Glires	ANCESTRAL SPECIES		ENSGT01030000234531.A.b.b.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000000617	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36
Rodentia	ANCESTRAL SPECIES		ENSGT01030000234531.A.b.b.b.e.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Rodentia_A	ANCESTRAL SPECIES		ENSGT01030000234531.A.b.b.b.e.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Hystricomorpha	ANCESTRAL SPECIES	4	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.g.b	ENSGT00940000157630.g.a	ENSGT00940000157630.h	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00940000160527.f	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36
Hystricomorpha_a	ANCESTRAL SPECIES	1	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.g.b	ENSGT00940000157630.g.a	ENSGT00940000157630.h	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00940000160527.f	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36
Hystricomorpha_b	ANCESTRAL SPECIES	47		ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.g.b	ENSGT00940000157630.g.a.a	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00940000160527.f	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36
Degu	MODERN SPECIES	154					ENSODEG00000014725 #11	DHRS3 (ENSODEG00000013556) #12	VPS13D (ENSODEG00000013523) #13	TNFRSF1B (ENSODEG00000013661) #14	MIIP (ENSODEG00000012969) #15	MFN2 (ENSODEG00000015359) #16	PLOD1 (ENSODEG00000013340) #17	KIAA2013 (ENSODEG00000013918) #18	NPPA (ENSODEG00000013314) #19	ENSODEG00000012795 #20	CLCN6 (ENSODEG00000013643) #21	MTHFR (ENSODEG00000013407) #22	AGTRAP (ENSODEG00000014964) #23	MAD2L2 (ENSODEG00000014183) #24	FBXO6 (ENSODEG00000012870) #25	FBXO44 (ENSODEG00000013642) #26	FBXO2 (ENSODEG00000014000) #27	DISP3 (ENSODEG00000013940) #28	UBIAD1 (ENSODEG00000012730) #29	ANGPTL7 (ENSODEG00000014472) #30	MTOR (ENSODEG00000013301) #31	EXOSC10 (ENSODEG00000013285) #32	ENSODEG00000013268 #33	MASP2 (ENSODEG00000012547) #34	ENSODEG00000014886 #35	ENSODEG00000013739 #36	ENSODEG00000012561 #37
Long-tailed chinchilla	MODERN SPECIES	193	CFAP107 (ENSCLAG00000005264)	AADACL3 (ENSCLAG00000005582)	ENSCLAG00000005674	ENSCLAG00000005781	ENSCLAG00000006201	DHRS3 (ENSCLAG00000005004) #12	VPS13D (ENSCLAG00000006701) #13	TNFRSF1B (ENSCLAG00000017193) #14	ENSCLAG00000011220	MIIP (ENSCLAG00000008183) #15	MFN2 (ENSCLAG00000009293) #16	KIAA2013 (ENSCLAG00000012083) #18	PLOD1 (ENSCLAG00000013276) #17	NPPA (ENSCLAG00000011401) #19	CLCN6 (ENSCLAG00000008993) #21	MTHFR (ENSCLAG00000004974) #22	AGTRAP (ENSCLAG00000005252) #23	ENSCLAG00000005422	DRAXIN (ENSCLAG00000005857)	MAD2L2 (ENSCLAG00000004348) #24	FBXO6 (ENSCLAG00000004528) #25	FBXO44 (ENSCLAG00000006164) #26	FBXO2 (ENSCLAG00000006915) #27	DISP3 (ENSCLAG00000007721) #28	UBIAD1 (ENSCLAG00000008367) #29	MTOR (ENSCLAG00000009558) #31	ANGPTL7 (ENSCLAG00000004999) #30	EXOSC10 (ENSCLAG00000005283) #32	SRM (ENSCLAG00000006477) #33	ENSCLAG00000013688 #34	TARDBP (ENSCLAG00000014547) #36
Guinea pig	MODERN SPECIES	25	CFAP107 (ENSCPOG00000003643)	AADACL3 (ENSCPOG00000000228)	ENSCPOG00000011374	ENSCPOG00000015038	ENSCPOG00000010237	DHRS3 (ENSCPOG00000001600) #12	VPS13D (ENSCPOG00000010440) #13	TNFRSF1B (ENSCPOG00000020299) #14	ENSCPOG00000009191	MIIP (ENSCPOG00000032652) #15	MFN2 (ENSCPOG00000006834) #16	PLOD1 (ENSCPOG00000020909) #17	KIAA2013 (ENSCPOG00000022694) #18	NPPA (ENSCPOG00000019564) #19	CLCN6 (ENSCPOG00000003508) #21	MTHFR (ENSCPOG00000002899) #22	AGTRAP (ENSCPOG00000030800) #23	ENSCPOG00000004934	DRAXIN (ENSCPOG00000014214)	FBXO6 (ENSCPOG00000037191) #25	MAD2L2 (ENSCPOG00000022099) #24	FBXO44 (ENSCPOG00000026240) #26	FBXO2 (ENSCPOG00000012611) #27	DISP3 (ENSCPOG00000007061) #28	UBIAD1 (ENSCPOG00000034388) #29	MTOR (ENSCPOG00000011641) #31	ANGPTL7 (ENSCPOG00000036774) #30	EXOSC10 (ENSCPOG00000011628) #32	SRM (ENSCPOG00000013039) #33	ENSCPOG00000011622 #34	TARDBP (ENSCPOG00000011619) #36
Naked mole-rat female	MODERN SPECIES	26	ENSHGLG00000008970	ENSHGLG00000020636	ENSHGLG00000009925	DHRS3 (ENSHGLG00000010111) #12	VPS13D (ENSHGLG00000010579) #13	TNFRSF1B (ENSHGLG00000010937) #14	ENSHGLG00000038264	TNFRSF8 (ENSHGLG00000041237)	MIIP (ENSHGLG00000011300) #15	MFN2 (ENSHGLG00000011663) #16	ENSHGLG00000040198 #17	ENSHGLG00000011999 #17	KIAA2013 (ENSHGLG00000034219) #18	NPPA (ENSHGLG00000044156) #19	CLCN6 (ENSHGLG00000018621) #21	MTHFR (ENSHGLG00000008468) #22	AGTRAP (ENSHGLG00000008515) #23	ENSHGLG00000049192	DRAXIN (ENSHGLG00000008579)	MAD2L2 (ENSHGLG00000008925) #24	FBXO6 (ENSHGLG00000009269) #25	FBXO44 (ENSHGLG00000009682) #26	FBXO2 (ENSHGLG00000046459) #27	UBIAD1 (ENSHGLG00000044652) #29	ANGPTL7 (ENSHGLG00000011558) #30	MTOR (ENSHGLG00000010894) #31	EXOSC10 (ENSHGLG00000011944) #32	SRM (ENSHGLG00000038425) #33	MASP2 (ENSHGLG00000012346) #34	TARDBP (ENSHGLG00000049503) #36	C1orf127 (ENSHGLG00000019469) #37
Sciuridae	ANCESTRAL SPECIES	3	ENSGT01030000234531.A.b.b.b.f.b.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Marmotini	ANCESTRAL SPECIES		ENSGT00940000162571	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.c	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Alpin marmot	MODERN SPECIES	73				CFAP107 (ENSMMMG00000016358)	AADACL3 (ENSMMMG00000016361)	AADACL4 (ENSMMMG00000016366)	DHRS3 (ENSMMMG00000016372) #12	VPS13D (ENSMMMG00000016395) #13	TNFRSF1B (ENSMMMG00000016525) #14	TNFRSF8 (ENSMMMG00000016534)	MFN2 (ENSMMMG00000016567) #16	PLOD1 (ENSMMMG00000016602) #17	ENSMMMG00000016621 ##19	NPPA (ENSMMMG00000016626) #19	CLCN6 (ENSMMMG00000016637) #21	MTHFR (ENSMMMG00000016671) #22	AGTRAP (ENSMMMG00000016693) #23	DRAXIN (ENSMMMG00000016699)	MAD2L2 (ENSMMMG00000016711) #24	FBXO6 (ENSMMMG00000016731) #25	FBXO44 (ENSMMMG00000016734) #26	FBXO2 (ENSMMMG00000016755) #27	DISP3 (ENSMMMG00000016764) #28	UBIAD1 (ENSMMMG00000016787) #29	MTOR (ENSMMMG00000016791) #31	ANGPTL7 (ENSMMMG00000016833) #30	EXOSC10 (ENSMMMG00000016839) #32	MASP2 (ENSMMMG00000016862) #34	TARDBP (ENSMMMG00000016883) #36	CASZ1 (ENSMMMG00000016947)	PEX14 (ENSMMMG00000016957)
Marmotini_b	ANCESTRAL SPECIES		ENSGT00940000162571	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630.c	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Arctic ground squirrel	MODERN SPECIES	192	ENSUPAG00010004689	AADACL3 (ENSUPAG00010004684)	ENSUPAG00010004670	ENSUPAG00010004669	DHRS3 (ENSUPAG00010004636) #12	VPS13D (ENSUPAG00010003922) #13	TNFRSF1B (ENSUPAG00010003884) #14	TNFRSF8 (ENSUPAG00010003869)	MIIP (ENSUPAG00010003861) #15	MFN2 (ENSUPAG00010003824) #16	PLOD1 (ENSUPAG00010003800) #17	KIAA2013 (ENSUPAG00010003792) #18	ENSUPAG00010003781 ##19	NPPA (ENSUPAG00010003768) #19	CLCN6 (ENSUPAG00010003705) #21	MTHFR (ENSUPAG00010003678) #22	ENSUPAG00010003642	DRAXIN (ENSUPAG00010003632)	MAD2L2 (ENSUPAG00010003610) #24	FBXO6 (ENSUPAG00010003574) #25	FBXO2 (ENSUPAG00010003569) #27	DISP3 (ENSUPAG00010003537) #28	UBIAD1 (ENSUPAG00010003527) #29	ANGPTL7 (ENSUPAG00010003518) #30	MTOR (ENSUPAG00010003456) #31	EXOSC10 (ENSUPAG00010003379) #32	SRM (ENSUPAG00010003367) #33	MASP2 (ENSUPAG00010003336) #34	TARDBP (ENSUPAG00010003294) #36	ENSUPAG00010003274 #37	CASZ1 (ENSUPAG00010003214)
Squirrel	MODERN SPECIES	74	PDPN (ENSSTOG00000032629)	LRRC38 (ENSSTOG00000023111)	CFAP107 (ENSSTOG00000009816)	AADACL3 (ENSSTOG00000007059)	AADACL4 (ENSSTOG00000019534)	DHRS3 (ENSSTOG00000016015) #12	VPS13D (ENSSTOG00000005519) #13	TNFRSF1B (ENSSTOG00000024605) #14	MIIP (ENSSTOG00000024734) #15	MFN2 (ENSSTOG00000005705) #16	PLOD1 (ENSSTOG00000009927) #17	KIAA2013 (ENSSTOG00000027586) #18	NPPB (ENSSTOG00000020778) ##19	ENSSTOG00000007663 #19	CLCN6 (ENSSTOG00000007614) #21	MTHFR (ENSSTOG00000007591) #22	AGTRAP (ENSSTOG00000030212) #23	DRAXIN (ENSSTOG00000001281)	MAD2L2 (ENSSTOG00000009961) #24	FBXO6 (ENSSTOG00000009949) #25	FBXO44 (ENSSTOG00000009941) #26	FBXO2 (ENSSTOG00000025486) #27	DISP3 (ENSSTOG00000009265) #28	UBIAD1 (ENSSTOG00000022240) #29	ANGPTL7 (ENSSTOG00000005589) #30	MTOR (ENSSTOG00000005494) #31	EXOSC10 (ENSSTOG00000005459) #32	SRM (ENSSTOG00000024798) #33	MASP2 (ENSSTOG00000024417) #34	ENSSTOG00000008406 #36
Eurasian red squirrel	MODERN SPECIES		AADACL3 (ENSSVLG00005007922)	ENSSVLG00005007846	ENSSVLG00005007795	DHRS3 (ENSSVLG00005007738) #12	VPS13D (ENSSVLG00005007158) #13	TNFRSF1B (ENSSVLG00005006983) #14	ENSSVLG00005006934	TNFRSF8 (ENSSVLG00005006831)	MIIP (ENSSVLG00005006797) #15	MFN2 (ENSSVLG00005006764) #16	PLOD1 (ENSSVLG00005006729) #17	KIAA2013 (ENSSVLG00005006695) #18	NPPB (ENSSVLG00005006653) ##19	NPPA (ENSSVLG00005006599) #19	CLCN6 (ENSSVLG00005006533) #21	MTHFR (ENSSVLG00005006411) #22	AGTRAP (ENSSVLG00005006342) #23	DRAXIN (ENSSVLG00005006297)	MAD2L2 (ENSSVLG00005006268) #24	FBXO6 (ENSSVLG00005006238) #25	FBXO44 (ENSSVLG00005006188) #26	FBXO2 (ENSSVLG00005006137) #27	DISP3 (ENSSVLG00005006030) #28	UBIAD1 (ENSSVLG00005005985) #29	ANGPTL7 (ENSSVLG00005005951) #30	ENSSVLG00005005854 #31	EXOSC10 (ENSSVLG00005005780) #32	SRM (ENSSVLG00005005741) #33	MASP2 (ENSSVLG00005005634) #34	ENSSVLG00005005604	ENSSVLG00005005484 #36
Rodentia_B	ANCESTRAL SPECIES		ENSGT01030000234531.A.b.b.b.e.b	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Myomorpha	ANCESTRAL SPECIES	3	ENSGT00940000162160	ENSGT00940000157630.b.a	ENSGT00940000157630.b.b	ENSGT00940000157630.a	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Muroidea	ANCESTRAL SPECIES	3	ENSGT00940000157630.b.a	ENSGT00940000157630.b.b	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Muroidea_A	ANCESTRAL SPECIES	3	ENSGT00940000163565	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.a.a	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Cricetidae	ANCESTRAL SPECIES	2	ENSGT00940000163565	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.a.a	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Cricetinae	ANCESTRAL SPECIES	5	ENSGT00940000157630.b.a	ENSGT00940000157630.b.b	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Golden Hamster	MODERN SPECIES	707	ENSMAUG00000011542	Aadacl4fm4 (ENSMAUG00000008456)	ENSMAUG00000001063	ENSMAUG00000022203	Dhrs3 (ENSMAUG00000014881) #12	Vps13d (ENSMAUG00000003081) #13	Tnfrsf1b (ENSMAUG00000009639) #14	Tnfrsf8 (ENSMAUG00000009810)	Miip (ENSMAUG00000020135) #15	Mfn2 (ENSMAUG00000008664) #16	Plod1 (ENSMAUG00000021152) #17	2510039O18Rik (ENSMAUG00000021494) #18	Nppb (ENSMAUG00000020459) ##19	Nppa (ENSMAUG00000010723) #19	Clcn6 (ENSMAUG00000018198) #21	Mthfr (ENSMAUG00000009132) #22	Agtrap (ENSMAUG00000020679) #23	Draxin (ENSMAUG00000020626)	Mad2l2 (ENSMAUG00000020093) #24	Fbxo6 (ENSMAUG00000007924) #25	Fbxo44 (ENSMAUG00000020389) #26	Fbxo2 (ENSMAUG00000018402) #27	Disp3 (ENSMAUG00000021137) #28	Ubiad1 (ENSMAUG00000021900) #29	Angptl7 (ENSMAUG00000008434) #30	Mtor (ENSMAUG00000015520) #31	Exosc10 (ENSMAUG00000019261) #32	Srm (ENSMAUG00000005303) #33	Masp2 (ENSMAUG00000018129) #34	Tardbp (ENSMAUG00000018057) #36	Gm572 (ENSMAUG00000018091) #37
Chinese hamster chok1gshd	MODERN SPECIES	111	ENSCGRG00001024601	Aadacl4 (ENSCGRG00001021022)	Aadacl4fm4 (ENSCGRG00001018913)	Dhrs3 (ENSCGRG00001012549) #12	Vps13d (ENSCGRG00001023868) #13	Tnfrsf1b (ENSCGRG00001006800) #14	Tnfrsf8 (ENSCGRG00001020934)	Miip (ENSCGRG00001007967) #15	Mfn2 (ENSCGRG00001012340) #16	Plod1 (ENSCGRG00001021872) #17	2510039O18Rik (ENSCGRG00001020171) #18	ENSCGRG00001019462	Nppb (ENSCGRG00001019165) ##19	Nppa (ENSCGRG00001002441) #19	Clcn6 (ENSCGRG00001020204) #21	Mthfr (ENSCGRG00001015921) #22	Agtrap (ENSCGRG00001010884) #23	Draxin (ENSCGRG00001002528)	Mad2l2 (ENSCGRG00001023601) #24	Fbxo6 (ENSCGRG00001023002) #25	Fbxo44 (ENSCGRG00001025034) #26	Fbxo2 (ENSCGRG00001024819) #27	Disp3 (ENSCGRG00001017925) #28	Ubiad1 (ENSCGRG00001017029) #29	Angptl7 (ENSCGRG00001011013) #30	Mtor (ENSCGRG00001002776) #31	Exosc10 (ENSCGRG00001018469) #32	Srm (ENSCGRG00001014410) #33	Masp2 (ENSCGRG00001000129) #34	ENSCGRG00001010684 #36	Gm572 (ENSCGRG00001023278) #37
Cricetidae_B	ANCESTRAL SPECIES	30	ENSGT00940000163565	ENSGT00940000157630.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.a.a	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Prairie vole	MODERN SPECIES	1	ENSMOCG00000020825	Aadacl4 (ENSMOCG00000004268)	Aadacl4fm4 (ENSMOCG00000019793)	ENSMOCG00000017314	Dhrs3 (ENSMOCG00000015852) #12	Vps13d (ENSMOCG00000021798) #13	Tnfrsf1b (ENSMOCG00000011772) #14	Tnfrsf8 (ENSMOCG00000013428)	Miip (ENSMOCG00000012534) #15	Mfn2 (ENSMOCG00000018675) #16	Plod1 (ENSMOCG00000012299) #17	2510039O18Rik (ENSMOCG00000016570) #18	Nppb (ENSMOCG00000008405) ##19	Nppa (ENSMOCG00000001019) #19	Clcn6 (ENSMOCG00000012565) #21	Mthfr (ENSMOCG00000019463) #22	Agtrap (ENSMOCG00000019967) #23	Draxin (ENSMOCG00000011466)	Mad2l2 (ENSMOCG00000002384) #24	Fbxo6 (ENSMOCG00000015460) #25	Fbxo44 (ENSMOCG00000013706) #26	Fbxo2 (ENSMOCG00000009707) #27	Disp3 (ENSMOCG00000006269) #28	Ubiad1 (ENSMOCG00000005693) #29	Angptl7 (ENSMOCG00000006554) #30	Mtor (ENSMOCG00000009089) #31	Exosc10 (ENSMOCG00000016509) #32	Srm (ENSMOCG00000020611) #33	ENSMOCG00000010303	Masp2 (ENSMOCG00000018202) #34	Tardbp (ENSMOCG00000003562) #36
Northern American deer mouse	MODERN SPECIES	11	Aadacl4 (ENSPEMG00000019539)	Aadacl4fm4 (ENSPEMG00000019566)	ENSPEMG00000019585	ENSPEMG00000029073	Dhrs3 (ENSPEMG00000019609) #12	Vps13d (ENSPEMG00000019865) #13	Tnfrsf1b (ENSPEMG00000019981) #14	Tnfrsf8 (ENSPEMG00000020050)	Miip (ENSPEMG00000020072) #15	Mfn2 (ENSPEMG00000020166) #16	Plod1 (ENSPEMG00000000181) #17	2510039O18Rik (ENSPEMG00000020159) #18	Nppb (ENSPEMG00000020191) ##19	Nppa (ENSPEMG00000020200) #19	Clcn6 (ENSPEMG00000000154) #21	Mthfr (ENSPEMG00000007639) #22	Agtrap (ENSPEMG00000008422) #23	Draxin (ENSPEMG00000008971)	Mad2l2 (ENSPEMG00000009876) #24	Fbxo6 (ENSPEMG00000010206) #25	Fbxo44 (ENSPEMG00000010664) #26	Fbxo2 (ENSPEMG00000011586) #27	Disp3 (ENSPEMG00000001917) #28	Ubiad1 (ENSPEMG00000027609) #29	Angptl7 (ENSPEMG00000016277) #30	Mtor (ENSPEMG00000013439) #31	Exosc10 (ENSPEMG00000007753) #32	Masp2 (ENSPEMG00000017820) #34	Tardbp (ENSPEMG00000015154) #36	ENSPEMG00000013358 #37	Casz1 (ENSPEMG00000012351)
Murinae	ANCESTRAL SPECIES	2	ENSGT00940000157630.a.a.a.a	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00940000161688.f.b.a.b	ENSGT00940000154712.c.a.b.b	ENSGT00940000154469.a.a.a.a.a.b	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Mus	ANCESTRAL SPECIES	3	ENSGT00940000157630.a.a.a.a	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00940000161688.f.b.a.b	ENSGT00940000154712.c.a.b.b	ENSGT00940000154469.a.a.a.a.a.b	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Mus_A	ANCESTRAL SPECIES	3	ENSGT00940000157630.a.a.a.a	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00940000161688.f.b.a.b	ENSGT00940000154712.c.a.b.b	ENSGT00940000154469.a.a.a.a.a.b	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Mus_B	ANCESTRAL SPECIES	5	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00940000154712.c.a.b.b.d.a.a.a.a	ENSGT00940000154712.c.a.b.b.d.a.a.a.b	ENSGT00940000154469.a.a.a.a.a.b	ENSGT00390000003768 #15	ENSGT00940000168197	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Mus_C	ANCESTRAL SPECIES	2	ENSGT00940000157630.a.a.a.b	ENSGT00940000157630.a.a.a.a	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00940000154469.a.a.a.a.a.b	ENSGT00390000003768 #15	ENSGT00940000168197	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000017402 #23	ENSGT00390000013828	ENSGT00940000153395.b #24	ENSGT00940000159980 #25	ENSGT00940000159408 #26	ENSGT00940000160929 #27	ENSGT00940000157931 #28	ENSGT00390000012439 #29	ENSGT00930000151037 #31	ENSGT00940000157064.a.a #30	ENSGT00390000015408 #32	ENSGT00870000136521 #33	ENSGT00950000183084.b.a.b #34	ENSGT00940000154343 #36	ENSGT00390000003592 #37
Steppe mouse	MODERN SPECIES	3147								Zfp933 (ENSMSIG00000010977)	Miip (ENSMSIG00000011005) #15	Mfn2 (ENSMSIG00000011070) #16	Plod1 (ENSMSIG00000011130) #17	2510039O18Rik (ENSMSIG00000011176) #18	Nppb (ENSMSIG00000011201) ##19	Nppa (ENSMSIG00000011213) #19	Clcn6 (ENSMSIG00000011225) #21	Mthfr (ENSMSIG00000011288) #22	Agtrap (ENSMSIG00000011355) #23	ENSMSIG00000011372	Draxin (ENSMSIG00000011398)	Mad2l2 (ENSMSIG00000011418) #24	ENSMSIG00000011464 #26	Fbxo2 (ENSMSIG00000011541) #27	Disp3 (ENSMSIG00000011555) #28	Ubiad1 (ENSMSIG00000011575) #29	Mtor (ENSMSIG00000011592) #31	Angptl7 (ENSMSIG00000011805) #30	Exosc10 (ENSMSIG00000011825) #32	Srm (ENSMSIG00000011893) #33	Masp2 (ENSMSIG00000011900) #34	Tardbp (ENSMSIG00000011917) #36	Gm572 (ENSMSIG00000012030) #37
spretus	MODERN SPECIES	13	AAdacl4fm3 (MGP_SPRETEiJ_G0027769)	Aadacl4fm5 (MGP_SPRETEiJ_G0027770)	Dhrs3 (MGP_SPRETEiJ_G0027771) #12	Vps13d (MGP_SPRETEiJ_G0027772) #13	Tnfrsf1b (MGP_SPRETEiJ_G0027773) #14	Tnfrsf8 (MGP_SPRETEiJ_G0027774)	Zfp933 (MGP_SPRETEiJ_G0027775)	Miip (MGP_SPRETEiJ_G0027776) #15	Fv1 (MGP_SPRETEiJ_G0027777)	Mfn2 (MGP_SPRETEiJ_G0027778) #16	Plod1 (MGP_SPRETEiJ_G0027779) #17	2510039O18Rik (MGP_SPRETEiJ_G0027780) #18	Nppb (MGP_SPRETEiJ_G0027781) ##19	Nppa (MGP_SPRETEiJ_G0027782) #19	Clcn6 (MGP_SPRETEiJ_G0027783) #21	Mthfr (MGP_SPRETEiJ_G0027784) #22	Agtrap (MGP_SPRETEiJ_G0027785) #23	Draxin (MGP_SPRETEiJ_G0027786)	Mad2l2 (MGP_SPRETEiJ_G0027787) #24	Fbxo6 (MGP_SPRETEiJ_G0027788) #25	Fbxo44 (MGP_SPRETEiJ_G0027789) #26	Fbxo2 (MGP_SPRETEiJ_G0027790) #27	Disp3 (MGP_SPRETEiJ_G0027791) #28	Ubiad1 (MGP_SPRETEiJ_G0027792) #29	Mtor (MGP_SPRETEiJ_G0027793) #31	Angptl7 (MGP_SPRETEiJ_G0027794) #30	Exosc10 (MGP_SPRETEiJ_G0027795) #32	Srm (MGP_SPRETEiJ_G0027796) #33	Masp2 (MGP_SPRETEiJ_G0027797) #34	Tardbp (MGP_SPRETEiJ_G0027798) #36	Gm572 (MGP_SPRETEiJ_G0027799) #37
Mouse	MODERN SPECIES	13	Zfp978 (ENSMUSG00000078497)	Zfp982 (ENSMUSG00000078496)	Zfp985 (ENSMUSG00000065999)	Zfp979 (ENSMUSG00000066000)	Zfp534 (ENSMUSG00000062518)	Zfp984 (ENSMUSG00000078495)	Zfp933 (ENSMUSG00000059423)	Miip (ENSMUSG00000029022) #15	Fv1 (ENSMUSG00000070583)	Mfn2 (ENSMUSG00000029020) #16	Plod1 (ENSMUSG00000019055) #17	2510039O18Rik (ENSMUSG00000044496) #18	Nppb (ENSMUSG00000029019) ##19	Nppa (ENSMUSG00000041616) #19	Clcn6 (ENSMUSG00000029016) #21	Mthfr (ENSMUSG00000029009) #22	Agtrap (ENSMUSG00000029007) #23	Draxin (ENSMUSG00000029005)	Mad2l2 (ENSMUSG00000029003) #24	Fbxo6 (ENSMUSG00000055401) #25	Fbxo44 (ENSMUSG00000029001) #26	Fbxo2 (ENSMUSG00000041556) #27	Disp3 (ENSMUSG00000041544) #28	Ubiad1 (ENSMUSG00000047719) #29	Mtor (ENSMUSG00000028991) #31	Angptl7 (ENSMUSG00000028989) #30	Exosc10 (ENSMUSG00000017264) #32	Srm (ENSMUSG00000006442) #33	Masp2 (ENSMUSG00000028979) #34	Tardbp (ENSMUSG00000041459) #36	Gm572 (ENSMUSG00000070577) #37
Ryukyu mouse	MODERN SPECIES	13	Aadacl4fm4 (MGP_CAROLIEiJ_G0026776)	AAdacl4fm3 (MGP_CAROLIEiJ_G0026777)	Aadacl4fm5 (MGP_CAROLIEiJ_G0026778)	Dhrs3 (MGP_CAROLIEiJ_G0026779) #12	Vps13d (MGP_CAROLIEiJ_G0026780) #13	Tnfrsf1b (MGP_CAROLIEiJ_G0026781) #14	Tnfrsf8 (MGP_CAROLIEiJ_G0026782)	MGP_CAROLIEiJ_G0026783	Miip (MGP_CAROLIEiJ_G0026784) #15	Mfn2 (MGP_CAROLIEiJ_G0026785) #16	Plod1 (MGP_CAROLIEiJ_G0026786) #17	2510039O18Rik (MGP_CAROLIEiJ_G0026787) #18	Nppb (MGP_CAROLIEiJ_G0026788) ##19	Nppa (MGP_CAROLIEiJ_G0026789) #19	Clcn6 (MGP_CAROLIEiJ_G0026790) #21	Mthfr (MGP_CAROLIEiJ_G0026791) #22	Agtrap (MGP_CAROLIEiJ_G0026792) #23	Draxin (MGP_CAROLIEiJ_G0026793)	MGP_CAROLIEiJ_G0026794 #24	Fbxo6 (MGP_CAROLIEiJ_G0026795) #25	Fbxo44 (MGP_CAROLIEiJ_G0026796) #26	Fbxo2 (MGP_CAROLIEiJ_G0026797) #27	Disp3 (MGP_CAROLIEiJ_G0026798) #28	Ubiad1 (MGP_CAROLIEiJ_G0026799) #29	Mtor (MGP_CAROLIEiJ_G0026800) #31	Angptl7 (MGP_CAROLIEiJ_G0026801) #30	Exosc10 (MGP_CAROLIEiJ_G0026802) #32	Srm (MGP_CAROLIEiJ_G0026803) #33	Masp2 (MGP_CAROLIEiJ_G0026804) #34	Tardbp (MGP_CAROLIEiJ_G0026805) #36	Gm572 (MGP_CAROLIEiJ_G0026806) #37
Shrew mouse	MODERN SPECIES	19	Aadacl4fm4 (MGP_PahariEiJ_G0029124)	AAdacl4fm3 (MGP_PahariEiJ_G0029125)	Aadacl4fm5 (MGP_PahariEiJ_G0029126)	Dhrs3 (MGP_PahariEiJ_G0029127) #12	Vps13d (MGP_PahariEiJ_G0029128) #13	Tnfrsf1b (MGP_PahariEiJ_G0029129) #14	Tnfrsf8 (MGP_PahariEiJ_G0029130)	MGP_PahariEiJ_G0029131	Miip (MGP_PahariEiJ_G0029132) #15	Mfn2 (MGP_PahariEiJ_G0029133) #16	Plod1 (MGP_PahariEiJ_G0029134) #17	2510039O18Rik (MGP_PahariEiJ_G0029135) #18	Nppb (MGP_PahariEiJ_G0029136) ##19	Nppa (MGP_PahariEiJ_G0029137) #19	Clcn6 (MGP_PahariEiJ_G0029138) #21	Mthfr (MGP_PahariEiJ_G0029139) #22	Agtrap (MGP_PahariEiJ_G0029140) #23	Draxin (MGP_PahariEiJ_G0029141)	Mad2l2 (MGP_PahariEiJ_G0029142) #24	Fbxo6 (MGP_PahariEiJ_G0029143) #25	MGP_PahariEiJ_G0029144 #26	Fbxo2 (MGP_PahariEiJ_G0029145) #27	Disp3 (MGP_PahariEiJ_G0029146) #28	Ubiad1 (MGP_PahariEiJ_G0029147) #29	Mtor (MGP_PahariEiJ_G0029148) #31	Angptl7 (MGP_PahariEiJ_G0029149) #30	Exosc10 (MGP_PahariEiJ_G0029150) #32	Srm (MGP_PahariEiJ_G0029151) #33	Masp2 (MGP_PahariEiJ_G0029152) #34	Tardbp (MGP_PahariEiJ_G0029153) #36	Gm572 (MGP_PahariEiJ_G0029154) #37
Rat	MODERN SPECIES	15	Rex2 (ENSRNOG00000062461)	ENSRNOG00000063649	ENSRNOG00000070045	ENSRNOG00000068633	RGD1565622 (ENSRNOG00000033792)	ENSRNOG00000068760	RGD1565622 (ENSRNOG00000062859)	Zfp933 (ENSRNOG00000056374)	Miip (ENSRNOG00000024139) #15	Mfn2 (ENSRNOG00000046424) #16	Plod1 (ENSRNOG00000007763) #17	Kiaa2013 (ENSRNOG00000007968) #18	Nppb (ENSRNOG00000008141) ##19	Nppa (ENSRNOG00000008176) #19	Clcn6 (ENSRNOG00000008345) #21	Mthfr (ENSRNOG00000008553) #22	Agtrap (ENSRNOG00000008619) #23	Draxin (ENSRNOG00000008911)	Rpl35a (ENSRNOG00000031641)	Mad2l2 (ENSRNOG00000009134) #24	Fbxo6 (ENSRNOG00000009217) #25	Fbxo44 (ENSRNOG00000009298) #26	Fbxo2 (ENSRNOG00000009409) #27	Disp3 (ENSRNOG00000026447) #28	Ubiad1 (ENSRNOG00000009575) #29	Mtor (ENSRNOG00000009615) #31	Angptl7 (ENSRNOG00000009589) #30	Exosc10 (ENSRNOG00000010719) #32	Srm (ENSRNOG00000011078) #33	Masp2 (ENSRNOG00000011258) #34	Tardbp (ENSRNOG00000012455) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1508		ENSNGAG00000023452	ENSNGAG00000011491	Dhrs3 (ENSNGAG00000014336) #12	Vps13d (ENSNGAG00000009848) #13	Tnfrsf1b (ENSNGAG00000020592) #14	Tnfrsf8 (ENSNGAG00000019763)	Miip (ENSNGAG00000016536) #15	Mfn2 (ENSNGAG00000014552) #16	ENSNGAG00000008701 #17	ENSNGAG00000000418 #17	2510039O18Rik (ENSNGAG00000009009) #18	ENSNGAG00000001304 ##19	Nppa (ENSNGAG00000000398) #19	Clcn6 (ENSNGAG00000009782) #21	Mthfr (ENSNGAG00000019269) #22	Agtrap (ENSNGAG00000010052) #23
Lesser Egyptian jerboa	MODERN SPECIES	63	Cfap107 (ENSJJAG00000012706)	Aadacl3 (ENSJJAG00000011110)	Aadacl4fm1 (ENSJJAG00000011655)	ENSJJAG00000009632	ENSJJAG00000010939	ENSJJAG00000011214	Dhrs3 (ENSJJAG00000010964) #12	Vps13d (ENSJJAG00000013581) #13	Tnfrsf1b (ENSJJAG00000010813) #14	Tnfrsf8 (ENSJJAG00000009574)	Miip (ENSJJAG00000013944) #15	Mfn2 (ENSJJAG00000012023) #16	Plod1 (ENSJJAG00000013988) #17	2510039O18Rik (ENSJJAG00000010333) #18	Clcn6 (ENSJJAG00000016002) #21	Mthfr (ENSJJAG00000012654) #22	Agtrap (ENSJJAG00000012982) #23	Draxin (ENSJJAG00000012353)	Mad2l2 (ENSJJAG00000011689) #24	Fbxo6 (ENSJJAG00000000468) #25	Fbxo44 (ENSJJAG00000009397) #26	Fbxo2 (ENSJJAG00000016652) #27	Disp3 (ENSJJAG00000015607) #28	Ubiad1 (ENSJJAG00000002293) #29	Mtor (ENSJJAG00000012490) #31	Angptl7 (ENSJJAG00000013404) #30	ENSJJAG00000014877	Exosc10 (ENSJJAG00000013716) #32	Srm (ENSJJAG00000012169) #33	Masp2 (ENSJJAG00000012373) #34	Tardbp (ENSJJAG00000014196) #36
Kangaroo rat	MODERN SPECIES	325	Oprd1 (ENSDORG00000015419)	ENSDORG00000028662	Srsf4 (ENSDORG00000002459)	Mecr (ENSDORG00000002462)	Ptpru (ENSDORG00000002463)	Matn1 (ENSDORG00000009341)	Sdc3 (ENSDORG00000013924)	Pum1 (ENSDORG00000001875)	Nkain1 (ENSDORG00000000481)	Lrrc38 (ENSDORG00000030076)	Dhrs3 (ENSDORG00000006514) #12	Vps13d (ENSDORG00000014944) #13	Plod1 (ENSDORG00000008737) #17	Nppa (ENSDORG00000014043) #19	Clcn6 (ENSDORG00000014040) #21	Mthfr (ENSDORG00000014032) #22	Agtrap (ENSDORG00000015318) #23	Mad2l2 (ENSDORG00000008092) #24	Fbxo44 (ENSDORG00000008095) #26	Fbxo2 (ENSDORG00000008096) #27	Disp3 (ENSDORG00000006252) #28	Ubiad1 (ENSDORG00000030027) #29	Angptl7 (ENSDORG00000003775) #30	Mtor (ENSDORG00000003771) #31	Exosc10 (ENSDORG00000003769) #32	Srm (ENSDORG00000003765) #33	Tardbp (ENSDORG00000007465) #36	ENSDORG00000004264	Pex14 (ENSDORG00000004262)	Dffa (ENSDORG00000026764)	Cenps (ENSDORG00000028751)
Lagomorpha	ANCESTRAL SPECIES	140	ENSGT01030000234531.A.b.b.b.c	ENSGT00390000014553	ENSGT00940000162160	ENSGT00940000157630	ENSGT00940000158724 #12	ENSGT00950000183083.b #13	ENSGT00940000161800 #14	ENSGT00510000049215	ENSGT00390000003768 #15	ENSGT00390000013727.c #16	ENSGT01030000234558.A.a.a.b #17	ENSGT00390000007643 #18	ENSGT00940000154513.A ##19	ENSGT00940000154513.B #19	ENSGT00940000159291 #21	ENSGT00390000012490 #22	ENSGT00390000000617	ENSGT00390000017402 #23	ENSGT00390000013828
Pika	DUPLICATION
Pika	MODERN SPECIES	3673														ENSOPRG00000015901 #19	CLCN6 (ENSOPRG00000015871) #21	ENSOPRG00000015851 #22	ENSOPRG00000015820	ENSOPRG00000019071
Pika	MODERN SPECIES	4952																ENSOPRG00000014391 #22	ENSOPRG00000018970 #23	ENSOPRG00000014383
Rabbit	MODERN SPECIES	472	ENSOCUG00000008348	CFAP107 (ENSOCUG00000007517)	AADACL3 (ENSOCUG00000025025)	ENSOCUG00000026490	ENSOCUG00000003422	ENSOCUG00000029199 #12	VPS13D (ENSOCUG00000005551) #13	TNFRSF1B (ENSOCUG00000014127) #14	TNFRSF8 (ENSOCUG00000015925)	ENSOCUG00000003525 #15	MFN2 (ENSOCUG00000007972) #16	PLOD1 (ENSOCUG00000007960) #17	ENSOCUG00000027131 ##19	NPPA (ENSOCUG00000007311) #19	CLCN6 (ENSOCUG00000007298) #21	MTHFR (ENSOCUG00000007291) #22	ENSOCUG00000007278	AGTRAP (ENSOCUG00000003803) #23	DRAXIN (ENSOCUG00000005549)