Mammalia	ANCESTRAL SPECIES	10	ENSGT00940000164634	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000164047.c.b	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Theria	ANCESTRAL SPECIES	11	ENSGT01070000254624	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000164047.c.b	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Eutheria	ANCESTRAL SPECIES	20	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000164047.c.b	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Boreoeutheria	ANCESTRAL SPECIES	22	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Euarchontoglires	ANCESTRAL SPECIES	22	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Primates	ANCESTRAL SPECIES	24	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Haplorrhini	ANCESTRAL SPECIES	25	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Simiiformes	ANCESTRAL SPECIES	24	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Catarrhini	ANCESTRAL SPECIES	23	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b.a.a #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00440000033919.b #28	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Hominoidea	ANCESTRAL SPECIES	24	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT01100000265012 #8	ENSGT00910000147179 #9	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b.a.a #17	ENSGT00390000002428.a.g.b.a.b #18	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00440000033919.b #28	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Hominidae	ANCESTRAL SPECIES	24	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT01100000265012 #8	ENSGT00910000147179 #9	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b.a.a #17	ENSGT00390000002428.a.g.b.a.b #18	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00440000033919.b #28	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	26	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT01100000265012 #8	ENSGT00910000147179 #9	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b.a.a #17	ENSGT00390000002428.a.g.b.a.b #18	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00440000033919.b #28	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Gorilla	MODERN SPECIES	9	CTIF (ENSGGOG00000015204) #7	ENSGGOG00000037898 #8	ENSGGOG00000022625 #9	ZBTB7C (ENSGGOG00000008438) #10	SMAD2 (ENSGGOG00000004706) #11	ENSGGOG00000037285 #12	SKOR2 (ENSGGOG00000006679) #13	ENSGGOG00000022397 #14	IER3IP1 (ENSGGOG00000027939) #15	HDHD2 (ENSGGOG00000016414) #16	ENSGGOG00000010534 #17	ENSGGOG00000044154 #18	ENSGGOG00000041035 #19	ENSGGOG00000040155 #20	KATNAL2 (ENSGGOG00000006796) #21	PIAS2 (ENSGGOG00000025821) #22	ST8SIA5 (ENSGGOG00000013794) #23	LOXHD1 (ENSGGOG00000005588) #24	RNF165 (ENSGGOG00000005584) #25	HAUS1 (ENSGGOG00000010098) #26	ATP5F1A (ENSGGOG00000016560) #27	ENSGGOG00000041127 #28	PSTPIP2 (ENSGGOG00000025030) #29	EPG5 (ENSGGOG00000007816) #30	SIGLEC15 (ENSGGOG00000007810) #31	SLC14A1 (ENSGGOG00000008152) #32	SLC14A2 (ENSGGOG00000001047) #33	SETBP1 (ENSGGOG00000014151) #34	SYT4 (ENSGGOG00000006097) #35	RIT2 (ENSGGOG00000005603) #36	PIK3C3 (ENSGGOG00000015471) #37
Homo/Pan group	ANCESTRAL SPECIES	25	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT01100000265012 #8	ENSGT00910000147179 #9	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b.a.a #17	ENSGT00390000002428.a.g.b.a.b #18	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00440000033919.b #28	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Pan	ANCESTRAL SPECIES	24	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT01100000265012 #8	ENSGT00910000147179 #9	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00910000148711 #12	ENSGT00390000016823.q	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b.a.a #17	ENSGT00390000002428.a.g.b.a.b #18	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00440000033919.b #28	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Chimpanzee	MODERN SPECIES	9	SMAD7 (ENSPTRG00000010010)	CTIF (ENSPTRG00000010009) #7	ENSPTRG00000045008 #8	ENSPTRG00000050449 #9	ZBTB7C (ENSPTRG00000010006) #10	SMAD2 (ENSPTRG00000043695) #11	ENSPTRG00000051707 #12	ENSPTRG00000049336	ENSPTRG00000051288	SKOR2 (ENSPTRG00000033850) #13	IER3IP1 (ENSPTRG00000010002) #15	HDHD2 (ENSPTRG00000010001) #16	ELOA2 (ENSPTRG00000029302) #17	ENSPTRG00000041809 #18	KATNAL2 (ENSPTRG00000009999) #21	PIAS2 (ENSPTRG00000009998) #22	ST8SIA5 (ENSPTRG00000009997) #23	LOXHD1 (ENSPTRG00000009995) #24	RNF165 (ENSPTRG00000009994) #25	C18orf25 (ENSPTRG00000009993)	HAUS1 (ENSPTRG00000009992) #26	ATP5F1A (ENSPTRG00000009991) #27	ENSPTRG00000051812 #28	PSTPIP2 (ENSPTRG00000009990) #29	EPG5 (ENSPTRG00000009989) #30	SIGLEC15 (ENSPTRG00000024035) #31	SLC14A1 (ENSPTRG00000009988) #32	SLC14A2 (ENSPTRG00000009987) #33	SETBP1 (ENSPTRG00000009986) #34	SYT4 (ENSPTRG00000009985) #35	RIT2 (ENSPTRG00000009984) #36
Bonobo	MODERN SPECIES	9	C18orf32 (ENSPPAG00000027512)	DYM (ENSPPAG00000033907)	ENSPPAG00000031318	CTIF (ENSPPAG00000023554) #7	ENSPPAG00000041550 #8	ENSPPAG00000033132 #9	ZBTB7C (ENSPPAG00000039903) #10	SMAD2 (ENSPPAG00000035419) #11	ENSPPAG00000032994 #12	ENSPPAG00000030667	IER3IP1 (ENSPPAG00000029166) #15	HDHD2 (ENSPPAG00000028597) #16	ENSPPAG00000028060 #17	ENSPPAG00000027606 #18	KATNAL2 (ENSPPAG00000019290) #21	PIAS2 (ENSPPAG00000035511) #22	ST8SIA5 (ENSPPAG00000032695) #23	LOXHD1 (ENSPPAG00000023447) #24	RNF165 (ENSPPAG00000035141) #25	C18orf25 (ENSPPAG00000034677)	HAUS1 (ENSPPAG00000034062) #26	ATP5F1A (ENSPPAG00000030055) #27	ENSPPAG00000028807 #28	PSTPIP2 (ENSPPAG00000028251) #29	EPG5 (ENSPPAG00000025948) #30	SIGLEC15 (ENSPPAG00000018825) #31	SLC14A1 (ENSPPAG00000012434) #32	SLC14A2 (ENSPPAG00000036617) #33	SETBP1 (ENSPPAG00000037611) #34	SYT4 (ENSPPAG00000035230) #35	RIT2 (ENSPPAG00000034063) #36
Human	MODERN SPECIES	9	ACAA2 (ENSG00000167315)	LIPG (ENSG00000101670)	RPL17 (ENSG00000265681)	RPL17-C18orf32 (ENSG00000215472)	C18orf32 (ENSG00000177576)	DYM (ENSG00000141627)	SMAD7 (ENSG00000101665)	CTIF (ENSG00000134030) #7	ZBTB7C (ENSG00000184828) #10	SMAD2 (ENSG00000175387) #11	SKOR2 (ENSG00000215474) #13	IER3IP1 (ENSG00000134049) #15	HDHD2 (ENSG00000167220) #16	ELOA2 (ENSG00000206181) #17	KATNAL2 (ENSG00000167216) #21	PIAS2 (ENSG00000078043) #22	ST8SIA5 (ENSG00000101638) #23	LOXHD1 (ENSG00000167210) #24	RNF165 (ENSG00000141622) #25	C18orf25 (ENSG00000152242)	HAUS1 (ENSG00000152240) #26	ATP5F1A (ENSG00000152234) #27	PSTPIP2 (ENSG00000152229) #29	SIGLEC15 (ENSG00000197046) #31	EPG5 (ENSG00000152223) #30	SLC14A1 (ENSG00000141469) #32	SLC14A2 (ENSG00000132874) #33	SETBP1 (ENSG00000152217) #34	SYT4 (ENSG00000132872) #35	RIT2 (ENSG00000152214) #36	PIK3C3 (ENSG00000078142) #37
Orangutan	MODERN SPECIES	9	LIPG (ENSPPYG00000009153)	ENSPPYG00000009151	C18orf32 (ENSPPYG00000033389)	DYM (ENSPPYG00000009149)	SMAD7 (ENSPPYG00000009148)	CTIF (ENSPPYG00000009147) #7	ZBTB7C (ENSPPYG00000009145) #10	SMAD2 (ENSPPYG00000009144) #11	ENSPPYG00000037397 #12	ENSPPYG00000030833	SKOR2 (ENSPPYG00000009142) #13	IER3IP1 (ENSPPYG00000009140) #15	HDHD2 (ENSPPYG00000009139) #16	ENSPPYG00000009137 #18	KATNAL2 (ENSPPYG00000009138) #21	PIAS2 (ENSPPYG00000009136) #22	ST8SIA5 (ENSPPYG00000009135) #23	LOXHD1 (ENSPPYG00000009134) #24	RNF165 (ENSPPYG00000009133) #25	C18H18orf25 (ENSPPYG00000009132)	HAUS1 (ENSPPYG00000009131) #26	ATP5F1A (ENSPPYG00000009130) #27	PSTPIP2 (ENSPPYG00000009129) #29	EPG5 (ENSPPYG00000009128) #30	SIGLEC15 (ENSPPYG00000009127) #31	SLC14A1 (ENSPPYG00000009125) #32	SLC14A2 (ENSPPYG00000009124) #33	SETBP1 (ENSPPYG00000009123) #34	SYT4 (ENSPPYG00000009122) #35	RIT2 (ENSPPYG00000009121) #36	PIK3C3 (ENSPPYG00000009120) #37
Gibbon	MODERN SPECIES	19	ENSNLEG00000011500 #9	ZBTB7C (ENSNLEG00000011492) #10	SMAD2 (ENSNLEG00000011463) #11	ENSNLEG00000011462	ENSNLEG00000029516	ENSNLEG00000029297 #13	IER3IP1 (ENSNLEG00000011450) #15	ENSNLEG00000029962	HDHD2 (ENSNLEG00000036069) #16	KATNAL2 (ENSNLEG00000011402) #21	ELOA2 (ENSNLEG00000011422) #17	ENSNLEG00000026544 #18	ENSNLEG00000034552 #18	ENSNLEG00000031576 #18	ENSNLEG00000032966 #18	PIAS2 (ENSNLEG00000011351) #22	ST8SIA5 (ENSNLEG00000011343) #23	LOXHD1 (ENSNLEG00000011276) #24	RNF165 (ENSNLEG00000011270) #25	C18orf25 (ENSNLEG00000011251)	HAUS1 (ENSNLEG00000011216) #26	ATP5F1A (ENSNLEG00000010973) #27	PSTPIP2 (ENSNLEG00000010965) #29	EPG5 (ENSNLEG00000010921) #30	SIGLEC15 (ENSNLEG00000010918) #31	SLC14A1 (ENSNLEG00000010845) #32	SLC14A2 (ENSNLEG00000010799) #33	SETBP1 (ENSNLEG00000010776) #34	SYT4 (ENSNLEG00000010756) #35	RIT2 (ENSNLEG00000010755) #36	PIK3C3 (ENSNLEG00000010650) #37
Cercopithecidae	ANCESTRAL SPECIES	25	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.b	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b.a.a #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00440000033919.b #28	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Cercopithecinae	ANCESTRAL SPECIES	22	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b.a.a #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00440000033919.b #28	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Cercopithecinae_a	ANCESTRAL SPECIES	21	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT01100000264016	ENSGT01030000234542.b.b.a.a.a.b.t.a	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b.a.a #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00440000033919.b #28	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Cercopithecinae_b	ANCESTRAL SPECIES	25	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b.a	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT01100000264016	ENSGT01030000234542.b.b.a.a.a.b.t.a	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b.a.a #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Cercopithecinae_d	ANCESTRAL SPECIES	40	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT01100000264016	ENSGT01030000234542.b.b.a.a.a.b.t.a	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b.a.a #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Drill	MODERN SPECIES	709																PIAS2 (ENSMLEG00000044179) #22	ST8SIA5 (ENSMLEG00000030785) #23	LOXHD1 (ENSMLEG00000040256) #24	RNF165 (ENSMLEG00000035276) #25	C18orf25 (ENSMLEG00000030148)	HAUS1 (ENSMLEG00000036949) #26	ENSMLEG00000000233	PSTPIP2 (ENSMLEG00000039022) #29	EPG5 (ENSMLEG00000033487) #30	SLC14A1 (ENSMLEG00000042901) #32	SLC14A2 (ENSMLEG00000033504) #33	SETBP1 (ENSMLEG00000004384) #34	SYT4 (ENSMLEG00000032128) #35	RIT2 (ENSMLEG00000038122) #36
Sooty mangabey	MODERN SPECIES	190	ENSCATG00000037257	ENSCATG00000018328	DYM (ENSCATG00000031272)	ENSCATG00000037245	SMAD7 (ENSCATG00000037681)	CTIF (ENSCATG00000038134) #7	ENSCATG00000045052	ENSCATG00000005038	ZBTB7C (ENSCATG00000044413) #10	SMAD2 (ENSCATG00000003842) #11	SKOR2 (ENSCATG00000035815) #13	IER3IP1 (ENSCATG00000035811) #15	HDHD2 (ENSCATG00000035277) #16	KATNAL2 (ENSCATG00000037094) #21	ELOA2 (ENSCATG00000032113) #17	PIAS2 (ENSCATG00000034031) #22	ST8SIA5 (ENSCATG00000030338) #23	LOXHD1 (ENSCATG00000036618) #24	RNF165 (ENSCATG00000037696) #25	C18orf25 (ENSCATG00000039068)	HAUS1 (ENSCATG00000025348) #26	ATP5F1A (ENSCATG00000025898) #27	PSTPIP2 (ENSCATG00000033892) #29	EPG5 (ENSCATG00000038496) #30	SIGLEC15 (ENSCATG00000043629) #31	SLC14A1 (ENSCATG00000025983) #32	SLC14A2 (ENSCATG00000032025) #33	SETBP1 (ENSCATG00000033792) #34	SYT4 (ENSCATG00000032803) #35	RIT2 (ENSCATG00000034055) #36	PIK3C3 (ENSCATG00000041912) #37
Olive baboon	MODERN SPECIES	10	ACAA2 (ENSPANG00000002878)	LIPG (ENSPANG00000024235)	ENSPANG00000031295	C18orf32 (ENSPANG00000040941)	ENSPANG00000037588	ENSPANG00000046129	SMAD7 (ENSPANG00000025519)	CTIF (ENSPANG00000017087) #7	ZBTB7C (ENSPANG00000016942) #10	SMAD2 (ENSPANG00000025520) #11	SKOR2 (ENSPANG00000017535) #13	IER3IP1 (ENSPANG00000041314) #15	HDHD2 (ENSPANG00000010312) #16	ELOA2 (ENSPANG00000049945) #17	KATNAL2 (ENSPANG00000017088) #21	PIAS2 (ENSPANG00000016213) #22	ST8SIA5 (ENSPANG00000024947) #23	LOXHD1 (ENSPANG00000025288) #24	RNF165 (ENSPANG00000025287) #25	C18orf25 (ENSPANG00000006488)	HAUS1 (ENSPANG00000029808) #26	ATP5F1A (ENSPANG00000007341) #27	PSTPIP2 (ENSPANG00000019094) #29	EPG5 (ENSPANG00000009665) #30	SIGLEC15 (ENSPANG00000013868) #31	SLC14A1 (ENSPANG00000010058) #32	SLC14A2 (ENSPANG00000010314) #33	SETBP1 (ENSPANG00000014223) #34	ENSPANG00000044709	SYT4 (ENSPANG00000036999) #35	RIT2 (ENSPANG00000009666) #36
Macaca	ANCESTRAL SPECIES	22	ENSGT00950000183010.a.a.a.b.a.a.a.a.b.b	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT01100000264016	ENSGT01030000234542.b.b.a.a.a.b.t.a	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b.a.a.a #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00440000033919.b #28	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Macaca_a	ANCESTRAL SPECIES	21	ENSGT00940000159394	ENSGT00940000155478.r	ENSGT01100000263493.a.b.a.a.b.b.a.b.a.a.a.a.b.a.a	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b.a.a.a #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT01100000263493.a.b.a.a.a.b.a.a.b.b.a.a.b.b	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Rhesus	MODERN SPECIES	9	LIPG (ENSMMUG00000019054)	ENSMMUG00000038584	ENSMMUG00000064858	RPL17 (ENSMMUG00000018837)	DYM (ENSMMUG00000001760)	SMAD7 (ENSMMUG00000056276)	CTIF (ENSMMUG00000020898) #7	ZBTB7C (ENSMMUG00000015704) #10	SMAD2 (ENSMMUG00000007816) #11	ENSMMUG00000050569	SKOR2 (ENSMMUG00000048459) #13	IER3IP1 (ENSMMUG00000059289) #15	HDHD2 (ENSMMUG00000010999) #16	KATNAL2 (ENSMMUG00000015952) #21	ELOA2 (ENSMMUG00000044172) #17	PIAS2 (ENSMMUG00000004498) #22	ENSMMUG00000050406	ST8SIA5 (ENSMMUG00000002742) #23	LOXHD1 (ENSMMUG00000017246) #24	RNF165 (ENSMMUG00000017243) #25	C18H18orf25 (ENSMMUG00000011473)	ENSMMUG00000056307	HAUS1 (ENSMMUG00000003124) #26	ATP5F1A (ENSMMUG00000003570) #27	PSTPIP2 (ENSMMUG00000003566) #29	EPG5 (ENSMMUG00000003562) #30	SIGLEC15 (ENSMMUG00000003561) #31	SLC14A1 (ENSMMUG00000011037) #32	ENSMMUG00000061645	SLC14A2 (ENSMMUG00000004010) #33	SETBP1 (ENSMMUG00000004997) #34
Crab-eating macaque	MODERN SPECIES	9	ENSMFAG00000065559	ENSMFAG00000064429	SMAD7 (ENSMFAG00000042998)	ENSMFAG00000061902	CTIF (ENSMFAG00000037903) #7	ENSMFAG00000052298	ENSMFAG00000058784	ZBTB7C (ENSMFAG00000031667) #10	SMAD2 (ENSMFAG00000045652) #11	ENSMFAG00000063952 #13	IER3IP1 (ENSMFAG00000060309) #15	HDHD2 (ENSMFAG00000012951) #16	KATNAL2 (ENSMFAG00000029779) #21	ENSMFAG00000031677 #17	ENSMFAG00000031695 #17	PIAS2 (ENSMFAG00000031982) #22	ENSMFAG00000050857	ST8SIA5 (ENSMFAG00000035970) #23	LOXHD1 (ENSMFAG00000037181) #24	RNF165 (ENSMFAG00000000616) #25	C18orf25 (ENSMFAG00000042249)	ENSMFAG00000052445	HAUS1 (ENSMFAG00000043557) #26	ENSMFAG00000049075	ATP5F1A (ENSMFAG00000001649) #27	PSTPIP2 (ENSMFAG00000037150) #29	EPG5 (ENSMFAG00000042030) #30	SIGLEC15 (ENSMFAG00000031829) #31	SLC14A1 (ENSMFAG00000032229) #32	SLC14A2 (ENSMFAG00000033369) #33	ENSMFAG00000052144 #34
Pig-tailed macaque	MODERN SPECIES	83															ENSMNEG00000027937 #17	PIAS2 (ENSMNEG00000039217) #22	ST8SIA5 (ENSMNEG00000044054) #23	LOXHD1 (ENSMNEG00000034385) #24	RNF165 (ENSMNEG00000036521) #25	C18orf25 (ENSMNEG00000029969)	HAUS1 (ENSMNEG00000038252) #26	ATP5F1A (ENSMNEG00000043078) #27	ENSMNEG00000042346 #28	PSTPIP2 (ENSMNEG00000038319) #29	EPG5 (ENSMNEG00000043373) #30	SIGLEC15 (ENSMNEG00000045537) #31	SLC14A1 (ENSMNEG00000028121) #32	SLC14A2 (ENSMNEG00000037033) #33	SETBP1 (ENSMNEG00000021021) #34	ENSMNEG00000042877	SYT4 (ENSMNEG00000037117) #35
Vervet Monkey	MODERN SPECIES	9	MYO5B (ENSCSAG00000018060)	ACAA2 (ENSCSAG00000018054)	LIPG (ENSCSAG00000018043)	C18orf32 (ENSCSAG00000018029)	DYM (ENSCSAG00000018028)	ENSCSAG00000018569	SMAD7 (ENSCSAG00000018024)	CTIF (ENSCSAG00000018021) #7	ZBTB7C (ENSCSAG00000018018) #10	SMAD2 (ENSCSAG00000018016) #11	SKOR2 (ENSCSAG00000018012) #13	IER3IP1 (ENSCSAG00000018009) #15	HDHD2 (ENSCSAG00000018007) #16	KATNAL2 (ENSCSAG00000018001) #21	ELOA2 (ENSCSAG00000018570) #17	PIAS2 (ENSCSAG00000017995) #22	ST8SIA5 (ENSCSAG00000017993) #23	LOXHD1 (ENSCSAG00000017984) #24	RNF165 (ENSCSAG00000017974) #25	C18orf25 (ENSCSAG00000017972)	HAUS1 (ENSCSAG00000017970) #26	ATP5F1A (ENSCSAG00000017968) #27	PSTPIP2 (ENSCSAG00000017965) #29	EPG5 (ENSCSAG00000017960) #30	SIGLEC15 (ENSCSAG00000017954) #31	SLC14A1 (ENSCSAG00000017952) #32	SLC14A2 (ENSCSAG00000017951) #33	ENSCSAG00000017949 #34	ENSCSAG00000017947 #34	SYT4 (ENSCSAG00000017945) #35	RIT2 (ENSCSAG00000017944) #36
Rhinopithecus	ANCESTRAL SPECIES	314												ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029 #26	ENSGT00550000074846.i #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00950000182878.b.b.`b.a.b.b
Golden snub-nosed monkey	MODERN SPECIES	2593																PIAS2 (ENSRROG00000042621) #22	ST8SIA5 (ENSRROG00000031162) #23	LOXHD1 (ENSRROG00000040918) #24	RNF165 (ENSRROG00000031586) #25	C18orf25 (ENSRROG00000033480)	HAUS1 (ENSRROG00000037112) #26	ATP5F1A (ENSRROG00000045593) #27	PSTPIP2 (ENSRROG00000028940) #29	ENSRROG00000034815 #30
Black snub-nosed monkey	MODERN SPECIES	1904										SKOR2 (ENSRBIG00000043935) #13	IER3IP1 (ENSRBIG00000028883) #15	ENSRBIG00000034951 #16	ENSRBIG00000006980 ##17	ELOA2 (ENSRBIG00000033712) #17	KATNAL2 (ENSRBIG00000040316) #21	PIAS2 (ENSRBIG00000038220) #22	ST8SIA5 (ENSRBIG00000030321) #23	LOXHD1 (ENSRBIG00000042735) #24	RNF165 (ENSRBIG00000023642) #25	C18orf25 (ENSRBIG00000030339)	HAUS1 (ENSRBIG00000035142) #26	ATP5F1A (ENSRBIG00000039573) #27	PSTPIP2 (ENSRBIG00000030324) #29	EPG5 (ENSRBIG00000034374) #30	SIGLEC15 (ENSRBIG00000032827) #31	SLC14A1 (ENSRBIG00000006426) #32	SLC14A2 (ENSRBIG00000044802) #33	SETBP1 (ENSRBIG00000031542) #34	ENSRBIG00000042956
Platyrrhini	ANCESTRAL SPECIES	26	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029.a #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Cebidae	ANCESTRAL SPECIES	28	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b	ENSGT00390000018741.ab	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741.`b.a	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167.g	ENSGT00390000006029.a #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Cebidae_a	ANCESTRAL SPECIES	23	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.e.b	ENSGT00390000018741.ab	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741.`b.a	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00940000154677.g.a.d	ENSGT00390000016167.g	ENSGT00390000006029.a #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Capuchin	MODERN SPECIES	60	LIPG (ENSCCAG00000023643)	RPL17 (ENSCCAG00000024026)	ENSCCAG00000023815	DYM (ENSCCAG00000032314)	ENSCCAG00000037376	SMAD7 (ENSCCAG00000033513)	CTIF (ENSCCAG00000022758) #7	ZBTB7C (ENSCCAG00000034868) #10	SMAD2 (ENSCCAG00000036243) #11	ENSCCAG00000037809	SKOR2 (ENSCCAG00000021025) #13	IER3IP1 (ENSCCAG00000036067) #15	HDHD2 (ENSCCAG00000022419) #16	KATNAL2 (ENSCCAG00000027056) #21	ENSCCAG00000033839 #17	PIAS2 (ENSCCAG00000022843) #22	ST8SIA5 (ENSCCAG00000023326) #23	LOXHD1 (ENSCCAG00000024237) #24	RNF165 (ENSCCAG00000015794) #25	ENSCCAG00000028369	C18orf25 (ENSCCAG00000013731)	HAUS1 (ENSCCAG00000026991) #26	ATP5F1A (ENSCCAG00000035404) #27	PSTPIP2 (ENSCCAG00000026201) #29	ENSCCAG00000033907	EPG5 (ENSCCAG00000019864) #30	SIGLEC15 (ENSCCAG00000029871) #31	SLC14A1 (ENSCCAG00000020737) #32	SLC14A2 (ENSCCAG00000022464) #33	SETBP1 (ENSCCAG00000024635) #34	ENSCCAG00000032254
Bolivian squirrel monkey	MODERN SPECIES	53																PIAS2 (ENSSBOG00000033248) #22	ENSSBOG00000032457	ST8SIA5 (ENSSBOG00000024606) #23	LOXHD1 (ENSSBOG00000027079) #24	RNF165 (ENSSBOG00000031789) #25	ENSSBOG00000030458	C18orf25 (ENSSBOG00000026230)	ENSSBOG00000027223 #26	ATP5F1A (ENSSBOG00000002379) #27	PSTPIP2 (ENSSBOG00000021234) #29	ENSSBOG00000033021	EPG5 (ENSSBOG00000021065) #30	SIGLEC15 (ENSSBOG00000022894) #31	SLC14A1 (ENSSBOG00000033512) #32	SLC14A2 (ENSSBOG00000022319) #33	SETBP1 (ENSSBOG00000025213) #34
Marmoset	MODERN SPECIES	4	ENSCJAG00000076436	DYM (ENSCJAG00000004754)	ENSCJAG00000060917	ENSCJAG00000067581	SMAD7 (ENSCJAG00000039611)	CTIF (ENSCJAG00000004729) #7	ZBTB7C (ENSCJAG00000004704) #10	ENSCJAG00000081448	SMAD2 (ENSCJAG00000004630) #11	ENSCJAG00000071063	SKOR2 (ENSCJAG00000048253) #13	IER3IP1 (ENSCJAG00000072341) #15	HDHD2 (ENSCJAG00000004578) #16	ENSCJAG00000060346	KATNAL2 (ENSCJAG00000008107) #21	PIAS2 (ENSCJAG00000008199) #22	ST8SIA5 (ENSCJAG00000081047) #23	LOXHD1 (ENSCJAG00000008221) #24	RNF165 (ENSCJAG00000073766) #25	ENSCJAG00000075854	C18orf25 (ENSCJAG00000008285)	ENSCJAG00000079309	HAUS1 (ENSCJAG00000008303) #26	ENSCJAG00000008319 #27	SIGLEC15 (ENSCJAG00000008603) #31	EPG5 (ENSCJAG00000008484) #30	ENSCJAG00000048632 #32	SLC14A2 (ENSCJAG00000004051) #33	SETBP1 (ENSCJAG00000004035) #34	ENSCJAG00000082171	SYT4 (ENSCJAG00000004002) #35
Mas night monkey	MODERN SPECIES	426	LIPG (ENSANAG00000020805)	ENSANAG00000038237	ENSANAG00000032933	DYM (ENSANAG00000029190)	SMAD7 (ENSANAG00000028079)	CTIF (ENSANAG00000024925) #7	ZBTB7C (ENSANAG00000033116) #10	SMAD2 (ENSANAG00000031458) #11	ENSANAG00000030706	SKOR2 (ENSANAG00000030804) #13	IER3IP1 (ENSANAG00000023921) #15	ENSANAG00000023759	HDHD2 (ENSANAG00000036024) #16	KATNAL2 (ENSANAG00000030359) #21	ENSANAG00000027601	PIAS2 (ENSANAG00000036127) #22	ST8SIA5 (ENSANAG00000020554) #23	LOXHD1 (ENSANAG00000026289) #24	RNF165 (ENSANAG00000032671) #25	C18orf25 (ENSANAG00000015359)	ENSANAG00000034812 #26	ATP5F1A (ENSANAG00000020684) #27	ENSANAG00000036960	ENSANAG00000026020 ##28	PSTPIP2 (ENSANAG00000033626) #29	EPG5 (ENSANAG00000028542) #30	SIGLEC15 (ENSANAG00000020739) #31	SLC14A1 (ENSANAG00000035909) #32	SLC14A2 (ENSANAG00000024503) #33	SETBP1 (ENSANAG00000026892) #34	SYT4 (ENSANAG00000028853) #35
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	4783																ENSTSYG00000000026 #22	ST8SIA5 (ENSTSYG00000035138) #23	LOXHD1 (ENSTSYG00000033259) #24	RNF165 (ENSTSYG00000012781) #25
Tarsier	MODERN SPECIES	4223																ENSTSYG00000032952 #22	ENSTSYG00000029241
Strepsirrhini	ANCESTRAL SPECIES	22	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741.s	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Lemuriformes	ANCESTRAL SPECIES	25	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741.s	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Mouse lemur	MODERN SPECIES	10	CFAP53 (ENSMICG00000006410)	MYO5B (ENSMICG00000005287)	ACAA2 (ENSMICG00000005278)	LIPG (ENSMICG00000017104)	ENSMICG00000017102	C18orf32 (ENSMICG00000042525)	DYM (ENSMICG00000017535)	SMAD7 (ENSMICG00000034183)	CTIF (ENSMICG00000010167) #7	ZBTB7C (ENSMICG00000038331) #10	SMAD2 (ENSMICG00000007882) #11	SKOR2 (ENSMICG00000031129) #13	IER3IP1 (ENSMICG00000043887) #15	HDHD2 (ENSMICG00000042121) #16	KATNAL2 (ENSMICG00000007857) #21	PIAS2 (ENSMICG00000013229) #22	ST8SIA5 (ENSMICG00000013224) #23	ENSMICG00000017500 #27	LOXHD1 (ENSMICG00000001316) #24	RNF165 (ENSMICG00000011741) #25	C18orf25 (ENSMICG00000004834)	HAUS1 (ENSMICG00000017501) #26	ENSMICG00000028901 #27	PSTPIP2 (ENSMICG00000017499) #29	EPG5 (ENSMICG00000017498) #30	SIGLEC15 (ENSMICG00000017497) #31	SLC14A1 (ENSMICG00000017496) #32	SLC14A2 (ENSMICG00000017495) #33	SETBP1 (ENSMICG00000017494) #34	SYT4 (ENSMICG00000027289) #35	RIT2 (ENSMICG00000006203) #36
Lemuriformes_a	ANCESTRAL SPECIES	62	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741.s	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Coquerels sifaka	MODERN SPECIES	262			ACAA2 (ENSPCOG00000021233)	LIPG (ENSPCOG00000017489)	ENSPCOG00000024759	C18orf32 (ENSPCOG00000028796)	DYM (ENSPCOG00000010198)	SMAD7 (ENSPCOG00000003237)	CTIF (ENSPCOG00000013391) #7	ZBTB7C (ENSPCOG00000019918) #10	SMAD2 (ENSPCOG00000000934) #11	SKOR2 (ENSPCOG00000016973) #13	IER3IP1 (ENSPCOG00000000443) #15	HDHD2 (ENSPCOG00000024401) #16	KATNAL2 (ENSPCOG00000013440) #21	PIAS2 (ENSPCOG00000028397) #22	ST8SIA5 (ENSPCOG00000021186) #23	LOXHD1 (ENSPCOG00000027350) #24	RNF165 (ENSPCOG00000017842) #25	C18orf25 (ENSPCOG00000026561)	HAUS1 (ENSPCOG00000024124) #26	ATP5F1A (ENSPCOG00000017027) #27	PSTPIP2 (ENSPCOG00000021273) #29	EPG5 (ENSPCOG00000026516) #30	SIGLEC15 (ENSPCOG00000026160) #31	SLC14A1 (ENSPCOG00000027560) #32	SLC14A2 (ENSPCOG00000003875) #33	SETBP1 (ENSPCOG00000022384) #34
Greater bamboo lemur	MODERN SPECIES	606	MYO5B (ENSPSMG00000019098)	ACAA2 (ENSPSMG00000018945)	LIPG (ENSPSMG00000018901)	ENSPSMG00000018857	ENSPSMG00000018846	DYM (ENSPSMG00000018799)	SMAD7 (ENSPSMG00000018729)	CTIF (ENSPSMG00000018691) #7	ZBTB7C (ENSPSMG00000018657) #10	SMAD2 (ENSPSMG00000018402) #11	SKOR2 (ENSPSMG00000018268) #13	ENSPSMG00000018261 #15	HDHD2 (ENSPSMG00000018254) #16	ENSPSMG00000018244 #17	KATNAL2 (ENSPSMG00000018239) #21	PIAS2 (ENSPSMG00000018197) #22	ST8SIA5 (ENSPSMG00000018127) #23
Bushbaby	MODERN SPECIES	127	MBD1 (ENSOGAG00000003784)	ENSOGAG00000003781	MYO5B (ENSOGAG00000016529)	ACAA2 (ENSOGAG00000016527)	LIPG (ENSOGAG00000016524)	ENSOGAG00000029213	DYM (ENSOGAG00000013935)	SMAD7 (ENSOGAG00000013932)	CTIF (ENSOGAG00000013927) #7	ZBTB7C (ENSOGAG00000000444) #10	SMAD2 (ENSOGAG00000000443) #11	SKOR2 (ENSOGAG00000032696) #13	IER3IP1 (ENSOGAG00000016626) #15	HDHD2 (ENSOGAG00000016619) #16	KATNAL2 (ENSOGAG00000016612) #21	PIAS2 (ENSOGAG00000012636) #22	ST8SIA5 (ENSOGAG00000012633) #23	LOXHD1 (ENSOGAG00000012621) #24	RNF165 (ENSOGAG00000025147) #25	C18orf25 (ENSOGAG00000005093)	HAUS1 (ENSOGAG00000005096) #26	ENSOGAG00000026684 #27	PSTPIP2 (ENSOGAG00000007141) #29	ENSOGAG00000029113 #30	SIGLEC15 (ENSOGAG00000024686) #31	SLC14A1 (ENSOGAG00000016407) #32	SLC14A2 (ENSOGAG00000016395) #33	SETBP1 (ENSOGAG00000010412) #34	ENSOGAG00000029062	SYT4 (ENSOGAG00000003595) #35	RIT2 (ENSOGAG00000002055) #36
Euarchontoglires_A	ANCESTRAL SPECIES	22	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Tree shrew	MODERN SPECIES	1407																ENSTBEG00000014666 #22	ST8SIA5 (ENSTBEG00000014559) #23
Glires	ANCESTRAL SPECIES	23	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Lagomorpha	ANCESTRAL SPECIES	29	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.a.a.a.b.k	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Rabbit	MODERN SPECIES	20	ENSOCUG00000012485	ENSOCUG00000027094	ENSOCUG00000038051	DYM (ENSOCUG00000015851)	SMAD7 (ENSOCUG00000024309)	CTIF (ENSOCUG00000024842) #7	ENSOCUG00000026631	ZBTB7C (ENSOCUG00000022348) #10	SMAD2 (ENSOCUG00000011290) #11	ENSOCUG00000027573 #13	IER3IP1 (ENSOCUG00000012555) #15	HDHD2 (ENSOCUG00000006979) #16	ENSOCUG00000035984 #17	ENSOCUG00000006940 #17	KATNAL2 (ENSOCUG00000006971) #21	PIAS2 (ENSOCUG00000006900) #22	ENSOCUG00000033989 #24	RNF165 (ENSOCUG00000011801) #25	C18orf25 (ENSOCUG00000009573)	HAUS1 (ENSOCUG00000017483) #26	ENSOCUG00000003967 #27	PSTPIP2 (ENSOCUG00000000324) #29	EPG5 (ENSOCUG00000003950) #30	SIGLEC15 (ENSOCUG00000023340) #31	SLC14A1 (ENSOCUG00000006758) #32	ENSOCUG00000006749 #33	SETBP1 (ENSOCUG00000009706) #34	SYT4 (ENSOCUG00000009669) #35	RIT2 (ENSOCUG00000003652) #36	PIK3C3 (ENSOCUG00000009451) #37	ENSOCUG00000039403
Pika	MODERN SPECIES	4011																ENSOPRG00000006243 #22
Rodentia	ANCESTRAL SPECIES	23	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Rodentia_A	ANCESTRAL SPECIES	23	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Hystricomorpha	ANCESTRAL SPECIES	32	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029.q #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Hystricomorpha_a	ANCESTRAL SPECIES	26	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029.q #26	ENSGT00390000006029.p #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Guinea pig	DUPLICATION
Guinea pig	MODERN SPECIES	14	CFAP53 (ENSCPOG00000001668)	MYO5B (ENSCPOG00000014213)	ACAA2 (ENSCPOG00000004734)	LIPG (ENSCPOG00000008890)	ENSCPOG00000019337	C18orf32 (ENSCPOG00000034745)	DYM (ENSCPOG00000013484)	SMAD7 (ENSCPOG00000030295)	CTIF (ENSCPOG00000001049) #7	ZBTB7C (ENSCPOG00000040464) #10	SMAD2 (ENSCPOG00000013398) #11	SKOR2 (ENSCPOG00000021920) #13	IER3IP1 (ENSCPOG00000040200) #15	HDHD2 (ENSCPOG00000030325) #16	KATNAL2 (ENSCPOG00000008150) #21	ENSCPOG00000003067 #22	ST8SIA5 (ENSCPOG00000030161) #23	LOXHD1 (ENSCPOG00000009824) #24	RNF165 (ENSCPOG00000009298) #25	HAUS1 (ENSCPOG00000012723) #26	ATP5F1A (ENSCPOG00000012719) #27	PSTPIP2 (ENSCPOG00000004876) #29	EPG5 (ENSCPOG00000012114) #30	SLC14A1 (ENSCPOG00000007979) #32	ENSCPOG00000007976 #33	SETBP1 (ENSCPOG00000011164) #34	SYT4 (ENSCPOG00000009941) #35	RIT2 (ENSCPOG00000009357) #36	PIK3C3 (ENSCPOG00000004375) #37	ENSCPOG00000040621	CELF4 (ENSCPOG00000035956)
Guinea pig	MODERN SPECIES		HACL1 (ENSCPOG00000024203)	COLQ (ENSCPOG00000002476)	EAF1 (ENSCPOG00000031143)	METTL6 (ENSCPOG00000037082)	ABHD6 (ENSCPOG00000037337)	RPP14 (ENSCPOG00000004281)	HTD2 (ENSCPOG00000036094)	PXK (ENSCPOG00000006707)	PDHB (ENSCPOG00000006713)	KCTD6 (ENSCPOG00000006719)	ACOX2 (ENSCPOG00000006721)	FAM107A (ENSCPOG00000014689)	FAM3D (ENSCPOG00000014686)	CFAP20DC (ENSCPOG00000010572)	FHIT (ENSCPOG00000014924)	ENSCPOG00000032909 #22	PTPRG (ENSCPOG00000003197)	C3orf14 (ENSCPOG00000006026)	FEZF2 (ENSCPOG00000001697)	ENSCPOG00000001699	SYNPR (ENSCPOG00000012817)	SNTN (ENSCPOG00000012821)	ENSCPOG00000021409	THOC7 (ENSCPOG00000007930)	ATXN7 (ENSCPOG00000002924)	PSMD6 (ENSCPOG00000006160)	PRICKLE2 (ENSCPOG00000031153)	ADAMTS9 (ENSCPOG00000004877)	MAGI1 (ENSCPOG00000002169)	ENSCPOG00000013562	DYNC1LI1 (ENSCPOG00000011613)
Hystricomorpha_b	ANCESTRAL SPECIES	21	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029.q #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Long-tailed chinchilla	DUPLICATION
Long-tailed chinchilla	MODERN SPECIES	109	ENSCLAG00000008597	ENSCLAG00000007196	LIPG (ENSCLAG00000011863)	ENSCLAG00000010369	ENSCLAG00000008914	C18orf32 (ENSCLAG00000008711)	DYM (ENSCLAG00000008080)	SMAD7 (ENSCLAG00000007063)	CTIF (ENSCLAG00000008174) #7	ZBTB7C (ENSCLAG00000012082) #10	SMAD2 (ENSCLAG00000011258) #11	SKOR2 (ENSCLAG00000012544) #13	IER3IP1 (ENSCLAG00000007652) #15	HDHD2 (ENSCLAG00000006391) #16	KATNAL2 (ENSCLAG00000013657) #21	ENSCLAG00000011621 #22	ST8SIA5 (ENSCLAG00000012639) #23	LOXHD1 (ENSCLAG00000011718) #24	RNF165 (ENSCLAG00000009534) #25	C18orf25 (ENSCLAG00000008611)	HAUS1 (ENSCLAG00000012155) #26	ATP5F1A (ENSCLAG00000014431) #27	ENSCLAG00000015055	PSTPIP2 (ENSCLAG00000011006) #29	EPG5 (ENSCLAG00000009230) #30	SIGLEC15 (ENSCLAG00000007394) #31	SLC14A1 (ENSCLAG00000007299) #32	SLC14A2 (ENSCLAG00000012015) #33	SETBP1 (ENSCLAG00000010509) #34	ENSCLAG00000008619	SYT4 (ENSCLAG00000008440) #35
Long-tailed chinchilla	MODERN SPECIES	127	SEC22C (ENSCLAG00000016050)	VIPR1 (ENSCLAG00000016513)	LYZL4 (ENSCLAG00000016944)	CCK (ENSCLAG00000017113)	TRAK1 (ENSCLAG00000014205)	ULK4 (ENSCLAG00000015979)	CTNNB1 (ENSCLAG00000016464)	ZNF621 (ENSCLAG00000016834)	RPL14 (ENSCLAG00000016120)	ENTPD3 (ENSCLAG00000016343)	EIF1B (ENSCLAG00000016040)	MYRIP (ENSCLAG00000016112)	ENSCLAG00000014655	ENSCLAG00000015318	SLC25A38 (ENSCLAG00000015393)	ENSCLAG00000016657 #22
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	44	ENSODEG00000018393	DYM (ENSODEG00000018486)	SMAD7 (ENSODEG00000018424)	CTIF (ENSODEG00000018390) #7	ZBTB7C (ENSODEG00000018417) #10	SMAD2 (ENSODEG00000018373) #11	ENSODEG00000018377	ENSODEG00000018340	ENSODEG00000018367	SKOR2 (ENSODEG00000018363) #13	IER3IP1 (ENSODEG00000018375) #15	HDHD2 (ENSODEG00000018388) #16	KATNAL2 (ENSODEG00000018481) #21	ENSODEG00000018457	ENSODEG00000020536	ENSODEG00000018432 #22	ST8SIA5 (ENSODEG00000018352) #23	ENSODEG00000020498	LOXHD1 (ENSODEG00000018482) #24	RNF165 (ENSODEG00000018412) #25	C18orf25 (ENSODEG00000018458)	ENSODEG00000018366 #26	ATP5F1A (ENSODEG00000018359) #27	ENSODEG00000020534	ENSODEG00000018334	PSTPIP2 (ENSODEG00000018461) #29	EPG5 (ENSODEG00000018404) #30	SIGLEC15 (ENSODEG00000018459) #31	SLC14A1 (ENSODEG00000018379) #32	SLC14A2 (ENSODEG00000018353) #33	SETBP1 (ENSODEG00000018419) #34
Degu	MODERN SPECIES	65	ENSODEG00000006806	MTFR2 (ENSODEG00000006976)	PDE7B (ENSODEG00000007023)	ENSODEG00000007137	ENSODEG00000006953	ENSODEG00000019597	ENSODEG00000008684	HBS1L (ENSODEG00000008959)	ALDH8A1 (ENSODEG00000007514)	ENSODEG00000006585	SLC2A12 (ENSODEG00000007816)	ENSODEG00000006582	TCF21 (ENSODEG00000007820)	ENSODEG00000019436	FNDC1 (ENSODEG00000007591)	ENSODEG00000009689 #22	TAGAP (ENSODEG00000007094)	RSPH3 (ENSODEG00000006702)	ENSODEG00000007168	ENSODEG00000006754	ENSODEG00000009659	SYTL3 (ENSODEG00000007102)	ENSODEG00000007702	ENSODEG00000007461	TULP4 (ENSODEG00000007452)	ENSODEG00000019398	ENSODEG00000008981	SERAC1 (ENSODEG00000008208)	SYNJ2 (ENSODEG00000007709)	SNX9 (ENSODEG00000005916)	ENSODEG00000019604
Degu	MODERN SPECIES	185	ENSODEG00000004409	ENSODEG00000004390	ENSODEG00000004382	ENSODEG00000004245	NRP1 (ENSODEG00000004113)	PARD3 (ENSODEG00000004622)	ENSODEG00000004486	ENSODEG00000004461	ENSODEG00000004444	ENSODEG00000004428	ENSODEG00000004400	MPP7 (ENSODEG00000004278)	ODAD2 (ENSODEG00000004199)	MKX (ENSODEG00000004159)	ENSODEG00000004150	ENSODEG00000004139 #22
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	31	ENSHGLG00000002579	ENSHGLG00000002181	ENSHGLG00000002863	ENSHGLG00000035843	ENSHGLG00000046679	ENSHGLG00000001046	ENSHGLG00000000969	UXT (ENSHGLG00000000945)	ELK1 (ENSHGLG00000000926)	CFP (ENSHGLG00000000905)	TIMP1 (ENSHGLG00000000794)	SYN1 (ENSHGLG00000000779)	ENSHGLG00000000754	ENSHGLG00000043935	ZNF41 (ENSHGLG00000049389)	ENSHGLG00000046479 #22	ENSHGLG00000001450	ENSHGLG00000045718	ENSHGLG00000044888	USP11 (ENSHGLG00000001371)	CDK16 (ENSHGLG00000001209)	UBA1 (ENSHGLG00000000529)	RBM10 (ENSHGLG00000000890)	Ndufb11 (ENSHGLG00000045173)	Rgn (ENSHGLG00000000674)	ENSHGLG00000000616	RP2 (ENSHGLG00000047413)	ENSHGLG00000020120	SLC9A7 (ENSHGLG00000007119)	CHST7 (ENSHGLG00000006779)	ENSHGLG00000045686
Naked mole-rat female	MODERN SPECIES	9	LIPG (ENSHGLG00000010224)	ENSHGLG00000047452	ENSHGLG00000036153	ENSHGLG00000009081	ENSHGLG00000015030	ENSHGLG00000040505	ENSHGLG00000048272	ENSHGLG00000042101	ENSHGLG00000031912	SMAD2 (ENSHGLG00000008711) #11	SKOR2 (ENSHGLG00000035792) #13	ENSHGLG00000048898 #15	HDHD2 (ENSHGLG00000010130) #16	ENSHGLG00000034217 #21	ENSHGLG00000040167	PIAS2 (ENSHGLG00000015588) #22	ST8SIA5 (ENSHGLG00000040367) #23	ENSHGLG00000006211 #24	RNF165 (ENSHGLG00000035767) #25	C18orf25 (ENSHGLG00000041108)	ENSHGLG00000036445 #27	ENSHGLG00000036850 #26	ENSHGLG00000009522 #27	PSTPIP2 (ENSHGLG00000005740) #29	SLC14A1 (ENSHGLG00000007316) #32	ENSHGLG00000005880 #33	ENSHGLG00000046959 #33	ENSHGLG00000033588	ENSHGLG00000040364 #34	ENSHGLG00000001864	ENSHGLG00000041163
Sciuridae	ANCESTRAL SPECIES	31	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.z #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Marmotini	ANCESTRAL SPECIES	31	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT01030000236530	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.z #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Marmotini_b	ANCESTRAL SPECIES	137																ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.z #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Arctic ground squirrel	MODERN SPECIES	622																PIAS2 (ENSUPAG00010010887) #22	ST8SIA5 (ENSUPAG00010010865) #23	LOXHD1 (ENSUPAG00010010785) #24	ENSUPAG00010010781 #25	ENSUPAG00010010778	C18orf25 (ENSUPAG00010010766)	ENSUPAG00010010762	ENSUPAG00010010754 #26	ATP5F1A (ENSUPAG00010010740) #27
Squirrel	MODERN SPECIES	117																PIAS2 (ENSSTOG00000014612) #22	ST8SIA5 (ENSSTOG00000027926) #23	LOXHD1 (ENSSTOG00000023476) #24	RNF165 (ENSSTOG00000023324) #25	C18orf25 (ENSSTOG00000006376)	HAUS1 (ENSSTOG00000003708) #26	ATP5F1A (ENSSTOG00000003680) #27	PSTPIP2 (ENSSTOG00000003652) #29	EPG5 (ENSSTOG00000021864) #30	SIGLEC15 (ENSSTOG00000002555) #31	SLC14A1 (ENSSTOG00000002535) #32	SLC14A2 (ENSSTOG00000002511) #33	SETBP1 (ENSSTOG00000002563) #34	SYT4 (ENSSTOG00000009215) #35	RIT2 (ENSSTOG00000027357) #36	PIK3C3 (ENSSTOG00000013565) #37
Alpin marmot	MODERN SPECIES	10	MBD1 (ENSMMMG00000005802)	CFAP53 (ENSMMMG00000005890)	MYO5B (ENSMMMG00000005915)	ACAA2 (ENSMMMG00000006091)	LIPG (ENSMMMG00000006111)	ENSMMMG00000006135	C18orf32 (ENSMMMG00000006157)	DYM (ENSMMMG00000006170)	SMAD7 (ENSMMMG00000006202)	CTIF (ENSMMMG00000006232) #7	ZBTB7C (ENSMMMG00000006278) #10	SMAD2 (ENSMMMG00000006290) #11	ENSMMMG00000006338	HDHD2 (ENSMMMG00000006342) #16	KATNAL2 (ENSMMMG00000006351) #21	PIAS2 (ENSMMMG00000006515) #22	ST8SIA5 (ENSMMMG00000006633) #23	LOXHD1 (ENSMMMG00000006669) #24	RNF165 (ENSMMMG00000006757) #25	C18orf25 (ENSMMMG00000006777)	HAUS1 (ENSMMMG00000006810) #26	ATP5F1A (ENSMMMG00000006823) #27	PSTPIP2 (ENSMMMG00000006839) #29	EPG5 (ENSMMMG00000006854) #30	SIGLEC15 (ENSMMMG00000006905) #31	SLC14A1 (ENSMMMG00000006914) #32	SLC14A2 (ENSMMMG00000006939) #33	SETBP1 (ENSMMMG00000006996) #34	SYT4 (ENSMMMG00000007022) #35	RIT2 (ENSMMMG00000007046) #36	ENSMMMG00000007059
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	4	MYO5B (ENSSVLG00005020740)	ACAA2 (ENSSVLG00005020577)	LIPG (ENSSVLG00005020493)	ENSSVLG00005020364	ENSSVLG00005020326	DYM (ENSSVLG00005019977)	SMAD7 (ENSSVLG00005019787)	CTIF (ENSSVLG00005019619) #7	ZBTB7C (ENSSVLG00005019433) #10	ENSSVLG00005019379 #11	SKOR2 (ENSSVLG00005019180) #13	ENSSVLG00005019150 #15	HDHD2 (ENSSVLG00005019073) #16	ENSSVLG00005019019 #17	KATNAL2 (ENSSVLG00005018737) #21	ENSSVLG00005018588 #22	ST8SIA5 (ENSSVLG00005018346) #23	LOXHD1 (ENSSVLG00005016724) #24	RNF165 (ENSSVLG00005016476) #25	C18orf25 (ENSSVLG00005016394)	HAUS1 (ENSSVLG00005016339) #26	ATP5F1A (ENSSVLG00005016277) #27	ENSSVLG00005016239	PSTPIP2 (ENSSVLG00005016011) #29	EPG5 (ENSSVLG00005015968) #30	SIGLEC15 (ENSSVLG00005015863) #31	SLC14A1 (ENSSVLG00005015590) #32	ENSSVLG00005015418 #33	SETBP1 (ENSSVLG00005015356) #34	ENSSVLG00005015263	SYT4 (ENSSVLG00005021147) #35
Eurasian red squirrel	MODERN SPECIES	5	ENSSVLG00005021117	ENSSVLG00005021181	ENSSVLG00005021214	ENSSVLG00005021258	ENSSVLG00005021298	ENSSVLG00005021318	ENSSVLG00005021345	ENSSVLG00005021372	ENSSVLG00005021434	ENSSVLG00005021520	ENSSVLG00005021533	ENSSVLG00005021576	ENSSVLG00005021600	ENSSVLG00005021630	ENSSVLG00005021725	ENSSVLG00005021847 #22	ENSSVLG00005021855	ENSSVLG00005021866	ENSSVLG00005021916	ENSSVLG00005021930	ENSSVLG00005021944	ENSSVLG00005021980	ENSSVLG00005022012	ENSSVLG00005022087	ENSSVLG00005022131	ENSSVLG00005022162	ENSSVLG00005022225	ENSSVLG00005022258	ENSSVLG00005022282	ENSSVLG00005022318	ENSSVLG00005022349
Rodentia_B	ANCESTRAL SPECIES	27	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Kangaroo rat	MODERN SPECIES	344																Pias2 (ENSDORG00000013246) #22	St8sia5 (ENSDORG00000014254) #23	ENSDORG00000014253 #24	Rnf165 (ENSDORG00000008058) #25	8030462N17Rik (ENSDORG00000004172)	Haus1 (ENSDORG00000023830) #26	Atp5a1 (ENSDORG00000009630) #27	Pstpip2 (ENSDORG00000003911) #29	Epg5 (ENSDORG00000013620) #30	ENSDORG00000013618	Slc14a1 (ENSDORG00000014939) #32	ENSDORG00000014932 #33	Setbp1 (ENSDORG00000006424) #34	Syt4 (ENSDORG00000012271) #35	Rit2 (ENSDORG00000009400) #36	Pik3c3 (ENSDORG00000014804) #37
Myomorpha	ANCESTRAL SPECIES	35	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	60	BC031181 (ENSJJAG00000013965)	Dym (ENSJJAG00000000543)	ENSJJAG00000011899	ENSJJAG00000014372	ENSJJAG00000011224	Smad7 (ENSJJAG00000017342)	Ctif (ENSJJAG00000013706) #7	ENSJJAG00000000639	Zbtb7c (ENSJJAG00000005484) #10	ENSJJAG00000000783	Smad2 (ENSJJAG00000021902) #11	Skor2 (ENSJJAG00000013235) #13	ENSJJAG00000009768 #15	Hdhd2 (ENSJJAG00000020515) #16	Katnal2 (ENSJJAG00000013360) #21	ENSJJAG00000021561 #22	St8sia5 (ENSJJAG00000023613) #23	Loxhd1 (ENSJJAG00000012049) #24	Rnf165 (ENSJJAG00000014596) #25	8030462N17Rik (ENSJJAG00000015948)	ENSJJAG00000014908 #26	ENSJJAG00000022136 #27	Pstpip2 (ENSJJAG00000011600) #29	Epg5 (ENSJJAG00000008036) #30	Siglec15 (ENSJJAG00000011775) #31	Slc14a1 (ENSJJAG00000009670) #32	ENSJJAG00000021572 #33	Setbp1 (ENSJJAG00000004320) #34	ENSJJAG00000000736	Mc2r (ENSJJAG00000000906)	Mc5r (ENSJJAG00000012730)
Lesser Egyptian jerboa	MODERN SPECIES	66	ENSJJAG00000019056	Ccdc171 (ENSJJAG00000020916)	ENSJJAG00000015360	Snapc3 (ENSJJAG00000018408)	Ttc39b (ENSJJAG00000004238)	ENSJJAG00000010564	ENSJJAG00000015519	Cer1 (ENSJJAG00000023511)	Zdhhc21 (ENSJJAG00000002851)	Nfib (ENSJJAG00000013052)	ENSJJAG00000010432	Mpdz (ENSJJAG00000012097)	Lurap1l (ENSJJAG00000014520)	Tyrp1 (ENSJJAG00000015009)	ENSJJAG00000010326	ENSJJAG00000023453 #22
Muroidea	ANCESTRAL SPECIES	13	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368
Upper Galilee mountains blind mole rat	MODERN SPECIES	1888						Dym (ENSNGAG00000020852)	ENSNGAG00000001549	Smad7 (ENSNGAG00000004962)	Ctif (ENSNGAG00000011452) #7	Zbtb7c (ENSNGAG00000012022) #10	Smad2 (ENSNGAG00000013343) #11	Skor2 (ENSNGAG00000018430) #13	ENSNGAG00000020722 #15	Hdhd2 (ENSNGAG00000000250) #16	Katnal2 (ENSNGAG00000010954) #21	Pias2 (ENSNGAG00000010511) #22	St8sia5 (ENSNGAG00000017269) #23	Loxhd1 (ENSNGAG00000020158) #24	Rnf165 (ENSNGAG00000012965) #25	8030462N17Rik (ENSNGAG00000014428)	Haus1 (ENSNGAG00000001553) #26	Atp5a1 (ENSNGAG00000009807) #27	Pstpip2 (ENSNGAG00000018122) #29	Epg5 (ENSNGAG00000005612) #30	Siglec15 (ENSNGAG00000013867) #31	Slc14a1 (ENSNGAG00000014056) #32	ENSNGAG00000015050 #33	Setbp1 (ENSNGAG00000016368) #34	Mc2r (ENSNGAG00000014364)	Mc5r (ENSNGAG00000008073)	Rnmt (ENSNGAG00000014958)
Muroidea_A	ANCESTRAL SPECIES	18	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00950000183211.a.b	ENSGT00530000063631.a	ENSGT00390000011362
Cricetidae	ANCESTRAL SPECIES	18	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.u #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a.e #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00950000183211.a.b	ENSGT00530000063631.a	ENSGT00390000011362
Cricetinae	ANCESTRAL SPECIES	14	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.u #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a.e #32	ENSGT00390000018729.a.b #33
Chinese hamster chok1gshd	MODERN SPECIES	314											Zbtb7c (ENSCGRG00001005320) #10	Smad2 (ENSCGRG00001006348) #11	Skor2 (ENSCGRG00001007925) #13	Hdhd2 (ENSCGRG00001009445) #16	Katnal2 (ENSCGRG00001010923) #21	Pias2 (ENSCGRG00001023617) #22	St8sia5 (ENSCGRG00001004611) #23	Loxhd1 (ENSCGRG00001009440) #24	Rnf165 (ENSCGRG00001011050) #25	8030462N17Rik (ENSCGRG00001011465)	Haus1 (ENSCGRG00001012089) #26	Atp5a1 (ENSCGRG00001012335) #27	Pstpip2 (ENSCGRG00001012933) #29	Epg5 (ENSCGRG00001013764) #30	Siglec15 (ENSCGRG00001014278) #31	ENSCGRG00001014534	Slc14a1 (ENSCGRG00001014682) #32	Slc14a2 (ENSCGRG00001015350) #33	ENSCGRG00001002557	Setbp1 (ENSCGRG00001003049) #34	ENSCGRG00001005434
Golden Hamster	MODERN SPECIES	680	Myo5b (ENSMAUG00000000930)	Acaa2 (ENSMAUG00000018671)	Lipg (ENSMAUG00000000351)	Rpl17 (ENSMAUG00000015927)	BC031181 (ENSMAUG00000019483)	Dym (ENSMAUG00000017721)	ENSMAUG00000020878	Smad7 (ENSMAUG00000020326)	Ctif (ENSMAUG00000000656) #7	Zbtb7c (ENSMAUG00000000374) #10	Smad2 (ENSMAUG00000006737) #11	Skor2 (ENSMAUG00000016006) #13	ENSMAUG00000012040 #15	Hdhd2 (ENSMAUG00000019526) #16	Katnal2 (ENSMAUG00000019836) #21	Pias2 (ENSMAUG00000014565) #22	St8sia5 (ENSMAUG00000011966) #23	Loxhd1 (ENSMAUG00000010353) #24	Rnf165 (ENSMAUG00000017550) #25	8030462N17Rik (ENSMAUG00000006561)	Haus1 (ENSMAUG00000009723) #26	Atp5f1a (ENSMAUG00000019838) #27	Pstpip2 (ENSMAUG00000014774) #29	Epg5 (ENSMAUG00000019707) #30	Siglec15 (ENSMAUG00000000352) #31	Slc14a1 (ENSMAUG00000014121) #32	ENSMAUG00000018876 #33	ENSMAUG00000006240	ENSMAUG00000014437	Toporsl (ENSMAUG00000021881)	Or13c3 (ENSMAUG00000004828)
Cricetidae_B	ANCESTRAL SPECIES	15	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.u #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a.e #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00950000183211.a.b	ENSGT00530000063631.a	ENSGT00390000011362
Northern American deer mouse	MODERN SPECIES	10	Myo5b (ENSPEMG00000020539)	Acaa2 (ENSPEMG00000022034)	ENSPEMG00000025726	ENSPEMG00000028900	Lipg (ENSPEMG00000021868)	Rpl17 (ENSPEMG00000001520)	Dym (ENSPEMG00000020826)	Smad7 (ENSPEMG00000021331)	Ctif (ENSPEMG00000022746) #7	Zbtb7c (ENSPEMG00000020629) #10	Smad2 (ENSPEMG00000020383) #11	Skor2 (ENSPEMG00000022190) #13	ENSPEMG00000026193 #15	Hdhd2 (ENSPEMG00000020912) #16	Katnal2 (ENSPEMG00000021096) #21	Pias2 (ENSPEMG00000022220) #22	St8sia5 (ENSPEMG00000022119) #23	Loxhd1 (ENSPEMG00000022919) #24	ENSPEMG00000029031 #25	8030462N17Rik (ENSPEMG00000010341)	Haus1 (ENSPEMG00000021388) #26	Atp5a1 (ENSPEMG00000022004) #27	Pstpip2 (ENSPEMG00000022379) #29	Epg5 (ENSPEMG00000022153) #30	Siglec15 (ENSPEMG00000024146) #31	ENSPEMG00000028869	Slc14a1 (ENSPEMG00000008835) #32	ENSPEMG00000022112 #33	Setbp1 (ENSPEMG00000021869) #34	ENSPEMG00000006471	Pard6g (ENSPEMG00000025457)
Prairie vole	MODERN SPECIES	5	ENSMOCG00000008152	Myo5b (ENSMOCG00000022368)	Acaa2 (ENSMOCG00000004236)	Lipg (ENSMOCG00000020738)	Rpl17 (ENSMOCG00000012741)	BC031181 (ENSMOCG00000012446)	Dym (ENSMOCG00000022593)	Smad7 (ENSMOCG00000001269)	Ctif (ENSMOCG00000020507) #7	Zbtb7c (ENSMOCG00000017640) #10	Smad2 (ENSMOCG00000017648) #11	Skor2 (ENSMOCG00000018264) #13	ENSMOCG00000009073 #15	Hdhd2 (ENSMOCG00000008063) #16	Katnal2 (ENSMOCG00000011716) #21	Pias2 (ENSMOCG00000015605) #22	St8sia5 (ENSMOCG00000011361) #23	Loxhd1 (ENSMOCG00000016732) #24	ENSMOCG00000019837 #25	8030462N17Rik (ENSMOCG00000000844)	Haus1 (ENSMOCG00000011366) #26	Atp5a1 (ENSMOCG00000009175) #27	Pstpip2 (ENSMOCG00000006361) #29	Epg5 (ENSMOCG00000015567) #30	Siglec15 (ENSMOCG00000007709) #31	ENSMOCG00000002421 #32	Slc14a2 (ENSMOCG00000013965) #33	Setbp1 (ENSMOCG00000021557) #34	Pard6g (ENSMOCG00000019881)	ENSMOCG00000019582	Rbfa (ENSMOCG00000018963)
Murinae	ANCESTRAL SPECIES	17	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00950000183211.a.b	ENSGT00530000063631.a	ENSGT00390000011362
Rat	MODERN SPECIES	9	Mbd1 (ENSRNOG00000024104)	Myo5b (ENSRNOG00000014104)	Acaa2 (ENSRNOG00000013766)	Lipg (ENSRNOG00000018694)	Slc25a6 (ENSRNOG00000042387)	Rpl17 (ENSRNOG00000018680)	Dym (ENSRNOG00000018425)	Smad7 (ENSRNOG00000018359)	Ctif (ENSRNOG00000018342) #7	ENSRNOG00000067472	Zbtb7c (ENSRNOG00000047924) #10	Smad2 (ENSRNOG00000018140) #11	Skor2 (ENSRNOG00000018006) #13	Ier3ip1 (ENSRNOG00000043171) #16	Katnal2 (ENSRNOG00000017788) #21	Pias2 (ENSRNOG00000017493) #22	St8sia5 (ENSRNOG00000022691) #23	Loxhd1 (ENSRNOG00000017410) #24	Rnf165 (ENSRNOG00000048824) #25	RGD1308601 (ENSRNOG00000017215)	ENSRNOG00000063575	Haus1 (ENSRNOG00000017067) #26	Atp5f1a (ENSRNOG00000017032) #27	Pstpip2 (ENSRNOG00000016987) #29	Epg5 (ENSRNOG00000052894) #30	Siglec15 (ENSRNOG00000033588) #31	Slc14a1 (ENSRNOG00000016753) #32	Slc14a2 (ENSRNOG00000061714) #33	Setbp1 (ENSRNOG00000016208) #34	ENSRNOG00000065450	Pard6g (ENSRNOG00000055157)
Mus	ANCESTRAL SPECIES	19	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648.c #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00950000183211.a.b	ENSGT00530000063631.a	ENSGT00390000011362
Shrew mouse	MODERN SPECIES	6	Cfap53 (MGP_PahariEiJ_G0019129)	Myo5b (MGP_PahariEiJ_G0019130)	Acaa2 (MGP_PahariEiJ_G0019131)	Lipg (MGP_PahariEiJ_G0019132)	Rpl17 (MGP_PahariEiJ_G0019133)	BC031181 (MGP_PahariEiJ_G0019134)	Dym (MGP_PahariEiJ_G0019135)	Smad7 (MGP_PahariEiJ_G0019136)	Ctif (MGP_PahariEiJ_G0019137) #7	Zbtb7c (MGP_PahariEiJ_G0019138) #10	Smad2 (MGP_PahariEiJ_G0019139) #11	Skor2 (MGP_PahariEiJ_G0019140) #13	MGP_PahariEiJ_G0019141 #15	Hdhd2 (MGP_PahariEiJ_G0019142) #16	Katnal2 (MGP_PahariEiJ_G0019143) #21	Pias2 (MGP_PahariEiJ_G0019144) #22	MGP_PahariEiJ_G0019145	St8sia5 (MGP_PahariEiJ_G0019146) #23	MGP_PahariEiJ_G0019147 #24	Rnf165 (MGP_PahariEiJ_G0019148) #25	8030462N17Rik (MGP_PahariEiJ_G0019149)	Haus1 (MGP_PahariEiJ_G0019150) #26	Atp5a1 (MGP_PahariEiJ_G0019151) #27	Pstpip2 (MGP_PahariEiJ_G0019152) #29	Epg5 (MGP_PahariEiJ_G0019153) #30	Siglec15 (MGP_PahariEiJ_G0019154) #31	Slc14a1 (MGP_PahariEiJ_G0019155) #32	Slc14a2 (MGP_PahariEiJ_G0019156) #33	MGP_PahariEiJ_G0019157	Setbp1 (MGP_PahariEiJ_G0019158) #34	Pard6g (MGP_PahariEiJ_G0019159)
Mus_A	ANCESTRAL SPECIES	19	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648.c #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00950000183211.a.b	ENSGT01100000265037	ENSGT00530000063631.a
Ryukyu mouse	MODERN SPECIES	9	Cfap53 (MGP_CAROLIEiJ_G0022400)	Myo5b (MGP_CAROLIEiJ_G0022401)	Acaa2 (MGP_CAROLIEiJ_G0022402)	Lipg (MGP_CAROLIEiJ_G0022403)	Rpl17 (MGP_CAROLIEiJ_G0022404)	BC031181 (MGP_CAROLIEiJ_G0022405)	Dym (MGP_CAROLIEiJ_G0022406)	Smad7 (MGP_CAROLIEiJ_G0022407)	Ctif (MGP_CAROLIEiJ_G0022408) #7	Zbtb7c (MGP_CAROLIEiJ_G0022409) #10	Smad2 (MGP_CAROLIEiJ_G0022410) #11	Skor2 (MGP_CAROLIEiJ_G0022411) #13	MGP_CAROLIEiJ_G0022412 #15	Hdhd2 (MGP_CAROLIEiJ_G0022413) #16	Katnal2 (MGP_CAROLIEiJ_G0022414) #21	Pias2 (MGP_CAROLIEiJ_G0022415) #22	MGP_CAROLIEiJ_G0022416	St8sia5 (MGP_CAROLIEiJ_G0022417) #23	Loxhd1 (MGP_CAROLIEiJ_G0022418) #24	Rnf165 (MGP_CAROLIEiJ_G0022419) #25	8030462N17Rik (MGP_CAROLIEiJ_G0022420)	Haus1 (MGP_CAROLIEiJ_G0022421) #26	Atp5a1 (MGP_CAROLIEiJ_G0022422) #27	Pstpip2 (MGP_CAROLIEiJ_G0022423) #29	MGP_CAROLIEiJ_G0022424 #30	Siglec15 (MGP_CAROLIEiJ_G0022425) #31	Slc14a1 (MGP_CAROLIEiJ_G0022426) #32	Slc14a2 (MGP_CAROLIEiJ_G0022427) #33	MGP_CAROLIEiJ_G0022428	Setbp1 (MGP_CAROLIEiJ_G0022429) #34	Pard6g (MGP_CAROLIEiJ_G0022430)
Mus_B	ANCESTRAL SPECIES	19	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648.c #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00950000183010.a.b.a.a.a.a.a.b.l.d	ENSGT00940000158784 #34	ENSGT00950000183211.a.b	ENSGT01100000265037
Mouse	MODERN SPECIES	9	Cfap53 (ENSMUSG00000035394)	Myo5b (ENSMUSG00000025885)	Acaa2 (ENSMUSG00000036880)	Lipg (ENSMUSG00000053846)	Rpl17 (ENSMUSG00000062328)	BC031181 (ENSMUSG00000036299)	Dym (ENSMUSG00000035765)	Smad7 (ENSMUSG00000025880)	Ctif (ENSMUSG00000052928) #7	Zbtb7c (ENSMUSG00000044646) #10	Smad2 (ENSMUSG00000024563) #11	Skor2 (ENSMUSG00000091519) #13	Ier3ip1 (ENSMUSG00000090000)	Hdhd2 (ENSMUSG00000025421) #16	Katnal2 (ENSMUSG00000025420) #21	Pias2 (ENSMUSG00000025423) #22	St8sia5 (ENSMUSG00000025425) #23	Loxhd1 (ENSMUSG00000032818) #24	Rnf165 (ENSMUSG00000025427) #25	8030462N17Rik (ENSMUSG00000047466)	Haus1 (ENSMUSG00000041840) #26	Atp5a1 (ENSMUSG00000025428) #27	Pstpip2 (ENSMUSG00000025429) #29	Epg5 (ENSMUSG00000039840) #30	Siglec15 (ENSMUSG00000091055) #31	Slc14a1 (ENSMUSG00000059336) #32	Slc14a2 (ENSMUSG00000024552) #33	Gm6133 (ENSMUSG00000090451)	Setbp1 (ENSMUSG00000024548) #34	Pard6g (ENSMUSG00000056214)	Adnp2 (ENSMUSG00000053950)
Mus_C	ANCESTRAL SPECIES	16	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648.c #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00950000183010.a.b.a.a.a.a.a.b.l.d	ENSGT00940000158784 #34	ENSGT00950000183211.a.b	ENSGT01100000265037
spretus	MODERN SPECIES	9	Cfap53 (MGP_SPRETEiJ_G0023313)	Myo5b (MGP_SPRETEiJ_G0023314)	Acaa2 (MGP_SPRETEiJ_G0023315)	Lipg (MGP_SPRETEiJ_G0023316)	MGP_SPRETEiJ_G0023317	BC031181 (MGP_SPRETEiJ_G0023318)	Dym (MGP_SPRETEiJ_G0023319)	Smad7 (MGP_SPRETEiJ_G0023320)	Ctif (MGP_SPRETEiJ_G0023321) #7	Zbtb7c (MGP_SPRETEiJ_G0023322) #10	Smad2 (MGP_SPRETEiJ_G0023323) #11	Skor2 (MGP_SPRETEiJ_G0023324) #13	MGP_SPRETEiJ_G0023325 #15	Hdhd2 (MGP_SPRETEiJ_G0023326) #16	Katnal2 (MGP_SPRETEiJ_G0023327) #21	Pias2 (MGP_SPRETEiJ_G0023328) #22	MGP_SPRETEiJ_G0023329	St8sia5 (MGP_SPRETEiJ_G0023330) #23	Loxhd1 (MGP_SPRETEiJ_G0023331) #24	8030462N17Rik (MGP_SPRETEiJ_G0023333)	Haus1 (MGP_SPRETEiJ_G0023334) #26	Atp5a1 (MGP_SPRETEiJ_G0023335) #27	Pstpip2 (MGP_SPRETEiJ_G0023336) #29	Epg5 (MGP_SPRETEiJ_G0023337) #30	Siglec15 (MGP_SPRETEiJ_G0023338) #31	Slc14a1 (MGP_SPRETEiJ_G0023339) #32	Slc14a2 (MGP_SPRETEiJ_G0023340) #33	MGP_SPRETEiJ_G0023341	Setbp1 (MGP_SPRETEiJ_G0023342) #34	Eola1 (MGP_SPRETEiJ_G0023343)	MGP_SPRETEiJ_G0023344
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	2730																ENSMSIG00000031992 #22	St8sia5 (ENSMSIG00000031990) #23	Loxhd1 (ENSMSIG00000031989) #24	Rnf165 (ENSMSIG00000031988) #25	8030462N17Rik (ENSMSIG00000031987)	Haus1 (ENSMSIG00000031985) #26	Atp5a1 (ENSMSIG00000031984) #27	Pstpip2 (ENSMSIG00000031982) #29
Steppe mouse	MODERN SPECIES	3130	Lipg (ENSMSIG00000019321)	Rpl17 (ENSMSIG00000019275)	BC031181 (ENSMSIG00000019259)	ENSMSIG00000019247	Dym (ENSMSIG00000019180)	Smad7 (ENSMSIG00000019123)	ENSMSIG00000019110	Ctif (ENSMSIG00000019005) #7	Zbtb7c (ENSMSIG00000018967) #10	ENSMSIG00000018946	Smad2 (ENSMSIG00000018887) #11	Skor2 (ENSMSIG00000018834) #13	ENSMSIG00000018819 #15	Hdhd2 (ENSMSIG00000018790) #16	Katnal2 (ENSMSIG00000018633) #21	ENSMSIG00000018626 #22
Laurasiatheria	ANCESTRAL SPECIES	23	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Laurasiatheria_a	ANCESTRAL SPECIES	13	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Artiodactyla	ANCESTRAL SPECIES	17	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000156943 #37	ENSGT00940000158673
Artiodactyla_a	ANCESTRAL SPECIES	17	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000156943 #37	ENSGT00940000158673
Artiodactyla_b	ANCESTRAL SPECIES	10	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000156943 #37	ENSGT00940000154201.a.a.a.b
Pecora	ANCESTRAL SPECIES	26	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368
Yarkand deer	MODERN SPECIES	19	ACAA2 (ENSCHYG00000026661)	LIPG (ENSCHYG00000026718)	ENSCHYG00000026734	C18orf32 (ENSCHYG00000026758)	DYM (ENSCHYG00000026793)	SMAD7 (ENSCHYG00000026860)	CTIF (ENSCHYG00000026870) #7	ENSCHYG00000026884	ZBTB7C (ENSCHYG00000009960) #10	ENSCHYG00000010021	SMAD2 (ENSCHYG00000010054) #11	ENSCHYG00000010193 #13	ENSCHYG00000010350 #15	HDHD2 (ENSCHYG00000010250) #16	KATNAL2 (ENSCHYG00000010401) #21	PIAS2 (ENSCHYG00000010761) #22	ENSCHYG00000010966	ST8SIA5 (ENSCHYG00000011028) #23	LOXHD1 (ENSCHYG00000011324) #24	ENSCHYG00000013406	ENSCHYG00000013803	HAUS1 (ENSCHYG00000013860) #26	ATP5F1A (ENSCHYG00000014052) #27	PSTPIP2 (ENSCHYG00000014255) #29	ENSCHYG00000014621	EPG5 (ENSCHYG00000014653) #30	SIGLEC15 (ENSCHYG00000014853) #31	SLC14A1 (ENSCHYG00000014960) #32	SLC14A2 (ENSCHYG00000015148) #33	SETBP1 (ENSCHYG00000015524) #34	ENSCHYG00000015620
Percora_a	ANCESTRAL SPECIES	28	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.ab #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00390000002368
Siberian musk deer	MODERN SPECIES	132	ENSMMSG00000006303	ACAA2 (ENSMMSG00000006348)	LIPG (ENSMMSG00000006397)	ENSMMSG00000006453	C18orf32 (ENSMMSG00000006526)	DYM (ENSMMSG00000006548)	SMAD7 (ENSMMSG00000006627)	CTIF (ENSMMSG00000006694) #7	ZBTB7C (ENSMMSG00000006737) #10	ENSMMSG00000006765 #11	SKOR2 (ENSMMSG00000006829) #13	IER3IP1 (ENSMMSG00000006915) #15	HDHD2 (ENSMMSG00000006946) #16	KATNAL2 (ENSMMSG00000006988) #21	ENSMMSG00000007106	PIAS2 (ENSMMSG00000007137) #22	ST8SIA5 (ENSMMSG00000007341) #23	LOXHD1 (ENSMMSG00000007604) #24	RNF165 (ENSMMSG00000011227) #25	C18orf25 (ENSMMSG00000011290)	HAUS1 (ENSMMSG00000011347) #26	ATP5F1A (ENSMMSG00000011430) #27	ENSMMSG00000011466	PSTPIP2 (ENSMMSG00000011495) #29	EPG5 (ENSMMSG00000011583) #30	SIGLEC15 (ENSMMSG00000011634) #31	SLC14A1 (ENSMMSG00000011666) #32	SLC14A2 (ENSMMSG00000011706) #33	SETBP1 (ENSMMSG00000011794) #34	MC2R (ENSMMSG00000011827)	MC5R (ENSMMSG00000011839)
Bovidae	ANCESTRAL SPECIES	28	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.ab #27	ENSGT00940000158788 #29	ENSGT00950000183198.c.b.a.u	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a
Bovinae	ANCESTRAL SPECIES	28	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741.i.b	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.ab #27	ENSGT00940000158788 #29	ENSGT00950000183198.c.b.a.u	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT01030000235502	ENSGT01030000234510.a.a.b
Bos	ANCESTRAL SPECIES	29	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741.j	ENSGT00950000183010.a.b.a.b.a	ENSGT00390000018741.i.b	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.ab #27	ENSGT00940000158788 #29	ENSGT00950000183198.c.b.a.u	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00390000010047.b.kb	ENSGT01030000235502
Bos_a	ANCESTRAL SPECIES	28	ENSGT00950000183005.a.a	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741.j	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.ab #27	ENSGT00940000158788 #29	ENSGT00950000183198.c.b.a.u	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00390000010047.b.kb	ENSGT01030000235502
Domestic yak	MODERN SPECIES	13	ACAA2 (ENSBGRG00000023212)	LIPG (ENSBGRG00000023098)	ENSBGRG00000022965	ENSBGRG00000022927	DYM (ENSBGRG00000022704)	SMAD7 (ENSBGRG00000022643)	ENSBGRG00000022591	CTIF (ENSBGRG00000022473) #7	ZBTB7C (ENSBGRG00000022372) #10	SMAD2 (ENSBGRG00000022238) #11	ENSBGRG00000022203 #13	IER3IP1 (ENSBGRG00000022154) #15	HDHD2 (ENSBGRG00000022037) #16	KATNAL2 (ENSBGRG00000021942) #21	ENSBGRG00000021911	PIAS2 (ENSBGRG00000021507) #22	ST8SIA5 (ENSBGRG00000021274) #23	LOXHD1 (ENSBGRG00000019547) #24	RNF165 (ENSBGRG00000019400) #25	C18orf25 (ENSBGRG00000019304)	HAUS1 (ENSBGRG00000019042) #26	ATP5F1A (ENSBGRG00000018791) #27	PSTPIP2 (ENSBGRG00000018564) #29	EPG5 (ENSBGRG00000018124) #30	SIGLEC15 (ENSBGRG00000018017) #31	SLC14A1 (ENSBGRG00000017647) #32	SLC14A2 (ENSBGRG00000017535) #33	SETBP1 (ENSBGRG00000017294) #34	ENSBGRG00000017233 #34	ENSBGRG00000017170	MC2R (ENSBGRG00000017129)
Wild yak	MODERN SPECIES	2191												ENSBMUG00000012703 #13	IER3IP1 (ENSBMUG00000012714) #15	HDHD2 (ENSBMUG00000012729) #16	KATNAL2 (ENSBMUG00000012760) #21	PIAS2 (ENSBMUG00000012834) #22	ST8SIA5 (ENSBMUG00000012907) #23
Bos_b	ANCESTRAL SPECIES	34	ENSGT00950000183005.a.a	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.a	ENSGT00390000018741.i.b	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.ab #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00390000010047.b.kb	ENSGT01030000235502	ENSGT01030000234510.a.a.b
Cow	MODERN SPECIES	16	MYO5B (ENSBTAG00000019455)	ACAA2 (ENSBTAG00000002863)	LIPG (ENSBTAG00000048916)	RPL17 (ENSBTAG00000022902)	C24H18orf32 (ENSBTAG00000021334)	DYM (ENSBTAG00000000024)	SMAD7 (ENSBTAG00000012441)	CTIF (ENSBTAG00000018901) #7	ZBTB7C (ENSBTAG00000013306) #10	SMAD2 (ENSBTAG00000039916) #11	SKOR2 (ENSBTAG00000032962) #13	IER3IP1 (ENSBTAG00000032961) #15	HDHD2 (ENSBTAG00000011893) #16	KATNAL2 (ENSBTAG00000019331) #21	ENSBTAG00000047547	PIAS2 (ENSBTAG00000007833) #22	ST8SIA5 (ENSBTAG00000001770) #23	LOXHD1 (ENSBTAG00000015210) #24	ENSBTAG00000048422	RNF165 (ENSBTAG00000001128) #25	C24H18orf25 (ENSBTAG00000032964)	HAUS1 (ENSBTAG00000002512) #26	ATP5F1A (ENSBTAG00000002507) #27	PSTPIP2 (ENSBTAG00000002624) #29	EPG5 (ENSBTAG00000012067) #30	SIGLEC15 (ENSBTAG00000016620) #31	SLC14A1 (ENSBTAG00000019870) #32	SLC14A2 (ENSBTAG00000002099) #33	SETBP1 (ENSBTAG00000018088) #34	ENSBTAG00000046153	ENSBTAG00000048673
Hybrid Bos Indicus	MODERN SPECIES	16	ACAA2 (ENSBIXG00005026872)	LIPG (ENSBIXG00005004622)	ENSBIXG00005007771	ENSBIXG00005027155	DYM (ENSBIXG00005027220)	SMAD7 (ENSBIXG00005004711)	CTIF (ENSBIXG00005007777) #7	ZBTB7C (ENSBIXG00005027504) #10	SMAD2 (ENSBIXG00005027591) #11	SKOR2 (ENSBIXG00005004756) #13	IER3IP1 (ENSBIXG00005027693) #15	ENSBIXG00005027700	HDHD2 (ENSBIXG00005027742) #16	KATNAL2 (ENSBIXG00005004778) #21	ENSBIXG00005006537	PIAS2 (ENSBIXG00005027955) #22	ST8SIA5 (ENSBIXG00005028065) #23	LOXHD1 (ENSBIXG00005028849) #24	ENSBIXG00005005062	RNF165 (ENSBIXG00005002180) #25	C18orf25 (ENSBIXG00005002109)	ENSBIXG00005005126 #26	ATP5F1A (ENSBIXG00005002010) #27	PSTPIP2 (ENSBIXG00005029098) #29	EPG5 (ENSBIXG00005005178) #30	SIGLEC15 (ENSBIXG00005029135) #31	SLC14A1 (ENSBIXG00005001781) #32	SLC14A2 (ENSBIXG00005029181) #33	SETBP1 (ENSBIXG00005029205) #34	ENSBIXG00005029232	MC2R (ENSBIXG00005006098)
American bison	MODERN SPECIES	3076						DYM (ENSBBBG00000010404)	SMAD7 (ENSBBBG00000010410)	CTIF (ENSBBBG00000010421) #7	ENSBBBG00000010424	ZBTB7C (ENSBBBG00000010443) #10	SMAD2 (ENSBBBG00000010465) #11	SKOR2 (ENSBBBG00000010476) #13	IER3IP1 (ENSBBBG00000010485) #15	HDHD2 (ENSBBBG00000010488) #16	KATNAL2 (ENSBBBG00000010508) #21	PIAS2 (ENSBBBG00000010545) #22
Caprinae	DUPLICATION
Caprinae	ANCESTRAL SPECIES	25	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b.m #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.ab.a #27	ENSGT00940000158788 #29	ENSGT00950000183198.c.b.a.u	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a
Goat	MODERN SPECIES	16	ACAA2 (ENSCHIG00000024466)	ENSCHIG00000003894	LIPG (ENSCHIG00000015994)	ENSCHIG00000011677	C18orf32 (ENSCHIG00000021354)	ENSCHIG00000004940	DYM (ENSCHIG00000001838)	SMAD7 (ENSCHIG00000019461)	CTIF (ENSCHIG00000014455) #7	ZBTB7C (ENSCHIG00000001635) #10	SMAD2 (ENSCHIG00000020206) #11	SKOR2 (ENSCHIG00000011642) #13	IER3IP1 (ENSCHIG00000020552) #15	HDHD2 (ENSCHIG00000015973) #16	KATNAL2 (ENSCHIG00000021217) #21	ENSCHIG00000014561 #22	ST8SIA5 (ENSCHIG00000021775) #23	LOXHD1 (ENSCHIG00000019780) #24	RNF165 (ENSCHIG00000009622) #25	C18orf25 (ENSCHIG00000014294)	HAUS1 (ENSCHIG00000027208) #26	ENSCHIG00000014708 #27	PSTPIP2 (ENSCHIG00000019291) #29	EPG5 (ENSCHIG00000003358) #30	SIGLEC15 (ENSCHIG00000008764) #31	SLC14A1 (ENSCHIG00000006085) #32	SLC14A2 (ENSCHIG00000023270) #33	SETBP1 (ENSCHIG00000014366) #34	MC2R (ENSCHIG00000006175)	MC5R (ENSCHIG00000019609)	RNMT (ENSCHIG00000000428)
Rambouillet Sheep	MODERN SPECIES	15	ACAA2 (ENSOARG00020011796)	LIPG (ENSOARG00020011622)	RPL17 (ENSOARG00020011339)	C18orf32 (ENSOARG00020011289)	ENSOARG00020011257	DYM (ENSOARG00020011069)	SMAD7 (ENSOARG00020010974)	CTIF (ENSOARG00020010822) #7	ZBTB7C (ENSOARG00020010706) #10	SMAD2 (ENSOARG00020010458) #11	SKOR2 (ENSOARG00020010308) #13	IER3IP1 (ENSOARG00020010237) #15	HDHD2 (ENSOARG00020010165) #16	ENSOARG00020010055 #17	KATNAL2 (ENSOARG00020009912) #21	PIAS2 (ENSOARG00020009642) #22	ST8SIA5 (ENSOARG00020009312) #23	LOXHD1 (ENSOARG00020006581) #24	RNF165 (ENSOARG00020006346) #25	C18orf25 (ENSOARG00020025062)	HAUS1 (ENSOARG00020025030) #26	ATP5F1A (ENSOARG00020025008) #27	PSTPIP2 (ENSOARG00020024936) #29	ENSOARG00020024920	EPG5 (ENSOARG00020024844) #30	SIGLEC15 (ENSOARG00020024818) #31	SLC14A1 (ENSOARG00020024788) #32	SLC14A2 (ENSOARG00020024734) #33	SETBP1 (ENSOARG00020024713) #34	ENSOARG00020024696	MC2R (ENSOARG00020024677)
Caprinae	ANCESTRAL SPECIES																	ENSGT01030000234539.a.a.b.b.n #22
Goat	MODERN SPECIES	13	LCMT2 (ENSCHIG00000004003)	TGM7 (ENSCHIG00000018370)	TGM5 (ENSCHIG00000015160)	MIS18BP1 (ENSCHIG00000023697)	FANCM (ENSCHIG00000015176)	FKBP3 (ENSCHIG00000018893)	PRPF39 (ENSCHIG00000010118)	TOGARAM1 (ENSCHIG00000015767)	KLHL28 (ENSCHIG00000023507)	C14orf28 (ENSCHIG00000008954)	ENSCHIG00000012257	ENSCHIG00000017232	ENSCHIG00000016320	ENSCHIG00000014697	ENSCHIG00000007447	ENSCHIG00000025383 #22	LRFN5 (ENSCHIG00000008107)	ENSCHIG00000016309	ENSCHIG00000018649	FBXO33 (ENSCHIG00000018083)	ENSCHIG00000010530	PNN (ENSCHIG00000016458)	TRAPPC6B (ENSCHIG00000009203)	GEMIN2 (ENSCHIG00000009881)	SEC23A (ENSCHIG00000026578)	CLEC14A (ENSCHIG00000008637)	SSTR1 (ENSCHIG00000006157)	ENSCHIG00000013240	FOXA1 (ENSCHIG00000023519)	MIPOL1 (ENSCHIG00000011846)	SLC25A21 (ENSCHIG00000017403)
Cetacea	ANCESTRAL SPECIES	11	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01000000220806	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00390000003990.l	ENSGT00940000156943 #37
Odontoceti	ANCESTRAL SPECIES	10	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741.k	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01000000220806	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00390000003990.l	ENSGT00940000156943 #37
Sperm whale	MODERN SPECIES	10	ENSPCTG00005010783	ENSPCTG00005010644	ACAA2 (ENSPCTG00005010500)	LIPG (ENSPCTG00005010413)	ENSPCTG00005010250	ENSPCTG00005010201	DYM (ENSPCTG00005009929)	CTIF (ENSPCTG00005009802) #7	ZBTB7C (ENSPCTG00005009728) #10	SMAD2 (ENSPCTG00005009494) #11	SKOR2 (ENSPCTG00005009374) #13	IER3IP1 (ENSPCTG00005009339) #15	HDHD2 (ENSPCTG00005009305) #16	KATNAL2 (ENSPCTG00005009038) #21	ENSPCTG00005008984	PIAS2 (ENSPCTG00005008808) #22	ENSPCTG00005008636 #24	ST8SIA5 (ENSPCTG00005008579) #23	ENSPCTG00005008447 #24	RNF165 (ENSPCTG00005008364) #25	C19H18orf25 (ENSPCTG00005008306)	HAUS1 (ENSPCTG00005008172) #26	ATP5F1A (ENSPCTG00005008127) #27	PSTPIP2 (ENSPCTG00005008088) #29	EPG5 (ENSPCTG00005008044) #30	SIGLEC15 (ENSPCTG00005008000) #31	SLC14A1 (ENSPCTG00005007875) #32	SLC14A2 (ENSPCTG00005007803) #33	SETBP1 (ENSPCTG00005007777) #34	ENSPCTG00005007758	ENSPCTG00005007743
Odontoceti_a	ANCESTRAL SPECIES	9	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741.k	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01000000220806	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00390000003349.d	ENSGT00390000003990.l
Dolphin	MODERN SPECIES	2323																PIAS2 (ENSTTRG00000006019) #22
Odontoceti_b	ANCESTRAL SPECIES	10	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741.k	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01000000220806	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00390000003349.d	ENSGT00390000003990.l
Monodontidae	ANCESTRAL SPECIES	8	ENSGT00940000169764	ENSGT00940000159394	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00390000018741.k	ENSGT00390000008772	ENSGT00940000159872	ENSGT00390000008808.k.a.a	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01000000220806	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00950000183064.b.d	ENSGT00940000153244.B.y.b	ENSGT00940000159026 #35
Beluga whale	MODERN SPECIES	85											SKOR2 (ENSDLEG00000017834) #13	ENSDLEG00000017903	HDHD2 (ENSDLEG00000017914) #16	KATNAL2 (ENSDLEG00000017942) #21	ENSDLEG00000018112	PIAS2 (ENSDLEG00000018124) #22	ST8SIA5 (ENSDLEG00000018143) #23	LOXHD1 (ENSDLEG00000018163) #24	RNF165 (ENSDLEG00000018238) #25	CUNH18orf25 (ENSDLEG00000018251)	HAUS1 (ENSDLEG00000018258) #26	ATP5A1 (ENSDLEG00000018272) #27	PSTPIP2 (ENSDLEG00000018281) #29	EPG5 (ENSDLEG00000018365) #30	SIGLEC15 (ENSDLEG00000018831) #31	SLC14A1 (ENSDLEG00000018837) #32	SLC14A2 (ENSDLEG00000018851) #33	SETBP1 (ENSDLEG00000018888) #34	ENSDLEG00000018895	ENSDLEG00000018899	ENSDLEG00000018905
Narwhal	MODERN SPECIES	295	LIPG (ENSMMNG00015000826)	ENSMMNG00015000862	ENSMMNG00015000947	DYM (ENSMMNG00015001014)	ENSMMNG00015001110	SMAD7 (ENSMMNG00015001136)	ENSMMNG00015001156	CTIF (ENSMMNG00015001193) #7	ZBTB7C (ENSMMNG00015001274) #10	SMAD2 (ENSMMNG00015001331) #11	SKOR2 (ENSMMNG00015001428) #13	ENSMMNG00015001451 #15	HDHD2 (ENSMMNG00015001468) #16	KATNAL2 (ENSMMNG00015001513) #21	ENSMMNG00015001565	PIAS2 (ENSMMNG00015001607) #22	ST8SIA5 (ENSMMNG00015001685) #23	LOXHD1 (ENSMMNG00015002006) #24	RNF165 (ENSMMNG00015002686) #25	C18orf25 (ENSMMNG00015002704)	HAUS1 (ENSMMNG00015002726) #26	ATP5F1A (ENSMMNG00015002755) #27	PSTPIP2 (ENSMMNG00015002786) #29	EPG5 (ENSMMNG00015002843) #30	SIGLEC15 (ENSMMNG00015002905) #31	SLC14A1 (ENSMMNG00015002937) #32	SLC14A2 (ENSMMNG00015002988) #33	SETBP1 (ENSMMNG00015003067) #34	ENSMMNG00015003095	ENSMMNG00015003111	SYT4 (ENSMMNG00015003150) #35
Vaquita	MODERN SPECIES	5	ACAA2 (ENSPSNG00000009112)	LIPG (ENSPSNG00000009216)	ENSPSNG00000009327	ENSPSNG00000009445	DYM (ENSPSNG00000009515)	ENSPSNG00000009632	ENSPSNG00000009707	CTIF (ENSPSNG00000009732) #7	ZBTB7C (ENSPSNG00000009825) #10	SMAD2 (ENSPSNG00000009901) #11	SKOR2 (ENSPSNG00000010229) #13	IER3IP1 (ENSPSNG00000010315) #15	HDHD2 (ENSPSNG00000010382) #16	KATNAL2 (ENSPSNG00000010440) #21	ENSPSNG00000010683	PIAS2 (ENSPSNG00000010743) #22	ST8SIA5 (ENSPSNG00000010902) #23	LOXHD1 (ENSPSNG00000011419) #24	RNF165 (ENSPSNG00000013772) #25	C18orf25 (ENSPSNG00000013977)	HAUS1 (ENSPSNG00000014089) #26	ATP5F1A (ENSPSNG00000014199) #27	PSTPIP2 (ENSPSNG00000014312) #29	EPG5 (ENSPSNG00000014417) #30	SIGLEC15 (ENSPSNG00000014516) #31	SLC14A1 (ENSPSNG00000014661) #32	SLC14A2 (ENSPSNG00000015077) #33	SETBP1 (ENSPSNG00000015348) #34	ENSPSNG00000015482	ENSPSNG00000015523	ENSPSNG00000015545
Blue whale	MODERN SPECIES	5	LIPG (ENSBMSG00010021562)	ENSBMSG00010021535	C18orf32 (ENSBMSG00010021530)	DYM (ENSBMSG00010021517)	SMAD7 (ENSBMSG00010021494)	CTIF (ENSBMSG00010021461) #7	ZBTB7C (ENSBMSG00010021442) #10	SMAD2 (ENSBMSG00010021413) #11	SKOR2 (ENSBMSG00010021387) #13	ENSBMSG00010021377	IER3IP1 (ENSBMSG00010021374) #15	HDHD2 (ENSBMSG00010021363) #16	ENSBMSG00010021354 #17	KATNAL2 (ENSBMSG00010021337) #21	ENSBMSG00010021325	PIAS2 (ENSBMSG00010021288) #22	ST8SIA5 (ENSBMSG00010021215) #23	LOXHD1 (ENSBMSG00010020792) #24	RNF165 (ENSBMSG00010020628) #25	C18orf25 (ENSBMSG00010020596)	HAUS1 (ENSBMSG00010020557) #26	ATP5F1A (ENSBMSG00010020528) #27	ENSBMSG00010020513	PSTPIP2 (ENSBMSG00010020499) #29	EPG5 (ENSBMSG00010020473) #30	SIGLEC15 (ENSBMSG00010020448) #31	SLC14A1 (ENSBMSG00010020365) #32	SLC14A2 (ENSBMSG00010020311) #33	SETBP1 (ENSBMSG00010020281) #34	SYT4 (ENSBMSG00010020248) #35	ENSBMSG00010020228
Camelidae	ANCESTRAL SPECIES	53	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT00390000002428.a.g.b #17	ENSGT01030000234539.a.a.b.b #22	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34
Arabian camel	MODERN SPECIES	23	ACAA2 (ENSCDRG00005010799)	ENSCDRG00005010930	LIPG (ENSCDRG00005010970)	RPL17 (ENSCDRG00005011453)	C18orf32 (ENSCDRG00005011639)	DYM (ENSCDRG00005011719)	ENSCDRG00005012031	ENSCDRG00005012050	CTIF (ENSCDRG00005012119) #7	ZBTB7C (ENSCDRG00005012395) #10	SMAD2 (ENSCDRG00005012465) #11	IER3IP1 (ENSCDRG00005012846) #15	HDHD2 (ENSCDRG00005012918) #16	KATNAL2 (ENSCDRG00005012992) #21	ENSCDRG00005013155 #17	PIAS2 (ENSCDRG00005013189) #22	LOXHD1 (ENSCDRG00005013391) #24	ENSCDRG00005014972 #25	ENSCDRG00005015011	C18orf25 (ENSCDRG00005015062)	HAUS1 (ENSCDRG00005015141) #26	ATP5F1A (ENSCDRG00005015287) #27	PSTPIP2 (ENSCDRG00005015365) #29	EPG5 (ENSCDRG00005015455) #30	SIGLEC15 (ENSCDRG00005015557) #31	SLC14A1 (ENSCDRG00005015615) #32	ENSCDRG00005015812 #33	ENSCDRG00005015929 #33	SETBP1 (ENSCDRG00005016013) #34	ENSCDRG00005016038	ENSCDRG00005016068
Alpaca	MODERN SPECIES	5383																PIAS2 (ENSVPAG00000012376) #22
Suina	ANCESTRAL SPECIES	12	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34
Pig	MODERN SPECIES		MYO5B (ENSSSCG00000004511)	ACAA2 (ENSSSCG00000004510)	LIPG (ENSSSCG00000004509)	ENSSSCG00000035007	C18orf32 (ENSSSCG00000034415)	DYM (ENSSSCG00000004508)	SMAD7 (ENSSSCG00000004507)	CTIF (ENSSSCG00000004506) #7	ZBTB7C (ENSSSCG00000028076) #10	SMAD2 (ENSSSCG00000004505) #11	SKOR2 (ENSSSCG00000005767) #13	ENSSSCG00000039669	IER3IP1 (ENSSSCG00000060420) #15	HDHD2 (ENSSSCG00000005771) #16	KATNAL2 (ENSSSCG00000022643) #21	PIAS2 (ENSSSCG00000034730) #22	ST8SIA5 (ENSSSCG00000032053) #23	LOXHD1 (ENSSSCG00000004503) #24	RNF165 (ENSSSCG00000004502) #25	C18orf25 (ENSSSCG00000004500)	HAUS1 (ENSSSCG00000004498) #26	ATP5F1A (ENSSSCG00000004499) #27	PSTPIP2 (ENSSSCG00000060601) #29	EPG5 (ENSSSCG00000021072) #30	SIGLEC15 (ENSSSCG00000004493) #31	SLC14A1 (ENSSSCG00000004492) #32	ENSSSCG00000004491 #33	ENSSSCG00000045948	SETBP1 (ENSSSCG00000004490) #34	ENSSSCG00000008882	ENSSSCG00000005790
Chacoan peccary	MODERN SPECIES	124												SKOR2 (ENSCWAG00000008664) #13	IER3IP1 (ENSCWAG00000008743) #15	HDHD2 (ENSCWAG00000008775) #16	KATNAL2 (ENSCWAG00000008820) #21	PIAS2 (ENSCWAG00000009072) #22	ENSCWAG00000009195
Laurasiatheria_b	ANCESTRAL SPECIES	13	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT01030000240358	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.b #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Carnivora	ANCESTRAL SPECIES	13	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT01030000240358	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.b #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Caniformia	ANCESTRAL SPECIES	9	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT01030000240358	ENSGT00390000006029 #26	ENSGT00550000074846.bb.b #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.b #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Caniformia_b	ANCESTRAL SPECIES	25	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT01030000240358	ENSGT00390000006029 #26	ENSGT00550000074846.bb.b #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.b #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Ursidae	ANCESTRAL SPECIES	23	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT01030000240358	ENSGT00390000006029 #26	ENSGT00550000074846.bb.b #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT00940000167582	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Ursus	ANCESTRAL SPECIES	25	ENSGT00950000183005.a.a	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.d	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.bb.b #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37	ENSGT00940000154201.a.a.a.b
American black bear	MODERN SPECIES	2360																PIAS2 (ENSUAMG00000008036) #22	ST8SIA5 (ENSUAMG00000008510) #23
Polar bear	MODERN SPECIES	96	CXXC1 (ENSUMAG00000003014)	MBD1 (ENSUMAG00000002947)	MYO5B (ENSUMAG00000002812)	ACAA2 (ENSUMAG00000002792)	LIPG (ENSUMAG00000002779)	ENSUMAG00000002766	C18orf32 (ENSUMAG00000002755)	DYM (ENSUMAG00000002750)	ENSUMAG00000002746	CTIF (ENSUMAG00000002735) #7	ZBTB7C (ENSUMAG00000002721) #10	SMAD2 (ENSUMAG00000002720) #11	IER3IP1 (ENSUMAG00000002717) #15	HDHD2 (ENSUMAG00000002716) #16	KATNAL2 (ENSUMAG00000002674) #21	PIAS2 (ENSUMAG00000002661) #22	ST8SIA5 (ENSUMAG00000002618) #23	LOXHD1 (ENSUMAG00000002413) #24	RNF165 (ENSUMAG00000002386) #25	C18orf25 (ENSUMAG00000002382)	HAUS1 (ENSUMAG00000002378) #26	ATP5F1A (ENSUMAG00000002375) #27	PSTPIP2 (ENSUMAG00000002367) #29	EPG5 (ENSUMAG00000002362) #30	SLC14A1 (ENSUMAG00000002359) #32	ENSUMAG00000002312 #33	SETBP1 (ENSUMAG00000002294) #34	SYT4 (ENSUMAG00000002280) #35	RIT2 (ENSUMAG00000002274) #36	PIK3C3 (ENSUMAG00000002253) #37	ENSUMAG00000002210
Giant Panda	MODERN SPECIES	5	MBD1 (ENSAMEG00000000238)	MYO5B (ENSAMEG00000009253)	ACAA2 (ENSAMEG00000009411)	LIPG (ENSAMEG00000009434)	RPL17 (ENSAMEG00000009498)	ENSAMEG00000027976	DYM (ENSAMEG00000006724)	SMAD7 (ENSAMEG00000031009)	CTIF (ENSAMEG00000029852) #7	ZBTB7C (ENSAMEG00000012857) #10	SMAD2 (ENSAMEG00000012816) #11	ENSAMEG00000012815 #13	IER3IP1 (ENSAMEG00000023574) #15	HDHD2 (ENSAMEG00000012799) #16	KATNAL2 (ENSAMEG00000012794) #21	PIAS2 (ENSAMEG00000012748) #22	LOXHD1 (ENSAMEG00000012676) #24	RNF165 (ENSAMEG00000012667) #25	C18orf25 (ENSAMEG00000012662)	ENSAMEG00000025621	HAUS1 (ENSAMEG00000012644) #26	ATP5F1A (ENSAMEG00000012614) #27	PSTPIP2 (ENSAMEG00000012579) #29	EPG5 (ENSAMEG00000012534) #30	ENSAMEG00000027408	SLC14A1 (ENSAMEG00000012521) #32	ENSAMEG00000005289 #33	SETBP1 (ENSAMEG00000029118) #34	SYT4 (ENSAMEG00000006769) #35	RIT2 (ENSAMEG00000024343) #36	ENSAMEG00000007466 #37
Mustelinae	ANCESTRAL SPECIES	5	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a.c.a	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.bb.b #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.b #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Ferret	MODERN SPECIES	195			MYO5B (ENSMPUG00000000748)	ACAA2 (ENSMPUG00000000749)	LIPG (ENSMPUG00000000750)	ENSMPUG00000000801	ENSMPUG00000000819	DYM (ENSMPUG00000000838)	SMAD7 (ENSMPUG00000000842)	CTIF (ENSMPUG00000000844) #7	ZBTB7C (ENSMPUG00000000848) #10	SMAD2 (ENSMPUG00000000850) #11	ENSMPUG00000000851 #13	HDHD2 (ENSMPUG00000000855) #16	KATNAL2 (ENSMPUG00000000857) #21	PIAS2 (ENSMPUG00000000861) #22	ST8SIA5 (ENSMPUG00000000867) #23	LOXHD1 (ENSMPUG00000000881) #24	RNF165 (ENSMPUG00000000899) #25	C18orf25 (ENSMPUG00000000916)	HAUS1 (ENSMPUG00000000919) #26	ENSMPUG00000000923 #27	PSTPIP2 (ENSMPUG00000000965) #29	EPG5 (ENSMPUG00000000970) #30	SIGLEC15 (ENSMPUG00000000985) #31	SLC14A1 (ENSMPUG00000000989) #32	ENSMPUG00000001002 #33	SETBP1 (ENSMPUG00000001006) #34	SYT4 (ENSMPUG00000001012) #35	RIT2 (ENSMPUG00000001015) #36	PIK3C3 (ENSMPUG00000001018) #37
American mink	MODERN SPECIES	1	CFAP53 (ENSNVIG00000001864)	MYO5B (ENSNVIG00000001798)	ACAA2 (ENSNVIG00000001712)	LIPG (ENSNVIG00000001676)	RPL17 (ENSNVIG00000001575)	CR032 (ENSNVIG00000001568)	DYM (ENSNVIG00000001500)	SMAD7 (ENSNVIG00000001490)	CTIF (ENSNVIG00000001442) #7	ZBTB7C (ENSNVIG00000001419) #10	SMAD2 (ENSNVIG00000001323) #11	SKOR2 (ENSNVIG00000001287) #13	IER3IP1 (ENSNVIG00000001270) #15	HDHD2 (ENSNVIG00000001251) #16	KATNAL2 (ENSNVIG00000001211) #21	PIAS2 (ENSNVIG00000001141) #22	B7Z1K9 (ENSNVIG00000001042) #23	LOXHD1 (ENSNVIG00000000795) #24	RNF165 (ENSNVIG00000000779) #25	CR025 (ENSNVIG00000000751)	HAUS1 (ENSNVIG00000000735) #26	ATP5F1A (ENSNVIG00000000707) #27	PSTPIP2 (ENSNVIG00000000692) #29	EPG5 (ENSNVIG00000000422) #30	SIGLEC15 (ENSNVIG00000000415) #31	UT1 (ENSNVIG00000000284) #32	ENSNVIG00000000164 #33	SETBP1 (ENSNVIG00000000055) #34	ENSNVIG00000021282	SYT4 (ENSNVIG00000021264) #35	RIT2 (ENSNVIG00000021238) #36
Canidae	ANCESTRAL SPECIES	1	ENSGT00940000161706	ENSGT00390000000920	ENSGT00940000163114	ENSGT00940000161959	ENSGT00940000161276.C	ENSGT00940000161986	ENSGT00940000161896.a.a	ENSGT00910000144329	ENSGT00940000162189	ENSGT00940000161606	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.bb.b.a #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.b #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00390000016908.b	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Canis_lupus	ANCESTRAL SPECIES	4	ENSGT00940000161706	ENSGT00390000000920	ENSGT00940000163114	ENSGT00940000161959	ENSGT00940000161276.C	ENSGT00940000161986	ENSGT00940000161896.a.a	ENSGT00910000144329	ENSGT00940000162189	ENSGT00940000161606	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.bb.b.a #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.b #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00950000182901.b	ENSGT00390000016908.b	ENSGT00940000159026 #35
Dingo	MODERN SPECIES	271	S100A16 (ENSCAFG00020010346)	S100A2 (ENSCAFG00020010348)	S100A3 (ENSCAFG00020010349)	ENSCAFG00020010352	S100A5 (ENSCAFG00020010354)	ENSCAFG00020010358	S100A8 (ENSCAFG00020010359)	S100A12 (ENSCAFG00020010365)	ENSCAFG00020010368	ENSCAFG00020010374 #11	ENSCAFG00020010376 #11	SKOR2 (ENSCAFG00020010387) #13	ENSCAFG00020010389 #15	HDHD2 (ENSCAFG00020010391) #16	KATNAL2 (ENSCAFG00020010403) #21	PIAS2 (ENSCAFG00020010501) #22	ST8SIA5 (ENSCAFG00020010505) #23	LOXHD1 (ENSCAFG00020010557) #24	RNF165 (ENSCAFG00020010709) #25	C18orf25 (ENSCAFG00020010717)	HAUS1 (ENSCAFG00020010719) #26	ENSCAFG00020010725 #27	PSTPIP2 (ENSCAFG00020010751) #29	EPG5 (ENSCAFG00020010774) #30	SIGLEC15 (ENSCAFG00020010814) #31	SLC14A1 (ENSCAFG00020010836) #32	ENSCAFG00020010873 #33	SETBP1 (ENSCAFG00020010948) #34	ENSCAFG00020011019	SYT4 (ENSCAFG00020011042) #35	RIT2 (ENSCAFG00020011070) #36
Dog	MODERN SPECIES	35	S100A1 (ENSCAFG00845001897)	S100A13 (ENSCAFG00845001940)	S100A14 (ENSCAFG00845001986)	S100A16 (ENSCAFG00845002007)	S100A2 (ENSCAFG00845002036)	S100A4 (ENSCAFG00845002094)	S100A5 (ENSCAFG00845002122)	S100A8 (ENSCAFG00845002217)	S100A8 (ENSCAFG00845002254)	S100A9 (ENSCAFG00845002276)	SMAD2 (ENSCAFG00845002338) #11	SKOR2 (ENSCAFG00845002418) #13	IER3IP1 (ENSCAFG00845002460) #15	HDHD2 (ENSCAFG00845002479) #16	KATNAL2 (ENSCAFG00845002494) #21	PIAS2 (ENSCAFG00845002646) #22	ST8SIA5 (ENSCAFG00845002742) #23	ENSCAFG00845002851 #24	C7H18orf25 (ENSCAFG00845003098) #25	C7H18orf25 (ENSCAFG00845003164)	HAUS1 (ENSCAFG00845003245) #26	ATP5F1A (ENSCAFG00845003277) #27	PSTPIP2 (ENSCAFG00845003305) #29	EPG5 (ENSCAFG00845003404) #30	SIGLEC15 (ENSCAFG00845003447) #31	SLC14A1 (ENSCAFG00845003486) #32	ENSCAFG00845003569 #33	ENSCAFG00845003594 #33	SETBP1 (ENSCAFG00845003603) #34	ENSCAFG00845003617	ENSCAFG00845003645
Red fox	MODERN SPECIES	23	S100A14 (ENSVVUG00000028252)	S100A16 (ENSVVUG00000028251)	S100A2 (ENSVVUG00000028250)	S100A3 (ENSVVUG00000028247)	S100A4 (ENSVVUG00000028246)	S100A5 (ENSVVUG00000028245)	ENSVVUG00000028244	S100A8 (ENSVVUG00000028243)	S100A12 (ENSVVUG00000028241)	S100A9 (ENSVVUG00000028236)	SMAD2 (ENSVVUG00000028225) #11	ENSVVUG00000028208 #13	IER3IP1 (ENSVVUG00000028197) #15	HDHD2 (ENSVVUG00000028191) #16	KATNAL2 (ENSVVUG00000028183) #21	PIAS2 (ENSVVUG00000028165) #22	ST8SIA5 (ENSVVUG00000028155) #23	LOXHD1 (ENSVVUG00000028114) #24	RNF165 (ENSVVUG00000028094) #25	CUNH18orf25 (ENSVVUG00000028091)	HAUS1 (ENSVVUG00000028089) #26	ENSVVUG00000028013 #27	PSTPIP2 (ENSVVUG00000027962) #29	EPG5 (ENSVVUG00000027828) #30	SLC14A1 (ENSVVUG00000027806) #32	SLC14A2 (ENSVVUG00000027800) #33	SETBP1 (ENSVVUG00000027793) #34	ENSVVUG00000027791	ENSVVUG00000027783	SYT4 (ENSVVUG00000027777) #35	ENSVVUG00000027774 #36
Felidae	ANCESTRAL SPECIES	24	ENSGT01050000244995	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.a.a	ENSGT00390000018741.m	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.b #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00390000017839.o.b.b.b	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Panthera	ANCESTRAL SPECIES	24	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.a.b	ENSGT00390000018741.m	ENSGT00390000008772	ENSGT00940000153201.j.n	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.b #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00390000017839.o.b.b.b	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Tiger	MODERN SPECIES	143	MYO5B (ENSPTIG00000019987)	ACAA2 (ENSPTIG00000021827)	LIPG (ENSPTIG00000000449)	ENSPTIG00000007691	C18orf32 (ENSPTIG00000009698)	DYM (ENSPTIG00000011072)	ENSPTIG00000012715	ENSPTIG00000013182	CTIF (ENSPTIG00000013761) #7	ENSPTIG00000014786	SMAD2 (ENSPTIG00000015931) #11	ENSPTIG00000019038 #13	IER3IP1 (ENSPTIG00000019219) #15	HDHD2 (ENSPTIG00000019534) #16	KATNAL2 (ENSPTIG00000019828) #21	PIAS2 (ENSPTIG00000020076) #22	ST8SIA5 (ENSPTIG00000021493) #23	LOXHD1 (ENSPTIG00000003929) #24	ENSPTIG00000018660 #25	C18orf25 (ENSPTIG00000018925)	HAUS1 (ENSPTIG00000020327) #26	ATP5F1A (ENSPTIG00000020666) #27	PSTPIP2 (ENSPTIG00000021622) #29	EPG5 (ENSPTIG00000021849) #30	SLC14A1 (ENSPTIG00000021937) #32	ENSPTIG00000004707 #33	SETBP1 (ENSPTIG00000007128) #34
Panthera_a	ANCESTRAL SPECIES	26	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.a.b	ENSGT00390000018741.m	ENSGT00390000008772	ENSGT00940000153201.j.n	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.b #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00390000017839.o.b.b.b	ENSGT00940000159026 #35	ENSGT00940000161402 #36
leopard	MODERN SPECIES	43	MYO5B (ENSPPRG00000012444)	ACAA2 (ENSPPRG00000009885)	LIPG (ENSPPRG00000009382)	ENSPPRG00000006166	ENSPPRG00000004942	DYM (ENSPPRG00000004872)	ENSPPRG00000003458	SMAD7 (ENSPPRG00000002686)	CTIF (ENSPPRG00000002265) #7	ZBTB7C (ENSPPRG00000001432) #10	SMAD2 (ENSPPRG00000000616) #11	ENSPPRG00000000048 #13	IER3IP1 (ENSPPRG00000022716) #15	HDHD2 (ENSPPRG00000022964) #16	KATNAL2 (ENSPPRG00000023079) #21	PIAS2 (ENSPPRG00000023399) #22	ST8SIA5 (ENSPPRG00000018954) #23	LOXHD1 (ENSPPRG00000016773) #24	RNF165 (ENSPPRG00000006559) #25	C18orf25 (ENSPPRG00000005801)	HAUS1 (ENSPPRG00000004691) #26	ATP5F1A (ENSPPRG00000004018) #27	PSTPIP2 (ENSPPRG00000002553) #29	EPG5 (ENSPPRG00000000539) #30	SIGLEC15 (ENSPPRG00000000322) #31	SLC14A1 (ENSPPRG00000022676) #32	ENSPPRG00000024428 #33	SETBP1 (ENSPPRG00000024951) #34	ENSPPRG00000022104	SYT4 (ENSPPRG00000021203) #35	ENSPPRG00000019604 #36
lion	MODERN SPECIES	12	MYO5B (ENSPLOG00000013501)	ACAA2 (ENSPLOG00000013846)	LIPG (ENSPLOG00000014024)	ENSPLOG00000014279	ENSPLOG00000014438	DYM (ENSPLOG00000014488)	ENSPLOG00000014599	SMAD7 (ENSPLOG00000014649)	CTIF (ENSPLOG00000014765) #7	ZBTB7C (ENSPLOG00000014833) #10	SMAD2 (ENSPLOG00000014910) #11	SKOR2 (ENSPLOG00000015171) #13	IER3IP1 (ENSPLOG00000015259) #15	HDHD2 (ENSPLOG00000015310) #16	KATNAL2 (ENSPLOG00000015369) #21	PIAS2 (ENSPLOG00000015647) #22	ST8SIA5 (ENSPLOG00000015755) #23	LOXHD1 (ENSPLOG00000016139) #24	RNF165 (ENSPLOG00000017833) #25	C18orf25 (ENSPLOG00000017933)	HAUS1 (ENSPLOG00000017982) #26	ATP5F1A (ENSPLOG00000018053) #27	PSTPIP2 (ENSPLOG00000018143) #29	EPG5 (ENSPLOG00000018247) #30	SIGLEC15 (ENSPLOG00000018426) #31	SLC14A1 (ENSPLOG00000018513) #32	ENSPLOG00000018641 #33	SETBP1 (ENSPLOG00000018804) #34	ENSPLOG00000018869	ZNF236 (ENSPLOG00000018933)	ENSPLOG00000019137
Cat	MODERN SPECIES	243	CXXC1 (ENSFCAG00000006135)	MBD1 (ENSFCAG00000015730)	MYO5B (ENSFCAG00000009880)	LIPG (ENSFCAG00000012354)	RPL17 (ENSFCAG00000011342)	ENSFCAG00000022684	DYM (ENSFCAG00000012954)	SMAD7 (ENSFCAG00000042475)	CTIF (ENSFCAG00000000664) #7	ZBTB7C (ENSFCAG00000030658) #10	SMAD2 (ENSFCAG00000013266) #11	SKOR2 (ENSFCAG00000045761) #13	IER3IP1 (ENSFCAG00000032516) #15	HDHD2 (ENSFCAG00000002788) #16	KATNAL2 (ENSFCAG00000018778) #21	PIAS2 (ENSFCAG00000002787) #22	ST8SIA5 (ENSFCAG00000002786) #23	LOXHD1 (ENSFCAG00000002785) #24	RNF165 (ENSFCAG00000002784) #25	CD3H18orf25 (ENSFCAG00000030676)	HAUS1 (ENSFCAG00000003729) #26	ATP5F1A (ENSFCAG00000025952) #27	PSTPIP2 (ENSFCAG00000029753) #29	EPG5 (ENSFCAG00000010674) #30	SIGLEC15 (ENSFCAG00000031358) #31	SLC14A1 (ENSFCAG00000025903) #32	ENSFCAG00000010670 #33	SETBP1 (ENSFCAG00000007346) #34	ENSFCAG00000045259	SYT4 (ENSFCAG00000033996) #35	RIT2 (ENSFCAG00000010100) #36
Laurasiatheria_c	ANCESTRAL SPECIES	24	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT01030000240358	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.b #31	ENSGT01080000257333.E.o.a.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35
Chiroptera	ANCESTRAL SPECIES	26	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00950000183010.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.b #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Microchiroptera	ANCESTRAL SPECIES	26	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.b #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Microbat	DUPLICATION
Microbat	MODERN SPECIES	953	MBD1 (ENSMLUG00000008286)	ENSMLUG00000016723	MYO5B (ENSMLUG00000016701)	ACAA2 (ENSMLUG00000022960)	LIPG (ENSMLUG00000004113)	ENSMLUG00000029264	DYM (ENSMLUG00000003419)	SMAD7 (ENSMLUG00000016080)	CTIF (ENSMLUG00000003025) #7	ZBTB7C (ENSMLUG00000030000) #10	SMAD2 (ENSMLUG00000008857) #11	ENSMLUG00000028440 #13	ENSMLUG00000028696 #13	HDHD2 (ENSMLUG00000004087) #16	KATNAL2 (ENSMLUG00000004078) #21	ENSMLUG00000008902 #22	ST8SIA5 (ENSMLUG00000008890) #23	LOXHD1 (ENSMLUG00000008832) #24	RNF165 (ENSMLUG00000008813) #25	C18orf25 (ENSMLUG00000008806)	HAUS1 (ENSMLUG00000009879) #26	ATP5F1A (ENSMLUG00000009856) #27	PSTPIP2 (ENSMLUG00000009831) #29	EPG5 (ENSMLUG00000009791) #30	SIGLEC15 (ENSMLUG00000004894) #31	SLC14A1 (ENSMLUG00000004885) #32	SLC14A2 (ENSMLUG00000000990) #33	ENSMLUG00000013354 #34	ENSMLUG00000022722 #34	SYT4 (ENSMLUG00000016472) #35	PIK3C3 (ENSMLUG00000014471) #37
Microbat	MODERN SPECIES	1041	HEPHL1 (ENSMLUG00000008248)	ENSMLUG00000022473	VSTM5 (ENSMLUG00000029725)	MED17 (ENSMLUG00000011467)	C11orf54 (ENSMLUG00000011443)	ENSMLUG00000011431	CEP295 (ENSMLUG00000011383)	SMCO4 (ENSMLUG00000006975)	DEUP1 (ENSMLUG00000015504)	ENSMLUG00000030695	SLC36A4 (ENSMLUG00000005983)	ENSMLUG00000001084	MTNR1B (ENSMLUG00000011618)	FAT3 (ENSMLUG00000015758)	ENSMLUG00000025510	ENSMLUG00000025560 #22
Greater horseshoe bat	MODERN SPECIES	10	CFAP53 (ENSRFEG00010015022)	MYO5B (ENSRFEG00010014892)	ACAA2 (ENSRFEG00010014660)	LIPG (ENSRFEG00010014542)	C18orf32 (ENSRFEG00010014487)	DYM (ENSRFEG00010014390)	SMAD7 (ENSRFEG00010014226)	CTIF (ENSRFEG00010014128) #7	ZBTB7C (ENSRFEG00010014086) #10	SMAD2 (ENSRFEG00010013927) #11	SKOR2 (ENSRFEG00010013793) #13	IER3IP1 (ENSRFEG00010013708) #15	HDHD2 (ENSRFEG00010013605) #16	ENSRFEG00010013519 #17	KATNAL2 (ENSRFEG00010013030) #21	PIAS2 (ENSRFEG00010012942) #22	ENSRFEG00010012921	ST8SIA5 (ENSRFEG00010012732) #23	LOXHD1 (ENSRFEG00010010653) #24	RNF165 (ENSRFEG00010010311) #25	C18orf25 (ENSRFEG00010010226)	HAUS1 (ENSRFEG00010010163) #26	ATP5F1A (ENSRFEG00010010087) #27	PSTPIP2 (ENSRFEG00010010012) #29	EPG5 (ENSRFEG00010009969) #30	SIGLEC15 (ENSRFEG00010009873) #31	ENSRFEG00010009827	SLC14A1 (ENSRFEG00010009754) #32	SLC14A2 (ENSRFEG00010009717) #33	SETBP1 (ENSRFEG00010009647) #34	SYT4 (ENSRFEG00010009492) #35
Megabat	MODERN SPECIES	3197																PIAS2 (ENSPVAG00000016577) #22
Equus	ANCESTRAL SPECIES	36	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00390000002428.a.g.b #17	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT01030000240358	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Donkey	MODERN SPECIES	27	ACAA2 (ENSEASG00005005395)	LIPG (ENSEASG00005005399)	ENSEASG00005025626	ENSEASG00005031152	DYM (ENSEASG00005015845)	SMAD7 (ENSEASG00005016092)	CTIF (ENSEASG00005016094) #7	ZBTB7C (ENSEASG00005016097) #10	SMAD2 (ENSEASG00005016099) #11	SKOR2 (ENSEASG00005016101) #13	IER3IP1 (ENSEASG00005037358) #15	HDHD2 (ENSEASG00005016104) #16	ENSEASG00005028481 #17	KATNAL2 (ENSEASG00005016106) #21	ENSEASG00005016132	PIAS2 (ENSEASG00005016126) #22	ST8SIA5 (ENSEASG00005016136) #23	LOXHD1 (ENSEASG00005016151) #24	RNF165 (ENSEASG00005016163) #25	C18orf25 (ENSEASG00005016164)	HAUS1 (ENSEASG00005016165) #26	ATP5F1A (ENSEASG00005016183) #27	PSTPIP2 (ENSEASG00005016428) #29	SIGLEC15 (ENSEASG00005034343) #31	EPG5 (ENSEASG00005016455) #30	SLC14A1 (ENSEASG00005016489) #32	SLC14A2 (ENSEASG00005016499) #33	SETBP1 (ENSEASG00005016505) #34	SYT4 (ENSEASG00005016507) #35	RIT2 (ENSEASG00005031366) #36	PIK3C3 (ENSEASG00005016514) #37
Horse	MODERN SPECIES	29	ACAA2 (ENSECAG00000019394)	ENSECAG00000059774	LIPG (ENSECAG00000015140)	ENSECAG00000011547	C18orf32 (ENSECAG00000046374)	DYM (ENSECAG00000001651)	SMAD7 (ENSECAG00000020583)	CTIF (ENSECAG00000020473) #7	ZBTB7C (ENSECAG00000020456) #10	SMAD2 (ENSECAG00000015132) #11	SKOR2 (ENSECAG00000040113) #13	IER3IP1 (ENSECAG00000026829) #15	HDHD2 (ENSECAG00000012664) #16	ENSECAG00000010000 #17	KATNAL2 (ENSECAG00000010207) #21	PIAS2 (ENSECAG00000002816) #22	ST8SIA5 (ENSECAG00000023864) #23	LOXHD1 (ENSECAG00000022216) #24	RNF165 (ENSECAG00000021547) #25	ENSECAG00000031869	C18orf25 (ENSECAG00000020333)	HAUS1 (ENSECAG00000016553) #26	ATP5F1A (ENSECAG00000021561) #27	PSTPIP2 (ENSECAG00000019025) #29	EPG5 (ENSECAG00000002267) #30	SIGLEC15 (ENSECAG00000018025) #31	SLC14A1 (ENSECAG00000014487) #32	SLC14A2 (ENSECAG00000034918) #33	SETBP1 (ENSECAG00000019793) #34	SYT4 (ENSECAG00000017570) #35	RIT2 (ENSECAG00000016682) #36
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT01030000234539.a.a.b.b #22
Hedgehog	MODERN SPECIES	8411																PIAS2 (ENSEEUG00000005935) #22
Common shrew	MODERN SPECIES	6365																PIAS2 (ENSSARG00000008586) #22
Atlantogenata	ANCESTRAL SPECIES	22	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.a.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000164047.c.b	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Xenarthra	DUPLICATION
Xenarthra	ANCESTRAL SPECIES																	ENSGT01030000234539.a.a.b.b.fb #22
Sloth	MODERN SPECIES	7789																PIAS2 (ENSCHOG00000005911) #22
Armadillo	MODERN SPECIES	3631	TMEM229B (ENSDNOG00000032813)	ENSDNOG00000004245	PLEKHH1 (ENSDNOG00000004784)	PIGH (ENSDNOG00000004804)	ENSDNOG00000043235	ARG2 (ENSDNOG00000004808)	VTI1B (ENSDNOG00000003643)	RDH11 (ENSDNOG00000042867)	RDH12 (ENSDNOG00000003650)	ENSDNOG00000034723	ENSDNOG00000044979	RAD51B (ENSDNOG00000049492)	ZFP36L1 (ENSDNOG00000005159)	ENSDNOG00000048622	ACTN1 (ENSDNOG00000045722)	ENSDNOG00000042062 #22	DCAF5 (ENSDNOG00000018872)	EXD2 (ENSDNOG00000046970)	GALNT16 (ENSDNOG00000042275)	ERH (ENSDNOG00000034098)	SLC39A9 (ENSDNOG00000034206)	PLEKHD1 (ENSDNOG00000036900)	ENSDNOG00000012317	ENSDNOG00000039786	SUSD6 (ENSDNOG00000025953)	SRSF5 (ENSDNOG00000006160)	SLC10A1 (ENSDNOG00000006170)	ENSDNOG00000030920	SMOC1 (ENSDNOG00000007841)	SLC8A3 (ENSDNOG00000049755)
Xenarthra	ANCESTRAL SPECIES	212												ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b.gb #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33
Armadillo	MODERN SPECIES	4785												ENSDNOG00000025727 #13	IER3IP1 (ENSDNOG00000032201) #15	HDHD2 (ENSDNOG00000001000) #16	KATNAL2 (ENSDNOG00000001108) #21	ENSDNOG00000011855 #22	ST8SIA5 (ENSDNOG00000032248) #23	LOXHD1 (ENSDNOG00000005137) #24	RNF165 (ENSDNOG00000023586) #25	C18orf25 (ENSDNOG00000048603)	HAUS1 (ENSDNOG00000033685) #26	ENSDNOG00000006331 #27	PSTPIP2 (ENSDNOG00000037520) #29	ENSDNOG00000014995 #30	ENSDNOG00000035305 #30	SIGLEC15 (ENSDNOG00000014982) #31	SLC14A1 (ENSDNOG00000032760) #32	SLC14A2 (ENSDNOG00000017162) #33
Afrotheria	ANCESTRAL SPECIES	23	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000164047.c.b	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Afrotheria_a	ANCESTRAL SPECIES	22	ENSGT01100000263809	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.a.a.b.a.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000164047.c.b	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846 #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E.o.a #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36
Hyrax	MODERN SPECIES	7241																PIAS2 (ENSPCAG00000012046) #22
Elephant	MODERN SPECIES	375	MBD1 (ENSLAFG00000031328)	ENSLAFG00000015611	MYO5B (ENSLAFG00000015591)	ACAA2 (ENSLAFG00000022796)	LIPG (ENSLAFG00000003595)	RPL17 (ENSLAFG00000005569)	C18orf32 (ENSLAFG00000021351)	DYM (ENSLAFG00000017747)	SMAD7 (ENSLAFG00000008013)	CTIF (ENSLAFG00000016335) #7	ZBTB7C (ENSLAFG00000003436) #10	SMAD2 (ENSLAFG00000000143) #11	SKOR2 (ENSLAFG00000020778) #13	HDHD2 (ENSLAFG00000004419) #16	KATNAL2 (ENSLAFG00000004417) #21	PIAS2 (ENSLAFG00000018135) #22	ST8SIA5 (ENSLAFG00000010716) #23	LOXHD1 (ENSLAFG00000008500) #24	ENSLAFG00000030824	ENSLAFG00000008497 #25	C18orf25 (ENSLAFG00000013703)	ENSLAFG00000010897 #26	ENSLAFG00000031983 #26	ATP5F1A (ENSLAFG00000014779) #27	ENSLAFG00000002465 #29	EPG5 (ENSLAFG00000002464) #30	SLC14A1 (ENSLAFG00000009224) #32	SLC14A2 (ENSLAFG00000026942) #33	SETBP1 (ENSLAFG00000003458) #34	ENSLAFG00000012899	SYT4 (ENSLAFG00000010312) #35
Tenrec	MODERN SPECIES	7755																PIAS2 (ENSETEG00000019191) #22
Marsupialia	ANCESTRAL SPECIES	1	ENSGT01070000254624	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.b.b.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.e #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Opossum	DUPLICATION
Opossum	DUPLICATION
Opossum	MODERN SPECIES	2	LIPG (ENSMODG00000003564)	ENSMODG00000003534	C18orf32 (ENSMODG00000003518)	ENSMODG00000050373	DYM (ENSMODG00000003506)	SMAD7 (ENSMODG00000039523)	CTIF (ENSMODG00000003464) #7	ENSMODG00000046916	ZBTB7C (ENSMODG00000003412) #10	ENSMODG00000042470	SMAD2 (ENSMODG00000003393) #11	SKOR2 (ENSMODG00000003381) #13	IER3IP1 (ENSMODG00000037588) #15	HDHD2 (ENSMODG00000044379) #16	KATNAL2 (ENSMODG00000003358) #21	ENSMODG00000003324 #22	ENSMODG00000048012	ST8SIA5 (ENSMODG00000003305) #23	LOXHD1 (ENSMODG00000003285) #24	RNF165 (ENSMODG00000003260) #25	ENSMODG00000043074	C18orf25 (ENSMODG00000003250)	HAUS1 (ENSMODG00000003208) #26	ATP5F1A (ENSMODG00000003241) #27	PSTPIP2 (ENSMODG00000003193) #29	ENSMODG00000025419	EPG5 (ENSMODG00000025166) #30	ENSMODG00000003137 #31	ENSMODG00000040480 #32	ENSMODG00000045220 #32	SLC14A2 (ENSMODG00000045335) #33
Opossum	MODERN SPECIES	1	FAXC (ENSMODG00000018119)	FBXL4 (ENSMODG00000018121)	POU3F2 (ENSMODG00000018122)	ENSMODG00000039437	ENSMODG00000018124	MMS22L (ENSMODG00000018127)	KLHL32 (ENSMODG00000018129)	ENSMODG00000038074	GPR63 (ENSMODG00000018132)	ENSMODG00000018134	UFL1 (ENSMODG00000018137)	FUT9 (ENSMODG00000023384)	ENSMODG00000023385	MANEA (ENSMODG00000018142)	ENSMODG00000037917	ENSMODG00000046593 #22	EPHA7 (ENSMODG00000018150)	ENSMODG00000044142	ENSMODG00000018165	ENSMODG00000023387	MAP3K7 (ENSMODG00000018170)	BACH2 (ENSMODG00000018176)	GJA10 (ENSMODG00000018178)	CASP8AP2 (ENSMODG00000018180)	ENSMODG00000036973	MDN1 (ENSMODG00000018213)	LYRM2 (ENSMODG00000018270)	ANKRD6 (ENSMODG00000018273)	RRAGD (ENSMODG00000018275)	ENSMODG00000018277	GABRR2 (ENSMODG00000018278)
Opossum	MODERN SPECIES	2	B3GNT3 (ENSMODG00000019158)	FCHO1 (ENSMODG00000028655)	MAP1S (ENSMODG00000019153)	ENSMODG00000019151	NCLN (ENSMODG00000019149)	S1PR4 (ENSMODG00000019145)	GNA15 (ENSMODG00000019144)	GNA11 (ENSMODG00000019142)	ENSMODG00000019140	SCARB1 (ENSMODG00000015688)	DHX37 (ENSMODG00000015681)	ENSMODG00000048892	AACS (ENSMODG00000015672)	ENSMODG00000015657	ENSMODG00000050318	ENSMODG00000015653 #22	TMEM132C (ENSMODG00000015648)	SLC15A4 (ENSMODG00000015645)	ENSMODG00000037887	GLT1D1 (ENSMODG00000015634)	ENSMODG00000045547	FZD10 (ENSMODG00000015625)	PIWIL1 (ENSMODG00000015619)	ENSMODG00000045138	RIMBP2 (ENSMODG00000015603)	STX2 (ENSMODG00000015598)	ENSMODG00000036415	ENSMODG00000015591	ENSMODG00000028918	ENSMODG00000039509	SFSWAP (ENSMODG00000015581)
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT01070000254624	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.e #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.a.a.b	ENSGT00950000183010.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.e #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT01070000254624	ENSGT00940000155402.a.b	ENSGT01030000234626.D	ENSGT00940000159394	ENSGT00950000183010.a.b.a.a.a.b	ENSGT00390000018741	ENSGT00390000008772	ENSGT00940000159872	ENSGT00940000153432.A.b #7	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648 #15	ENSGT00940000155805 #16	ENSGT00940000157302 #21	ENSGT01030000234539.a.a.b.b #22	ENSGT01030000234535.C #23	ENSGT00390000018830 #24	ENSGT00940000156997 #25	ENSGT00390000016167	ENSGT00390000006029 #26	ENSGT00550000074846.e #27	ENSGT00940000158788 #29	ENSGT00390000007354 #30	ENSGT01080000257333.E #31	ENSGT00390000018729.a.a #32	ENSGT00390000018729.a.b #33	ENSGT00940000158784 #34	ENSGT00940000159026 #35	ENSGT00940000161402 #36	ENSGT00940000156943 #37
koala	MODERN SPECIES	22				LIPG (ENSPCIG00000028229)	ENSPCIG00000028230	C18orf32 (ENSPCIG00000032291)	DYM (ENSPCIG00000031532)	SMAD7 (ENSPCIG00000019168)	CTIF (ENSPCIG00000026247) #7	ZBTB7C (ENSPCIG00000015685) #10	SMAD2 (ENSPCIG00000015690) #11	SKOR2 (ENSPCIG00000006700) #13	IER3IP1 (ENSPCIG00000033187) #15	HDHD2 (ENSPCIG00000006706) #16	KATNAL2 (ENSPCIG00000006712) #21	PIAS2 (ENSPCIG00000006717) #22	ENSPCIG00000006722 #23	ENSPCIG00000006735 #24	RNF165 (ENSPCIG00000006802) #25	C18orf25 (ENSPCIG00000006809)	HAUS1 (ENSPCIG00000006819) #26	ENSPCIG00000006824 #27	ENSPCIG00000006831	PSTPIP2 (ENSPCIG00000026564) #29	EPG5 (ENSPCIG00000019029) #30	ENSPCIG00000019325 #31	SLC14A1 (ENSPCIG00000019326) #32	SLC14A2 (ENSPCIG00000019330) #33	ENSPCIG00000019335	ENSPCIG00000011742	SETBP1 (ENSPCIG00000011757) #34
Common wonbat	MODERN SPECIES	1028	ENSVURG00010000841	ENSVURG00010000828	MYO5B (ENSVURG00010000687)	ACAA2 (ENSVURG00010000570)	LIPG (ENSVURG00010000510)	C18orf32 (ENSVURG00010000458)	DYM (ENSVURG00010000407)	SMAD7 (ENSVURG00010000339)	CTIF (ENSVURG00010000308) #7	ZBTB7C (ENSVURG00010000266) #10	SMAD2 (ENSVURG00010000218) #11	SKOR2 (ENSVURG00010000155) #13	IER3IP1 (ENSVURG00010000126) #15	HDHD2 (ENSVURG00010000102) #16	KATNAL2 (ENSVURG00010022300) #21	PIAS2 (ENSVURG00010022283) #22	ST8SIA5 (ENSVURG00010022274) #23	ENSVURG00010022268 #24	ENSVURG00010022265 #24	RNF165 (ENSVURG00010022261) #25	C18orf25 (ENSVURG00010022255)	HAUS1 (ENSVURG00010022251) #26	ENSVURG00010022245 #27	PSTPIP2 (ENSVURG00010022237) #29	EPG5 (ENSVURG00010022212) #30	ENSVURG00010022201 #31	SLC14A1 (ENSVURG00010022183) #32	SLC14A2 (ENSVURG00010022169) #33	ENSVURG00010022157	SETBP1 (ENSVURG00010022154) #34	ENSVURG00010022140
Wallaby	MODERN SPECIES	180																ENSMEUG00000013788 #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000010062	ENSSHAG00000003364	ACAA2 (ENSSHAG00000001241)	LIPG (ENSSHAG00000004911)	ENSSHAG00000003060	ENSSHAG00000030929	DYM (ENSSHAG00000001181)	SMAD7 (ENSSHAG00000017444)	CTIF (ENSSHAG00000027815) #7	ZBTB7C (ENSSHAG00000024277) #10	SMAD2 (ENSSHAG00000012837) #11	ENSSHAG00000012107	SKOR2 (ENSSHAG00000025447) #13	HDHD2 (ENSSHAG00000024217) #16	KATNAL2 (ENSSHAG00000003042) #21	PIAS2 (ENSSHAG00000005954) #22	ST8SIA5 (ENSSHAG00000021657) #23	ENSSHAG00000017868 #24	RNF165 (ENSSHAG00000017805) #25	C18orf25 (ENSSHAG00000017414)	HAUS1 (ENSSHAG00000030289) #26	ENSSHAG00000017177 #27	PSTPIP2 (ENSSHAG00000017036) #29	EPG5 (ENSSHAG00000016721) #30	ENSSHAG00000016659 #31	SLC14A1 (ENSSHAG00000032087) #32	SLC14A2 (ENSSHAG00000016114) #33	SETBP1 (ENSSHAG00000011290) #34	SYT4 (ENSSHAG00000030482) #35	RIT2 (ENSSHAG00000027427) #36	ENSSHAG00000030977
Platypus	MODERN SPECIES	14	ENSOANG00000008126	MYO5B (ENSOANG00000008127)	ACAA2 (ENSOANG00000002559)	LIPG (ENSOANG00000001131)	ENSOANG00000002910	DYM (ENSOANG00000007612)	ENSOANG00000007611	CTIF (ENSOANG00000001337) #7	ZBTB7C (ENSOANG00000005929) #10	SMAD2 (ENSOANG00000001971) #11	SKOR2 (ENSOANG00000038832) #13	IER3IP1 (ENSOANG00000045983) #15	ENSOANG00000042577	HDHD2 (ENSOANG00000012019) #16	KATNAL2 (ENSOANG00000012018) #21	PIAS2 (ENSOANG00000012017) #22	ST8SIA5 (ENSOANG00000014835) #23	LOXHD1 (ENSOANG00000014833) #24	RNF165 (ENSOANG00000014831) #25	C18orf25 (ENSOANG00000004994)	ENSOANG00000048405	UBAP2 (ENSOANG00000010219)	UBE2R2 (ENSOANG00000036151)	NOL6 (ENSOANG00000010217)	AQP3 (ENSOANG00000014661)	ENSOANG00000045749	TPGS2 (ENSOANG00000004563)	ENSOANG00000021740	ENSOANG00000045275	ENSOANG00000045452	ENSOANG00000038440