SOCS4 (ENSMLEG00000001561) #28 WDHD1 (ENSMLEG00000035661) #29 GCH1 (ENSMLEG00000040763) #30 SAMD4A (ENSMLEG00000037282) #31 ENSMLEG00000040467 #32 GMFB (ENSMLEG00000028861) #33 CNIH1 (ENSMLEG00000033502) #34 CDKN3 (ENSMLEG00000036368) #35 Rhinopithecus ANCESTRAL SPECIES 78 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000154663.v ENSGT00390000001424.pb.a ENSGT00940000158652 ENSGT00940000157224.r #26 ENSGT00730000111340.a.a #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542.i.a #32 ENSGT00390000008920.c.a.q.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Black snub-nosed monkey MODERN SPECIES 458 ENSRBIG00000037055 KTN1 (ENSRBIG00000044537) #21 TBPL2 (ENSRBIG00000043431) #22 ATG14 (ENSRBIG00000034331) #23 FBXO34 (ENSRBIG00000030413) #24 ENSRBIG00000032278 ENSRBIG00000013868 DLGAP5 (ENSRBIG00000036589) ENSRBIG00000041453 #26 ENSRBIG00000004712 MAPK1IP1L (ENSRBIG00000024081) #27 SOCS4 (ENSRBIG00000020372) #28 WDHD1 (ENSRBIG00000036687) #29 GCH1 (ENSRBIG00000030302) #30 SAMD4A (ENSRBIG00000043506) #31 ENSRBIG00000036345 #32 ENSRBIG00000036487 MGST2 (ENSRBIG00000030111) Golden snub-nosed monkey MODERN SPECIES 1639 ENSRROG00000038972 KTN1 (ENSRROG00000045278) #21 TBPL2 (ENSRROG00000039944) #22 ATG14 (ENSRROG00000033562) #23 FBXO34 (ENSRROG00000007681) #24 ENSRROG00000032155 ENSRROG00000035095 ENSRROG00000028369 DLGAP5 (ENSRROG00000036225) ENSRROG00000041661 #26 ENSRROG00000039841 #27 SOCS4 (ENSRROG00000015397) #28 WDHD1 (ENSRROG00000006993) #29 GCH1 (ENSRROG00000044548) #30 SAMD4A (ENSRROG00000038834) #31 ENSRROG00000028966 #32 GMFB (ENSRROG00000030418) #33 CNIH1 (ENSRROG00000044418) #34 Platyrrhini ANCESTRAL SPECIES 4 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Cebidae ANCESTRAL SPECIES 3 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Cebidae_a ANCESTRAL SPECIES 31 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 ENSGT00390000013444.a.a Capuchin MODERN SPECIES 558 KTN1 (ENSCCAG00000028152) #21 TBPL2 (ENSCCAG00000023796) #22 ATG14 (ENSCCAG00000028579) #23 ENSCCAG00000024126 DLGAP5 (ENSCCAG00000020481) LGALS3 (ENSCCAG00000034472) #26 MAPK1IP1L (ENSCCAG00000030913) #27 SOCS4 (ENSCCAG00000031879) #28 WDHD1 (ENSCCAG00000018389) #29 Bolivian squirrel monkey MODERN SPECIES 80 SLC35F4 (ENSSBOG00000030364) #13 ENSSBOG00000018348 CCDC198 (ENSSBOG00000024566) #14 ENSSBOG00000031572 #15 AP5M1 (ENSSBOG00000012256) #16 EXOC5 (ENSSBOG00000025796) #17 ENSSBOG00000035034 ENSSBOG00000020321 ENSSBOG00000004829 OTX2 (ENSSBOG00000026803) #18 TMEM260 (ENSSBOG00000020251) #19 PELI2 (ENSSBOG00000021348) #20 ENSSBOG00000027121 KTN1 (ENSSBOG00000015980) #21 ENSSBOG00000015462 TBPL2 (ENSSBOG00000019809) #22 ATG14 (ENSSBOG00000030360) #23 ENSSBOG00000022471 ENSSBOG00000013816 DLGAP5 (ENSSBOG00000025617) LGALS3 (ENSSBOG00000034412) #26 ENSSBOG00000022699 MAPK1IP1L (ENSSBOG00000023553) #27 SOCS4 (ENSSBOG00000017242) #28 WDHD1 (ENSSBOG00000034847) #29 GCH1 (ENSSBOG00000025939) #30 SAMD4A (ENSSBOG00000022006) #31 CGRRF1 (ENSSBOG00000025623) #32 GMFB (ENSSBOG00000035491) #33 CNIH1 (ENSSBOG00000031293) #34 CDKN3 (ENSSBOG00000023960) #35 Marmoset MODERN SPECIES 1 NAA30 (ENSCJAG00000018629) #15 ENSCJAG00000085327 AP5M1 (ENSCJAG00000018620) #16 EXOC5 (ENSCJAG00000018592) #17 ENSCJAG00000047452 ENSCJAG00000084658 OTX2 (ENSCJAG00000018583) #18 ENSCJAG00000069931 ENSCJAG00000061076 TMEM260 (ENSCJAG00000018523) #19 ENSCJAG00000079975 ENSCJAG00000080395 PELI2 (ENSCJAG00000057280) #20 KTN1 (ENSCJAG00000018382) #21 ENSCJAG00000085644 TBPL2 (ENSCJAG00000018372) #22 ATG14 (ENSCJAG00000018362) #23 FBXO34 (ENSCJAG00000021876) #24 ENSCJAG00000071148 ENSCJAG00000080057 ENSCJAG00000085701 ENSCJAG00000086992 ENSCJAG00000076488 DLGAP5 (ENSCJAG00000018306) LGALS3 (ENSCJAG00000018296) #26 ENSCJAG00000085844 #27 SOCS4 (ENSCJAG00000018289) #28 ENSCJAG00000077756 WDHD1 (ENSCJAG00000018208) #29 GCH1 (ENSCJAG00000042456) #30 SAMD4A (ENSCJAG00000018182) #31 Mas night monkey MODERN SPECIES 273 ARMH4 (ENSANAG00000028979) #11 SLC35F4 (ENSANAG00000023234) #13 ENSANAG00000036820 CCDC198 (ENSANAG00000022556) #14 ENSANAG00000011004 NAA30 (ENSANAG00000025690) #15 ENSANAG00000019497 AP5M1 (ENSANAG00000027663) #16 EXOC5 (ENSANAG00000038073) #17 OTX2 (ENSANAG00000032626) #18 ENSANAG00000030036 TMEM260 (ENSANAG00000038375) #19 ENSANAG00000016925 PELI2 (ENSANAG00000022899) #20 KTN1 (ENSANAG00000031174) #21 TBPL2 (ENSANAG00000023060) #22 ATG14 (ENSANAG00000024345) #23 DLGAP5 (ENSANAG00000035817) LGALS3 (ENSANAG00000020743) #26 ENSANAG00000037823 #27 SOCS4 (ENSANAG00000004973) #28 WDHD1 (ENSANAG00000033347) #29 GCH1 (ENSANAG00000026548) #30 SAMD4A (ENSANAG00000036651) #31 CGRRF1 (ENSANAG00000036449) #32 GMFB (ENSANAG00000033336) #33 CNIH1 (ENSANAG00000035095) #34 CDKN3 (ENSANAG00000025185) #35 ENSANAG00000037804 BMP4 (ENSANAG00000035952) #36 ENSANAG00000032151 Tarsier MODERN SPECIES 6026 NAV2 (ENSTSYG00000002825) PNPT1 (ENSTSYG00000006536) ENSTSYG00000033390 PPP4R3B (ENSTSYG00000007700) CFAP36 (ENSTSYG00000007683) CCDC88A (ENSTSYG00000009215) ENSTSYG00000009186 MTIF2 (ENSTSYG00000000850) RPS27A (ENSTSYG00000000845) CLHC1 (ENSTSYG00000000066) ENSTSYG00000028106 TBPL2 (ENSTSYG00000005346) #22 ENSTSYG00000011615 Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a.`b #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Lemuriformes ANCESTRAL SPECIES 28 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a.`b #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Lemuriformes_a ANCESTRAL SPECIES 11 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT01010000222666 #25 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a.`b #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 ENSGT00390000013444.a.a Greater bamboo lemur MODERN SPECIES 266 ENSPSMG00000024483 ENSPSMG00000024477 SLC35F4 (ENSPSMG00000024475) #13 ENSPSMG00000024462 CCDC198 (ENSPSMG00000024454) #14 NAA30 (ENSPSMG00000024448) #15 AP5M1 (ENSPSMG00000024434) #16 EXOC5 (ENSPSMG00000024420) #17 OTX2 (ENSPSMG00000024363) #18 TMEM260 (ENSPSMG00000024355) #19 ENSPSMG00000024316 PELI2 (ENSPSMG00000024313) #20 KTN1 (ENSPSMG00000024070) #21 TBPL2 (ENSPSMG00000023568) #22 Coquerels sifaka MODERN SPECIES 951 TOMM20L (ENSPCOG00000022628) ARID4A (ENSPCOG00000013924) #8 PSMA3 (ENSPCOG00000018691) #9 ACTR10 (ENSPCOG00000023350) #10 ARMH4 (ENSPCOG00000028103) #11 SLC35F4 (ENSPCOG00000027595) #13 CCDC198 (ENSPCOG00000028624) #14 NAA30 (ENSPCOG00000022190) #15 AP5M1 (ENSPCOG00000021016) #16 EXOC5 (ENSPCOG00000020197) #17 OTX2 (ENSPCOG00000015777) #18 TMEM260 (ENSPCOG00000018860) #19 PELI2 (ENSPCOG00000021651) #20 ENSPCOG00000014446 KTN1 (ENSPCOG00000027740) #21 TBPL2 (ENSPCOG00000017685) #22 ENSPCOG00000027400 ATG14 (ENSPCOG00000028474) #23 ENSPCOG00000013066 #25 ENSPCOG00000013527 LGALS3 (ENSPCOG00000015312) #26 MAPK1IP1L (ENSPCOG00000025168) #27 SOCS4 (ENSPCOG00000010117) #28 WDHD1 (ENSPCOG00000027802) #29 GCH1 (ENSPCOG00000005670) #30 SAMD4A (ENSPCOG00000023339) #31 CGRRF1 (ENSPCOG00000015848) #32 GMFB (ENSPCOG00000018695) #33 CNIH1 (ENSPCOG00000019075) #34 CDKN3 (ENSPCOG00000028559) #35 BMP4 (ENSPCOG00000026776) #36 Mouse lemur MODERN SPECIES 22 AP4S1 (ENSMICG00000003359) HECTD1 (ENSMICG00000034057) HEATR5A (ENSMICG00000007619) DTD2 (ENSMICG00000030584) ENSMICG00000027167 NUBPL (ENSMICG00000034340) ARHGAP5 (ENSMICG00000007275) AKAP6 (ENSMICG00000027865) NPAS3 (ENSMICG00000031841) EGLN3 (ENSMICG00000000618) ENSMICG00000047011 ENSMICG00000032213 SPTSSA (ENSMICG00000046623) EAPP (ENSMICG00000044807) KTN1 (ENSMICG00000032329) #21 TBPL2 (ENSMICG00000000943) #22 ATG14 (ENSMICG00000000939) #23 ENSMICG00000041981 ENSMICG00000042184 DLGAP5 (ENSMICG00000016289) LGALS3 (ENSMICG00000016283) #26 MAPK1IP1L (ENSMICG00000035738) #27 SOCS4 (ENSMICG00000047239) #28 WDHD1 (ENSMICG00000016239) #29 GCH1 (ENSMICG00000016234) #30 SAMD4A (ENSMICG00000016212) #31 CGRRF1 (ENSMICG00000047854) #32 ENSMICG00000026534 #33 ENSMICG00000032621 #34 CDKN3 (ENSMICG00000016195) #35 BMP4 (ENSMICG00000011855) #36 Bushbaby MODERN SPECIES 196 ARID4A (ENSOGAG00000000385) #8 PSMA3 (ENSOGAG00000000382) #9 ENSOGAG00000000380 #10 ARMH4 (ENSOGAG00000013277) #11 SLC35F4 (ENSOGAG00000008907) #13 CCDC198 (ENSOGAG00000017021) #14 NAA30 (ENSOGAG00000017020) #15 ENSOGAG00000031518 AP5M1 (ENSOGAG00000014952) #16 EXOC5 (ENSOGAG00000014948) #17 OTX2 (ENSOGAG00000006981) #18 TMEM260 (ENSOGAG00000006976) #19 PELI2 (ENSOGAG00000001234) #20 KTN1 (ENSOGAG00000015043) #21 ENSOGAG00000032625 TBPL2 (ENSOGAG00000030735) #22 ATG14 (ENSOGAG00000015413) #23 FBXO34 (ENSOGAG00000015412) #24 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Eulipotyphla ANCESTRAL SPECIES 1249 ENSGT00940000159561 #22 ENSGT00390000011854 #23 Common shrew MODERN SPECIES 1893 TBPL2 (ENSSARG00000002412) #22 ENSSARG00000002364 #23 Hedgehog MODERN SPECIES 7447 TBPL2 (ENSEEUG00000008616) #22 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00390000017305 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00390000017305 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Suina ANCESTRAL SPECIES 30 ENSGT00940000165313 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Pig MODERN SPECIES ARMH4 (ENSSSCG00000005071) #11 ENSSSCG00000054505 SLC35F4 (ENSSSCG00000005068) #13 ENSSSCG00000052032 CCDC198 (ENSSSCG00000005067) #14 NAA30 (ENSSSCG00000031332) #15 ENSSSCG00000057475 ENSSSCG00000055062 AP5M1 (ENSSSCG00000005065) #16 EXOC5 (ENSSSCG00000005066) #17 OTX2 (ENSSSCG00000005063) #18 TMEM260 (ENSSSCG00000005062) #19 ENSSSCG00000045820 PELI2 (ENSSSCG00000033800) #20 KTN1 (ENSSSCG00000005060) #21 TBPL2 (ENSSSCG00000005059) #22 ATG14 (ENSSSCG00000005058) #23 FBXO34 (ENSSSCG00000005057) #24 DLGAP5 (ENSSSCG00000005056) LGALS3 (ENSSSCG00000005055) #26 MAPK1IP1L (ENSSSCG00000005054) #27 SOCS4 (ENSSSCG00000032332) #28 WDHD1 (ENSSSCG00000005052) #29 GCH1 (ENSSSCG00000035715) #30 SAMD4A (ENSSSCG00000023408) #31 CGRRF1 (ENSSSCG00000021451) #32 GMFB (ENSSSCG00000026294) #33 CNIH1 (ENSSSCG00000027256) #34 CDKN3 (ENSSSCG00000005047) #35 BMP4 (ENSSSCG00000005045) #36 DDHD1 (ENSSSCG00000005043) Chacoan peccary MODERN SPECIES 785 TIMM9 (ENSCWAG00000007380) #7 TOMM20L (ENSCWAG00000007414) ARID4A (ENSCWAG00000007451) #8 PSMA3 (ENSCWAG00000007528) #9 ACTR10 (ENSCWAG00000007576) #10 ARMH4 (ENSCWAG00000007602) #11 SLC35F4 (ENSCWAG00000007638) #13 CCDC198 (ENSCWAG00000007702) #14 NAA30 (ENSCWAG00000007778) #15 AP5M1 (ENSCWAG00000007815) #16 EXOC5 (ENSCWAG00000007866) #17 ENSCWAG00000007953 TMEM260 (ENSCWAG00000007995) #19 PELI2 (ENSCWAG00000008094) #20 KTN1 (ENSCWAG00000008232) #21 TBPL2 (ENSCWAG00000009986) #22 ATG14 (ENSCWAG00000010041) #23 FBXO34 (ENSCWAG00000010117) #24 DLGAP5 (ENSCWAG00000010138) LGALS3 (ENSCWAG00000010186) #26 MAPK1IP1L (ENSCWAG00000010227) #27 SOCS4 (ENSCWAG00000010261) #28 WDHD1 (ENSCWAG00000010287) #29 GCH1 (ENSCWAG00000010495) #30 SAMD4A (ENSCWAG00000010550) #31 CGRRF1 (ENSCWAG00000010651) #32 GMFB (ENSCWAG00000010680) #33 CNIH1 (ENSCWAG00000010737) #34 CDKN3 (ENSCWAG00000010900) #35 BMP4 (ENSCWAG00000011680) #36 DDHD1 (ENSCWAG00000011731) Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00390000017305 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Camelidae ANCESTRAL SPECIES 8 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00390000017305 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Arabian camel MODERN SPECIES 32 PSMA3 (ENSCDRG00005003904) #9 ACTR10 (ENSCDRG00005003798) #10 ARMH4 (ENSCDRG00005003753) #11 SLC35F4 (ENSCDRG00005003636) #13 CCDC198 (ENSCDRG00005003594) #14 NAA30 (ENSCDRG00005003560) #15 AP5M1 (ENSCDRG00005003511) #16 EXOC5 (ENSCDRG00005003347) #17 OTX2 (ENSCDRG00005003304) #18 ENSCDRG00005003291 TMEM260 (ENSCDRG00005003273) #19 ENSCDRG00005003257 ENSCDRG00005003243 PELI2 (ENSCDRG00005003235) #20 KTN1 (ENSCDRG00005002748) #21 TBPL2 (ENSCDRG00005002602) #22 ATG14 (ENSCDRG00005002589) #23 FBXO34 (ENSCDRG00005002574) #24 DLGAP5 (ENSCDRG00005002556) LGALS3 (ENSCDRG00005002528) #26 ENSCDRG00005002516 MAPK1IP1L (ENSCDRG00005002501) #27 SOCS4 (ENSCDRG00005002490) #28 WDHD1 (ENSCDRG00005002444) #29 GCH1 (ENSCDRG00005002407) #30 SAMD4A (ENSCDRG00005002374) #31 CGRRF1 (ENSCDRG00005002347) #32 GMFB (ENSCDRG00005002332) #33 CNIH1 (ENSCDRG00005002277) #34 CDKN3 (ENSCDRG00005002199) #35 BMP4 (ENSCDRG00005002167) #36 Alpaca MODERN SPECIES 4946 PELI2 (ENSVPAG00000000960) #20 KTN1 (ENSVPAG00000000959) #21 ENSVPAG00000000958 TBPL2 (ENSVPAG00000000957) #22 ATG14 (ENSVPAG00000000956) #23 DLGAP5 (ENSVPAG00000000954) Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Pecora ANCESTRAL SPECIES 6 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Percora_a ANCESTRAL SPECIES 8 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Bovidae ANCESTRAL SPECIES 7 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a.x #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Caprinae ANCESTRAL SPECIES 11 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014.rb.a #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a.x #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Goat MODERN SPECIES 1 TOMM20L (ENSCHIG00000023817) ARID4A (ENSCHIG00000021589) #8 PSMA3 (ENSCHIG00000016692) #9 ACTR10 (ENSCHIG00000025582) #10 ARMH4 (ENSCHIG00000011182) #11 SLC35F4 (ENSCHIG00000023214) #13 CCDC198 (ENSCHIG00000027108) #14 NAA30 (ENSCHIG00000014880) #15 AP5M1 (ENSCHIG00000017238) #16 EXOC5 (ENSCHIG00000021413) #17 OTX2 (ENSCHIG00000011465) #18 TMEM260 (ENSCHIG00000018277) #19 ENSCHIG00000021274 PELI2 (ENSCHIG00000015413) #20 KTN1 (ENSCHIG00000025347) #21 TBPL2 (ENSCHIG00000026824) #22 ATG14 (ENSCHIG00000015773) #23 DLGAP5 (ENSCHIG00000017688) LGALS3 (ENSCHIG00000011567) #26 MAPK1IP1L (ENSCHIG00000015375) #27 SOCS4 (ENSCHIG00000008618) #28 WDHD1 (ENSCHIG00000017956) #29 GCH1 (ENSCHIG00000018987) #30 SAMD4A (ENSCHIG00000016091) #31 CGRRF1 (ENSCHIG00000023916) #32 GMFB (ENSCHIG00000022138) #33 CNIH1 (ENSCHIG00000021943) #34 CDKN3 (ENSCHIG00000010569) #35 BMP4 (ENSCHIG00000021149) #36 ENSCHIG00000008708 DDHD1 (ENSCHIG00000025888) Rambouillet Sheep MODERN SPECIES 23 ARID4A (ENSOARG00020020842) #8 PSMA3 (ENSOARG00020020746) #9 ACTR10 (ENSOARG00020020638) #10 ENSOARG00020020575 ARMH4 (ENSOARG00020020459) #11 SLC35F4 (ENSOARG00020020338) #13 ENSOARG00020020321 CCDC198 (ENSOARG00020020200) #14 NAA30 (ENSOARG00020020150) #15 AP5M1 (ENSOARG00020020008) #16 EXOC5 (ENSOARG00020019509) #17 OTX2 (ENSOARG00020019426) #18 ENSOARG00020019111 #19 PELI2 (ENSOARG00020019043) #20 KTN1 (ENSOARG00020017183) #21 TBPL2 (ENSOARG00020016918) #22 ATG14 (ENSOARG00020016704) #23 FBXO34 (ENSOARG00020016670) #24 DLGAP5 (ENSOARG00020016493) LGALS3 (ENSOARG00020016446) #26 MAPK1IP1L (ENSOARG00020016392) #27 SOCS4 (ENSOARG00020016372) #28 WDHD1 (ENSOARG00020016059) #29 GCH1 (ENSOARG00020015916) #30 SAMD4A (ENSOARG00020015503) #31 CGRRF1 (ENSOARG00020015430) #32 GMFB (ENSOARG00020015342) #33 CNIH1 (ENSOARG00020015091) #34 CDKN3 (ENSOARG00020014749) #35 BMP4 (ENSOARG00020014655) #36 DDHD1 (ENSOARG00020013495) Bovinae ANCESTRAL SPECIES 11 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a.x #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Bos ANCESTRAL SPECIES 13 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a.x #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT01030000234574.B.c.a.b Bos_a ANCESTRAL SPECIES 1 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a.x #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT01030000234574.B.c.a.b Wild yak MODERN SPECIES 1732 TBPL2 (ENSBMUG00000009785) #22 ATG14 (ENSBMUG00000009811) #23 FBXO34 (ENSBMUG00000009822) #24 DLGAP5 (ENSBMUG00000009850) LGALS3 (ENSBMUG00000009866) #26 MAPK1IP1L (ENSBMUG00000009871) #27 SOCS4 (ENSBMUG00000009882) #28 WDHD1 (ENSBMUG00000009904) #29 GCH1 (ENSBMUG00000009964) #30 SAMD4A (ENSBMUG00000010100) #31 CGRRF1 (ENSBMUG00000010131) #32 GMFB (ENSBMUG00000010144) #33 CNIH1 (ENSBMUG00000010216) #34 Domestic yak MODERN SPECIES 2 TOMM20L (ENSBGRG00000006358) ARID4A (ENSBGRG00000006268) #8 PSMA3 (ENSBGRG00000006071) #9 ACTR10 (ENSBGRG00000006018) #10 ARMH4 (ENSBGRG00000005926) #11 SLC35F4 (ENSBGRG00000005871) #13 CCDC198 (ENSBGRG00000005763) #14 NAA30 (ENSBGRG00000005732) #15 AP5M1 (ENSBGRG00000005692) #16 EXOC5 (ENSBGRG00000005408) #17 OTX2 (ENSBGRG00000005329) #18 TMEM260 (ENSBGRG00000004946) #19 ENSBGRG00000004886 PELI2 (ENSBGRG00000004832) #20 KTN1 (ENSBGRG00000004134) #21 TBPL2 (ENSBGRG00000004017) #22 ATG14 (ENSBGRG00000003787) #23 FBXO34 (ENSBGRG00000003724) #24 DLGAP5 (ENSBGRG00000003622) LGALS3 (ENSBGRG00000024654) #26 MAPK1IP1L (ENSBGRG00000024622) #27 SOCS4 (ENSBGRG00000024612) #28 WDHD1 (ENSBGRG00000024184) #29 ENSBGRG00000023979 #30 SAMD4A (ENSBGRG00000023839) #31 CGRRF1 (ENSBGRG00000023733) #32 GMFB (ENSBGRG00000023690) #33 CNIH1 (ENSBGRG00000023478) #34 CDKN3 (ENSBGRG00000022709) #35 ENSBGRG00000022641 BMP4 (ENSBGRG00000022589) #36 Bos_b ANCESTRAL SPECIES 11 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a.x #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT01030000234574.B.c.a.b Hybrid Bos Indicus MODERN SPECIES 1 ACTR10 (ENSBIXG00005000870) #10 ENSBIXG00005010405 ARMH4 (ENSBIXG00005010427) #11 SLC35F4 (ENSBIXG00005010483) #13 CCDC198 (ENSBIXG00005010538) #14 NAA30 (ENSBIXG00005010568) #15 AP5M1 (ENSBIXG00005000698) #16 EXOC5 (ENSBIXG00005010619) #17 OTX2 (ENSBIXG00005010652) #18 TMEM260 (ENSBIXG00005006780) #19 ENSBIXG00005010907 ENSBIXG00005010923 ENSBIXG00005000589 PELI2 (ENSBIXG00005000985) #20 KTN1 (ENSBIXG00005011805) #21 TBPL2 (ENSBIXG00005011981) #22 ATG14 (ENSBIXG00005005821) #23 FBXO34 (ENSBIXG00005012099) #24 DLGAP5 (ENSBIXG00005012158) LGALS3 (ENSBIXG00005012181) #26 ENSBIXG00005001258 MAPK1IP1L (ENSBIXG00005005824) #27 SOCS4 (ENSBIXG00005012221) #28 WDHD1 (ENSBIXG00005012265) #29 GCH1 (ENSBIXG00005012299) #30 SAMD4A (ENSBIXG00005001301) #31 CGRRF1 (ENSBIXG00005001312) #32 GMFB (ENSBIXG00005012386) #33 CNIH1 (ENSBIXG00005012495) #34 ENSBIXG00005012544 #35 BMP4 (ENSBIXG00005006112) #36 Cow MODERN SPECIES 1 TOMM20L (ENSBTAG00000052431) ARID4A (ENSBTAG00000018898) #8 PSMA3 (ENSBTAG00000002808) #9 ACTR10 (ENSBTAG00000014392) #10 ARMH4 (ENSBTAG00000020880) #11 SLC35F4 (ENSBTAG00000006341) #13 CCDC198 (ENSBTAG00000009862) #14 NAA30 (ENSBTAG00000012998) #15 AP5M1 (ENSBTAG00000013043) #16 EXOC5 (ENSBTAG00000013042) #17 ENSBTAG00000051793 OTX2 (ENSBTAG00000014741) #18 TMEM260 (ENSBTAG00000030881) #19 PELI2 (ENSBTAG00000005141) #20 KTN1 (ENSBTAG00000017713) #21 TBPL2 (ENSBTAG00000018277) #22 ATG14 (ENSBTAG00000010795) #23 ENSBTAG00000051943 FBXO34 (ENSBTAG00000020533) #24 DLGAP5 (ENSBTAG00000002331) LGALS3 (ENSBTAG00000002326) #26 MAPK1IP1L (ENSBTAG00000021986) #27 SOCS4 (ENSBTAG00000021988) #28 WDHD1 (ENSBTAG00000019120) #29 GCH1 (ENSBTAG00000040151) #30 SAMD4A (ENSBTAG00000001468) #31 CGRRF1 (ENSBTAG00000017141) #32 GMFB (ENSBTAG00000054095) #33 CNIH1 (ENSBTAG00000019500) #34 CDKN3 (ENSBTAG00000019496) #35 BMP4 (ENSBTAG00000003835) #36 American bison MODERN SPECIES 3170 ACTR10 (ENSBBBG00000020095) #10 ARMH4 (ENSBBBG00000008369) #11 ENSBBBG00000020068 SLC35F4 (ENSBBBG00000005428) #13 CCDC198 (ENSBBBG00000005091) #14 ENSBBBG00000020043 #15 AP5M1 (ENSBBBG00000020032) #16 EXOC5 (ENSBBBG00000020012) #17 ENSBBBG00000007439 ENSBBBG00000019961 TMEM260 (ENSBBBG00000005126) #19 PELI2 (ENSBBBG00000005390) #20 ENSBBBG00000019867 ENSBBBG00000019861 KTN1 (ENSBBBG00000005359) #21 TBPL2 (ENSBBBG00000019082) #22 ATG14 (ENSBBBG00000019076) #23 FBXO34 (ENSBBBG00000019056) #24 DLGAP5 (ENSBBBG00000008355) LGALS3 (ENSBBBG00000004851) #26 MAPK1IP1L (ENSBBBG00000018974) #27 SOCS4 (ENSBBBG00000004821) #28 WDHD1 (ENSBBBG00000004815) #29 GCH1 (ENSBBBG00000018927) #30 SAMD4A (ENSBBBG00000004789) #31 CGRRF1 (ENSBBBG00000018871) #32 GMFB (ENSBBBG00000018858) #33 CNIH1 (ENSBBBG00000018822) #34 CDKN3 (ENSBBBG00000018754) #35 BMP4 (ENSBBBG00000018643) #36 DDHD1 (ENSBBBG00000004625) Siberian musk deer MODERN SPECIES 257 TMEM260 (ENSMMSG00000006329) #19 PELI2 (ENSMMSG00000006292) #20 KTN1 (ENSMMSG00000004871) #21 TBPL2 (ENSMMSG00000004490) #22 ATG14 (ENSMMSG00000004466) #23 FBXO34 (ENSMMSG00000004454) #24 DLGAP5 (ENSMMSG00000004423) LGALS3 (ENSMMSG00000004398) #26 MAPK1IP1L (ENSMMSG00000013588) #27 SOCS4 (ENSMMSG00000013584) #28 WDHD1 (ENSMMSG00000013473) #29 GCH1 (ENSMMSG00000013426) #30 SAMD4A (ENSMMSG00000013364) #31 CGRRF1 (ENSMMSG00000013338) #32 ENSMMSG00000013332 GMFB (ENSMMSG00000013304) #33 ENSMMSG00000013239 #34 ENSMMSG00000013129 #35 BMP4 (ENSMMSG00000013092) #36 Yarkand deer MODERN SPECIES 3 ENSCHYG00000006747 ARMH4 (ENSCHYG00000006690) #11 ENSCHYG00000006672 SLC35F4 (ENSCHYG00000006593) #13 CCDC198 (ENSCHYG00000006562) #14 NAA30 (ENSCHYG00000006525) #15 AP5M1 (ENSCHYG00000006463) #16 EXOC5 (ENSCHYG00000006373) #17 ENSCHYG00000006338 OTX2 (ENSCHYG00000006298) #18 TMEM260 (ENSCHYG00000006158) #19 ENSCHYG00000006139 PELI2 (ENSCHYG00000006092) #20 ENSCHYG00000006063 KTN1 (ENSCHYG00000016827) #21 TBPL2 (ENSCHYG00000016629) #22 ATG14 (ENSCHYG00000016469) #23 FBXO34 (ENSCHYG00000016434) #24 ENSCHYG00000016406 DLGAP5 (ENSCHYG00000016132) LGALS3 (ENSCHYG00000015987) #26 MAPK1IP1L (ENSCHYG00000015882) #27 SOCS4 (ENSCHYG00000015826) #28 WDHD1 (ENSCHYG00000015390) #29 GCH1 (ENSCHYG00000015214) #30 ENSCHYG00000015111 SAMD4A (ENSCHYG00000014855) #31 CGRRF1 (ENSCHYG00000014731) #32 GMFB (ENSCHYG00000014201) #33 ENSCHYG00000013842 #35 BMP4 (ENSCHYG00000013745) #36 Cetacea ANCESTRAL SPECIES 2 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00940000155478.bb.b.b ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a.g.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Blue whale MODERN SPECIES 11 TOMM20L (ENSBMSG00010006639) ARID4A (ENSBMSG00010006597) #8 PSMA3 (ENSBMSG00010006547) #9 ACTR10 (ENSBMSG00010006532) #10 ARMH4 (ENSBMSG00010006512) #11 SLC35F4 (ENSBMSG00010006486) #13 CCDC198 (ENSBMSG00010006460) #14 NAA30 (ENSBMSG00010006423) #15 EXOC5 (ENSBMSG00010006288) #17 ENSBMSG00010006244 #18 TMEM260 (ENSBMSG00010006197) #19 PELI2 (ENSBMSG00010006118) #20 ENSBMSG00010006103 ENSBMSG00010006087 KTN1 (ENSBMSG00010005998) #21 TBPL2 (ENSBMSG00010005889) #22 ATG14 (ENSBMSG00010005829) #23 FBXO34 (ENSBMSG00010005804) #24 ENSBMSG00010005771 #25 LGALS3 (ENSBMSG00010005740) #26 ENSBMSG00010005724 MAPK1IP1L (ENSBMSG00010005701) #27 SOCS4 (ENSBMSG00010005678) #28 WDHD1 (ENSBMSG00010005666) #29 GCH1 (ENSBMSG00010005645) #30 SAMD4A (ENSBMSG00010005603) #31 CGRRF1 (ENSBMSG00010005565) #32 ENSBMSG00010005542 #33 CNIH1 (ENSBMSG00010005508) #34 CDKN3 (ENSBMSG00010005456) #35 ENSBMSG00010005415 Odontoceti ANCESTRAL SPECIES 2 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00940000155478.bb.b.b ENSGT00950000182901.a.a.a.b.b.b ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a.g.b #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 13 PWWP3B (ENSPCTG00005008132) SERPINA7 (ENSPCTG00005008118) NRK (ENSPCTG00005007955) IL1RAPL2 (ENSPCTG00005007879) ESX1 (ENSPCTG00005007852) FAM199X (ENSPCTG00005007842) ZCCHC18 (ENSPCTG00005007835) SLC25A53 (ENSPCTG00005007827) ENSPCTG00005007819 ENSPCTG00005007809 ENSPCTG00005007797 ENSPCTG00005007785 ENSPCTG00005007772 ENSPCTG00005007762 ENSPCTG00005007751 ENSPCTG00005007742 #22 RAB9B (ENSPCTG00005007694) PLP1 (ENSPCTG00005007649) TMEM31 (ENSPCTG00005007632) ENSPCTG00005007607 MORF4L2 (ENSPCTG00005007597) ENSPCTG00005007578 ENSPCTG00005007557 TCEAL1 (ENSPCTG00005007540) ENSPCTG00005007523 ENSPCTG00005007474 ENSPCTG00005007454 ENSPCTG00005007414 BEX4 (ENSPCTG00005007397) TCEAL8 (ENSPCTG00005007389) ENSPCTG00005007356 Sperm whale MODERN SPECIES 2 TIMM9 (ENSPCTG00005005709) #7 ARID4A (ENSPCTG00005005643) #8 ENSPCTG00005005585 #9 ACTR10 (ENSPCTG00005022758) #10 ARMH4 (ENSPCTG00005022756) #11 SLC35F4 (ENSPCTG00005022755) #13 CCDC198 (ENSPCTG00005022752) #14 NAA30 (ENSPCTG00005022750) #15 AP5M1 (ENSPCTG00005022748) #16 EXOC5 (ENSPCTG00005022744) #17 OTX2 (ENSPCTG00005022740) #18 TMEM260 (ENSPCTG00005022736) #19 PELI2 (ENSPCTG00005022734) #20 KTN1 (ENSPCTG00005022715) #21 ENSPCTG00005022708 TBPL2 (ENSPCTG00005022707) #22 ATG14 (ENSPCTG00005022705) #23 FBXO34 (ENSPCTG00005022704) #24 DLGAP5 (ENSPCTG00005022701) LGALS3 (ENSPCTG00005022698) #26 ENSPCTG00005022696 ENSPCTG00005022694 MAPK1IP1L (ENSPCTG00005022693) #27 SOCS4 (ENSPCTG00005022691) #28 WDHD1 (ENSPCTG00005022686) #29 GCH1 (ENSPCTG00005022684) #30 SAMD4A (ENSPCTG00005022681) #31 CGRRF1 (ENSPCTG00005022680) #32 GMFB (ENSPCTG00005022677) #33 CNIH1 (ENSPCTG00005022675) #34 CDKN3 (ENSPCTG00005022672) #35 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00940000155478.bb.b.b ENSGT00950000182901.a.a.a.b.b.b ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a.h #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Dolphin MODERN SPECIES 6372 TBPL2 (ENSTTRG00000002034) #22 ATG14 (ENSTTRG00000002032) #23 FBXO34 (ENSTTRG00000002027) #24 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912.h #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00940000155478.bb.b.b ENSGT00950000182901.a.a.a.b.b.b ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a.h #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Monodontidae ANCESTRAL SPECIES 11 ENSGT00940000156162.C.k ENSGT00390000018829.g.b.c.a.a ENSGT00940000160614 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000154663.q ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00940000155478.bb.b.b ENSGT00950000182901.a.a.a.b.b.b ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a.g.b #33 ENSGT00950000182834.A.a.a.s #34 ENSGT00390000004717 #35 Beluga whale MODERN SPECIES 44 PSMA3 (ENSDLEG00000006602) #9 ACTR10 (ENSDLEG00000006658) #10 CUNH14orf37 (ENSDLEG00000006671) #11 SLC35F4 (ENSDLEG00000006679) #13 CCDC198 (ENSDLEG00000006725) #14 NAA30 (ENSDLEG00000006734) #15 AP5M1 (ENSDLEG00000006746) #16 EXOC5 (ENSDLEG00000006751) #17 ENSDLEG00000006814 OTX2 (ENSDLEG00000006819) #18 TMEM260 (ENSDLEG00000006827) #19 PELI2 (ENSDLEG00000006843) #20 ENSDLEG00000006850 KTN1 (ENSDLEG00000006868) #21 ENSDLEG00000006961 TBPL2 (ENSDLEG00000006963) #22 ATG14 (ENSDLEG00000006979) #23 FBXO34 (ENSDLEG00000006987) #24 DLGAP5 (ENSDLEG00000006991) LGALS3 (ENSDLEG00000007025) #26 WDHD1 (ENSDLEG00000007038) #29 ENSDLEG00000007055 ENSDLEG00000007058 MAPK1IP1L (ENSDLEG00000007080) #27 SOCS4 (ENSDLEG00000007089) #28 GCH1 (ENSDLEG00000007091) #30 SAMD4A (ENSDLEG00000007119) #31 CGRRF1 (ENSDLEG00000007156) #32 GMFB (ENSDLEG00000007201) #33 ENSDLEG00000007214 #34 CDKN3 (ENSDLEG00000007222) #35 Narwhal DUPLICATION Narwhal MODERN SPECIES 309 MORC4 (ENSMMNG00015016760) CLDN2 (ENSMMNG00015016732) RIPPLY1 (ENSMMNG00015016695) TBC1D8B (ENSMMNG00015016610) RNF128 (ENSMMNG00015016539) RADX (ENSMMNG00015016456) ENSMMNG00015016416 PWWP3B (ENSMMNG00015016397) SERPINA7 (ENSMMNG00015016376) NRK (ENSMMNG00015016315) IL1RAPL2 (ENSMMNG00015016224) FAM199X (ENSMMNG00015016204) ENSMMNG00015016189 SLC25A53 (ENSMMNG00015016181) ENSMMNG00015016157 ENSMMNG00015016134 #22 RAB9B (ENSMMNG00015016117) PLP1 (ENSMMNG00015016059) TMEM31 (ENSMMNG00015016026) ENSMMNG00015015974 MORF4L2 (ENSMMNG00015015952) ENSMMNG00015015944 ENSMMNG00015015927 ENSMMNG00015015897 ENSMMNG00015015872 ENSMMNG00015015854 ENSMMNG00015015841 ENSMMNG00015015823 TCEAL7 (ENSMMNG00015015804) TCEAL9 (ENSMMNG00015015789) GPRASP2 (ENSMMNG00015015763) Narwhal MODERN SPECIES 308 KIAA0586 (ENSMMNG00015010227) ARID4A (ENSMMNG00015010145) #8 PSMA3 (ENSMMNG00015010058) #9 ENSMMNG00015010047 #10 ARMH4 (ENSMMNG00015010028) #11 SLC35F4 (ENSMMNG00015010003) #13 CCDC198 (ENSMMNG00015009993) #14 NAA30 (ENSMMNG00015019499) #15 AP5M1 (ENSMMNG00015019394) #16 EXOC5 (ENSMMNG00015019327) #17 ENSMMNG00015019287 OTX2 (ENSMMNG00015019252) #18 TMEM260 (ENSMMNG00015019211) #19 PELI2 (ENSMMNG00015019176) #20 KTN1 (ENSMMNG00015018038) #21 TBPL2 (ENSMMNG00015017587) #22 ATG14 (ENSMMNG00015017545) #23 FBXO34 (ENSMMNG00015017528) #24 DLGAP5 (ENSMMNG00015017479) LGALS3 (ENSMMNG00015017442) #26 ENSMMNG00015017426 MAPK1IP1L (ENSMMNG00015017408) #27 SOCS4 (ENSMMNG00015017397) #28 WDHD1 (ENSMMNG00015017368) #29 GCH1 (ENSMMNG00015017294) #30 SAMD4A (ENSMMNG00015017239) #31 CGRRF1 (ENSMMNG00015017201) #32 GMFB (ENSMMNG00015017167) #33 ENSMMNG00015017093 #34 CDKN3 (ENSMMNG00015016910) #35 BMP4 (ENSMMNG00015016843) #36 Vaquita DUPLICATION Vaquita MODERN SPECIES 34 CLDN2 (ENSPSNG00000017570) RIPPLY1 (ENSPSNG00000017501) TBC1D8B (ENSPSNG00000017412) RNF128 (ENSPSNG00000017301) ENSPSNG00000017227 RADX (ENSPSNG00000017160) PWWP3B (ENSPSNG00000017134) SERPINA7 (ENSPSNG00000017079) NRK (ENSPSNG00000016651) IL1RAPL2 (ENSPSNG00000016439) FAM199X (ENSPSNG00000016305) ENSPSNG00000016276 SLC25A53 (ENSPSNG00000016256) ENSPSNG00000016202 ENSPSNG00000016187 ENSPSNG00000016160 #22 RAB9B (ENSPSNG00000016142) PLP1 (ENSPSNG00000015963) TMEM31 (ENSPSNG00000015906) ENSPSNG00000015772 MORF4L2 (ENSPSNG00000015721) ENSPSNG00000015620 TCEAL1 (ENSPSNG00000015582) ENSPSNG00000015549 ENSPSNG00000015517 ENSPSNG00000015091 ENSPSNG00000014916 ENSPSNG00000014889 ENSPSNG00000014680 ENSPSNG00000014607 BEX4 (ENSPSNG00000014586) Vaquita MODERN SPECIES 11 KIAA0586 (ENSPSNG00000008812) TIMM9 (ENSPSNG00000008723) #7 ARID4A (ENSPSNG00000008518) #8 ENSPSNG00000008426 #9 ACTR10 (ENSPSNG00000008378) #10 ARMH4 (ENSPSNG00000008345) #11 SLC35F4 (ENSPSNG00000008233) #13 CCDC198 (ENSPSNG00000008124) #14 NAA30 (ENSPSNG00000008083) #15 AP5M1 (ENSPSNG00000008044) #16 EXOC5 (ENSPSNG00000007938) #17 OTX2 (ENSPSNG00000007834) #18 TMEM260 (ENSPSNG00000007769) #19 PELI2 (ENSPSNG00000007728) #20 KTN1 (ENSPSNG00000007288) #21 TBPL2 (ENSPSNG00000007063) #22 ATG14 (ENSPSNG00000007026) #23 FBXO34 (ENSPSNG00000006956) #24 DLGAP5 (ENSPSNG00000006832) LGALS3 (ENSPSNG00000006790) #26 ENSPSNG00000006777 MAPK1IP1L (ENSPSNG00000006743) #27 SOCS4 (ENSPSNG00000006729) #28 WDHD1 (ENSPSNG00000006660) #29 GCH1 (ENSPSNG00000006579) #30 SAMD4A (ENSPSNG00000006496) #31 CGRRF1 (ENSPSNG00000006436) #32 GMFB (ENSPSNG00000006368) #33 CNIH1 (ENSPSNG00000006269) #34 CDKN3 (ENSPSNG00000006158) #35 BMP4 (ENSPSNG00000006096) #36 Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00390000017305 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Carnivora ANCESTRAL SPECIES ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Caniformia ANCESTRAL SPECIES 15 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Caniformia_b ANCESTRAL SPECIES 14 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Ursidae ANCESTRAL SPECIES 10 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912.d #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224.l #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a.q.b #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Ursus ANCESTRAL SPECIES 11 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912.d #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00950000185672 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544.m #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224.l #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a.q.b #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 ENSGT00390000013444.a.a Polar bear MODERN SPECIES 100 KIAA0586 (ENSUMAG00000016828) TIMM9 (ENSUMAG00000016801) #7 ARID4A (ENSUMAG00000016791) #8 PSMA3 (ENSUMAG00000016786) #9 ACTR10 (ENSUMAG00000016666) #10 ARMH4 (ENSUMAG00000016621) #11 SLC35F4 (ENSUMAG00000016584) #13 ENSUMAG00000016559 #14 ENSUMAG00000016554 AP5M1 (ENSUMAG00000016550) #16 EXOC5 (ENSUMAG00000016546) #17 OTX2 (ENSUMAG00000016526) #18 TMEM260 (ENSUMAG00000016516) #19 PELI2 (ENSUMAG00000016490) #20 KTN1 (ENSUMAG00000016377) #21 TBPL2 (ENSUMAG00000016364) #22 ATG14 (ENSUMAG00000016349) #23 FBXO34 (ENSUMAG00000016344) #24 DLGAP5 (ENSUMAG00000016056) LGALS3 (ENSUMAG00000015989) #26 MAPK1IP1L (ENSUMAG00000015971) #27 SOCS4 (ENSUMAG00000015967) #28 WDHD1 (ENSUMAG00000015946) #29 SAMD4A (ENSUMAG00000015883) #31 CGRRF1 (ENSUMAG00000015863) #32 GMFB (ENSUMAG00000015859) #33 CNIH1 (ENSUMAG00000015855) #34 CDKN3 (ENSUMAG00000015850) #35 BMP4 (ENSUMAG00000015839) #36 DDHD1 (ENSUMAG00000015721) ENSUMAG00000015699 American black bear MODERN SPECIES 3575 TBPL2 (ENSUAMG00000001328) #22 ATG14 (ENSUAMG00000001340) #23 FBXO34 (ENSUAMG00000001355) #24 Giant Panda MODERN SPECIES 12 ENSAMEG00000028644 #19 PELI2 (ENSAMEG00000030200) #20 KTN1 (ENSAMEG00000015706) #21 TBPL2 (ENSAMEG00000010603) #22 ATG14 (ENSAMEG00000006992) #23 ENSAMEG00000019928 #24 DLGAP5 (ENSAMEG00000007001) ENSAMEG00000028851 #26 ENSAMEG00000014782 MAPK1IP1L (ENSAMEG00000007059) #27 SOCS4 (ENSAMEG00000020091) #28 WDHD1 (ENSAMEG00000014356) #29 GCH1 (ENSAMEG00000014412) #30 SAMD4A (ENSAMEG00000015339) #31 ENSAMEG00000015332 #32 GMFB (ENSAMEG00000015331) #33 CNIH1 (ENSAMEG00000015325) #34 CDKN3 (ENSAMEG00000015323) #35 BMP4 (ENSAMEG00000015317) #36 Mustelinae ANCESTRAL SPECIES 14 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00390000003443.e ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 American mink MODERN SPECIES ARID4A (ENSNVIG00000005417) #8 PSMA3 (ENSNVIG00000005285) #9 ACTR10 (ENSNVIG00000005257) #10 ARMH4 (ENSNVIG00000005230) #11 SLC35F4 (ENSNVIG00000005200) #13 CCDC198 (ENSNVIG00000005185) #14 ENSNVIG00000005174 NAA30 (ENSNVIG00000005154) #15 AP5M1 (ENSNVIG00000005136) #16 EXOC5 (ENSNVIG00000005107) #17 OTX2 (ENSNVIG00000005090) #18 TMEM260 (ENSNVIG00000005061) #19 PELI2 (ENSNVIG00000005040) #20 ENSNVIG00000005026 KTN1 (ENSNVIG00000004281) #21 TBPL2 (ENSNVIG00000004229) #22 ATG14 (ENSNVIG00000004202) #23 FBXO34 (ENSNVIG00000004194) #24 DLGAP5 (ENSNVIG00000004141) ENSNVIG00000004043 #26 MAPK1IP1L (ENSNVIG00000004019) #27 SOCS4 (ENSNVIG00000004005) #28 WDHD1 (ENSNVIG00000003142) #29 ENSNVIG00000003065 GCH1 (ENSNVIG00000003015) #30 SAMD4A (ENSNVIG00000002939) #31 CGRRF1 (ENSNVIG00000002909) #32 GMFB (ENSNVIG00000002876) #33 CNIH1 (ENSNVIG00000002784) #34 CDKN3 (ENSNVIG00000002642) #35 BMP4 (ENSNVIG00000002596) #36 Ferret MODERN SPECIES 164 ACTR10 (ENSMPUG00000006030) #10 ARMH4 (ENSMPUG00000006024) #11 SLC35F4 (ENSMPUG00000005988) #13 ENSMPUG00000019637 CCDC198 (ENSMPUG00000005974) #14 ENSMPUG00000005967 NAA30 (ENSMPUG00000005958) #15 AP5M1 (ENSMPUG00000005943) #16 EXOC5 (ENSMPUG00000005928) #17 OTX2 (ENSMPUG00000005923) #18 TMEM260 (ENSMPUG00000005908) #19 ENSMPUG00000005902 PELI2 (ENSMPUG00000005892) #20 ENSMPUG00000005878 KTN1 (ENSMPUG00000005844) #21 TBPL2 (ENSMPUG00000005807) #22 ATG14 (ENSMPUG00000005783) #23 FBXO34 (ENSMPUG00000005779) #24 ENSMPUG00000019635 DLGAP5 (ENSMPUG00000005767) ENSMPUG00000005725 #26 MAPK1IP1L (ENSMPUG00000005722) #27 SOCS4 (ENSMPUG00000019634) #28 WDHD1 (ENSMPUG00000005542) #29 GCH1 (ENSMPUG00000005532) #30 SAMD4A (ENSMPUG00000005514) #31 CGRRF1 (ENSMPUG00000005503) #32 CNIH1 (ENSMPUG00000005483) #34 CDKN3 (ENSMPUG00000005473) #35 BMP4 (ENSMPUG00000005464) #36 ENSMPUG00000019632 Canidae ANCESTRAL SPECIES 4 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912.a #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00530000063715.a.o ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Canis_lupus ANCESTRAL SPECIES 8 ENSGT00940000156159 #8 ENSGT00550000074912.a #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00510000047486.f.a ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00530000063715.a.o ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224.e #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Dog MODERN SPECIES 36 ENSCAFG00845018183 ARMH4 (ENSCAFG00845018091) #11 ENSCAFG00845018031 SLC35F4 (ENSCAFG00845017859) #13 CCDC198 (ENSCAFG00845017758) #14 NAA30 (ENSCAFG00845017715) #15 AP5M1 (ENSCAFG00845017449) #16 EXOC5 (ENSCAFG00845017251) #17 ENSCAFG00845017176 ENSCAFG00845017134 OTX2 (ENSCAFG00845017045) #18 TMEM260 (ENSCAFG00845016875) #19 PELI2 (ENSCAFG00845016504) #20 ENSCAFG00845016467 KTN1 (ENSCAFG00845015557) #21 TBPL2 (ENSCAFG00845015295) #22 ATG14 (ENSCAFG00845015264) #23 FBXO34 (ENSCAFG00845015219) #24 DLGAP5 (ENSCAFG00845015070) LGALS3 (ENSCAFG00845015017) #26 MAPK1IP1L (ENSCAFG00845014969) #27 SOCS4 (ENSCAFG00845014951) #28 WDHD1 (ENSCAFG00845014810) #29 GCH1 (ENSCAFG00845014724) #30 SAMD4A (ENSCAFG00845004567) #31 CGRRF1 (ENSCAFG00845004543) #32 GMFB (ENSCAFG00845004525) #33 GMFB (ENSCAFG00845004489) #34 CDKN3 (ENSCAFG00845004444) #35 ENSCAFG00845004393 ENSCAFG00845004381 Dingo MODERN SPECIES 161 ENSCAFG00020008939 ENSCAFG00020008947 ENSCAFG00020008949 SLC35F4 (ENSCAFG00020008987) #13 CCDC198 (ENSCAFG00020009029) #14 NAA30 (ENSCAFG00020009034) #15 AP5M1 (ENSCAFG00020009041) #16 EXOC5 (ENSCAFG00020009052) #17 ENSCAFG00020009216 OTX2 (ENSCAFG00020009252) #18 ENSCAFG00020009268 #19 ENSCAFG00020009272 #19 PELI2 (ENSCAFG00020009324) #20 ENSCAFG00020009364 KTN1 (ENSCAFG00020009732) #21 TBPL2 (ENSCAFG00020018212) #22 ATG14 (ENSCAFG00020018215) #23 FBXO34 (ENSCAFG00020018223) #24 ENSCAFG00020018229 #25 ENSCAFG00020018232 #26 ENSCAFG00020018238 MAPK1IP1L (ENSCAFG00020018241) #27 SOCS4 (ENSCAFG00020018243) #28 ENSCAFG00020018255 #29 GCH1 (ENSCAFG00020018258) #30 SAMD4A (ENSCAFG00020018263) #31 CGRRF1 (ENSCAFG00020018279) #32 GMFB (ENSCAFG00020018285) #33 CNIH1 (ENSCAFG00020018294) #34 CDKN3 (ENSCAFG00020018297) #35 ENSCAFG00020018304 Red fox MODERN SPECIES 33 ACTR10 (ENSVVUG00000029550) #10 ARMH4 (ENSVVUG00000029553) #11 ENSVVUG00000029554 ENSVVUG00000029555 ENSVVUG00000029558 SLC35F4 (ENSVVUG00000029560) #13 CCDC198 (ENSVVUG00000029562) #14 NAA30 (ENSVVUG00000029563) #15 AP5M1 (ENSVVUG00000029565) #16 EXOC5 (ENSVVUG00000029570) #17 OTX2 (ENSVVUG00000029575) #18 TMEM260 (ENSVVUG00000029578) #19 PELI2 (ENSVVUG00000029582) #20 ENSVVUG00000029584 KTN1 (ENSVVUG00000029589) #21 TBPL2 (ENSVVUG00000029597) #22 ATG14 (ENSVVUG00000029598) #23 FBXO34 (ENSVVUG00000029599) #24 DLGAP5 (ENSVVUG00000029600) LGALS3 (ENSVVUG00000029604) #26 MAPK1IP1L (ENSVVUG00000029608) #27 SOCS4 (ENSVVUG00000029609) #28 WDHD1 (ENSVVUG00000029613) #29 GCH1 (ENSVVUG00000029657) #30 SAMD4A (ENSVVUG00000029659) #31 CGRRF1 (ENSVVUG00000029662) #32 GMFB (ENSVVUG00000029664) #33 CNIH1 (ENSVVUG00000029665) #34 CDKN3 (ENSVVUG00000029666) #35 ENSVVUG00000029670 BMP4 (ENSVVUG00000029671) #36 Felidae ANCESTRAL SPECIES 1 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665.t #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00550000074828.a.g.a.i ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Panthera ANCESTRAL SPECIES 3 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665.t #15 ENSGT00390000005665.s #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00550000074828.a.g.a.i ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Panthera_a ANCESTRAL SPECIES 7 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665.t #15 ENSGT00390000005665.s #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00550000074828.a.g.a.i ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 lion MODERN SPECIES 6 PSMA3 (ENSPLOG00000004568) #9 ACTR10 (ENSPLOG00000004544) #10 ARMH4 (ENSPLOG00000004525) #11 SLC35F4 (ENSPLOG00000004506) #13 ENSPLOG00000004497 CCDC198 (ENSPLOG00000004488) #14 NAA30 (ENSPLOG00000004476) #15 AP5M1 (ENSPLOG00000004456) #16 EXOC5 (ENSPLOG00000004425) #17 OTX2 (ENSPLOG00000004396) #18 ENSPLOG00000004390 TMEM260 (ENSPLOG00000004368) #19 ENSPLOG00000004344 PELI2 (ENSPLOG00000004331) #20 KTN1 (ENSPLOG00000004244) #21 TBPL2 (ENSPLOG00000004159) #22 ATG14 (ENSPLOG00000004138) #23 FBXO34 (ENSPLOG00000004129) #24 LGALS3 (ENSPLOG00000004111) #26 DLGAP5 (ENSPLOG00000004069) MAPK1IP1L (ENSPLOG00000004025) #27 SOCS4 (ENSPLOG00000004015) #28 WDHD1 (ENSPLOG00000003925) #29 GCH1 (ENSPLOG00000003861) #30 SAMD4A (ENSPLOG00000003784) #31 CGRRF1 (ENSPLOG00000003744) #32 ENSPLOG00000003709 #33 CNIH1 (ENSPLOG00000003662) #34 CDKN3 (ENSPLOG00000003573) #35 BMP4 (ENSPLOG00000003510) #36 DDHD1 (ENSPLOG00000003371) leopard MODERN SPECIES 21 ARID4A (ENSPPRG00000009142) #8 PSMA3 (ENSPPRG00000004064) #9 ACTR10 (ENSPPRG00000002823) #10 ARMH4 (ENSPPRG00000002270) #11 SLC35F4 (ENSPPRG00000001908) #13 CCDC198 (ENSPPRG00000001064) #14 ENSPPRG00000000305 #15 NAA30 (ENSPPRG00000000155) #15 AP5M1 (ENSPPRG00000022649) #16 EXOC5 (ENSPPRG00000023159) #17 OTX2 (ENSPPRG00000015487) #18 ENSPPRG00000018058 TMEM260 (ENSPPRG00000013149) #19 PELI2 (ENSPPRG00000011994) #20 KTN1 (ENSPPRG00000011144) #21 TBPL2 (ENSPPRG00000010245) #22 ATG14 (ENSPPRG00000009688) #23 FBXO34 (ENSPPRG00000017336) #24 ENSPPRG00000008993 DLGAP5 (ENSPPRG00000008611) LGALS3 (ENSPPRG00000008301) #26 MAPK1IP1L (ENSPPRG00000008054) #27 SOCS4 (ENSPPRG00000017291) #28 WDHD1 (ENSPPRG00000007679) #29 GCH1 (ENSPPRG00000007288) #30 SAMD4A (ENSPPRG00000005768) #31 CGRRF1 (ENSPPRG00000003328) #32 GMFB (ENSPPRG00000002548) #33 CNIH1 (ENSPPRG00000000800) #34 ENSPPRG00000023005 #35 BMP4 (ENSPPRG00000018478) #36 Tiger MODERN SPECIES 182 ENSPTIG00000001520 #19 PELI2 (ENSPTIG00000005034) #20 KTN1 (ENSPTIG00000008416) #21 TBPL2 (ENSPTIG00000020278) #22 ATG14 (ENSPTIG00000003838) #23 FBXO34 (ENSPTIG00000006158) #24 ENSPTIG00000009312 #25 LGALS3 (ENSPTIG00000010541) #26 MAPK1IP1L (ENSPTIG00000012239) #27 SOCS4 (ENSPTIG00000006233) #28 WDHD1 (ENSPTIG00000013608) #29 GCH1 (ENSPTIG00000014880) #30 SAMD4A (ENSPTIG00000018102) #31 CGRRF1 (ENSPTIG00000020312) #32 GMFB (ENSPTIG00000001394) #33 CNIH1 (ENSPTIG00000008402) #34 CDKN3 (ENSPTIG00000010145) #35 BMP4 (ENSPTIG00000017031) #36 Cat MODERN SPECIES 237 TOMM20L (ENSFCAG00000042004) ARID4A (ENSFCAG00000019223) #8 PSMA3 (ENSFCAG00000025134) #9 ACTR10 (ENSFCAG00000045749) #10 ARMH4 (ENSFCAG00000001858) #11 SLC35F4 (ENSFCAG00000001291) #13 CCDC198 (ENSFCAG00000043889) #14 NAA30 (ENSFCAG00000023358) #15 AP5M1 (ENSFCAG00000002046) #16 EXOC5 (ENSFCAG00000002045) #17 OTX2 (ENSFCAG00000024521) #18 ENSFCAG00000042008 TMEM260 (ENSFCAG00000026610) #19 PELI2 (ENSFCAG00000008685) #20 KTN1 (ENSFCAG00000007834) #21 TBPL2 (ENSFCAG00000032698) #22 ATG14 (ENSFCAG00000029645) #23 FBXO34 (ENSFCAG00000003462) #24 DLGAP5 (ENSFCAG00000018943) LGALS3 (ENSFCAG00000041666) #26 MAPK1IP1L (ENSFCAG00000040319) #27 SOCS4 (ENSFCAG00000006040) #28 WDHD1 (ENSFCAG00000023408) #29 GCH1 (ENSFCAG00000042127) #30 SAMD4A (ENSFCAG00000037990) #31 CGRRF1 (ENSFCAG00000034341) #32 GMFB (ENSFCAG00000036042) #33 CNIH1 (ENSFCAG00000031176) #34 CDKN3 (ENSFCAG00000015089) #35 BMP4 (ENSFCAG00000004772) #36 DDHD1 (ENSFCAG00000018579) Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00910000147073 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00390000017305 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Equus ANCESTRAL SPECIES 55 ENSGT00950000182755.b.a.a.a.a.a.a.a.a.a.a.a.a.a.a ENSGT00950000182755.b.a.a.a.a.a.a.a.a.b.b.a.a.a.a.a.b.b ENSGT00950000182755.b.a.a.a.a.a.a.a.a.b.b.a.a.b ENSGT00940000164846 ENSGT00950000182755.b.a.a.a.a.a.a.a.a.b.a.a.b ENSGT00940000159561 #22 ENSGT00950000182755.b.a.a.a.a.a.a.a.a.b.b.a.a.a.a.a.a.a.a ENSGT00950000182755.b.a.a.a.a.a.a.a.a.b.a.b ENSGT00950000182755.b.a.a.a.a.a.a.b.i.i.a.a ENSGT00950000182755.b.a.a.a.a.a.a.a.a.b.b.a.a.a.a.a.a.a.b ENSGT00950000182755.b.a.a.a.a.a.a.a.a.b.b.a.a.a.b.a ENSGT00950000182755.b.a.a.a.a.a.a.a.a.b.b.a.a.a.b.b ENSGT00950000182755.b.a.a.a.a.a.a.a.a.b.b.a.a.a.a.a.a.b.b ENSGT00950000182755.b.a.a.a.a.a.a.a.a.b.b.a.a.a.a.a.a.b.a ENSGT00980000198589.a.b.b.d.b ENSGT00950000182755.b.a.a.a.a.b.d ENSGT00980000198589.a.b.b.d.a ENSGT00950000182755.b.a.a.a.a.b.c ENSGT00950000182755.b.a.a.a.a.a.a.a.a.a.a.a.b.a.b.b.a.b.a ENSGT00950000182755.b.a.a.a.a.a.a.a.a.b.b.a.a.a.a.b ENSGT00950000182755.b.a.a.a.a.a.a.a.a.a.a.b.b Horse MODERN SPECIES 28 ENSECAG00000043225 ENSECAG00000052494 ENSECAG00000045797 ENSECAG00000036236 ENSECAG00000044436 ENSECAG00000059667 ENSECAG00000053702 ENSECAG00000051761 ENSECAG00000058539 ENSECAG00000009346 ENSECAG00000059615 ENSECAG00000043383 ENSECAG00000031973 ENSECAG00000041333 ENSECAG00000049808 ENSECAG00000008702 #22 ENSECAG00000018881 ENSECAG00000005497 ENSECAG00000041410 ENSECAG00000053486 ENSECAG00000043401 ENSECAG00000041561 ENSECAG00000056903 ENSECAG00000057531 ENSECAG00000024859 ENSECAG00000018175 ENSECAG00000050706 ENSECAG00000047437 ENSECAG00000054967 ENSECAG00000018857 ENSECAG00000058329 Donkey MODERN SPECIES 12 ENSEASG00005004288 ENSEASG00005028325 ENSEASG00005033975 ENSEASG00005032385 ENSEASG00005033998 ENSEASG00005032945 ENSEASG00005037427 ENSEASG00005011546 ENSEASG00005028369 ENSEASG00005030580 ENSEASG00005026098 ENSEASG00005036528 ENSEASG00005004284 ENSEASG00005004260 ENSEASG00005025862 ENSEASG00005004247 #22 ENSEASG00005032456 ENSEASG00005025916 ENSEASG00005037154 ENSEASG00005032741 ENSEASG00005026754 ENSEASG00005027780 ENSEASG00005025878 ENSEASG00005036626 ENSEASG00005034255 ENSEASG00005004233 ENSEASG00005023995 ENSEASG00005034913 ENSEASG00005027408 ENSEASG00005035626 ENSEASG00005004229 Chiroptera ANCESTRAL SPECIES 15 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00390000017305 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Microchiroptera ANCESTRAL SPECIES 19 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Greater horseshoe bat MODERN SPECIES 24 PSMA3 (ENSRFEG00010004363) #9 ENSRFEG00010004387 ACTR10 (ENSRFEG00010004399) #10 ARMH4 (ENSRFEG00010004418) #11 ENSRFEG00010004425 SLC35F4 (ENSRFEG00010004439) #13 CCDC198 (ENSRFEG00010004458) #14 NAA30 (ENSRFEG00010004478) #15 AP5M1 (ENSRFEG00010004511) #16 EXOC5 (ENSRFEG00010004550) #17 OTX2 (ENSRFEG00010000223) #18 ENSRFEG00010000266 TMEM260 (ENSRFEG00010000307) #19 PELI2 (ENSRFEG00010000362) #20 KTN1 (ENSRFEG00010000612) #21 TBPL2 (ENSRFEG00010000951) #22 ATG14 (ENSRFEG00010000977) #23 FBXO34 (ENSRFEG00010001009) #24 DLGAP5 (ENSRFEG00010001027) LGALS3 (ENSRFEG00010001061) #26 MAPK1IP1L (ENSRFEG00010001080) #27 SOCS4 (ENSRFEG00010001094) #28 WDHD1 (ENSRFEG00010001109) #29 GCH1 (ENSRFEG00010001174) #30 SAMD4A (ENSRFEG00010001221) #31 CGRRF1 (ENSRFEG00010001274) #32 GMFB (ENSRFEG00010001300) #33 CNIH1 (ENSRFEG00010001348) #34 CDKN3 (ENSRFEG00010001427) #35 BMP4 (ENSRFEG00010001465) #36 ENSRFEG00010001496 Microbat MODERN SPECIES 1221 ENSMLUG00000008124 #15 AP5M1 (ENSMLUG00000000778) #16 EXOC5 (ENSMLUG00000000761) #17 ENSMLUG00000029438 OTX2 (ENSMLUG00000022591) #18 TMEM260 (ENSMLUG00000011735) #19 PELI2 (ENSMLUG00000006603) #20 ENSMLUG00000030717 KTN1 (ENSMLUG00000006033) #21 TBPL2 (ENSMLUG00000015690) #22 ATG14 (ENSMLUG00000004893) #23 ENSMLUG00000004886 #24 Megabat MODERN SPECIES 382 KTN1 (ENSPVAG00000001283) #21 ENSPVAG00000001281 TBPL2 (ENSPVAG00000001280) #22 ATG14 (ENSPVAG00000001277) #23 Atlantogenata ANCESTRAL SPECIES 8 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Afrotheria ANCESTRAL SPECIES 6 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Afrotheria_a ANCESTRAL SPECIES 6 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Elephant MODERN SPECIES 602 TOMM20L (ENSLAFG00000008656) ARID4A (ENSLAFG00000008653) #8 PSMA3 (ENSLAFG00000008648) #9 ACTR10 (ENSLAFG00000008644) #10 ARMH4 (ENSLAFG00000011333) #11 SLC35F4 (ENSLAFG00000014182) #13 CCDC198 (ENSLAFG00000027610) #14 NAA30 (ENSLAFG00000005556) #15 AP5M1 (ENSLAFG00000012643) #16 EXOC5 (ENSLAFG00000012633) #17 ENSLAFG00000027470 OTX2 (ENSLAFG00000031459) #18 TMEM260 (ENSLAFG00000021996) #19 PELI2 (ENSLAFG00000018284) #20 KTN1 (ENSLAFG00000003459) #21 TBPL2 (ENSLAFG00000017299) #22 ATG14 (ENSLAFG00000017293) #23 FBXO34 (ENSLAFG00000015594) #24 DLGAP5 (ENSLAFG00000005169) LGALS3 (ENSLAFG00000005163) #26 MAPK1IP1L (ENSLAFG00000026164) #27 SOCS4 (ENSLAFG00000011512) #28 WDHD1 (ENSLAFG00000005385) #29 GCH1 (ENSLAFG00000002902) #30 SAMD4A (ENSLAFG00000013245) #31 CGRRF1 (ENSLAFG00000004664) #32 GMFB (ENSLAFG00000004659) #33 CNIH1 (ENSLAFG00000014841) #34 CDKN3 (ENSLAFG00000014833) #35 BMP4 (ENSLAFG00000012479) #36 DDHD1 (ENSLAFG00000014433) Hyrax MODERN SPECIES 1993 ENSPCAG00000013501 #22 ATG14 (ENSPCAG00000013371) #23 Tenrec MODERN SPECIES 7314 TBPL2 (ENSETEG00000002834) #22 Xenarthra ANCESTRAL SPECIES ENSGT00940000159561 #22 Sloth MODERN SPECIES 6580 TBPL2 (ENSCHOG00000011134) #22 Marsupialia ANCESTRAL SPECIES ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00390000012377 ENSGT00940000158586 ENSGT00940000158712 ENSGT00390000005033 ENSGT00940000154514 ENSGT00940000156480 ENSGT00830000128402 ENSGT00940000164487 ENSGT00520000055955 ENSGT00940000157547 ENSGT00390000018436.a.a ENSGT00940000161067.c ENSGT00940000161933 Marsupialia_b ANCESTRAL SPECIES ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00390000012377 ENSGT00940000158586 ENSGT00940000158712 ENSGT00390000005033 ENSGT00940000154514 ENSGT00940000156480 ENSGT00830000128402 ENSGT00940000164487 ENSGT00520000055955 ENSGT00940000157547 ENSGT00390000018436.a.a ENSGT00940000161067.c ENSGT00940000161933 Diprotodontia ANCESTRAL SPECIES ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00390000012377 ENSGT00940000158586 ENSGT00940000158712 ENSGT00390000005033 ENSGT00940000154514 ENSGT00940000156480 ENSGT00830000128402 ENSGT00940000164487 ENSGT00520000055955 ENSGT00940000157547 ENSGT00390000018436.a.a ENSGT00940000161067.c ENSGT00940000161933 Diprotodontia_a ANCESTRAL SPECIES 1 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00390000012377 ENSGT00940000158586 ENSGT00940000158712 ENSGT00390000005033 ENSGT00940000154514 ENSGT00940000156480 ENSGT00830000128402 ENSGT00940000164487 ENSGT00520000055955 ENSGT00940000157547 ENSGT00390000018436.a.a ENSGT00940000161067.c ENSGT00940000161933 koala MODERN SPECIES 24 ARID4A (ENSPCIG00000017482) #8 PSMA3 (ENSPCIG00000017491) #9 ACTR10 (ENSPCIG00000017492) #10 ARMH4 (ENSPCIG00000017493) #11 SLC35F4 (ENSPCIG00000017494) #13 CCDC198 (ENSPCIG00000017498) #14 NAA30 (ENSPCIG00000016155) #15 AP5M1 (ENSPCIG00000017500) #16 EXOC5 (ENSPCIG00000017501) #17 OTX2 (ENSPCIG00000032131) #18 TMEM260 (ENSPCIG00000017507) #19 ENSPCIG00000017509 PELI2 (ENSPCIG00000017510) #20 ENSPCIG00000025877 KTN1 (ENSPCIG00000024413) #21 TBPL2 (ENSPCIG00000036022) #22 ATG14 (ENSPCIG00000024411) #23 FBXO34 (ENSPCIG00000035794) #24 C14orf28 (ENSPCIG00000028845) KLHL28 (ENSPCIG00000028843) TOGARAM1 (ENSPCIG00000028838) PRPF39 (ENSPCIG00000028833) FKBP3 (ENSPCIG00000028832) FANCM (ENSPCIG00000005354) SYNJ2BP (ENSPCIG00000008525) ENSPCIG00000028831 COX16 (ENSPCIG00000032170) ENSPCIG00000031699 SMOC1 (ENSPCIG00000014609) ENSPCIG00000012579 ENSPCIG00000036055 Common wonbat MODERN SPECIES 1106 PSMA3 (ENSVURG00010017951) #9 ACTR10 (ENSVURG00010017945) #10 ENSVURG00010017929 #11 ENSVURG00010017925 ENSVURG00010017920 SLC35F4 (ENSVURG00010017916) #13 CCDC198 (ENSVURG00010017910) #14 NAA30 (ENSVURG00010017904) #15 AP5M1 (ENSVURG00010017891) #16 EXOC5 (ENSVURG00010017877) #17 ENSVURG00010017871 TMEM260 (ENSVURG00010017838) #19 PELI2 (ENSVURG00010017822) #20 ENSVURG00010017651 #21 ENSVURG00010017627 TBPL2 (ENSVURG00010017614) #22 ATG14 (ENSVURG00010017599) #23 Wallaby MODERN SPECIES 910 TBPL2 (ENSMEUG00000014455) #22 Tasmanian devil MODERN SPECIES 1 ARID4A (ENSSHAG00000018032) #8 PSMA3 (ENSSHAG00000017955) #9 ACTR10 (ENSSHAG00000030692) #10 ENSSHAG00000017692 #11 SLC35F4 (ENSSHAG00000017158) #13 CCDC198 (ENSSHAG00000016983) #14 NAA30 (ENSSHAG00000016832) #15 AP5M1 (ENSSHAG00000016643) #16 EXOC5 (ENSSHAG00000016552) #17 OTX2 (ENSSHAG00000015291) #18 ENSSHAG00000021938 #19 ENSSHAG00000023591 #19 PELI2 (ENSSHAG00000012697) #20 KTN1 (ENSSHAG00000009966) #21 ENSSHAG00000022944 TBPL2 (ENSSHAG00000009234) #22 ENSSHAG00000008798 #23 ENSSHAG00000022817 ENSSHAG00000008726 #24 ENSSHAG00000007511 KLHL28 (ENSSHAG00000006979) TOGARAM1 (ENSSHAG00000005559) PRPF39 (ENSSHAG00000004414) FKBP3 (ENSSHAG00000004140) ENSSHAG00000000507 ENSSHAG00000023602 ENSSHAG00000022192 COX16 (ENSSHAG00000018933) ENSSHAG00000018865 ENSSHAG00000018809 ENSSHAG00000018776 Opossum MODERN SPECIES PSMA3 (ENSMODG00000007839) #9 ACTR10 (ENSMODG00000007820) #10 ARMH4 (ENSMODG00000007807) #11 SLC35F4 (ENSMODG00000007782) #13 ENSMODG00000007762 #14 NAA30 (ENSMODG00000007755) #15 AP5M1 (ENSMODG00000007749) #16 EXOC5 (ENSMODG00000007734) #17 OTX2 (ENSMODG00000047226) #18 ENSMODG00000037723 TMEM260 (ENSMODG00000007703) #19 ENSMODG00000008179 PELI2 (ENSMODG00000007648) #20 ENSMODG00000040487 KTN1 (ENSMODG00000007623) #21 TBPL2 (ENSMODG00000007535) #22 ATG14 (ENSMODG00000007529) #23 FBXO34 (ENSMODG00000007517) #24 C14orf28 (ENSMODG00000007511) KLHL28 (ENSMODG00000007505) TOGARAM1 (ENSMODG00000007489) PRPF39 (ENSMODG00000007393) FKBP3 (ENSMODG00000007352) SYNJ2BP (ENSMODG00000046746) ENSMODG00000007310 COX16 (ENSMODG00000048581) SLC8A3 (ENSMODG00000007296) SMOC1 (ENSMODG00000007249) ENSMODG00000007233 ENSMODG00000007213 ENSMODG00000038508 Sauria ANCESTRAL SPECIES 3 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Lepidosauria ANCESTRAL SPECIES 32 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Episquamata ANCESTRAL SPECIES ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00940000158237 #21 ENSGT00950000183050.b.a #20 ENSGT00390000013544 #19 ENSGT00940000155014 #18 ENSGT00390000012837 #17 ENSGT00390000006191 #16 ENSGT00390000005665 #15 ENSGT00390000001071 #14 ENSGT00390000008727.a.b #13 ENSGT00390000012816 #11 ENSGT00910000144250 #10 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00550000075090 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Laterata ANCESTRAL SPECIES 2 ENSGT00940000165313 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00940000158237 #21 ENSGT00950000183050.b.a #20 ENSGT00390000013544 #19 ENSGT00940000155014 #18 ENSGT00390000012837 #17 ENSGT00390000006191 #16 ENSGT00390000005665 #15 ENSGT00390000001071 #14 ENSGT00390000008727.a.b #13 ENSGT00390000012816 #11 ENSGT00910000144250 #10 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00550000075090 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Common wall lizard MODERN SPECIES PSMA3 (ENSPMRG00000002821) #9 KTN1 (ENSPMRG00000002720) #21 ENSPMRG00000002669 PELI2 (ENSPMRG00000002664) #20 ENSPMRG00000002659 ENSPMRG00000002651 OTX2 (ENSPMRG00000002646) #18 TMEM260 (ENSPMRG00000002591) #19 EXOC5 (ENSPMRG00000001933) #17 AP5M1 (ENSPMRG00000001923) #16 ENSPMRG00000001917 NAA30 (ENSPMRG00000001913) #15 CCDC198 (ENSPMRG00000001903) #14 SLC35F4 (ENSPMRG00000001896) #13 ACTR10 (ENSPMRG00000001877) #10 TBPL2 (ENSPMRG00000001864) #22 ATG14 (ENSPMRG00000001859) #23 FBXO34 (ENSPMRG00000001854) #24 IMP3 (ENSPMRG00000001849) DLGAP5 (ENSPMRG00000001830) ENSPMRG00000001824 #26 MAPK1IP1L (ENSPMRG00000001811) #27 SOCS4 (ENSPMRG00000001806) #28 WDHD1 (ENSPMRG00000001761) #29 ENSPMRG00000001708 #26 GCH1 (ENSPMRG00000001685) #30 SAMD4A (ENSPMRG00000001661) #31 CGRRF1 (ENSPMRG00000001651) #32 GMFB (ENSPMRG00000001589) #33 CDKN3 (ENSPMRG00000001555) #35 BMP4 (ENSPMRG00000001548) #36 Argentine black and white tegu MODERN SPECIES 39 TOMM20L (ENSSMRG00000010186) ARID4A (ENSSMRG00000009732) #8 PSMA3 (ENSSMRG00000009719) #9 KTN1 (ENSSMRG00000009715) #21 PELI2 (ENSSMRG00000009704) #20 TMEM260 (ENSSMRG00000009692) #19 ENSSMRG00000009679 OTX2 (ENSSMRG00000009678) #18 EXOC5 (ENSSMRG00000009667) #17 AP5M1 (ENSSMRG00000009666) #16 NAA30 (ENSSMRG00000009664) #15 CCDC198 (ENSSMRG00000009663) #14 SLC35F4 (ENSSMRG00000009661) #13 ARMH4 (ENSSMRG00000009651) #11 ACTR10 (ENSSMRG00000009645) #10 TBPL2 (ENSSMRG00000009564) #22 ATG14 (ENSSMRG00000009563) #23 FBXO34 (ENSSMRG00000009562) #24 IMP3 (ENSSMRG00000009561) DLGAP5 (ENSSMRG00000009560) LGALS3 (ENSSMRG00000009558) #26 MAPK1IP1L (ENSSMRG00000009557) #27 WDHD1 (ENSSMRG00000009550) #29 GCH1 (ENSSMRG00000009549) #30 SAMD4A (ENSSMRG00000009548) #31 CGRRF1 (ENSSMRG00000009542) #32 GMFB (ENSSMRG00000009540) #33 CNIH1 (ENSSMRG00000009519) #34 BMP4 (ENSSMRG00000009515) #36 ENSSMRG00000009506 FRMD6 (ENSSMRG00000009494) Toxicofera ANCESTRAL SPECIES 5 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00940000158237 #21 ENSGT00950000183050.b.a #20 ENSGT00390000013544 #19 ENSGT00940000155014 #18 ENSGT00390000012837 #17 ENSGT00390000006191 #16 ENSGT00390000005665 #15 ENSGT00390000001071 #14 ENSGT00990000211542 ENSGT00390000008727.a.b #13 ENSGT00390000012816 #11 ENSGT00910000144250 #10 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00550000075090 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 Elapidae ANCESTRAL SPECIES 3 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00940000158237 #21 ENSGT00950000183050.b.a #20 ENSGT00390000013544 #19 ENSGT00940000155014 #18 ENSGT00390000012837 #17 ENSGT00390000006191 #16 ENSGT00390000005665 #15 ENSGT00390000001071 #14 ENSGT00990000211542 ENSGT00390000008727.a.b #13 ENSGT00910000144250 #10 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00550000075090 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Elapidae_a ANCESTRAL SPECIES 10 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00940000158237 #21 ENSGT00950000183050.b.a #20 ENSGT00390000013544 #19 ENSGT00940000155014 #18 ENSGT00390000012837 #17 ENSGT00390000006191 #16 ENSGT00390000005665 #15 ENSGT00990000211542 ENSGT00390000008727.a.b #13 ENSGT00910000144250 #10 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00550000075090 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Acanthophiinae ANCESTRAL SPECIES 13 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00940000158237 #21 ENSGT00950000183050.b.a #20 ENSGT00390000013544 #19 ENSGT00940000155014 #18 ENSGT00390000012837 #17 ENSGT00390000006191 #16 ENSGT00390000005665 #15 ENSGT00990000211542 ENSGT00390000008727.a.b #13 ENSGT00910000144250 #10 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00550000075090 ENSGT01010000222666 #25 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Eastern brown snake MODERN SPECIES 10 KIAA0586 (ENSPTXG00000001294) TIMM9 (ENSPTXG00000001298) #7 TOMM20L (ENSPTXG00000001300) ARID4A (ENSPTXG00000001303) #8 PSMA3 (ENSPTXG00000001310) #9 KTN1 (ENSPTXG00000001325) #21 PELI2 (ENSPTXG00000001377) #20 TMEM260 (ENSPTXG00000001385) #19 OTX2 (ENSPTXG00000001391) #18 EXOC5 (ENSPTXG00000001393) #17 AP5M1 (ENSPTXG00000001397) #16 NAA30 (ENSPTXG00000001399) #15 ENSPTXG00000001400 SLC35F4 (ENSPTXG00000001402) #13 ACTR10 (ENSPTXG00000001405) #10 TBPL2 (ENSPTXG00000001408) #22 ATG14 (ENSPTXG00000001412) #23 FBXO34 (ENSPTXG00000001413) #24 IMP3 (ENSPTXG00000001414) ENSPTXG00000001415 #25 LGALS3 (ENSPTXG00000001416) #26 MAPK1IP1L (ENSPTXG00000001417) #27 SOCS4 (ENSPTXG00000001419) #28 WDHD1 (ENSPTXG00000001421) #29 GCH1 (ENSPTXG00000001425) #30 SAMD4A (ENSPTXG00000001429) #31 CGRRF1 (ENSPTXG00000001432) #32 GMFB (ENSPTXG00000001434) #33 CNIH1 (ENSPTXG00000001436) #34 CDKN3 (ENSPTXG00000001440) #35 BMP4 (ENSPTXG00000001504) #36 Mainland tiger snake MODERN SPECIES 31 KIAA0586 (ENSNSUG00000019272) TIMM9 (ENSNSUG00000019273) #7 TOMM20L (ENSNSUG00000019274) ARID4A (ENSNSUG00000019275) #8 PSMA3 (ENSNSUG00000019276) #9 KTN1 (ENSNSUG00000019277) #21 PELI2 (ENSNSUG00000019278) #20 ENSNSUG00000019279 #19 OTX2 (ENSNSUG00000019281) #18 EXOC5 (ENSNSUG00000019283) #17 AP5M1 (ENSNSUG00000019284) #16 NAA30 (ENSNSUG00000019285) #15 ENSNSUG00000019286 SLC35F4 (ENSNSUG00000019287) #13 ACTR10 (ENSNSUG00000019288) #10 TBPL2 (ENSNSUG00000019289) #22 ATG14 (ENSNSUG00000019290) #23 FBXO34 (ENSNSUG00000019291) #24 IMP3 (ENSNSUG00000019292) ENSNSUG00000019293 #25 LGALS3 (ENSNSUG00000019295) #26 MAPK1IP1L (ENSNSUG00000019296) #27 SOCS4 (ENSNSUG00000019297) #28 WDHD1 (ENSNSUG00000019298) #29 GCH1 (ENSNSUG00000019299) #30 SAMD4A (ENSNSUG00000019301) #31 ENSNSUG00000019307 #32 ENSNSUG00000019308 #32 GMFB (ENSNSUG00000019309) #33 CNIH1 (ENSNSUG00000019310) #34 CDKN3 (ENSNSUG00000019312) #35 Blue-lipped sea krait MODERN SPECIES 4855 ACTR10 (ENSLLTG00000013206) #10 TBPL2 (ENSLLTG00000012884) #22 Indian cobra MODERN SPECIES ENSNNAG00000004050 TOMM20L (ENSNNAG00000004072) PSMA3 (ENSNNAG00000004406) #9 KTN1 (ENSNNAG00000004514) #21 PELI2 (ENSNNAG00000004953) #20 ENSNNAG00000004973 #19 ENSNNAG00000005014 #19 OTX2 (ENSNNAG00000005044) #18 EXOC5 (ENSNNAG00000005063) #17 AP5M1 (ENSNNAG00000005163) #16 NAA30 (ENSNNAG00000005185) #15 CCDC198 (ENSNNAG00000005201) #14 ENSNNAG00000005220 SLC35F4 (ENSNNAG00000005228) #13 ACTR10 (ENSNNAG00000005270) #10 TBPL2 (ENSNNAG00000005302) #22 ATG14 (ENSNNAG00000005346) #23 FBXO34 (ENSNNAG00000005364) #24 IMP3 (ENSNNAG00000005373) DLGAP5 (ENSNNAG00000005381) LGALS3 (ENSNNAG00000005456) #26 MAPK1IP1L (ENSNNAG00000005480) #27 SOCS4 (ENSNNAG00000005497) #28 ENSNNAG00000005499 #29 GCH1 (ENSNNAG00000005510) #30 SAMD4A (ENSNNAG00000005541) #31 CGRRF1 (ENSNNAG00000005631) #32 GMFB (ENSNNAG00000005652) #33 CNIH1 (ENSNNAG00000005663) #34 CDKN3 (ENSNNAG00000005708) #35 BMP4 (ENSNNAG00000006026) #36 tuatara MODERN SPECIES 1457 AP5M1 (ENSSPUG00000002921) #16 EXOC5 (ENSSPUG00000002936) #17 OTX2 (ENSSPUG00000002953) #18 TMEM260 (ENSSPUG00000002974) #19 PELI2 (ENSSPUG00000003044) #20 KTN1 (ENSSPUG00000003061) #21 TBPL2 (ENSSPUG00000003135) #22 ATG14 (ENSSPUG00000003167) #23 FBXO34 (ENSSPUG00000003244) #24 Archelosauria ANCESTRAL SPECIES 2 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Archosauria ANCESTRAL SPECIES 5 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Aves ANCESTRAL SPECIES 2 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Neognathae ANCESTRAL SPECIES 4 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Neognathae_b ANCESTRAL SPECIES 6 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Passeriformes ANCESTRAL SPECIES 5 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Great tit MODERN SPECIES 25 TIMM9 (ENSPMJG00000002691) #7 ARID4A (ENSPMJG00000002697) #8 PSMA3 (ENSPMJG00000003153) #9 ACTR10 (ENSPMJG00000003159) #10 ARMH4 (ENSPMJG00000003213) #11 SLC35F4 (ENSPMJG00000003288) #13 CCDC198 (ENSPMJG00000003319) #14 NAA30 (ENSPMJG00000003327) #15 AP5M1 (ENSPMJG00000003336) #16 EXOC5 (ENSPMJG00000003341) #17 OTX2 (ENSPMJG00000003401) #18 TMEM260 (ENSPMJG00000003404) #19 PELI2 (ENSPMJG00000003476) #20 ENSPMJG00000003486 KTN1 (ENSPMJG00000003514) #21 TBPL2 (ENSPMJG00000011807) #22 ATG14 (ENSPMJG00000011808) #23 FBXO34 (ENSPMJG00000011809) #24 DLGAP5 (ENSPMJG00000011810) LGALS3 (ENSPMJG00000011811) #26 MAPK1IP1L (ENSPMJG00000011812) #27 SOCS4 (ENSPMJG00000011813) #28 WDHD1 (ENSPMJG00000011814) #29 GCH1 (ENSPMJG00000011815) #30 SAMD4A (ENSPMJG00000011816) #31 CGRRF1 (ENSPMJG00000011817) #32 GMFB (ENSPMJG00000011818) #33 CNIH1 (ENSPMJG00000011819) #34 CDKN3 (ENSPMJG00000011820) #35 BMP4 (ENSPMJG00000011823) #36 DDHD1 (ENSPMJG00000011826) Passeriformes_d ANCESTRAL SPECIES 5 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Passeriformes_g ANCESTRAL SPECIES ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030.c #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00940000175234 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Passeroidea ANCESTRAL SPECIES 1 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030.c #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Common canary MODERN SPECIES 3 PSMA3 (ENSSCAG00000005340) #9 ACTR10 (ENSSCAG00000005334) #10 ARMH4 (ENSSCAG00000005328) #11 SLC35F4 (ENSSCAG00000005323) #13 CCDC198 (ENSSCAG00000005317) #14 NAA30 (ENSSCAG00000005313) #15 AP5M1 (ENSSCAG00000005309) #16 EXOC5 (ENSSCAG00000005307) #17 OTX2 (ENSSCAG00000005303) #18 TMEM260 (ENSSCAG00000005274) #19 PELI2 (ENSSCAG00000005266) #20 PPM1A (ENSSCAG00000005263) DHRS7 (ENSSCAG00000005253) PCNX4 (ENSSCAG00000005247) KTN1 (ENSSCAG00000002797) #21 TBPL2 (ENSSCAG00000002474) #22 ATG14 (ENSSCAG00000002454) #23 FBXO34 (ENSSCAG00000002446) #24 DLGAP5 (ENSSCAG00000002436) LGALS3 (ENSSCAG00000002431) #26 MAPK1IP1L (ENSSCAG00000002421) #27 SOCS4 (ENSSCAG00000002417) #28 WDHD1 (ENSSCAG00000002410) #29 GCH1 (ENSSCAG00000002400) #30 SAMD4A (ENSSCAG00000002382) #31 CGRRF1 (ENSSCAG00000002374) #32 ENSSCAG00000002356 BMP4 (ENSSCAG00000002351) #36 CDKN3 (ENSSCAG00000002328) #35 CNIH1 (ENSSCAG00000002324) #34 GMFB (ENSSCAG00000002320) #33 Zebra finch MODERN SPECIES 27 DACT1 (ENSTGUG00000013023) TIMM9 (ENSTGUG00000013029) #7 ARID4A (ENSTGUG00000013032) #8 PSMA3 (ENSTGUG00000013036) #9 ACTR10 (ENSTGUG00000013040) #10 ARMH4 (ENSTGUG00000021718) #11 SLC35F4 (ENSTGUG00000013048) #13 CCDC198 (ENSTGUG00000020389) #14 NAA30 (ENSTGUG00000026471) #15 AP5M1 (ENSTGUG00000013050) #16 EXOC5 (ENSTGUG00000013051) #17 OTX2 (ENSTGUG00000013055) #18 TMEM260 (ENSTGUG00000013057) #19 PELI2 (ENSTGUG00000026455) #20 KTN1 (ENSTGUG00000013063) #21 TBPL2 (ENSTGUG00000013070) #22 ATG14 (ENSTGUG00000013072) #23 FBXO34 (ENSTGUG00000013074) #24 DLGAP5 (ENSTGUG00000013075) LGALS3 (ENSTGUG00000013077) #26 MAPK1IP1L (ENSTGUG00000013078) #27 SOCS4 (ENSTGUG00000013079) #28 WDHD1 (ENSTGUG00000013080) #29 GCH1 (ENSTGUG00000013083) #30 SAMD4A (ENSTGUG00000013086) #31 CGRRF1 (ENSTGUG00000013088) #32 CNIH1 (ENSTGUG00000013093) #34 CDKN3 (ENSTGUG00000029019) #35 BMP4 (ENSTGUG00000013095) #36 ENSTGUG00000013097 ENSTGUG00000023770 Medium ground finch MODERN SPECIES 6 DACT1 (ENSGFOG00000000977) KIAA0586 (ENSGFOG00000000988) TIMM9 (ENSGFOG00000001009) #7 ARID4A (ENSGFOG00000001108) #8 PSMA3 (ENSGFOG00000001621) #9 ACTR10 (ENSGFOG00000001693) #10 ARMH4 (ENSGFOG00000001734) #11 SLC35F4 (ENSGFOG00000001755) #13 NAA30 (ENSGFOG00000001774) #15 AP5M1 (ENSGFOG00000001815) #16 EXOC5 (ENSGFOG00000001880) #17 OTX2 (ENSGFOG00000001897) #18 TMEM260 (ENSGFOG00000001917) #19 PELI2 (ENSGFOG00000001948) #20 KTN1 (ENSGFOG00000001982) #21 TBPL2 (ENSGFOG00000002196) #22 ATG14 (ENSGFOG00000002212) #23 FBXO34 (ENSGFOG00000002238) #24 DLGAP5 (ENSGFOG00000002309) LGALS3 (ENSGFOG00000002340) #26 MAPK1IP1L (ENSGFOG00000002361) #27 SOCS4 (ENSGFOG00000002369) #28 ENSGFOG00000002385 #29 ENSGFOG00000002456 #29 GCH1 (ENSGFOG00000002469) #30 SAMD4A (ENSGFOG00000002497) #31 CGRRF1 (ENSGFOG00000002523) #32 ENSGFOG00000002539 CNIH1 (ENSGFOG00000002556) #34 CDKN3 (ENSGFOG00000002572) #35 BMP4 (ENSGFOG00000002591) #36 Flycatcher MODERN SPECIES 24 KIAA0586 (ENSFALG00000003543) TIMM9 (ENSFALG00000025871) #7 ARID4A (ENSFALG00000003561) #8 PSMA3 (ENSFALG00000003573) #9 ACTR10 (ENSFALG00000003589) #10 ARMH4 (ENSFALG00000003608) #11 SLC35F4 (ENSFALG00000003614) #13 CCDC198 (ENSFALG00000003624) #14 NAA30 (ENSFALG00000003631) #15 AP5M1 (ENSFALG00000003651) #16 EXOC5 (ENSFALG00000003680) #17 OTX2 (ENSFALG00000003708) #18 TMEM260 (ENSFALG00000003715) #19 PELI2 (ENSFALG00000003719) #20 KTN1 (ENSFALG00000003725) #21 TBPL2 (ENSFALG00000003735) #22 ATG14 (ENSFALG00000025780) #23 ENSFALG00000003742 #24 ENSFALG00000027075 #24 DLGAP5 (ENSFALG00000003754) LGALS3 (ENSFALG00000025755) #26 MAPK1IP1L (ENSFALG00000024636) #27 ENSFALG00000015043 #28 WDHD1 (ENSFALG00000003776) #29 GCH1 (ENSFALG00000003779) #30 SAMD4A (ENSFALG00000003787) #31 CGRRF1 (ENSFALG00000028815) #32 GMFB (ENSFALG00000024046) #33 CDKN3 (ENSFALG00000003820) #35 BMP4 (ENSFALG00000027239) #36 ENSFALG00000024086 Neognathae_c ANCESTRAL SPECIES 6 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00960000189593 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Kakapo MODERN SPECIES 21 ENSSHBG00005004978 ARMH4 (ENSSHBG00005004984) #11 SLC35F4 (ENSSHBG00005004992) #13 ENSSHBG00005004997 NAA30 (ENSSHBG00005005000) #15 ENSSHBG00005005003 AP5M1 (ENSSHBG00005005006) #16 EXOC5 (ENSSHBG00005005021) #17 ENSSHBG00005005027 ENSSHBG00005005030 OTX2 (ENSSHBG00005005035) #18 ENSSHBG00005005038 #19 ENSSHBG00005005043 #19 PELI2 (ENSSHBG00005005055) #20 KTN1 (ENSSHBG00005005067) #21 TBPL2 (ENSSHBG00005005074) #22 ATG14 (ENSSHBG00005005079) #23 FBXO34 (ENSSHBG00005005084) #24 ENSSHBG00005005086 #25 DLGAP5 (ENSSHBG00005005090) LGALS3 (ENSSHBG00005000918) #26 MAPK1IP1L (ENSSHBG00005004570) #27 SOCS4 (ENSSHBG00005004577) #28 WDHD1 (ENSSHBG00005004583) #29 GCH1 (ENSSHBG00005004591) #30 SAMD4A (ENSSHBG00005004599) #31 CGRRF1 (ENSSHBG00005004610) #32 GMFB (ENSSHBG00005004616) #33 CNIH1 (ENSSHBG00005004622) #34 CDKN3 (ENSSHBG00005004627) #35 BMP4 (ENSSHBG00005004632) #36 Golden eagle MODERN SPECIES 11 KIAA0586 (ENSACCG00020009889) TIMM9 (ENSACCG00020009851) #7 ARID4A (ENSACCG00020009778) #8 PSMA3 (ENSACCG00020009648) #9 ACTR10 (ENSACCG00020009631) #10 ARMH4 (ENSACCG00020009606) #11 SLC35F4 (ENSACCG00020009568) #13 CCDC198 (ENSACCG00020009554) #14 NAA30 (ENSACCG00020009541) #15 AP5M1 (ENSACCG00020009528) #16 EXOC5 (ENSACCG00020009509) #17 ENSACCG00020009484 ENSACCG00020009462 PELI2 (ENSACCG00020004512) #20 KTN1 (ENSACCG00020004438) #21 TBPL2 (ENSACCG00020004388) #22 ATG14 (ENSACCG00020004376) #23 FBXO34 (ENSACCG00020004372) #24 ENSACCG00020004364 #25 LGALS3 (ENSACCG00020004357) #26 MAPK1IP1L (ENSACCG00020004343) #27 SOCS4 (ENSACCG00020004339) #28 WDHD1 (ENSACCG00020004320) #29 GCH1 (ENSACCG00020004311) #30 SAMD4A (ENSACCG00020004297) #31 CGRRF1 (ENSACCG00020004286) #32 GMFB (ENSACCG00020004269) #33 CNIH1 (ENSACCG00020004260) #34 CDKN3 (ENSACCG00020004249) #35 ENSACCG00020004241 BMP4 (ENSACCG00020004232) #36 Galloanserae ANCESTRAL SPECIES 4 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Anatidae ANCESTRAL SPECIES 9 ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 ENSGT00940000156065 Duck MODERN SPECIES 23 DACT1 (ENSAPLG00000017056) KIAA0586 (ENSAPLG00000007055) ENSAPLG00000025019 ARID4A (ENSAPLG00000006185) #8 PSMA3 (ENSAPLG00000015841) #9 ACTR10 (ENSAPLG00000016109) #10 ARMH4 (ENSAPLG00000000800) #11 SLC35F4 (ENSAPLG00000001042) #13 NAA30 (ENSAPLG00000001619) #15 AP5M1 (ENSAPLG00000001799) #16 EXOC5 (ENSAPLG00000002629) #17 OTX2 (ENSAPLG00000030438) #18 TMEM260 (ENSAPLG00000008287) #19 PELI2 (ENSAPLG00000008440) #20 KTN1 (ENSAPLG00000012978) #21 TBPL2 (ENSAPLG00000006951) #22 ATG14 (ENSAPLG00000006865) #23 FBXO34 (ENSAPLG00000026413) #24 DLGAP5 (ENSAPLG00000006300) LGALS3 (ENSAPLG00000006188) #26 MAPK1IP1L (ENSAPLG00000006181) #27 SOCS4 (ENSAPLG00000011447) #28 ENSAPLG00000022237 #29 GCH1 (ENSAPLG00000005356) #30 SAMD4A (ENSAPLG00000005142) #31 CGRRF1 (ENSAPLG00000005044) #32 GMFB (ENSAPLG00000023672) #33 CNIH1 (ENSAPLG00000004994) #34 CDKN3 (ENSAPLG00000004902) #35 BMP4 (ENSAPLG00000028313) #36 ENSAPLG00000003177 Pink-footed goose MODERN SPECIES 56 DACT1 (ENSABRG00000013488) KIAA0586 (ENSABRG00000013478) TIMM9 (ENSABRG00000013463) #7 ARID4A (ENSABRG00000013291) #8 PSMA3 (ENSABRG00000013193) #9 ACTR10 (ENSABRG00000013140) #10 ARMH4 (ENSABRG00000013125) #11 SLC35F4 (ENSABRG00000013099) #13 NAA30 (ENSABRG00000013081) #15 AP5M1 (ENSABRG00000013069) #16 EXOC5 (ENSABRG00000013062) #17 OTX2 (ENSABRG00000013040) #18 TMEM260 (ENSABRG00000013023) #19 PELI2 (ENSABRG00000013012) #20 KTN1 (ENSABRG00000012924) #21 TBPL2 (ENSABRG00000012912) #22 ATG14 (ENSABRG00000012904) #23 FBXO34 (ENSABRG00000012903) #24 DLGAP5 (ENSABRG00000012898) LGALS3 (ENSABRG00000012894) #26 MAPK1IP1L (ENSABRG00000012888) #27 SOCS4 (ENSABRG00000012883) #28 WDHD1 (ENSABRG00000012864) #29 GCH1 (ENSABRG00000012851) #30 SAMD4A (ENSABRG00000012842) #31 CGRRF1 (ENSABRG00000012818) #32 CNIH1 (ENSABRG00000012802) #34 CDKN3 (ENSABRG00000012797) #35 BMP4 (ENSABRG00000012787) #36 DDHD1 (ENSABRG00000012748) FERMT2 (ENSABRG00000010735) Phasianidae ANCESTRAL SPECIES 4 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000155369.A ENSGT00940000154720 Phasianidae_b ANCESTRAL SPECIES 3 ENSGT00390000012397 ENSGT00940000165313 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000154720 ENSGT00940000158830 Chicken MODERN SPECIES 34 TIMM9 (ENSGALG00010017363) ARID4A (ENSGALG00010017384) #8 PSMA3 (ENSGALG00010017428) #9 ACTR10 (ENSGALG00010017435) #10 ENSGALG00010020524 #10 ARMH4 (ENSGALG00010017452) #11 SLC35F4 (ENSGALG00010017153) #13 CCDC198 (ENSGALG00010017169) #14 NAA30 (ENSGALG00010017185) #15 AP5M1 (ENSGALG00010017201) #16 EXOC5 (ENSGALG00010017252) #17 OTX2 (ENSGALG00010019688) #18 TMEM260 (ENSGALG00010018406) #19 PELI2 (ENSGALG00010018415) #20 KTN1 (ENSGALG00010018462) #21 TBPL2 (ENSGALG00010018499) #22 ATG14 (ENSGALG00010018501) #23 FBXO34 (ENSGALG00010018551) #24 DLGAP5 (ENSGALG00010018564) LGALS3 (ENSGALG00010018593) #26 MAPK1IP1L (ENSGALG00010018619) #27 SOCS4 (ENSGALG00010018750) #28 WDHD1 (ENSGALG00010018780) #29 GCH1 (ENSGALG00010018806) #30 SAMD4A (ENSGALG00010018834) #31 CGRRF1 (ENSGALG00010018847) #32 GMFB (ENSGALG00010018876) #33 CNIH1 (ENSGALG00010018911) #34 CDKN3 (ENSGALG00010018932) #35 ENSGALG00010020024 ENSGALG00010018938 Turkey MODERN SPECIES 25 ENSMGAG00000013614 ARID4A (ENSMGAG00000013615) #8 PSMA3 (ENSMGAG00000013617) #9 ENSMGAG00000021224 #10 ENSMGAG00000013619 #10 ARMH4 (ENSMGAG00000013621) #11 SLC35F4 (ENSMGAG00000013622) #13 CCDC198 (ENSMGAG00000013624) #14 NAA30 (ENSMGAG00000013627) #15 AP5M1 (ENSMGAG00000013628) #16 EXOC5 (ENSMGAG00000013632) #17 OTX2 (ENSMGAG00000022347) #18 TMEM260 (ENSMGAG00000013639) #19 PELI2 (ENSMGAG00000013672) #20 KTN1 (ENSMGAG00000013659) #21 TBPL2 (ENSMGAG00000013657) #22 ATG14 (ENSMGAG00000013653) #23 FBXO34 (ENSMGAG00000013652) #24 DLGAP5 (ENSMGAG00000013648) LGALS3 (ENSMGAG00000013646) #26 MAPK1IP1L (ENSMGAG00000013675) #27 SOCS4 (ENSMGAG00000015396) #28 WDHD1 (ENSMGAG00000013676) #29 GCH1 (ENSMGAG00000013681) #30 SAMD4A (ENSMGAG00000013686) #31 CGRRF1 (ENSMGAG00000013691) #32 GMFB (ENSMGAG00000022057) #33 CNIH1 (ENSMGAG00000013694) #34 CDKN3 (ENSMGAG00000013696) #35 ENSMGAG00000019820 ENSMGAG00000013703 Japanese quail MODERN SPECIES 23 KIAA0586 (ENSCJPG00005005686) TIMM9 (ENSCJPG00005005692) #7 ARID4A (ENSCJPG00005005700) #8 PSMA3 (ENSCJPG00005006015) #9 ACTR10 (ENSCJPG00005006073) #10 ARMH4 (ENSCJPG00005006085) #11 SLC35F4 (ENSCJPG00005006099) #13 ENSCJPG00005006115 NAA30 (ENSCJPG00005006116) #15 AP5M1 (ENSCJPG00005006162) #16 EXOC5 (ENSCJPG00005006164) #17 OTX2 (ENSCJPG00005006178) #18 TMEM260 (ENSCJPG00005006182) #19 PELI2 (ENSCJPG00005006186) #20 KTN1 (ENSCJPG00005006192) #21 TBPL2 (ENSCJPG00005006225) #22 ATG14 (ENSCJPG00005006230) #23 FBXO34 (ENSCJPG00005006231) #24 DLGAP5 (ENSCJPG00005006235) LGALS3 (ENSCJPG00005006236) #26 MAPK1IP1L (ENSCJPG00005006239) #27 SOCS4 (ENSCJPG00005006240) #28 WDHD1 (ENSCJPG00005006242) #29 GCH1 (ENSCJPG00005006250) #30 SAMD4A (ENSCJPG00005006252) #31 CGRRF1 (ENSCJPG00005006258) #32 GMFB (ENSCJPG00005006265) #33 CNIH1 (ENSCJPG00005006270) #34 CDKN3 (ENSCJPG00005006275) #35 MDGA2 (ENSCJPG00005006314) ENSCJPG00005006335 African ostrich MODERN SPECIES 471 TIMM9 (ENSSCUG00000008143) #7 ARID4A (ENSSCUG00000008134) #8 PSMA3 (ENSSCUG00000008092) #9 ACTR10 (ENSSCUG00000008086) #10 ARMH4 (ENSSCUG00000008085) #11 SLC35F4 (ENSSCUG00000008084) #13 ENSSCUG00000008083 #14 NAA30 (ENSSCUG00000008082) #15 AP5M1 (ENSSCUG00000008079) #16 EXOC5 (ENSSCUG00000008066) #17 OTX2 (ENSSCUG00000008062) #18 ENSSCUG00000008061 TMEM260 (ENSSCUG00000008059) #19 PELI2 (ENSSCUG00000008055) #20 KTN1 (ENSSCUG00000008043) #21 TBPL2 (ENSSCUG00000008037) #22 ATG14 (ENSSCUG00000008034) #23 FBXO34 (ENSSCUG00000008033) #24 DLGAP5 (ENSSCUG00000008031) LGALS3 (ENSSCUG00000008030) #26 MAPK1IP1L (ENSSCUG00000008029) #27 SOCS4 (ENSSCUG00000008027) #28 WDHD1 (ENSSCUG00000008025) #29 GCH1 (ENSSCUG00000008024) #30 SAMD4A (ENSSCUG00000008023) #31 CGRRF1 (ENSSCUG00000008022) #32 GMFB (ENSSCUG00000008021) #33 ENSSCUG00000008020 BMP4 (ENSSCUG00000008018) #36 DDHD1 (ENSSCUG00000008002) Australian saltwater crocodile MODERN SPECIES 64 KIAA0586 (ENSCPRG00005017940) TIMM9 (ENSCPRG00005017936) #7 ARID4A (ENSCPRG00005017932) #8 PSMA3 (ENSCPRG00005017923) #9 ACTR10 (ENSCPRG00005017915) #10 ARMH4 (ENSCPRG00005017913) #11 SLC35F4 (ENSCPRG00005017910) #13 ENSCPRG00005017907 NAA30 (ENSCPRG00005017906) #15 AP5M1 (ENSCPRG00005017901) #16 EXOC5 (ENSCPRG00005017897) #17 OTX2 (ENSCPRG00005017888) #18 TMEM260 (ENSCPRG00005017876) #19 PELI2 (ENSCPRG00005017870) #20 KTN1 (ENSCPRG00005017124) #21 TBPL2 (ENSCPRG00005016953) #22 ATG14 (ENSCPRG00005016948) #23 FBXO34 (ENSCPRG00005016944) #24 DLGAP5 (ENSCPRG00005016917) LGALS3 (ENSCPRG00005016912) #26 KCNH5 (ENSCPRG00005016893) RHOJ (ENSCPRG00005016885) GPHB5 (ENSCPRG00005016882) PPP2R5E (ENSCPRG00005016878) WDR89 (ENSCPRG00005016871) ENSCPRG00005016869 SGPP1 (ENSCPRG00005016866) SYNE2 (ENSCPRG00005016617) ESR2 (ENSCPRG00005016580) MTHFD1 (ENSCPRG00005016135) AKAP5 (ENSCPRG00005016108) Cryptodira ANCESTRAL SPECIES 38 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000159502 #36 Chinese turtle MODERN SPECIES 849 OTX2 (ENSPSIG00000005699) #18 TMEM260 (ENSPSIG00000007098) #19 PELI2 (ENSPSIG00000009391) #20 KTN1 (ENSPSIG00000010234) #21 TBPL2 (ENSPSIG00000010865) #22 ATG14 (ENSPSIG00000010882) #23 FBXO34 (ENSPSIG00000010904) #24 DLGAP5 (ENSPSIG00000011041) LGALS3 (ENSPSIG00000011319) #26 MAPK1IP1L (ENSPSIG00000011538) #27 SOCS4 (ENSPSIG00000002029) #28 WDHD1 (ENSPSIG00000011635) #29 GCH1 (ENSPSIG00000012776) #30 Testudinoidea ANCESTRAL SPECIES 3 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717.s #35 ENSGT00940000159502 #36 Emydidae ANCESTRAL SPECIES 43 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT01010000222666 #25 ENSGT00940000157224.s.b #26 ENSGT00940000158652 ENSGT00940000157224.t #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717.s #35 Three-toed box turtle MODERN SPECIES 87 ENSTMTG00000019985 ARID4A (ENSTMTG00000019991) #8 PSMA3 (ENSTMTG00000020053) #9 ACTR10 (ENSTMTG00000020080) #10 ARMH4 (ENSTMTG00000020106) #11 SLC35F4 (ENSTMTG00000020114) #13 CCDC198 (ENSTMTG00000020126) #14 NAA30 (ENSTMTG00000020135) #15 AP5M1 (ENSTMTG00000020142) #16 EXOC5 (ENSTMTG00000020151) #17 OTX2 (ENSTMTG00000020173) #18 TMEM260 (ENSTMTG00000020185) #19 ENSTMTG00000020215 PELI2 (ENSTMTG00000020222) #20 KTN1 (ENSTMTG00000020234) #21 TBPL2 (ENSTMTG00000020329) #22 ATG14 (ENSTMTG00000020342) #23 FBXO34 (ENSTMTG00000020353) #24 ENSTMTG00000020361 #25 ENSTMTG00000020371 #26 MAPK1IP1L (ENSTMTG00000020377) #27 SOCS4 (ENSTMTG00000020382) #28 WDHD1 (ENSTMTG00000020389) #29 GCH1 (ENSTMTG00000020438) #30 SAMD4A (ENSTMTG00000020451) #31 GMFB (ENSTMTG00000020474) #33 CNIH1 (ENSTMTG00000020481) #34 CDKN3 (ENSTMTG00000020488) #35 BMP4 (ENSTMTG00000020514) #36 DDHD1 (ENSTMTG00000020517) FERMT2 (ENSTMTG00000020545) painted turtle MODERN SPECIES 756 KIAA0586 (ENSCPBG00000024832) TOMM20L (ENSCPBG00000024845) ARID4A (ENSCPBG00000024815) #8 PSMA3 (ENSCPBG00000024808) #9 ACTR10 (ENSCPBG00000024806) #10 ARMH4 (ENSCPBG00000024805) #11 SLC35F4 (ENSCPBG00000024804) #13 CCDC198 (ENSCPBG00000024802) #14 NAA30 (ENSCPBG00000024800) #15 AP5M1 (ENSCPBG00000024799) #16 EXOC5 (ENSCPBG00000024798) #17 OTX2 (ENSCPBG00000024794) #18 TMEM260 (ENSCPBG00000024790) #19 PELI2 (ENSCPBG00000024788) #20 KTN1 (ENSCPBG00000020358) #21 TBPL2 (ENSCPBG00000020136) #22 ATG14 (ENSCPBG00000020090) #23 FBXO34 (ENSCPBG00000020084) #24 ENSCPBG00000020083 #25 DLGAP5 (ENSCPBG00000020080) ENSCPBG00000020077 #26 MAPK1IP1L (ENSCPBG00000020075) #27 SOCS4 (ENSCPBG00000020073) #28 WDHD1 (ENSCPBG00000020071) #29 GCH1 (ENSCPBG00000020069) #30 SAMD4A (ENSCPBG00000020066) #31 CGRRF1 (ENSCPBG00000020065) #32 GMFB (ENSCPBG00000020064) #33 CNIH1 (ENSCPBG00000020063) #34 ENSCPBG00000020062 #35 ENSCPBG00000020061 #35 Testudinidae ANCESTRAL SPECIES 43 ENSGT00940000160102 #7 ENSGT00390000011698.c.b ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111340 #27 ENSGT00940000161456 #28 ENSGT00390000002030 #29 ENSGT00390000013481.c.a #30 ENSGT00940000157933 #31 ENSGT00390000004542 #32 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717.s #35 ENSGT00940000159502 #36 ENSGT00940000156065 Goode s thornscrub tortoise MODERN SPECIES 18 TOMM20L (ENSGEVG00005002765) ARID4A (ENSGEVG00005002716) #8 PSMA3 (ENSGEVG00005002683) #9 ACTR10 (ENSGEVG00005002670) #10 ARMH4 (ENSGEVG00005002659) #11 SLC35F4 (ENSGEVG00005002650) #13 CCDC198 (ENSGEVG00005002639) #14 NAA30 (ENSGEVG00005002629) #15 AP5M1 (ENSGEVG00005002607) #16 EXOC5 (ENSGEVG00005002581) #17 OTX2 (ENSGEVG00005002569) #18 TMEM260 (ENSGEVG00005002559) #19 ENSGEVG00005002547 PELI2 (ENSGEVG00005002542) #20 KTN1 (ENSGEVG00005002428) #21 TBPL2 (ENSGEVG00005002353) #22 ATG14 (ENSGEVG00005002336) #23 FBXO34 (ENSGEVG00005002316) #24 ENSGEVG00005002302 #25 LGALS3 (ENSGEVG00005002286) #26 MAPK1IP1L (ENSGEVG00005002278) #27 SOCS4 (ENSGEVG00005002275) #28 WDHD1 (ENSGEVG00005002254) #29 GCH1 (ENSGEVG00005002236) #30 SAMD4A (ENSGEVG00005002159) #31 CGRRF1 (ENSGEVG00005002112) #32 GMFB (ENSGEVG00005002089) #33 CNIH1 (ENSGEVG00005002078) #34 ENSGEVG00005002069 #35 ENSGEVG00005002054 #35 BMP4 (ENSGEVG00005002047) #36 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 2358 ENSCABG00000020459 #22 PDCD2 (ENSCABG00000020457) GNPAT (ENSCABG00000020437) C1orf131 (ENSCABG00000020434) TRIM67 (ENSCABG00000020433) FAM89A (ENSCABG00000020432) ARV1 (ENSCABG00000020431) TTC13 (ENSCABG00000020327) ENSCABG00000020315 CAPN9 (ENSCABG00000020311) AGT (ENSCABG00000020310) COG2 (ENSCABG00000020309) PGBD5 (ENSCABG00000020307) GALNT2 (ENSCABG00000020292) Abingdon island giant tortoise MODERN SPECIES 2761 ENSCABG00000019572 #20 KTN1 (ENSCABG00000018516) #21 TBPL2 (ENSCABG00000018464) #22 ATG14 (ENSCABG00000018463) #23 FBXO34 (ENSCABG00000018462) #24 DLGAP5 (ENSCABG00000018461) LGALS3 (ENSCABG00000018457) #26 MAPK1IP1L (ENSCABG00000018456) #27 SOCS4 (ENSCABG00000018454) #28 WDHD1 (ENSCABG00000018449) #29 GCH1 (ENSCABG00000018440) #30 SAMD4A (ENSCABG00000018382) #31 Anura ANCESTRAL SPECIES 22 ENSGT00940000165313 ENSGT00940000156159.d #8 ENSGT00550000074912 #9 ENSGT00910000144250 #10 ENSGT00390000012816 #11 ENSGT00940000155293.b ENSGT00390000008727.a.b #13 ENSGT00390000001071 #14 ENSGT00390000005665 #15 ENSGT00390000006191 #16 ENSGT00390000012837 #17 ENSGT00940000155014 #18 ENSGT00390000013544 #19 ENSGT00950000183050.b.a #20 ENSGT00940000158237 #21 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000158652 ENSGT00940000157224 #26 ENSGT00730000111160 ENSGT00390000012948.b ENSGT01030000234606.a.a.a.b.a.f ENSGT00940000158601 ENSGT00940000161549.b ENSGT00940000161549.a.a ENSGT01030000234606.a.a.a.b.a.e ENSGT01010000222336.a.a.a ENSGT00390000013207 ENSGT00390000004927 ENSGT00940000157393 Leishan spiny toad MODERN SPECIES 4 ENSLLEG00000026975 ENSLLEG00000026950 SLC35F4 (ENSLLEG00000026849) #13 ENSLLEG00000026783 NAA30 (ENSLLEG00000026716) #15 ENSLLEG00000026683 ENSLLEG00000026660 AP5M1 (ENSLLEG00000026523) #16 EXOC5 (ENSLLEG00000026199) #17 ENSLLEG00000026136 ENSLLEG00000026100 OTX2 (ENSLLEG00000025996) #18 TMEM260 (ENSLLEG00000025769) #19 ENSLLEG00000025731 KTN1 (ENSLLEG00000012928) #21 TBPL2 (ENSLLEG00000012095) #22 ATG14 (ENSLLEG00000011935) #23 FBXO34 (ENSLLEG00000011912) #24 ENSLLEG00000011894 LGALS3 (ENSLLEG00000011831) #26 PNN (ENSLLEG00000011755) TRAPPC6B (ENSLLEG00000011677) ENSLLEG00000011432 ENSLLEG00000011248 EHD4 (ENSLLEG00000011126) ENSLLEG00000011103 PALS1 (ENSLLEG00000010995) ENSLLEG00000010978 ENSLLEG00000010955 CRIP2 (ENSLLEG00000010786) ENSLLEG00000010726 Frog MODERN SPECIES 8 armh4 (ENSXETG00000037502) #11 kcnk7 (ENSXETG00000011982) slc35f4 (ENSXETG00000011984) #13 CCDC198 (ENSXETG00000039701) #14 myh4 (ENSXETG00000011987) naa30 (ENSXETG00000011990) #15 ENSXETG00000045414 ap5m1 (ENSXETG00000011994) #16 fbxw9 (ENSXETG00000011995) #17 ENSXETG00000048825 otx2 (ENSXETG00000015687) #18 tmem260 (ENSXETG00000015692) #19 ENSXETG00000047634 peli2 (ENSXETG00000015696) #20 ktn1 (ENSXETG00000015700) #21 tbpl2 (ENSXETG00000015710) #22 atg14 (ENSXETG00000015718) #23 fbxo34 (ENSXETG00000030336) #24 dlgap5 (ENSXETG00000015731) lgals3 (ENSXETG00000036683) #26 pnn (ENSXETG00000015774) ENSXETG00000035915 ENSXETG00000048551 jmjd7-pla2g4b (ENSXETG00000015787) ehd4 (ENSXETG00000015794) ENSXETG00000043093 arhgef3.1 (ENSXETG00000015800) ENSXETG00000000048 jmjd7 (ENSXETG00000037329) mapkbp1 (ENSXETG00000047578) mga (ENSXETG00000000051) Coelacanth MODERN SPECIES 225 IRF2BPL (ENSLACG00000018858) ENSLACG00000018867 TIMM9 (ENSLACG00000018873) #7 ARID4A (ENSLACG00000018876) #8 PSMA3 (ENSLACG00000018893) #9 ACTR10 (ENSLACG00000018903) #10 ENSLACG00000018922 SLC35F4 (ENSLACG00000018940) #13 NAA30 (ENSLACG00000018945) #15 AP5M1 (ENSLACG00000018950) #16 EXOC5 (ENSLACG00000018952) #17 OTX2 (ENSLACG00000018973) #18 TMEM260 (ENSLACG00000018986) #19 PELI2 (ENSLACG00000018999) #20 KTN1 (ENSLACG00000019025) #21 TBPL2 (ENSLACG00000019034) #22 ATG14 (ENSLACG00000019036) #23 FBXO34 (ENSLACG00000019039) #24 ENSLACG00000019042 #26 LGALS3 (ENSLACG00000019044) #26 SOCS4 (ENSLACG00000019050) #28 WDHD1 (ENSLACG00000019053) #29 GCH1 (ENSLACG00000019057) #30 ENSLACG00000019060 SAMD4A (ENSLACG00000019062) #31 CGRRF1 (ENSLACG00000019070) #32 gmfb (ENSLACG00000019071) #33 CNIH1 (ENSLACG00000019072) #34 CDKN3 (ENSLACG00000019073) #35 BMP4 (ENSLACG00000019088) #36 ENSLACG00000019100 Actinopterygii ANCESTRAL SPECIES 87 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169 ENSGT00940000157224 #26 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT00940000158324 ENSGT00490000043421 ENSGT00940000156502 ENSGT00940000159132.a ENSGT00940000158072 ENSGT00940000158704 ENSGT00940000156106 ENSGT00660000095541.a.b Reedfish MODERN SPECIES 7 BAHD1 (ENSECRG00000020375) ENSECRG00000020395 ivd (ENSECRG00000020403) itpka (ENSECRG00000020434) ltk (ENSECRG00000020454) ENSECRG00000020512 ENSECRG00000020524 ENSECRG00000020554 ENSECRG00000020565 haus2 (ENSECRG00000020621) lrrc57 (ENSECRG00000020642) tyro3 (ENSECRG00000020661) ENSECRG00000020689 ENSECRG00000020712 jmjd7 (ENSECRG00000020730) tbpl2 (ENSECRG00000020743) #22 atg14 (ENSECRG00000020767) #23 fbxo34 (ENSECRG00000020794) #24 lgals3b (ENSECRG00000020808) lgals3a (ENSECRG00000020822) #26 ENSECRG00000020837 gmfb (ENSECRG00000020883) #33 cnih1 (ENSECRG00000020904) #34 cdkn3 (ENSECRG00000020930) #35 sos2 (ENSECRG00000020990) l2hgdh (ENSECRG00000021103) dmac2l (ENSECRG00000014785) cdkl1 (ENSECRG00000014811) ENSECRG00000014862 map4k5 (ENSECRG00000015011) atl1 (ENSECRG00000015270) Neopterygii ANCESTRAL SPECIES ENSGT00940000162008 ENSGT00390000003967.a ENSGT00940000158100 ENSGT00940000166410 ENSGT00940000164602 ENSGT00390000007594 ENSGT00390000013762.b.b ENSGT00390000013207 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269 ENSGT00940000160664 ENSGT00940000164564.f.a ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169 ENSGT00940000157224 #26 ENSGT00390000008920.c.a #33 ENSGT00950000182834.A.a.a #34 ENSGT00390000004717 #35 ENSGT01030000239223 ENSGT00940000158324 ENSGT00490000043421 ENSGT00940000156502 ENSGT00940000159132.a ENSGT00940000158072 ENSGT00940000158704 ENSGT00940000156106 Osteoglossocephalai ANCESTRAL SPECIES 13 ENSGT00940000162008 ENSGT00390000003967.a ENSGT00940000158100 ENSGT00940000166410 ENSGT00940000164602 ENSGT00390000007594 ENSGT00390000013762.b.b ENSGT00390000013207 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269 ENSGT00940000160664 ENSGT00940000164564.f.a ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00940000165169.b.b ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00390000017800 ENSGT00940000162043 ENSGT00950000185018 ENSGT00940000161150 Osteoglossiformes ANCESTRAL SPECIES 25 ENSGT00390000014780 ENSGT00940000164128.b ENSGT00390000003967.b ENSGT00940000158100 ENSGT00940000166410 ENSGT00940000164602 ENSGT00390000007594 ENSGT00390000013762.b.b ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269 ENSGT01030000234534.A.d ENSGT00940000164564.f.a ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.b ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00390000017800 ENSGT00940000162043 ENSGT00940000161150 ENSGT00940000161442 ENSGT01030000234987 ENSGT00390000006916.d Asian bonytongue MODERN SPECIES 6 ENSSFOG00015017607 ENSSFOG00015017624 ivd (ENSSFOG00015017635) itpka (ENSSFOG00015017676) ltk (ENSSFOG00015017704) ENSSFOG00015024927 RPAP1 (ENSSFOG00015017757) ENSSFOG00015017815 RYR3 (ENSSFOG00015017847) haus2 (ENSSFOG00015029433) lrrc57 (ENSSFOG00015026376) tyro3 (ENSSFOG00015019936) ENSSFOG00015025292 ENSSFOG00015031269 jmjd7 (ENSSFOG00015019698) tbpl2 (ENSSFOG00015032622) #22 atg14 (ENSSFOG00015019435) #23 fbxo34 (ENSSFOG00015019415) #24 ENSSFOG00015030676 ENSSFOG00015019398 dact1 (ENSSFOG00015019391) si:ch211-185a18.2 (ENSSFOG00015019295) irf2bpl (ENSSFOG00015019340) timm9 (ENSSFOG00015019283) #7 arid4a (ENSSFOG00015019230) #8 psma3 (ENSSFOG00015019194) #9 mipol1 (ENSSFOG00015019142) foxa1 (ENSSFOG00015019128) otol1a (ENSSFOG00015019091) ccdc32 (ENSSFOG00015030812) pcmtl (ENSSFOG00015019062) P. kingsleyae MODERN SPECIES 589 ENSPKIG00000001026 ENSPKIG00000001048 jmjd7 (ENSPKIG00000001085) tbpl2 (ENSPKIG00000001111) #22 atg14 (ENSPKIG00000001142) #23 fbxo34 (ENSPKIG00000001187) #24 ENSPKIG00000001200 ENSPKIG00000001220 ENSPKIG00000001252 #26 Clupeocephala ANCESTRAL SPECIES 14 ENSGT00940000164128.b ENSGT00390000003967.a ENSGT00940000158100 ENSGT00940000166410 ENSGT00940000164602 ENSGT00390000007594 ENSGT00390000013762.b.b ENSGT00390000013207 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT01030000234534.A.d ENSGT00940000164564.f.a ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00390000017800 ENSGT00940000162043 ENSGT00950000185018 ENSGT00940000161150 ENSGT00940000161442 Euteleosteomorpha ANCESTRAL SPECIES 110 ENSGT00390000013207 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT01030000234534.A.d ENSGT00940000164564.f.a ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00390000017800 ENSGT00940000162043 ENSGT00940000161150 ENSGT00940000161442 ENSGT01030000234987 Protacanthopterygii ANCESTRAL SPECIES 22 ENSGT00390000003303 ENSGT00390000015102.a.b ENSGT00940000155554 ENSGT00940000161060 ENSGT00940000153577.B ENSGT00940000156384.o ENSGT00940000159071.y.a ENSGT00940000162083 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT01030000234534.A.d ENSGT00940000164564.f.a ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.b.d ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00940000162596 ENSGT00940000160102.f #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00390000017800 ENSGT00940000162043 ENSGT00940000161150 ENSGT00940000161442 ENSGT01030000234987 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 125 ENSGT00940000159056.h.d ENSGT00940000156287.c ENSGT00940000160635.a ENSGT00940000158937.a.d ENSGT00390000003303.d ENSGT00940000155554.f ENSGT00940000161060.e.b ENSGT00940000161060.f ENSGT00940000153577.B.l ENSGT00940000159071.y.a.u.a.b ENSGT00940000162083.f ENSGT00940000157393.m ENSGT00940000155879.l ENSGT00940000156269.a.a.d ENSGT00940000164564.f.a.d ENSGT00940000159561.k #22 ENSGT00390000011854.b #23 ENSGT00530000064222.b.j #24 ENSGT00950000183181.B.a.c ENSGT00940000156159.l #8 ENSGT00550000074912.hb #9 ENSGT00940000162043.d ENSGT00940000161442.d ENSGT01030000234987.c ENSGT00390000006916.d.b.b ENSGT00550000074824.s ENSGT00390000012799.i ENSGT00940000158135.d ENSGT00950000183000.c.b.j ENSGT00940000154940.k.a ENSGT00390000001332.cb Salmoninae_a ANCESTRAL SPECIES 8 ENSGT00940000156287.c ENSGT00940000160635.a ENSGT00940000158937.a.d ENSGT00390000003303.d ENSGT00940000155554.f ENSGT00990000211133 ENSGT00940000161060.e.b ENSGT00940000153577.B.l ENSGT00940000156384.o.b.a ENSGT00940000159071.y.a.u.a.b ENSGT00940000162083.f ENSGT00940000157393.m ENSGT00940000155879.l ENSGT00940000156269.a.a.d ENSGT00940000164564.f.a.d ENSGT00940000159561.k #22 ENSGT00390000011854.b #23 ENSGT00530000064222.b.j #24 ENSGT00940000165169.b.b.d.b ENSGT00950000183181.B.a.c ENSGT00940000162596 ENSGT00940000160102.e #7 ENSGT00940000156159.l #8 ENSGT00550000074912.hb #9 ENSGT00940000162043.d ENSGT00940000161442.d ENSGT01030000234987.c ENSGT00390000006916.d.b.b ENSGT00550000074824.s ENSGT00390000012799.i ENSGT00940000158135.d Oncorhynchus ANCESTRAL SPECIES 54 ENSGT00940000159056.h.d ENSGT00940000156287.c ENSGT00940000160635.a ENSGT00940000158937.a.d ENSGT00390000003303.d ENSGT00940000155554.f ENSGT00990000211133 ENSGT00940000161060.e.b ENSGT00940000153577.B.l ENSGT00940000159071.y.a.u.a.b ENSGT00940000162083.f ENSGT00940000157393.m ENSGT00940000155879.l ENSGT00940000156269.a.a.d ENSGT00940000164564.f.a.d ENSGT00940000159561.k #22 ENSGT00390000011854.b #23 ENSGT00530000064222.b.j #24 Rainbow trout MODERN SPECIES 17 ENSOMYG00000023257 galcb (ENSOMYG00000023158) vrk1 (ENSOMYG00000023026) ENSOMYG00000022940 BCL11B (ENSOMYG00000022929) setd3 (ENSOMYG00000021671) ENSOMYG00000067158 ENSOMYG00000021360 ENSOMYG00000077281 CCDC85C (ENSOMYG00000021336) HHIPL1 (ENSOMYG00000021149) ENSOMYG00000021099 tyro3 (ENSOMYG00000020877) mgaa (ENSOMYG00000020687) ENSOMYG00000020074 tbpl2 (ENSOMYG00000020011) #22 atg14 (ENSOMYG00000019993) #23 fbxo34 (ENSOMYG00000019986) #24 LGALS3 (ENSOMYG00000019978) #26 dact1 (ENSOMYG00000019967) ENSOMYG00000065040 ENSOMYG00000062140 irf2bpl (ENSOMYG00000019953) ENSOMYG00000019944 arid4a (ENSOMYG00000019447) #8 psma3 (ENSOMYG00000019274) #9 foxa1 (ENSOMYG00000019247) SSTR1 (ENSOMYG00000050236) clec14a (ENSOMYG00000019213) ENSOMYG00000071644 sec23a (ENSOMYG00000019011) Oncorhynchus_a ANCESTRAL SPECIES 60 ENSGT00940000159056.h.d ENSGT00940000156287.c ENSGT00940000160635.a ENSGT00940000158937.a.d ENSGT00390000003303.d ENSGT00940000155554.f ENSGT00990000211133 ENSGT00940000161060.e.b ENSGT00940000153577.B.l ENSGT00940000159071.y.a.u.a.b.a ENSGT00940000162083.f ENSGT00940000157393.m ENSGT00940000155879.l ENSGT00940000156269.a.a.d ENSGT00940000164564.f.a.d ENSGT00940000159561.k #22 ENSGT00390000011854.b #23 ENSGT00530000064222.b.j #24 Coho salmon MODERN SPECIES 5 ENSOKIG00005049909 dicer1 (ENSOKIG00005049936) GSC (ENSOKIG00005050017) FLRT2 (ENSOKIG00005050020) vrk1 (ENSOKIG00005050046) ENSOKIG00005050157 BCL11B (ENSOKIG00005050158) setd3 (ENSOKIG00005050188) ccdc85ca (ENSOKIG00005050206) HHIPL1 (ENSOKIG00005050219) LRRC57 (ENSOKIG00005050233) tyro3 (ENSOKIG00005050239) ENSOKIG00005050263 ENSOKIG00005050302 ENSOKIG00005050318 tbpl2 (ENSOKIG00005050320) #22 atg14 (ENSOKIG00005050323) #23 fbxo34 (ENSOKIG00005050329) #24 LGALS3 (ENSOKIG00005050331) #26 ENSOKIG00005050333 dact1 (ENSOKIG00005050336) irf2bpl (ENSOKIG00005050344) ENSOKIG00005050347 arid4a (ENSOKIG00005050352) #8 psma3 (ENSOKIG00005050365) #9 foxa1 (ENSOKIG00005050373) SSTR1 (ENSOKIG00005012773) clec14a (ENSOKIG00005012778) sec23a (ENSOKIG00005012806) srp54 (ENSOKIG00005012863) zgc:109986 (ENSOKIG00005012891) Chinook salmon MODERN SPECIES 32 TMEM121 (ENSOTSG00005003408) pth2 (ENSOTSG00005003407) RIN3 (ENSOTSG00005003403) ENSOTSG00005003402 sptb (ENSOTSG00005002886) ENSOTSG00005002832 ENSOTSG00005002799 ENSOTSG00005002788 setd3 (ENSOTSG00005002744) ccdc85ca (ENSOTSG00005002730) HHIPL1 (ENSOTSG00005001326) lrrc57 (ENSOTSG00005001305) tyro3 (ENSOTSG00005001276) ENSOTSG00005001243 ENSOTSG00005001202 tbpl2 (ENSOTSG00005001186) #22 atg14 (ENSOTSG00005001180) #23 fbxo34 (ENSOTSG00005001172) #24 LGALS3 (ENSOTSG00005001168) #26 dact1 (ENSOTSG00005001161) irf2bpl (ENSOTSG00005001159) ENSOTSG00005001156 arid4a (ENSOTSG00005000933) #8 psma3 (ENSOTSG00005000793) #9 foxa1 (ENSOTSG00005012905) SSTR1 (ENSOTSG00005012904) clec14a (ENSOTSG00005012903) sec23a (ENSOTSG00005012901) srp54 (ENSOTSG00005012900) zgc:109986 (ENSOTSG00005012899) ENSOTSG00005012898 Salmo ANCESTRAL SPECIES 11 ENSGT00940000160635.a ENSGT00940000158937.a.d ENSGT00390000003303.d ENSGT00940000155554.f ENSGT00990000211133 ENSGT00940000161060.e.b ENSGT00940000161060.f ENSGT00940000153577.B.l ENSGT00940000156384.o.b.a ENSGT00940000159071.y.a.u.a.b ENSGT00940000164056.h ENSGT00940000157393.m ENSGT00940000155879.l ENSGT00940000156269.a.a.d ENSGT00940000164564.f.a.d ENSGT00940000159561.k #22 ENSGT00390000011854.b #23 ENSGT00530000064222.b.j #24 ENSGT00940000165169.b.b.d.b ENSGT00950000183181.B.a.c ENSGT00940000160102.e #7 ENSGT00940000156159.l #8 ENSGT00550000074912.hb #9 ENSGT00940000162043.d ENSGT00940000161442.d ENSGT01030000234987.c ENSGT00390000006916.d.b.b ENSGT00550000074824.s ENSGT00390000012799.i ENSGT00940000158135.d ENSGT00950000183000.c.b.j Atlantic salmon MODERN SPECIES 28 gsc (ENSSSAG00000084092) ENSSSAG00000116745 ENSSSAG00000072022 galcb (ENSSSAG00000071989) vrk1 (ENSSSAG00000072004) ENSSSAG00000106358 ENSSSAG00000064994 BCL11B (ENSSSAG00000071984) ENSSSAG00000119928 setd3 (ENSSSAG00000071960) ccdc85ca (ENSSSAG00000117958) hhipl1 (ENSSSAG00000071651) tyro3 (ENSSSAG00000071619) ENSSSAG00000071609 ENSSSAG00000071598 tbpl2 (ENSSSAG00000071486) #22 atg14 (ENSSSAG00000114319) #23 fbxo34 (ENSSSAG00000103562) #24 ENSSSAG00000071455 DACT1 (ENSSSAG00000071445) arid4a (ENSSSAG00000071199) #8 PSMA3 (ENSSSAG00000071166) #9 ENSSSAG00000117079 foxa1 (ENSSSAG00000071160) SSTR1 (ENSSSAG00000101610) clec14a (ENSSSAG00000071151) sec23a (ENSSSAG00000071046) srp54 (ENSSSAG00000071013) BAZ1A (ENSSSAG00000070981) cfl2 (ENSSSAG00000070963) snx6 (ENSSSAG00000070077) River trout MODERN SPECIES 17 gsc (ENSSTUG00000027920) ENSSTUG00000027926 FLRT2 (ENSSTUG00000027935) galcb (ENSSTUG00000027937) vrk1 (ENSSTUG00000027977) ENSSTUG00000029254 bcl11ba (ENSSTUG00000029272) setd3 (ENSSTUG00000029296) CCNK (ENSSTUG00000029423) ccdc85ca (ENSSTUG00000029447) hhipl1 (ENSSTUG00000029464) lrrc57 (ENSSTUG00000029893) tyro3 (ENSSTUG00000029921) ENSSTUG00000030252 ENSSTUG00000030268 tbpl2 (ENSSTUG00000030446) #22 atg14 (ENSSTUG00000030449) #23 fbxo34 (ENSSTUG00000030456) #24 ENSSTUG00000030460 ENSSTUG00000030473 dact1 (ENSSTUG00000030477) ENSSTUG00000030484 timm9 (ENSSTUG00000030497) #7 arid4a (ENSSTUG00000030518) #8 psma3 (ENSSTUG00000030918) #9 foxa1 (ENSSTUG00000030937) SSTR1 (ENSSTUG00000030944) clec14a (ENSSTUG00000030946) sec23a (ENSSTUG00000030966) srp54 (ENSSTUG00000031042) zgc:109986 (ENSSTUG00000031062) Huchen MODERN SPECIES 1051 ccdc85ca (ENSHHUG00000048530) HHIPL1 (ENSHHUG00000048524) lrrc57 (ENSHHUG00000048521) tyro3 (ENSHHUG00000048504) ENSHHUG00000048496 ENSHHUG00000048487 ENSHHUG00000048486 ENSHHUG00000048469 tbpl2 (ENSHHUG00000048466) #22 atg14 (ENSHHUG00000048457) #23 fbxo34 (ENSHHUG00000048455) #24 LGALS3 (ENSHHUG00000048453) #26 dact1 (ENSHHUG00000048442) Salmoninae ANCESTRAL SPECIES 185 ENSGT00390000015102.a.b ENSGT00940000157454.sc ENSGT00940000155554.e ENSGT00940000161060.e.a ENSGT00940000153577.B.k ENSGT00940000156384.o.b ENSGT00940000159071.y.a.u.a.a ENSGT00940000162083.e ENSGT00940000164056.h ENSGT00390000004927 ENSGT00940000157393.n ENSGT00940000155879.k ENSGT00940000156269.a.a.c ENSGT00940000164564.f.a.c ENSGT00900000141196 ENSGT00940000159561.l #22 ENSGT00390000011854.a #23 ENSGT00530000064222.b.i #24 ENSGT00940000165169.b.b.d ENSGT00950000183181.B.a.d ENSGT00940000162596 ENSGT00940000160102.e #7 ENSGT00390000012397 ENSGT00940000160102.f #7 ENSGT00940000156159.k #8 ENSGT00550000074912.ib #9 ENSGT00390000017800 ENSGT00940000162043.c ENSGT00940000161150 ENSGT00940000161442.c ENSGT01030000234987.d Salmoninae_a ANCESTRAL SPECIES 64 ENSGT00390000015102.a.b ENSGT00940000157454.sc ENSGT00940000155554.e ENSGT00940000161060.e.a ENSGT00940000153577.B.k ENSGT00940000156384.o.b.b ENSGT00940000159071.y.a.u.a.a ENSGT00940000162083.e ENSGT00390000004927 ENSGT00940000157393.n ENSGT00940000155879.k ENSGT00940000156269.a.a.c ENSGT01030000234534.A.d ENSGT00940000164564.f.a.c ENSGT00900000141196 ENSGT00940000159561.l #22 ENSGT00390000011854.a #23 ENSGT00530000064222.b.i #24 ENSGT00940000165169.b.b.d.a ENSGT00950000183181.B.a.d ENSGT00390000012397 ENSGT00940000160102.f #7 ENSGT00940000156159.k #8 ENSGT00550000074912.ib #9 ENSGT00390000017800 ENSGT00940000162043.c ENSGT00940000161150 ENSGT00940000161442.c ENSGT01030000234987.d ENSGT00390000006916.d.b.a ENSGT00940000166955 Oncorhynchus ANCESTRAL SPECIES 6 ENSGT00390000003303.c ENSGT00390000015102.a.b ENSGT00940000157454.sc ENSGT00940000155554.e ENSGT00940000161060.e.a ENSGT00940000153577.B.k ENSGT00940000156384.o.b.b ENSGT00940000159071.y.a.u.a.a ENSGT00940000162083.e ENSGT00390000004927 ENSGT00940000157393.n ENSGT00940000155879.k ENSGT00940000156269.a.a.c ENSGT00940000164564.f.a.c ENSGT00900000141196 ENSGT00940000159561.l #22 ENSGT00390000011854.a #23 ENSGT00530000064222.b.i #24 ENSGT00940000165169.b.b.d.a ENSGT00950000183181.B.a.d ENSGT00390000012397 ENSGT00940000160102.f #7 ENSGT00940000156159.k #8 ENSGT00550000074912.ib.a #9 ENSGT00390000017800 ENSGT00940000162043.c ENSGT00940000161150 ENSGT00940000161442.c ENSGT01030000234987.d ENSGT00390000006916.d.b.a ENSGT00940000166955 Oncorhynchus_a ANCESTRAL SPECIES 10 ENSGT00390000003303.c ENSGT00390000015102.a.b.g ENSGT00940000157454.sc ENSGT00940000155554.e ENSGT00940000161060.e.a ENSGT00940000153577.B.k ENSGT00940000156384.o.b.b ENSGT00940000159071.y.a.u.a.a ENSGT00940000162083.e ENSGT00390000004927 ENSGT00940000157393.n ENSGT00940000155879.k ENSGT00940000156269.a.a.c ENSGT00940000164564.f.a.c ENSGT00900000141196 ENSGT00940000159561.l #22 ENSGT00390000011854.a #23 ENSGT00530000064222.b.i #24 ENSGT00940000165169.b.b.d.a ENSGT00950000183181.B.a.d ENSGT00390000012397 ENSGT00940000160102.f #7 ENSGT00940000156159.k #8 ENSGT00550000074912.ib.a #9 ENSGT00390000017800 ENSGT00940000162043.c ENSGT00940000161150 ENSGT00940000161442.c ENSGT01030000234987.d ENSGT00390000006916.d.b.a ENSGT00940000166955 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 2 gsc (ENSOTSG00005012935) ENSOTSG00005012936 FLRT2 (ENSOTSG00005012938) vrk1 (ENSOTSG00005012951) BCL11B (ENSOTSG00005014030) setd3 (ENSOTSG00005014037) CCNK (ENSOTSG00005014072) ccdc85ca (ENSOTSG00005014087) HHIPL1 (ENSOTSG00005014090) haus2 (ENSOTSG00005014097) lrrc57 (ENSOTSG00005014099) tyro3 (ENSOTSG00005014102) ENSOTSG00005014107 ENSOTSG00005014109 jmjd7 (ENSOTSG00005014198) tbpl2 (ENSOTSG00005014203) #22 atg14 (ENSOTSG00005014229) #23 fbxo34 (ENSOTSG00005014231) #24 ENSOTSG00005014232 dact1 (ENSOTSG00005014234) timm9 (ENSOTSG00005014235) #7 arid4a (ENSOTSG00005014237) #8 psma3 (ENSOTSG00005014241) #9 foxa1 (ENSOTSG00005014260) TTC6 (ENSOTSG00005014261) SSTR1 (ENSOTSG00005014262) clec14a (ENSOTSG00005014263) sec23a (ENSOTSG00005014268) srp54 (ENSOTSG00005014533) BAZ1A (ENSOTSG00005014540) cfl2 (ENSOTSG00005014554) Chinook salmon MODERN SPECIES 46 btg3 (ENSOTSG00005033784) cxadr (ENSOTSG00005033786) AUTS2 (ENSOTSG00005033791) galcb (ENSOTSG00005034041) ak7b (ENSOTSG00005034060) vrk1 (ENSOTSG00005034064) BCL11B (ENSOTSG00005034359) setd3 (ENSOTSG00005034363) CCNK (ENSOTSG00005034628) ccdc85ca (ENSOTSG00005034629) HHIPL1 (ENSOTSG00005034633) haus2 (ENSOTSG00005034636) tyro3 (ENSOTSG00005034640) mgaa (ENSOTSG00005034653) jmjd7 (ENSOTSG00005034656) tbpl2 (ENSOTSG00005034657) #22 atg14 (ENSOTSG00005034725) #23 fbxo34 (ENSOTSG00005034728) #24 ENSOTSG00005034729 dact1 (ENSOTSG00005034730) si:ch211-185a18.2 (ENSOTSG00005034733) timm9 (ENSOTSG00005034734) #7 arid4a (ENSOTSG00005034737) #8 psma3 (ENSOTSG00005034746) #9 foxa1 (ENSOTSG00005034751) TTC6 (ENSOTSG00005034752) SSTR1 (ENSOTSG00005034753) clec14a (ENSOTSG00005034754) sec23a (ENSOTSG00005034756) srp54 (ENSOTSG00005035151) BAZ1A (ENSOTSG00005035155) Coho salmon MODERN SPECIES 27 ak7b (ENSOKIG00005022957) ENSOKIG00005023097 vrk1 (ENSOKIG00005023117) ENSOKIG00005023171 ENSOKIG00005023175 BCL11B (ENSOKIG00005023187) setd3 (ENSOKIG00005023247) CCNK (ENSOKIG00005023387) ccdc85ca (ENSOKIG00005023452) HHIPL1 (ENSOKIG00005023493) haus2 (ENSOKIG00005023736) lrrc57 (ENSOKIG00005023769) tyro3 (ENSOKIG00005023802) mgaa (ENSOKIG00005024140) jmjd7 (ENSOKIG00005024248) tbpl2 (ENSOKIG00005024314) #22 atg14 (ENSOKIG00005024481) #23 fbxo34 (ENSOKIG00005024499) #24 ENSOKIG00005007469 dact1 (ENSOKIG00005007479) si:ch211-185a18.2 (ENSOKIG00005007488) ENSOKIG00005007496 arid4a (ENSOKIG00005007553) #8 mipol1 (ENSOKIG00005008028) PSMA3 (ENSOKIG00005008061) #9 foxa1 (ENSOKIG00005008090) TTC6 (ENSOKIG00005008113) SSTR1 (ENSOKIG00005008212) clec14a (ENSOKIG00005008219) sec23a (ENSOKIG00005008259) ENSOKIG00005008512 Rainbow trout MODERN SPECIES 10 ak7b (ENSOMYG00000058882) ENSOMYG00000063234 vrk1 (ENSOMYG00000035594) BCL11B (ENSOMYG00000035640) setd3 (ENSOMYG00000035725) CCNK (ENSOMYG00000035834) ccdc85ca (ENSOMYG00000035845) ENSOMYG00000058128 HHIPL1 (ENSOMYG00000035903) ENSOMYG00000035975 ENSOMYG00000036000 tyro3 (ENSOMYG00000036098) ENSOMYG00000058060 ENSOMYG00000036303 jmjd7 (ENSOMYG00000036341) tbpl2 (ENSOMYG00000036367) #22 atg14 (ENSOMYG00000036458) #23 fbxo34 (ENSOMYG00000036474) #24 ENSOMYG00000036484 dact1 (ENSOMYG00000036505) si:ch211-185a18.2 (ENSOMYG00000036525) ENSOMYG00000036554 arid4a (ENSOMYG00000036662) #8 psma3 (ENSOMYG00000036901) #9 mipol1 (ENSOMYG00000036864) ENSOMYG00000066785 foxa1 (ENSOMYG00000036917) TTC6 (ENSOMYG00000036934) SSTR1 (ENSOMYG00000036963) clec14a (ENSOMYG00000036972) sec23a (ENSOMYG00000037008) Salmo ANCESTRAL SPECIES 8 ENSGT00390000015102.a.b ENSGT00940000157454.sc ENSGT00940000155554.e ENSGT00940000161060.e.a ENSGT00940000153577.B.k ENSGT00940000156384.o.b.b ENSGT00940000159071.y.a.u.a.a ENSGT00940000162083.e ENSGT00390000004927 ENSGT00940000157393.n ENSGT00940000155879.k ENSGT00940000156269.a.a.c ENSGT01030000234534.A.d ENSGT00940000164564.f.a.c ENSGT00900000141196 ENSGT00940000159561.l #22 ENSGT00390000011854.a #23 ENSGT00530000064222.b.i #24 ENSGT00940000165169.b.b.d.a ENSGT00950000183181.B.a.d ENSGT00940000162596 ENSGT00390000012397 ENSGT00940000165313 ENSGT00940000156159.k #8 ENSGT00550000074912.ib #9 ENSGT00390000017800 ENSGT00940000162043.c ENSGT00940000161150 ENSGT00940000161442.c ENSGT01030000234987.d ENSGT00390000006916.d.b.a River trout MODERN SPECIES 26 vrk1 (ENSSTUG00000050823) ENSSTUG00000050889 ENSSTUG00000050890 setd3 (ENSSTUG00000050894) CCNK (ENSSTUG00000050902) ccdc85ca (ENSSTUG00000050910) HHIPL1 (ENSSTUG00000050923) haus2 (ENSSTUG00000050935) lrrc57 (ENSSTUG00000050936) tyro3 (ENSSTUG00000050937) ENSSTUG00000050941 mgaa (ENSSTUG00000050942) ENSSTUG00000050946 ENSSTUG00000050950 jmjd7 (ENSSTUG00000050960) tbpl2 (ENSSTUG00000050962) #22 atg14 (ENSSTUG00000050964) #23 fbxo34 (ENSSTUG00000050965) #24 ENSSTUG00000050966 ENSSTUG00000050967 si:ch211-185a18.2 (ENSSTUG00000050968) ENSSTUG00000050972 arid4a (ENSSTUG00000050977) #8 psma3 (ENSSTUG00000050989) #9 mipol1 (ENSSTUG00000050990) foxa1 (ENSSTUG00000050992) TTC6 (ENSSTUG00000050993) SSTR1 (ENSSTUG00000050996) clec14a (ENSSTUG00000050997) sec23a (ENSSTUG00000050999) srp54 (ENSSTUG00000051000) Huchen MODERN SPECIES 766 ENSHHUG00000019995 ENSHHUG00000020004 ENSHHUG00000020009 jmjd7 (ENSHHUG00000020019) tbpl2 (ENSHHUG00000020136) #22 atg14 (ENSHHUG00000020336) #23 fbxo34 (ENSHHUG00000020353) #24 ENSHHUG00000020355 dact1 (ENSHHUG00000020364) si:ch211-185a18.2 (ENSHHUG00000020366) irf2bpl (ENSHHUG00000020373) timm9 (ENSHHUG00000020406) #7 ENSHHUG00000020417 #8 ENSHHUG00000020423 #8 psma3 (ENSHHUG00000020437) #9 mipol1 (ENSHHUG00000020623) ENSHHUG00000020659 foxa1 (ENSHHUG00000020665) ENSHHUG00000020671 ENSHHUG00000020686 Northern pike MODERN SPECIES 14 ENSELUG00000024441 ak7b (ENSELUG00000024511) ENSELUG00000031927 vrk1 (ENSELUG00000024553) BCL11B (ENSELUG00000001427) setd3 (ENSELUG00000002605) ENSELUG00000002617 ccdc85ca (ENSELUG00000002627) hhipl1 (ENSELUG00000002679) haus2 (ENSELUG00000002716) atg14 (ENSELUG00000002940) #23 tyro3 (ENSELUG00000002758) ENSELUG00000000072 ENSELUG00000002809 jmjd7 (ENSELUG00000002888) tbpl2 (ENSELUG00000002911) #22 ENSELUG00000030417 fbxo34 (ENSELUG00000002952) #24 ENSELUG00000002974 ENSELUG00000002968 dact1 (ENSELUG00000002982) si:ch211-185a18.2 (ENSELUG00000003051) timm9 (ENSELUG00000003059) #7 arid4a (ENSELUG00000003087) #8 psma3 (ENSELUG00000003123) #9 mipol1 (ENSELUG00000003145) foxa1 (ENSELUG00000003158) ENSELUG00000003227 SSTR1 (ENSELUG00000003269) clec14a (ENSELUG00000003274) sec23a (ENSELUG00000003344) Acanthomorphata ANCESTRAL SPECIES 117 ENSGT00940000156572 ENSGT00390000006205.b ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00390000013207 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT00940000164564.f.a ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00940000162596 ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 Euacanthomorphacea ANCESTRAL SPECIES 52 ENSGT00940000156572 ENSGT00390000006205.b ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00390000013207 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT00940000164564.f.a ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00940000166431 ENSGT00390000012799 Percomorphaceae DUPLICATION Percomorphaceae ANCESTRAL SPECIES 51 ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000158601 ENSGT00940000161549.a.a ENSGT00940000160678.a ENSGT00950000183024.a.b.a ENSGT00390000001332 ENSGT00390000002766.b.b ENSGT00940000158745 ENSGT00940000158051 ENSGT00810000125473.B ENSGT00940000154553.a.b ENSGT00950000183193.B ENSGT00940000153431.a.v.a ENSGT00940000153431.a.v.b ENSGT00970000193421.B Tiger tail seahorse MODERN SPECIES 43 cfl2 (ENSHCOG00000021173) ENSHCOG00000021171 snx6 (ENSHCOG00000021168) psma3 (ENSHCOG00000021162) #9 ENSHCOG00000021160 #8 ENSHCOG00000021157 #8 timm9 (ENSHCOG00000021153) #7 irf2bpl (ENSHCOG00000021152) lgals3b (ENSHCOG00000021150) fbxo34 (ENSHCOG00000021148) #24 jmjd7 (ENSHCOG00000021147) lrrc57 (ENSHCOG00000021145) tyro3 (ENSHCOG00000021144) ENSHCOG00000021141 ENSHCOG00000021138 tbpl2 (ENSHCOG00000021135) #22 atg14 (ENSHCOG00000021133) #23 ENSHCOG00000021130 srp54 (ENSHCOG00000021127) sec23a (ENSHCOG00000021122) ENSHCOG00000021120 ENSHCOG00000021119 ENSHCOG00000021117 ENSHCOG00000021116 traf3 (ENSHCOG00000021113) rcor1 (ENSHCOG00000021111) ENSHCOG00000021110 ENSHCOG00000021107 ENSHCOG00000021106 ENSHCOG00000021104 dkc1 (ENSHCOG00000021099) Percomorphaceae_B ANCESTRAL SPECIES 32 ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 Ovalentaria ANCESTRAL SPECIES 10 ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.a.b ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00940000161442 ENSGT00940000155999.f ENSGT00390000014940 Ovalentaria_B ANCESTRAL SPECIES 24 ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00940000161442 ENSGT00940000155999.f ENSGT00390000017800 ENSGT00390000014940 Pomacentridae ANCESTRAL SPECIES 78 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00390000012397 ENSGT00940000162596 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT01030000234930 ENSGT00940000161442 ENSGT00940000155999.f ENSGT00390000017800 ENSGT00390000014940 Bicolor damselfish MODERN SPECIES 325 dhrs13a.2 (ENSSPAG00000004890) ENSSPAG00000004851 slc3a2b (ENSSPAG00000004822) zgc:109986 (ENSSPAG00000004813) BAZ1A (ENSSPAG00000004699) cfl2 (ENSSPAG00000004688) snx6 (ENSSPAG00000004652) psma3 (ENSSPAG00000004606) #9 arid4a (ENSSPAG00000004467) #8 timm9 (ENSSPAG00000004448) #7 irf2bpl (ENSSPAG00000004425) dact1 (ENSSPAG00000004415) lgals3b (ENSSPAG00000004402) fbxo34 (ENSSPAG00000004386) #24 jmjd7 (ENSSPAG00000004355) tbpl2 (ENSSPAG00000004314) #22 atg14 (ENSSPAG00000004249) #23 ENSSPAG00000004182 ENSSPAG00000004150 ENSSPAG00000004079 tyro3 (ENSSPAG00000003789) lrrc57 (ENSSPAG00000003729) Pomacentridae_A ANCESTRAL SPECIES 93 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00390000012397 ENSGT00940000162596 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT00940000166602.A Spiny chromis MODERN SPECIES 307 slc3a2b (ENSAPOG00000018512) zgc:109986 (ENSAPOG00000018525) ENSAPOG00000000511 ENSAPOG00000018689 cfl2 (ENSAPOG00000018709) ENSAPOG00000018738 snx6 (ENSAPOG00000018791) psma3 (ENSAPOG00000018846) #9 arid4a (ENSAPOG00000018856) #8 timm9 (ENSAPOG00000018873) #7 si:ch211-185a18.2 (ENSAPOG00000000902) dact1 (ENSAPOG00000018896) lgals3b (ENSAPOG00000018904) fbxo34 (ENSAPOG00000018908) #24 jmjd7 (ENSAPOG00000018964) tbpl2 (ENSAPOG00000019081) #22 atg14 (ENSAPOG00000019151) #23 ENSAPOG00000019172 ENSAPOG00000019224 ENSAPOG00000019267 ENSAPOG00000019344 Cichlidae ANCESTRAL SPECIES 71 ENSGT00940000165313 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT01030000234930 ENSGT00940000155999.f ENSGT00390000017800 ENSGT00390000014940 ENSGT00940000163836.b Pseudocrenilabrinae ANCESTRAL SPECIES 8 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00390000008624 ENSGT00940000165313 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT01030000234930 ENSGT00940000155999.f ENSGT00390000017800 ENSGT00390000014940 ENSGT00940000163836.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT01030000234592.A.b.a ENSGT00390000017365.b.bc.a.a ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT01030000234930 ENSGT00940000155999.f ENSGT00390000017800 ENSGT00390000014940 ENSGT00940000163836.b Haplochromini ANCESTRAL SPECIES 7 ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.C ENSGT01030000234592.A.b.a ENSGT00390000017365.b.bc.a.a.c ENSGT00390000017365.b.ac.a.b ENSGT00990000207027 ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT01030000234930 ENSGT00940000155999.f ENSGT00390000017800 ENSGT00390000014940 ENSGT00940000163836.b Haplochromini_A ANCESTRAL SPECIES 7 ENSGT00390000004599.g ENSGT00940000160140.b ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00950000183136.a.a ENSGT00940000154785.C ENSGT00940000154785.A ENSGT00940000156087.b ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT01030000234930 ENSGT00940000155999.f ENSGT00390000017800 ENSGT00390000014940 ENSGT00940000163836.b Haplochromini_B ANCESTRAL SPECIES 80 ENSGT00940000165313.f ENSGT00390000008624 ENSGT00390000004599.g ENSGT00940000160140.b.s ENSGT00390000009688 ENSGT00590000083139.c ENSGT00390000002237 ENSGT00940000154785.A ENSGT00940000156087.b.e ENSGT00940000165313.e ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT01030000234930 ENSGT00940000155999.f ENSGT00390000017800 ENSGT00390000014940 ENSGT00940000163836.b Zebra mbuna MODERN SPECIES 108 ENSMZEG00005027542 si:ch211-185a18.2 (ENSMZEG00005027541) dact1 (ENSMZEG00005027540) lgals3b (ENSMZEG00005027539) fbxo34 (ENSMZEG00005027538) #24 jmjd7 (ENSMZEG00005027537) tbpl2 (ENSMZEG00005027536) #22 atg14 (ENSMZEG00005027535) #23 ENSMZEG00005027534 ENSMZEG00005027533 tyro3 (ENSMZEG00005027532) ENSMZEG00005027531 sec23a (ENSMZEG00005027530) srp54 (ENSMZEG00005027528) ENSMZEG00005027527 lrrc57 (ENSMZEG00005027526) ENSMZEG00005027525 ENSMZEG00005027524 Eastern happy MODERN SPECIES 10 GDF7 (ENSACLG00000017277) ldah (ENSACLG00000017167) APOB (ENSACLG00000017073) DGLUCY (ENSACLG00000017007) GPR68 (ENSACLG00000016959) GPR68 (ENSACLG00000016923) ENSACLG00000016915 ccdc88c (ENSACLG00000016821) PALS1 (ENSACLG00000016771) ENSACLG00000016756 ENSACLG00000016666 dact1 (ENSACLG00000016623) lgals3b (ENSACLG00000016608) fbxo34 (ENSACLG00000016607) #24 jmjd7 (ENSACLG00000016557) tbpl2 (ENSACLG00000016498) #22 atg14 (ENSACLG00000016428) #23 ENSACLG00000016408 ENSACLG00000016339 mgaa (ENSACLG00000016295) tyro3 (ENSACLG00000016238) ENSACLG00000016223 sec23a (ENSACLG00000016100) srp54 (ENSACLG00000015866) ENSACLG00000015844 lrrc57 (ENSACLG00000015813) ENSACLG00000015807 ENSACLG00000015801 ENSACLG00000015785 C5orf63 (ENSACLG00000015778) traf3 (ENSACLG00000015705) P. nyererei MODERN SPECIES 619 ldah (ENSPNYG00000005253) APOB (ENSPNYG00000005650) DGLUCY (ENSPNYG00000006479) GPR68 (ENSPNYG00000006601) ENSPNYG00000006751 ENSPNYG00000006832 ENSPNYG00000006915 ENSPNYG00000007188 PALS1 (ENSPNYG00000007488) ENSPNYG00000007669 irf2bpl (ENSPNYG00000007722) dact1 (ENSPNYG00000007793) lgals3b (ENSPNYG00000007984) fbxo34 (ENSPNYG00000008075) #24 jmjd7 (ENSPNYG00000008163) tbpl2 (ENSPNYG00000008385) #22 atg14 (ENSPNYG00000008634) #23 ENSPNYG00000008861 mgaa (ENSPNYG00000008961) tyro3 (ENSPNYG00000009180) sec23a (ENSPNYG00000009430) ENSPNYG00000009645 srp54 (ENSPNYG00000009717) ENSPNYG00000009898 lrrc57 (ENSPNYG00000009956) ENSPNYG00000010031 Burton s mouthbrooder MODERN SPECIES 811 ENSHBUG00000000127 irf2bpl (ENSHBUG00000005047) DACT1 (ENSHBUG00000005147) lgals3b (ENSHBUG00000005186) fbxo34 (ENSHBUG00000005200) #24 jmjd7 (ENSHBUG00000005224) tbpl2 (ENSHBUG00000005263) #22 atg14 (ENSHBUG00000000131) #23 ENSHBUG00000005328 ENSHBUG00000005344 ENSHBUG00000005361 tyro3 (ENSHBUG00000005543) ENSHBUG00000005574 sec23a (ENSHBUG00000005643) srp54 (ENSHBUG00000005678) ENSHBUG00000005696 lrrc57 (ENSHBUG00000005712) ENSHBUG00000005721 Lyretail cichlid MODERN SPECIES 363 ENSNBRG00000007052 ENSNBRG00000006980 DGLUCY (ENSNBRG00000006911) GPR68 (ENSNBRG00000006875) ENSNBRG00000006855 ENSNBRG00000006825 ENSNBRG00000006810 PALS1 (ENSNBRG00000006800) ENSNBRG00000006789 timm9 (ENSNBRG00000006771) #7 irf2bpl (ENSNBRG00000006764) dact1 (ENSNBRG00000006732) lgals3b (ENSNBRG00000006724) fbxo34 (ENSNBRG00000006700) #24 jmjd7 (ENSNBRG00000006670) tbpl2 (ENSNBRG00000006596) #22 atg14 (ENSNBRG00000006547) #23 ENSNBRG00000006455 ENSNBRG00000006420 tyro3 (ENSNBRG00000006213) ENSNBRG00000006158 sec23a (ENSNBRG00000006062) ENSNBRG00000006045 srp54 (ENSNBRG00000006000) ENSNBRG00000005983 ENSNBRG00000005973 lrrc57 (ENSNBRG00000005957) ENSNBRG00000005948 ENSNBRG00000005906 C5orf63 (ENSNBRG00000005891) traf3 (ENSNBRG00000005713) Nile tilapia MODERN SPECIES 10 APOB (ENSONIG00000011699) DGLUCY (ENSONIG00000011704) ENSONIG00000038519 GPR68 (ENSONIG00000011710) ENSONIG00000011722 ccdc88c (ENSONIG00000011715) PALS1 (ENSONIG00000011723) ENSONIG00000040790 ENSONIG00000033489 irf2bpl (ENSONIG00000038269) ENSONIG00000011732 dact1 (ENSONIG00000011734) lgals3b (ENSONIG00000011737) fbxo34 (ENSONIG00000033485) #24 jmjd7 (ENSONIG00000011740) tbpl2 (ENSONIG00000011742) #22 atg14 (ENSONIG00000011743) #23 ENSONIG00000011745 ENSONIG00000041427 tyro3 (ENSONIG00000011751) sec23a (ENSONIG00000011758) srp54 (ENSONIG00000011768) ENSONIG00000011776 lrrc57 (ENSONIG00000038185) ENSONIG00000020536 ENSONIG00000034290 ENSONIG00000037687 ENSONIG00000032688 ENSONIG00000030494 traf3 (ENSONIG00000011785) rcor1 (ENSONIG00000011789) Midas cichlid MODERN SPECIES 325 alkbh1 (ENSACIG00000000165) slirp (ENSACIG00000023083) timm9 (ENSACIG00000023079) #7 irf2bpl (ENSACIG00000023066) dact1 (ENSACIG00000023046) lgals3b (ENSACIG00000023027) fbxo34 (ENSACIG00000023023) #24 jmjd7 (ENSACIG00000023001) tbpl2 (ENSACIG00000022967) #22 atg14 (ENSACIG00000022956) #23 ENSACIG00000022948 ENSACIG00000022938 tyro3 (ENSACIG00000022877) ENSACIG00000022865 sec23a (ENSACIG00000022846) srp54 (ENSACIG00000022831) ENSACIG00000022817 lrrc57 (ENSACIG00000022804) ENSACIG00000022800 ENSACIG00000022797 C5orf63 (ENSACIG00000022791) traf3 (ENSACIG00000022725) rcor1 (ENSACIG00000022713) ankrd9 (ENSACIG00000022704) Atherinomorphae ANCESTRAL SPECIES 39 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00940000165313 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.a.b ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00940000155999.f ENSGT00390000014940 ENSGT00390000017800 Oryzias ANCESTRAL SPECIES 3 ENSGT00940000155999.f ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT00390000006916.d.a.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT00940000164564.f.a.i.b ENSGT00940000164564.f.a.i.a ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00390000011854 #23 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00390000012799 ENSGT00940000156646.d ENSGT00940000158601 Oryzias_b ANCESTRAL SPECIES 12 ENSGT00940000163836.b ENSGT00390000014940 ENSGT00390000017800 ENSGT00940000155999.f ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT00940000164564.f.a.i.b ENSGT00940000164564.f.a.i.a ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00390000011854 #23 ENSGT00940000159561.m #22 ENSGT00900000141196 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00390000012799 ENSGT00940000156646.d Javanese ricefish MODERN SPECIES 14 ENSOJAG00000018946 traf3 (ENSOJAG00000018863) C5orf63 (ENSOJAG00000018843) mipol1 (ENSOJAG00000018800) ENSOJAG00000018785 ENSOJAG00000018739 sec23a (ENSOJAG00000018656) srp54 (ENSOJAG00000018632) ENSOJAG00000018628 lrrc57 (ENSOJAG00000018619) tyro3 (ENSOJAG00000018371) ENSOJAG00000018338 ENSOJAG00000018183 ENSOJAG00000018125 atg14 (ENSOJAG00000018074) #23 tbpl2 (ENSOJAG00000018061) #22 jmjd7 (ENSOJAG00000018049) fbxo34 (ENSOJAG00000018033) #24 lgals3b (ENSOJAG00000017991) ENSOJAG00000017941 ENSOJAG00000017930 ENSOJAG00000017907 arid4a (ENSOJAG00000017865) #8 psma3 (ENSOJAG00000017765) #9 snx6 (ENSOJAG00000017479) cfl2 (ENSOJAG00000017459) zgc:109986 (ENSOJAG00000017424) ENSOJAG00000017419 ehd4 (ENSOJAG00000017357) g2e3 (ENSOJAG00000017345) scfd1 (ENSOJAG00000016699) Indian medaka MODERN SPECIES C5orf63 (ENSOMEG00000021049) ENSOMEG00000021038 ENSOMEG00000021025 sec23a (ENSOMEG00000021009) ENSOMEG00000020971 ENSOMEG00000020963 srp54 (ENSOMEG00000020952) ENSOMEG00000020910 lrrc57 (ENSOMEG00000020880) tyro3 (ENSOMEG00000020823) ENSOMEG00000020768 ENSOMEG00000020709 ENSOMEG00000020559 ENSOMEG00000020475 atg14 (ENSOMEG00000020206) #23 tbpl2 (ENSOMEG00000020157) #22 jmjd7 (ENSOMEG00000020141) fbxo34 (ENSOMEG00000020131) #24 lgals3b (ENSOMEG00000000530) DACT1 (ENSOMEG00000020108) ENSOMEG00000020089 irf2bpl (ENSOMEG00000020036) timm9 (ENSOMEG00000020017) #7 ENSOMEG00000019997 #8 ENSOMEG00000019966 #8 psma3 (ENSOMEG00000019957) #9 snx6 (ENSOMEG00000019916) cfl2 (ENSOMEG00000019883) BAZ1A (ENSOMEG00000019851) zgc:109986 (ENSOMEG00000019806) ENSOMEG00000019786 Oryzias_a ANCESTRAL SPECIES 11 ENSGT00940000155999.f ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT00390000006916.d.a.b ENSGT00550000074824 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT00940000164564.f.a.i.b ENSGT00940000164564.f.a.i.a ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00390000011854 #23 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000165313 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00940000154940 ENSGT00950000183000.c.b ENSGT00940000158135 ENSGT00390000012799 ENSGT00940000156646.d ENSGT00940000158601 Japanese Medaka HdrR MODERN SPECIES 14 ENSORLG00000019506 ENSORLG00000027673 ENSORLG00000020123 ENSORLG00000026311 ENSORLG00000025714 SRP54 (ENSORLG00000010027) ENSORLG00000024769 lrrc57 (ENSORLG00000010037) tyro3 (ENSORLG00000010056) ENSORLG00000010072 ENSORLG00000022155 ENSORLG00000010109 ENSORLG00000025253 atg14 (ENSORLG00000010114) #23 jmjd7 (ENSORLG00000010130) tbpl2 (ENSORLG00000028018) #22 fbxo34 (ENSORLG00000023986) #24 lgals3b (ENSORLG00000028430) ENSORLG00000010158 ENSORLG00000023322 ENSORLG00000021949 ENSORLG00000027454 #8 ENSORLG00000010245 #8 psma3 (ENSORLG00000010288) #9 snx6 (ENSORLG00000010318) cfl2 (ENSORLG00000010332) BAZ1A (ENSORLG00000010374) zgc:109986 (ENSORLG00000010399) ENSORLG00000010405 ehd4 (ENSORLG00000010433) g2e3 (ENSORLG00000010482) Chinese medaka MODERN SPECIES 631 tecpr2 (ENSOSIG00000018281) ankrd9 (ENSOSIG00000018270) rcor1 (ENSOSIG00000018267) traf3 (ENSOSIG00000018232) C5orf63 (ENSOSIG00000018222) ENSOSIG00000018219 ENSOSIG00000018217 ENSOSIG00000018212 srp54 (ENSOSIG00000018208) ENSOSIG00000018204 lrrc57 (ENSOSIG00000018200) tyro3 (ENSOSIG00000018184) ENSOSIG00000018164 ENSOSIG00000018140 atg14 (ENSOSIG00000018138) #23 tbpl2 (ENSOSIG00000018132) #22 fbxo34 (ENSOSIG00000018122) #24 lgals3b (ENSOSIG00000018121) DACT1 (ENSOSIG00000018120) irf2bpl (ENSOSIG00000018078) timm9 (ENSOSIG00000018069) #7 ENSOSIG00000018060 #8 psma3 (ENSOSIG00000018012) #9 snx6 (ENSOSIG00000017956) cfl2 (ENSOSIG00000017937) zgc:109986 (ENSOSIG00000017928) ENSOSIG00000017806 ehd4 (ENSOSIG00000017520) g2e3 (ENSOSIG00000017364) coch (ENSOSIG00000017074) strn3 (ENSOSIG00000013379) Cyprinodontiformes ANCESTRAL SPECIES 40 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00940000155999.f ENSGT00390000017800 ENSGT00390000014940 ENSGT00940000163836.b Cyprinodontoidei ANCESTRAL SPECIES 51 ENSGT00940000155369.A.d.a ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00940000155999.f ENSGT00390000017800 ENSGT00390000014940 ENSGT00940000163836.b NAME_4 ANCESTRAL SPECIES 124 ENSGT00940000155369.A.d.a ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00940000155999.f ENSGT00390000017800 ENSGT00390000014940 ENSGT00940000163836.b Mummichog MODERN SPECIES 604 MDGA2 (ENSFHEG00000005832) tbpl2 (ENSFHEG00000005840) #22 atg14 (ENSFHEG00000005896) #23 ENSFHEG00000005917 ENSFHEG00000005935 ENSFHEG00000005981 ENSFHEG00000006014 Sheepshead minnow MODERN SPECIES 222 mocs1 (ENSCVAG00000010917) zgc:112255 (ENSCVAG00000010891) ppp2r5eb (ENSCVAG00000010873) SGPP1 (ENSCVAG00000010830) ENSCVAG00000010758 ENSCVAG00000010732 esr2b (ENSCVAG00000010717) ENSCVAG00000010681 ENSCVAG00000010661 ENSCVAG00000010630 ENSCVAG00000010610 ENSCVAG00000010602 gphb5 (ENSCVAG00000010590) KCNH5 (ENSCVAG00000010579) ENSCVAG00000010544 tbpl2 (ENSCVAG00000010516) #22 atg14 (ENSCVAG00000010503) #23 ENSCVAG00000010483 ENSCVAG00000010454 ENSCVAG00000010443 tyro3 (ENSCVAG00000010428) lrrc57 (ENSCVAG00000010419) ENSCVAG00000010402 srp54 (ENSCVAG00000010395) sec23a (ENSCVAG00000010369) ENSCVAG00000010296 ENSCVAG00000010291 ENSCVAG00000010286 mipol1 (ENSCVAG00000010269) ENSCVAG00000010261 ENSCVAG00000010254 Poeciliinae ANCESTRAL SPECIES 63 ENSGT00940000154553.a.b ENSGT00950000183193.B ENSGT00940000153168.A ENSGT00530000069038.a.b ENSGT00940000153431.a.v.b ENSGT00940000178522 ENSGT00940000153431.a.v.a ENSGT00390000011854 #23 ENSGT00940000159561.m #22 ENSGT00940000155369.A.d.a ENSGT00730000111179.b Poecilia ANCESTRAL SPECIES 115 ENSGT00940000154553.a.b ENSGT00950000183193.B ENSGT00940000153168.A ENSGT00530000069038.a.b ENSGT00940000153431.a.v.b ENSGT00940000153431.a.v.a ENSGT00390000011854 #23 ENSGT00940000159561.m #22 ENSGT00940000155369.A.d.a ENSGT00730000111179.b Guppy MODERN SPECIES 453 ENSPREG00000002254 ARHGAP5 (ENSPREG00000002281) nubpl (ENSPREG00000002321) ENSPREG00000002337 ENSPREG00000002365 dtd2 (ENSPREG00000002377) atg14 (ENSPREG00000002392) #23 tbpl2 (ENSPREG00000002441) #22 MDGA2 (ENSPREG00000002460) ENSPREG00000002485 esr2b (ENSPREG00000002510) ENSPREG00000002518 ENSPREG00000002544 ENSPREG00000002598 ENSPREG00000002659 SGPP1 (ENSPREG00000002668) ppp2r5eb (ENSPREG00000002688) snapc1b (ENSPREG00000002744) AKAP6 (ENSPREG00000002776) NPAS3 (ENSPREG00000002851) egln3 (ENSPREG00000002945) sptssa (ENSPREG00000002968) eapp (ENSPREG00000002981) NAME_6 ANCESTRAL SPECIES 587 ENSGT00940000153431.a.v.a ENSGT00390000011854 #23 ENSGT00940000159561.m #22 Amazon molly MODERN SPECIES 821 dtd2 (ENSPFOG00000001517) atg14 (ENSPFOG00000001257) #23 ENSPFOG00000001118 #22 ENSPFOG00000023472 ENSPFOG00000023327 Sailfin molly MODERN SPECIES 2429 ENSPLAG00000015309 #22 Platyfish MODERN SPECIES 10 ptbp1a (ENSXMAG00000015925) palm1b (ENSXMAG00000015943) plppr3a (ENSXMAG00000015944) ENSXMAG00000024090 cldn11a (ENSXMAG00000015971) slc7a14a (ENSXMAG00000015976) ENSXMAG00000030078 ARHGAP5 (ENSXMAG00000004945) nubpl (ENSXMAG00000009451) yipf6 (ENSXMAG00000028556) ENSXMAG00000027660 ENSXMAG00000026530 ENSXMAG00000022823 dtd2 (ENSXMAG00000019126) atg14 (ENSXMAG00000019122) #23 tbpl2 (ENSXMAG00000001362) #22 MDGA2 (ENSXMAG00000027115) ENSXMAG00000023583 gphb5 (ENSXMAG00000028712) Aplocheiloidei ANCESTRAL SPECIES 421 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 Mangrove rivulus MODERN SPECIES 976 tbpl2 (ENSKMAG00000013324) #22 atg14 (ENSKMAG00000013372) #23 Turquoise killifish MODERN SPECIES 1625 snx6 (ENSNFUG00015016014) CFL2 (ENSNFUG00015015955) Nfu_g_1_021746 (ENSNFUG00015015910) ENSNFUG00015015903 ehd4 (ENSNFUG00015015073) G2E3 (ENSNFUG00015014986) SLY1 (ENSNFUG00015013309) ENSNFUG00015013270 ENSNFUG00015013267 coch (ENSNFUG00015013227) strn3 (ENSNFUG00015012868) ENSNFUG00015012844 ENSNFUG00015012840 HECTD1 (ENSNFUG00015012796) MDGA2 (ENSNFUG00015012518) tbpl2 (ENSNFUG00015012481) #22 TBPL2 (ENSNFUG00015012475) #23 letm1 (ENSNFUG00015011439) nsd2 (ENSNFUG00015011241) jade1 (ENSNFUG00015011192) ENSNFUG00015011180 asmt2 (ENSNFUG00015011105) PGRMC2 (ENSNFUG00015011040) LARP1B (ENSNFUG00015010949) ahsa1b (ENSNFUG00015010902) cdca4 (ENSNFUG00015010900) si:dkey-177p2.6 (ENSNFUG00015010892) ENSNFUG00015010885 ENSNFUG00015010878 ENSNFUG00015010859 PANK2 (ENSNFUG00015010816) Percomorphaceae_C ANCESTRAL SPECIES 26 ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 Eupercaria ANCESTRAL SPECIES 9 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00940000155599.i.b ENSGT00940000155599.i.a.b ENSGT00390000004056 ENSGT00390000006205.b ENSGT00940000156572 Tetraodontidae ANCESTRAL SPECIES 3 ENSGT00390000017800 ENSGT00940000155999.f ENSGT01030000234930 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.e.a ENSGT00940000155599.i.b ENSGT00390000004056 ENSGT00940000156572 ENSGT00970000193421.B ENSGT00950000183095.a.b.a.a ENSGT00940000168627 ENSGT00550000074845 ENSGT00940000159386 ENSGT00940000158601 ENSGT00940000160678.a ENSGT00950000183024.a.b.a ENSGT00390000001332 Tetraodon MODERN SPECIES 26 mipol1 (ENSTNIG00000000967) ENSTNIG00000002587 ENSTNIG00000000952 sec23a (ENSTNIG00000002588) srp54 (ENSTNIG00000002589) zgc:109986 (ENSTNIG00000002590) ENSTNIG00000002591 ENSTNIG00000000632 cfl2 (ENSTNIG00000000381) snx6 (ENSTNIG00000002592) psma3 (ENSTNIG00000001368) #9 arid4a (ENSTNIG00000002593) #8 timm9 (ENSTNIG00000002594) #7 lgals3b (ENSTNIG00000002595) jmjd7 (ENSTNIG00000002596) tbpl2 (ENSTNIG00000002597) #22 atg14 (ENSTNIG00000002598) #23 ENSTNIG00000002599 lrrc57 (ENSTNIG00000002600) ENSTNIG00000002601 haus2 (ENSTNIG00000001117) dhrs13a.2 (ENSTNIG00000002602) hikeshi (ENSTNIG00000002603) HEATR5A (ENSTNIG00000002604) hectd1 (ENSTNIG00000002605) ap4s1 (ENSTNIG00000002606) strn3 (ENSTNIG00000002607) g2e3 (ENSTNIG00000002608) ENSTNIG00000002609 ENSTNIG00000002610 ENSTNIG00000000161 Fugu MODERN SPECIES 11 mipol1 (ENSTRUG00000026268) ENSTRUG00000006136 ENSTRUG00000023115 sec23a (ENSTRUG00000006196) srp54 (ENSTRUG00000007057) zgc:109986 (ENSTRUG00000007421) BAZ1A (ENSTRUG00000007498) cfl2 (ENSTRUG00000007799) snx6 (ENSTRUG00000007861) psma3 (ENSTRUG00000008340) #9 arid4a (ENSTRUG00000008557) #8 timm9 (ENSTRUG00000019688) #7 lgals3b (ENSTRUG00000009104) fbxo34 (ENSTRUG00000020409) #24 jmjd7 (ENSTRUG00000009235) trf3 (ENSTRUG00000009283) #22 atg14 (ENSTRUG00000023016) #23 ENSTRUG00000028990 ENSTRUG00000028870 lrrc57 (ENSTRUG00000010341) ENSTRUG00000010421 haus2 (ENSTRUG00000023669) dhrs13a.2 (ENSTRUG00000010572) hikeshi (ENSTRUG00000025477) hectd1 (ENSTRUG00000011055) ap4s1 (ENSTRUG00000011227) strn3 (ENSTRUG00000011310) ENSTRUG00000011636 scfd1 (ENSTRUG00000011884) coch (ENSTRUG00000027600) ehd4 (ENSTRUG00000022398) Eupecaria_A ANCESTRAL SPECIES 10 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00940000155599.i.b ENSGT00940000155599.i.a.b ENSGT00390000004056 ENSGT00390000006205.b ENSGT00940000156572 Eupecaria_B ANCESTRAL SPECIES 11 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00940000155599.i.b ENSGT00940000155599.i.a.b ENSGT00390000004056 ENSGT00390000006205.b ENSGT00940000156572 Eupecaria_C ANCESTRAL SPECIES 8 ENSGT00390000006205.b ENSGT00390000004056 ENSGT00940000155599.i.a.b ENSGT00940000155599.i.b ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT00940000164564.f.a ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 Eupercaria_incertae_sedis ANCESTRAL SPECIES 110 ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 European seabass MODERN SPECIES 3 ENSDLAG00005028170 ENSDLAG00005030741 ENSDLAG00005027873 ENSDLAG00005028537 ENSDLAG00005029600 ENSDLAG00005018471 psma3 (ENSDLAG00005016689) #9 arid4a (ENSDLAG00005034746) #8 timm9 (ENSDLAG00005028547) #7 si:ch211-185a18.2 (ENSDLAG00005027940) ENSDLAG00005032940 ENSDLAG00005028506 ENSDLAG00005027035 ENSDLAG00005030363 atg14 (ENSDLAG00005029912) #23 ENSDLAG00005011959 #22 ENSDLAG00005032201 ENSDLAG00005021750 ENSDLAG00005003892 ENSDLAG00005034732 ENSDLAG00005028427 ENSDLAG00005002624 ENSDLAG00005031907 ENSDLAG00005031765 ENSDLAG00005017202 ENSDLAG00005033245 ENSDLAG00005032354 ENSDLAG00005034093 ENSDLAG00005033229 fat3a (ENSDLAG00005017637) ENSDLAG00005029782 Large yellow croaker MODERN SPECIES 495 ENSLCRG00005015932 DCTN1 (ENSLCRG00005015935) ENSLCRG00005016007 ENSLCRG00005016009 tyro3 (ENSLCRG00005016013) ENSLCRG00005016143 ENSLCRG00005016150 ENSLCRG00005016156 ENSLCRG00005016162 ENSLCRG00005016164 ENSLCRG00005016166 ENSLCRG00005016167 lgals3b (ENSLCRG00005016168) fbxo34 (ENSLCRG00005016169) #24 jmjd7 (ENSLCRG00005016170) tbpl2 (ENSLCRG00005016177) #22 atg14 (ENSLCRG00005016181) #23 traf3 (ENSLCRG00005016184) ENSLCRG00005016192 rcor1 (ENSLCRG00005016195) ankrd9 (ENSLCRG00005016199) ENSLCRG00005016201 tecpr2 (ENSLCRG00005016206) ENSLCRG00005016254 cinp (ENSLCRG00005016256) dkc1 (ENSLCRG00005016262) dact1 (ENSLCRG00005016900) ENSLCRG00005016901 irf2bpl (ENSLCRG00005016902) ENSLCRG00005016903 arid4a (ENSLCRG00005016909) #8 Perciformes ANCESTRAL SPECIES 36 ENSGT00510000047092 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00940000155599.i.b ENSGT00940000155599.i.a.b ENSGT00390000004056 ENSGT00390000006205.b ENSGT00940000156572 Cottioidei ANCESTRAL SPECIES 66 ENSGT00390000006916.d.b ENSGT00550000074824 ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00950000183181.B.a ENSGT00940000157224.ab.c #26 ENSGT00940000165169.b.a ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00940000155599.i.b ENSGT00390000004056 ENSGT00390000006205.b ENSGT00940000156572 ENSGT00970000193421.B ENSGT00940000159386 ENSGT00550000074845 ENSGT00950000182865.b.a.a Lumpfish MODERN SPECIES 14 ENSCLMG00005015609 ENSCLMG00005015607 dkc1 (ENSCLMG00005015157) sec23a (ENSCLMG00005014923) srp54 (ENSCLMG00005014901) zgc:109986 (ENSCLMG00005014896) BAZ1A (ENSCLMG00005014892) cfl2 (ENSCLMG00005014876) snx6 (ENSCLMG00005013263) psma3 (ENSCLMG00005013255) #9 arid4a (ENSCLMG00005013253) #8 timm9 (ENSCLMG00005013250) #7 dact1 (ENSCLMG00005013247) ENSCLMG00005013244 #26 jmjd7 (ENSCLMG00005013241) tbpl2 (ENSCLMG00005013238) #22 atg14 (ENSCLMG00005013237) #23 ENSCLMG00005013235 ENSCLMG00005013233 tyro3 (ENSCLMG00005013163) lrrc57 (ENSCLMG00005013161) ENSCLMG00005013160 ENSCLMG00005012670 ENSCLMG00005012632 dhrs13a.2 (ENSCLMG00005012631) hikeshi (ENSCLMG00005012630) HEATR5A (ENSCLMG00005009093) ENSCLMG00005009068 ap4s1 (ENSCLMG00005009067) ENSCLMG00005009066 coch (ENSCLMG00005009065) Stickleback MODERN SPECIES 15 ENSGACG00000004306 srp54 (ENSGACG00000004181) sec23a (ENSGACG00000004177) zgc:109986 (ENSGACG00000004172) BAZ1A (ENSGACG00000004158) cfl2 (ENSGACG00000004148) snx6 (ENSGACG00000004071) psma3 (ENSGACG00000004038) #9 arid4a (ENSGACG00000004018) #8 timm9 (ENSGACG00000004009) #7 irf2bpl (ENSGACG00000004005) ENSGACG00000003999 lgals3b (ENSGACG00000003990) ENSGACG00000003988 jmjd7 (ENSGACG00000003975) tbpl2 (ENSGACG00000003968) #22 atg14 (ENSGACG00000003943) #23 ENSGACG00000003926 ENSGACG00000003923 ENSGACG00000003921 ENSGACG00000003916 tyro3 (ENSGACG00000003907) lrrc57 (ENSGACG00000003885) ENSGACG00000003883 hikeshi (ENSGACG00000003879) dhrs13a.2 (ENSGACG00000003868) Perciformes_a ANCESTRAL SPECIES 48 ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000165313 ENSGT00940000162596 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00390000013207 ENSGT00940000156646.d ENSGT00940000155369.A.d.a ENSGT00940000155599.i.b ENSGT00940000155599.i.a.b ENSGT00390000004056 ENSGT00390000006205.b ENSGT00940000156572 Channel bull blenny MODERN SPECIES 14 mbip (ENSCGOG00000023387) RPS6KA5 (ENSCGOG00000023253) hadhab (ENSCGOG00000022932) kif3cb (ENSCGOG00000022910) ENSCGOG00000022905 dtnbb (ENSCGOG00000022062) dnmt3ab (ENSCGOG00000021228) dpysl5a (ENSCGOG00000021008) mapre3a (ENSCGOG00000020998) OTOF (ENSCGOG00000020965) ENSCGOG00000020948 ENSCGOG00000020943 dact1 (ENSCGOG00000020934) lgals3b (ENSCGOG00000020931) jmjd7 (ENSCGOG00000020893) tbpl2 (ENSCGOG00000020891) #22 atg14 (ENSCGOG00000020885) #23 ENSCGOG00000020884 ENSCGOG00000020864 ENSCGOG00000020860 ENSCGOG00000020858 tyro3 (ENSCGOG00000020834) lrrc57 (ENSCGOG00000020832) slc3a2b (ENSCGOG00000020793) MDGA2 (ENSCGOG00000020243) dhrs13a.2 (ENSCGOG00000020222) dhrs13a.1 (ENSCGOG00000020129) hikeshi (ENSCGOG00000020116) HEATR5A (ENSCGOG00000018946) hectd1 (ENSCGOG00000018233) ap4s1 (ENSCGOG00000018201) Pike perch MODERN SPECIES 192 snx6 (ENSSLUG00000022496) psma3 (ENSSLUG00000022386) #9 ENSSLUG00000022369 #8 ENSSLUG00000022363 irf2bpl (ENSSLUG00000022316) dact1 (ENSSLUG00000022308) lgals3b (ENSSLUG00000022302) fbxo34 (ENSSLUG00000022291) #24 jmjd7 (ENSSLUG00000021935) tbpl2 (ENSSLUG00000021915) #22 atg14 (ENSSLUG00000021891) #23 ENSSLUG00000021878 ENSSLUG00000021820 ENSSLUG00000021809 ENSSLUG00000021801 ENSSLUG00000021780 tyro3 (ENSSLUG00000021735) lrrc57 (ENSSLUG00000021730) ENSSLUG00000021727 ENSSLUG00000021724 dhrs13a.1 (ENSSLUG00000021710) dhrs13a.2 (ENSSLUG00000021627) ENSSLUG00000021310 slc3a2b (ENSSLUG00000021227) hikeshi (ENSSLUG00000021212) Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 1093 dact1 (ENSLBEG00000019550) ENSLBEG00000019561 lgals3b (ENSLBEG00000019584) fbxo34 (ENSLBEG00000019593) #24 jmjd7 (ENSLBEG00000019616) ENSLBEG00000019649 tbpl2 (ENSLBEG00000019662) #22 Ballan wrasse MODERN SPECIES 582 fbxo34 (ENSLBEG00000024615) #24 jmjd7 (ENSLBEG00000024583) ENSLBEG00000024561 #22 atg14 (ENSLBEG00000024513) #23 ENSLBEG00000024465 ENSLBEG00000024444 ENSLBEG00000024407 tyro3 (ENSLBEG00000024362) lrrc57 (ENSLBEG00000024333) ENSLBEG00000024313 ENSLBEG00000024294 gjb9a (ENSLBEG00000024270) ENSLBEG00000024236 bsdc1 (ENSLBEG00000024206) olig4 (ENSLBEG00000024195) ENSLBEG00000024180 FNDC5 (ENSLBEG00000024162) Percomorphaceae_D ANCESTRAL SPECIES 10 ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00950000183519 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00940000161442 ENSGT00940000155999.f ENSGT00510000047092 ENSGT00530000069038.a.a Anabantaria ANCESTRAL SPECIES 10 ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00950000183519 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00510000047092 ENSGT00530000069038.a.a ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 Anabantoidei ANCESTRAL SPECIES 9 ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00390000012397 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00510000047092 ENSGT00530000069038.a.a ENSGT00390000015784 ENSGT00390000002751 ENSGT00940000157283 Climbing perch DUPLICATION Climbing perch MODERN SPECIES 13 BAZ1A (ENSATEG00000014536) ENSATEG00000028863 cfl2 (ENSATEG00000028424) snx6 (ENSATEG00000014485) psma3 (ENSATEG00000014448) #9 arid4a (ENSATEG00000014386) #8 timm9 (ENSATEG00000014424) #7 irf2bpl (ENSATEG00000025496) dact1 (ENSATEG00000029802) lgals3b (ENSATEG00000025771) fbxo34 (ENSATEG00000026495) #24 jmjd7 (ENSATEG00000014314) ENSATEG00000028601 #22 atg14 (ENSATEG00000014255) #23 ENSATEG00000014240 ENSATEG00000027357 #22 ENSATEG00000014152 #23 ENSATEG00000029988 ENSATEG00000014033 ENSATEG00000014000 tyro3 (ENSATEG00000013957) ENSATEG00000013936 ENSATEG00000013925 ENSATEG00000013877 ENSATEG00000013805 ENSATEG00000013787 ENSATEG00000013682 ENSATEG00000013604 ENSATEG00000029525 tecpr2 (ENSATEG00000013546) ankrd9 (ENSATEG00000013569) Climbing perch MODERN SPECIES 13 ENSATEG00000014580 ENSATEG00000014569 zgc:109986 (ENSATEG00000014565) BAZ1A (ENSATEG00000014536) ENSATEG00000028863 cfl2 (ENSATEG00000028424) snx6 (ENSATEG00000014485) psma3 (ENSATEG00000014448) #9 arid4a (ENSATEG00000014386) #8 timm9 (ENSATEG00000014424) #7 irf2bpl (ENSATEG00000025496) dact1 (ENSATEG00000029802) lgals3b (ENSATEG00000025771) fbxo34 (ENSATEG00000026495) #24 jmjd7 (ENSATEG00000014314) ENSATEG00000028601 #22 atg14 (ENSATEG00000014255) #23 ENSATEG00000014240 ENSATEG00000027357 #22 ENSATEG00000014152 #23 ENSATEG00000029988 ENSATEG00000014033 ENSATEG00000014000 tyro3 (ENSATEG00000013957) ENSATEG00000013936 ENSATEG00000013925 ENSATEG00000013877 ENSATEG00000013805 ENSATEG00000013787 ENSATEG00000013682 ENSATEG00000013604 Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 12 BAZ1A (ENSBSLG00000010664) cfl2 (ENSBSLG00000010594) snx6 (ENSBSLG00000009550) psma3 (ENSBSLG00000009358) #9 arid4a (ENSBSLG00000009126) #8 timm9 (ENSBSLG00000009099) #7 ENSBSLG00000009094 ENSBSLG00000008973 dact1 (ENSBSLG00000008942) lgals3b (ENSBSLG00000008918) fbxo34 (ENSBSLG00000008704) #24 tbpl2 (ENSBSLG00000008680) #22 atg14 (ENSBSLG00000008664) #23 ENSBSLG00000008622 jmjd7 (ENSBSLG00000008449) tbpl2 (ENSBSLG00000008412) #22 atg14 (ENSBSLG00000008373) #23 ENSBSLG00000008307 ENSBSLG00000008247 ENSBSLG00000008215 ENSBSLG00000008205 tyro3 (ENSBSLG00000007942) lrrc57 (ENSBSLG00000007901) haus2 (ENSBSLG00000007845) srp54 (ENSBSLG00000007749) sec23a (ENSBSLG00000007411) ENSBSLG00000007399 dkc1 (ENSBSLG00000006764) ENSBSLG00000006464 cinp (ENSBSLG00000006356) ENSBSLG00000005914 Siamese fighting fish MODERN SPECIES 12 slc3a2b (ENSBSLG00000011462) ENSBSLG00000011458 ENSBSLG00000010948 zgc:109986 (ENSBSLG00000010904) BAZ1A (ENSBSLG00000010664) cfl2 (ENSBSLG00000010594) snx6 (ENSBSLG00000009550) psma3 (ENSBSLG00000009358) #9 arid4a (ENSBSLG00000009126) #8 timm9 (ENSBSLG00000009099) #7 ENSBSLG00000009094 ENSBSLG00000008973 dact1 (ENSBSLG00000008942) lgals3b (ENSBSLG00000008918) fbxo34 (ENSBSLG00000008704) #24 tbpl2 (ENSBSLG00000008680) #22 atg14 (ENSBSLG00000008664) #23 ENSBSLG00000008622 jmjd7 (ENSBSLG00000008449) tbpl2 (ENSBSLG00000008412) #22 atg14 (ENSBSLG00000008373) #23 ENSBSLG00000008307 ENSBSLG00000008247 ENSBSLG00000008215 ENSBSLG00000008205 tyro3 (ENSBSLG00000007942) lrrc57 (ENSBSLG00000007901) haus2 (ENSBSLG00000007845) srp54 (ENSBSLG00000007749) sec23a (ENSBSLG00000007411) ENSBSLG00000007399 Zig-zag eel MODERN SPECIES 50 ENSMAMG00000007009 ENSMAMG00000007004 ENSMAMG00000025765 zgc:109986 (ENSMAMG00000006979) BAZ1A (ENSMAMG00000006945) cfl2 (ENSMAMG00000006926) snx6 (ENSMAMG00000006844) psma3 (ENSMAMG00000025722) #9 arid4a (ENSMAMG00000006769) #8 ENSMAMG00000006749 si:ch211-185a18.2 (ENSMAMG00000006578) dact1 (ENSMAMG00000006571) lgals3b (ENSMAMG00000006554) fbxo34 (ENSMAMG00000006547) #24 jmjd7 (ENSMAMG00000006499) ENSMAMG00000005937 #22 atg14 (ENSMAMG00000005886) #23 ENSMAMG00000005859 ENSMAMG00000024748 ENSMAMG00000005499 ENSMAMG00000005466 ENSMAMG00000005448 ENSMAMG00000005427 ENSMAMG00000027822 ENSMAMG00000005406 ENSMAMG00000005394 ankrd9 (ENSMAMG00000005333) ENSMAMG00000005291 traf3 (ENSMAMG00000005028) ENSMAMG00000005011 ENSMAMG00000004975 Carangaria ANCESTRAL SPECIES 10 ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00940000161442 ENSGT00940000155999.f ENSGT00510000047092 ENSGT00530000069038.a.a Pleuronectoidei ANCESTRAL SPECIES 5 ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799 ENSGT00940000166431 ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912 #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00940000177904 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00940000161442 ENSGT00510000047092 ENSGT00530000069038.a.a ENSGT00390000015784 Turbot MODERN SPECIES 8 ehd4 (ENSSMAG00000002935) ENSSMAG00000002958 zgc:109986 (ENSSMAG00000012609) BAZ1A (ENSSMAG00000012566) cfl2 (ENSSMAG00000012418) snx6 (ENSSMAG00000012367) ENSSMAG00000030491 psma3 (ENSSMAG00000012319) #9 arid4a (ENSSMAG00000012268) #8 timm9 (ENSSMAG00000035879) #7 irf2bpl (ENSSMAG00000012255) dact1 (ENSSMAG00000033904) lgals3b (ENSSMAG00000002149) fbxo34 (ENSSMAG00000002152) #24 jmjd7 (ENSSMAG00000002155) ENSSMAG00000002190 #22 atg14 (ENSSMAG00000032144) #23 ENSSMAG00000002211 ENSSMAG00000002219 ENSSMAG00000002227 tyro3 (ENSSMAG00000002269) ENSSMAG00000002401 ENSSMAG00000002431 SRP54 (ENSSMAG00000002441) ENSSMAG00000002497 ENSSMAG00000021449 ENSSMAG00000002537 ENSSMAG00000002552 ENSSMAG00000002649 ENSSMAG00000002618 ENSSMAG00000002661 Tongue sole MODERN SPECIES ENSCSEG00000011841 ENSCSEG00000011854 cfl2 (ENSCSEG00000011860) snx6 (ENSCSEG00000011868) psma3 (ENSCSEG00000011909) #9 arid4a (ENSCSEG00000011930) #8 ENSCSEG00000011975 lrrc57 (ENSCSEG00000011983) tyro3 (ENSCSEG00000012013) ENSCSEG00000012077 ENSCSEG00000012157 ENSCSEG00000012167 irf2bpl (ENSCSEG00000012173) ENSCSEG00000012176 lgals3b (ENSCSEG00000012178) tbpl2 (ENSCSEG00000012205) #22 jmjd7 (ENSCSEG00000012358) atg14 (ENSCSEG00000012369) #23 ENSCSEG00000012379 srp54 (ENSCSEG00000012392) sec23a (ENSCSEG00000012432) ENSCSEG00000012464 ENSCSEG00000012467 ENSCSEG00000012471 mipol1 (ENSCSEG00000012492) C5orf63 (ENSCSEG00000012521) traf3 (ENSCSEG00000012530) ankrd9 (ENSCSEG00000012553) tecpr2 (ENSCSEG00000012558) ENSCSEG00000012591 ENSCSEG00000012614 Carangaria_A ANCESTRAL SPECIES 72 ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799.g ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912.kb #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT01030000234930 ENSGT00940000161442 ENSGT00940000155999.f ENSGT00940000162043 ENSGT00390000017800 Seriola ANCESTRAL SPECIES 46 ENSGT00940000155369.A.d.a ENSGT00940000156646.d ENSGT00390000012799.g ENSGT00940000158135 ENSGT00950000183000.c.b ENSGT00940000154940 ENSGT00550000074912.kb #9 ENSGT00940000156159 #8 ENSGT00940000160102 #7 ENSGT00940000162596 ENSGT00950000183181.B.a ENSGT00940000165169.b.a ENSGT00530000064222.b #24 ENSGT00900000141196 ENSGT00940000159561.m #22 ENSGT00390000011854 #23 ENSGT00940000182030 ENSGT00940000163520.A.a.a.a.a.a.a.g.b ENSGT00940000164564.f.a ENSGT00940000156269.a.a ENSGT00940000155879 ENSGT00940000157393 ENSGT00390000004927 ENSGT00550000074824 ENSGT00940000166602.A ENSGT00390000006916.d.b ENSGT00940000154629.B ENSGT00940000175695 ENSGT00390000006370 ENSGT00390000007200 Greater amberjack MODERN SPECIES 194 trim35-31 (ENSSDUG00000000797) zgc:109986 (ENSSDUG00000000778) BAZ1A (ENSSDUG00000000605) cfl2 (ENSSDUG00000000590) ENSSDUG00000000573 ENSSDUG00000000528 snx6 (ENSSDUG00000000471) psma3 (ENSSDUG00000000428) #9 arid4a (ENSSDUG00000000343) #8 timm9 (ENSSDUG00000000321) #7 irf2bpl (ENSSDUG00000000251) dact1 (ENSSDUG00000000149) lgals3b (ENSSDUG00000000136) fbxo34 (ENSSDUG00000000126) #24 jmjd7 (ENSSDUG00000019085) tbpl2 (ENSSDUG00000019063) #22 atg14 (ENSSDUG00000019014) #23 ENSSDUG00000018999 ENSSDUG00000018987 ENSSDUG00000018918 ENSSDUG00000018907 tyro3 (ENSSDUG00000018685) lrrc57 (ENSSDUG00000018666) ENSSDUG00000018616 srp54 (ENSSDUG00000018586) ENSSDUG00000018576 sec23a (ENSSDUG00000018503) chp1 (ENSSDUG00000018461) ENSSDUG00000018451 nusap1 (ENSSDUG00000018431) ndufaf1 (ENSSDUG00000018421) Yellowtail amberjack MODERN SPECIES 3190 dact1 (ENSSLDG00000010863) ENSSLDG00000010830 fbxo34 (ENSSLDG00000010801) #24 jmjd7 (ENSSLDG00000010772) tbpl2 (ENSSLDG00000010726) #22 atg14 (ENSSLDG00000010691) #23 ENSSLDG00000010669 ENSSLDG00000010653 ENSSLDG00000010635 ENSSLDG00000010618 tyro3 (ENSSLDG00000010591) lrrc57 (ENSSLDG00000010567) haus2 (ENSSLDG00000010545) srp54 (ENSSLDG00000010476) ENSSLDG00000010456 sec23a (ENSSLDG00000010387) chp1 (ENSSLDG00000010344) ENSSLDG00000010296 nusap1 (ENSSLDG00000010260) golga5 (ENSSLDG00000010216) Barramundi perch MODERN SPECIES 57 ENSLCAG00010027660 CFL2 (ENSLCAG00010027659) snx6 (ENSLCAG00010027652) psma3 (ENSLCAG00010027630) #9 arid4a (ENSLCAG00010027607) #8 ENSLCAG00010027604 irf2bpl (ENSLCAG00010027602) dact1 (ENSLCAG00010027599) jmjd7 (ENSLCAG00010027590) tbpl2 (ENSLCAG00010027586) #22 atg14 (ENSLCAG00010027583) #23 lrrc57 (ENSLCAG00010027581) ATP1B2 (ENSLCAG00010027579) ENSLCAG00010027576 ENSLCAG00010027571 MEPCE (ENSLCAG00010027564) Percomorphaceae ANCESTRAL SPECIES ENSGT00940000159561.n #22 Tiger tail seahorse MODERN SPECIES 235 ppa1a (ENSHCOG00000001173) lrrc20 (ENSHCOG00000001166) ndr2 (ENSHCOG00000001164) pald1a (ENSHCOG00000001153) ADAMTS14 (ENSHCOG00000001114) TBATA (ENSHCOG00000001087) QRFPR (ENSHCOG00000001082) polr3a (ENSHCOG00000001075) ppifb (ENSHCOG00000000047) ZMIZ1 (ENSHCOG00000021018) ENSHCOG00000000567 cox11 (ENSHCOG00000019584) ENSHCOG00000019553 nog3 (ENSHCOG00000019547) ENSHCOG00000019534 ENSHCOG00000019510 #22 TMEM100 (ENSHCOG00000019494) HLF (ENSHCOG00000019483) STXBP4 (ENSHCOG00000019446) OXER1 (ENSHCOG00000019334) ENSHCOG00000019305 ENSHCOG00000019272 GRID1 (ENSHCOG00000019247) ENSHCOG00000019188 WAPL (ENSHCOG00000019172) ENSHCOG00000019165 ENSHCOG00000019137 ENSHCOG00000019114 ENSHCOG00000019061 asb3 (ENSHCOG00000019052) abca5 (ENSHCOG00000019034) Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000159561.n #22 Ovalentaria ANCESTRAL SPECIES ENSGT00940000159561.n #22 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000159561.n #22 Oryzias ANCESTRAL SPECIES ENSGT00940000159561.n #22 Oryzias_a ANCESTRAL SPECIES ENSGT00940000159561.n #22 Chinese medaka MODERN SPECIES 4155 ENSOSIG00000013520 #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000159561.n #22 Pomacentridae ANCESTRAL SPECIES 60 ENSGT00940000154704.d.a ENSGT00940000158678 ENSGT00940000163299.B.b.b.h.c.b ENSGT00390000014563.a.a.a ENSGT00940000155830.e.a ENSGT00390000015845 ENSGT00950000183195.b.b ENSGT00940000166406 ENSGT00940000161207 ENSGT00510000046773.a.b.c.a.o ENSGT00390000007512 ENSGT00940000158816.d ENSGT00390000006009.a.a.a.d ENSGT00940000163071 ENSGT00940000159856 ENSGT00940000159561.n #22 ENSGT00940000154322.A.b.b ENSGT00980000198588 ENSGT00940000156555.i.a ENSGT00390000002226 ENSGT00990000203619.A.b.b.b.a.f ENSGT00390000014380.h.b.b.i.b.a.a.a ENSGT00940000159911 ENSGT00960000187086 ENSGT00940000157037.b.b.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00530000064550.B ENSGT00390000014380.h.b.b.i.b.a.a.b ENSGT00940000160064.a.a ENSGT00390000015768.i.b Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 1085 ENSSPAG00000004857 ahcy (ENSSPAG00000004866) CHMP4B (ENSSPAG00000004905) ENSSPAG00000004920 ENSSPAG00000004983 ENSSPAG00000005702 #22 pck1 (ENSSPAG00000005719) PMEPA1 (ENSSPAG00000005754) ENSSPAG00000005784 ccndbp1 (ENSSPAG00000005809) ENSSPAG00000005845 ENSSPAG00000005856 ENSSPAG00000005869 tomm34 (ENSSPAG00000005876) Bicolor damselfish MODERN SPECIES 1020 ENSSPAG00000022783 si:busm1-57f23.1 (ENSSPAG00000022793) rassf6 (ENSSPAG00000022801) MUSK (ENSSPAG00000022812) lpar1 (ENSSPAG00000022822) ENSSPAG00000022828 ENSSPAG00000022840 ENSSPAG00000022845 ENSSPAG00000022855 ENSSPAG00000022858 ENSSPAG00000022870 ENSSPAG00000022878 ENSSPAG00000022879 #22 TMEM100 (ENSSPAG00000022880) SMIM36 (ENSSPAG00000022881) Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000159561.n #22 Amphiprion ANCESTRAL SPECIES ENSGT00940000159561.n #22 Orange clownfish MODERN SPECIES 15 supt16h (ENSAPEG00000017067) tox4b (ENSAPEG00000017039) SLC12A6 (ENSAPEG00000016957) nop10 (ENSAPEG00000016945) lpcat4 (ENSAPEG00000016871) ENSAPEG00000016854 emc4 (ENSAPEG00000016828) ENSAPEG00000016737 ENSAPEG00000016663 ENSAPEG00000016644 ENSAPEG00000016608 ENSAPEG00000016581 ENSAPEG00000016548 ENSAPEG00000016471 ENSAPEG00000016444 ENSAPEG00000016425 #22 ENSAPEG00000016410 ENSAPEG00000016394 ENSAPEG00000016231 ENSAPEG00000016211 vbp1 (ENSAPEG00000016200) RAB39B (ENSAPEG00000016172) zgc:162171 (ENSAPEG00000016151) ENSAPEG00000016052 zgc:92429 (ENSAPEG00000015973) ENSAPEG00000015925 ENSAPEG00000015898 ENSAPEG00000015776 ENSAPEG00000015741 zgc:109889 (ENSAPEG00000015644) htr2cl1 (ENSAPEG00000015608) Clown anemonefish MODERN SPECIES 2864 ENSAOCG00000001974 #22 ENSAOCG00000014315 ENSAOCG00000014337 ENSAOCG00000014348 Spiny chromis MODERN SPECIES 2285 ENSAPOG00000020568 #22 commd1 (ENSAPOG00000020630) Cichlidae ANCESTRAL SPECIES ENSGT00940000159561.n #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000159561.n #22 Nile tilapia MODERN SPECIES 20 ENSONIG00000019102 ENSONIG00000041734 ENSONIG00000041272 ENSONIG00000019101 heatr1 (ENSONIG00000019095) arg1 (ENSONIG00000019093) p4ha1a (ENSONIG00000019090) rab40b (ENSONIG00000042733) ENSONIG00000042046 ENSONIG00000027895 cox11 (ENSONIG00000037531) ENSONIG00000011028 CBX2 (ENSONIG00000019084) nog3 (ENSONIG00000040505) ENSONIG00000019082 ENSONIG00000019081 #22 TMEM100 (ENSONIG00000021184) HLF (ENSONIG00000039801) STXBP4 (ENSONIG00000019077) OXER1 (ENSONIG00000019076) ENSONIG00000041818 ENSONIG00000043051 ENSONIG00000035875 MFAP4 (ENSONIG00000019075) MFAP4 (ENSONIG00000006632) ENSONIG00000019072 ENSONIG00000035710 ENSONIG00000029915 ENSONIG00000032716 ENSONIG00000035534 ENSONIG00000019070 Percomorphaceae_C ANCESTRAL SPECIES 14 ENSGT00940000158678 ENSGT00390000014563.a.a.a ENSGT00990000204173 ENSGT00940000163299.B.b.b.h.c.b ENSGT00940000155830.e.a ENSGT00390000015845 ENSGT00950000183195.b.b ENSGT00940000166406 ENSGT00940000161207 ENSGT00390000007512 ENSGT00940000158816.d ENSGT00390000006009.a.a.a.c.a ENSGT00940000163071 ENSGT00940000159856 ENSGT00940000167740 ENSGT00940000159561.n #22 ENSGT00940000154322.A.b.b ENSGT00980000198588 ENSGT00940000156555.i.a ENSGT00390000002226 ENSGT00990000203619.A.b.b.b.a.f ENSGT00940000159911 ENSGT00960000187086 ENSGT00940000157037.b.b.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00530000064550.B ENSGT00390000014380.h.b.b.i.b.a.a.b ENSGT00940000160064.a.a ENSGT00390000015768.i.b ENSGT00970000193381.a.b.a.a.b.b.a Percomorphaceae_D ANCESTRAL SPECIES 13 ENSGT00950000183033.a.a.c.b.m.b ENSGT00940000154704.d.a ENSGT00940000158678 ENSGT00390000014563.a.a.a ENSGT00940000163299.B.b.b.h.c.b ENSGT00940000155830.e.a ENSGT00390000015845 ENSGT00950000183195.b.b ENSGT00940000166406 ENSGT00940000161207 ENSGT00390000007512 ENSGT00940000158816.d ENSGT00390000006009.a.a.a.c.a ENSGT00940000163071 ENSGT00940000159856 ENSGT00940000159561.n #22 ENSGT00940000154322.A.b.b ENSGT00980000198588 ENSGT00940000156555.i.a ENSGT00390000002226 ENSGT00990000203619.A.b.b.b.a.f ENSGT00940000159911 ENSGT00940000157037.b.b.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00530000064550.B ENSGT00390000014380.h.b.b.i.b.b ENSGT00940000160064.a.a ENSGT00390000015768.i.b ENSGT00970000193381.a.b.a.a.b.b.a ENSGT00940000155157.b Carangaria ANCESTRAL SPECIES 13 ENSGT00950000183033.a.a.c.b.m.b ENSGT00940000154704.d.a ENSGT00940000158678 ENSGT00390000014563.a.a.a ENSGT00940000163299.B.b.b.h.c.b ENSGT00940000155830.e.a ENSGT00390000015845 ENSGT00950000183195.b.b ENSGT00940000166406 ENSGT00940000161207 ENSGT00390000007512 ENSGT00940000158816.d ENSGT00390000006009.a.a.a.c.a ENSGT00940000163071 ENSGT00940000159856 ENSGT00940000159561.n #22 ENSGT00940000154322.A.b.b ENSGT00980000198588 ENSGT00940000156555.i.a ENSGT00390000002226 ENSGT00990000203619.A.b.b.b.a.f ENSGT00940000159911 ENSGT00940000157037.b.b.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00530000064550.B ENSGT00390000014380.h.b.b.i.b.b ENSGT00940000160064.a.a ENSGT00390000015768.i.b ENSGT00940000155157.b ENSGT00940000156955.a.b Pleuronectoidei ANCESTRAL SPECIES ENSGT00940000159561.n #22 Turbot MODERN SPECIES 9 ENSSMAG00000011448 ENSSMAG00000011463 ENSSMAG00000011480 nploc4 (ENSSMAG00000011592) ENSSMAG00000011668 ENSSMAG00000024570 ENSSMAG00000011688 cep131 (ENSSMAG00000011717) ENSSMAG00000011858 ENSSMAG00000011875 AATK (ENSSMAG00000011887) BAIAP2 (ENSSMAG00000011930) CHMP6 (ENSSMAG00000011962) ENSSMAG00000011979 ENSSMAG00000012211 ENSSMAG00000012256 #22 C10orf88 (ENSSMAG00000012285) htra1b (ENSSMAG00000012293) PLEKHA1 (ENSSMAG00000036866) WAPL (ENSSMAG00000012352) ENSSMAG00000012380 ENSSMAG00000012871 ENSSMAG00000012962 ENSSMAG00000012997 ENSSMAG00000013021 STXBP4 (ENSSMAG00000013033) ENSSMAG00000024875 TMEM100 (ENSSMAG00000013082) ANKFN1 (ENSSMAG00000013087) nog3 (ENSSMAG00000013113) ENSSMAG00000033997 Carangaria_A ANCESTRAL SPECIES 5 ENSGT00940000166406 ENSGT00940000161207 ENSGT00390000007512 ENSGT00940000158816.d ENSGT00390000006009.a.a.a.c.a ENSGT00940000159856 ENSGT00940000159561.n #22 ENSGT00940000154322.A.b.b ENSGT00980000198588 ENSGT00940000156555.i.a ENSGT00390000002226 ENSGT00990000203619.A.b.b.b.a.f ENSGT00940000159911 ENSGT00940000157037.b.b.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00530000064550.B ENSGT00390000014380.h.b.b.i.b.b ENSGT00390000014380.h.b.b.i.b.a.a.b ENSGT00940000160064.a.a ENSGT00390000015768.i.b ENSGT00940000155157.b Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 521 ENSLCAG00010016633 #22 MFAP4 (ENSLCAG00010016616) TMEM100 (ENSLCAG00010016603) HLF (ENSLCAG00010016600) ENSLCAG00010016594 OXER1 (ENSLCAG00010016590) Barramundi perch MODERN SPECIES 950 ENSLCAG00010006700 #22 MFAP4 (ENSLCAG00010006674) TMEM100 (ENSLCAG00010006657) Seriola ANCESTRAL SPECIES 1 ENSGT00940000153536.a.b.b.a.a ENSGT00940000158181.b ENSGT00940000153251.b.b ENSGT00940000157276.d ENSGT00390000006705 ENSGT00950000183187.B ENSGT00940000160906 ENSGT00950000182906.a.a.b ENSGT00930000151032.B ENSGT00940000166406 ENSGT00940000161207 ENSGT00390000007512 ENSGT00940000158816.d ENSGT00390000006009.a.a.a.c.a ENSGT00940000159856 ENSGT00940000159561.n #22 ENSGT00940000154322.A.b.b ENSGT00980000198588 ENSGT00940000156555.i.a ENSGT00390000002226 ENSGT00990000203619.A.b.b.b.a.f ENSGT00940000159911 ENSGT00940000157037.b.b.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00530000064550.B ENSGT00390000014380.h.b.b.i.b.b ENSGT00390000014380.h.b.b.i.b.a.a.b ENSGT00940000160064.a.a ENSGT00390000015768.i.b ENSGT00940000155157.b Greater amberjack MODERN SPECIES 193 ENSSDUG00000015697 ENSSDUG00000015685 ccdc57 (ENSSDUG00000015628) rab3gap1 (ENSSDUG00000015584) galk1 (ENSSDUG00000015555) KCTD21 (ENSSDUG00000015546) llgl2 (ENSSDUG00000015487) ENSSDUG00000015449 ENSSDUG00000015356 rab40b (ENSSDUG00000015335) ENSSDUG00000015317 cox11 (ENSSDUG00000015297) CBX2 (ENSSDUG00000015282) nog3 (ENSSDUG00000015275) ANKFN1 (ENSSDUG00000015152) ENSSDUG00000015129 #22 TMEM100 (ENSSDUG00000015120) SMIM36 (ENSSDUG00000015115) HLF (ENSSDUG00000015107) STXBP4 (ENSSDUG00000015062) OXER1 (ENSSDUG00000015052) TNKS2 (ENSSDUG00000014995) ENSSDUG00000014973 ENSSDUG00000014900 Yellowtail amberjack MODERN SPECIES 2977 CSNK1D (ENSSLDG00000016364) slc16a3b (ENSSLDG00000016379) ENSSLDG00000016414 ccdc57 (ENSSLDG00000016455) rab3gap1 (ENSSLDG00000016542) galk1 (ENSSLDG00000016584) KCTD21 (ENSSLDG00000016613) llgl2 (ENSSLDG00000016632) ENSSLDG00000016708 ENSSLDG00000016815 rab40b (ENSSLDG00000016845) cox11 (ENSSLDG00000016865) CBX2 (ENSSLDG00000016888) nog3 (ENSSLDG00000016904) ENSSLDG00000016916 ENSSLDG00000016935 #22 TMEM100 (ENSSLDG00000016957) SMIM36 (ENSSLDG00000016965) HLF (ENSSLDG00000016973) ENSSLDG00000016985 OXER1 (ENSSLDG00000017000) TNKS2 (ENSSLDG00000017021) ENSSLDG00000017070 ENSSLDG00000017089 GRID1 (ENSSLDG00000017104) ENSSLDG00000017139 ENSSLDG00000017439 ENSSLDG00000019110 ENSSLDG00000019774 WAPL (ENSSLDG00000019784) ENSSLDG00000019828 Anabantaria ANCESTRAL SPECIES 31 ENSGT00390000015792 ENSGT00950000183033.a.a.c.b.m.b ENSGT00940000154704.d.a ENSGT00940000158678 ENSGT00390000014563.a.a.a ENSGT00940000163299.B.b.b.h.c.b ENSGT00940000155830.e.a ENSGT00390000015845 ENSGT00950000183195.b.b ENSGT00940000166406 ENSGT00940000161207 ENSGT00390000007512 ENSGT00940000158816.d ENSGT00390000006009.a.a.a.c.a ENSGT00940000159856 ENSGT00940000159561.n #22 ENSGT00940000154322.A.b.b ENSGT00940000156555.i.a ENSGT00390000002226 ENSGT00990000203619.A.b.b.b.a.f ENSGT00940000159911 ENSGT00940000157037.b.b.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00940000160064.a.a ENSGT00390000015768.i.b ENSGT00970000193381.a.b.a.a.b.b.a ENSGT00940000155157.b ENSGT00940000156955.a.b ENSGT00390000017384 ENSGT00940000159080 Anabantoidei ANCESTRAL SPECIES 10 ENSGT00390000015792 ENSGT00950000183033.a.a.c.b.m.b ENSGT00940000154704.d.a ENSGT00940000158678 ENSGT00390000014563.a.a.a ENSGT00940000163299.B.b.b.h.c.b ENSGT00940000155830.e.a ENSGT00390000015845 ENSGT00950000183195.b.b ENSGT00940000166406 ENSGT00940000161207 ENSGT00390000007512 ENSGT00940000158816.d ENSGT00390000006009.a.a.a.c.a ENSGT00940000159856 ENSGT00940000159561.n #22 ENSGT00940000154322.A.b.b ENSGT00940000156555.i.a ENSGT00390000002226 ENSGT00990000203619.A.b.b.b.a.f ENSGT00940000157037.b.b.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00390000014380.h.b.b.i.b.a.b ENSGT00940000160064.a.a ENSGT00390000015768.i.b ENSGT00970000193381.a.b.a.a.b.b.a ENSGT00940000155157.b ENSGT00940000156955.a.b ENSGT00390000017384 ENSGT00940000159080 Climbing perch MODERN SPECIES 10 ENSATEG00000029910 ENSATEG00000013677 ENSATEG00000026709 ENSATEG00000013555 ENSATEG00000013612 ENSATEG00000013534 ENSATEG00000013517 heatr1 (ENSATEG00000013260) ENSATEG00000028454 p4ha1a (ENSATEG00000013191) ENSATEG00000013159 ENSATEG00000013113 ENSATEG00000013100 nog3 (ENSATEG00000013088) ANKFN1 (ENSATEG00000013041) ENSATEG00000012983 #22 TMEM100 (ENSATEG00000012976) ENSATEG00000012942 STXBP4 (ENSATEG00000012636) ENSATEG00000012605 ENSATEG00000012597 ENSATEG00000012581 ENSATEG00000012554 ENSATEG00000012490 ENSATEG00000012304 ENSATEG00000012257 WAPL (ENSATEG00000012181) ENSATEG00000029045 PLEKHA1 (ENSATEG00000012101) htra1b (ENSATEG00000012049) ENSATEG00000012031 Zig-zag eel MODERN SPECIES 10 ENSMAMG00000010556 ENSMAMG00000010302 ENSMAMG00000010271 ENSMAMG00000024942 ENSMAMG00000027406 ENSMAMG00000027428 heatr1 (ENSMAMG00000010181) ENSMAMG00000010167 p4ha1a (ENSMAMG00000010119) ENSMAMG00000010096 ENSMAMG00000010086 ENSMAMG00000010075 ENSMAMG00000010068 nog3 (ENSMAMG00000010066) ANKFN1 (ENSMAMG00000009993) ENSMAMG00000009953 #22 TMEM100 (ENSMAMG00000009947) ENSMAMG00000024890 STXBP4 (ENSMAMG00000009894) ENSMAMG00000009885 ENSMAMG00000025797 ENSMAMG00000009801 ENSMAMG00000009783 ENSMAMG00000009753 ENSMAMG00000009721 ENSMAMG00000009697 WAPL (ENSMAMG00000009582) ENSMAMG00000009571 PLEKHA1 (ENSMAMG00000009539) htra1b (ENSMAMG00000009510) ENSMAMG00000009495 Eupercaria ANCESTRAL SPECIES 10 ENSGT00390000015792 ENSGT00950000183033.a.a.c.b ENSGT00940000154704.d.a ENSGT00940000158678 ENSGT00390000014563.a.a.a ENSGT00940000155830.e.a ENSGT00390000015845 ENSGT00950000183195.b.b ENSGT00940000166406 ENSGT00940000161207 ENSGT00390000007512 ENSGT00940000158816.d ENSGT00390000006009.a.a.a.c.a ENSGT00940000159856 ENSGT00940000167740 ENSGT00940000159561.n #22 ENSGT00940000154322.A.b.b ENSGT00940000156555.i.a ENSGT00390000002226 ENSGT00990000203619.A.b.b.b.a.f ENSGT00940000159911 ENSGT00960000187086 ENSGT00940000157037.b.b.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00530000064550.B ENSGT00390000014380.h.b.b.i.b.a.a.b ENSGT00940000160064.a.a ENSGT00390000015768.i.b ENSGT00970000193381.a.b.a.a.b.b.a ENSGT00940000155157.b Eupecaria_A ANCESTRAL SPECIES 22 ENSGT00390000015792 ENSGT00950000183033.a.a.c.b ENSGT00940000154704.d.a ENSGT00940000158678 ENSGT00390000014563.a.a.a ENSGT00940000155830.e.a ENSGT00390000015845 ENSGT00950000183195.b.b ENSGT00940000166406 ENSGT00940000161207.j ENSGT00390000007512 ENSGT00940000158816.d ENSGT00390000006009.a.a.a.c.a ENSGT00940000159856 ENSGT00940000167740 ENSGT00940000159561.n #22 ENSGT00940000154322.A.b.b ENSGT00940000156555.i.a ENSGT00390000002226 ENSGT00990000203619.A.b.b.b.a.f ENSGT00940000159911 ENSGT00960000187086 ENSGT00940000157037.b.b.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00530000064550.B ENSGT00390000014380.h.b.b.i.b.a.a.b ENSGT00940000160064.a.a ENSGT00390000015768.i.b ENSGT00970000193381.a.b.a.a.b.b.a ENSGT00940000155157.b Eupecaria_B ANCESTRAL SPECIES 22 ENSGT00950000183033.a.a.c.b ENSGT00940000154704.d.a ENSGT00940000158678 ENSGT00390000014563.a.a.a ENSGT00940000155830.e.a ENSGT00390000015845 ENSGT00950000183195.b.b ENSGT00940000154615.i.a.a.d ENSGT00940000166406 ENSGT00940000161207.j ENSGT00390000007512 ENSGT00940000158816.d ENSGT00390000006009.a.a.a.c.a ENSGT00940000159856 ENSGT00940000167740 ENSGT00940000159561.n #22 ENSGT00940000154322.A.b.b ENSGT00940000156555.i.a ENSGT00390000002226 ENSGT00990000203619.A.b.b.b.a.f ENSGT00940000159911 ENSGT00960000187086 ENSGT00940000157037.b.b.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00530000064550.B ENSGT00390000014380.h.b.b.i.b.a.a.b ENSGT00940000160064.a.a ENSGT00390000015768.i.b ENSGT00970000193381.a.b.a.a.b.b.a ENSGT00940000155157.b Eupecaria_C ANCESTRAL SPECIES 23 ENSGT00940000155830.e.a ENSGT00390000015845 ENSGT00950000183195.b.b ENSGT00940000154615.i.a.a.d ENSGT00940000166406 ENSGT00940000161207.j ENSGT00390000007512 ENSGT00940000158816.d ENSGT00390000006009.a.a.a.c.a ENSGT00940000159856 ENSGT00940000167740 ENSGT00940000159561.n #22 ENSGT00940000154322.A.b.b ENSGT00940000156555.i.a ENSGT00390000002226 ENSGT00990000203619.A.b.b.b.a.f ENSGT00940000159911 ENSGT00960000187086 ENSGT00940000157037.b.b.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00530000064550.B ENSGT00390000014380.h.b.b.i.b.a.a.b ENSGT00940000160064.a.a ENSGT00390000015768.i.b ENSGT00970000193381.a.b.a.a.b.b.a ENSGT00940000155157.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 27 ENSGT00940000155830.e.a ENSGT00390000015845 ENSGT00950000183195.b.b ENSGT00940000154615.i.a.a.d ENSGT00940000166406 ENSGT00940000161207.j ENSGT00390000007512 ENSGT00940000158816.d ENSGT00390000006009.a.a.a.c.a ENSGT00940000159856 ENSGT00940000159561.n #22 ENSGT00940000154322.A.b.b ENSGT00940000156555.i.a ENSGT00390000002226 ENSGT00990000203619.A.b.b.b.a.f ENSGT00940000159911 ENSGT00960000187086 ENSGT00940000157037.b.b.a ENSGT00940000153912.A.a ENSGT00940000155910.c.b.b ENSGT00530000064550.B ENSGT00390000014380.h.b.b.i.b.a.a.b.c ENSGT00390000014380.h.b.b.i.b.a.a.b.d ENSGT00940000160064.a.a ENSGT00390000015768.i.b ENSGT00970000193381.a.b.a.a.b.b.a Large yellow croaker MODERN SPECIES 13 A1CF (ENSLCRG00005001626) ENSLCRG00005001608 ENSLCRG00005001433 ENSLCRG00005021554 ENSLCRG00005021548 ENSLCRG00005021526 ENSLCRG00005021494 arg1 (ENSLCRG00005021345) heatr1 (ENSLCRG00005021209) ENSLCRG00005020956 rab40b (ENSLCRG00005020875) cox11 (ENSLCRG00005020865) CBX2 (ENSLCRG00005020852) nog3 (ENSLCRG00005020849) ANKFN1 (ENSLCRG00005020825) ENSLCRG00005020817 #22 TMEM100 (ENSLCRG00005020805) ENSLCRG00005020794 STXBP4 (ENSLCRG00005020770) ENSLCRG00005020753 TNKS2 (ENSLCRG00005020692) ENSLCRG00005020650 ENSLCRG00005020644 ENSLCRG00005020624 GRID1 (ENSLCRG00005020356) ENSLCRG00005020311 ENSLCRG00005020305 ENSLCRG00005020291 WAPL (ENSLCRG00005020142) ENSLCRG00005020115 PLEKHA1 (ENSLCRG00005020089) European seabass MODERN SPECIES 11 ENSDLAG00005029322 ENSDLAG00005027013 ENSDLAG00005028500 nog3 (ENSDLAG00005013836) ENSDLAG00005031521 ANKFN1 (ENSDLAG00005018745) ENSDLAG00005018739 #22 ENSDLAG00005029839 TMEM100 (ENSDLAG00005034352) ENSDLAG00005026414 STXBP4 (ENSDLAG00005018678) ENSDLAG00005018675 ENSDLAG00005018954 ENSDLAG00005018398 ENSDLAG00005018375 ENSDLAG00005028345 ENSDLAG00005034824 ENSDLAG00005018310 ENSDLAG00005010632 ENSDLAG00005011758 ENSDLAG00005010658 ENSDLAG00005013415 Pinecone sodierfish MODERN SPECIES 18 ddx49 (ENSMMDG00005013099) homer3b (ENSMMDG00005013182) ENSMMDG00005013190 uba52 (ENSMMDG00005013196) ENSMMDG00005013205 arrdc2 (ENSMMDG00005013210) ENSMMDG00005013223 ENSMMDG00005013230 ENSMMDG00005013245 ENSMMDG00005013261 ENSMMDG00005013267 ENSMMDG00005013285 ENSMMDG00005013294 ENSMMDG00005000089 RABGAP1L (ENSMMDG00005000397) tbpl2 (ENSMMDG00005001627) #22 fam163ab (ENSMMDG00005001637) ENSMMDG00005001646 nphs2 (ENSMMDG00005001653) axdnd1 (ENSMMDG00005001658) ctns (ENSMMDG00005001669) ENSMMDG00005001675 ENSMMDG00005001680 ndufa11 (ENSMMDG00005001685) VMAC (ENSMMDG00005001688) LONP1 (ENSMMDG00005001776) rpl36 (ENSMMDG00005003091) lmnb2 (ENSMMDG00005003146) commd2 (ENSMMDG00005003216) wwtr1 (ENSMMDG00005003223) b4galt6 (ENSMMDG00005003244) Cod MODERN SPECIES 18 strn3 (ENSGMOG00000006143) ap4s1 (ENSGMOG00000006133) hectd1 (ENSGMOG00000006063) HEATR5A (ENSGMOG00000033228) ENSGMOG00000022996 ENSGMOG00000006936 ENSGMOG00000014294 ENSGMOG00000031559 ENSGMOG00000006507 ENSGMOG00000006518 tyro3 (ENSGMOG00000013831) ENSGMOG00000023984 ENSGMOG00000007697 ENSGMOG00000027362 jmjd7 (ENSGMOG00000004910) tbpl2 (ENSGMOG00000004886) #22 atg14 (ENSGMOG00000028864) #23 lgals3b (ENSGMOG00000025396) ENSGMOG00000032753 ENSGMOG00000034353 timm9 (ENSGMOG00000034176) #7 arid4a (ENSGMOG00000017334) #8 psma3 (ENSGMOG00000015528) #9 ENSGMOG00000029248 ENSGMOG00000033797 zgc:109986 (ENSGMOG00000000292) ENSGMOG00000011391 sec23a (ENSGMOG00000000840) ENSGMOG00000014544 ENSGMOG00000014535 snx6 (ENSGMOG00000014508) Otomorpha ANCESTRAL SPECIES 7 ENSGT00940000164128.b ENSGT00390000003967.b.c ENSGT00940000158100 ENSGT00940000166410 ENSGT00940000164602 ENSGT00390000007594 ENSGT00390000013762.b.b ENSGT00390000013207 ENSGT00390000004927 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT01030000234534.A.d ENSGT00940000164564.f.a ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00960000186989 ENSGT00390000017800 ENSGT00940000162043 ENSGT00950000185018 ENSGT00940000161150 ENSGT00940000161442 Otophysi ANCESTRAL SPECIES 21 ENSGT00940000166431 ENSGT00390000012799 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT01030000234987 ENSGT00940000161442 ENSGT00940000161150 ENSGT00940000162043 ENSGT00390000017800 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT01030000234534.A.d ENSGT00940000164564.f.a ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00390000017953.B ENSGT00940000156546.`b.b ENSGT00940000160590 ENSGT00940000165019 ENSGT00940000156992.f ENSGT00940000156766 Characiphysae ANCESTRAL SPECIES 4 ENSGT00940000158135 ENSGT00390000012799 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT01030000234987 ENSGT00940000161442 ENSGT00940000161150 ENSGT00940000162043 ENSGT00390000017800 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT01030000234534.A.d ENSGT00940000164564.f.a ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00390000017953.B ENSGT00940000171352 ENSGT00390000004700.b ENSGT00940000156491.a.c ENSGT01030000234517.H.b.l ENSGT00390000010056.a Channel catfish MODERN SPECIES 28 SNX6 (ENSIPUG00000001204) CFL2 (ENSIPUG00000001293) baz1a (ENSIPUG00000001305) zgc:109986 (ENSIPUG00000001412) srp54 (ENSIPUG00000001420) sec23a (ENSIPUG00000001462) ENSIPUG00000001512 CLEC14A (ENSIPUG00000001526) sstr1 (ENSIPUG00000001536) foxa1 (ENSIPUG00000001537) mipol1 (ENSIPUG00000001554) tyro3 (ENSIPUG00000001585) mgaa (ENSIPUG00000001641) ENSIPUG00000001765 jmjd7 (ENSIPUG00000001797) tbpl2 (ENSIPUG00000001811) #22 atg14 (ENSIPUG00000001820) #23 fbxo34 (ENSIPUG00000001840) #24 lgals3 (ENSIPUG00000001850) dact1 (ENSIPUG00000001860) si:ch211-185a18.2 (ENSIPUG00000001880) timm9 (ENSIPUG00000001961) #7 arid4a (ENSIPUG00000001971) #8 psma3 (ENSIPUG00000002025) #9 ENSIPUG00000002072 ENSIPUG00000002087 ENSIPUG00000002098 KRTCAP3 (ENSIPUG00000002138) fzd3b (ENSIPUG00000002151) cdc42bpa (ENSIPUG00000002186) lft2 (ENSIPUG00000002384) Characiphysae_b ANCESTRAL SPECIES 13 ENSGT00940000158135 ENSGT00390000012799 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT01030000234987 ENSGT00940000161442 ENSGT00940000161150 ENSGT00940000162043 ENSGT00390000017800 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT01030000234534.A.d ENSGT00940000164564.f.a ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00390000017953.B ENSGT00940000171352 ENSGT00390000004700.b ENSGT00940000156491.a.c ENSGT01030000234517.H.b.l ENSGT00390000010056.a Characoidei ANCESTRAL SPECIES 57 ENSGT00940000166431 ENSGT00390000012799 ENSGT00550000074824 ENSGT00390000006916.d.b ENSGT00940000166602.A ENSGT01030000234987 ENSGT00940000161442 ENSGT00940000161150 ENSGT00940000162043 ENSGT00390000017800 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT01030000234534.A.d ENSGT00940000164564.f.a ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00390000017953.B ENSGT00940000171352 ENSGT00390000004700.b ENSGT00940000156491.a.c ENSGT01030000234517.H.b.l ENSGT00390000010056.a Red-bellied piranha MODERN SPECIES 64 ENSPNAG00000005544 zgc:109986 (ENSPNAG00000008554) srp54 (ENSPNAG00000008544) sec23a (ENSPNAG00000008514) ENSPNAG00000001033 TTC6 (ENSPNAG00000001025) SSTR1 (ENSPNAG00000008364) clec14a (ENSPNAG00000000929) foxa1 (ENSPNAG00000008357) mipol1 (ENSPNAG00000000920) tyro3 (ENSPNAG00000008345) mgaa (ENSPNAG00000000905) ENSPNAG00000000884 ENSPNAG00000006638 jmjd7 (ENSPNAG00000008280) tbpl2 (ENSPNAG00000008275) #22 atg14 (ENSPNAG00000000848) #23 fbxo34 (ENSPNAG00000008261) #24 lgals3b (ENSPNAG00000000827) dact1 (ENSPNAG00000008247) si:ch211-185a18.2 (ENSPNAG00000008234) irf2bpl (ENSPNAG00000000727) timm9 (ENSPNAG00000000720) #7 arid4a (ENSPNAG00000000710) #8 psma3 (ENSPNAG00000000682) #9 ENSPNAG00000000670 ENSPNAG00000000660 KRTCAP3 (ENSPNAG00000008078) fzd3b (ENSPNAG00000000637) CDC42BPA (ENSPNAG00000008060) lft2 (ENSPNAG00000000608) Mexicana tetra MODERN SPECIES 24 ENSAMXG00000002816 zgc:109986 (ENSAMXG00000002860) srp54 (ENSAMXG00000032669) sec23a (ENSAMXG00000002897) ENSAMXG00000029727 clec14a (ENSAMXG00000029965) SSTR1 (ENSAMXG00000025379) TTC6 (ENSAMXG00000000300) foxa1 (ENSAMXG00000040223) mipol1 (ENSAMXG00000034555) tyro3 (ENSAMXG00000000312) ENSAMXG00000034478 ENSAMXG00000000319 ENSAMXG00000038074 jmjd7 (ENSAMXG00000036829) tbpl2 (ENSAMXG00000000325) #22 atg14 (ENSAMXG00000000329) #23 fbxo34 (ENSAMXG00000035812) #24 lgals3b (ENSAMXG00000042316) dact1 (ENSAMXG00000029795) si:ch211-185a18.2 (ENSAMXG00000000355) irf2bpl (ENSAMXG00000035489) arid4a (ENSAMXG00000000379) #8 timm9 (ENSAMXG00000000418) #7 psma3 (ENSAMXG00000000426) #9 ENSAMXG00000040049 ENSAMXG00000000443 ENSAMXG00000000454 fzd3b (ENSAMXG00000000459) CDC42BPA (ENSAMXG00000000461) lft2 (ENSAMXG00000000468) Electric eel MODERN SPECIES 198 BAZ1A (ENSEEEG00000004373) zgc:109986 (ENSEEEG00000004371) srp54 (ENSEEEG00000004368) ENSEEEG00000004366 sec23a (ENSEEEG00000004336) clec14a (ENSEEEG00000004332) SSTR1 (ENSEEEG00000004331) ENSEEEG00000004324 foxa1 (ENSEEEG00000004320) mipol1 (ENSEEEG00000004317) tyro3 (ENSEEEG00000004312) mgaa (ENSEEEG00000004309) ENSEEEG00000004303 ENSEEEG00000004301 jmjd7 (ENSEEEG00000004297) tbpl2 (ENSEEEG00000004293) #22 atg14 (ENSEEEG00000004291) #23 fbxo34 (ENSEEEG00000004290) #24 ENSEEEG00000004289 dact1 (ENSEEEG00000004288) Cyprinoidei ANCESTRAL SPECIES 24 ENSGT00390000012799 ENSGT00550000074824 ENSGT00390000006916.d.a.b ENSGT00390000006916.d.a.a ENSGT00940000166602.A ENSGT01030000234987 ENSGT00940000161442 ENSGT00940000161150 ENSGT00940000162043 ENSGT00390000017800 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT01030000234534.A.d ENSGT00940000164564.f.a ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000162596 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00390000017953.B ENSGT00940000156546.`b.b ENSGT00940000160590 ENSGT00940000165019 ENSGT00940000156992.f ENSGT00940000156766 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 42 ENSGT00940000166431.b ENSGT00390000012799.a ENSGT00550000074824.r ENSGT00390000006916.d.a.b.c ENSGT01030000234987.a ENSGT00390000006916.d.a.a ENSGT00940000161442.b ENSGT00940000161150 ENSGT00940000162043.b ENSGT00390000017800.h ENSGT00940000155879.i ENSGT00940000156269.a.a.b ENSGT01030000234534.A.d.a ENSGT00940000164564.f.a.m ENSGT00900000141196.e ENSGT00940000159561.o #22 ENSGT00390000011854.i #23 ENSGT00530000064222.b.h #24 ENSGT00940000165169.b.a.i ENSGT00950000183181.B.a.a ENSGT00390000012397.c ENSGT00940000160102.g #7 ENSGT00940000156159.i.a #8 ENSGT00550000074912.fb.a #9 ENSGT00960000186989 ENSGT00550000074912.gb #9 ENSGT00390000017953.B.a ENSGT00940000156546.`b.b.c ENSGT00940000167557.a ENSGT00940000162596 ENSGT00940000160102.h #7 Cyprininae_a ANCESTRAL SPECIES 108 ENSGT00950000183000.c.b.h.a ENSGT00940000166431.b ENSGT00390000012799.a ENSGT00550000074824.r ENSGT00390000006916.d.a.b.c ENSGT01030000234987.a ENSGT00940000161442.b ENSGT00940000161150 ENSGT00940000162043.b ENSGT00390000017800.h ENSGT00940000155879.i ENSGT00940000156269.a.a.b ENSGT01030000234534.A.d.a ENSGT00940000164564.f.a.m ENSGT00900000141196.e ENSGT00940000159561.o #22 ENSGT00390000011854.i #23 ENSGT00530000064222.b.h #24 ENSGT00940000165169.b.a.i ENSGT00950000183181.B.a.a ENSGT00390000012397.c ENSGT00940000160102.g #7 ENSGT00940000156159.i.a #8 ENSGT00550000074912.fb.a #9 ENSGT00960000186989 ENSGT00390000017953.B.a ENSGT00940000156546.`b.b.c ENSGT00940000167557.a ENSGT00940000156992.f.b ENSGT00940000156766.b ENSGT00950000183142.a.b.a.b.a Golden-line barbel MODERN SPECIES 83 ENSSGRG00000049141 zgc:109986 (ENSSGRG00000049217) srp54 (ENSSGRG00000049225) SEC23A (ENSSGRG00000049268) clec14a (ENSSGRG00000049389) SSTR1 (ENSSGRG00000049391) ENSSGRG00000049393 foxa1 (ENSSGRG00000049395) mipol1 (ENSSGRG00000049400) tyro3 (ENSSGRG00000049408) mgaa (ENSSGRG00000049413) ENSSGRG00000049415 ENSSGRG00000049416 ENSSGRG00000049428 jmjd7 (ENSSGRG00000049645) tbpl2 (ENSSGRG00000049654) #22 atg14 (ENSSGRG00000049655) #23 fbxo34 (ENSSGRG00000049656) #24 lgals3b (ENSSGRG00000049657) dact1 (ENSSGRG00000049658) si:ch211-185a18.2 (ENSSGRG00000049659) timm9 (ENSSGRG00000049660) #7 arid4a (ENSSGRG00000049661) #8 psma3 (ENSSGRG00000049859) #9 ENSSGRG00000049860 ENSSGRG00000049861 HNRNPU (ENSSGRG00000049864) ENSSGRG00000049865 KIF26B (ENSSGRG00000049866) smyd3 (ENSSGRG00000049867) tfb2m (ENSSGRG00000049868) Goldfish MODERN SPECIES 8 ENSCARG00000035944 zgc:109986 (ENSCARG00000035883) srp54 (ENSCARG00000035849) ENSCARG00000035835 sec23a (ENSCARG00000035551) SSTR1 (ENSCARG00000035529) clec14a (ENSCARG00000035522) ENSCARG00000035470 foxa1 (ENSCARG00000035464) mipol1 (ENSCARG00000035445) tyro3 (ENSCARG00000033161) mgaa (ENSCARG00000033014) ENSCARG00000032988 ENSCARG00000030075 jmjd7 (ENSCARG00000029886) tbpl2 (ENSCARG00000029870) #22 atg14 (ENSCARG00000029842) #23 fbxo34 (ENSCARG00000029821) #24 lgals3b (ENSCARG00000029803) dact1 (ENSCARG00000029790) si:ch211-185a18.2 (ENSCARG00000029720) timm9 (ENSCARG00000029674) #7 arid4a (ENSCARG00000009115) #8 psma3 (ENSCARG00000009077) #9 ENSCARG00000009064 HNRNPU (ENSCARG00000007662) efcab2 (ENSCARG00000007617) KIF26B (ENSCARG00000007505) smyd3 (ENSCARG00000007465) tfb2m (ENSCARG00000007437) khk (ENSCARG00000007352) Cyprininae ANCESTRAL SPECIES 726 ENSGT00940000155879.j ENSGT00940000156269.a.a.a ENSGT00940000164564.f.a.n ENSGT00900000141196.f ENSGT00940000159561.p #22 ENSGT00390000011854.j #23 ENSGT00530000064222.b.g #24 ENSGT00940000165169.b.a.j ENSGT00950000183181.B.a.b ENSGT00390000012397.d ENSGT00950000183519 Cyprininae_a ANCESTRAL SPECIES 24 ENSGT00940000158745.k.a ENSGT00390000002766.b.b ENSGT00940000154940.a ENSGT00950000183000.c.b.h.b ENSGT00940000166431.a ENSGT00390000012799.b ENSGT00550000074824.q ENSGT00390000006916.d.a.b.d ENSGT01030000234987.b ENSGT00940000161442.a ENSGT00390000017800.g ENSGT00940000155879.j ENSGT00940000156269.a.a.a ENSGT00940000164564.f.a.n ENSGT00900000141196.f ENSGT00940000159561.p #22 ENSGT00390000011854.j #23 ENSGT00530000064222.b.g #24 ENSGT00940000165169.b.a.j ENSGT00950000183181.B.a.b ENSGT00390000012397.d ENSGT00950000183519 ENSGT00940000165313 ENSGT00940000156159.i.b #8 ENSGT00550000074912.gb #9 ENSGT00390000017953.B.b ENSGT00940000156546.`b.b.d ENSGT00940000160590 ENSGT00940000165019 ENSGT00940000156992.f.a ENSGT00940000156766.a Common carp reference MODERN SPECIES 4 EGLN3 (ENSCCRG00000073675) snx6 (ENSCCRG00000005125) cfl2 (ENSCCRG00000022914) ENSCCRG00000022868 srp54 (ENSCCRG00000022883) ENSCCRG00000022738 ENSCCRG00000074542 SSTR1 (ENSCCRG00000013812) clec14a (ENSCCRG00000013814) mipol1 (ENSCCRG00000072458) foxa1 (ENSCCRG00000013804) tyro3 (ENSCCRG00000043724) mgaa (ENSCCRG00000043749) ENSCCRG00000043814 jmjd7 (ENSCCRG00000044105) tbpl2 (ENSCCRG00000063315) #22 atg14 (ENSCCRG00000001580) #23 fbxo34 (ENSCCRG00000007660) #24 lgals3b (ENSCCRG00000054293) dact1 (ENSCCRG00000001724) ENSCCRG00000068629 arid4a (ENSCCRG00000003569) #8 psma3 (ENSCCRG00000049361) #9 ENSCCRG00000069324 HNRNPU (ENSCCRG00000049268) ENSCCRG00000049239 smyd3 (ENSCCRG00000021325) tfb2m (ENSCCRG00000044274) ENSCCRG00000049781 ENSCCRG00000049778 ENSCCRG00000049777 Golden-line barbel MODERN SPECIES 117 sptssa (ENSSGRG00000030386) snx6 (ENSSGRG00000030396) CFL2 (ENSSGRG00000031642) ENSSGRG00000031644 zgc:109986 (ENSSGRG00000031645) srp54 (ENSSGRG00000031646) ENSSGRG00000031719 clec14a (ENSSGRG00000031938) SSTR1 (ENSSGRG00000031939) mipol1 (ENSSGRG00000031943) vim (ENSSGRG00000031944) tyro3 (ENSSGRG00000031945) mgaa (ENSSGRG00000031957) ENSSGRG00000031958 ENSSGRG00000031960 tbpl2 (ENSSGRG00000031965) #22 atg14 (ENSSGRG00000031967) #23 fbxo34 (ENSSGRG00000031969) #24 lgals3b (ENSSGRG00000031973) dact1 (ENSSGRG00000031976) si:ch211-185a18.2 (ENSSGRG00000031979) ENSSGRG00000031982 arid4a (ENSSGRG00000031985) #8 psma3 (ENSSGRG00000031990) #9 ENSSGRG00000031993 HNRNPU (ENSSGRG00000031994) EFCAB2 (ENSSGRG00000031997) ENSSGRG00000031998 KIF26B (ENSSGRG00000031999) smyd3 (ENSSGRG00000032002) tfb2m (ENSSGRG00000032003) Zebrafish MODERN SPECIES 8 ENSDARG00000063233 ENSDARG00000099745 zgc:109986 (ENSDARG00000102608) srp54 (ENSDARG00000098367) sec23a (ENSDARG00000104230) ENSDARG00000104695 clec14a (ENSDARG00000103533) SSTR1 (ENSDARG00000104922) TTC6 (ENSDARG00000104125) foxa1 (ENSDARG00000102138) mipol1 (ENSDARG00000104845) tyro3 (ENSDARG00000005356) mgaa (ENSDARG00000078784) ENSDARG00000103746 jmjd7 (ENSDARG00000035546) tbpl2 (ENSDARG00000097302) #22 atg14 (ENSDARG00000002670) #23 fbxo34 (ENSDARG00000071259) #24 ENSDARG00000077035 lgals3b (ENSDARG00000044001) dact1 (ENSDARG00000101635) si:ch211-185a18.2 (ENSDARG00000097772) ENSDARG00000096963 irf2bpl (ENSDARG00000004297) timm9 (ENSDARG00000043865) #7 arid4a (ENSDARG00000043873) #8 psma3 (ENSDARG00000086618) #9 ENSDARG00000062785 HNRNPU (ENSDARG00000015206) efcab2 (ENSDARG00000074323) KIF26B (ENSDARG00000013343) Clupeiformes ANCESTRAL SPECIES 25 ENSGT00420000029802 ENSGT00950000183032.B.b.a ENSGT00390000014780 ENSGT00940000164128.b ENSGT00390000003967.b.c ENSGT00940000158100 ENSGT00940000166410 ENSGT00940000164602 ENSGT00390000007594 ENSGT00940000157393 ENSGT00940000155879 ENSGT00940000156269.a.a ENSGT01030000234534.A.d ENSGT00940000164564.f.a ENSGT00900000141196 ENSGT00940000159561 #22 ENSGT00390000011854 #23 ENSGT00530000064222.b #24 ENSGT00940000165169.b.a ENSGT00950000183181.B.a ENSGT00390000012397 ENSGT00940000160102 #7 ENSGT00940000156159 #8 ENSGT00550000074912 #9 ENSGT00390000017800 ENSGT00940000162043 ENSGT00950000185018 ENSGT00940000161150 ENSGT00940000161442 ENSGT01030000234987 ENSGT00390000006916.d.b Atlantic herring MODERN SPECIES 5 ccdc32 (ENSCHAG00000018589) prlh2r (ENSCHAG00000018582) BAHD1 (ENSCHAG00000018568) ivd (ENSCHAG00000018102) itpka (ENSCHAG00000018086) ltk (ENSCHAG00000017293) RPAP1 (ENSCHAG00000016968) ENSCHAG00000016934 ENSCHAG00000016903 lrrc57 (ENSCHAG00000016895) tyro3 (ENSCHAG00000015429) ENSCHAG00000015388 ENSCHAG00000015381 ENSCHAG00000015376 jmjd7 (ENSCHAG00000015303) tbpl2 (ENSCHAG00000015292) #22 atg14 (ENSCHAG00000015278) #23 fbxo34 (ENSCHAG00000015257) #24 lgals3b (ENSCHAG00000015244) dact1 (ENSCHAG00000015231) si:ch211-185a18.2 (ENSCHAG00000015118) timm9 (ENSCHAG00000015077) #7 arid4a (ENSCHAG00000013560) #8 psma3 (ENSCHAG00000013320) #9 mipol1 (ENSCHAG00000013310) foxa1 (ENSCHAG00000013294) ENSCHAG00000013255 SSTR1 (ENSCHAG00000013244) clec14a (ENSCHAG00000013237) ENSCHAG00000013228 ENSCHAG00000013201 Denticle herring MODERN SPECIES THBS1 (ENSDCDG00000000593) acp7 (ENSDCDG00000001340) ENSDCDG00000001347 haus2 (ENSDCDG00000001351) lrrc57 (ENSDCDG00000001355) tyro3 (ENSDCDG00000001367) THBS1 (ENSDCDG00000001391) ENSDCDG00000001392 acp7 (ENSDCDG00000001394) ENSDCDG00000001395 haus2 (ENSDCDG00000001398) tyro3 (ENSDCDG00000001403) ENSDCDG00000001409 ENSDCDG00000001418 jmjd7 (ENSDCDG00000001424) tbpl2 (ENSDCDG00000001426) #22 atg14 (ENSDCDG00000001429) #23 fbxo34 (ENSDCDG00000001433) #24 ENSDCDG00000001434 dact1 (ENSDCDG00000001435) si:ch211-185a18.2 (ENSDCDG00000001436) timm9 (ENSDCDG00000001437) #7 arid4a (ENSDCDG00000001477) #8 psma3 (ENSDCDG00000001830) #9 mipol1 (ENSDCDG00000001835) foxa1 (ENSDCDG00000001840) ENSDCDG00000001843 ENSDCDG00000001859 SSTR1 (ENSDCDG00000001864) clec14a (ENSDCDG00000001866) sec23a (ENSDCDG00000001879) Elephant shark MODERN SPECIES 1513 timm9 (ENSCMIG00000001565) #7 ENSCMIG00000001560 arid4a (ENSCMIG00000001314) #8 psma3 (ENSCMIG00000001027) #9 ENSCMIG00000000948 actr10 (ENSCMIG00000000930) #10 ENSCMIG00000000919 #11 SLC35F4 (ENSCMIG00000000913) #13 ENSCMIG00000000909 #14 naa30 (ENSCMIG00000000905) #15 ap5m1 (ENSCMIG00000000893) #16 exoc5 (ENSCMIG00000000611) #17 otx2b (ENSCMIG00000000469) #18 PELI2 (ENSCMIG00000000436) #20 KTN1 (ENSCMIG00000000331) #21 tbpl2 (ENSCMIG00000000286) #22 atg14 (ENSCMIG00000000239) #23 fbxo34 (ENSCMIG00000000232) #24 lgals3 (ENSCMIG00000000195) #26 SRSF5 (ENSCMIG00000018629) ENSCMIG00000018615 SLC10A1 (ENSCMIG00000018604) smoc1 (ENSCMIG00000018577) ENSCMIG00000018560 ENSCMIG00000018559 SLC8A3 (ENSCMIG00000018555) ENSCMIG00000018551 ENSCMIG00000018550 ENSCMIG00000018548 med6 (ENSCMIG00000018546) ENSCMIG00000018542 Ciona ANCESTRAL SPECIES ENSGT00940000159561 #22 Ciona savignyi MODERN SPECIES 223 ENSCSAVG00000007906 ENSCSAVG00000007894 ENSCSAVG00000007848 ENSCSAVG00000007844 ENSCSAVG00000007841 ENSCSAVG00000007705 ENSCSAVG00000007703 ENSCSAVG00000007555 ENSCSAVG00000007365 ENSCSAVG00000007362 ENSCSAVG00000007301 ENSCSAVG00000007173 ENSCSAVG00000007169 ENSCSAVG00000007164 ENSCSAVG00000007159 ENSCSAVG00000007153 #22 ENSCSAVG00000007099 ENSCSAVG00000006971 ENSCSAVG00000006956 ENSCSAVG00000006836 ENSCSAVG00000006783 ENSCSAVG00000006780 ENSCSAVG00000006775 ENSCSAVG00000006773 ENSCSAVG00000006763 ENSCSAVG00000006744 ENSCSAVG00000006741 ENSCSAVG00000006733 ENSCSAVG00000006726 ENSCSAVG00000006723 ENSCSAVG00000006712