Mus	ANCESTRAL SPECIES	3	ENSGT00940000157719 #8	ENSGT00730000111138 #9	ENSGT00390000007284 #10	ENSGT00950000182919.A #11	ENSGT00940000155184 #12	ENSGT00940000162208 #13	ENSGT00390000011769 #14	ENSGT00940000157179 #15	ENSGT00390000001627	ENSGT00950000183001.a.b.a #16	ENSGT00950000183028.a.a.b #17	ENSGT00390000002112 #18	ENSGT00940000155095 #19	ENSGT00390000016054.a #20	ENSGT00940000160189 #21	ENSGT00940000157785 #22	ENSGT00940000158228.a #23	ENSGT01090000260070.D #24	ENSGT00620000088063 #25	ENSGT00550000074802 #26	ENSGT00390000002957 #27	ENSGT00940000155887 #28	ENSGT00950000183031.A.a.b #30	ENSGT00940000156652 #31	ENSGT00940000156864 #32	ENSGT00940000158591 #33	ENSGT00390000003365 #34	ENSGT00940000160519 #35	ENSGT00530000063881.a.a #36	ENSGT00940000156953 #37	ENSGT01060000248564.a.a
Mus_A	ANCESTRAL SPECIES	3	ENSGT00940000157719 #8	ENSGT00730000111138 #9	ENSGT00390000007284 #10	ENSGT00950000182919.A #11	ENSGT00940000155184 #12	ENSGT00940000162208 #13	ENSGT00390000011769 #14	ENSGT00940000157179 #15	ENSGT00390000001627	ENSGT00950000183001.a.b.a #16	ENSGT00950000183028.a.a.b #17	ENSGT00390000002112 #18	ENSGT00940000155095 #19	ENSGT00390000016054.a #20	ENSGT00940000160189 #21	ENSGT00940000157785 #22	ENSGT00940000158228.a #23	ENSGT01090000260070.D #24	ENSGT00620000088063 #25	ENSGT00550000074802 #26	ENSGT00390000002957 #27	ENSGT00940000155887 #28	ENSGT00950000183031.A.a.b #30	ENSGT00940000156652 #31	ENSGT00940000156864 #32	ENSGT00940000158591 #33	ENSGT00390000003365 #34	ENSGT00940000160519 #35	ENSGT00530000063881.a.a #36	ENSGT00940000156953 #37	ENSGT01060000248564.a.a
Mus_B	ANCESTRAL SPECIES	22	ENSGT00940000157719 #8	ENSGT00730000111138 #9	ENSGT00390000007284 #10	ENSGT00950000182919.A #11	ENSGT00940000155184 #12	ENSGT00940000162208 #13	ENSGT00390000011769 #14	ENSGT00940000157179 #15	ENSGT00390000001627	ENSGT00950000183001.a.b.a #16	ENSGT00950000183028.a.a.b #17	ENSGT00390000002112 #18	ENSGT00940000155095 #19	ENSGT00390000016054.a #20	ENSGT00940000160189 #21	ENSGT00940000157785 #22	ENSGT00940000158228.a #23	ENSGT01090000260070.D #24	ENSGT00620000088063 #25	ENSGT00550000074802 #26	ENSGT00390000002957 #27	ENSGT00940000155887 #28	ENSGT00950000183031.A.a.b #30	ENSGT00940000156652 #31	ENSGT00940000156864 #32	ENSGT00940000158591 #33	ENSGT00390000003365 #34	ENSGT00940000160519 #35	ENSGT00530000063881.a.a #36	ENSGT00940000156953 #37	ENSGT01060000248564.a.a
Mus_C	ANCESTRAL SPECIES	2	ENSGT00940000157719 #8	ENSGT00730000111138 #9	ENSGT00390000007284 #10	ENSGT00950000182919.A #11	ENSGT00940000155184 #12	ENSGT00940000162208 #13	ENSGT00390000011769 #14	ENSGT00940000157179 #15	ENSGT00390000001627	ENSGT00950000183001.a.b.a #16	ENSGT00950000183028.a.a.b #17	ENSGT00390000002112 #18	ENSGT00940000155095 #19	ENSGT00390000016054.a #20	ENSGT00940000160189 #21	ENSGT00940000157785 #22	ENSGT00940000158228.a #23	ENSGT01090000260070.D #24	ENSGT00620000088063 #25	ENSGT00550000074802 #26	ENSGT00390000002957 #27	ENSGT00940000155887 #28	ENSGT00950000183031.A.a.b #30	ENSGT00940000156652 #31	ENSGT00940000156864 #32	ENSGT00940000158591 #33	ENSGT00390000003365 #34	ENSGT00940000160519 #35	ENSGT00530000063881.a.a #36	ENSGT00940000156953 #37	ENSGT01060000248564.a.a
spretus	MODERN SPECIES	13	Tstd3 (MGP_SPRETEiJ_G0026794) #7	Usp45 (MGP_SPRETEiJ_G0026795) #8	Pnisr (MGP_SPRETEiJ_G0026796) #9	Coq3 (MGP_SPRETEiJ_G0026797) #10	Faxc (MGP_SPRETEiJ_G0026798) #11	Fbxl4 (MGP_SPRETEiJ_G0026799) #12	Pou3f2 (MGP_SPRETEiJ_G0026800) #13	Mms22l (MGP_SPRETEiJ_G0026801) #14	Klhl32 (MGP_SPRETEiJ_G0026802) #15	Gpr63 (MGP_SPRETEiJ_G0026803) #16	Fhl5 (MGP_SPRETEiJ_G0026804) #17	Ufl1 (MGP_SPRETEiJ_G0026805) #18	Fut9 (MGP_SPRETEiJ_G0026806) #19	Manea (MGP_SPRETEiJ_G0026807) #20	Epha7 (MGP_SPRETEiJ_G0026808) #21	Map3k7 (MGP_SPRETEiJ_G0026809) #22	Bach2 (MGP_SPRETEiJ_G0026810) #23	Gja10 (MGP_SPRETEiJ_G0026811) #24	Casp8ap2 (MGP_SPRETEiJ_G0026812) #25	Mdn1 (MGP_SPRETEiJ_G0026813) #26	Lyrm2 (MGP_SPRETEiJ_G0026814) #27	Ankrd6 (MGP_SPRETEiJ_G0026815) #28	MGP_SPRETEiJ_G0026816 #29	Rragd (MGP_SPRETEiJ_G0026817) #30	Ube2j1 (MGP_SPRETEiJ_G0026818) #31	Gabrr2 (MGP_SPRETEiJ_G0026819) #32	Gabrr1 (MGP_SPRETEiJ_G0026820) #33	Pm20d2 (MGP_SPRETEiJ_G0026821) #34	MGP_SPRETEiJ_G0026822 #35	Pnrc1 (MGP_SPRETEiJ_G0026823) #36	Rngtt (MGP_SPRETEiJ_G0026824) #37
Steppe mouse	MODERN SPECIES	3209															ENSMSIG00000013916	Map3k7 (ENSMSIG00000013484) #22	ENSMSIG00000013456	Bach2 (ENSMSIG00000013426) #23	Gja10 (ENSMSIG00000013412) #24	ENSMSIG00000013406	Casp8ap2 (ENSMSIG00000013344) #25	Mdn1 (ENSMSIG00000012916) #26	Lyrm2 (ENSMSIG00000012903) #27	Ankrd6 (ENSMSIG00000012558) #28	Rragd (ENSMSIG00000012502) #30	Ube2j1 (ENSMSIG00000012466) #31	Gabrr2 (ENSMSIG00000012448) #32	Gabrr1 (ENSMSIG00000012428) #33	Pm20d2 (ENSMSIG00000012399) #34	Srsf12 (ENSMSIG00000012381) #35	Pnrc1 (ENSMSIG00000012374) #36
Mouse	MODERN SPECIES	13	Usp45 (ENSMUSG00000040455) #8	Pnisr (ENSMUSG00000028248) #9	Coq3 (ENSMUSG00000028247) #10	Faxc (ENSMUSG00000028246) #11	Fbxl4 (ENSMUSG00000040410) #12	Pou3f2 (ENSMUSG00000095139) #13	Mms22l (ENSMUSG00000045751) #14	Klhl32 (ENSMUSG00000040387) #15	Ndufaf4 (ENSMUSG00000028261)	Gpr63 (ENSMUSG00000040372) #16	Fhl5 (ENSMUSG00000028259) #17	Ufl1 (ENSMUSG00000040359) #18	Fut9 (ENSMUSG00000055373) #19	Manea (ENSMUSG00000040520) #20	Epha7 (ENSMUSG00000028289) #21	Map3k7 (ENSMUSG00000028284) #22	Bach2 (ENSMUSG00000040270) #23	Gja10 (ENSMUSG00000051056) #24	Casp8ap2 (ENSMUSG00000028282) #25	Mdn1 (ENSMUSG00000058006) #26	Lyrm2 (ENSMUSG00000045854) #27	Ankrd6 (ENSMUSG00000040183) #28	Rragd (ENSMUSG00000028278) #30	Ube2j1 (ENSMUSG00000028277) #31	Gabrr2 (ENSMUSG00000023267) #32	Gabrr1 (ENSMUSG00000028280) #33	Pm20d2 (ENSMUSG00000054659) #34	Srsf12 (ENSMUSG00000054679) #35	Pnrc1 (ENSMUSG00000040128) #36	Rngtt (ENSMUSG00000028274) #37	Cnr1 (ENSMUSG00000044288)
Ryukyu mouse	MODERN SPECIES	13	Usp45 (MGP_CAROLIEiJ_G0025846) #8	Pnisr (MGP_CAROLIEiJ_G0025847) #9	Coq3 (MGP_CAROLIEiJ_G0025848) #10	Faxc (MGP_CAROLIEiJ_G0025849) #11	Fbxl4 (MGP_CAROLIEiJ_G0025850) #12	Pou3f2 (MGP_CAROLIEiJ_G0025851) #13	Mms22l (MGP_CAROLIEiJ_G0025852) #14	Klhl32 (MGP_CAROLIEiJ_G0025853) #15	Ndufaf4 (MGP_CAROLIEiJ_G0025854)	Gpr63 (MGP_CAROLIEiJ_G0025855) #16	Fhl5 (MGP_CAROLIEiJ_G0025856) #17	Ufl1 (MGP_CAROLIEiJ_G0025857) #18	Fut9 (MGP_CAROLIEiJ_G0025858) #19	Manea (MGP_CAROLIEiJ_G0025859) #20	Epha7 (MGP_CAROLIEiJ_G0025860) #21	Map3k7 (MGP_CAROLIEiJ_G0025861) #22	Bach2 (MGP_CAROLIEiJ_G0025862) #23	Gja10 (MGP_CAROLIEiJ_G0025863) #24	Casp8ap2 (MGP_CAROLIEiJ_G0025864) #25	Mdn1 (MGP_CAROLIEiJ_G0025865) #26	Lyrm2 (MGP_CAROLIEiJ_G0025866) #27	Ankrd6 (MGP_CAROLIEiJ_G0025867) #28	Rragd (MGP_CAROLIEiJ_G0025868) #30	Ube2j1 (MGP_CAROLIEiJ_G0025869) #31	Gabrr2 (MGP_CAROLIEiJ_G0025870) #32	Gabrr1 (MGP_CAROLIEiJ_G0025871) #33	Pm20d2 (MGP_CAROLIEiJ_G0025872) #34	MGP_CAROLIEiJ_G0025873 #35	Pnrc1 (MGP_CAROLIEiJ_G0025874) #36	Rngtt (MGP_CAROLIEiJ_G0025875) #37	Cnr1 (MGP_CAROLIEiJ_G0025876)
Shrew mouse	MODERN SPECIES	14	Usp45 (MGP_PahariEiJ_G0023969) #8	Pnisr (MGP_PahariEiJ_G0023970) #9	Coq3 (MGP_PahariEiJ_G0023971) #10	Faxc (MGP_PahariEiJ_G0023972) #11	Fbxl4 (MGP_PahariEiJ_G0023973) #12	Pou3f2 (MGP_PahariEiJ_G0023974) #13	Mms22l (MGP_PahariEiJ_G0023975) #14	Klhl32 (MGP_PahariEiJ_G0023976) #15	Ndufaf4 (MGP_PahariEiJ_G0023977)	Gpr63 (MGP_PahariEiJ_G0023978) #16	Fhl5 (MGP_PahariEiJ_G0023979) #17	Ufl1 (MGP_PahariEiJ_G0023980) #18	Fut9 (MGP_PahariEiJ_G0023981) #19	Manea (MGP_PahariEiJ_G0023982) #20	Epha7 (MGP_PahariEiJ_G0023983) #21	Map3k7 (MGP_PahariEiJ_G0023984) #22	Bach2 (MGP_PahariEiJ_G0023985) #23	Gja10 (MGP_PahariEiJ_G0023986) #24	Casp8ap2 (MGP_PahariEiJ_G0023987) #25	Mdn1 (MGP_PahariEiJ_G0023988) #26	Lyrm2 (MGP_PahariEiJ_G0023989) #27	Ankrd6 (MGP_PahariEiJ_G0023990) #28	Rragd (MGP_PahariEiJ_G0023991) #30	Ube2j1 (MGP_PahariEiJ_G0023992) #31	Gabrr2 (MGP_PahariEiJ_G0023993) #32	Gabrr1 (MGP_PahariEiJ_G0023994) #33	Pm20d2 (MGP_PahariEiJ_G0023995) #34	MGP_PahariEiJ_G0023996 #35	Pnrc1 (MGP_PahariEiJ_G0023997) #36	Rngtt (MGP_PahariEiJ_G0023998) #37	Cnr1 (MGP_PahariEiJ_G0023999)