Vertebrata	ANCESTRAL SPECIES	1054															ENSGT00390000011759 #23	ENSGT00390000011137 #22
Gnathostomata	ANCESTRAL SPECIES	1688															ENSGT00390000011759 #23	ENSGT00390000011137 #22
Euteleostomi	ANCESTRAL SPECIES	242															ENSGT00390000011759 #23	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00950000182986.a.b.b #20	ENSGT00940000159198 #19	ENSGT00940000155285.b #17	ENSGT00390000015159.b #15	ENSGT00940000165526	ENSGT00940000158547 #14	ENSGT00940000158742 #13	ENSGT00390000002143.a	ENSGT00940000159042	ENSGT00530000064699	ENSGT00940000159760	ENSGT00940000158506	ENSGT00390000011144
Sarcopterygii	ANCESTRAL SPECIES	224															ENSGT00390000011759 #23	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00950000182986.a.b.b #20	ENSGT00940000159198 #19	ENSGT00940000155285.b #17	ENSGT00390000015159.b #15	ENSGT00940000165526	ENSGT00940000158547 #14	ENSGT00940000158742 #13	ENSGT00390000002143.a	ENSGT00940000159042	ENSGT00530000064699	ENSGT00940000159760	ENSGT00940000158506	ENSGT00390000011144	ENSGT00940000156215
Tetrapoda	ANCESTRAL SPECIES	1	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00940000165526	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00910000144630.a.f	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Amniota	ANCESTRAL SPECIES	3	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00940000165526	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Mammalia	ANCESTRAL SPECIES	3	ENSGT00940000177637	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Theria	ANCESTRAL SPECIES	7	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Eutheria	ANCESTRAL SPECIES	15	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Boreoeutheria	ANCESTRAL SPECIES	19	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.a.b ##17	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Euarchontoglires	ANCESTRAL SPECIES	19	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.a.b ##17	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Euarchontoglires_A	ANCESTRAL SPECIES	19	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.a.b ##17	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Glires	ANCESTRAL SPECIES	20	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.a.b ##17	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Rodentia	ANCESTRAL SPECIES	19	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.a.b ##17	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Rodentia_B	ANCESTRAL SPECIES	17	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.a.a #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Myomorpha	ANCESTRAL SPECIES	18	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.a.a #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Muroidea	ANCESTRAL SPECIES	14	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.a.a #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Upper Galilee mountains blind mole rat	MODERN SPECIES	1294							Adcy8 (ENSNGAG00000002045) #13	Asap1 (ENSNGAG00000021518) #14	Cyrib (ENSNGAG00000023089) #15	ENSNGAG00000021762 #16	Myc (ENSNGAG00000021358) #17	ENSNGAG00000020200 #18	Lratd2 (ENSNGAG00000019272) #19	Trib1 (ENSNGAG00000018466) #20	ENSNGAG00000016935 #21	Washc5 (ENSNGAG00000014059) #22	Sqle (ENSNGAG00000004521) #23	ENSNGAG00000011211 #24	Mtss1 (ENSNGAG00000023068) #25	Ndufb9 (ENSNGAG00000021409) #26	ENSNGAG00000018459 #27	Rnf139 (ENSNGAG00000013175) #28	Trmt12 (ENSNGAG00000014548) #29	Tmem65 (ENSNGAG00000011951) #30	Fer1l6 (ENSNGAG00000012037) #31
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.a.a #17	ENSGT01100000263562.b.a.a.c.a.g	ENSGT00940000159198 #19	ENSGT01100000263562.b.a.a.c.a.h	ENSGT00390000003114.e.b.b.q.a	ENSGT00390000015252.c.b	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00940000165417	ENSGT00900000143171
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.a.a #17	ENSGT01100000263562.b.a.a.c.a.g	ENSGT00940000159198 #19	ENSGT01100000263562.b.a.a.c.a.h	ENSGT00390000003114.e.b.b.q.a	ENSGT00390000015252.c.b	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00940000165417	ENSGT00900000143171
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.a.a #17	ENSGT01100000263562.b.a.a.c.a.g	ENSGT00940000159198 #19	ENSGT01100000263562.b.a.a.c.a.h	ENSGT00390000003114.e.b.b.q.a	ENSGT00390000015252.c.b	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00940000165417	ENSGT00900000143171
Northern American deer mouse	MODERN SPECIES	12					ENSPEMG00000010097 #16	Myc (ENSPEMG00000018619) #17	ENSPEMG00000012597	A1bg (ENSPEMG00000019572)	ENSPEMG00000019306	Lratd2 (ENSPEMG00000019492) #19	ENSPEMG00000030011	ENSPEMG00000029431	4933412E24Rik (ENSPEMG00000026431)	Trib1 (ENSPEMG00000027673) #20	Nsmce2 (ENSPEMG00000021890) #21	Washc5 (ENSPEMG00000021906) #22	Sqle (ENSPEMG00000023154) #23	ENSPEMG00000026862	ENSPEMG00000001913	Mtss1 (ENSPEMG00000021734) #25	Ndufb9 (ENSPEMG00000024126) #26	Tatdn1 (ENSPEMG00000012112) #27	Rnf139 (ENSPEMG00000010660) #28	Trmt12 (ENSPEMG00000021958) #29	Tmem65 (ENSPEMG00000022469) #30	Fer1l6 (ENSPEMG00000022117) #31	Fam91a1 (ENSPEMG00000012197)	Anxa13 (ENSPEMG00000021954)	Klhl38 (ENSPEMG00000022160)	Fbxo32 (ENSPEMG00000028760)	ENSPEMG00000021840
Prairie vole	MODERN SPECIES	2	Kcnq3 (ENSMOCG00000017138)	Hhla1 (ENSMOCG00000012232)	Oc90 (ENSMOCG00000003122)	Efr3a (ENSMOCG00000005515)	ENSMOCG00000002825	Adcy8 (ENSMOCG00000012981) #13	Asap1 (ENSMOCG00000002939) #14	Cyrib (ENSMOCG00000002789) #15	ENSMOCG00000009341 #16	ENSMOCG00000001001 #16	Myc (ENSMOCG00000018286) #17	A1bg (ENSMOCG00000014955)	Lratd2 (ENSMOCG00000000246) #19	Trib1 (ENSMOCG00000007861) #20	Nsmce2 (ENSMOCG00000015988) #21	Washc5 (ENSMOCG00000009448) #22	Sqle (ENSMOCG00000022832) #23	Mtss1 (ENSMOCG00000011955) #25	Ndufb9 (ENSMOCG00000021982) #26	Tatdn1 (ENSMOCG00000001584) #27	Rnf139 (ENSMOCG00000013793) #28	Tmem65 (ENSMOCG00000002180) #30	Fer1l6 (ENSMOCG00000020287) #31	Fam91a1 (ENSMOCG00000017662)	Anxa13 (ENSMOCG00000022952)	Klhl38 (ENSMOCG00000003679)	Fbxo32 (ENSMOCG00000020393)	Wdyhv1 (ENSMOCG00000017917)	Atad2 (ENSMOCG00000020981)	9130401M01Rik (ENSMOCG00000018536)	Fam83a (ENSMOCG00000017206)
Cricetinae	ANCESTRAL SPECIES	38														ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00940000170914	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00940000165417	ENSGT00900000143171
Chinese hamster chok1gshd	MODERN SPECIES	193																Washc5 (ENSCGRG00001009954) #22	Sqle (ENSCGRG00001011940) #23
Golden Hamster	MODERN SPECIES	752														Trib1 (ENSMAUG00000009811) #20	Nsmce2 (ENSMAUG00000017251) #21	Washc5 (ENSMAUG00000017830) #22	Sqle (ENSMAUG00000004073) #23	Mtss1 (ENSMAUG00000021620) #25	Ndufb9 (ENSMAUG00000013523) #26	Tatdn1 (ENSMAUG00000013670) #27	Rnf139 (ENSMAUG00000017621) #28	Tmem65 (ENSMAUG00000011700) #30	Fer1l6 (ENSMAUG00000016963) #31	ENSMAUG00000000579	Anxa13 (ENSMAUG00000012076)	Klhl38 (ENSMAUG00000019546)	Fbxo32 (ENSMAUG00000007704)	Wdyhv1 (ENSMAUG00000000453)	Atad2 (ENSMAUG00000021506)	ENSMAUG00000018830	Zhx1 (ENSMAUG00000021328)
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.a.a #17	ENSGT01100000263562.b.a.a.c.a.g	ENSGT00940000159198 #19	ENSGT01100000263562.b.a.a.c.a.h	ENSGT00390000003114.e.b.b.q.a	ENSGT00390000015252.c.b	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00940000165417	ENSGT00900000143171
Mus	ANCESTRAL SPECIES	11	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.a.a #17	ENSGT01100000263562.b.a.a.c.a.g	ENSGT00940000159198 #19	ENSGT00390000015252.c.b	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00940000165417	ENSGT00950000182893.a.a.a.a
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b.g #16	ENSGT00940000155285.b.a.a #17	ENSGT01100000263562.b.a.a.c.a.g	ENSGT00940000159198 #19	ENSGT00390000015252.c.b	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00940000160915.q	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00940000165417
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b.h #16	ENSGT00950000183140.a.a.m.a.a.b.g #16	ENSGT00940000155285.b.a.a #17	ENSGT01100000263562.b.a.a.c.a.g	ENSGT00940000159198 #19	ENSGT00390000015252.c.b	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00940000160915.q	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00940000165417
Mouse	MODERN SPECIES	6	Oc90 (ENSMUSG00000015001)	Efr3a (ENSMUSG00000015002)	Adcy8 (ENSMUSG00000022376) #13	Asap1 (ENSMUSG00000022377) #14	Cyrib (ENSMUSG00000022378) #15	Gsdmc4 (ENSMUSG00000055748) #16	Gsdmc3 (ENSMUSG00000055827) #16	Gsdmc2 (ENSMUSG00000056293) #16	Gsdmc (ENSMUSG00000079025) #16	Myc (ENSMUSG00000022346) #17	A1bg (ENSMUSG00000022347)	Lratd2 (ENSMUSG00000072568) #19	4933412E24Rik (ENSMUSG00000071749)	Trib1 (ENSMUSG00000032501) #20	Nsmce2 (ENSMUSG00000059586) #21	Washc5 (ENSMUSG00000022350) #22	Sqle (ENSMUSG00000022351) #23	Mtss1 (ENSMUSG00000022353) #25	Ndufb9 (ENSMUSG00000022354) #26	Tatdn1 (ENSMUSG00000050891) #27	Rnf139 (ENSMUSG00000037075) #28	Trmt12 (ENSMUSG00000037085) #29	Tmem65 (ENSMUSG00000062373) #30	Fer1l6 (ENSMUSG00000037106) #31	Fam91a1 (ENSMUSG00000037119)	Anxa13 (ENSMUSG00000055114)	Klhl38 (ENSMUSG00000022357)	Fbxo32 (ENSMUSG00000022358)	Wdyhv1 (ENSMUSG00000022359)	Atad2 (ENSMUSG00000022360)	Zhx1 (ENSMUSG00000022361)
Mus_C	ANCESTRAL SPECIES	28	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b.h #16	ENSGT00950000183140.a.a.m.a.a.b.g #16	ENSGT00940000155285.b.a.a #17	ENSGT01100000263562.b.a.a.c.a.g	ENSGT00940000159198 #19	ENSGT00390000015252.c.b	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00940000160915.q	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00940000165417
spretus	MODERN SPECIES	6	MGP_SPRETEiJ_G0020739	Adcy8 (MGP_SPRETEiJ_G0020738) #13	Asap1 (MGP_SPRETEiJ_G0020737) #14	Cyrib (MGP_SPRETEiJ_G0020736) #15	MGP_SPRETEiJ_G0020735 #16	MGP_SPRETEiJ_G0020734 #16	MGP_SPRETEiJ_G0020733 #16	MGP_SPRETEiJ_G0020732 #16	Myc (MGP_SPRETEiJ_G0020731) #17	A1bg (MGP_SPRETEiJ_G0020730)	MGP_SPRETEiJ_G0020728	4933412E24Rik (MGP_SPRETEiJ_G0020727)	MGP_SPRETEiJ_G0020726	Trib1 (MGP_SPRETEiJ_G0020725) #20	Nsmce2 (MGP_SPRETEiJ_G0020724) #21	Washc5 (MGP_SPRETEiJ_G0020723) #22	Sqle (MGP_SPRETEiJ_G0020722) #23	Mtss1 (MGP_SPRETEiJ_G0020721) #25	Ndufb9 (MGP_SPRETEiJ_G0020720) #26	Tatdn1 (MGP_SPRETEiJ_G0020719) #27	Rnf139 (MGP_SPRETEiJ_G0020718) #28	Trmt12 (MGP_SPRETEiJ_G0020717) #29	MGP_SPRETEiJ_G0020716	Tmem65 (MGP_SPRETEiJ_G0020715) #30	Fer1l6 (MGP_SPRETEiJ_G0020714) #31	Fam91a1 (MGP_SPRETEiJ_G0020713)	Anxa13 (MGP_SPRETEiJ_G0020712)	Klhl38 (MGP_SPRETEiJ_G0020711)	Fbxo32 (MGP_SPRETEiJ_G0020710)	Wdyhv1 (MGP_SPRETEiJ_G0020709)	Atad2 (MGP_SPRETEiJ_G0020708)
Steppe mouse	MODERN SPECIES	3414										A1bg (ENSMSIG00000014680)	Lratd2 (ENSMSIG00000014714) #19	4933412E24Rik (ENSMSIG00000014756)	ENSMSIG00000014761	Trib1 (ENSMSIG00000014778) #20	Nsmce2 (ENSMSIG00000014795) #21	Washc5 (ENSMSIG00000014868) #22	Sqle (ENSMSIG00000015013) #23	ENSMSIG00000015091	Mtss1 (ENSMSIG00000015108) #25	Ndufb9 (ENSMSIG00000015254) #26	Tatdn1 (ENSMSIG00000015274) #27	Rnf139 (ENSMSIG00000015345) #28	Trmt12 (ENSMSIG00000015348) #29	ENSMSIG00000015356	Tmem65 (ENSMSIG00000015374) #30	Fer1l6 (ENSMSIG00000015431) #31	Fam91a1 (ENSMSIG00000015533)	Anxa13 (ENSMSIG00000015648)	Klhl38 (ENSMSIG00000015670)	Fbxo32 (ENSMSIG00000015698)	ENSMSIG00000015723
Ryukyu mouse	MODERN SPECIES	6	Adcy8 (MGP_CAROLIEiJ_G0019841) #13	Asap1 (MGP_CAROLIEiJ_G0019840) #14	Cyrib (MGP_CAROLIEiJ_G0019839) #15	MGP_CAROLIEiJ_G0019838 #16	MGP_CAROLIEiJ_G0019837 #16	MGP_CAROLIEiJ_G0019836 #16	MGP_CAROLIEiJ_G0019835 #16	MGP_CAROLIEiJ_G0019834	Myc (MGP_CAROLIEiJ_G0019833) #17	A1bg (MGP_CAROLIEiJ_G0019832)	Lratd2 (MGP_CAROLIEiJ_G0019831) #19	MGP_CAROLIEiJ_G0019830	4933412E24Rik (MGP_CAROLIEiJ_G0019829)	Trib1 (MGP_CAROLIEiJ_G0019828) #20	Nsmce2 (MGP_CAROLIEiJ_G0019827) #21	Washc5 (MGP_CAROLIEiJ_G0019826) #22	Sqle (MGP_CAROLIEiJ_G0019825) #23	Mtss1 (MGP_CAROLIEiJ_G0019824) #25	Ndufb9 (MGP_CAROLIEiJ_G0019823) #26	Tatdn1 (MGP_CAROLIEiJ_G0019822) #27	Rnf139 (MGP_CAROLIEiJ_G0019821) #28	Trmt12 (MGP_CAROLIEiJ_G0019820) #29	MGP_CAROLIEiJ_G0019819	Tmem65 (MGP_CAROLIEiJ_G0019818) #30	Fer1l6 (MGP_CAROLIEiJ_G0019817) #31	Fam91a1 (MGP_CAROLIEiJ_G0019816)	Anxa13 (MGP_CAROLIEiJ_G0019815)	Klhl38 (MGP_CAROLIEiJ_G0019814)	Fbxo32 (MGP_CAROLIEiJ_G0019813)	MGP_CAROLIEiJ_G0019812	Atad2 (MGP_CAROLIEiJ_G0019811)
Shrew mouse	MODERN SPECIES	8	Kcnq3 (MGP_PahariEiJ_G0019850)	Hhla1 (MGP_PahariEiJ_G0019849)	Oc90 (MGP_PahariEiJ_G0019848)	Efr3a (MGP_PahariEiJ_G0019847)	Adcy8 (MGP_PahariEiJ_G0019846) #13	Asap1 (MGP_PahariEiJ_G0019845) #14	Cyrib (MGP_PahariEiJ_G0019844) #15	MGP_PahariEiJ_G0019843 #16	Myc (MGP_PahariEiJ_G0019842) #17	MGP_PahariEiJ_G0019841	Lratd2 (MGP_PahariEiJ_G0019840) #19	MGP_PahariEiJ_G0019839	4933412E24Rik (MGP_PahariEiJ_G0019838)	Trib1 (MGP_PahariEiJ_G0019837) #20	Nsmce2 (MGP_PahariEiJ_G0019836) #21	Washc5 (MGP_PahariEiJ_G0019835) #22	Sqle (MGP_PahariEiJ_G0019834) #23	Mtss1 (MGP_PahariEiJ_G0019833) #25	Ndufb9 (MGP_PahariEiJ_G0019832) #26	Tatdn1 (MGP_PahariEiJ_G0019831) #27	Rnf139 (MGP_PahariEiJ_G0019830) #28	Trmt12 (MGP_PahariEiJ_G0019829) #29	Tmem65 (MGP_PahariEiJ_G0019828) #30	Fer1l6 (MGP_PahariEiJ_G0019827) #31	Fam91a1 (MGP_PahariEiJ_G0019826)	MGP_PahariEiJ_G0019825	Klhl38 (MGP_PahariEiJ_G0019824)	Fbxo32 (MGP_PahariEiJ_G0019823)	Wdyhv1 (MGP_PahariEiJ_G0019822)	Atad2 (MGP_PahariEiJ_G0019821)	Zhx1 (MGP_PahariEiJ_G0019820)
Rat	MODERN SPECIES	17	Asap1 (ENSRNOG00000058733) #14	Cyrib (ENSRNOG00000061246) #15	RGD1359449 (ENSRNOG00000059240) ##16	Gsdmc (ENSRNOG00000054576) #16	Myc (ENSRNOG00000004500) #17	LOC120093860 (ENSRNOG00000062947)	A1bg (ENSRNOG00000004692)	LOC362921 (ENSRNOG00000033584)	Lratd2 (ENSRNOG00000004744) #19	LOC500877 (ENSRNOG00000029292)	AABR07058124.2 (ENSRNOG00000037549)	RGD1563100 (ENSRNOG00000004906)	LOC500876 (ENSRNOG00000004914)	Trib1 (ENSRNOG00000004100) #20	Nsmce2 (ENSRNOG00000003964) #21	Washc5 (ENSRNOG00000009739) #22	Sqle (ENSRNOG00000009550) #23	ENSRNOG00000062650	Mtss1 (ENSRNOG00000009001) #25	Tatdn1 (ENSRNOG00000047198) #27	Ndufb9 (ENSRNOG00000008987) #28	Trmt12 (ENSRNOG00000008978) #29	Tmem65 (ENSRNOG00000008934) #30	Fer1l6 (ENSRNOG00000025300) #31	Fam91a1 (ENSRNOG00000008271)	Anxa13 (ENSRNOG00000007980)	Klhl38 (ENSRNOG00000007896)	Fbxo32 (ENSRNOG00000006738)	Ntaq1 (ENSRNOG00000006700)	Atad2 (ENSRNOG00000025604)	ENSRNOG00000065001
Lesser Egyptian jerboa	MODERN SPECIES	83	Arc (ENSJJAG00000014241)	Jrk (ENSJJAG00000014218)	Psca (ENSJJAG00000004421)	Them6 (ENSJJAG00000019110)	Slurp1 (ENSJJAG00000019179)	Lypd2 (ENSJJAG00000019756)	Slurp2 (ENSJJAG00000002844)	Lynx1 (ENSJJAG00000010540)	Ly6d (ENSJJAG00000012360)	Ly6g6g (ENSJJAG00000012443)	ENSJJAG00000012836	ENSJJAG00000015183	ENSJJAG00000014595 #20	ENSJJAG00000014585 #20	Nsmce2 (ENSJJAG00000016644) #21	Washc5 (ENSJJAG00000020136) #22	Sqle (ENSJJAG00000018945) #23	Mtss1 (ENSJJAG00000023586) #25	Ndufb9 (ENSJJAG00000024271) #26	Tatdn1 (ENSJJAG00000000232) #27	Rnf139 (ENSJJAG00000012712) #28	Tmem65 (ENSJJAG00000019408) #30	Fer1l6 (ENSJJAG00000024097) #31	Fam91a1 (ENSJJAG00000017783)	Anxa13 (ENSJJAG00000022141)	Klhl38 (ENSJJAG00000000525)	ENSJJAG00000004541	Fbxo32 (ENSJJAG00000012240)	ENSJJAG00000013752	ENSJJAG00000018072	ENSJJAG00000019614
Kangaroo rat	MODERN SPECIES	401	Tmem71 (ENSDORG00000007609)	Dnaaf11 (ENSDORG00000007605)	Kcnq3 (ENSDORG00000004042)	ENSDORG00000027098	Oc90 (ENSDORG00000013727)	Efr3a (ENSDORG00000013722)	Adcy8 (ENSDORG00000006484) #13	Asap1 (ENSDORG00000012007) #14	Cyrib (ENSDORG00000005160) #15	ENSDORG00000010277 ##17	ENSDORG00000023556	ENSDORG00000029610	Lratd2 (ENSDORG00000016473) #19	ENSDORG00000027319 #20	Nsmce2 (ENSDORG00000009203) #21	Washc5 (ENSDORG00000009194) #22	Sqle (ENSDORG00000009191) #23
Rodentia_A	ANCESTRAL SPECIES	18	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.a.a #17	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Sciuridae	ANCESTRAL SPECIES	17	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Marmotini	ANCESTRAL SPECIES	10	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Alpin marmot	MODERN SPECIES	18	PHF20L1 (ENSMMMG00000003892)	TMEM71 (ENSMMMG00000003878)	DNAAF11 (ENSMMMG00000003839)	KCNQ3 (ENSMMMG00000003818)	HHLA1 (ENSMMMG00000003755)	OC90 (ENSMMMG00000003713)	EFR3A (ENSMMMG00000003617)	ENSMMMG00000003580	ADCY8 (ENSMMMG00000003467) #13	ASAP1 (ENSMMMG00000002349) #14	CYRIB (ENSMMMG00000002280) #15	MYC (ENSMMMG00000002155) ##17	LRATD2 (ENSMMMG00000002132) #19	TRIB1 (ENSMMMG00000002104) #20	NSMCE2 (ENSMMMG00000002063) #21	WASHC5 (ENSMMMG00000001964) #22	SQLE (ENSMMMG00000001908) #23	ZNF572 (ENSMMMG00000001899) #24	ENSMMMG00000001896	MTSS1 (ENSMMMG00000001832) #25	NDUFB9 (ENSMMMG00000001820) #26	TATDN1 (ENSMMMG00000001775) #27	RNF139 (ENSMMMG00000001759) #28	ENSMMMG00000001740	FER1L6 (ENSMMMG00000001651) #31	FAM91A1 (ENSMMMG00000001596)	ANXA13 (ENSMMMG00000001539)	KLHL38 (ENSMMMG00000001525)	FBXO32 (ENSMMMG00000001498)	NTAQ1 (ENSMMMG00000001457)	ATAD2 (ENSMMMG00000001397)
Marmotini_b	ANCESTRAL SPECIES	6	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Squirrel	MODERN SPECIES	70	PHF20L1 (ENSSTOG00000012416)	TMEM71 (ENSSTOG00000022474)	DNAAF11 (ENSSTOG00000011647)	KCNQ3 (ENSSTOG00000011130)	HHLA1 (ENSSTOG00000011122)	OC90 (ENSSTOG00000011108)	EFR3A (ENSSTOG00000002906)	ADCY8 (ENSSTOG00000002439) #13	ASAP1 (ENSSTOG00000013952) #14	CYRIB (ENSSTOG00000013940) #15	GSDMC (ENSSTOG00000007048) #16	MYC (ENSSTOG00000004944) ##17	LRATD2 (ENSSTOG00000025274) #19	TRIB1 (ENSSTOG00000023120) #20	NSMCE2 (ENSSTOG00000025816) #21	WASHC5 (ENSSTOG00000008463) #22	SQLE (ENSSTOG00000008446) #23	ZNF572 (ENSSTOG00000013236) #24	MTSS1 (ENSSTOG00000004442) #25	NDUFB9 (ENSSTOG00000021955) #26	TATDN1 (ENSSTOG00000010833) #27	RNF139 (ENSSTOG00000029108) #28	TRMT12 (ENSSTOG00000030617) #29	TMEM65 (ENSSTOG00000001422) #30	FER1L6 (ENSSTOG00000020953) #31	FAM91A1 (ENSSTOG00000001827)	ANXA13 (ENSSTOG00000001811)	KLHL38 (ENSSTOG00000025802)	FBXO32 (ENSSTOG00000001801)	NTAQ1 (ENSSTOG00000014890)	ATAD2 (ENSSTOG00000014877)
Arctic ground squirrel	MODERN SPECIES	12	HHLA1 (ENSUPAG00010006905)	OC90 (ENSUPAG00010006953)	EFR3A (ENSUPAG00010007015)	ADCY8 (ENSUPAG00010007199) #13	ENSUPAG00010007296	ENSUPAG00010007308	ASAP1 (ENSUPAG00010007317) #14	ENSUPAG00010008499	CYRIB (ENSUPAG00010008508) #15	ENSUPAG00010008543	GSDMC (ENSUPAG00010008550) #16	MYC (ENSUPAG00010008617) ##17	LRATD2 (ENSUPAG00010008630) #19	TRIB1 (ENSUPAG00010008649) #20	NSMCE2 (ENSUPAG00010008658) #21	WASHC5 (ENSUPAG00010008692) #22	SQLE (ENSUPAG00010008785) #23	ENSUPAG00010008820	MTSS1 (ENSUPAG00010008839) #25	NDUFB9 (ENSUPAG00010008893) #26	TATDN1 (ENSUPAG00010008902) #27	RNF139 (ENSUPAG00010008932) #28	TRMT12 (ENSUPAG00010008944) #29	TMEM65 (ENSUPAG00010008948) #30	FER1L6 (ENSUPAG00010008962) #31	FAM91A1 (ENSUPAG00010009049)	ANXA13 (ENSUPAG00010009130)	KLHL38 (ENSUPAG00010009154)	FBXO32 (ENSUPAG00010009164)	NTAQ1 (ENSUPAG00010009195)	ENSUPAG00010009232
Eurasian red squirrel	MODERN SPECIES		KCNQ3 (ENSSVLG00005015209)	HHLA1 (ENSSVLG00005015025)	OC90 (ENSSVLG00005014895)	EFR3A (ENSSVLG00005014594)	ADCY8 (ENSSVLG00005014238) #13	ENSSVLG00005014144	ASAP1 (ENSSVLG00005013846) #14	CYRIB (ENSSVLG00005013445) #15	GSDMC (ENSSVLG00005013325) #16	MYC (ENSSVLG00005013254) ##17	ENSSVLG00005013168	ENSSVLG00005013107	LRATD2 (ENSSVLG00005013066) #19	TRIB1 (ENSSVLG00005013017) #20	NSMCE2 (ENSSVLG00005012930) #21	WASHC5 (ENSSVLG00005012826) #22	SQLE (ENSSVLG00005012626) #23	ZNF572 (ENSSVLG00005012561) #24	MTSS1 (ENSSVLG00005012405) #25	NDUFB9 (ENSSVLG00005012274) #26	TATDN1 (ENSSVLG00005012019) #27	RNF139 (ENSSVLG00005011961) #28	TRMT12 (ENSSVLG00005011916) #29	TMEM65 (ENSSVLG00005011817) #30	FER1L6 (ENSSVLG00005011345) #31	ENSSVLG00005011244	ENSSVLG00005011201	ENSSVLG00005010787	ANXA13 (ENSSVLG00005010551)	KLHL38 (ENSSVLG00005004450)	FBXO32 (ENSSVLG00005004413)
Hystricomorpha	ANCESTRAL SPECIES	12	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.a.a #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Hystricomorpha_a	ANCESTRAL SPECIES	9	ENSGT00940000159300	ENSGT00940000156215.f	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.a.a #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Guinea pig	MODERN SPECIES	51	ENSCPOG00000036047	KCNQ3 (ENSCPOG00000009034)	OC90 (ENSCPOG00000009023)	EFR3A (ENSCPOG00000009010)	ENSCPOG00000036719	ADCY8 (ENSCPOG00000007195) #13	ENSCPOG00000025735	ASAP1 (ENSCPOG00000011466) #14	ENSCPOG00000024811	CYRIB (ENSCPOG00000001282) #15	ENSCPOG00000037441	MYC (ENSCPOG00000035605) #17	LRATD2 (ENSCPOG00000037883) #19	TRIB1 (ENSCPOG00000036990) #20	NSMCE2 (ENSCPOG00000001047) #21	WASHC5 (ENSCPOG00000007370) #22	SQLE (ENSCPOG00000007368) #23	ZNF572 (ENSCPOG00000031932) #24	MTSS1 (ENSCPOG00000015144) #25	NDUFB9 (ENSCPOG00000007325) #26	TATDN1 (ENSCPOG00000039026) #27	RNF139 (ENSCPOG00000002166) #28	TRMT12 (ENSCPOG00000026520) #29	TMEM65 (ENSCPOG00000030934) #30	FER1L6 (ENSCPOG00000000060) #31	FAM91A1 (ENSCPOG00000009997)	ANXA13 (ENSCPOG00000009981)	KLHL38 (ENSCPOG00000037134)	FBXO32 (ENSCPOG00000009972)	NTAQ1 (ENSCPOG00000004738)	ENSCPOG00000007885
Hystricomorpha_b	ANCESTRAL SPECIES	27	ENSGT00940000156215.f	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00950000182825.B	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.a.a #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Degu	MODERN SPECIES	103					ENSODEG00000003871	ADCY8 (ENSODEG00000003952) #13	ASAP1 (ENSODEG00000003587) #14	ENSODEG00000005289 #15	ENSODEG00000005362 #17	LRATD2 (ENSODEG00000019440) #19	ENSODEG00000005388	ENSODEG00000005425	ENSODEG00000005440 #20	ENSODEG00000005467 #20	NSMCE2 (ENSODEG00000005494) #21	WASHC5 (ENSODEG00000005903) #22	SQLE (ENSODEG00000005923) #23	ENSODEG00000005940	MTSS1 (ENSODEG00000005974) #25	NDUFB9 (ENSODEG00000005991) #26	ENSODEG00000003322 #27	RNF139 (ENSODEG00000003522) #28	TRMT12 (ENSODEG00000018933) #29	TMEM65 (ENSODEG00000003543) #30	ENSODEG00000003558	FER1L6 (ENSODEG00000003626) #31	FAM91A1 (ENSODEG00000003936)	ANXA13 (ENSODEG00000004011)	KLHL38 (ENSODEG00000002853)	FBXO32 (ENSODEG00000002945)	NTAQ1 (ENSODEG00000002956)
Long-tailed chinchilla	MODERN SPECIES	168	PHF20L1 (ENSCLAG00000001398)	ENSCLAG00000001275	KCNQ3 (ENSCLAG00000001179)	HHLA1 (ENSCLAG00000001503)	OC90 (ENSCLAG00000001332)	EFR3A (ENSCLAG00000004861)	TUBA3C (ENSCLAG00000003540)	ADCY8 (ENSCLAG00000003142) #13	ASAP1 (ENSCLAG00000001402) #14	CYRIB (ENSCLAG00000001194) #15	ENSCLAG00000001086 #16	MYC (ENSCLAG00000000909) #17	LRATD2 (ENSCLAG00000017512) #19	TRIB1 (ENSCLAG00000002016) #20	NSMCE2 (ENSCLAG00000001899) #21	WASHC5 (ENSCLAG00000001741) #22	SQLE (ENSCLAG00000001576) #23	ZNF572 (ENSCLAG00000002623) #24
Naked mole-rat female	MODERN SPECIES	1	ENSHGLG00000016070	ENSHGLG00000019086	ENSHGLG00000034097	ENSHGLG00000033561	ENSHGLG00000035028	ENSHGLG00000006351 #13	ASAP1 (ENSHGLG00000010778) #14	FAM49B (ENSHGLG00000050014) #15	GSDMC (ENSHGLG00000044963) #16	MYC (ENSHGLG00000006922) #17	LRATD2 (ENSHGLG00000016236) #19	ENSHGLG00000003612	ENSHGLG00000016266	TRIB1 (ENSHGLG00000038354) #20	NSMCE2 (ENSHGLG00000019000) #21	WASHC5 (ENSHGLG00000013191) #22	SQLE (ENSHGLG00000008484) #23	ZNF572 (ENSHGLG00000011462) #24	MTSS1 (ENSHGLG00000012623) #25	NDUFB9 (ENSHGLG00000014922) #26	ENSHGLG00000018372 #27	RNF139 (ENSHGLG00000005311) #28	ENSHGLG00000006171	TRMT12 (ENSHGLG00000047505) #29	ENSHGLG00000014989 #30	FER1L6 (ENSHGLG00000005537) #31	ENSHGLG00000007964	ANXA13 (ENSHGLG00000011810)	KLHL38 (ENSHGLG00000007208)	FBXO32 (ENSHGLG00000035053)	WDYHV1 (ENSHGLG00000009608)
Lagomorpha	ANCESTRAL SPECIES	46	ENSGT00940000177637	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00940000155285.b.a.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Rabbit	MODERN SPECIES	14	ENSOCUG00000030310	ADCY8 (ENSOCUG00000002685) #13	ASAP1 (ENSOCUG00000002414) #14	ENSOCUG00000013690 #15	ENSOCUG00000021577 ##16	ENSOCUG00000024677	ENSOCUG00000038124	ENSOCUG00000025215	ENSOCUG00000000506	MYC (ENSOCUG00000014289) ##17	LRATD2 (ENSOCUG00000003500) #19	ENSOCUG00000037909	TRIB1 (ENSOCUG00000024295) #20	ENSOCUG00000030414	NSMCE2 (ENSOCUG00000008539) #21	WASHC5 (ENSOCUG00000015785) #22	SQLE (ENSOCUG00000015771) #23	ZNF572 (ENSOCUG00000039324) #24	ENSOCUG00000030136	MTSS1 (ENSOCUG00000008102) #25	NDUFB9 (ENSOCUG00000025074) #26	TATDN1 (ENSOCUG00000017403) #27	RNF139 (ENSOCUG00000017399) #28	TRMT12 (ENSOCUG00000026379) #29	ENSOCUG00000029848	FER1L6 (ENSOCUG00000026113) #31	ENSOCUG00000038185	ENSOCUG00000037623	FAM91A1 (ENSOCUG00000011804)	ANXA13 (ENSOCUG00000011787)	KLHL38 (ENSOCUG00000011785)
Pika	MODERN SPECIES	3841															ENSOPRG00000005028 #21	WASHC5 (ENSOPRG00000004978) #22	SQLE (ENSOPRG00000004956) #23	ENSOPRG00000004949 #24
Tree shrew	MODERN SPECIES	4313														TRIB1 (ENSTBEG00000005685) #20	NSMCE2 (ENSTBEG00000005371) #21	WASHC5 (ENSTBEG00000003931) #22	SQLE (ENSTBEG00000003064) #23	ZNF572 (ENSTBEG00000002733) #24
Primates	ANCESTRAL SPECIES	20	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147863	ENSGT00910000147614	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Strepsirrhini	ANCESTRAL SPECIES	15	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.b ##17	ENSGT00910000147863	ENSGT00910000147614	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Lemuriformes	ANCESTRAL SPECIES	36	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.b ##17	ENSGT00910000147863	ENSGT00910000147614	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Lemuriformes_a	ANCESTRAL SPECIES	154								ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.b ##17	ENSGT00910000147863	ENSGT00910000147614	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Greater bamboo lemur	MODERN SPECIES	115										ENSPSMG00000021257	LRATD2 (ENSPSMG00000021262) #19	ENSPSMG00000021277	TRIB1 (ENSPSMG00000021281) #20	NSMCE2 (ENSPSMG00000021304) #21	ENSPSMG00000021310	WASHC5 (ENSPSMG00000021385) #22	ENSPSMG00000021473 #23	ZNF572 (ENSPSMG00000021487) #24	MTSS1 (ENSPSMG00000021624) #25	NDUFB9 (ENSPSMG00000021707) #26	TATDN1 (ENSPSMG00000021818) #27	RNF139 (ENSPSMG00000021899) #28	TMEM65 (ENSPSMG00000021928) #30	FER1L6 (ENSPSMG00000021956) #31	FAM91A1 (ENSPSMG00000021996)	ANXA13 (ENSPSMG00000022020)	KLHL38 (ENSPSMG00000022027)
Coquerels sifaka	MODERN SPECIES	832														TRIB1 (ENSPCOG00000020186) #20	NSMCE2 (ENSPCOG00000026347) #21	WASHC5 (ENSPCOG00000022722) #22	SQLE (ENSPCOG00000022680) #23	ZNF572 (ENSPCOG00000017792) #24	MTSS1 (ENSPCOG00000028564) #25	NDUFB9 (ENSPCOG00000011994) #26	ENSPCOG00000020843 #27	RNF139 (ENSPCOG00000021754) #28	TMEM65 (ENSPCOG00000022110) #30	FER1L6 (ENSPCOG00000018717) #31	FAM91A1 (ENSPCOG00000015240)	ANXA13 (ENSPCOG00000018758)	KLHL38 (ENSPCOG00000013425)	FBXO32 (ENSPCOG00000020699)	NTAQ1 (ENSPCOG00000021245)	ATAD2 (ENSPCOG00000019005)	C8orf76 (ENSPCOG00000016522)
Mouse lemur	MODERN SPECIES	31	TMEM71 (ENSMICG00000043185)	DNAAF11 (ENSMICG00000003622)	KCNQ3 (ENSMICG00000003612)	HHLA1 (ENSMICG00000003609)	OC90 (ENSMICG00000046279)	EFR3A (ENSMICG00000003585)	ADCY8 (ENSMICG00000045984) #13	ASAP1 (ENSMICG00000016241) #14	ENSMICG00000030779 #15	ENSMICG00000027463	MYC (ENSMICG00000014990) ##17	ENSMICG00000042229	LRATD2 (ENSMICG00000043304) #19	TRIB1 (ENSMICG00000041712) #20	NSMCE2 (ENSMICG00000010064) #21	WASHC5 (ENSMICG00000017871) #22	SQLE (ENSMICG00000017870) #23	ZNF572 (ENSMICG00000017483) #24	MTSS1 (ENSMICG00000030483) #25	ENSMICG00000017481 #26	TATDN1 (ENSMICG00000017480) #27	RNF139 (ENSMICG00000017479) #28	TMEM65 (ENSMICG00000045848) #30	FER1L6 (ENSMICG00000042130) #31	FAM91A1 (ENSMICG00000016546)	ANXA13 (ENSMICG00000004605)	KLHL38 (ENSMICG00000030438)	FBXO32 (ENSMICG00000004591)	NTAQ1 (ENSMICG00000036520)	ATAD2 (ENSMICG00000004561)	C8orf76 (ENSMICG00000004551)
Bushbaby	MODERN SPECIES	119							ADCY8 (ENSOGAG00000001459) #13	ASAP1 (ENSOGAG00000002108) #14	CYRIB (ENSOGAG00000002107) #15	ENSOGAG00000000369	ENSOGAG00000002105 #16	MYC (ENSOGAG00000005372) ##17	LRATD2 (ENSOGAG00000032355) #19	TRIB1 (ENSOGAG00000008784) #20	NSMCE2 (ENSOGAG00000015798) #21	WASHC5 (ENSOGAG00000015786) #22	SQLE (ENSOGAG00000015778) #23	ZNF572 (ENSOGAG00000015777) #24	MTSS1 (ENSOGAG00000015853) #25	NDUFB9 (ENSOGAG00000030772) #26	TATDN1 (ENSOGAG00000015849) #27	RNF139 (ENSOGAG00000027959) #28	TRMT12 (ENSOGAG00000015845) #29	TMEM65 (ENSOGAG00000029697) #30	FER1L6 (ENSOGAG00000028552) #31	FAM91A1 (ENSOGAG00000015837)	ANXA13 (ENSOGAG00000012786)	KLHL38 (ENSOGAG00000012781)	ENSOGAG00000028693	FBXO32 (ENSOGAG00000015395)	NTAQ1 (ENSOGAG00000006997)
Haplorrhini	ANCESTRAL SPECIES	19	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147863	ENSGT00910000147614	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Tarsier	MODERN SPECIES	4643																WASHC5 (ENSTSYG00000001899) #22	SQLE (ENSTSYG00000031675) #23	ZNF572 (ENSTSYG00000006409) #24	MTSS1 (ENSTSYG00000035310) #25	NDUFB9 (ENSTSYG00000005515) #26	TATDN1 (ENSTSYG00000001819) #27
Simiiformes	ANCESTRAL SPECIES	20	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Platyrrhini	ANCESTRAL SPECIES	17	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759.g #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809.k #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Cebidae	ANCESTRAL SPECIES	19	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759.g #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809.k #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Cebidae_a	ANCESTRAL SPECIES	71	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759.g #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809.k #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Capuchin	MODERN SPECIES	68													TRIB1 (ENSCCAG00000035633) #20	ENSCCAG00000031329	NSMCE2 (ENSCCAG00000033882) #21	WASHC5 (ENSCCAG00000024628) #22	SQLE (ENSCCAG00000027661) #23	ZNF572 (ENSCCAG00000034265) #24	MTSS1 (ENSCCAG00000025033) #25	NDUFB9 (ENSCCAG00000027243) #26	TATDN1 (ENSCCAG00000035961) #27	RNF139 (ENSCCAG00000032848) #28	TMEM65 (ENSCCAG00000024042) #30	FER1L6 (ENSCCAG00000034753) #31	ENSCCAG00000031680	ANXA13 (ENSCCAG00000027376)	KLHL38 (ENSCCAG00000023727)	FBXO32 (ENSCCAG00000023147)	NTAQ1 (ENSCCAG00000021917)	ATAD2 (ENSCCAG00000000396)	ZHX1 (ENSCCAG00000019797)
Bolivian squirrel monkey	MODERN SPECIES	100	HHLA1 (ENSSBOG00000025546)	OC90 (ENSSBOG00000031793)	EFR3A (ENSSBOG00000025497)	ADCY8 (ENSSBOG00000024320) #13	ASAP1 (ENSSBOG00000035648) #14	CYRIB (ENSSBOG00000028511) #15	ENSSBOG00000027549	MYC (ENSSBOG00000025820) ##17	ENSSBOG00000023594	LRATD2 (ENSSBOG00000011855) #19	ENSSBOG00000033140	TRIB1 (ENSSBOG00000028374) #20	ENSSBOG00000033013	NSMCE2 (ENSSBOG00000034129) #21	ENSSBOG00000023897	WASHC5 (ENSSBOG00000033285) #22	SQLE (ENSSBOG00000034968) #23	ZNF572 (ENSSBOG00000035811) #24	MTSS1 (ENSSBOG00000034182) #25	NDUFB9 (ENSSBOG00000035468) #26	TATDN1 (ENSSBOG00000023254) #27	RNF139 (ENSSBOG00000018889) #28	ENSSBOG00000029037 #30	FER1L6 (ENSSBOG00000033386) #31	FAM91A1 (ENSSBOG00000030311)	ANXA13 (ENSSBOG00000026431)	KLHL38 (ENSSBOG00000005156)	FBXO32 (ENSSBOG00000026698)
Marmoset	MODERN SPECIES	7	ADCY8 (ENSCJAG00000004325) #13	ENSCJAG00000073168	ASAP1 (ENSCJAG00000012483) #14	CYRIB (ENSCJAG00000012575) #15	ENSCJAG00000012609 #16	ENSCJAG00000061719	MYC (ENSCJAG00000012620) ##17	ENSCJAG00000042413	ENSCJAG00000080210	ENSCJAG00000068180	LRATD2 (ENSCJAG00000012629) #19	ENSCJAG00000074784	TRIB1 (ENSCJAG00000061218) #20	NSMCE2 (ENSCJAG00000012645) #21	ENSCJAG00000082058	WASHC5 (ENSCJAG00000012651) #22	SQLE (ENSCJAG00000012744) #23	ZNF572 (ENSCJAG00000060682) #24	MTSS1 (ENSCJAG00000012784) #25	NDUFB9 (ENSCJAG00000012818) #26	TATDN1 (ENSCJAG00000012826) #27	RNF139 (ENSCJAG00000038974) #28	TRMT12 (ENSCJAG00000022174) #29	TMEM65 (ENSCJAG00000000756) #30	ENSCJAG00000073926	FER1L6 (ENSCJAG00000082085) #31	FAM91A1 (ENSCJAG00000000803)	ANXA13 (ENSCJAG00000000819)	KLHL38 (ENSCJAG00000000837)	FBXO32 (ENSCJAG00000000844)	NTAQ1 (ENSCJAG00000000865)
Mas night monkey	MODERN SPECIES	729									MYC (ENSANAG00000024521) ##17	LRATD2 (ENSANAG00000019242) #19	ENSANAG00000028994	ENSANAG00000026391	TRIB1 (ENSANAG00000020092) #20	NSMCE2 (ENSANAG00000035224) #21	ENSANAG00000020959	WASHC5 (ENSANAG00000023378) #22	ENSANAG00000032384 #23	ZNF572 (ENSANAG00000019228) #24	MTSS1 (ENSANAG00000020239) #25	ENSANAG00000029867 #26	TATDN1 (ENSANAG00000032344) #27	RNF139 (ENSANAG00000019348) #28	TMEM65 (ENSANAG00000025471) #30	FER1L6 (ENSANAG00000025928) #31	FAM91A1 (ENSANAG00000032395)	ANXA13 (ENSANAG00000025536)	KLHL38 (ENSANAG00000020814)	FBXO32 (ENSANAG00000034454)	ENSANAG00000025283	NTAQ1 (ENSANAG00000027919)	ATAD2 (ENSANAG00000021145)
Catarrhini	ANCESTRAL SPECIES	15	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT01000000215309	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00910000147017	ENSGT00940000159198 #19	ENSGT00500000044955.j.a.a	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Cercopithecidae	ANCESTRAL SPECIES	14	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT01020000230401.a.a.b.b.s.a.i	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT01000000215309	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00910000147017	ENSGT00940000159198 #19	ENSGT00500000044955.j.a.a	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961.b.a #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Cercopithecinae	ANCESTRAL SPECIES	16	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT01020000230401.a.a.b.b.s.a.i	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT01000000215309	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00910000147017	ENSGT00940000159198 #19	ENSGT00500000044955.j.a.a	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961.b.a #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Cercopithecinae_a	ANCESTRAL SPECIES	15	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT01020000230401.a.a.b.b.s.a.i	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT01000000215309	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00910000147017	ENSGT00940000159198 #19	ENSGT00500000044955.j.a.a	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961.b.a #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Macaca	ANCESTRAL SPECIES	14	ENSGT00390000002143.a	ENSGT01020000230401.a.a.b.b.s.a.i	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT01000000215309	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00910000147017	ENSGT00940000159198 #19	ENSGT00390000004856.w.a.a.b.b.a.b.b.b	ENSGT00950000182986.a.b.b #20	ENSGT00940000164859	ENSGT00390000013961.a #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Pig-tailed macaque	MODERN SPECIES	419	ENSMNEG00000005648	PRR32 (ENSMNEG00000028118)	ACTRT1 (ENSMNEG00000021005)	ENSMNEG00000039781	ENSMNEG00000029813	SMARCA1 (ENSMNEG00000041768)	OCRL (ENSMNEG00000039517)	APLN (ENSMNEG00000025745)	XPNPEP2 (ENSMNEG00000011460)	SASH3 (ENSMNEG00000025559)	ZDHHC9 (ENSMNEG00000034484)	UTP14A (ENSMNEG00000038730)	BCORL1 (ENSMNEG00000030847)	ELF4 (ENSMNEG00000042904)	ENSMNEG00000022321 #21	WASHC5 (ENSMNEG00000027732) #22	SQLE (ENSMNEG00000038543) #23	ZNF572 (ENSMNEG00000044566) #24	MTSS1 (ENSMNEG00000029086) #25	NDUFB9 (ENSMNEG00000038946) #26	TATDN1 (ENSMNEG00000044367) #27	RNF139 (ENSMNEG00000043580) #28	ENSMNEG00000035764	TMEM65 (ENSMNEG00000043831) #30	FER1L6 (ENSMNEG00000027977) #31	FAM91A1 (ENSMNEG00000031470)	ANXA13 (ENSMNEG00000045289)	KLHL38 (ENSMNEG00000036823)	ENSMNEG00000044312	FBXO32 (ENSMNEG00000032524)	NTAQ1 (ENSMNEG00000045030)
Macaca_a	ANCESTRAL SPECIES	16	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.b.a.a.a.a.a.b.b	ENSGT00940000159198 #19	ENSGT00390000004856.w.a.a.b.b.a.b.b.b	ENSGT00950000182986.a.b.b #20	ENSGT00910000147472.a.b.a	ENSGT00390000013961.b.a #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Crab-eating macaque	MODERN SPECIES	18	ADCY8 (ENSMFAG00000000140) #13	ASAP1 (ENSMFAG00000044993) #14	CYRIB (ENSMFAG00000042222) #15	GSDMC (ENSMFAG00000001675) #16	MYC (ENSMFAG00000034186) ##17	ENSMFAG00000042070	ENSMFAG00000053467	ENSMFAG00000057427	LRATD2 (ENSMFAG00000033576) #19	ENSMFAG00000026576	ENSMFAG00000063557	TRIB1 (ENSMFAG00000002866) #20	ENSMFAG00000052447	ENSMFAG00000050212	NSMCE2 (ENSMFAG00000042438) #21	WASHC5 (ENSMFAG00000031164) #22	SQLE (ENSMFAG00000043907) #23	ZNF572 (ENSMFAG00000031662) #24	MTSS1 (ENSMFAG00000045642) #25	NDUFB9 (ENSMFAG00000003181) #26	TATDN1 (ENSMFAG00000037399) #27	RNF139 (ENSMFAG00000039167) #28	TRMT12 (ENSMFAG00000042869) #29	TMEM65 (ENSMFAG00000059304) #30	ENSMFAG00000052783	ENSMFAG00000050536	ENSMFAG00000051946	FER1L6 (ENSMFAG00000022397) #31	FAM91A1 (ENSMFAG00000000206)	ENSMFAG00000008314	KLHL38 (ENSMFAG00000036573)
Rhesus	MODERN SPECIES	18	ADCY8 (ENSMMUG00000010440) #13	ASAP1 (ENSMMUG00000012145) #14	CYRIB (ENSMMUG00000015348) #15	GSDMC (ENSMMUG00000015345) #16	MYC (ENSMMUG00000014601) ##17	ENSMMUG00000040527	ENSMMUG00000050509	LRATD2 (ENSMMUG00000047109) #19	ENSMMUG00000053247	ENSMMUG00000046772	ENSMMUG00000053718	ENSMMUG00000050894	TRIB1 (ENSMMUG00000021759) #20	ENSMMUG00000064591	NSMCE2 (ENSMMUG00000003542) #21	WASHC5 (ENSMMUG00000003538) #22	SQLE (ENSMMUG00000003535) #23	ZNF572 (ENSMMUG00000051484) #24	ENSMMUG00000058362	MTSS1 (ENSMMUG00000015494) #25	NDUFB9 (ENSMMUG00000015493) #26	TATDN1 (ENSMMUG00000064789) #27	RNF139 (ENSMMUG00000015491) #28	TRMT12 (ENSMMUG00000015490) #29	TMEM65 (ENSMMUG00000054755) #30	ENSMMUG00000050007	FER1L6 (ENSMMUG00000016375) #31	FAM91A1 (ENSMMUG00000019646)	ANXA13 (ENSMMUG00000063044)	KLHL38 (ENSMMUG00000019149)	ENSMMUG00000054878
Cercopithecinae_b	ANCESTRAL SPECIES	9	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT01020000230401.a.a.b.b.s.a.i	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT01000000215309	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00910000147017	ENSGT00940000159198 #19	ENSGT00500000044955.j.a.a	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961.b.a #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Olive baboon	MODERN SPECIES	18	ENSPANG00000037000	ASAP1 (ENSPANG00000024473) #14	GSDMC (ENSPANG00000034742) #16	CYRIB (ENSPANG00000003127) #15	ENSPANG00000038883	ENSPANG00000051328	ENSPANG00000040141	MYC (ENSPANG00000010418) ##17	ENSPANG00000035691	LRATD2 (ENSPANG00000010401) #19	ENSPANG00000042446	ENSPANG00000046685	TRIB1 (ENSPANG00000039486) #20	ENSPANG00000051042	NSMCE2 (ENSPANG00000010438) #21	WASHC5 (ENSPANG00000008560) #22	SQLE (ENSPANG00000005609) #23	ZNF572 (ENSPANG00000024290) #24	ENSPANG00000045310	MTSS1 (ENSPANG00000020339) #25	NDUFB9 (ENSPANG00000006668) #26	TATDN1 (ENSPANG00000001330) #27	RNF139 (ENSPANG00000015394) #28	TRMT12 (ENSPANG00000009422) #29	TMEM65 (ENSPANG00000012320) #30	ENSPANG00000048720	ENSPANG00000038153	FER1L6 (ENSPANG00000024156) #31	FAM91A1 (ENSPANG00000024994)	ANXA13 (ENSPANG00000008190)	KLHL38 (ENSPANG00000012321)
Cercopithecinae_d	ANCESTRAL SPECIES	78	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT01020000230401.a.a.b.b.s.a.i	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT01000000215309	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00910000147017	ENSGT00940000159198 #19	ENSGT00500000044955.j.a.a	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961.b.a #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00940000154156.d.n.b.b.a.b
Drill	MODERN SPECIES	646									MYC (ENSMLEG00000032954) ##17	ENSMLEG00000027474	LRATD2 (ENSMLEG00000027434) #19	ENSMLEG00000038205	ENSMLEG00000040067	TRIB1 (ENSMLEG00000002006) #20	ENSMLEG00000006698 #21	WASHC5 (ENSMLEG00000039974) #22	ADGRB3 (ENSMLEG00000028840)	ENSMLEG00000028077	ENSMLEG00000023901
Sooty mangabey	MODERN SPECIES	285											ENSCATG00000019462	LRATD2 (ENSCATG00000018947) #19	ENSCATG00000044517	TRIB1 (ENSCATG00000044240) #20	ENSCATG00000040213 #21	WASHC5 (ENSCATG00000034631) #22	SQLE (ENSCATG00000033554) #23	ZNF572 (ENSCATG00000030884) #24	MTSS1 (ENSCATG00000037913) #25	ENSCATG00000028852 #26	TATDN1 (ENSCATG00000040674) #27	RNF139 (ENSCATG00000035470) #28	TMEM65 (ENSCATG00000022254) #30	FER1L6 (ENSCATG00000035414) #31	FAM91A1 (ENSCATG00000045013)	ANXA13 (ENSCATG00000001971)	KLHL38 (ENSCATG00000034985)	ENSCATG00000036015	FBXO32 (ENSCATG00000036295)	NTAQ1 (ENSCATG00000037335)	ENSCATG00000026817
Vervet Monkey	MODERN SPECIES	27	PHF20L1 (ENSCSAG00000009894)	TMEM71 (ENSCSAG00000009905)	DNAAF11 (ENSCSAG00000009917)	KCNQ3 (ENSCSAG00000009982)	HHLA1 (ENSCSAG00000010004)	OC90 (ENSCSAG00000010023)	EFR3A (ENSCSAG00000010073)	ADCY8 (ENSCSAG00000010082) #13	ASAP1 (ENSCSAG00000010095) #14	CYRIB (ENSCSAG00000010103) #15	ENSCSAG00000018619	MYC (ENSCSAG00000010109) ##17	LRATD2 (ENSCSAG00000018618) #19	TRIB1 (ENSCSAG00000010133) #20	NSMCE2 (ENSCSAG00000010141) #21	WASHC5 (ENSCSAG00000010152) #22	SQLE (ENSCSAG00000010159) #23	ZNF572 (ENSCSAG00000010162) #24	MTSS1 (ENSCSAG00000010172) #25	NDUFB9 (ENSCSAG00000010175) #26	TATDN1 (ENSCSAG00000010183) #27	RNF139 (ENSCSAG00000010187) #28	TRMT12 (ENSCSAG00000018615) #29	FER1L6 (ENSCSAG00000010361) #31	FAM91A1 (ENSCSAG00000010470)	ANXA13 (ENSCSAG00000010507)	KLHL38 (ENSCSAG00000010511)	FBXO32 (ENSCSAG00000010523)	NTAQ1 (ENSCSAG00000010530)	ATAD2 (ENSCSAG00000010591)	ZHX1 (ENSCSAG00000010631)
Rhinopithecus	ANCESTRAL SPECIES	178											ENSGT00910000147017	ENSGT00940000159198 #19	ENSGT00390000004856.w.a.a.b.b.a.b.b.b	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961.b.a #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183029.B.c.b.b.a.d.c.a	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Black snub-nosed monkey	MODERN SPECIES	810												ENSRBIG00000030667	ENSRBIG00000029327	TRIB1 (ENSRBIG00000036938) #20	ENSRBIG00000003510 #21	WASHC5 (ENSRBIG00000036256) #22	SQLE (ENSRBIG00000041064) #23	ENSRBIG00000038308 #24	ENSRBIG00000037789 #24	ENSRBIG00000043584	MTSS1 (ENSRBIG00000016678) #25	ENSRBIG00000039658 #26	TATDN1 (ENSRBIG00000032007) #27	RNF139 (ENSRBIG00000026240) #28	TMEM65 (ENSRBIG00000028669) #30
Golden snub-nosed monkey	MODERN SPECIES	1112															ENSRROG00000037521 #21	WASHC5 (ENSRROG00000040310) #22	SQLE (ENSRROG00000032217) #23	ZNF572 (ENSRROG00000027983) #24	ENSRROG00000040095	MTSS1 (ENSRROG00000038111) #25	NDUFB9 (ENSRROG00000034158) #26	TATDN1 (ENSRROG00000033274) #27	RNF139 (ENSRROG00000042987) #28	TMEM65 (ENSRROG00000011918) #30	FER1L6 (ENSRROG00000041223) #31	FAM91A1 (ENSRROG00000038666)	ANXA13 (ENSRROG00000035807)	KLHL38 (ENSRROG00000030661)	ENSRROG00000002525	FBXO32 (ENSRROG00000040723)	NTAQ1 (ENSRROG00000031115)
Hominoidea	ANCESTRAL SPECIES	14	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT01000000215309	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00910000147017	ENSGT00940000159198 #19	ENSGT00500000044955.j.a.a	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809.m.a #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Gibbon	MODERN SPECIES	6	HHLA1 (ENSNLEG00000034486)	OC90 (ENSNLEG00000005732)	EFR3A (ENSNLEG00000005667)	ADCY8 (ENSNLEG00000005650) #13	ASAP1 (ENSNLEG00000005606) #14	ENSNLEG00000028422	CYRIB (ENSNLEG00000005582) #15	GSDMC (ENSNLEG00000005577) #16	ENSNLEG00000033275	ENSNLEG00000032620	MYC (ENSNLEG00000005570) ##17	LRATD2 (ENSNLEG00000029787) #19	ENSNLEG00000027471	TRIB1 (ENSNLEG00000005564) #20	NSMCE2 (ENSNLEG00000005554) #21	WASHC5 (ENSNLEG00000026804) #22	SQLE (ENSNLEG00000005530) #23	ZNF572 (ENSNLEG00000005528) #24	ENSNLEG00000027218	MTSS1 (ENSNLEG00000005496) #25	ENSNLEG00000027636 #26	TATDN1 (ENSNLEG00000005467) #27	RNF139 (ENSNLEG00000005465) #28	TMEM65 (ENSNLEG00000033274) #30	FER1L6 (ENSNLEG00000005422) #31	FAM91A1 (ENSNLEG00000005385)	ANXA13 (ENSNLEG00000005362)	KLHL38 (ENSNLEG00000005357)	FBXO32 (ENSNLEG00000005338)	NTAQ1 (ENSNLEG00000005332)	ATAD2 (ENSNLEG00000005310)
Hominidae	ANCESTRAL SPECIES	15	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT01000000215309	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00910000147017	ENSGT00940000159198 #19	ENSGT00500000044955.j.a.a	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809.m.a #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Orangutan	MODERN SPECIES	21	TMEM71 (ENSPPYG00000018890)	DNAAF11 (ENSPPYG00000018889)	KCNQ3 (ENSPPYG00000018888)	HHLA1 (ENSPPYG00000033263)	OC90 (ENSPPYG00000018887)	EFR3A (ENSPPYG00000018886)	ADCY8 (ENSPPYG00000018885) #13	ASAP1 (ENSPPYG00000018884) #14	CYRIB (ENSPPYG00000018883) #15	GSDMC (ENSPPYG00000018882) #16	MYC (ENSPPYG00000018878) ##17	ENSPPYG00000037779	LRATD2 (ENSPPYG00000018876) #19	TRIB1 (ENSPPYG00000018875) #20	NSMCE2 (ENSPPYG00000018874) #21	WASHC5 (ENSPPYG00000018873) #22	SQLE (ENSPPYG00000018872) #23	ZNF572 (ENSPPYG00000018871) #24	MTSS1 (ENSPPYG00000018870) #25	ENSPPYG00000018869 #26	TATDN1 (ENSPPYG00000032347) #27	RNF139 (ENSPPYG00000018867) #28	TRMT12 (ENSPPYG00000018866) #29	TMEM65 (ENSPPYG00000018865) #30	FER1L6 (ENSPPYG00000018861) #31	FAM91A1 (ENSPPYG00000018860)	ANXA13 (ENSPPYG00000018859)	KLHL38 (ENSPPYG00000019017)	FBXO32 (ENSPPYG00000018858)	NTAQ1 (ENSPPYG00000019969)	ATAD2 (ENSPPYG00000018857)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	13	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00550000076451.b	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT01000000215309	ENSGT00390000015159.b.o #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00910000147017	ENSGT00940000159198 #19	ENSGT00500000044955.j.a.a	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809.m.a #26	ENSGT00940000156272.g #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Gorilla	MODERN SPECIES	21	OC90 (ENSGGOG00000001073)	EFR3A (ENSGGOG00000024611)	ENSGGOG00000041834	ADCY8 (ENSGGOG00000015786) #13	ASAP1 (ENSGGOG00000008718) #14	ENSGGOG00000041093	ENSGGOG00000025442	CYRIB (ENSGGOG00000006550) #15	GSDMC (ENSGGOG00000004341) #16	MYC (ENSGGOG00000012135) ##17	ENSGGOG00000039145	LRATD2 (ENSGGOG00000042455) #19	ENSGGOG00000024602	TRIB1 (ENSGGOG00000005304) #20	NSMCE2 (ENSGGOG00000008184) #21	ENSGGOG00000043611 #22	SQLE (ENSGGOG00000007317) #23	ZNF572 (ENSGGOG00000006964) #24	MTSS1 (ENSGGOG00000034997) #25	ENSGGOG00000015883 #26	TATDN1 (ENSGGOG00000015875) #27	RNF139 (ENSGGOG00000000693) #28	TMEM65 (ENSGGOG00000041843) #30	FER1L6 (ENSGGOG00000011502) #31	FAM91A1 (ENSGGOG00000011268)	ANXA13 (ENSGGOG00000008148)	KLHL38 (ENSGGOG00000006261)	FBXO32 (ENSGGOG00000002976)	NTAQ1 (ENSGGOG00000010298)	ATAD2 (ENSGGOG00000009390)	ZHX1 (ENSGGOG00000028565)
Homo/Pan group	ANCESTRAL SPECIES	12	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00550000076451.b	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT01000000215309	ENSGT00390000015159.b.o #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00910000147017	ENSGT00940000159198 #19	ENSGT00500000044955.j.a.a	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809.m.a #26	ENSGT00940000156272.g #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Pan	ANCESTRAL SPECIES	11	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00550000076451.b	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT01000000215309	ENSGT00390000015159.b.o #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00910000147614	ENSGT00910000147017	ENSGT00940000159198 #19	ENSGT00500000044955.j.a.a	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809.m.a #26	ENSGT00940000156272.g #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543.c	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Chimpanzee	MODERN SPECIES	21	OC90 (ENSPTRG00000020592)	EFR3A (ENSPTRG00000020591)	ADCY8 (ENSPTRG00000020589) #13	ENSPTRG00000045712	ASAP1 (ENSPTRG00000020587) #14	CYRIB (ENSPTRG00000020585) #15	GSDMC (ENSPTRG00000020584) #16	MYC (ENSPTRG00000020581) ##17	ENSPTRG00000046851	POU5F1B (ENSPTRG00000001427)	ENSPTRG00000052764	LRATD2 (ENSPTRG00000043511) #19	ENSPTRG00000048629	TRIB1 (ENSPTRG00000020576) #20	NSMCE2 (ENSPTRG00000020574) #21	WASHC5 (ENSPTRG00000020573) #22	SQLE (ENSPTRG00000020572) #23	ZNF572 (ENSPTRG00000020571) #24	MTSS1 (ENSPTRG00000020570) #25	NDUFB9 (ENSPTRG00000020569) #26	TATDN1 (ENSPTRG00000046819) #27	RNF139 (ENSPTRG00000020567) #28	TMEM65 (ENSPTRG00000020565) #30	FER1L6 (ENSPTRG00000034198) #31	FAM91A1 (ENSPTRG00000020560)	ANXA13 (ENSPTRG00000023152)	KLHL38 (ENSPTRG00000020556)	ENSPTRG00000044645	FBXO32 (ENSPTRG00000020555)	NTAQ1 (ENSPTRG00000020554)	ATAD2 (ENSPTRG00000020551)
Bonobo	MODERN SPECIES	21	EFR3A (ENSPPAG00000037366)	ENSPPAG00000036283	ADCY8 (ENSPPAG00000037493) #13	ENSPPAG00000037474	ASAP1 (ENSPPAG00000041936) #14	CYRIB (ENSPPAG00000042549) #15	GSDMC (ENSPPAG00000038920) #16	MYC (ENSPPAG00000026360) ##17	ENSPPAG00000020968	ENSPPAG00000043086	ENSPPAG00000024316	LRATD2 (ENSPPAG00000011295) #19	ENSPPAG00000041161	TRIB1 (ENSPPAG00000038966) #20	NSMCE2 (ENSPPAG00000042888) #21	WASHC5 (ENSPPAG00000036975) #22	SQLE (ENSPPAG00000044116) #23	ZNF572 (ENSPPAG00000043986) #24	MTSS1 (ENSPPAG00000028285) #25	NDUFB9 (ENSPPAG00000039525) #26	TATDN1 (ENSPPAG00000032418) #27	RNF139 (ENSPPAG00000031040) #28	ENSPPAG00000031017 #30	FER1L6 (ENSPPAG00000031359) #31	FAM91A1 (ENSPPAG00000031358)	ANXA13 (ENSPPAG00000021330)	KLHL38 (ENSPPAG00000028258)	ENSPPAG00000030536	FBXO32 (ENSPPAG00000011718)	NTAQ1 (ENSPPAG00000042607)	ATAD2 (ENSPPAG00000042913)
Human	MODERN SPECIES	20	DNAAF11 (ENSG00000129295)	KCNQ3 (ENSG00000184156)	HHLA1 (ENSG00000132297)	ENSG00000258417	OC90 (ENSG00000253117)	EFR3A (ENSG00000132294)	ADCY8 (ENSG00000155897) #13	ASAP1 (ENSG00000153317) #14	CYRIB (ENSG00000153310) #15	GSDMC (ENSG00000147697) #16	MYC (ENSG00000136997) ##17	POU5F1B (ENSG00000212993)	LRATD2 (ENSG00000168672) #19	TRIB1 (ENSG00000173334) #20	NSMCE2 (ENSG00000156831) #21	WASHC5 (ENSG00000164961) #22	SQLE (ENSG00000104549) #23	ZNF572 (ENSG00000180938) #24	MTSS1 (ENSG00000170873) #25	NDUFB9 (ENSG00000147684) #26	TATDN1 (ENSG00000147687) #27	RNF139 (ENSG00000170881) #28	TRMT12 (ENSG00000183665) #29	TMEM65 (ENSG00000164983) #30	FER1L6 (ENSG00000214814) #31	FAM91A1 (ENSG00000176853)	ANXA13 (ENSG00000104537)	KLHL38 (ENSG00000175946)	FBXO32 (ENSG00000156804)	NTAQ1 (ENSG00000156795)	ATAD2 (ENSG00000156802)
Laurasiatheria	ANCESTRAL SPECIES	18	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Laurasiatheria_a	ANCESTRAL SPECIES	20	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Artiodactyla	ANCESTRAL SPECIES	20	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Suina	ANCESTRAL SPECIES	26	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Pig	MODERN SPECIES	12	KCNQ3 (ENSSSCG00000005953)	HHLA1 (ENSSSCG00000022257)	OC90 (ENSSSCG00000005954)	EFR3A (ENSSSCG00000005955)	ADCY8 (ENSSSCG00000031717) #13	ASAP1 (ENSSSCG00000028759) #14	ENSSSCG00000005959 #15	ENSSSCG00000005961 ##16	ENSSSCG00000005962 #16	MYC (ENSSSCG00000005965) ##17	LRATD2 (ENSSSCG00000005967) #19	ENSSSCG00000052155	TRIB1 (ENSSSCG00000038500) #20	ENSSSCG00000012120	NSMCE2 (ENSSSCG00000037755) #21	WASHC5 (ENSSSCG00000005969) #22	SQLE (ENSSSCG00000005970) #23	ENSSSCG00000056270	ENSSSCG00000005971 #24	MTSS1 (ENSSSCG00000005975) #25	NDUFB9 (ENSSSCG00000005976) #26	TATDN1 (ENSSSCG00000030603) #27	RNF139 (ENSSSCG00000024412) #28	TMEM65 (ENSSSCG00000040731) #30	FER1L6 (ENSSSCG00000033333) #31	FAM91A1 (ENSSSCG00000024424)	ANXA13 (ENSSSCG00000005979)	KLHL38 (ENSSSCG00000035521)	FBXO32 (ENSSSCG00000005981)	NTAQ1 (ENSSSCG00000005982)	ATAD2 (ENSSSCG00000005983)
Chacoan peccary	MODERN SPECIES	114	TMEM71 (ENSCWAG00000019433)	DNAAF11 (ENSCWAG00000019357)	KCNQ3 (ENSCWAG00000019231)	HHLA1 (ENSCWAG00000019148)	OC90 (ENSCWAG00000019067)	EFR3A (ENSCWAG00000018922)	ADCY8 (ENSCWAG00000018744) #13	ASAP1 (ENSCWAG00000018438) #14	CYRIB (ENSCWAG00000018368) #15	ENSCWAG00000018297 #16	MYC (ENSCWAG00000018238) ##17	ENSCWAG00000018220	LRATD2 (ENSCWAG00000018208) #19	TRIB1 (ENSCWAG00000018120) #20	NSMCE2 (ENSCWAG00000018058) #21	WASHC5 (ENSCWAG00000017977) #22	SQLE (ENSCWAG00000017872) #23	ZNF572 (ENSCWAG00000017851) #24	MTSS1 (ENSCWAG00000017755) #25	NDUFB9 (ENSCWAG00000017673) #26	TATDN1 (ENSCWAG00000017505) #27	RNF139 (ENSCWAG00000017451) #28	TRMT12 (ENSCWAG00000017443) #29	TMEM65 (ENSCWAG00000017387) #30	FER1L6 (ENSCWAG00000017135) #31	FAM91A1 (ENSCWAG00000017020)	ANXA13 (ENSCWAG00000016883)	KLHL38 (ENSCWAG00000016842)	FBXO32 (ENSCWAG00000016716)	NTAQ1 (ENSCWAG00000016564)	ATAD2 (ENSCWAG00000016495)
Artiodactyla_a	ANCESTRAL SPECIES	20	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Artiodactyla_b	ANCESTRAL SPECIES	20	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Cetacea	ANCESTRAL SPECIES	17	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00390000012916.y.a.d	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Odontoceti	ANCESTRAL SPECIES	20	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00390000012916.y.a.d	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Odontoceti_a	ANCESTRAL SPECIES	17	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00390000012916.y.a.d	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Odontoceti_b	ANCESTRAL SPECIES	19	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00390000012916.y.a.d	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Monodontidae	ANCESTRAL SPECIES	20	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00390000012916.y.a.d	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000172644	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Beluga whale	MODERN SPECIES	57	ENSDLEG00000019106	TMEM71 (ENSDLEG00000019088)	LRRC6 (ENSDLEG00000019072)	KCNQ3 (ENSDLEG00000019040)	HHLA1 (ENSDLEG00000019016)	OC90 (ENSDLEG00000019004)	EFR3A (ENSDLEG00000018988)	ADCY8 (ENSDLEG00000018929) #13	ENSDLEG00000018913	ASAP1 (ENSDLEG00000018845) #14	FAM49B (ENSDLEG00000018823) #15	MYC (ENSDLEG00000018814) ##17	FAM84B (ENSDLEG00000018810) #19	TRIB1 (ENSDLEG00000018798) #20	NSMCE2 (ENSDLEG00000018794) #21	WASHC5 (ENSDLEG00000018762) #22	SQLE (ENSDLEG00000018746) #23	ZNF572 (ENSDLEG00000018743) #24	MTSS1 (ENSDLEG00000018717) #25	NDUFB9 (ENSDLEG00000018709) #26	TATDN1 (ENSDLEG00000018702) #27	RNF139 (ENSDLEG00000018696) #28	ENSDLEG00000018692	ENSDLEG00000018683	FER1L6 (ENSDLEG00000018301) #31	FAM91A1 (ENSDLEG00000018209)	ANXA13 (ENSDLEG00000018180)	KLHL38 (ENSDLEG00000018170)	ENSDLEG00000018165	FBXO32 (ENSDLEG00000018148)	WDYHV1 (ENSDLEG00000018127)
Narwhal	MODERN SPECIES	300	DNAAF11 (ENSMMNG00015004267)	KCNQ3 (ENSMMNG00015004293)	HHLA1 (ENSMMNG00015004342)	OC90 (ENSMMNG00015004367)	EFR3A (ENSMMNG00015004424)	ADCY8 (ENSMMNG00015004512) #13	ENSMMNG00015004551	ASAP1 (ENSMMNG00015004594) #14	CYRIB (ENSMMNG00015004641) #15	MYC (ENSMMNG00015004654) ##17	ENSMMNG00015004659	LRATD2 (ENSMMNG00015004660) #19	ENSMMNG00015004664	TRIB1 (ENSMMNG00015004674) #20	NSMCE2 (ENSMMNG00015009199) #21	WASHC5 (ENSMMNG00015009211) #22	SQLE (ENSMMNG00015009242) #23	ZNF572 (ENSMMNG00015009254) #24	MTSS1 (ENSMMNG00015009268) #25	NDUFB9 (ENSMMNG00015009315) #26	TATDN1 (ENSMMNG00015009343) #27	RNF139 (ENSMMNG00015009367) #28	ENSMMNG00015009376	TMEM65 (ENSMMNG00015009382) #30	FER1L6 (ENSMMNG00015009399) #31	FAM91A1 (ENSMMNG00015009428)	ANXA13 (ENSMMNG00015009456)	KLHL38 (ENSMMNG00015009499)	FBXO32 (ENSMMNG00015009534)	NTAQ1 (ENSMMNG00015009570)	ATAD2 (ENSMMNG00015009608)
Vaquita	MODERN SPECIES	8	DNAAF11 (ENSPSNG00000016918)	KCNQ3 (ENSPSNG00000016477)	HHLA1 (ENSPSNG00000016271)	OC90 (ENSPSNG00000016074)	EFR3A (ENSPSNG00000015825)	ADCY8 (ENSPSNG00000015324) #13	ENSPSNG00000015244	ASAP1 (ENSPSNG00000015168) #14	CYRIB (ENSPSNG00000015032) #15	MYC (ENSPSNG00000014921) ##17	ENSPSNG00000014896	ENSPSNG00000014849	LRATD2 (ENSPSNG00000014803) #19	TRIB1 (ENSPSNG00000014706) #20	NSMCE2 (ENSPSNG00000014603) #21	WASHC5 (ENSPSNG00000014412) #22	SQLE (ENSPSNG00000014136) #23	ZNF572 (ENSPSNG00000014048) #24	MTSS1 (ENSPSNG00000013959) #25	NDUFB9 (ENSPSNG00000013777) #26	TATDN1 (ENSPSNG00000013367) #27	RNF139 (ENSPSNG00000013258) #28	TRMT12 (ENSPSNG00000013218) #29	TMEM65 (ENSPSNG00000013119) #30	FER1L6 (ENSPSNG00000012680) #31	FAM91A1 (ENSPSNG00000012606)	ANXA13 (ENSPSNG00000012343)	KLHL38 (ENSPSNG00000012264)	FBXO32 (ENSPSNG00000012180)	ENSPSNG00000012049	ATAD2 (ENSPSNG00000011951)
Dolphin	MODERN SPECIES	2217														TRIB1 (ENSTTRG00000015530) #20	NSMCE2 (ENSTTRG00000015524) #21	WASHC5 (ENSTTRG00000015507) #22	SQLE (ENSTTRG00000015495) #23	ZNF572 (ENSTTRG00000015484) #24
Sperm whale	MODERN SPECIES	6	LRRC6 (ENSPCTG00005020472)	HHLA1 (ENSPCTG00005020844)	ENSPCTG00005020919	EFR3A (ENSPCTG00005021004)	ENSPCTG00005021114	ADCY8 (ENSPCTG00005021141) #13	ENSPCTG00005007514	ASAP1 (ENSPCTG00005007568) #14	LRATD2 (ENSPCTG00005007729) #19	ENSPCTG00005007738	FAM49B (ENSPCTG00005007755) #15	ENSPCTG00005007786 ##16	ENSPCTG00005007801 #20	ENSPCTG00005007811 #20	NSMCE2 (ENSPCTG00005007821) #21	WASHC5 (ENSPCTG00005007886) #22	SQLE (ENSPCTG00005008186) #23	ZNF572 (ENSPCTG00005008233) #24	MTSS1 (ENSPCTG00005008273) #25	NDUFB9 (ENSPCTG00005008441) #26	TATDN1 (ENSPCTG00005008593) #27	RNF139 (ENSPCTG00005008926) #28	ENSPCTG00005008957	TMEM65 (ENSPCTG00005009003) #30	FER1L6 (ENSPCTG00005009103) #31	FAM91A1 (ENSPCTG00005009498)	ENSPCTG00005009674	FBXO32 (ENSPCTG00005009727)	ATAD2 (ENSPCTG00005009813)	C15H8orf76 (ENSPCTG00005009910)	FAM83A (ENSPCTG00005010032)
Blue whale	MODERN SPECIES	8	TMEM71 (ENSBMSG00010017212)	DNAAF11 (ENSBMSG00010017343)	KCNQ3 (ENSBMSG00010017717)	HHLA1 (ENSBMSG00010017920)	OC90 (ENSBMSG00010017991)	EFR3A (ENSBMSG00010018091)	ADCY8 (ENSBMSG00010018305) #13	ENSBMSG00010018469	ASAP1 (ENSBMSG00010018519) #14	ENSBMSG00010018725 #15	ENSBMSG00010018757 #16	MYC (ENSBMSG00010018783) ##17	LRATD2 (ENSBMSG00010018810) #19	TRIB1 (ENSBMSG00010018829) #20	NSMCE2 (ENSBMSG00010018858) #21	WASHC5 (ENSBMSG00010018931) #22	SQLE (ENSBMSG00010019196) #23	ZNF572 (ENSBMSG00010019254) #24	MTSS1 (ENSBMSG00010019284) #25	NDUFB9 (ENSBMSG00010019403) #26	TATDN1 (ENSBMSG00010019440) #27	RNF139 (ENSBMSG00010019456) #28	ENSBMSG00010019472	TMEM65 (ENSBMSG00010019486) #30	FER1L6 (ENSBMSG00010019541) #31	FAM91A1 (ENSBMSG00010019645)	ANXA13 (ENSBMSG00010019706)	KLHL38 (ENSBMSG00010019782)	FBXO32 (ENSBMSG00010019814)	NTAQ1 (ENSBMSG00010019848)	ATAD2 (ENSBMSG00010019878)
Pecora	ANCESTRAL SPECIES	20	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Percora_a	ANCESTRAL SPECIES	23	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	141	KCNQ3 (ENSMMSG00000019674)	HHLA1 (ENSMMSG00000019588)	ENSMMSG00000019575	EFR3A (ENSMMSG00000019334)	ENSMMSG00000019289	ADCY8 (ENSMMSG00000019149) #13	ASAP1 (ENSMMSG00000018732) #14	CYRIB (ENSMMSG00000018610) #15	ENSMMSG00000018571 ##16	ENSMMSG00000018456 #16	MYC (ENSMMSG00000018392) ##17	ENSMMSG00000018294	ENSMMSG00000018283	TRIB1 (ENSMMSG00000018222) #20	NSMCE2 (ENSMMSG00000018145) #21	ENSMMSG00000018087 #22	SQLE (ENSMMSG00000017882) #23	ZNF572 (ENSMMSG00000017842) #24	ENSMMSG00000017794	MTSS1 (ENSMMSG00000017705) #25	NDUFB9 (ENSMMSG00000017631) #26	TATDN1 (ENSMMSG00000017369) #27	RNF139 (ENSMMSG00000017342) #28	TRMT12 (ENSMMSG00000017332) #29	TMEM65 (ENSMMSG00000017293) #30
Siberian musk deer	MODERN SPECIES	1206											LYPLAL1 (ENSMMSG00000009078)	TGFB2 (ENSMMSG00000009117)	RRP15 (ENSMMSG00000009232)	SPATA17 (ENSMMSG00000009287)	GPATCH2 (ENSMMSG00000009344)	ENSMMSG00000009450 #22	ESRRG (ENSMMSG00000009491)	USH2A (ENSMMSG00000009615)	ENSMMSG00000009953	KCTD3 (ENSMMSG00000009970)	BRINP3 (ENSMMSG00000010040)	ENSMMSG00000010082	ENSMMSG00000010094	ENSMMSG00000010107	ENSMMSG00000010124	RGS18 (ENSMMSG00000010150)	RGS21 (ENSMMSG00000010173)	RGS1 (ENSMMSG00000010209)	RGS13 (ENSMMSG00000010239)	RGS2 (ENSMMSG00000010273)	ENSMMSG00000010298
Bovidae	ANCESTRAL SPECIES	22	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000153052.c.b.a.b.l.c.a.a.b	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Bovinae	ANCESTRAL SPECIES	18	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000153052.c.b.a.b.l.c.a.a.b	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000154509.z	ENSGT00940000155285.b.b ##17	ENSGT00940000166198	ENSGT00940000160886	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a	ENSGT00390000014398
Bos	ANCESTRAL SPECIES	21	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000153052.c.b.a.b.l.c.a.a.b	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000154509.z	ENSGT00940000155285.b.b ##17	ENSGT00940000166198	ENSGT00940000160886.d	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00940000155210.a.b.y	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00960000192800	ENSGT00390000009543	ENSGT00940000159797.d	ENSGT00940000157647	ENSGT00910000146912
Bos_b	ANCESTRAL SPECIES	25	ENSGT00940000159042.a	ENSGT00390000002143.a	ENSGT00940000153052.c.b.a.b.l.c.a.a.b	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00390000018141.i.a.a.a.b.b	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000154509.z	ENSGT00940000155285.b.b ##17	ENSGT00940000166198	ENSGT00940000160886.d	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00960000192800	ENSGT00390000009543	ENSGT00940000159797.d	ENSGT00940000157647	ENSGT00910000146912	ENSGT00390000004915.a
Cow	MODERN SPECIES	5	OC90 (ENSBTAG00000007736)	EFR3A (ENSBTAG00000047834)	ENSBTAG00000003838	ADCY8 (ENSBTAG00000014600) #13	ASAP1 (ENSBTAG00000003185) #14	CYRIB (ENSBTAG00000020801) #15	ENSBTAG00000052291	GSDMC (ENSBTAG00000017478) #16	ENSBTAG00000050216	MYC (ENSBTAG00000008409) ##17	ENSBTAG00000052622	ENSBTAG00000050469	LRATD2 (ENSBTAG00000026172) #19	TRIB1 (ENSBTAG00000023179) #20	NSMCE2 (ENSBTAG00000009394) #21	WASHC5 (ENSBTAG00000010275) #22	SQLE (ENSBTAG00000005498) #23	ZNF572 (ENSBTAG00000009072) #24	MTSS1 (ENSBTAG00000020407) #25	NDUFB9 (ENSBTAG00000020405) #26	TATDN1 (ENSBTAG00000033446) #27	RNF139 (ENSBTAG00000020399) #28	TRMT12 (ENSBTAG00000020398) #29	TMEM65 (ENSBTAG00000022114) #30	FER1L6 (ENSBTAG00000013537) #31	ENSBTAG00000048373	FAM91A1 (ENSBTAG00000005025)	ANXA13 (ENSBTAG00000048822)	ANXA13 (ENSBTAG00000005585)	KLHL38 (ENSBTAG00000016754)	ENSBTAG00000049478
Hybrid Bos Indicus	MODERN SPECIES	5	ASAP1 (ENSBIXG00005005233) #14	ENSBIXG00005029009	CYRIB (ENSBIXG00005002096) #15	ENSBIXG00005005063	GSDMC (ENSBIXG00005028921) #16	ENSBIXG00005005029	MYC (ENSBIXG00005028785) ##17	ENSBIXG00005004952	ENSBIXG00005004951	ENSBIXG00005002377	ENSBIXG00005028619	ENSBIXG00005006639	LRATD2 (ENSBIXG00005028575) #19	TRIB1 (ENSBIXG00005028498) #20	NSMCE2 (ENSBIXG00005028462) #21	WASHC5 (ENSBIXG00005028371) #22	SQLE (ENSBIXG00005028246) #23	ZNF572 (ENSBIXG00005028142) #24	MTSS1 (ENSBIXG00005004825) #25	NDUFB9 (ENSBIXG00005027977) #26	TATDN1 (ENSBIXG00005027923) #27	RNF139 (ENSBIXG00005027832) #28	TRMT12 (ENSBIXG00005027811) #29	ENSBIXG00005027775	ENSBIXG00005027769	TMEM65 (ENSBIXG00005004765) #30	FER1L6 (ENSBIXG00005007781) #31	ENSBIXG00005007590	FAM91A1 (ENSBIXG00005027516)	ANXA13 (ENSBIXG00005027441)	KLHL38 (ENSBIXG00005027384)
Bos_a	ANCESTRAL SPECIES	89												ENSGT00940000160886.d	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00940000155210.a.b.y	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00960000192800	ENSGT00390000009543	ENSGT00940000159797.d	ENSGT00940000157647	ENSGT00390000004915.a
Wild yak	MODERN SPECIES	2526													LRATD2 (ENSBMUG00000026673) #19	TRIB1 (ENSBMUG00000026671) #20	NSMCE2 (ENSBMUG00000026670) #21	WASHC5 (ENSBMUG00000026669) #22	SQLE (ENSBMUG00000026668) #23	ZNF572 (ENSBMUG00000026667) #24	MTSS1 (ENSBMUG00000026665) #25	NDUFB9 (ENSBMUG00000026664) #26	ENSBMUG00000026663
Domestic yak	MODERN SPECIES	9							ENSBGRG00000009688	ENSBGRG00000009699	ENSBGRG00000009732	ENSBGRG00000009762	ENSBGRG00000010826	LRATD2 (ENSBGRG00000011091) #19	ENSBGRG00000011174	TRIB1 (ENSBGRG00000011234) #20	NSMCE2 (ENSBGRG00000011290) #21	WASHC5 (ENSBGRG00000011486) #22	SQLE (ENSBGRG00000012556) #23	ZNF572 (ENSBGRG00000012657) #24	MTSS1 (ENSBGRG00000012697) #25	NDUFB9 (ENSBGRG00000013009) #26	TATDN1 (ENSBGRG00000013174) #27	RNF139 (ENSBGRG00000013852) #28	TRMT12 (ENSBGRG00000013882) #29	ENSBGRG00000013906	TMEM65 (ENSBGRG00000013926) #30	ENSBGRG00000014030	FER1L6 (ENSBGRG00000014056) #31	FAM91A1 (ENSBGRG00000014593)	ANXA13 (ENSBGRG00000014844)	KLHL38 (ENSBGRG00000015765)	ENSBGRG00000015835
American bison	MODERN SPECIES	3036												LRATD2 (ENSBBBG00000020091) #19	ENSBBBG00000020087	TRIB1 (ENSBBBG00000020081) #20	NSMCE2 (ENSBBBG00000020078) #21	WASHC5 (ENSBBBG00000005092) #22	SQLE (ENSBBBG00000020002) #23	ZNF572 (ENSBBBG00000019973) #24	MTSS1 (ENSBBBG00000005118) #25	NDUFB9 (ENSBBBG00000005138) #26	TATDN1 (ENSBBBG00000008016) #27	RNF139 (ENSBBBG00000019732) #28	TRMT12 (ENSBBBG00000005161) #29	ENSBBBG00000019723	TMEM65 (ENSBBBG00000019716) #30	FER1L6 (ENSBBBG00000019703) #31	FAM91A1 (ENSBBBG00000005182)	ANXA13 (ENSBBBG00000019576)	KLHL38 (ENSBBBG00000019548)	ENSBBBG00000019545	FBXO32 (ENSBBBG00000019539)
Caprinae	ANCESTRAL SPECIES	18	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000153052.c.b.a.b.l.c.a.a.b	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Goat	MODERN SPECIES	5	TMEM71 (ENSCHIG00000013935)	DNAAF11 (ENSCHIG00000008846)	KCNQ3 (ENSCHIG00000022278)	HHLA1 (ENSCHIG00000009769)	OC90 (ENSCHIG00000014260)	EFR3A (ENSCHIG00000022409)	ENSCHIG00000008417	ADCY8 (ENSCHIG00000026047) #13	ASAP1 (ENSCHIG00000020558) #14	ENSCHIG00000005794 #15	ENSCHIG00000018918 #16	MYC (ENSCHIG00000013686) ##17	LRATD2 (ENSCHIG00000009416) #19	TRIB1 (ENSCHIG00000021266) #20	NSMCE2 (ENSCHIG00000027170) #21	WASHC5 (ENSCHIG00000012199) #22	SQLE (ENSCHIG00000025130) #23	ZNF572 (ENSCHIG00000013612) #24	MTSS1 (ENSCHIG00000023315) #25	NDUFB9 (ENSCHIG00000020741) #26	TATDN1 (ENSCHIG00000024616) #27	RNF139 (ENSCHIG00000021860) #28	TRMT12 (ENSCHIG00000016574) #29	TMEM65 (ENSCHIG00000010204) #30	FER1L6 (ENSCHIG00000019075) #31	FAM91A1 (ENSCHIG00000009014)	ANXA13 (ENSCHIG00000012316)	KLHL38 (ENSCHIG00000021369)	ENSCHIG00000015984	FBXO32 (ENSCHIG00000015381)	NTAQ1 (ENSCHIG00000006384)
Rambouillet Sheep	MODERN SPECIES	25	OC90 (ENSOARG00020008555)	EFR3A (ENSOARG00020008663)	ADCY8 (ENSOARG00020008946) #13	ASAP1 (ENSOARG00020009370) #14	CYRIB (ENSOARG00020009735) #15	ENSOARG00020009780	ENSOARG00020009811 #16	MYC (ENSOARG00020009900) ##17	ENSOARG00020010012	ENSOARG00020010049	ENSOARG00020010136	LRATD2 (ENSOARG00020010199) #19	ENSOARG00020010223	TRIB1 (ENSOARG00020010295) #20	NSMCE2 (ENSOARG00020010360) #21	WASHC5 (ENSOARG00020010489) #22	SQLE (ENSOARG00020011372) #23	ZNF572 (ENSOARG00020011524) #24	ENSOARG00020011568	MTSS1 (ENSOARG00020011599) #25	NDUFB9 (ENSOARG00020012046) #26	TATDN1 (ENSOARG00020012205) #27	RNF139 (ENSOARG00020012478) #28	TRMT12 (ENSOARG00020012514) #29	TMEM65 (ENSOARG00020012542) #30	FER1L6 (ENSOARG00020012678) #31	FAM91A1 (ENSOARG00020013597)	ANXA13 (ENSOARG00020014445)	KLHL38 (ENSOARG00020014756)	FBXO32 (ENSOARG00020014812)	NTAQ1 (ENSOARG00020015073)
Yarkand deer	MODERN SPECIES	13	OC90 (ENSCHYG00000024417)	EFR3A (ENSCHYG00000024549)	ADCY8 (ENSCHYG00000024999) #13	ENSCHYG00000025337	ASAP1 (ENSCHYG00000025395) #14	CYRIB (ENSCHYG00000025925) #15	ENSCHYG00000026001 ##16	ENSCHYG00000026012 #16	ENSCHYG00000026032	MYC (ENSCHYG00000026036) ##17	ENSCHYG00000026063	ENSCHYG00000026068	TRIB1 (ENSCHYG00000026086) #20	ENSCHYG00000026102	NSMCE2 (ENSCHYG00000026117) #21	WASHC5 (ENSCHYG00000026155) #22	SQLE (ENSCHYG00000026235) #23	ZNF572 (ENSCHYG00000026279) #24	MTSS1 (ENSCHYG00000026315) #25	ENSCHYG00000026380 #26	TATDN1 (ENSCHYG00000026427) #27	RNF139 (ENSCHYG00000026501) #28	TRMT12 (ENSCHYG00000026507) #29	TMEM65 (ENSCHYG00000026513) #30	FER1L6 (ENSCHYG00000026560) #31	ENSCHYG00000026703	ANXA13 (ENSCHYG00000026714)	KLHL38 (ENSCHYG00000026735)	FBXO32 (ENSCHYG00000026742)	ENSCHYG00000026773	ATAD2 (ENSCHYG00000026787)
Camelidae	ANCESTRAL SPECIES	19	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Arabian camel	MODERN SPECIES	17	PHF20L1 (ENSCDRG00005006230)	TMEM71 (ENSCDRG00005006134)	DNAAF11 (ENSCDRG00005006070)	KCNQ3 (ENSCDRG00005006010)	HHLA1 (ENSCDRG00005005943)	OC90 (ENSCDRG00005005883)	EFR3A (ENSCDRG00005005704)	ADCY8 (ENSCDRG00005005520) #13	ASAP1 (ENSCDRG00005005331) #14	CYRIB (ENSCDRG00005005243) #15	ENSCDRG00005005205 #16	MYC (ENSCDRG00005005140) ##17	LRATD2 (ENSCDRG00005005133) #19	TRIB1 (ENSCDRG00005005108) #20	NSMCE2 (ENSCDRG00005005046) #21	WASHC5 (ENSCDRG00005004903) #22	SQLE (ENSCDRG00005004790) #23	ZNF572 (ENSCDRG00005004758) #24	MTSS1 (ENSCDRG00005004660) #25	NDUFB9 (ENSCDRG00005004502) #26	TATDN1 (ENSCDRG00005004371) #27	RNF139 (ENSCDRG00005004328) #28	TRMT12 (ENSCDRG00005004316) #29	FER1L6 (ENSCDRG00005004173) #31	FAM91A1 (ENSCDRG00005004015)	ANXA13 (ENSCDRG00005003930)	KLHL38 (ENSCDRG00005003891)	FBXO32 (ENSCDRG00005003831)	NTAQ1 (ENSCDRG00005003763)	ATAD2 (ENSCDRG00005003654)	ZHX1 (ENSCDRG00005003624)
Alpaca	MODERN SPECIES	2372															NSMCE2 (ENSVPAG00000006533) #21	WASHC5 (ENSVPAG00000006531) #22	SQLE (ENSVPAG00000006530) #23	ZNF572 (ENSVPAG00000006529) #24	MTSS1 (ENSVPAG00000006527) #25	NDUFB9 (ENSVPAG00000006524) #26	TATDN1 (ENSVPAG00000006522) #27	RNF139 (ENSVPAG00000006521) #28	TRMT12 (ENSVPAG00000006519) #29
Laurasiatheria_b	ANCESTRAL SPECIES	20	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Carnivora	ANCESTRAL SPECIES	22	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Caniformia	ANCESTRAL SPECIES	23	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Caniformia_b	ANCESTRAL SPECIES	22	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809.c.a #26	ENSGT00960000188315	ENSGT00390000005809.d #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a
Ursidae	ANCESTRAL SPECIES	26	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809.d #26	ENSGT00940000156272.e #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Ursus	ANCESTRAL SPECIES	46															ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809.c.a #26	ENSGT00960000188315	ENSGT00390000005809.d #26	ENSGT00940000156272.e #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00940000172644	ENSGT00940000178693	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647
Polar bear	MODERN SPECIES	157															NSMCE2 (ENSUMAG00000022460) #21	WASHC5 (ENSUMAG00000022447) #22	SQLE (ENSUMAG00000022439) #23	ZNF572 (ENSUMAG00000022436) #24	MTSS1 (ENSUMAG00000022347) #25	ENSUMAG00000022318 #26	ENSUMAG00000022312 #27	RNF139 (ENSUMAG00000022309) #28	ENSUMAG00000022308	FER1L6 (ENSUMAG00000022268) #31	FAM91A1 (ENSUMAG00000022261)	ANXA13 (ENSUMAG00000022256)	KLHL38 (ENSUMAG00000022252)	FBXO32 (ENSUMAG00000022246)	NTAQ1 (ENSUMAG00000022240)	ATAD2 (ENSUMAG00000022014)	ZHX1 (ENSUMAG00000021988)
American black bear	MODERN SPECIES	3290																ENSUAMG00000008473 #22	SQLE (ENSUAMG00000008475) #23
Giant Panda	MODERN SPECIES	19	PHF20L1 (ENSAMEG00000012878)	TMEM71 (ENSAMEG00000012906)	DNAAF11 (ENSAMEG00000012908)	KCNQ3 (ENSAMEG00000012923)	OC90 (ENSAMEG00000012980)	EFR3A (ENSAMEG00000012999)	ADCY8 (ENSAMEG00000013039) #13	ENSAMEG00000014578 #14	CYRIB (ENSAMEG00000014669) #15	ENSAMEG00000014694 ##16	ENSAMEG00000014712 #16	MYC (ENSAMEG00000014717) ##17	LRATD2 (ENSAMEG00000000378) #19	TRIB1 (ENSAMEG00000000373) #20	NSMCE2 (ENSAMEG00000000369) #21	WASHC5 (ENSAMEG00000000329) #22	SQLE (ENSAMEG00000000303) #23	ZNF572 (ENSAMEG00000000301) #24	MTSS1 (ENSAMEG00000015819) #25	ENSAMEG00000015852 #26	TATDN1 (ENSAMEG00000015865) #27	RNF139 (ENSAMEG00000015889) #28	TRMT12 (ENSAMEG00000019612) #29	FER1L6 (ENSAMEG00000011316) #31	ENSAMEG00000026235	ANXA13 (ENSAMEG00000011197)	KLHL38 (ENSAMEG00000011186)	FBXO32 (ENSAMEG00000011145)	NTAQ1 (ENSAMEG00000011138)	ATAD2 (ENSAMEG00000011109)	ZHX1 (ENSAMEG00000018759)
Mustelinae	ANCESTRAL SPECIES	68	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000157501.l	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00390000000510.p	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809.c.a #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a.a	ENSGT00390000014398	ENSGT00550000074694.a
American mink	MODERN SPECIES	248												LRATD2 (ENSNVIG00000001351) #19	ENSNVIG00000001359	TRIB1 (ENSNVIG00000001370) #20	NSE2 (ENSNVIG00000001384) #21	WASHC5 (ENSNVIG00000001448) #22	ERG1 (ENSNVIG00000001505) #23	ZNF572 (ENSNVIG00000001533) #24	MTSS1 (ENSNVIG00000001544) #25	NDUFB9 (ENSNVIG00000001696) #26	TATDN1 (ENSNVIG00000001737) #27	RNF139 (ENSNVIG00000001824) #28	TRMT12 (ENSNVIG00000001830) #29	TMEM65 (ENSNVIG00000001834) #30	FER1L6 (ENSNVIG00000001848) #31	F91A1 (ENSNVIG00000001917)	ANXA13 (ENSNVIG00000002070)	KLHL38 (ENSNVIG00000002107)	ENSNVIG00000002111
Ferret	MODERN SPECIES	172	EFR3A (ENSMPUG00000001401)	ADCY8 (ENSMPUG00000001395) #13	ENSMPUG00000019169	ASAP1 (ENSMPUG00000001385) #14	CYRIB (ENSMPUG00000001375) #15	ENSMPUG00000001335	ENSMPUG00000001332 #16	ENSMPUG00000001329	ENSMPUG00000019165	ENSMPUG00000001328	MYC (ENSMPUG00000001327) ##17	LRATD2 (ENSMPUG00000001326) #19	ENSMPUG00000019155	TRIB1 (ENSMPUG00000001325) #20	NSMCE2 (ENSMPUG00000001324) #21	WASHC5 (ENSMPUG00000001320) #22	SQLE (ENSMPUG00000001318) #23	ZNF572 (ENSMPUG00000001315) #24	MTSS1 (ENSMPUG00000001312) #25	NDUFB9 (ENSMPUG00000001303) #26	TATDN1 (ENSMPUG00000001278) #27	RNF139 (ENSMPUG00000001276) #28	TRMT12 (ENSMPUG00000019150) #29	TMEM65 (ENSMPUG00000001274) #30	FER1L6 (ENSMPUG00000001190) #31	FAM91A1 (ENSMPUG00000001188)	ANXA13 (ENSMPUG00000001184)	KLHL38 (ENSMPUG00000001179)	ENSMPUG00000018558	FBXO32 (ENSMPUG00000001173)	NTAQ1 (ENSMPUG00000001150)
Canidae	ANCESTRAL SPECIES	33	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Canis_lupus	ANCESTRAL SPECIES	19	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000153525.h.d.b.b	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Dog	MODERN SPECIES	4	LRRC6 (ENSCAFG00845007949)	KCNQ3 (ENSCAFG00845007700)	HHLA1 (ENSCAFG00845007582)	EFR3A (ENSCAFG00845007232)	LDHB (ENSCAFG00845007136)	ENSCAFG00845014002	ADCY8 (ENSCAFG00845013615) #13	ASAP1 (ENSCAFG00845013030) #14	FAM49B (ENSCAFG00845012798) #15	ENSCAFG00845012688 #16	MYC (ENSCAFG00845012475) ##17	LRATD2 (ENSCAFG00845012412) #19	ENSCAFG00845012377	TRIB1 (ENSCAFG00845012294) #20	NSMCE2 (ENSCAFG00845012233) #21	WASHC5 (ENSCAFG00845012127) #22	SQLE (ENSCAFG00845012036) #23	ZNF572 (ENSCAFG00845011976) #24	RPL21 (ENSCAFG00845011960)	MTSS1 (ENSCAFG00845011807) #25	NDUFB9 (ENSCAFG00845011733) #26	TATDN1 (ENSCAFG00845011530) #27	RNF139 (ENSCAFG00845011445) #28	FER1L6 (ENSCAFG00845010656) #31	FAM91A1 (ENSCAFG00845010407)	ANXA13 (ENSCAFG00845010107)	KLHL38 (ENSCAFG00845010026)	FBXO32 (ENSCAFG00845009971)	NTAQ1 (ENSCAFG00845009837)	ATAD2 (ENSCAFG00845009576)	ZHX1 (ENSCAFG00845009521)
Dingo	MODERN SPECIES	88	DNAAF11 (ENSCAFG00020013419)	KCNQ3 (ENSCAFG00020013410)	OC90 (ENSCAFG00020013405)	EFR3A (ENSCAFG00020012885)	ENSCAFG00020012848	ADCY8 (ENSCAFG00020012822) #13	ASAP1 (ENSCAFG00020006911) #14	ENSCAFG00020006697	CYRIB (ENSCAFG00020006688) #15	GSDMC (ENSCAFG00020006656) #16	ENSCAFG00020006654	MYC (ENSCAFG00020006613) ##17	LRATD2 (ENSCAFG00020006594) #19	TRIB1 (ENSCAFG00020006573) #20	NSMCE2 (ENSCAFG00020006569) #21	WASHC5 (ENSCAFG00020006561) #22	SQLE (ENSCAFG00020006554) #23	ZNF572 (ENSCAFG00020006553) #24	MTSS1 (ENSCAFG00020006532) #25	NDUFB9 (ENSCAFG00020006525) #26	TATDN1 (ENSCAFG00020006510) #27	RNF139 (ENSCAFG00020006506) #28	TRMT12 (ENSCAFG00020006500) #29	FER1L6 (ENSCAFG00020006418) #31	FAM91A1 (ENSCAFG00020006361)	ANXA13 (ENSCAFG00020006341)	KLHL38 (ENSCAFG00020006338)	FBXO32 (ENSCAFG00020006334)	NTAQ1 (ENSCAFG00020006326)	ATAD2 (ENSCAFG00020006012)	ZHX1 (ENSCAFG00020006010)
Red fox	MODERN SPECIES	13	LRRC6 (ENSVVUG00000017284)	KCNQ3 (ENSVVUG00000017113)	OC90 (ENSVVUG00000017091)	EFR3A (ENSVVUG00000017057)	ADCY8 (ENSVVUG00000017031) #13	ASAP1 (ENSVVUG00000017001) #14	FAM49B (ENSVVUG00000016971) #15	ENSVVUG00000016962 #16	ENSVVUG00000016959	ENSVVUG00000016955	ENSVVUG00000016935	MYC (ENSVVUG00000016922) ##17	FAM84B (ENSVVUG00000016910) #19	ENSVVUG00000016885 #20	NSMCE2 (ENSVVUG00000016878) #21	WASHC5 (ENSVVUG00000016865) #22	SQLE (ENSVVUG00000016857) #23	ZNF572 (ENSVVUG00000016853) #24	MTSS1 (ENSVVUG00000016820) #25	NDUFB9 (ENSVVUG00000016810) #26	TATDN1 (ENSVVUG00000016797) #27	RNF139 (ENSVVUG00000016792) #28	TRMT12 (ENSVVUG00000016790) #29	FER1L6 (ENSVVUG00000016409) #31	FAM91A1 (ENSVVUG00000016295)	ANXA13 (ENSVVUG00000016285)	KLHL38 (ENSVVUG00000016276)	FBXO32 (ENSVVUG00000016269)	WDYHV1 (ENSVVUG00000016251)	ATAD2 (ENSVVUG00000016233)	CUNH8orf76 (ENSVVUG00000016224)
Felidae	ANCESTRAL SPECIES	22	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Panthera	ANCESTRAL SPECIES	16	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Tiger	MODERN SPECIES	89												ENSPTIG00000013566	LRATD2 (ENSPTIG00000005990) #19	TRIB1 (ENSPTIG00000012598) #20	NSMCE2 (ENSPTIG00000010399) #21	WASHC5 (ENSPTIG00000005786) #22	SQLE (ENSPTIG00000021719) #23	ZNF572 (ENSPTIG00000021638) #24	MTSS1 (ENSPTIG00000020318) #25	NDUFB9 (ENSPTIG00000020209) #26	TATDN1 (ENSPTIG00000017884) #27	RNF139 (ENSPTIG00000017048) #28	TMEM65 (ENSPTIG00000016011) #30	FER1L6 (ENSPTIG00000014184) #31	FAM91A1 (ENSPTIG00000010710)	ANXA13 (ENSPTIG00000009642)	KLHL38 (ENSPTIG00000008147)	FBXO32 (ENSPTIG00000006705)	NTAQ1 (ENSPTIG00000004963)	ATAD2 (ENSPTIG00000020684)	ZHX1 (ENSPTIG00000005572)
Panthera_a	ANCESTRAL SPECIES	16	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
leopard	MODERN SPECIES	34	DNAAF11 (ENSPPRG00000000373)	KCNQ3 (ENSPPRG00000000125)	HHLA1 (ENSPPRG00000022713)	OC90 (ENSPPRG00000022875)	EFR3A (ENSPPRG00000022909)	ADCY8 (ENSPPRG00000023138) #13	ASAP1 (ENSPPRG00000023384) #14	CYRIB (ENSPPRG00000023477) #15	GSDMC (ENSPPRG00000023614) #16	ENSPPRG00000023635	MYC (ENSPPRG00000023691) ##17	ENSPPRG00000023723 #19	ENSPPRG00000019550 #19	TRIB1 (ENSPPRG00000023747) #20	NSMCE2 (ENSPPRG00000023841) #21	WASHC5 (ENSPPRG00000023877) #22	SQLE (ENSPPRG00000023972) #23	ZNF572 (ENSPPRG00000024012) #24	MTSS1 (ENSPPRG00000024076) #25	NDUFB9 (ENSPPRG00000024328) #26	TATDN1 (ENSPPRG00000024355) #27	RNF139 (ENSPPRG00000024376) #28	TMEM65 (ENSPPRG00000024390) #30	FER1L6 (ENSPPRG00000024418) #31	FAM91A1 (ENSPPRG00000024483)	ANXA13 (ENSPPRG00000024516)	KLHL38 (ENSPPRG00000024544)	FBXO32 (ENSPPRG00000024567)	NTAQ1 (ENSPPRG00000024575)	ATAD2 (ENSPPRG00000024647)	ENSPPRG00000024654
lion	MODERN SPECIES	509	TMEM71 (ENSPLOG00000002241)	DNAAF11 (ENSPLOG00000002285)	KCNQ3 (ENSPLOG00000002347)	HHLA1 (ENSPLOG00000002401)	OC90 (ENSPLOG00000002428)	EFR3A (ENSPLOG00000002475)	ADCY8 (ENSPLOG00000002567) #13	ASAP1 (ENSPLOG00000002668) #14	CYRIB (ENSPLOG00000002794) #15	GSDMC (ENSPLOG00000002840) #16	ENSPLOG00000002858	MYC (ENSPLOG00000002875) ##17	LRATD2 (ENSPLOG00000002930) #19	TRIB1 (ENSPLOG00000002944) #20	NSMCE2 (ENSPLOG00000002962) #21	WASHC5 (ENSPLOG00000003010) #22	SQLE (ENSPLOG00000003057) #23	ZNF572 (ENSPLOG00000003078) #24	MTSS1 (ENSPLOG00000003106) #25	NDUFB9 (ENSPLOG00000003169) #26	TATDN1 (ENSPLOG00000003218) #27	RNF139 (ENSPLOG00000003288) #28	TRMT12 (ENSPLOG00000003293) #29	TMEM65 (ENSPLOG00000004606) #30	FER1L6 (ENSPLOG00000004636) #31	FAM91A1 (ENSPLOG00000004668)	ANXA13 (ENSPLOG00000004691)	KLHL38 (ENSPLOG00000004709)	FBXO32 (ENSPLOG00000004720)	NTAQ1 (ENSPLOG00000004742)	ATAD2 (ENSPLOG00000004768)
Cat	MODERN SPECIES	249	PHF20L1 (ENSFCAG00000000706)	TMEM71 (ENSFCAG00000040314)	DNAAF11 (ENSFCAG00000008520)	KCNQ3 (ENSFCAG00000000984)	HHLA1 (ENSFCAG00000024254)	OC90 (ENSFCAG00000000982)	EFR3A (ENSFCAG00000029928)	ADCY8 (ENSFCAG00000006436) #13	ASAP1 (ENSFCAG00000006435) #14	CYRIB (ENSFCAG00000015625) #15	GSDMC (ENSFCAG00000006972) #16	MYC (ENSFCAG00000041539) ##17	LRATD2 (ENSFCAG00000035569) #19	TRIB1 (ENSFCAG00000004685) #20	NSMCE2 (ENSFCAG00000004684) #21	WASHC5 (ENSFCAG00000004683) #22	SQLE (ENSFCAG00000031123) #23	ZNF572 (ENSFCAG00000024394) #24	MTSS1 (ENSFCAG00000004679) #25	NDUFB9 (ENSFCAG00000036360) #26	TATDN1 (ENSFCAG00000034753) #27	RNF139 (ENSFCAG00000031765) #28	TMEM65 (ENSFCAG00000045729) #30	FER1L6 (ENSFCAG00000018500) #31	FAM91A1 (ENSFCAG00000010472)	ANXA13 (ENSFCAG00000010470)	KLHL38 (ENSFCAG00000010469)	FBXO32 (ENSFCAG00000010467)	NTAQ1 (ENSFCAG00000030125)	ATAD2 (ENSFCAG00000029097)	ZHX1 (ENSFCAG00000013745)
Laurasiatheria_c	ANCESTRAL SPECIES	19	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Equus	ANCESTRAL SPECIES	14	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b.b ##17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Donkey	MODERN SPECIES	3	KCNQ3 (ENSEASG00005022131)	HHLA1 (ENSEASG00005022159)	OC90 (ENSEASG00005036426)	EFR3A (ENSEASG00005022218)	ADCY8 (ENSEASG00005022264) #13	ASAP1 (ENSEASG00005022277) #14	CYRIB (ENSEASG00005022304) #15	ENSEASG00005038161 ##16	ENSEASG00005022323 #16	MYC (ENSEASG00005029845) ##17	LRATD2 (ENSEASG00005022361) #19	ENSEASG00005032722	ENSEASG00005022366	TRIB1 (ENSEASG00005035610) #20	NSMCE2 (ENSEASG00005022375) #21	WASHC5 (ENSEASG00005022380) #22	SQLE (ENSEASG00005022392) #23	ZNF572 (ENSEASG00005022396) #24	MTSS1 (ENSEASG00005022408) #25	NDUFB9 (ENSEASG00005026137) #26	TATDN1 (ENSEASG00005022428) #27	RNF139 (ENSEASG00005022440) #28	TMEM65 (ENSEASG00005031098) #30	FER1L6 (ENSEASG00005022452) #31	FAM91A1 (ENSEASG00005022462)	ANXA13 (ENSEASG00005022465)	KLHL38 (ENSEASG00005022468)	FBXO32 (ENSEASG00005022474)	NTAQ1 (ENSEASG00005022476)	ATAD2 (ENSEASG00005022524)	ZHX1 (ENSEASG00005022590)
Horse	MODERN SPECIES	30	ADCY8 (ENSECAG00000024601) #13	ASAP1 (ENSECAG00000016246) #14	CYRIB (ENSECAG00000023517) #15	ENSECAG00000023276 ##16	ENSECAG00000053909 #16	ENSECAG00000046146 #16	ENSECAG00000022588 #16	MYC (ENSECAG00000022059) ##17	ENSECAG00000059508	LRATD2 (ENSECAG00000021976) #19	ENSECAG00000002402	TRIB1 (ENSECAG00000019660) #20	NSMCE2 (ENSECAG00000026944) #21	SQLE (ENSECAG00000013998) #23	ZNF572 (ENSECAG00000012206) #24	WASHC5 (ENSECAG00000024402) #22	MTSS1 (ENSECAG00000021545) #25	NDUFB9 (ENSECAG00000018238) #26	TATDN1 (ENSECAG00000011179) #27	RNF139 (ENSECAG00000008926) #28	TMEM65 (ENSECAG00000033363) #30	FER1L6 (ENSECAG00000019298) #31	FAM91A1 (ENSECAG00000011491)	ANXA13 (ENSECAG00000021361)	KLHL38 (ENSECAG00000021284)	FBXO32 (ENSECAG00000016002)	NTAQ1 (ENSECAG00000011250)	ATAD2 (ENSECAG00000023808)	ZHX1 (ENSECAG00000023451)	C8orf76 (ENSECAG00000020843)	FAM83A (ENSECAG00000018998)
Chiroptera	ANCESTRAL SPECIES	27	ENSGT00940000159104	ENSGT00940000159300.i	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.b ##17	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Megabat	MODERN SPECIES	2615														TRIB1 (ENSPVAG00000005905) #20	NSMCE2 (ENSPVAG00000005904) #21	WASHC5 (ENSPVAG00000005902) #22	SQLE (ENSPVAG00000005900) #23	ZNF572 (ENSPVAG00000005897) #24
Microchiroptera	ANCESTRAL SPECIES	27	ENSGT00940000159104	ENSGT00940000159300.i	ENSGT00940000156215.f	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b.b ##17	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Microbat	MODERN SPECIES	964	ZC2HC1A (ENSMLUG00000002353)	PKIA (ENSMLUG00000026688)	ENSMLUG00000002485	PRKDC (ENSMLUG00000000718)	ENSMLUG00000028414	MCM4 (ENSMLUG00000004327)	ENSMLUG00000029773	ENSMLUG00000030428	ENSMLUG00000002057	ENSMLUG00000029259	ENSMLUG00000006521	CLXN (ENSMLUG00000007204)	SNAI2 (ENSMLUG00000001086)	TRIB1 (ENSMLUG00000013820) #20	NSMCE2 (ENSMLUG00000000640) #21	WASHC5 (ENSMLUG00000000620) #22	SQLE (ENSMLUG00000000613) #23	ZNF572 (ENSMLUG00000000608) #24	MTSS1 (ENSMLUG00000003769) #25	NDUFB9 (ENSMLUG00000003765) #26	TATDN1 (ENSMLUG00000003759) #27	RNF139 (ENSMLUG00000026526) #28	TRMT12 (ENSMLUG00000003753) #29	TMEM65 (ENSMLUG00000003750) #30	FER1L6 (ENSMLUG00000006536) #31	FAM91A1 (ENSMLUG00000001436)	ANXA13 (ENSMLUG00000001429)	KLHL38 (ENSMLUG00000017639)	FBXO32 (ENSMLUG00000013223)	NTAQ1 (ENSMLUG00000013217)	ENSMLUG00000015236
Greater horseshoe bat	MODERN SPECIES	5	TG (ENSRFEG00010018495)	PHF20L1 (ENSRFEG00010018338)	TMEM71 (ENSRFEG00010018297)	DNAAF11 (ENSRFEG00010018239)	KCNQ3 (ENSRFEG00010018096)	HHLA1 (ENSRFEG00010017925)	OC90 (ENSRFEG00010017787)	EFR3A (ENSRFEG00010017399)	ENSRFEG00010017331	ADCY8 (ENSRFEG00010016768) #13	ASAP1 (ENSRFEG00010016291) #14	CYRIB (ENSRFEG00010016153) #15	MYC (ENSRFEG00010016044) ##17	TRIB1 (ENSRFEG00010015874) #20	NSMCE2 (ENSRFEG00010015710) #21	WASHC5 (ENSRFEG00010015635) #22	SQLE (ENSRFEG00010015259) #23	ZNF572 (ENSRFEG00010015204) #24	MTSS1 (ENSRFEG00010014989) #25	NDUFB9 (ENSRFEG00010014891) #26	TATDN1 (ENSRFEG00010014584) #27	RNF139 (ENSRFEG00010014527) #28	ENSRFEG00010014471	TMEM65 (ENSRFEG00010014392) #30	FER1L6 (ENSRFEG00010013777) #31	FAM91A1 (ENSRFEG00010013710)	ANXA13 (ENSRFEG00010013564)	KLHL38 (ENSRFEG00010013487)	FBXO32 (ENSRFEG00010013335)	NTAQ1 (ENSRFEG00010013190)	ATAD2 (ENSRFEG00010013122)
Eulipotyphla	ANCESTRAL SPECIES	554															ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23
Hedgehog	MODERN SPECIES	802																WASHC5 (ENSEEUG00000001405) #22	ENSEEUG00000001398 #23
Common shrew	MODERN SPECIES	4576															NSMCE2 (ENSSARG00000008719) #21	WASHC5 (ENSSARG00000008673) #22
Atlantogenata	ANCESTRAL SPECIES	20												ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a
Xenarthra	ANCESTRAL SPECIES	962														ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24
Armadillo	MODERN SPECIES	965														TRIB1 (ENSDNOG00000043518) #20	NSMCE2 (ENSDNOG00000014260) #21	WASHC5 (ENSDNOG00000008359) #22	SQLE (ENSDNOG00000038454) #23	ZNF572 (ENSDNOG00000009854) #24
Sloth	MODERN SPECIES	616																WASHC5 (ENSCHOG00000006878) #22	SQLE (ENSCHOG00000006858) #23
Afrotheria	ANCESTRAL SPECIES	10	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Afrotheria_a	ANCESTRAL SPECIES	10	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.a ##16	ENSGT00950000183140.a.a.m.a.a.b #16	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000153304.A #29	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Elephant	MODERN SPECIES	567	TMEM71 (ENSLAFG00000009515)	DNAAF11 (ENSLAFG00000004600)	KCNQ3 (ENSLAFG00000005689)	HHLA1 (ENSLAFG00000027750)	OC90 (ENSLAFG00000005087)	EFR3A (ENSLAFG00000017622)	ADCY8 (ENSLAFG00000009118) #13	ASAP1 (ENSLAFG00000001748) #14	ENSLAFG00000001205 #15	ENSLAFG00000008615 ##16	ENSLAFG00000009620 #16	MYC (ENSLAFG00000001410) #17	LRATD2 (ENSLAFG00000007398) #19	TRIB1 (ENSLAFG00000012712) #20	NSMCE2 (ENSLAFG00000014786) #21	WASHC5 (ENSLAFG00000003762) #22	SQLE (ENSLAFG00000003760) #23	MTSS1 (ENSLAFG00000012227) #25	NDUFB9 (ENSLAFG00000012224) #26	TATDN1 (ENSLAFG00000012220) #27	RNF139 (ENSLAFG00000030934) #28	TRMT12 (ENSLAFG00000012519) #29	FER1L6 (ENSLAFG00000016920) #31	FAM91A1 (ENSLAFG00000008368)	ANXA13 (ENSLAFG00000008362)	KLHL38 (ENSLAFG00000003345)	FBXO32 (ENSLAFG00000003343)	NTAQ1 (ENSLAFG00000011793)	ENSLAFG00000000938	ZHX1 (ENSLAFG00000005884)	C8orf76 (ENSLAFG00000005882)
Hyrax	MODERN SPECIES	559																WASHC5 (ENSPCAG00000013746) #22	SQLE (ENSPCAG00000013678) #23
Tenrec	MODERN SPECIES	4910																WASHC5 (ENSETEG00000002145) #22	SQLE (ENSETEG00000002142) #23
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b.p #16	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183140.a.a.m.a.a.b.p #16	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Diprotodontia	ANCESTRAL SPECIES	36	ENSGT00940000159300	ENSGT00940000159104	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Diprotodontia_a	ANCESTRAL SPECIES	35	ENSGT00940000159300	ENSGT00940000159104	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00940000162935 #24	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1146								ENSVURG00010013737 #13	ENSVURG00010013690 #14	ENSVURG00010013616 #15	ENSVURG00010013593	ENSVURG00010013579 #17	ENSVURG00010013568 #19	ENSVURG00010013557 #20	ENSVURG00010013553 #21	ENSVURG00010013531 #22	ENSVURG00010013502 #23	ENSVURG00010013490 #24	ENSVURG00010013474 #25	ENSVURG00010013458 #26	ENSVURG00010013451 #27	ENSVURG00010013447 #28	ENSVURG00010013443 #30	ENSVURG00010013369 #31	ST3GAL1 (ENSVURG00010013340)	NDRG1 (ENSVURG00010013298)	CCN4 (ENSVURG00010013284)	SLA (ENSVURG00010013277)	TG (ENSVURG00010012634)	PHF20L1 (ENSVURG00010012542)	ENSVURG00010012513
Common wonbat	MODERN SPECIES	1146	TG (ENSVURG00010012634)	PHF20L1 (ENSVURG00010012542)	ENSVURG00010012513	DNAAF11 (ENSVURG00010012481)	KCNQ3 (ENSVURG00010012446)	EFR3A (ENSVURG00010012423)	ENSVURG00010011799 #13	ENSVURG00010011721 #14	ENSVURG00010011692 #15	ENSVURG00010011678	ENSVURG00010011669 #17	ENSVURG00010011661 #19	ENSVURG00010011648 #20	ENSVURG00010011643	ENSVURG00010011632 #21	ENSVURG00010011606 #22	ENSVURG00010011581 #23	ENSVURG00010011575 #24	ENSVURG00010011562 #25	ENSVURG00010011549 #26	ENSVURG00010011488 #27	ENSVURG00010011477 #28	ENSVURG00010011467 #30	ENSVURG00010011328 #31
koala	MODERN SPECIES	156												ENSPCIG00000011092	TRIB1 (ENSPCIG00000032567) #20	ENSPCIG00000011281	ENSPCIG00000011284	WASHC5 (ENSPCIG00000011291) #22	SQLE (ENSPCIG00000008224) #23	ZNF572 (ENSPCIG00000020795) #24	MTSS1 (ENSPCIG00000025026) #25	NDUFB9 (ENSPCIG00000025024) #26	TATDN1 (ENSPCIG00000025022) #27	RNF139 (ENSPCIG00000025020) #28	TMEM65 (ENSPCIG00000025017) #30	FER1L6 (ENSPCIG00000018183) #31	FAM91A1 (ENSPCIG00000014043)	ANXA13 (ENSPCIG00000014033)	KLHL38 (ENSPCIG00000014021)	FBXO32 (ENSPCIG00000014014)	NTAQ1 (ENSPCIG00000014010)	ATAD2 (ENSPCIG00000013943)	ZHX1 (ENSPCIG00000013933)
Wallaby	MODERN SPECIES	7121																ENSMEUG00000013613 #22
Tasmanian devil	MODERN SPECIES		PHF20L1 (ENSSHAG00000012913)	TMEM71 (ENSSHAG00000027863)	DNAAF11 (ENSSHAG00000011831)	KCNQ3 (ENSSHAG00000007553)	ENSSHAG00000006599	ENSSHAG00000005694	EFR3A (ENSSHAG00000003517)	ADCY8 (ENSSHAG00000017165) #13	ENSSHAG00000014207 #14	CYRIB (ENSSHAG00000013224) #15	ENSSHAG00000024891 #16	MYC (ENSSHAG00000029812) #17	LRATD2 (ENSSHAG00000030244) #19	TRIB1 (ENSSHAG00000006782) #20	NSMCE2 (ENSSHAG00000027589) #21	WASHC5 (ENSSHAG00000006205) #22	SQLE (ENSSHAG00000027137) #23	ZNF572 (ENSSHAG00000005229) #24	MTSS1 (ENSSHAG00000031768) #25	NDUFB9 (ENSSHAG00000026400) #26	ENSSHAG00000007003 #27	RNF139 (ENSSHAG00000006820) #28	ENSSHAG00000027072	TMEM65 (ENSSHAG00000029529) #30	FER1L6 (ENSSHAG00000005543) #31	FAM91A1 (ENSSHAG00000015463)	ANXA13 (ENSSHAG00000015060)	KLHL38 (ENSSHAG00000014912)	FBXO32 (ENSSHAG00000014341)	NTAQ1 (ENSSHAG00000022443)	ATAD2 (ENSSHAG00000013547)
Opossum	MODERN SPECIES	2	ENSMODG00000029213	ENSMODG00000044456	ASAP1 (ENSMODG00000001522) #14	CYRIB (ENSMODG00000001594) #15	ENSMODG00000001632 #16	ENSMODG00000001689 #16	ENSMODG00000001653 #16	ENSMODG00000040938	MYC (ENSMODG00000001735) #17	LRATD2 (ENSMODG00000024442) #19	ENSMODG00000039491	TRIB1 (ENSMODG00000001741) #20	ENSMODG00000047243	ENSMODG00000051380	NSMCE2 (ENSMODG00000027668) #21	WASHC5 (ENSMODG00000001800) #22	SQLE (ENSMODG00000001811) #23	ZNF572 (ENSMODG00000001814) #24	MTSS1 (ENSMODG00000001828) #25	NDUFB9 (ENSMODG00000049785) #26	TATDN1 (ENSMODG00000001840) #27	RNF139 (ENSMODG00000001847) #28	ENSMODG00000042266	ENSMODG00000001863	TMEM65 (ENSMODG00000001868) #30	FER1L6 (ENSMODG00000001897) #31	FAM91A1 (ENSMODG00000001919)	ENSMODG00000040302	ANXA13 (ENSMODG00000001929)	KLHL38 (ENSMODG00000001944)	FBXO32 (ENSMODG00000001972)
Platypus	MODERN SPECIES	15	ENSOANG00000010064	ENSOANG00000036376	ENSOANG00000039518	ENSOANG00000030173	DNAAF11 (ENSOANG00000008099)	KCNQ3 (ENSOANG00000008100)	ENSOANG00000008101	EFR3A (ENSOANG00000008102)	ADCY8 (ENSOANG00000008103) #13	ASAP1 (ENSOANG00000008104) #14	CYRIB (ENSOANG00000008106) #15	MYC (ENSOANG00000008107) #17	LRATD2 (ENSOANG00000049595) #19	TRIB1 (ENSOANG00000008111) #20	NSMCE2 (ENSOANG00000020245) #21	WASHC5 (ENSOANG00000014093) #22	SQLE (ENSOANG00000014091) #23	MTSS1 (ENSOANG00000014090) #25	NDUFB9 (ENSOANG00000014089) #26	RNF139 (ENSOANG00000014087) #28	TATDN1 (ENSOANG00000014088) #27	FER1L6 (ENSOANG00000014086) #31	FAM91A1 (ENSOANG00000014085)	ANXA13 (ENSOANG00000014084)	KLHL38 (ENSOANG00000014083)	ENSOANG00000012778	ENSOANG00000043307	ATAD2 (ENSOANG00000014081)	ENSOANG00000020239	ADGRB1 (ENSOANG00000014079)	ENSOANG00000014078
Sauria	ANCESTRAL SPECIES		ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00940000165526	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Lepidosauria	ANCESTRAL SPECIES	2	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00940000165526	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Episquamata	ANCESTRAL SPECIES	1	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00940000156265.x.b.a.b	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00390000002417	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Toxicofera	ANCESTRAL SPECIES	8	ENSGT00940000154435.y.a.b	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00940000156265.x.b.a.b	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00390000002417	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Elapidae	ANCESTRAL SPECIES	8	ENSGT00940000159300	ENSGT00940000159104	ENSGT00940000156215	ENSGT00940000154435.y.a.b	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00390000002417	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435	ENSGT00940000153859.b
Elapidae_a	ANCESTRAL SPECIES	44	ENSGT00940000159104	ENSGT00940000156215	ENSGT00940000154435.y.a.b.c	ENSGT00940000154435.y.a.b.d	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00940000164859	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00390000002417	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435	ENSGT00940000153859.b
Acanthophiinae	ANCESTRAL SPECIES	15	ENSGT00940000156215	ENSGT00940000154435.y.a.b.c	ENSGT00940000154435.y.a.b.d	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00950000183010.a.b.a.a.a.a.b	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00940000164859	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00390000002417	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435	ENSGT00940000153859.b
Eastern brown snake	MODERN SPECIES	22	ENSPTXG00000005957	ENSPTXG00000005955	PHF20L1 (ENSPTXG00000005953)	ENSPTXG00000005951	DNAAF11 (ENSPTXG00000005948)	KCNQ3 (ENSPTXG00000005946)	HHLA1 (ENSPTXG00000005945)	ADCY8 (ENSPTXG00000005944) #13	ASAP1 (ENSPTXG00000004742) #14	CYRIB (ENSPTXG00000004740) #15	ENSPTXG00000004739	MYC (ENSPTXG00000004738) #17	LRATD2 (ENSPTXG00000004737) #19	TRIB1 (ENSPTXG00000004735) #20	ENSPTXG00000004733	WASHC5 (ENSPTXG00000004731) #22	SQLE (ENSPTXG00000004729) #23	BBS10 (ENSPTXG00000004725)	MTSS1 (ENSPTXG00000004724) #25	NDUFB9 (ENSPTXG00000004723) #26	TATDN1 (ENSPTXG00000004722) #27	RNF139 (ENSPTXG00000004721) #28	FER1L6 (ENSPTXG00000004720) #31	FAM91A1 (ENSPTXG00000004172)	KLHL38 (ENSPTXG00000004171)	FBXO32 (ENSPTXG00000004169)	NTAQ1 (ENSPTXG00000004168)	ATAD2 (ENSPTXG00000004165)	ZHX1 (ENSPTXG00000004164)	C8orf76 (ENSPTXG00000004163)	TBC1D31 (ENSPTXG00000004153)
Mainland tiger snake	MODERN SPECIES	111										ENSNSUG00000005494	MYC (ENSNSUG00000005493) #17	ENSNSUG00000005491	ENSNSUG00000005489	TRIB1 (ENSNSUG00000005488) #20	ENSNSUG00000005487	WASHC5 (ENSNSUG00000003752) #22	SQLE (ENSNSUG00000003716) #23	BBS10 (ENSNSUG00000003708)	MTSS1 (ENSNSUG00000003187) #25	NDUFB9 (ENSNSUG00000003184) #26	TATDN1 (ENSNSUG00000003174) #27	RNF139 (ENSNSUG00000003171) #28	ENSNSUG00000003168	FER1L6 (ENSNSUG00000003164) #31	FAM91A1 (ENSNSUG00000001952)	KLHL38 (ENSNSUG00000001942)	FBXO32 (ENSNSUG00000001935)	NTAQ1 (ENSNSUG00000001934)	ATAD2 (ENSNSUG00000001932)	ZHX1 (ENSNSUG00000001930)	C8orf76 (ENSNSUG00000001928)
Blue-lipped sea krait	MODERN SPECIES	3384																WASHC5 (ENSLLTG00000008323) #22	SQLE (ENSLLTG00000008286) #23
Indian cobra	MODERN SPECIES	2	ENSNNAG00000018246	SLA (ENSNNAG00000018242)	PHF20L1 (ENSNNAG00000018233)	ENSNNAG00000018226	ENSNNAG00000018224	DNAAF11 (ENSNNAG00000018223)	KCNQ3 (ENSNNAG00000018219)	HHLA1 (ENSNNAG00000018215)	ADCY8 (ENSNNAG00000018206) #13	CYRIB (ENSNNAG00000017884) #15	MYC (ENSNNAG00000017883) #17	ENSNNAG00000017881	ENSNNAG00000017875	TRIB1 (ENSNNAG00000017873) #20	NSMCE2 (ENSNNAG00000017871) #21	WASHC5 (ENSNNAG00000017869) #22	SQLE (ENSNNAG00000017866) #23	BBS10 (ENSNNAG00000017864)	MTSS1 (ENSNNAG00000017860) #25	NDUFB9 (ENSNNAG00000017857) #26	TATDN1 (ENSNNAG00000017848) #27	RNF139 (ENSNNAG00000017846) #28	ENSNNAG00000017834 #31	FAM91A1 (ENSNNAG00000017828)	KLHL38 (ENSNNAG00000017824)	FBXO32 (ENSNNAG00000017804)	NTAQ1 (ENSNNAG00000017796)	ATAD2 (ENSNNAG00000017787)	ZHX1 (ENSNNAG00000017785)	C8orf76 (ENSNNAG00000017784)	TBC1D31 (ENSNNAG00000017755)
Lizard	MODERN SPECIES	3	ENSACAG00000035189	ENSACAG00000036051	ZFAT (ENSACAG00000011949)	ENSACAG00000039240	ENSACAG00000037101	KHDRBS3 (ENSACAG00000012042)	ADCY8 (ENSACAG00000010598) #13	ASAP1 (ENSACAG00000010415) #14	ENSACAG00000034658	CYRIB (ENSACAG00000010376) #15	MYC (ENSACAG00000010372) #17	LRATD2 (ENSACAG00000010363) #19	ENSACAG00000010355	TRIB1 (ENSACAG00000010344) #20	NSMCE2 (ENSACAG00000010328) #21	WASHC5 (ENSACAG00000010210) #22	SQLE (ENSACAG00000010117) #23	ENSACAG00000010107	MTSS1 (ENSACAG00000010026) #25	ENSACAG00000010022 #26	TATDN1 (ENSACAG00000009985) #27	RNF139 (ENSACAG00000009979) #28	TMEM65 (ENSACAG00000009965) #30	FER1L6 (ENSACAG00000009955) #31	ENSACAG00000029248	ENSACAG00000009912	ENSACAG00000009751	KLHL38 (ENSACAG00000009737)	FBXO32 (ENSACAG00000009711)	ENSACAG00000039604	NTAQ1 (ENSACAG00000009686)
Laterata	ANCESTRAL SPECIES	5	ENSGT00390000011144	ENSGT00940000154435.y.a.b	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00940000156265.x.b.a.b	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00390000002417	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Argentine black and white tegu	MODERN SPECIES	13	ENSSMRG00000002557	OC90 (ENSSMRG00000002509)	ENSSMRG00000002495	ADCY8 (ENSSMRG00000001336) #13	ENSSMRG00000001314	ASAP1 (ENSSMRG00000001248) #14	CYRIB (ENSSMRG00000001213) #15	ENSSMRG00000001204	ENSSMRG00000001137	MYC (ENSSMRG00000001110) #17	LRATD2 (ENSSMRG00000001019) #19	ENSSMRG00000000980	ENSSMRG00000000942	TRIB1 (ENSSMRG00000000914) #20	NSMCE2 (ENSSMRG00000000895) #21	WASHC5 (ENSSMRG00000000800) #22	SQLE (ENSSMRG00000000755) #23	BBS10 (ENSSMRG00000000749)	MTSS1 (ENSSMRG00000000630) #25	ENSSMRG00000000616 #26	TATDN1 (ENSSMRG00000000604) #27	RNF139 (ENSSMRG00000000599) #28	TMEM65 (ENSSMRG00000000583) #30	ENSSMRG00000021498	ENSSMRG00000021496	FER1L6 (ENSSMRG00000021494) #31	FAM91A1 (ENSSMRG00000021493)	ANXA13 (ENSSMRG00000021476)	KLHL38 (ENSSMRG00000021475)	FBXO32 (ENSSMRG00000021474)	NTAQ1 (ENSSMRG00000021473)
Common wall lizard	MODERN SPECIES	15	OC90 (ENSPMRG00000017232)	EFR3A (ENSPMRG00000017250)	ADCY8 (ENSPMRG00000017262) #13	ASAP1 (ENSPMRG00000017289) #14	CYRIB (ENSPMRG00000017337) #15	ENSPMRG00000017352	ENSPMRG00000017356	ENSPMRG00000017379	MYC (ENSPMRG00000017466) #17	LRATD2 (ENSPMRG00000017468) #19	ENSPMRG00000017471	ENSPMRG00000017474	TRIB1 (ENSPMRG00000017479) #20	NSMCE2 (ENSPMRG00000017483) #21	ENSPMRG00000017487	WASHC5 (ENSPMRG00000017493) #22	SQLE (ENSPMRG00000017536) #23	BBS10 (ENSPMRG00000017553)	MTSS1 (ENSPMRG00000017599) #25	NDUFB9 (ENSPMRG00000017626) #26	TATDN1 (ENSPMRG00000017640) #27	RNF139 (ENSPMRG00000017645) #28	ENSPMRG00000017649	ENSPMRG00000017650	FER1L6 (ENSPMRG00000017727) #31	FAM91A1 (ENSPMRG00000018031)	ANXA13 (ENSPMRG00000018046)	ENSPMRG00000018056	KLHL38 (ENSPMRG00000018059)	FBXO32 (ENSPMRG00000018066)	NTAQ1 (ENSPMRG00000018074)
tuatara	MODERN SPECIES	1262														TRIB1 (ENSSPUG00000017614) #20	NSMCE2 (ENSSPUG00000017652) #21	WASHC5 (ENSSPUG00000017735) #22	ENSSPUG00000017752 #23	ENSSPUG00000017759 #23	MTSS1 (ENSSPUG00000017766) #25	NDUFB9 (ENSSPUG00000017781) #26	TATDN1 (ENSSPUG00000017795) #27	RNF139 (ENSSPUG00000017814) #28
Archelosauria	ANCESTRAL SPECIES	5	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00940000165526	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Archosauria	ANCESTRAL SPECIES		ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00940000165526	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Aves	ANCESTRAL SPECIES	9	ENSGT00940000159300	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Neognathae	ANCESTRAL SPECIES		ENSGT00940000159300	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Neognathae_b	ANCESTRAL SPECIES	3	ENSGT00940000159300	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Passeriformes	ANCESTRAL SPECIES		ENSGT00940000159300	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a.c	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Great tit	MODERN SPECIES	11	TG (ENSPMJG00000011760)	PHF20L1 (ENSPMJG00000011759)	TMEM71 (ENSPMJG00000011758)	DNAAF11 (ENSPMJG00000011757)	KCNQ3 (ENSPMJG00000011756)	HHLA1 (ENSPMJG00000011755)	OC90 (ENSPMJG00000011754)	EFR3A (ENSPMJG00000011753)	ADCY8 (ENSPMJG00000011360) #13	ASAP1 (ENSPMJG00000011357) #14	CYRIB (ENSPMJG00000011353) #15	MYC (ENSPMJG00000011339) #17	LRATD2 (ENSPMJG00000011336) #19	TRIB1 (ENSPMJG00000011327) #20	NSMCE2 (ENSPMJG00000011326) #21	WASHC5 (ENSPMJG00000011325) #22	SQLE (ENSPMJG00000011324) #23	MTSS1 (ENSPMJG00000011321) #25	NDUFB9 (ENSPMJG00000011319) #26	TATDN1 (ENSPMJG00000011318) #27	RNF139 (ENSPMJG00000011317) #28	TMEM65 (ENSPMJG00000011315) #30	FER1L6 (ENSPMJG00000011279) #31	FAM91A1 (ENSPMJG00000011278)	ANXA13 (ENSPMJG00000011277)	KLHL38 (ENSPMJG00000011276)	FBXO32 (ENSPMJG00000011275)	NTAQ1 (ENSPMJG00000011274)	ENSPMJG00000011273	ENSPMJG00000011272	ZHX1 (ENSPMJG00000011271)
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00940000159300	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a.c	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Flycatcher	MODERN SPECIES	11	TMEM71 (ENSFALG00000026174)	DNAAF11 (ENSFALG00000002615)	KCNQ3 (ENSFALG00000002606)	OC90 (ENSFALG00000002589)	EFR3A (ENSFALG00000002579)	ENSFALG00000023384	ADCY8 (ENSFALG00000002574) #13	ASAP1 (ENSFALG00000002571) #14	CYRIB (ENSFALG00000002559) #15	ENSFALG00000024584	ENSFALG00000028548 #17	ENSFALG00000002546 #17	LRATD2 (ENSFALG00000014396) #19	TRIB1 (ENSFALG00000002540) #20	NSMCE2 (ENSFALG00000002539) #21	WASHC5 (ENSFALG00000002536) #22	SQLE (ENSFALG00000002533) #23	MTSS1 (ENSFALG00000002532) #25	NDUFB9 (ENSFALG00000002527) #26	TATDN1 (ENSFALG00000002523) #27	RNF139 (ENSFALG00000014388) #28	TMEM65 (ENSFALG00000026314) #30	FER1L6 (ENSFALG00000002499) #31	FAM91A1 (ENSFALG00000002488)	ANXA13 (ENSFALG00000002480)	KLHL38 (ENSFALG00000002470)	FBXO32 (ENSFALG00000002463)	NTAQ1 (ENSFALG00000002461)	ENSFALG00000002454	ZHX1 (ENSFALG00000014380)	C8orf76 (ENSFALG00000002452)
Passeriformes_g	ANCESTRAL SPECIES	3	ENSGT00940000159300	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a.c	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Passeroidea	ANCESTRAL SPECIES	2	ENSGT00940000159300	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a.c	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Common canary	MODERN SPECIES		TG (ENSSCAG00000008417)	PHF20L1 (ENSSCAG00000008072)	TMEM71 (ENSSCAG00000008025)	DNAAF11 (ENSSCAG00000008023)	KCNQ3 (ENSSCAG00000007996)	HHLA1 (ENSSCAG00000007989)	OC90 (ENSSCAG00000007971)	EFR3A (ENSSCAG00000007951)	ADCY8 (ENSSCAG00000007723) #13	ASAP1 (ENSSCAG00000007654) #14	CYRIB (ENSSCAG00000007636) #15	ENSSCAG00000007609 #17	LRATD2 (ENSSCAG00000007590) #19	TRIB1 (ENSSCAG00000007570) #20	NSMCE2 (ENSSCAG00000007554) #21	WASHC5 (ENSSCAG00000007544) #22	SQLE (ENSSCAG00000007538) #23	MTSS1 (ENSSCAG00000007525) #25	NDUFB9 (ENSSCAG00000007494) #26	TATDN1 (ENSSCAG00000007486) #27	RNF139 (ENSSCAG00000007482) #28	TMEM65 (ENSSCAG00000007479) #30	FER1L6 (ENSSCAG00000007456) #31	FAM91A1 (ENSSCAG00000007432)	ANXA13 (ENSSCAG00000007419)	KLHL38 (ENSSCAG00000007412)	FBXO32 (ENSSCAG00000007348)	NTAQ1 (ENSSCAG00000007331)	ENSSCAG00000007297	ZHX1 (ENSSCAG00000007271)	C8orf76 (ENSSCAG00000007265)
Zebra finch	MODERN SPECIES	12	TG (ENSTGUG00000012562)	PHF20L1 (ENSTGUG00000012558)	TMEM71 (ENSTGUG00000012557)	DNAAF11 (ENSTGUG00000012554)	KCNQ3 (ENSTGUG00000012545)	HHLA1 (ENSTGUG00000012544)	OC90 (ENSTGUG00000012542)	EFR3A (ENSTGUG00000012536)	ADCY8 (ENSTGUG00000012532) #13	ASAP1 (ENSTGUG00000012522) #14	CYRIB (ENSTGUG00000012516) #15	MYC (ENSTGUG00000012513) #17	LRATD2 (ENSTGUG00000020681) #19	TRIB1 (ENSTGUG00000028546) #20	NSMCE2 (ENSTGUG00000012507) #21	WASHC5 (ENSTGUG00000012498) #22	SQLE (ENSTGUG00000012490) #23	MTSS1 (ENSTGUG00000012488) #25	NDUFB9 (ENSTGUG00000019009) #26	TATDN1 (ENSTGUG00000012477) #27	RNF139 (ENSTGUG00000012474) #28	TMEM65 (ENSTGUG00000012471) #30	FER1L6 (ENSTGUG00000012463) #31	FAM91A1 (ENSTGUG00000012458)	ANXA13 (ENSTGUG00000012446)	KLHL38 (ENSTGUG00000012445)	FBXO32 (ENSTGUG00000020587)	NTAQ1 (ENSTGUG00000020251)	ENSTGUG00000012435	ZHX1 (ENSTGUG00000020208)	C8orf76 (ENSTGUG00000012429)
Medium ground finch	MODERN SPECIES	24									ADCY8 (ENSGFOG00000009534) #13	ASAP1 (ENSGFOG00000009438) #14	CYRIB (ENSGFOG00000009407) #15	ENSGFOG00000009391 #17	LRATD2 (ENSGFOG00000009376) #19	TRIB1 (ENSGFOG00000009369) #20	NSMCE2 (ENSGFOG00000009359) #21	WASHC5 (ENSGFOG00000009332) #22	SQLE (ENSGFOG00000009315) #23	MTSS1 (ENSGFOG00000009269) #25	NDUFB9 (ENSGFOG00000009255) #26	TATDN1 (ENSGFOG00000009241) #27	RNF139 (ENSGFOG00000009233) #28	TMEM65 (ENSGFOG00000009226) #30	FER1L6 (ENSGFOG00000009198) #31	ENSGFOG00000009187	FAM91A1 (ENSGFOG00000009173)	ANXA13 (ENSGFOG00000009157)	KLHL38 (ENSGFOG00000009149)	FBXO32 (ENSGFOG00000009137)	NTAQ1 (ENSGFOG00000009129)	ENSGFOG00000009118	ZHX1 (ENSGFOG00000009116)
Neognathae_c	ANCESTRAL SPECIES	1	ENSGT00940000177637	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Kakapo	MODERN SPECIES		ENSSHBG00005002367	ENSSHBG00005002394	TMEM71 (ENSSHBG00005002430)	DNAAF11 (ENSSHBG00005002451)	KCNQ3 (ENSSHBG00005002464)	HHLA1 (ENSSHBG00005002487)	OC90 (ENSSHBG00005002512)	EFR3A (ENSSHBG00005002823)	ADCY8 (ENSSHBG00005003773) #13	ASAP1 (ENSSHBG00005004604) #14	CYRIB (ENSSHBG00005006029) #15	MYC (ENSSHBG00005006042) #17	LRATD2 (ENSSHBG00005006064) #19	TRIB1 (ENSSHBG00005006076) #20	NSMCE2 (ENSSHBG00005006093) #21	WASHC5 (ENSSHBG00005006132) #22	SQLE (ENSSHBG00005006171) #23	MTSS1 (ENSSHBG00005006227) #25	NDUFB9 (ENSSHBG00005006256) #26	TATDN1 (ENSSHBG00005006285) #27	RNF139 (ENSSHBG00005006323) #28	TMEM65 (ENSSHBG00005006341) #30	FER1L6 (ENSSHBG00005006377) #31	FAM91A1 (ENSSHBG00005006531)	ANXA13 (ENSSHBG00005006554)	KLHL38 (ENSSHBG00005006574)	FBXO32 (ENSSHBG00005006594)	NTAQ1 (ENSSHBG00005006607)	ATAD2 (ENSSHBG00005006654)	ZHX1 (ENSSHBG00005006727)	C8orf76 (ENSSHBG00005006740)
Golden eagle	MODERN SPECIES	20	ENSACCG00020000575	PHF20L1 (ENSACCG00020000677)	TMEM71 (ENSACCG00020000715)	DNAAF11 (ENSACCG00020000736)	KCNQ3 (ENSACCG00020000775)	HHLA1 (ENSACCG00020000800)	OC90 (ENSACCG00020000830)	EFR3A (ENSACCG00020000940)	ADCY8 (ENSACCG00020001033) #13	ASAP1 (ENSACCG00020001089) #14	CYRIB (ENSACCG00020001147) #15	MYC (ENSACCG00020001175) #17	LRATD2 (ENSACCG00020001187) #19	TRIB1 (ENSACCG00020001190) #20	NSMCE2 (ENSACCG00020001202) #21	WASHC5 (ENSACCG00020001215) #22	SQLE (ENSACCG00020001250) #23	MTSS1 (ENSACCG00020001294) #25	NDUFB9 (ENSACCG00020001330) #26	TATDN1 (ENSACCG00020001366) #27	RNF139 (ENSACCG00020001388) #28	TMEM65 (ENSACCG00020001465) #30	FER1L6 (ENSACCG00020001514) #31	FAM91A1 (ENSACCG00020001563)	ANXA13 (ENSACCG00020001654)	KLHL38 (ENSACCG00020001670)	FBXO32 (ENSACCG00020001680)	ENSACCG00020001690	NTAQ1 (ENSACCG00020001696)	ATAD2 (ENSACCG00020001708)	ZHX1 (ENSACCG00020001729)
Galloanserae	ANCESTRAL SPECIES		ENSGT00940000159104	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Anatidae	ANCESTRAL SPECIES	3	ENSGT00940000159104	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Pink-footed goose	MODERN SPECIES	16														TRIB1 (ENSABRG00000009518) #20	NSMCE2 (ENSABRG00000009525) #21	WASHC5 (ENSABRG00000009538) #22	SQLE (ENSABRG00000009567) #23	MTSS1 (ENSABRG00000009592) #25	NDUFB9 (ENSABRG00000009628) #26	TATDN1 (ENSABRG00000009633) #27	RNF139 (ENSABRG00000009644) #28	TMEM65 (ENSABRG00000009651) #30	FER1L6 (ENSABRG00000009669) #31	FAM91A1 (ENSABRG00000009772)	ANXA13 (ENSABRG00000009827)	KLHL38 (ENSABRG00000009907)	FBXO32 (ENSABRG00000009922)	NTAQ1 (ENSABRG00000009933)	ATAD2 (ENSABRG00000009964)	ZHX1 (ENSABRG00000010052)	C8orf76 (ENSABRG00000010056)
Duck	MODERN SPECIES	10	KCNQ3 (ENSAPLG00000004166)	HHLA1 (ENSAPLG00000004380)	OC90 (ENSAPLG00000004457)	ENSAPLG00000021459	EFR3A (ENSAPLG00000004684)	ADCY8 (ENSAPLG00000005493) #13	ENSAPLG00000024578	ASAP1 (ENSAPLG00000005640) #14	CYRIB (ENSAPLG00000000687) #15	ENSAPLG00000021354	MYC (ENSAPLG00000013997) #17	LRATD2 (ENSAPLG00000002038) #19	ENSAPLG00000028101	TRIB1 (ENSAPLG00000014001) #20	NSMCE2 (ENSAPLG00000014092) #21	WASHC5 (ENSAPLG00000014127) #22	ENSAPLG00000014831 #23	ENSAPLG00000020771 #23	MTSS1 (ENSAPLG00000015070) #25	ENSAPLG00000017522	NDUFB9 (ENSAPLG00000007143) #26	TATDN1 (ENSAPLG00000006883) #27	RNF139 (ENSAPLG00000011464) #28	FER1L6 (ENSAPLG00000006119) #31	FAM91A1 (ENSAPLG00000005727)	ANXA13 (ENSAPLG00000005494)	KLHL38 (ENSAPLG00000005471)	FBXO32 (ENSAPLG00000005288)	ATAD2 (ENSAPLG00000023462)	ZHX1 (ENSAPLG00000010954)	C8orf76 (ENSAPLG00000010962)
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00940000159300	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00940000159104	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Chicken	MODERN SPECIES	11	TG (ENSGALG00010008164)	PHF20L1 (ENSGALG00010008387)	TMEM71 (ENSGALG00010008354)	LRRC6 (ENSGALG00010008350)	KCNQ3 (ENSGALG00010008154)	HHLA1 (ENSGALG00010008137)	OC90 (ENSGALG00010008131)	EFR3A (ENSGALG00010008093)	ADCY8 (ENSGALG00010007962) #13	ASAP1 (ENSGALG00010008047) #14	FAM49B (ENSGALG00010008233) #15	MYC (ENSGALG00010007986) #17	LRATD2 (ENSGALG00010008405) #19	TRIB1 (ENSGALG00010008910) #20	NSMCE2 (ENSGALG00010008897) #21	WASHC5 (ENSGALG00010008866) #22	SQLE (ENSGALG00010008860) #23	MTSS1 (ENSGALG00010008832) #25	NDUFB9 (ENSGALG00010008731) #26	TATDN1 (ENSGALG00010008716) #27	RNF139 (ENSGALG00010008504) #28	TMEM65 (ENSGALG00010009007) #30	FER1L6 (ENSGALG00010008945) #31	FAM91A1 (ENSGALG00010008301)	ANXA13 (ENSGALG00010008286)	KLHL38 (ENSGALG00010008250)	FBXO32 (ENSGALG00010008245)	WDYHV1 (ENSGALG00010008238)	ATAD2 (ENSGALG00010008023)	ZHX1 (ENSGALG00010009721)	C8orf76 (ENSGALG00010009730)
Turkey	MODERN SPECIES	22	PYCR3 (ENSMGAG00000013046)	TIGD5 (ENSMGAG00000013045)	EEF1D (ENSMGAG00000013035)	NAPRT (ENSMGAG00000013029)	ENSMGAG00000021146	ADCY8 (ENSMGAG00000012773) #13	ASAP1 (ENSMGAG00000012720) #14	CYRIB (ENSMGAG00000012710) #15	ENSMGAG00000018595 #17	ENSMGAG00000015872 #19	ENSMGAG00000020437	ENSMGAG00000012671 #27	ENSMGAG00000015869 #28	NDUFB9 (ENSMGAG00000012681) #26	MTSS1 (ENSMGAG00000012682) #25	ENSMGAG00000012696 #22	ENSMGAG00000012691 #23	NSMCE2 (ENSMGAG00000012705) #21	ENSMGAG00000022986 #20	ENSMGAG00000021180	TMEM65 (ENSMGAG00000012666) #30	FER1L6 (ENSMGAG00000012654) #31	FAM91A1 (ENSMGAG00000012639)	ANXA13 (ENSMGAG00000012623)	KLHL38 (ENSMGAG00000012617)	FBXO32 (ENSMGAG00000012610)	NTAQ1 (ENSMGAG00000012605)	ATAD2 (ENSMGAG00000012599)	ZHX1 (ENSMGAG00000012584)	C8orf76 (ENSMGAG00000012607)	FAM83A (ENSMGAG00000012606)
Japanese quail	MODERN SPECIES	11	PHF20L1 (ENSCJPG00005008276)	TMEM71 (ENSCJPG00005008273)	DNAAF11 (ENSCJPG00005008272)	KCNQ3 (ENSCJPG00005008253)	HHLA1 (ENSCJPG00005008230)	OC90 (ENSCJPG00005008229)	EFR3A (ENSCJPG00005008226)	ADCY8 (ENSCJPG00005008192) #13	ASAP1 (ENSCJPG00005006087) #14	CYRIB (ENSCJPG00005006069) #15	ENSCJPG00005006053	MYC (ENSCJPG00005006041) #17	LRATD2 (ENSCJPG00005006030) #19	TRIB1 (ENSCJPG00005006021) #20	NSMCE2 (ENSCJPG00005006017) #21	WASHC5 (ENSCJPG00005006014) #22	SQLE (ENSCJPG00005006009) #23	MTSS1 (ENSCJPG00005005993) #25	NDUFB9 (ENSCJPG00005005988) #26	TATDN1 (ENSCJPG00005005966) #27	RNF139 (ENSCJPG00005005964) #28	TMEM65 (ENSCJPG00005005962) #30	FER1L6 (ENSCJPG00005005959) #31	FAM91A1 (ENSCJPG00005005939)	ANXA13 (ENSCJPG00005005856)	KLHL38 (ENSCJPG00005005737)	FBXO32 (ENSCJPG00005005736)	ENSCJPG00005005734	ZHX1 (ENSCJPG00005005732)	C8orf76 (ENSCJPG00005005730)	FAM83A (ENSCJPG00005005727)
African ostrich	MODERN SPECIES	638	MFF (ENSSCUG00000009958)	MRPL44 (ENSSCUG00000009964)	AGFG1 (ENSSCUG00000009968)	ENSSCUG00000009974	ENSSCUG00000009976	ENSSCUG00000009977	ENSSCUG00000009983	SPHKAP (ENSSCUG00000009988)	PID1 (ENSSCUG00000009995)	DNER (ENSSCUG00000010006)	CYRIB (ENSSCUG00000010026) #15	ENSSCUG00000010062 #17	LRATD2 (ENSSCUG00000010071) #19	TRIB1 (ENSSCUG00000008650) #20	NSMCE2 (ENSSCUG00000008653) #21	WASHC5 (ENSSCUG00000008654) #22	SQLE (ENSSCUG00000008655) #23	MTSS1 (ENSSCUG00000008656) #25	NDUFB9 (ENSSCUG00000008662) #26	TATDN1 (ENSSCUG00000008664) #27	RNF139 (ENSSCUG00000008667) #28
Australian saltwater crocodile	MODERN SPECIES		PHF20L1 (ENSCPRG00005011418)	TMEM71 (ENSCPRG00005011378)	KCNQ3 (ENSCPRG00005011299)	HHLA1 (ENSCPRG00005011256)	OC90 (ENSCPRG00005011251)	EFR3A (ENSCPRG00005010770)	ADCY8 (ENSCPRG00005010675) #13	ASAP1 (ENSCPRG00005009896) #14	ENSCPRG00005009824	CYRIB (ENSCPRG00005009810) #15	ENSCPRG00005009779 #17	ENSCPRG00005009777	LRATD2 (ENSCPRG00005009758) #19	TRIB1 (ENSCPRG00005009748) #20	ENSCPRG00005009732	WASHC5 (ENSCPRG00005009230) #22	SQLE (ENSCPRG00005009064) #23	MTSS1 (ENSCPRG00005009029) #25	NDUFB9 (ENSCPRG00005009015) #26	TATDN1 (ENSCPRG00005009009) #27	RNF139 (ENSCPRG00005009007) #28	TMEM65 (ENSCPRG00005008990) #30	FER1L6 (ENSCPRG00005008931) #31	FAM91A1 (ENSCPRG00005008894)	ANXA13 (ENSCPRG00005008888)	KLHL38 (ENSCPRG00005008841)	FBXO32 (ENSCPRG00005008832)	NTAQ1 (ENSCPRG00005008775)	ATAD2 (ENSCPRG00005008758)	ZHX1 (ENSCPRG00005008743)	C8orf76 (ENSCPRG00005008741)
Cryptodira	ANCESTRAL SPECIES	22	ENSGT00940000156215	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00940000165526	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Testudinoidea	ANCESTRAL SPECIES	16	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00960000189024	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00940000165526.f	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Emydidae	ANCESTRAL SPECIES	15	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00960000189024	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00940000165526.f	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a	ENSGT00390000011435
Three-toed box turtle	MODERN SPECIES	24	DNAAF11 (ENSTMTG00000018079)	ENSTMTG00000018065	KCNQ3 (ENSTMTG00000018042)	HHLA1 (ENSTMTG00000018016)	OC90 (ENSTMTG00000017984)	EFR3A (ENSTMTG00000017900)	ENSTMTG00000017882	ADCY8 (ENSTMTG00000017786) #13	ASAP1 (ENSTMTG00000015540) #14	ENSTMTG00000015401	CYRIB (ENSTMTG00000015369) #15	MYC (ENSTMTG00000015358) #17	LRATD2 (ENSTMTG00000015339) #19	TRIB1 (ENSTMTG00000015308) #20	NSMCE2 (ENSTMTG00000015297) #21	WASHC5 (ENSTMTG00000015277) #22	SQLE (ENSTMTG00000015236) #23	MTSS1 (ENSTMTG00000015142) #25	NDUFB9 (ENSTMTG00000015115) #26	TATDN1 (ENSTMTG00000015092) #27	RNF139 (ENSTMTG00000015084) #28	FER1L6 (ENSTMTG00000014989) #31	FAM91A1 (ENSTMTG00000014954)	ANXA13 (ENSTMTG00000014929)	KLHL38 (ENSTMTG00000014921)	FBXO32 (ENSTMTG00000014904)	NTAQ1 (ENSTMTG00000014890)	ATAD2 (ENSTMTG00000013494)	ZHX1 (ENSTMTG00000013390)	FAM83A (ENSTMTG00000013382)	TBC1D31 (ENSTMTG00000013246)
painted turtle	MODERN SPECIES	2424	KCNQ3 (ENSCPBG00000020379)	HHLA1 (ENSCPBG00000020408)	OC90 (ENSCPBG00000020419)	EFR3A (ENSCPBG00000020427)	ENSCPBG00000020440	ADCY8 (ENSCPBG00000020454) #13	ASAP1 (ENSCPBG00000020558) #14	ENSCPBG00000020567	ENSCPBG00000020570	CYRIB (ENSCPBG00000020574) #15	ENSCPBG00000020575	MYC (ENSCPBG00000020576) #17	LRATD2 (ENSCPBG00000020586) #19	TRIB1 (ENSCPBG00000020593) #20	NSMCE2 (ENSCPBG00000020596) #21	WASHC5 (ENSCPBG00000020601) #22	SQLE (ENSCPBG00000020605) #23	MTSS1 (ENSCPBG00000020613) #25	NDUFB9 (ENSCPBG00000020618) #26	TATDN1 (ENSCPBG00000020621) #27	RNF139 (ENSCPBG00000020623) #28	TMEM65 (ENSCPBG00000020624) #30	FER1L6 (ENSCPBG00000020627) #31	FAM91A1 (ENSCPBG00000020634)	ANXA13 (ENSCPBG00000020644)	KLHL38 (ENSCPBG00000020651)	FBXO32 (ENSCPBG00000020653)	NTAQ1 (ENSCPBG00000020658)	ATAD2 (ENSCPBG00000020667)	ZHX1 (ENSCPBG00000020682)	C8orf76 (ENSCPBG00000020686)
Testudinidae	ANCESTRAL SPECIES	27	ENSGT00390000011144	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00960000189024	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00940000165526.f	ENSGT00390000015159.b #15	ENSGT00940000155285.b #17	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00960000187692	ENSGT00940000156272.b #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Abingdon island giant tortoise	MODERN SPECIES	939									ENSCABG00000001377	ENSCABG00000001368	MYC (ENSCABG00000001363) #17	LRATD2 (ENSCABG00000001351) #19	ENSCABG00000001346 #20	ENSCABG00000001345 #20	NSMCE2 (ENSCABG00000001343) #21	WASHC5 (ENSCABG00000001335) #22	SQLE (ENSCABG00000001328) #23
Chinese turtle	MODERN SPECIES	1134	KCNQ3 (ENSPSIG00000005786)	HHLA1 (ENSPSIG00000006442)	OC90 (ENSPSIG00000006449)	EFR3A (ENSPSIG00000006464)	ENSPSIG00000007602	ENSPSIG00000007621	ADCY8 (ENSPSIG00000007628) #13	ASAP1 (ENSPSIG00000007728) #14	ENSPSIG00000008080	CYRIB (ENSPSIG00000008087) #15	MYC (ENSPSIG00000008301) #17	LRATD2 (ENSPSIG00000008347) #19	ENSPSIG00000000817	TRIB1 (ENSPSIG00000008361) #20	NSMCE2 (ENSPSIG00000008439) #21	WASHC5 (ENSPSIG00000008477) #22	SQLE (ENSPSIG00000008578) #23	MTSS1 (ENSPSIG00000008731) #25	NDUFB9 (ENSPSIG00000008938) #26	TATDN1 (ENSPSIG00000008996) #27	RNF139 (ENSPSIG00000009001) #28	TMEM65 (ENSPSIG00000009013) #30
Anura	ANCESTRAL SPECIES	10	ENSGT00940000158587	ENSGT00940000159104	ENSGT00940000159300	ENSGT00940000156215	ENSGT00940000158506	ENSGT00940000159760	ENSGT00530000064699	ENSGT00940000159042	ENSGT00390000002143.a	ENSGT00940000158742 #13	ENSGT00940000158547 #14	ENSGT00940000165526	ENSGT00940000159198 #19	ENSGT00950000182986.a.b.b #20	ENSGT00390000013961 #21	ENSGT00390000011137 #22	ENSGT00390000011759 #23	ENSGT00910000144630.a.f	ENSGT00950000183156.a.b.b.b.b.a #25	ENSGT00390000005809 #26	ENSGT00940000156272 #27	ENSGT00940000158932 #28	ENSGT00390000017802 #30	ENSGT00940000159069 #31	ENSGT00390000009543	ENSGT00940000159797	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00390000014398	ENSGT00550000074694.a	ENSGT00950000182893.a.a.a.a
Frog	MODERN SPECIES	6	efr3a (ENSXETG00000023031)	ENSXETG00000037811	adcy8 (ENSXETG00000036330) #13	ENSXETG00000041432	asap1 (ENSXETG00000017737) #14	42Sp50 (ENSXETG00000017744)	cyrib (ENSXETG00000017755) #15	ENSXETG00000046807	ENSXETG00000041686	ENSXETG00000043453	myc (ENSXETG00000025372) #17	ENSXETG00000046371	lratd2 (ENSXETG00000046349) #19	mcm7 (ENSXETG00000017499) #20	nsmce2 (ENSXETG00000037257) #21	washc5 (ENSXETG00000017490) #22	rnf139 (ENSXETG00000017487) #28	tatdn1 (ENSXETG00000017477) #27	ndufb9 (ENSXETG00000030956) #26	ENSXETG00000049126	mtss1.1 (ENSXETG00000017462) #25	cat2 (ENSXETG00000017451)	tmem65 (ENSXETG00000049163) #30	fer1l6 (ENSXETG00000023247) #31	fam91a1 (ENSXETG00000023243)	anxa13 (ENSXETG00000023236)	klhl38 (ENSXETG00000023230)	fbxo32 (ENSXETG00000023228)	ntaq1 (ENSXETG00000041404)	atad2 (ENSXETG00000023215)	ENSXETG00000049483
Leishan spiny toad	MODERN SPECIES	8	CYRIB (ENSLLEG00000005585) #15	ENSLLEG00000005519	ENSLLEG00000005496	ENSLLEG00000005478	ENSLLEG00000005461	ENSLLEG00000005446	MYC (ENSLLEG00000005334) #17	ENSLLEG00000005295	ENSLLEG00000005283	ENSLLEG00000016321	ENSLLEG00000016299	LRATD2 (ENSLLEG00000016277) #19	ENSLLEG00000016251	TRIB1 (ENSLLEG00000016209) #20	NSMCE2 (ENSLLEG00000016144) #21	WASHC5 (ENSLLEG00000014791) #22	SQLE (ENSLLEG00000014639) #23	ENSLLEG00000014608	ENSLLEG00000014142	MTSS1 (ENSLLEG00000013998) #25	NDUFB9 (ENSLLEG00000013944) #26	TATDN1 (ENSLLEG00000013747) #27	RNF139 (ENSLLEG00000013689) #28	ENSLLEG00000013666	TMEM65 (ENSLLEG00000013572) #30	ENSLLEG00000013477 #31	ENSLLEG00000013368 #31	ENSLLEG00000013337	ANXA13 (ENSLLEG00000013215)	KLHL38 (ENSLLEG00000013181)	FBXO32 (ENSLLEG00000013128)
Coelacanth	MODERN SPECIES	1516															SQLE (ENSLACG00000001320) #23	WASHC5 (ENSLACG00000002925) #22	TRIB1 (ENSLACG00000009193) #20
Actinopterygii	ANCESTRAL SPECIES	515															ENSGT00390000011759 #23	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00390000013961 #21	ENSGT00950000182986.a.b.b #20	ENSGT00940000159198.g #19
Reedfish	MODERN SPECIES	4	zgc:136493 (ENSECRG00000017257)	jarid2b (ENSECRG00000017190)	dtnbp1a (ENSECRG00000017149)	mylipb (ENSECRG00000017069)	gmpr (ENSECRG00000017011)	ENSECRG00000016982	TBC1D31 (ENSECRG00000016926)	derl1 (ENSECRG00000016883)	zhx2a (ENSECRG00000016858)	ints8 (ENSECRG00000016763)	ccne2 (ENSECRG00000016705)	tp53inp1 (ENSECRG00000016677)	nagpa (ENSECRG00000016648)	NDUFAF6 (ENSECRG00000016618)	sqlea (ENSECRG00000016571) #23	washc5 (ENSECRG00000016498) #22	ENSECRG00000016449	TRIB1 (ENSECRG00000016433) #20	lratd2a (ENSECRG00000016410) #19	ENSECRG00000016206	ENSECRG00000016106	cep76 (ENSECRG00000016050)	psmg2 (ENSECRG00000016027)	ptpn2a (ENSECRG00000015993)	seh1l (ENSECRG00000015958)	FER1L6 (ENSECRG00000015488) #31	fbxo32 (ENSECRG00000015206)	ndufb9 (ENSECRG00000015066) #26	TATDN1 (ENSECRG00000015013) #27	rnf139 (ENSECRG00000014986) #28	TMEM65 (ENSECRG00000014965) #30
Neopterygii	ANCESTRAL SPECIES	7	ENSGT00940000164463	ENSGT00950000183176.b.f	ENSGT00390000017350	ENSGT00390000010285.c	ENSGT00940000158322.i	ENSGT00940000158322.j	ENSGT00390000010606	ENSGT00940000156368.b	ENSGT00940000157655	ENSGT00940000157830.d	ENSGT00940000156966	ENSGT00390000008778	ENSGT00530000063647.A.b.a	ENSGT00390000002833	ENSGT00940000159511	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00390000013961 #21	ENSGT00950000182986.a.b.b #20	ENSGT00940000159198.g #19	ENSGT00390000009543	ENSGT00940000157647	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT00390000003058.b.b
Spotted gar	MODERN SPECIES	649	pip4p2 (ENSLOCG00000010191)	otud6b (ENSLOCG00000010181)	ENSLOCG00000010170	runx1t1 (ENSLOCG00000010158)	triqk (ENSLOCG00000010149)	cibar1 (ENSLOCG00000010142)	rbm12bb (ENSLOCG00000018344)	TMEM67 (ENSLOCG00000010134)	pdp1 (ENSLOCG00000018343)	cdh17 (ENSLOCG00000010121)	gem (ENSLOCG00000010118)	RAD54B (ENSLOCG00000010100)	ENSLOCG00000010092	VIRMA (ENSLOCG00000010076)	ENSLOCG00000010059	washc5 (ENSLOCG00000010046) #22	NSMCE2 (ENSLOCG00000010034) #21	TRIB1 (ENSLOCG00000010029) #20	lratd2a (ENSLOCG00000018342) #19	fam91a1 (ENSLOCG00000010016)	klhl38a (ENSLOCG00000010012)	fbxo32 (ENSLOCG00000009995)	PRELID3A (ENSLOCG00000009987)	ENSLOCG00000009960	BAALC (ENSLOCG00000009950)	atp6v1c1b (ENSLOCG00000009938)	azin1b (ENSLOCG00000009927)	ubr5 (ENSLOCG00000009882)	rrm2b (ENSLOCG00000009872)	mtdha (ENSLOCG00000009864)	laptm4b (ENSLOCG00000009853)
Osteoglossocephalai	ANCESTRAL SPECIES	174	ENSGT01090000260119	ENSGT00930000151031	ENSGT00940000157688	ENSGT00950000182992.a.a	ENSGT00740000115874	ENSGT00940000158322.j	ENSGT00390000010606	ENSGT00940000156368.b	ENSGT00940000157655	ENSGT00940000157830.d	ENSGT00940000156966	ENSGT00390000008778	ENSGT00530000063647.A.b.a	ENSGT00390000002833	ENSGT00940000159511	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00950000182986.a.b.b #20	ENSGT00940000159198.g #19	ENSGT00390000009543	ENSGT00940000157647.c	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT00940000178810
Osteoglossiformes	ANCESTRAL SPECIES	20	ENSGT01000000214440.A.b	ENSGT00930000151031	ENSGT00940000157688	ENSGT00950000182992.a.a	ENSGT00740000115874	ENSGT00940000158322.j	ENSGT00390000010606	ENSGT00940000156368.b	ENSGT00940000157655	ENSGT00940000157830.d	ENSGT00940000156966	ENSGT00390000008778	ENSGT00530000063647.A.b.b.a	ENSGT00390000002833	ENSGT00940000159511	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00950000182986.a.b.b.o.a #20	ENSGT00940000157647.c	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT00940000178810	ENSGT00390000003058.b.a.a.a.a.g	ENSGT00940000178526	ENSGT00390000004263.a.d.b	ENSGT00950000182995.e.b.`b.a	ENSGT00940000159405	ENSGT00940000156357.j	ENSGT00940000154181.b	ENSGT00940000153446.a.a.w.a	ENSGT00940000158008
P. kingsleyae	MODERN SPECIES	1	ENSPKIG00000014680	erp44 (ENSPKIG00000014706)	invs (ENSPKIG00000014755)	tex10 (ENSPKIG00000014782)	ENSPKIG00000014817	rbm12ba (ENSPKIG00000014851)	TMEM67 (ENSPKIG00000014869)	pdp1 (ENSPKIG00000014905)	cdh17 (ENSPKIG00000014915)	gem (ENSPKIG00000014954)	RAD54B (ENSPKIG00000014974)	FSBP (ENSPKIG00000015000)	ENSPKIG00000015013	VIRMA (ENSPKIG00000015043)	esrp1 (ENSPKIG00000015135)	washc5 (ENSPKIG00000015294) #22	nsmce2 (ENSPKIG00000015376)	TRIB1 (ENSPKIG00000015389) #20	ENSPKIG00000015405	LRATD2 (ENSPKIG00000015418) #19	klhl38a (ENSPKIG00000015435)	fbxo32 (ENSPKIG00000015472)	PRELID3A (ENSPKIG00000015520)	spire1a (ENSPKIG00000015599)	ATP6V1C1 (ENSPKIG00000015818)	ENSPKIG00000015872	azin1b (ENSPKIG00000015901)	ENSPKIG00000015931	ubr5 (ENSPKIG00000016015)	ENSPKIG00000016174	LAPTM4B (ENSPKIG00000016191)
Asian bonytongue	MODERN SPECIES	9	nr4a3 (ENSSFOG00015009756)	stx17 (ENSSFOG00015009711)	erp44 (ENSSFOG00015009632)	invs (ENSSFOG00015009586)	tex10 (ENSSFOG00015009468)	ENSSFOG00015009435	rbm12ba (ENSSFOG00015009427)	TMEM67 (ENSSFOG00015009219)	pdp1 (ENSSFOG00015009178)	cdh17 (ENSSFOG00015008712)	gem (ENSSFOG00015003558)	RAD54B (ENSSFOG00015008483)	ENSSFOG00015008393	VIRMA (ENSSFOG00015008291)	esrp1 (ENSSFOG00015008175)	washc5 (ENSSFOG00015008030) #22	ENSSFOG00015008007	TRIB1 (ENSSFOG00015025070) #20	lratd2b (ENSSFOG00015030391) #19	klhl38a (ENSSFOG00015007968)	fbxo32 (ENSSFOG00015007927)	PRELID3A (ENSSFOG00015032228)	ENSSFOG00015007869	spire1a (ENSSFOG00015007837)	ENSSFOG00015032303	ATP6V1C1 (ENSSFOG00015007790)	azin1b (ENSSFOG00015007644)	KLF10 (ENSSFOG00015007589)	mtdha (ENSSFOG00015033320)	LAPTM4B (ENSSFOG00015007531)	MATN2 (ENSSFOG00015026308)
Clupeocephala	ANCESTRAL SPECIES	478																ENSGT00390000011137 #22	ENSGT00390000013961 #21	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT00940000178810
Otomorpha	ANCESTRAL SPECIES	549																ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT00940000178810
Otophysi	ANCESTRAL SPECIES	1	ENSGT00390000005711	ENSGT00940000155236	ENSGT00940000153269.b.b	ENSGT01030000234527.A.a.a.a	ENSGT00530000063823.b.b.a	ENSGT00390000008074	ENSGT00940000155187.B	ENSGT00390000011759.e #23	ENSGT00940000158819	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00390000014996	ENSGT00550000074870	ENSGT00550000074694.a.k	ENSGT00950000182893.a.a.a.a.b	ENSGT00390000011137 #22	ENSGT00400000022250	ENSGT00940000156889	ENSGT00530000063909.b	ENSGT00940000165993	ENSGT00940000159175	ENSGT00940000159418	ENSGT01060000248556.C	ENSGT00940000161184	ENSGT00390000007526	ENSGT00390000017837.b	ENSGT00950000183184.a.b	ENSGT00940000156737.a	ENSGT00940000155958	ENSGT00410000028469	ENSGT00940000160479
Characiphysae	ANCESTRAL SPECIES	37	ENSGT00390000005711	ENSGT00940000155236	ENSGT00940000153269.b.b	ENSGT01030000234527.A.a.a.a	ENSGT00530000063823.b.b.a	ENSGT00390000008074	ENSGT00940000155187.B	ENSGT00390000011759.e #23	ENSGT00940000158819	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00390000014996	ENSGT00550000074870	ENSGT00550000074694.a.k	ENSGT00950000182893.a.a.a.a.b	ENSGT00390000011137 #22	ENSGT00940000156889	ENSGT00400000022250	ENSGT00530000063909.b	ENSGT00940000165993	ENSGT00940000159175	ENSGT00940000159418	ENSGT01060000248556.C	ENSGT00940000161184	ENSGT00390000007526	ENSGT00390000017837.b	ENSGT00950000183184.a.b	ENSGT00940000156737.a	ENSGT00940000155958	ENSGT00390000008042.B	ENSGT00940000160479
Channel catfish	MODERN SPECIES	15	dcaf13 (ENSIPUG00000022430)	RIMS2 (ENSIPUG00000022446)	dcstamp (ENSIPUG00000022472)	dpys (ENSIPUG00000022479)	zfpm2 (ENSIPUG00000022508)	ENSIPUG00000022534	oxr1 (ENSIPUG00000022544)	sqle (ENSIPUG00000022573) #23	rnf144b (ENSIPUG00000022584)	ENSIPUG00000022590	ccdc127 (ENSIPUG00000022591)	mrpl32 (ENSIPUG00000022592)	ENSIPUG00000022608	atad2 (ENSIPUG00000022624)	ZHX1 (ENSIPUG00000022650)	washc5 (ENSIPUG00000022653) #22	adam22 (ENSIPUG00000022674)	cldn12 (ENSIPUG00000022731)	ENSIPUG00000022733	DBF4 (ENSIPUG00000022737)	slc25a40 (ENSIPUG00000022756)	rundc3b (ENSIPUG00000022762)	ABCB1 (ENSIPUG00000022776)	CROT (ENSIPUG00000022846)	acbd7 (ENSIPUG00000022876)	rpp38 (ENSIPUG00000022879)	nmt2 (ENSIPUG00000022886)	fam171a1 (ENSIPUG00000022898)	ENSIPUG00000022906	A33 (ENSIPUG00000022908)	ENSIPUG00000022918
Characiphysae_b	ANCESTRAL SPECIES	37	ENSGT00390000005711	ENSGT00940000155236	ENSGT00940000153269.b.b	ENSGT01030000234527.A.a.a.a	ENSGT00530000063823.b.b.a	ENSGT00390000008074	ENSGT00940000155187.B	ENSGT00390000011759.e #23	ENSGT00940000158819	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00390000014996	ENSGT00550000074870	ENSGT00550000074694.a.k	ENSGT00950000182893.a.a.a.a.b	ENSGT00390000011137 #22	ENSGT00940000156889	ENSGT00400000022250	ENSGT00530000063909.b	ENSGT00940000165993	ENSGT00940000159175	ENSGT00940000159418	ENSGT01060000248556.C	ENSGT00940000161184	ENSGT00390000007526	ENSGT00390000017837.b	ENSGT00950000183184.a.b	ENSGT00940000156737.a	ENSGT00940000155958	ENSGT00390000008042.B	ENSGT00940000160479
Characoidei	ANCESTRAL SPECIES	34	ENSGT00390000005711	ENSGT00940000155236	ENSGT00940000153269.b.b	ENSGT01030000234527.A.a.a.a	ENSGT00530000063823.b.b.a	ENSGT00390000008074	ENSGT00940000155187.B	ENSGT00390000011759.e #23	ENSGT00940000158819	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00390000014996	ENSGT00550000074870	ENSGT00550000074694.a.k	ENSGT00950000182893.a.a.a.a.b	ENSGT00390000011137 #22	ENSGT00940000156889	ENSGT00400000022250	ENSGT00530000063909.b	ENSGT00940000165993	ENSGT00940000159175	ENSGT00940000159418	ENSGT01060000248556.C	ENSGT00940000161184	ENSGT00390000007526	ENSGT00390000017837.b	ENSGT00950000183184.a.b	ENSGT00940000156737.a	ENSGT00940000155958	ENSGT00390000008042.B	ENSGT00940000160479
Red-bellied piranha	MODERN SPECIES	369						ENSPNAG00000004759	oxr1b (ENSPNAG00000015098)	sqlea (ENSPNAG00000015175) #23	rnf144b (ENSPNAG00000003372)	ENSPNAG00000015214	ccdc127a (ENSPNAG00000015226)	mrpl32 (ENSPNAG00000015235)	ENSPNAG00000015282	ENSPNAG00000015426	ZHX1 (ENSPNAG00000015464)	washc5 (ENSPNAG00000015600) #22	cldn12 (ENSPNAG00000015627)	ADAM22 (ENSPNAG00000015654)	dbf4 (ENSPNAG00000015722)	slc25a40 (ENSPNAG00000015789)	rundc3b (ENSPNAG00000015870)	abcb4 (ENSPNAG00000016015)	crot (ENSPNAG00000016077)	acbd7 (ENSPNAG00000016116)	ucp1 (ENSPNAG00000016153)	elmod2 (ENSPNAG00000006951)	ENSPNAG00000016184
Mexicana tetra	MODERN SPECIES	800										ENSAMXG00000039918	ENSAMXG00000016340	mrpl32 (ENSAMXG00000037068)	psma2a (ENSAMXG00000016335)	ATAD2 (ENSAMXG00000016325)	ZHX1 (ENSAMXG00000042835)	washc5 (ENSAMXG00000016315) #22	ENSAMXG00000033444	ENSAMXG00000031226	ADAM22 (ENSAMXG00000016271)	cldn12 (ENSAMXG00000016251)	dbf4 (ENSAMXG00000037607)	slc25a40 (ENSAMXG00000040995)	rundc3b (ENSAMXG00000016218)	ENSAMXG00000038083
Electric eel	MODERN SPECIES	136	ENSEEEG00000004382	ENSEEEG00000004381	ENSEEEG00000004380	dpys (ENSEEEG00000004379)	zfpm2a (ENSEEEG00000004378)	ENSEEEG00000004377	oxr1b (ENSEEEG00000004237)	sqlea (ENSEEEG00000004226) #23	rnf144b (ENSEEEG00000004221)	ENSEEEG00000004219	ccdc127a (ENSEEEG00000004217)	mrpl32 (ENSEEEG00000004216)	psma2a (ENSEEEG00000004213)	ATAD2 (ENSEEEG00000004199)	ZHX1 (ENSEEEG00000004187)	washc5 (ENSEEEG00000004162) #22	cldn12 (ENSEEEG00000004154)	ADAM22 (ENSEEEG00000004148)	dbf4 (ENSEEEG00000004145)	slc25a40 (ENSEEEG00000004143)	rundc3b (ENSEEEG00000004142)	abcb4 (ENSEEEG00000003519)	crot (ENSEEEG00000003461)	acbd7 (ENSEEEG00000003452)	rpp38 (ENSEEEG00000003451)	nmt2 (ENSEEEG00000003282)	ENSEEEG00000003271	ITGA8 (ENSEEEG00000003262)
Cyprinoidei	ANCESTRAL SPECIES	25	ENSGT00390000005711	ENSGT00940000155236	ENSGT00940000153269.b.b	ENSGT01030000234527.A.a.a.a	ENSGT00530000063823.b.b.a	ENSGT00390000008074	ENSGT00940000155187.B	ENSGT00390000011759.e #23	ENSGT00940000158819	ENSGT00390000012014.A	ENSGT00390000008818	ENSGT00390000014996	ENSGT00550000074870.u.a.a	ENSGT00550000074694.a.k	ENSGT00950000182893.a.a.a.a.b	ENSGT00390000011137 #22	ENSGT00400000022250	ENSGT00940000156889	ENSGT00530000063909.b	ENSGT00940000165993	ENSGT00940000159175	ENSGT00940000154870.A.a	ENSGT00940000180170	ENSGT01080000258118	ENSGT00400000025005.b	ENSGT00390000013847	ENSGT00950000182919.B.a.g	ENSGT00940000159283.c.b	ENSGT00950000183112.b.b	ENSGT00940000158522.l	ENSGT00990000203984
Cyprininae	ANCESTRAL SPECIES	83	ENSGT00530000063823.b.b.a.m	ENSGT00390000008074.b	ENSGT00940000155187.B.o.b	ENSGT00390000011759.e.b #23	ENSGT00940000158819.j	ENSGT00390000012014.A.e	ENSGT00390000008818.r	ENSGT00390000014996.g	ENSGT00550000074870.u.a.a	ENSGT00550000074694.a.k	ENSGT00950000182893.a.a.a.a.b.b	ENSGT00390000014996.h	ENSGT00550000074870.v	ENSGT00940000165417	ENSGT00950000182893.a.a.a.a.b.a	ENSGT00390000011137 #22	ENSGT00400000022250.b	ENSGT00530000063909.b.b	ENSGT00940000165993.b	ENSGT00940000159175.a	ENSGT00940000154870.A.a.a	ENSGT00390000013847.a.b	ENSGT00950000182919.B.a.g.h	ENSGT00940000156889.h	ENSGT00400000022250.a	ENSGT00940000156889.g	ENSGT00530000063909.b.a	ENSGT00940000165993.a	ENSGT00940000159175.b	ENSGT00940000154870.A.a.b	ENSGT00390000013847.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	35	COL14A1 (ENSCARG00000039769)	mrpl13 (ENSCARG00000039538)	sntb1 (ENSCARG00000039520)	has2 (ENSCARG00000039506)	ANKIB1 (ENSCARG00000039423)	ENSCARG00000039390	stmn2a (ENSCARG00000039377)	upp1 (ENSCARG00000039324)	rnf144b (ENSCARG00000039292)	ENSCARG00000039278	ccdc127a (ENSCARG00000039248)	mrpl32 (ENSCARG00000039215)	psma2a (ENSCARG00000038490)	ATAD2 (ENSCARG00000037549)	ZHX1 (ENSCARG00000037438)	washc5 (ENSCARG00000037124) #22	cldn12 (ENSCARG00000037062)	ADAM22 (ENSCARG00000028143)	dbf4 (ENSCARG00000027842)	slc25a40 (ENSCARG00000027814)	rundc3b (ENSCARG00000027797)	ENSCARG00000027767	ENSCARG00000027738	mtx1a (ENSCARG00000027702)	txnipb (ENSCARG00000027679)	ANKRD34A (ENSCARG00000027668)	arhgef1b (ENSCARG00000026536)	ENSCARG00000026489	ENSCARG00000026479	MEGF8 (ENSCARG00000026382)	trim35-28 (ENSCARG00000026359)
Goldfish	MODERN SPECIES	35	ENSCARG00000033893	gdf6a (ENSCARG00000033885)	eny2 (ENSCARG00000033876)	TRHR (ENSCARG00000033866)	TMEM74 (ENSCARG00000033857)	emc2 (ENSCARG00000033776)	eif3ea (ENSCARG00000033600)	RSPO2 (ENSCARG00000033538)	cd83 (ENSCARG00000033521)	zgc:113232 (ENSCARG00000033124)	ENSCARG00000033102	gpd1l (ENSCARG00000033094)	OSBPL10 (ENSCARG00000033083)	stt3b (ENSCARG00000032969)	ZHX1 (ENSCARG00000032949)	washc5 (ENSCARG00000032812) #22	cldn12 (ENSCARG00000032790)	ADAM22 (ENSCARG00000029605)	dbf4 (ENSCARG00000029462)	slc25a40 (ENSCARG00000029404)	rundc3b (ENSCARG00000029352)	paqr7b (ENSCARG00000029348)	ENSCARG00000029308	ENSCARG00000029304	SERINC2 (ENSCARG00000029188)	HIVEP3 (ENSCARG00000029174)	ENSCARG00000029170	phactr4b (ENSCARG00000029136)	rcc1 (ENSCARG00000029048)	oprd1b (ENSCARG00000029035)	tcea3 (ENSCARG00000028868)
Cyprininae_a	ANCESTRAL SPECIES	117	ENSGT00530000063823.b.b.a.n	ENSGT00390000008074.a	ENSGT00940000155187.B.o.a	ENSGT00390000011759.e.a #23	ENSGT00940000158819.i	ENSGT00390000012014.A.f	ENSGT00390000008818.r.b	ENSGT00390000014996.g	ENSGT00550000074870.u.a.a	ENSGT00550000074694.a.k	ENSGT00950000182893.a.a.a.a.b.b	ENSGT00390000014996.h	ENSGT00550000074870.v	ENSGT00940000165417	ENSGT00950000182893.a.a.a.a.b.a	ENSGT00390000011137 #22	ENSGT00940000156889.h	ENSGT00400000022250.a	ENSGT00940000156889.g	ENSGT00530000063909.b.a	ENSGT00940000165993.a	ENSGT00940000159175.b	ENSGT00940000154870.A.a.b	ENSGT00390000013847.b	ENSGT01080000258118	ENSGT00400000025005.b	ENSGT00390000013847.a.a	ENSGT00950000182919.B.a.g.g	ENSGT00940000159283.c.b.a	ENSGT00950000183112.b.b.k	ENSGT00940000158522.l.e
Common carp reference	MODERN SPECIES	2	zgc:101716 (ENSCCRG00000046608)	dcaf13 (ENSCCRG00000046600)	ENSCCRG00000033866	DCSTAMP (ENSCCRG00000033882)	dpys (ENSCCRG00000054661)	zfpm2a (ENSCCRG00000032136)	ENSCCRG00000060104	ENSCCRG00000064321	sqlea (ENSCCRG00000080028) #23	rnf144b (ENSCCRG00000067640)	ENSCCRG00000056854	ccdc127a (ENSCCRG00000036189)	mrpl32 (ENSCCRG00000072577)	ENSCCRG00000062999	ENSCCRG00000079518	washc5 (ENSCCRG00000032857) #22	ADAM22 (ENSCCRG00000032895)	cldn12 (ENSCCRG00000078404)	dbf4 (ENSCCRG00000032869)	slc25a40 (ENSCCRG00000032868)	rundc3b (ENSCCRG00000032866)	ENSCCRG00000078128	nudt17 (ENSCCRG00000026545)	mtx1a (ENSCCRG00000016240)	thbs3a (ENSCCRG00000015651)	hjv (ENSCCRG00000071501)	txnipb (ENSCCRG00000060084)	polr3glb (ENSCCRG00000015567)	ANKRD34A (ENSCCRG00000053722)	ENSCCRG00000009798	ENSCCRG00000012175
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	584	dcaf13 (ENSSGRG00000052574)	RIMS2 (ENSSGRG00000052572)	DCSTAMP (ENSSGRG00000052570)	dpys (ENSSGRG00000052569)	zfpm2a (ENSSGRG00000052568)	ENSSGRG00000052567	OXR1 (ENSSGRG00000052566)	sqlea (ENSSGRG00000052538) #23	rnf144b (ENSSGRG00000052534)	ENSSGRG00000052533	ccdc127a (ENSSGRG00000052532)	mrpl32 (ENSSGRG00000052531)	ENSSGRG00000052486	ENSSGRG00000052460	ZHX1 (ENSSGRG00000052458)	washc5 (ENSSGRG00000052398) #22	cldn12 (ENSSGRG00000052395)	ADAM22 (ENSSGRG00000052370)
Golden-line barbel	MODERN SPECIES	152	dcaf13 (ENSSGRG00000048044)	RIMS2 (ENSSGRG00000048041)	DCSTAMP (ENSSGRG00000048040)	dpys (ENSSGRG00000048039)	zfpm2a (ENSSGRG00000048034)	ENSSGRG00000048031	OXR1 (ENSSGRG00000047984)	sqlea (ENSSGRG00000047969) #23	rnf144b (ENSSGRG00000047968)	ccdc127a (ENSSGRG00000047966)	ENSSGRG00000047965	mrpl32 (ENSSGRG00000047964)	psma2a (ENSSGRG00000047862)	ATAD2 (ENSSGRG00000047748)	ZHX1 (ENSSGRG00000047739)	washc5 (ENSSGRG00000047221) #22	cldn12 (ENSSGRG00000047203)	ADAM22 (ENSSGRG00000047197)	dbf4 (ENSSGRG00000047196)	slc25a40 (ENSSGRG00000047139)	rundc3b (ENSSGRG00000047088)	ENSSGRG00000047086	nudt17 (ENSSGRG00000047083)	mtx1a (ENSSGRG00000047081)	thbs3a (ENSSGRG00000047053)	hjv (ENSSGRG00000047051)	txnipb (ENSSGRG00000047050)	polr3glb (ENSSGRG00000047049)	ANKRD34A (ENSSGRG00000047048)	ENSSGRG00000047047	SLC4A7 (ENSSGRG00000047036)
Zebrafish	MODERN SPECIES	7	zgc:101716 (ENSDARG00000010738)	dcaf13 (ENSDARG00000002267)	RIMS2 (ENSDARG00000113702)	ENSDARG00000101606	dpys (ENSDARG00000079543)	zfpm2a (ENSDARG00000040123)	ENSDARG00000095821	ENSDARG00000100474	sqlea (ENSDARG00000079946) #23	rnf144b (ENSDARG00000024940)	ENSDARG00000113257	ccdc127a (ENSDARG00000104344)	mrpl32 (ENSDARG00000060489)	psma2a (ENSDARG00000040121)	ATAD2 (ENSDARG00000076590)	washc5 (ENSDARG00000101543) #22	cldn12 (ENSDARG00000003927)	ADAM22 (ENSDARG00000060532)	dbf4 (ENSDARG00000074796)	slc25a40 (ENSDARG00000015856)	rundc3b (ENSDARG00000009961)	ENSDARG00000077103	si:dkey-7j14.6 (ENSDARG00000090552)	si:dkey-7j14.5 (ENSDARG00000097528)	nudt17 (ENSDARG00000008014)	ENSDARG00000088189	mtx1a (ENSDARG00000025500)	thbs3a (ENSDARG00000077641)	hjv (ENSDARG00000030494)	txnipb (ENSDARG00000070000)	polr3glb (ENSDARG00000013734)
Clupeiformes	ANCESTRAL SPECIES	50	ENSGT00390000002970	ENSGT00390000013448.a.a	ENSGT00570000079239	ENSGT00390000014398	ENSGT00550000074870	ENSGT00390000014996	ENSGT00390000012014.A	ENSGT00940000158819	ENSGT00390000011759.e #23	ENSGT00390000008074	ENSGT00530000063823.b.b.a	ENSGT01030000234527.A.a.a.a	ENSGT00940000153269.b.b	ENSGT00940000155236	ENSGT00390000005711	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT00390000003465.b.b.b	ENSGT01090000260040.b.b.a.e	ENSGT00940000163304.j.a	ENSGT00390000003568	ENSGT01030000235814	ENSGT00950000182904.a.a.b	ENSGT00950000182952.E	ENSGT00390000010337.A	ENSGT01050000244883.A.a.b	ENSGT01020000230438.A	ENSGT00940000166443.d.b
Atlantic herring	MODERN SPECIES	2	apoc2 (ENSCHAG00000006934)	ENSCHAG00000006943	zgc:110410 (ENSCHAG00000006969)	ENSCHAG00000006983	ENSCHAG00000006998	rnf144b (ENSCHAG00000007025)	sqlea (ENSCHAG00000007170) #23	OXR1 (ENSCHAG00000008138)	ENSCHAG00000010453	zfpm2a (ENSCHAG00000010539)	dpys (ENSCHAG00000010552)	DCSTAMP (ENSCHAG00000010704)	RIMS2 (ENSCHAG00000010811)	ENSCHAG00000014526	dcaf13 (ENSCHAG00000014543)	washc5 (ENSCHAG00000014583) #22	nsmce2 (ENSCHAG00000014630)	LRATD2 (ENSCHAG00000014642) #19	KLHL38 (ENSCHAG00000014674)	fbxo32 (ENSCHAG00000014680)	PRELID3A (ENSCHAG00000014787)	ENSCHAG00000014790	ywhabl (ENSCHAG00000014810)	ENSCHAG00000014824	ENSCHAG00000014857	ENSCHAG00000014883	SMG9 (ENSCHAG00000014910)	ENSCHAG00000014977	ENSCHAG00000015011	ENSCHAG00000015152	ENSCHAG00000015191
Denticle herring	MODERN SPECIES	15	ZHX1 (ENSDCDG00000021857)	ENSDCDG00000021243	ENSDCDG00000021216	mrpl32 (ENSDCDG00000021212)	ccdc127a (ENSDCDG00000021211)	ENSDCDG00000021206	rnf144b (ENSDCDG00000021203)	sqlea (ENSDCDG00000021141) #23	OXR1 (ENSDCDG00000020942)	ENSDCDG00000020931	zfpm2a (ENSDCDG00000020929)	dpys (ENSDCDG00000020870)	DCSTAMP (ENSDCDG00000020860)	RIMS2 (ENSDCDG00000017230)	dcaf13 (ENSDCDG00000017147)	washc5 (ENSDCDG00000017127) #22	nsmce2 (ENSDCDG00000017125)	lratd2b (ENSDCDG00000017124) #19	fbxo32 (ENSDCDG00000017116)	PRELID3A (ENSDCDG00000017114)	ywhabl (ENSDCDG00000017112)	ENSDCDG00000017111	ENSDCDG00000017110	ENSDCDG00000017108	SMG9 (ENSDCDG00000017100)	ENSDCDG00000017079	ENSDCDG00000017067	ENSDCDG00000017065	ENSDCDG00000017060	cd79a (ENSDCDG00000017045)	ENSDCDG00000016913
Euteleosteomorpha	ANCESTRAL SPECIES	167	ENSGT00940000157880.g.a	ENSGT00940000155488.m.b	ENSGT00940000158391	ENSGT00940000157527.a	ENSGT00940000157131.b	ENSGT00560000077278.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00390000013961 #21	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Acanthomorphata	ANCESTRAL SPECIES	22	ENSGT00390000011559	ENSGT00940000166893	ENSGT00940000158255	ENSGT00630000089917	ENSGT00940000162418	ENSGT00940000159459	ENSGT00940000180503	ENSGT00940000160576	ENSGT00390000014107.a.b	ENSGT00940000153117.A	ENSGT00940000154655.a.i.b	ENSGT00940000160706	ENSGT00390000010887.a	ENSGT00940000155321.d.b	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00390000013961 #21	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b	ENSGT00940000155141.w.b
Euacanthomorphacea	ANCESTRAL SPECIES		ENSGT00390000011559	ENSGT00940000166893	ENSGT00940000158255	ENSGT00630000089917	ENSGT00940000162418	ENSGT00940000159459	ENSGT00940000180503	ENSGT00940000160576	ENSGT00390000014107.a.b	ENSGT00940000153117.A	ENSGT00940000154655.a.i.b	ENSGT00990000203789	ENSGT00940000160706	ENSGT00390000010887.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Percomorphaceae	ANCESTRAL SPECIES		ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Percomorphaceae_B	ANCESTRAL SPECIES	1	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Percomorphaceae_C	ANCESTRAL SPECIES	2	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Eupercaria	ANCESTRAL SPECIES	1	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Tetraodontidae	ANCESTRAL SPECIES	14	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00510000047616.b	ENSGT00940000155141.w.b
Fugu	MODERN SPECIES	19	ENSTRUG00000032932	cobl (ENSTRUG00000009979)	ENSTRUG00000009828	ddc (ENSTRUG00000009415)	entpd3 (ENSTRUG00000009318)	rbms3 (ENSTRUG00000021719)	azi2 (ENSTRUG00000026808)	cmc1 (ENSTRUG00000009107)	eomesb (ENSTRUG00000008966)	ANKIB1 (ENSTRUG00000008837)	ENSTRUG00000008793	CSMD3 (ENSTRUG00000010752)	eif3ha (ENSTRUG00000007425)	rad21a (ENSTRUG00000007006)	EXT1 (ENSTRUG00000006353)	washc5 (ENSTRUG00000005740) #22	nsmce2 (ENSTRUG00000019738)	LRATD2 (ENSTRUG00000005723) #19	KLHL38 (ENSTRUG00000005434)	fbxo32 (ENSTRUG00000005123)	PRELID3A (ENSTRUG00000004940)	elovl4a (ENSTRUG00000004612)	SOGA3 (ENSTRUG00000004481)	si:ch211-151o1.4 (ENSTRUG00000021928)	ECHDC1 (ENSTRUG00000004200)	RNF146 (ENSTRUG00000004167)	ENSTRUG00000030542	rspo3 (ENSTRUG00000003904)	trmt11 (ENSTRUG00000004275)	hint3 (ENSTRUG00000025297)	ENSTRUG00000004209
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	23	ENSTNIG00000019120	entpd3 (ENSTNIG00000019119)	rbms3 (ENSTNIG00000013819)	azi2 (ENSTNIG00000019118)	cmc1 (ENSTNIG00000019117)	eomesb (ENSTNIG00000019116)	ENSTNIG00000019115	zgc:110410 (ENSTNIG00000019114)	ENSTNIG00000019113	ENSTNIG00000001340	ENSTNIG00000001199	ENSTNIG00000019112	eif3ha (ENSTNIG00000019111)	rad21a (ENSTNIG00000019110)	EXT1 (ENSTNIG00000019109)	washc5 (ENSTNIG00000019108) #22	nsmce2 (ENSTNIG00000019107)	LRATD2 (ENSTNIG00000001207) #19	KLHL38 (ENSTNIG00000019106)	fbxo32 (ENSTNIG00000019105)	PRELID3A (ENSTNIG00000019104)	elovl4a (ENSTNIG00000002416)	SOGA3 (ENSTNIG00000019103)	ECHDC1 (ENSTNIG00000019102)	RNF146 (ENSTNIG00000019101)	mdh2 (ENSTNIG00000019100)	rspo3 (ENSTNIG00000019099)	trmt11 (ENSTNIG00000019098)	hint3 (ENSTNIG00000019097)	ENSTNIG00000019096	ENSTNIG00000019095
Tetraodon	MODERN SPECIES	26	pmpca (ENSTNIG00000019531)	ENSTNIG00000019443	sdcbp2 (ENSTNIG00000019837)	sdcbp2 (ENSTNIG00000001879)	ENSTNIG00000019586	ENSTNIG00000019674	ENSTNIG00000019727	SF3B1 (ENSTNIG00000019737)	ENSTNIG00000019826	ANKRD44 (ENSTNIG00000001878)	CNIH4 (ENSTNIG00000019651)	WDR26 (ENSTNIG00000019652)	ENSTNIG00000019653	CNIH4 (ENSTNIG00000019693)	WDR26 (ENSTNIG00000019694)	ENSTNIG00000019458 #22	ENSTNIG00000001880	prdx5 (ENSTNIG00000019675)	ENSTNIG00000019732	ENSTNIG00000019842	ENSTNIG00000019457	ENSTNIG00000019605	ENSTNIG00000019613	ENSTNIG00000019791	ENSTNIG00000019667	ENSTNIG00000019451	ENSTNIG00000019553	ENSTNIG00000019844	ENSTNIG00000019579	ENSTNIG00000019594	ENSTNIG00000019616
Eupecaria_A	ANCESTRAL SPECIES	2	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Ballan wrasse	MODERN SPECIES	3															ENSLBEG00000008231	washc5 (ENSLBEG00000008077) #22	nsmce2 (ENSLBEG00000008027)	LRATD2 (ENSLBEG00000008011) #19	KLHL38 (ENSLBEG00000007993)	fbxo32 (ENSLBEG00000007955)	PRELID3A (ENSLBEG00000007920)	elovl4a (ENSLBEG00000007879)	SOGA3 (ENSLBEG00000007866)	si:ch211-151o1.4 (ENSLBEG00000007801)	ECHDC1 (ENSLBEG00000007762)	RNF146 (ENSLBEG00000007754)	ENSLBEG00000007736	rspo3 (ENSLBEG00000007713)	trmt11 (ENSLBEG00000007644)	ENSLBEG00000007609	hint3 (ENSLBEG00000007591)
Eupecaria_B	ANCESTRAL SPECIES	4	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Eupecaria_C	ANCESTRAL SPECIES	2	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A.f	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	2	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A.f	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
European seabass	MODERN SPECIES	6	ENSDLAG00005024611	cobl (ENSDLAG00005019888)	ENSDLAG00005019972	ddc (ENSDLAG00005020771)	entpd3 (ENSDLAG00005020794)	RBMS3 (ENSDLAG00005020807)	azi2 (ENSDLAG00005020872)	ENSDLAG00005030140	eomesb (ENSDLAG00005020890)	ENSDLAG00005020899	ENSDLAG00005020946	ENSDLAG00005021022	EIF3H (ENSDLAG00005022625)	rad21a (ENSDLAG00005022661)	ENSDLAG00005022700	ENSDLAG00005022750 #22	ENSDLAG00005022778	ENSDLAG00005029363 #19	ENSDLAG00005022783	ENSDLAG00005034682	fbxo32 (ENSDLAG00005022792)	ENSDLAG00005022840	ENSDLAG00005022881	ECHDC1 (ENSDLAG00005032651)	RNF146 (ENSDLAG00005029439)	ENSDLAG00005022895	rspo3 (ENSDLAG00005028585)	trmt11 (ENSDLAG00005022910)	ENSDLAG00005029350	hint3 (ENSDLAG00005022922)	ENSDLAG00005034309
Large yellow croaker	MODERN SPECIES	484	ENSLCRG00005018584	cobl (ENSLCRG00005018600)	ENSLCRG00005018618	ddc (ENSLCRG00005018653)	entpd3 (ENSLCRG00005018721)	rbms3 (ENSLCRG00005018759)	azi2 (ENSLCRG00005019121)	cmc1 (ENSLCRG00005019130)	eomesb (ENSLCRG00005019138)	ANKIB1 (ENSLCRG00005019157)	ENSLCRG00005019224	CSMD3 (ENSLCRG00005019535)	eif3ha (ENSLCRG00005020093)	rad21a (ENSLCRG00005020160)	ext1a (ENSLCRG00005020185)	washc5 (ENSLCRG00005020264) #22	nsmce2 (ENSLCRG00005020294)	LRATD2 (ENSLCRG00005020317) #19	KLHL38 (ENSLCRG00005020320)	fbxo32 (ENSLCRG00005020327)	PRELID3A (ENSLCRG00005020337)	elovl4a (ENSLCRG00005020338)	SOGA3 (ENSLCRG00005020339)	si:ch211-151o1.4 (ENSLCRG00005020344)	ECHDC1 (ENSLCRG00005020350)	RNF146 (ENSLCRG00005020352)	mdh2 (ENSLCRG00005020353)	rspo3 (ENSLCRG00005020361)	trmt11 (ENSLCRG00005020374)	ENSLCRG00005020380	hint3 (ENSLCRG00005020382)
Gilthead seabream	MODERN SPECIES	8	ENSSAUG00010020297	ddc (ENSSAUG00010020250)	ENSSAUG00010020249	entpd3 (ENSSAUG00010020245)	rbms3 (ENSSAUG00010020213)	azi2 (ENSSAUG00010020210)	cmc1 (ENSSAUG00010020208)	eomesb (ENSSAUG00010020207)	ANKIB1 (ENSSAUG00010020192)	zgc:110410 (ENSSAUG00010020186)	CSMD3 (ENSSAUG00010019552)	CCR8 (ENSSAUG00010019497)	eif3ha (ENSSAUG00010019415)	rad21a (ENSSAUG00010019378)	ext1a (ENSSAUG00010019316)	washc5 (ENSSAUG00010019290) #22	LRATD2 (ENSSAUG00010019285) #19	KLHL38 (ENSSAUG00010019281)	fbxo32 (ENSSAUG00010019247)	PRELID3A (ENSSAUG00010019245)	elovl4a (ENSSAUG00010019243)	SOGA3 (ENSSAUG00010019242)	si:ch211-151o1.4 (ENSSAUG00010019240)	ECHDC1 (ENSSAUG00010019237)	RNF146 (ENSSAUG00010019236)	mdh2 (ENSSAUG00010019235)	rspo3 (ENSSAUG00010019232)	trmt11 (ENSSAUG00010018981)	ENSSAUG00010018969	hint3 (ENSSAUG00010018967)	ENSSAUG00010018965
Perciformes	ANCESTRAL SPECIES	3	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Cottioidei	ANCESTRAL SPECIES	7	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00650000094686	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Lumpfish	MODERN SPECIES	7	ddc (ENSCLMG00005009330)	ddc (ENSCLMG00005006173)	ENSCLMG00005006164	entpd3 (ENSCLMG00005006162)	rbms3 (ENSCLMG00005006160)	azi2 (ENSCLMG00005006159)	cmc1 (ENSCLMG00005006158)	eomesb (ENSCLMG00005006084)	ANKIB1 (ENSCLMG00005006062)	zgc:110410 (ENSCLMG00005006061)	CSMD3 (ENSCLMG00005006057)	ENSCLMG00005006055	eif3ha (ENSCLMG00005006045)	rad21a (ENSCLMG00005006041)	ext1a (ENSCLMG00005006036)	washc5 (ENSCLMG00005006020) #22	nsmce2 (ENSCLMG00005006016)	LRATD2 (ENSCLMG00005006015) #19	KLHL38 (ENSCLMG00005006013)	fbxo32 (ENSCLMG00005005941)	PRELID3A (ENSCLMG00005005939)	elovl4a (ENSCLMG00005005936)	SOGA3 (ENSCLMG00005005932)	ENSCLMG00005005923	ECHDC1 (ENSCLMG00005005921)	RNF146 (ENSCLMG00005005920)	mdh2 (ENSCLMG00005005919)	rspo3 (ENSCLMG00005005880)	ENSCLMG00005005875	trmt11 (ENSCLMG00005005808)	ENSCLMG00005005804
Stickleback	MODERN SPECIES	19	cobl (ENSGACG00000006446)	ENSGACG00000006438	ddc (ENSGACG00000006397)	entpd3 (ENSGACG00000006387)	rbms3 (ENSGACG00000006377)	azi2 (ENSGACG00000006371)	cmc1 (ENSGACG00000006355)	eomesb (ENSGACG00000006345)	ANKIB1 (ENSGACG00000006337)	zgc:110410 (ENSGACG00000006328)	CSMD3 (ENSGACG00000006307)	ENSGACG00000006303	eif3ha (ENSGACG00000006293)	rad21a (ENSGACG00000006276)	ext1a (ENSGACG00000006234)	washc5 (ENSGACG00000006206) #22	nsmce2 (ENSGACG00000006200)	LRATD2 (ENSGACG00000006198) #19	KLHL38 (ENSGACG00000006167)	fbxo32 (ENSGACG00000006161)	PRELID3A (ENSGACG00000006144)	elovl4a (ENSGACG00000006127)	SOGA3 (ENSGACG00000006121)	ENSGACG00000006118	ECHDC1 (ENSGACG00000006095)	RNF146 (ENSGACG00000006092)	mdh2 (ENSGACG00000006087)	rspo3 (ENSGACG00000006080)	trmt11 (ENSGACG00000006060)	ENSGACG00000006051	ENSGACG00000006045
Perciformes_a	ANCESTRAL SPECIES	3	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Channel bull blenny	MODERN SPECIES	7	ENSCGOG00000019400	ENSCGOG00000019403	ENSCGOG00000019411	ddc (ENSCGOG00000019524)	entpd3 (ENSCGOG00000019643)	rbms3 (ENSCGOG00000019662)	azi2 (ENSCGOG00000020909)	cmc1 (ENSCGOG00000020914)	eomesb (ENSCGOG00000020919)	ANKIB1 (ENSCGOG00000020947)	zgc:110410 (ENSCGOG00000021087)	CSMD3 (ENSCGOG00000021106)	eif3ha (ENSCGOG00000001619)	rad21a (ENSCGOG00000001776)	EXT1 (ENSCGOG00000001921)	washc5 (ENSCGOG00000002130) #22	nsmce2 (ENSCGOG00000002169)	LRATD2 (ENSCGOG00000002176) #19	KLHL38 (ENSCGOG00000002177)	fbxo32 (ENSCGOG00000002180)	PRELID3A (ENSCGOG00000002182)	elovl4a (ENSCGOG00000002187)	SOGA3 (ENSCGOG00000002203)	si:ch211-151o1.4 (ENSCGOG00000002206)	ECHDC1 (ENSCGOG00000002208)	RNF146 (ENSCGOG00000002211)	rspo3 (ENSCGOG00000002215)	trmt11 (ENSCGOG00000002240)	ENSCGOG00000002276	hint3 (ENSCGOG00000002278)	ENSCGOG00000002279
Pike perch	MODERN SPECIES	49	cobl (ENSSLUG00000011482)	GRB10 (ENSSLUG00000011616)	ddc (ENSSLUG00000013993)	entpd3 (ENSSLUG00000014212)	rbms3 (ENSSLUG00000014382)	ENSSLUG00000015868	azi2 (ENSSLUG00000015874)	cmc1 (ENSSLUG00000015880)	eomesb (ENSSLUG00000015885)	ANKIB1 (ENSSLUG00000015920)	zgc:110410 (ENSSLUG00000016086)	CSMD3 (ENSSLUG00000016144)	eif3ha (ENSSLUG00000016371)	rad21a (ENSSLUG00000016439)	EXT1 (ENSSLUG00000016519)	washc5 (ENSSLUG00000016557) #22	nsmce2 (ENSSLUG00000016608)	LRATD2 (ENSSLUG00000016615) #19	KLHL38 (ENSSLUG00000016619)	fbxo32 (ENSSLUG00000016634)	PRELID3A (ENSSLUG00000016673)	elovl4a (ENSSLUG00000016678)	SOGA3 (ENSSLUG00000016686)	ECHDC1 (ENSSLUG00000016702)	RNF146 (ENSSLUG00000016706)	mdh2 (ENSSLUG00000016709)	rspo3 (ENSSLUG00000016716)	trmt11 (ENSSLUG00000016722)	ENSSLUG00000016734	hint3 (ENSSLUG00000016738)	ENSSLUG00000016742
Percomorphaceae_D	ANCESTRAL SPECIES	2	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Carangaria	ANCESTRAL SPECIES	1	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Carangaria_A	ANCESTRAL SPECIES	9	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00650000094686	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Seriola	ANCESTRAL SPECIES	16	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00650000094686	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Greater amberjack	MODERN SPECIES	75	ENSSDUG00000013869	cobl (ENSSDUG00000013828)	ENSSDUG00000013788	ddc (ENSSDUG00000013766)	entpd3 (ENSSDUG00000013701)	rbms3 (ENSSDUG00000013656)	azi2 (ENSSDUG00000013637)	cmc1 (ENSSDUG00000013626)	eomesb (ENSSDUG00000013615)	ANKIB1 (ENSSDUG00000013545)	zgc:110410 (ENSSDUG00000013516)	CSMD3 (ENSSDUG00000013040)	eif3ha (ENSSDUG00000012977)	rad21a (ENSSDUG00000012934)	EXT1 (ENSSDUG00000012893)	washc5 (ENSSDUG00000012784) #22	nsmce2 (ENSSDUG00000012748)	LRATD2 (ENSSDUG00000012742) #19	KLHL38 (ENSSDUG00000012722)	fbxo32 (ENSSDUG00000012689)	ENSSDUG00000012639	elovl4a (ENSSDUG00000012608)	SOGA3 (ENSSDUG00000012566)	ENSSDUG00000012537	ECHDC1 (ENSSDUG00000012521)	RNF146 (ENSSDUG00000012512)	mdh2 (ENSSDUG00000012505)	rspo3 (ENSSDUG00000012488)	trmt11 (ENSSDUG00000012463)	ENSSDUG00000012448	hint3 (ENSSDUG00000012433)
Yellowtail amberjack	MODERN SPECIES	2851														rad21a (ENSSLDG00000015139)	EXT1 (ENSSLDG00000015095)	washc5 (ENSSLDG00000014954) #22	nsmce2 (ENSSLDG00000014749)	LRATD2 (ENSSLDG00000014702) #19	KLHL38 (ENSSLDG00000014691)	fbxo32 (ENSSLDG00000014668)	ENSSLDG00000014637	elovl4a (ENSSLDG00000014617)	SOGA3 (ENSSLDG00000014562)	ENSSLDG00000014539	ECHDC1 (ENSSLDG00000014521)	RNF146 (ENSSLDG00000014513)	mdh2 (ENSSLDG00000014478)	rspo3 (ENSSLDG00000014461)	trmt11 (ENSSLDG00000014435)	ENSSLDG00000014426	hint3 (ENSSLDG00000014408)
Barramundi perch	MODERN SPECIES	17	CCR8 (ENSLCAG00010018113)	CX3CR1 (ENSLCAG00010018112)	GRB10 (ENSLCAG00010017924)	ddc (ENSLCAG00010017860)	entpd3 (ENSLCAG00010017839)	rbms3 (ENSLCAG00010017816)	azi2 (ENSLCAG00010017800)	cmc1 (ENSLCAG00010017793)	eomesb (ENSLCAG00010017790)	ANKIB1 (ENSLCAG00010017775)	zgc:110410 (ENSLCAG00010017768)	CSMD3 (ENSLCAG00010017634)	eif3ha (ENSLCAG00010017517)	rad21a (ENSLCAG00010017501)	EXT1 (ENSLCAG00010017391)	washc5 (ENSLCAG00010017347) #22	nsmce2 (ENSLCAG00010017321)	LRATD2 (ENSLCAG00010017319) #19	KLHL38 (ENSLCAG00010017318)	fbxo32 (ENSLCAG00010017311)	ENSLCAG00010017307	elovl4a (ENSLCAG00010017304)	SOGA3 (ENSLCAG00010017302)	ENSLCAG00010017300	ECHDC1 (ENSLCAG00010017299)	RNF146 (ENSLCAG00010017296)	ENSLCAG00010017294	rspo3 (ENSLCAG00010017293)	trmt11 (ENSLCAG00010017272)	ENSLCAG00010017250	hint3 (ENSLCAG00010017248)
Pleuronectoidei	ANCESTRAL SPECIES	3	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Turbot	MODERN SPECIES		ENSSMAG00000004713	cobl (ENSSMAG00000004725)	ENSSMAG00000004849	ddc (ENSSMAG00000022350)	entpd3 (ENSSMAG00000004976)	RBMS3 (ENSSMAG00000004997)	azi2 (ENSSMAG00000005187)	ENSSMAG00000022104	eomesb (ENSSMAG00000005213)	ENSSMAG00000005243	ENSSMAG00000005274	ENSSMAG00000005310	EIF3H (ENSSMAG00000005859)	rad21a (ENSSMAG00000005889)	ENSSMAG00000005930	ENSSMAG00000006009 #22	ENSSMAG00000006161	ENSSMAG00000006176 #19	ENSSMAG00000006182	ENSSMAG00000006193	ENSSMAG00000006240	elovl4a (ENSSMAG00000028158)	SOGA3 (ENSSMAG00000006286)	si:ch211-151o1.4 (ENSSMAG00000006313)	ECHDC1 (ENSSMAG00000006364)	RNF146 (ENSSMAG00000006377)	rspo3 (ENSSMAG00000006386)	trmt11 (ENSSMAG00000006405)	ENSSMAG00000006507	hint3 (ENSSMAG00000028956)	ENSSMAG00000031528
Tongue sole	MODERN SPECIES	4	rnf144b (ENSCSEG00000010265)	sqlea (ENSCSEG00000010244) #23	oxr1b (ENSCSEG00000010186)	ENSCSEG00000010131	zfpm2a (ENSCSEG00000010109)	rbms3 (ENSCSEG00000010011)	azi2 (ENSCSEG00000009968)	cmc1 (ENSCSEG00000009952)	eomesb (ENSCSEG00000009943)	ANKIB1 (ENSCSEG00000009906)	zgc:110410 (ENSCSEG00000009872)	CSMD3 (ENSCSEG00000009440)	eif3ha (ENSCSEG00000009383)	rad21a (ENSCSEG00000009353)	EXT1 (ENSCSEG00000009335)	washc5 (ENSCSEG00000009283) #22	ENSCSEG00000009271 #21	LRATD2 (ENSCSEG00000009266) #19	KLHL38 (ENSCSEG00000009264)	PRELID3A (ENSCSEG00000009240)	fbxo32 (ENSCSEG00000009213)	elovl4a (ENSCSEG00000009197)	ENSCSEG00000009167	si:ch211-151o1.4 (ENSCSEG00000009134)	ECHDC1 (ENSCSEG00000009117)	RNF146 (ENSCSEG00000009114)	mdh2 (ENSCSEG00000009113)	rspo3 (ENSCSEG00000009102)	trmt11 (ENSCSEG00000009069)	ENSCSEG00000009056	hint3 (ENSCSEG00000009051)
Anabantaria	ANCESTRAL SPECIES	2	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Zig-zag eel	MODERN SPECIES	7	cobl (ENSMAMG00000024039)	ENSMAMG00000024040	ddc (ENSMAMG00000024041)	entpd3 (ENSMAMG00000024042)	RBMS3 (ENSMAMG00000024043)	azi2 (ENSMAMG00000024044)	ENSMAMG00000024045	eomesb (ENSMAMG00000024046)	ENSMAMG00000024047	ENSMAMG00000024048	ENSMAMG00000024049	ENSMAMG00000026923	EIF3H (ENSMAMG00000024050)	rad21a (ENSMAMG00000024051)	ENSMAMG00000024052	ENSMAMG00000024053 #22	ENSMAMG00000024054	ENSMAMG00000024055 #19	ENSMAMG00000024056	ENSMAMG00000024057	ENSMAMG00000024058	elovl4a (ENSMAMG00000024059)	SOGA3 (ENSMAMG00000024060)	si:ch211-151o1.4 (ENSMAMG00000024061)	ECHDC1 (ENSMAMG00000024062)	RNF146 (ENSMAMG00000024063)	ENSMAMG00000025817	rspo3 (ENSMAMG00000024065)	trmt11 (ENSMAMG00000024066)	ENSMAMG00000024263	hint3 (ENSMAMG00000025035)
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Climbing perch	MODERN SPECIES	7	ENSATEG00000030154	cobl (ENSATEG00000024278)	ENSATEG00000024287	ddc (ENSATEG00000024290)	entpd3 (ENSATEG00000024293)	RBMS3 (ENSATEG00000024295)	azi2 (ENSATEG00000024302)	ENSATEG00000024305	eomesb (ENSATEG00000024308)	ENSATEG00000024313	ENSATEG00000024317	ENSATEG00000024322	EIF3H (ENSATEG00000024324)	rad21a (ENSATEG00000024329)	ENSATEG00000024332	ENSATEG00000024339 #22	ENSATEG00000029469	ENSATEG00000024344 #19	ENSATEG00000024347	ENSATEG00000024349	ENSATEG00000024351	ELOVL4 (ENSATEG00000027049)	SOGA3 (ENSATEG00000024353)	si:ch211-151o1.4 (ENSATEG00000024356)	ECHDC1 (ENSATEG00000024358)	RNF146 (ENSATEG00000024360)	ENSATEG00000029395	rspo3 (ENSATEG00000024363)	trmt11 (ENSATEG00000024365)	ENSATEG00000027433	hint3 (ENSATEG00000024372)
Siamese fighting fish	MODERN SPECIES	7	ENSBSLG00000021087	cobl (ENSBSLG00000021140)	GRB10 (ENSBSLG00000021356)	ddc (ENSBSLG00000022416)	entpd3 (ENSBSLG00000022804)	rbms3 (ENSBSLG00000022849)	azi2 (ENSBSLG00000022908)	cmc1 (ENSBSLG00000022927)	eomesb (ENSBSLG00000022981)	ANKIB1 (ENSBSLG00000023099)	zgc:110410 (ENSBSLG00000023149)	CSMD3 (ENSBSLG00000023305)	eif3ha (ENSBSLG00000024341)	rad21a (ENSBSLG00000024342)	ext1a (ENSBSLG00000024346)	washc5 (ENSBSLG00000024372) #22	nsmce2 (ENSBSLG00000024386)	LRATD2 (ENSBSLG00000024389) #19	KLHL38 (ENSBSLG00000024408)	fbxo32 (ENSBSLG00000024444)	PRELID3A (ENSBSLG00000024543)	elovl4a (ENSBSLG00000024558)	SOGA3 (ENSBSLG00000024578)	ENSBSLG00000024598	ECHDC1 (ENSBSLG00000024600)	RNF146 (ENSBSLG00000024603)	mdh2 (ENSBSLG00000024605)	rspo3 (ENSBSLG00000024607)	trmt11 (ENSBSLG00000024732)	ENSBSLG00000024752	hint3 (ENSBSLG00000024760)
Ovalentaria	ANCESTRAL SPECIES	3	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Ovalentaria_B	ANCESTRAL SPECIES	1	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000166312.b.b	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Pomacentridae	ANCESTRAL SPECIES	23	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000166312.b.b	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Pomacentridae_A	ANCESTRAL SPECIES	6	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000166312.b.b	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Amphiprion	ANCESTRAL SPECIES	54	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00510000047616.b	ENSGT00940000155141.w.b
Orange clownfish	MODERN SPECIES	21	ENSAPEG00000016049	cobl (ENSAPEG00000016068)	GRB10 (ENSAPEG00000016152)	ddc (ENSAPEG00000016234)	entpd3 (ENSAPEG00000016291)	rbms3 (ENSAPEG00000016299)	azi2 (ENSAPEG00000016346)	cmc1 (ENSAPEG00000016367)	eomesb (ENSAPEG00000016400)	ANKIB1 (ENSAPEG00000016448)	zgc:110410 (ENSAPEG00000016550)	CSMD3 (ENSAPEG00000016613)	eif3ha (ENSAPEG00000016836)	rad21a (ENSAPEG00000016864)	EXT1 (ENSAPEG00000016915)	washc5 (ENSAPEG00000016976) #22	nsmce2 (ENSAPEG00000017070)	LRATD2 (ENSAPEG00000017075) #19	KLHL38 (ENSAPEG00000017086)	fbxo32 (ENSAPEG00000017103)	PRELID3A (ENSAPEG00000017136)	elovl4a (ENSAPEG00000017155)	SOGA3 (ENSAPEG00000017205)	si:ch211-151o1.4 (ENSAPEG00000017275)	ECHDC1 (ENSAPEG00000017331)	RNF146 (ENSAPEG00000017342)	mdh2 (ENSAPEG00000017362)	rspo3 (ENSAPEG00000017379)	trmt11 (ENSAPEG00000017412)	hint3 (ENSAPEG00000017427)	ENSAPEG00000017473
Clown anemonefish	MODERN SPECIES	571					entpd3 (ENSAOCG00000021295)	rbms3 (ENSAOCG00000021274)	azi2 (ENSAOCG00000021225)	cmc1 (ENSAOCG00000021205)	eomesb (ENSAOCG00000001552)	ANKIB1 (ENSAOCG00000021147)	zgc:110410 (ENSAOCG00000021037)	CSMD3 (ENSAOCG00000020971)	eif3ha (ENSAOCG00000020691)	rad21a (ENSAOCG00000020680)	EXT1 (ENSAOCG00000020625)	washc5 (ENSAOCG00000020560) #22	nsmce2 (ENSAOCG00000020458)	LRATD2 (ENSAOCG00000001511) #19	KLHL38 (ENSAOCG00000020436)	fbxo32 (ENSAOCG00000001507)	PRELID3A (ENSAOCG00000020402)	elovl4a (ENSAOCG00000020377)	SOGA3 (ENSAOCG00000020346)	si:ch211-151o1.4 (ENSAOCG00000020267)	ECHDC1 (ENSAOCG00000020235)	RNF146 (ENSAOCG00000020221)	mdh2 (ENSAOCG00000020214)	rspo3 (ENSAOCG00000020155)	trmt11 (ENSAOCG00000020121)	hint3 (ENSAOCG00000020040)	ENSAOCG00000020013
Spiny chromis	MODERN SPECIES	85								ENSAPOG00000011581	ENSAPOG00000011547	ENSAPOG00000011523	ENSAPOG00000011495	ENSAPOG00000011464	eif3ha (ENSAPOG00000011445)	rad21a (ENSAPOG00000011402)	EXT1 (ENSAPOG00000011356)	washc5 (ENSAPOG00000011244) #22	nsmce2 (ENSAPOG00000011130)	LRATD2 (ENSAPOG00000011098) #19	KLHL38 (ENSAPOG00000011076)	fbxo32 (ENSAPOG00000011055)	PRELID3A (ENSAPOG00000010993)	elovl4a (ENSAPOG00000010953)	SOGA3 (ENSAPOG00000010929)	ENSAPOG00000010917	ECHDC1 (ENSAPOG00000010911)	RNF146 (ENSAPOG00000010899)	ENSAPOG00000010893	rspo3 (ENSAPOG00000010844)	ENSAPOG00000010764	trmt11 (ENSAPOG00000010741)	ENSAPOG00000000298
Bicolor damselfish	MODERN SPECIES	321		azi2 (ENSSPAG00000000460)	cmc1 (ENSSPAG00000000443)	eomesb (ENSSPAG00000000410)	ENSSPAG00000000399	ANKIB1 (ENSSPAG00000000300)	zgc:110410 (ENSSPAG00000000245)	ENSSPAG00000000210	ENSSPAG00000000188	ENSSPAG00000000143	ENSSPAG00000022016	ENSSPAG00000022011	eif3ha (ENSSPAG00000022002)	rad21a (ENSSPAG00000021985)	ext1a (ENSSPAG00000021966)	washc5 (ENSSPAG00000021904) #22	nsmce2 (ENSSPAG00000021883)	LRATD2 (ENSSPAG00000021878) #19	KLHL38 (ENSSPAG00000021873)	fbxo32 (ENSSPAG00000021851)	PRELID3A (ENSSPAG00000021831)	elovl4a (ENSSPAG00000021820)	SOGA3 (ENSSPAG00000021793)	si:ch211-151o1.4 (ENSSPAG00000021779)	ECHDC1 (ENSSPAG00000021770)	RNF146 (ENSSPAG00000021755)	mdh2 (ENSSPAG00000021745)	rspo3 (ENSSPAG00000021718)	trmt11 (ENSSPAG00000021676)	ENSSPAG00000021665	hint3 (ENSSPAG00000021654)
Cichlidae	ANCESTRAL SPECIES	26	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000164318	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	2	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000164318	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	1	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000164318	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Haplochromini	ANCESTRAL SPECIES	24	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000164318	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Burton s mouthbrooder	MODERN SPECIES	688												ENSHBUG00000012620	eif3ha (ENSHBUG00000012604)	rad21a (ENSHBUG00000000359)	ext1a (ENSHBUG00000012541)	washc5 (ENSHBUG00000012499) #22	nsmce2 (ENSHBUG00000012439)	LRATD2 (ENSHBUG00000012428) #19	KLHL38 (ENSHBUG00000012415)	fbxo32 (ENSHBUG00000012405)	PRELID3A (ENSHBUG00000012351)	elovl4a (ENSHBUG00000012321)	SOGA3 (ENSHBUG00000012305)	si:ch211-151o1.4 (ENSHBUG00000012287)	ECHDC1 (ENSHBUG00000012233)	RNF146 (ENSHBUG00000012224)	mdh2 (ENSHBUG00000012222)	rspo3 (ENSHBUG00000012205)	trmt11 (ENSHBUG00000012185)	hint3 (ENSHBUG00000012125)	ENSHBUG00000012122
Haplochromini_A	ANCESTRAL SPECIES	30	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00940000164318	ENSGT00940000178092	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00510000047616.b	ENSGT00940000165475
P. nyererei	MODERN SPECIES	423	ddc (ENSPNYG00000010436)	entpd3 (ENSPNYG00000010496)	rbms3 (ENSPNYG00000010546)	azi2 (ENSPNYG00000010601)	cmc1 (ENSPNYG00000010618)	eomesb (ENSPNYG00000010661)	ANKIB1 (ENSPNYG00000010774)	zgc:110410 (ENSPNYG00000010849)	ENSPNYG00000010920	ENSPNYG00000010951	ENSPNYG00000010974	ENSPNYG00000010989	eif3ha (ENSPNYG00000011003)	rad21a (ENSPNYG00000011022)	ext1a (ENSPNYG00000011069)	washc5 (ENSPNYG00000011107) #22	nsmce2 (ENSPNYG00000011204)	LRATD2 (ENSPNYG00000011211) #19	KLHL38 (ENSPNYG00000011227)	fbxo32 (ENSPNYG00000011249)	PRELID3A (ENSPNYG00000011287)	elovl4a (ENSPNYG00000011302)	SOGA3 (ENSPNYG00000011320)	si:ch211-151o1.4 (ENSPNYG00000011371)	ECHDC1 (ENSPNYG00000011417)	RNF146 (ENSPNYG00000011429)	mdh2 (ENSPNYG00000011440)	rspo3 (ENSPNYG00000011451)	trmt11 (ENSPNYG00000011467)	ENSPNYG00000011523	hint3 (ENSPNYG00000011545)
Haplochromini_B	ANCESTRAL SPECIES	42	ENSGT01020000230359.A.f.b	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00510000047616.b	ENSGT00940000165475
Eastern happy	MODERN SPECIES	2	cobl (ENSACLG00000018200)	GRB10 (ENSACLG00000018362)	ddc (ENSACLG00000018439)	entpd3 (ENSACLG00000018484)	ENSACLG00000018498	rbms3 (ENSACLG00000018506)	azi2 (ENSACLG00000018639)	cmc1 (ENSACLG00000018644)	eomesb (ENSACLG00000018668)	ANKIB1 (ENSACLG00000018691)	zgc:110410 (ENSACLG00000018809)	CSMD3 (ENSACLG00000018907)	eif3ha (ENSACLG00000019101)	rad21a (ENSACLG00000019108)	ext1a (ENSACLG00000019134)	washc5 (ENSACLG00000019172) #22	nsmce2 (ENSACLG00000019257)	LRATD2 (ENSACLG00000019280) #19	KLHL38 (ENSACLG00000019296)	fbxo32 (ENSACLG00000019338)	PRELID3A (ENSACLG00000019370)	elovl4a (ENSACLG00000019414)	ENSACLG00000019432	SOGA3 (ENSACLG00000019435)	si:ch211-151o1.4 (ENSACLG00000019460)	ECHDC1 (ENSACLG00000019526)	RNF146 (ENSACLG00000019559)	mdh2 (ENSACLG00000019570)	rspo3 (ENSACLG00000019603)	trmt11 (ENSACLG00000019724)	hint3 (ENSACLG00000019808)
Zebra mbuna	MODERN SPECIES	1093	ENSMZEG00005006537	cobl (ENSMZEG00005006497)	GRB10 (ENSMZEG00005006436)	ddc (ENSMZEG00005006385)	entpd3 (ENSMZEG00005006363)	rbms3 (ENSMZEG00005006308)	azi2 (ENSMZEG00005006290)	cmc1 (ENSMZEG00005006280)	eomesb (ENSMZEG00005006266)	ANKIB1 (ENSMZEG00005006203)	zgc:110410 (ENSMZEG00005006152)	CSMD3 (ENSMZEG00005006026)	eif3ha (ENSMZEG00005005984)	rad21a (ENSMZEG00005005942)	ext1a (ENSMZEG00005005908)	washc5 (ENSMZEG00005005853) #22	nsmce2 (ENSMZEG00005005832)	LRATD2 (ENSMZEG00005005824) #19	KLHL38 (ENSMZEG00005005813)	fbxo32 (ENSMZEG00005005798)	PRELID3A (ENSMZEG00005005772)	elovl4a (ENSMZEG00005005756)	SOGA3 (ENSMZEG00005005740)	si:ch211-151o1.4 (ENSMZEG00005005709)	ECHDC1 (ENSMZEG00005005690)	RNF146 (ENSMZEG00005005682)	mdh2 (ENSMZEG00005005675)	rspo3 (ENSMZEG00005005669)	ENSMZEG00005005658	sult2st3 (ENSMZEG00005003158)	ENSMZEG00005003052
Lyretail cichlid	MODERN SPECIES	324							azi2 (ENSNBRG00000011297)	cmc1 (ENSNBRG00000011269)	eomesb (ENSNBRG00000011108)	ANKIB1 (ENSNBRG00000011041)	zgc:110410 (ENSNBRG00000010971)	CSMD3 (ENSNBRG00000010812)	eif3ha (ENSNBRG00000010765)	rad21a (ENSNBRG00000010705)	ext1a (ENSNBRG00000010671)	washc5 (ENSNBRG00000010601) #22	nsmce2 (ENSNBRG00000010583)	LRATD2 (ENSNBRG00000010567) #19	KLHL38 (ENSNBRG00000010554)	fbxo32 (ENSNBRG00000010515)	PRELID3A (ENSNBRG00000010492)	elovl4a (ENSNBRG00000010472)	SOGA3 (ENSNBRG00000010430)	si:ch211-151o1.4 (ENSNBRG00000010394)	ECHDC1 (ENSNBRG00000010371)	RNF146 (ENSNBRG00000010361)	mdh2 (ENSNBRG00000010348)	rspo3 (ENSNBRG00000010327)	trmt11 (ENSNBRG00000010249)	ENSNBRG00000010229	hint3 (ENSNBRG00000010219)
Nile tilapia	MODERN SPECIES	2	ENSONIG00000040604	cobl (ENSONIG00000007157)	GRB10 (ENSONIG00000007158)	ddc (ENSONIG00000007162)	entpd3 (ENSONIG00000007165)	rbms3 (ENSONIG00000007172)	azi2 (ENSONIG00000007179)	cmc1 (ENSONIG00000033868)	eomesb (ENSONIG00000007180)	ANKIB1 (ENSONIG00000007181)	zgc:110410 (ENSONIG00000007184)	CSMD3 (ENSONIG00000007185)	eif3ha (ENSONIG00000043185)	rad21a (ENSONIG00000007192)	ext1a (ENSONIG00000013536)	washc5 (ENSONIG00000007201) #22	nsmce2 (ENSONIG00000007205)	LRATD2 (ENSONIG00000020749) #19	KLHL38 (ENSONIG00000007206)	fbxo32 (ENSONIG00000007208)	PRELID3A (ENSONIG00000035852)	elovl4a (ENSONIG00000007212)	SOGA3 (ENSONIG00000007213)	si:ch211-151o1.4 (ENSONIG00000030490)	ECHDC1 (ENSONIG00000007214)	RNF146 (ENSONIG00000020750)	mdh2 (ENSONIG00000020751)	rspo3 (ENSONIG00000007215)	trmt11 (ENSONIG00000007218)	ENSONIG00000037359	hint3 (ENSONIG00000038027)
Midas cichlid	MODERN SPECIES	840		ENSACIG00000021346	GRB10 (ENSACIG00000021304)	ddc (ENSACIG00000021266)	entpd3 (ENSACIG00000021171)	rbms3 (ENSACIG00000021113)	azi2 (ENSACIG00000021090)	cmc1 (ENSACIG00000021087)	eomesb (ENSACIG00000021014)	ANKIB1 (ENSACIG00000020979)	zgc:110410 (ENSACIG00000020959)	CSMD3 (ENSACIG00000020834)	eif3ha (ENSACIG00000020799)	rad21a (ENSACIG00000020775)	ext1a (ENSACIG00000020550)	washc5 (ENSACIG00000020503) #22	nsmce2 (ENSACIG00000020431)	LRATD2 (ENSACIG00000020420) #19	KLHL38 (ENSACIG00000020410)	fbxo32 (ENSACIG00000020384)	PRELID3A (ENSACIG00000020372)	PRELID3A (ENSACIG00000020366)	elovl4a (ENSACIG00000020352)	SOGA3 (ENSACIG00000020324)	ENSACIG00000020312	ECHDC1 (ENSACIG00000020303)	RNF146 (ENSACIG00000020294)	mdh2 (ENSACIG00000020263)	rspo3 (ENSACIG00000020235)	trmt11 (ENSACIG00000020205)	ENSACIG00000020199
Atherinomorphae	ANCESTRAL SPECIES		ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Cyprinodontiformes	ANCESTRAL SPECIES		ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Aplocheiloidei	ANCESTRAL SPECIES	26	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Mangrove rivulus	MODERN SPECIES	14	CCR8 (ENSKMAG00000020303)	ENSKMAG00000020309	ENSKMAG00000020324	GRB10 (ENSKMAG00000020363)	ddc (ENSKMAG00000020433)	entpd3 (ENSKMAG00000020472)	rbms3 (ENSKMAG00000020500)	azi2 (ENSKMAG00000020524)	cmc1 (ENSKMAG00000020538)	eomesb (ENSKMAG00000020587)	ANKIB1 (ENSKMAG00000020607)	CSMD3 (ENSKMAG00000020709)	eif3ha (ENSKMAG00000020890)	rad21a (ENSKMAG00000020919)	ext1a (ENSKMAG00000020945)	washc5 (ENSKMAG00000020988) #22	ENSKMAG00000021066 #21	LRATD2 (ENSKMAG00000021076) #19	KLHL38 (ENSKMAG00000021085)	fbxo32 (ENSKMAG00000021091)	PRELID3A (ENSKMAG00000021117)	elovl4a (ENSKMAG00000021127)	SOGA3 (ENSKMAG00000021137)	ENSKMAG00000021150	ECHDC1 (ENSKMAG00000021158)	RNF146 (ENSKMAG00000021163)	ENSKMAG00000021169	rspo3 (ENSKMAG00000021174)	trmt11 (ENSKMAG00000021188)	ENSKMAG00000021212	hint3 (ENSKMAG00000021221)
Turquoise killifish	MODERN SPECIES	1614	DDC (ENSNFUG00015005032)	ENTPD3 (ENSNFUG00015004988)	ENSNFUG00015004981	ENSNFUG00015004976	rbms3 (ENSNFUG00015004881)	azi2 (ENSNFUG00015004843)	CMC1 (ENSNFUG00015004826)	eomesb (ENSNFUG00015004672)	ANKIB1 (ENSNFUG00015004644)	ENSNFUG00015004618	ENSNFUG00015004601	ENSNFUG00015004594	eif3ha (ENSNFUG00015004569)	rad21a (ENSNFUG00015004544)	EXT1 (ENSNFUG00015004479)	STRUMPELLIN (ENSNFUG00015004436) #22	nsmce2 (ENSNFUG00015004400)	LRATD2 (ENSNFUG00015004390) #19	KLHL38 (ENSNFUG00015004377)	fbxo32 (ENSNFUG00015004359)	BX571853.2 (ENSNFUG00015004340)	ELOVL4 (ENSNFUG00015004334)	SOGA3 (ENSNFUG00015004326)	si:ch211-151o1.4 (ENSNFUG00015004313)	ECHDC1 (ENSNFUG00015004294)	RNF146 (ENSNFUG00015004286)	ENSNFUG00015004278	RSPO3 (ENSNFUG00015004276)	ENSNFUG00015004271	ENSNFUG00015004266	TRMT11 (ENSNFUG00015004143)
Cyprinodontoidei	ANCESTRAL SPECIES		ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Poeciliinae	ANCESTRAL SPECIES	22	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Poecilia	ANCESTRAL SPECIES		ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
NAME_6	ANCESTRAL SPECIES	117	ENSGT01020000230359.A	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00650000094686	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a
Sailfin molly	MODERN SPECIES	587													eif3ha (ENSPLAG00000009759)	rad21a (ENSPLAG00000009734)	EXT1 (ENSPLAG00000009682)	washc5 (ENSPLAG00000009627) #22	nsmce2 (ENSPLAG00000000215)	LRATD2 (ENSPLAG00000009496) #19	KLHL38 (ENSPLAG00000009483)	fbxo32 (ENSPLAG00000000536)	PRELID3A (ENSPLAG00000009423)	elovl4a (ENSPLAG00000000210)
Amazon molly	MODERN SPECIES	252	ENSPFOG00000017756	cobl (ENSPFOG00000017759)	GRB10 (ENSPFOG00000017779)	ddc (ENSPFOG00000017822)	entpd3 (ENSPFOG00000017854)	rbms3 (ENSPFOG00000017887)	azi2 (ENSPFOG00000017923)	cmc1 (ENSPFOG00000017932)	eomesb (ENSPFOG00000017938)	ANKIB1 (ENSPFOG00000017957)	zgc:110410 (ENSPFOG00000018007)	CSMD3 (ENSPFOG00000018059)	eif3ha (ENSPFOG00000018331)	rad21a (ENSPFOG00000018350)	EXT1 (ENSPFOG00000018364)	washc5 (ENSPFOG00000018407) #22	LRATD2 (ENSPFOG00000020863) #19	KLHL38 (ENSPFOG00000018456)	fbxo32 (ENSPFOG00000018467)	PRELID3A (ENSPFOG00000018489)	elovl4a (ENSPFOG00000018494)	elovl4a (ENSPFOG00000018502)	SOGA3 (ENSPFOG00000018510)	ECHDC1 (ENSPFOG00000018523)	RNF146 (ENSPFOG00000018532)	mdh2 (ENSPFOG00000020864)	rspo3 (ENSPFOG00000018537)	RNF146 (ENSPFOG00000023653)	mdh2 (ENSPFOG00000020865)	trmt11 (ENSPFOG00000018545)	hint3 (ENSPFOG00000022004)
Guppy	MODERN SPECIES	446	ddc (ENSPREG00000011646)	entpd3 (ENSPREG00000011705)	rbms3 (ENSPREG00000011880)	ENSPREG00000011985	azi2 (ENSPREG00000012001)	cmc1 (ENSPREG00000012028)	ENSPREG00000012043	eomesb (ENSPREG00000012055)	ANKIB1 (ENSPREG00000012074)	zgc:110410 (ENSPREG00000012092)	CSMD3 (ENSPREG00000012170)	eif3ha (ENSPREG00000012339)	ENSPREG00000012352	rad21a (ENSPREG00000012360)	EXT1 (ENSPREG00000012396)	washc5 (ENSPREG00000012454) #22	nsmce2 (ENSPREG00000012578)	LRATD2 (ENSPREG00000012681) #19	KLHL38 (ENSPREG00000012696)	fbxo32 (ENSPREG00000012706)	PRELID3A (ENSPREG00000012735)	elovl4a (ENSPREG00000012755)	SOGA3 (ENSPREG00000012776)	si:ch211-151o1.4 (ENSPREG00000012798)	ECHDC1 (ENSPREG00000012833)	RNF146 (ENSPREG00000012847)	rspo3 (ENSPREG00000012892)	trmt11 (ENSPREG00000012923)	ENSPREG00000012962	hint3 (ENSPREG00000012984)	ENSPREG00000013013
Platyfish	MODERN SPECIES	17	ENSXMAG00000020910	cobl (ENSXMAG00000025699)	GRB10 (ENSXMAG00000000791)	ddc (ENSXMAG00000000755)	entpd3 (ENSXMAG00000000746)	rbms3 (ENSXMAG00000021783)	azi2 (ENSXMAG00000014311)	cmc1 (ENSXMAG00000014309)	eomesb (ENSXMAG00000014284)	ANKIB1 (ENSXMAG00000014263)	zgc:110410 (ENSXMAG00000014259)	CSMD3 (ENSXMAG00000014146)	eif3ha (ENSXMAG00000008569)	rad21a (ENSXMAG00000008586)	EXT1 (ENSXMAG00000029962)	washc5 (ENSXMAG00000008620) #22	nsmce2 (ENSXMAG00000021891)	LRATD2 (ENSXMAG00000008654) #19	KLHL38 (ENSXMAG00000008658)	fbxo32 (ENSXMAG00000008663)	ENSXMAG00000021788	elovl4a (ENSXMAG00000027820)	SOGA3 (ENSXMAG00000010121)	si:ch211-151o1.4 (ENSXMAG00000025731)	ECHDC1 (ENSXMAG00000008677)	RNF146 (ENSXMAG00000008684)	mdh2 (ENSXMAG00000019526)	rspo3 (ENSXMAG00000021354)	trmt11 (ENSXMAG00000008688)	hint3 (ENSXMAG00000008704)	ENSXMAG00000029984
NAME_4	ANCESTRAL SPECIES	61	ENSGT00390000011559	ENSGT00940000166893	ENSGT00940000158255	ENSGT00630000089917	ENSGT00940000162418	ENSGT00940000159459	ENSGT00940000160576	ENSGT00390000014107.a.b	ENSGT00940000153117.A	ENSGT00940000154655.a.i.b	ENSGT00990000203789	ENSGT00940000176888	ENSGT00940000160706	ENSGT00390000010887.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Mummichog	MODERN SPECIES	2213	cobl (ENSFHEG00000004950)	GRB10 (ENSFHEG00000004890)	ddc (ENSFHEG00000004850)	entpd3 (ENSFHEG00000004810)	rbms3 (ENSFHEG00000004787)	azi2 (ENSFHEG00000004614)	cmc1 (ENSFHEG00000004600)	eomesb (ENSFHEG00000004590)	ANKIB1 (ENSFHEG00000004570)	zgc:110410 (ENSFHEG00000004490)	CSMD3 (ENSFHEG00000004409)	eif3ha (ENSFHEG00000004234)	ENSFHEG00000004215	rad21a (ENSFHEG00000004205)	EXT1 (ENSFHEG00000004175)	washc5 (ENSFHEG00000004158) #22	nsmce2 (ENSFHEG00000004030)	LRATD2 (ENSFHEG00000004023) #19	KLHL38 (ENSFHEG00000004015)	fbxo32 (ENSFHEG00000004003)	PRELID3A (ENSFHEG00000003978)	elovl4a (ENSFHEG00000003953)	SOGA3 (ENSFHEG00000003609)	si:ch211-151o1.4 (ENSFHEG00000003553)	ECHDC1 (ENSFHEG00000003538)	RNF146 (ENSFHEG00000003526)	mdh2 (ENSFHEG00000003518)	rspo3 (ENSFHEG00000003511)	trmt11 (ENSFHEG00000003504)	hint3 (ENSFHEG00000003469)
Sheepshead minnow	MODERN SPECIES	370												ENSCVAG00000020344	eif3ha (ENSCVAG00000020390)	rad21a (ENSCVAG00000020434)	ext1a (ENSCVAG00000020461)	washc5 (ENSCVAG00000020523) #22	nsmce2 (ENSCVAG00000020530)	LRATD2 (ENSCVAG00000020535) #19	KLHL38 (ENSCVAG00000020537)	fbxo32 (ENSCVAG00000020566)	PRELID3A (ENSCVAG00000020593)	elovl4a (ENSCVAG00000020620)	SOGA3 (ENSCVAG00000020680)	si:ch211-151o1.4 (ENSCVAG00000020719)	ECHDC1 (ENSCVAG00000020724)	RNF146 (ENSCVAG00000020731)	ENSCVAG00000020739	rspo3 (ENSCVAG00000020749)	trmt11 (ENSCVAG00000020822)	ENSCVAG00000020840	hint3 (ENSCVAG00000020858)
Oryzias	ANCESTRAL SPECIES	2	ENSGT00940000154766.b	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00390000001962	ENSGT00880000138038.o	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Oryzias_a	ANCESTRAL SPECIES	9	ENSGT00940000154766.b	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038.p	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Chinese medaka	MODERN SPECIES	495	ENSOSIG00000010269	cobl (ENSOSIG00000010260)	GRB10 (ENSOSIG00000007354)	ddc (ENSOSIG00000007240)	entpd3 (ENSOSIG00000007233)	rbms3 (ENSOSIG00000007116)	azi2 (ENSOSIG00000007106)	cmc1 (ENSOSIG00000007105)	eomesb (ENSOSIG00000007104)	ANKIB1 (ENSOSIG00000007036)	zgc:110410 (ENSOSIG00000007023)	CSMD3 (ENSOSIG00000006990)	eif3ha (ENSOSIG00000006959)	rad21a (ENSOSIG00000006953)	ext1a (ENSOSIG00000006714)	washc5 (ENSOSIG00000006683) #22	nsmce2 (ENSOSIG00000006649)	LRATD2 (ENSOSIG00000006647) #19	KLHL38 (ENSOSIG00000006646)	fbxo32 (ENSOSIG00000006645)	ENSOSIG00000006641	elovl4a (ENSOSIG00000006638)	SOGA3 (ENSOSIG00000006635)	si:ch211-151o1.4 (ENSOSIG00000006632)	ECHDC1 (ENSOSIG00000006437)	RNF146 (ENSOSIG00000006427)	ENSOSIG00000006426	rspo3 (ENSOSIG00000006423)	trmt11 (ENSOSIG00000006419)	ENSOSIG00000006415	hint3 (ENSOSIG00000006412)
Japanese Medaka HdrR	MODERN SPECIES	7	CCR8 (ENSORLG00000023783)	ENSORLG00000005279	cobl (ENSORLG00000005289)	ENSORLG00000024198	GRB10 (ENSORLG00000005315)	ddc (ENSORLG00000005340)	RBMS3 (ENSORLG00000005370)	azi2 (ENSORLG00000005382)	cmc1 (ENSORLG00000005385)	eomesb (ENSORLG00000005393)	ANKIB1 (ENSORLG00000005406)	zgc:110410 (ENSORLG00000005416)	ENSORLG00000005457	rad21 (ENSORLG00000005535)	ext1a (ENSORLG00000005564)	washc5 (ENSORLG00000005628) #22	nsmce2 (ENSORLG00000030400)	ENSORLG00000005640 #19	ENSORLG00000005665	fbxo32 (ENSORLG00000005696)	ENSORLG00000005707	elovl4a (ENSORLG00000025861)	SOGA3 (ENSORLG00000005712)	si:ch211-151o1.4 (ENSORLG00000023327)	ECHDC1 (ENSORLG00000026238)	RNF146 (ENSORLG00000005744)	mdh2 (ENSORLG00000005748)	rspo3 (ENSORLG00000005755)	trmt11 (ENSORLG00000005779)	ENSORLG00000005785	hint3 (ENSORLG00000026540)
Oryzias_b	ANCESTRAL SPECIES	1	ENSGT00940000154766.b	ENSGT00530000063608.A	ENSGT00940000155909.o.a	ENSGT00940000156004	ENSGT01100000263542.A	ENSGT00940000157131.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.h #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00390000001962	ENSGT00880000138038.o	ENSGT00390000000358.y	ENSGT00390000016686	ENSGT00940000157815.a	ENSGT00390000018131	ENSGT00940000165475	ENSGT00510000047616.b
Indian medaka	MODERN SPECIES	5	ENSOMEG00000014385	cobl (ENSOMEG00000014589)	GRB10 (ENSOMEG00000014643)	ddc (ENSOMEG00000014693)	entpd3 (ENSOMEG00000014729)	rbms3 (ENSOMEG00000014805)	azi2 (ENSOMEG00000014829)	cmc1 (ENSOMEG00000014859)	eomesb (ENSOMEG00000014884)	ANKIB1 (ENSOMEG00000014965)	ENSOMEG00000015026	CSMD3 (ENSOMEG00000015526)	eif3ha (ENSOMEG00000015712)	rad21a (ENSOMEG00000015753)	ext1a (ENSOMEG00000015798)	washc5 (ENSOMEG00000015924) #22	nsmce2 (ENSOMEG00000015974)	LRATD2 (ENSOMEG00000015996) #19	KLHL38 (ENSOMEG00000000402)	fbxo32 (ENSOMEG00000016047)	ENSOMEG00000016024	elovl4a (ENSOMEG00000016088)	SOGA3 (ENSOMEG00000016122)	ENSOMEG00000016134	ECHDC1 (ENSOMEG00000016146)	RNF146 (ENSOMEG00000016159)	ECHDC1 (ENSOMEG00000016167)	mdh2 (ENSOMEG00000016173)	rspo3 (ENSOMEG00000016181)	trmt11 (ENSOMEG00000016205)	ENSOMEG00000016216
Javanese ricefish	MODERN SPECIES	7	trioa (ENSOJAG00000020834)	cobl (ENSOJAG00000021465)	GRB10 (ENSOJAG00000021551)	ddc (ENSOJAG00000022050)	entpd3 (ENSOJAG00000022084)	rbms3 (ENSOJAG00000022101)	azi2 (ENSOJAG00000022113)	cmc1 (ENSOJAG00000022115)	eomesb (ENSOJAG00000022127)	ANKIB1 (ENSOJAG00000022143)	ENSOJAG00000022256	CSMD3 (ENSOJAG00000022432)	EIF3H (ENSOJAG00000023048)	rad21a (ENSOJAG00000023068)	ext1a (ENSOJAG00000023112)	washc5 (ENSOJAG00000023198) #22	LRATD2 (ENSOJAG00000023248) #19	KLHL38 (ENSOJAG00000023252)	fbxo32 (ENSOJAG00000023260)	PRELID3A (ENSOJAG00000023282)	elovl4a (ENSOJAG00000023285)	SOGA3 (ENSOJAG00000023287)	ECHDC1 (ENSOJAG00000023294)	RNF146 (ENSOJAG00000023296)	mdh2 (ENSOJAG00000023300)	rspo3 (ENSOJAG00000023303)	trmt11 (ENSOJAG00000023316)	ENSOJAG00000023331	hint3 (ENSOJAG00000023334)	ENSOJAG00000023336	ENSOJAG00000023339
Tiger tail seahorse	MODERN SPECIES	458																washc5 (ENSHCOG00000019116) #22	ENSHCOG00000019133	LRATD2 (ENSHCOG00000019141) #19	ENSHCOG00000019176	KLHL38 (ENSHCOG00000019205)	fbxo32 (ENSHCOG00000019230)	PRELID3A (ENSHCOG00000019248)	elovl4a (ENSHCOG00000019273)	ENSHCOG00000019281	hint3 (ENSHCOG00000019294)	ENSHCOG00000019304	trmt11 (ENSHCOG00000019331)
Pinecone sodierfish	MODERN SPECIES	7	ENSMMDG00005023935	ENSMMDG00005023933	GRB10 (ENSMMDG00005023522)	ddc (ENSMMDG00005023491)	entpd3 (ENSMMDG00005023476)	rbms3 (ENSMMDG00005023469)	azi2 (ENSMMDG00005023467)	cmc1 (ENSMMDG00005023465)	eomesb (ENSMMDG00005023437)	ANKIB1 (ENSMMDG00005023419)	zgc:110410 (ENSMMDG00005023414)	CSMD3 (ENSMMDG00005023065)	eif3ha (ENSMMDG00005023015)	rad21a (ENSMMDG00005023008)	EXT1 (ENSMMDG00005023005)	washc5 (ENSMMDG00005022969) #22	nsmce2 (ENSMMDG00005022966)	ENSMMDG00005022965	LRATD2 (ENSMMDG00005022964) #19	KLHL38 (ENSMMDG00005022962)	fbxo32 (ENSMMDG00005022930)	PRELID3A (ENSMMDG00005022924)	elovl4a (ENSMMDG00005022911)	SOGA3 (ENSMMDG00005022909)	ENSMMDG00005022908	ECHDC1 (ENSMMDG00005022906)	RNF146 (ENSMMDG00005022905)	mdh2 (ENSMMDG00005022904)	rspo3 (ENSMMDG00005022903)	ENSMMDG00005022901	trmt11 (ENSMMDG00005022789)
Cod	MODERN SPECIES	2	ddc (ENSGMOG00000004282)	entpd3 (ENSGMOG00000003928)	RBMS3 (ENSGMOG00000032451)	ENSGMOG00000029549	azi2 (ENSGMOG00000003761)	ENSGMOG00000022807	eomesb (ENSGMOG00000003675)	ENSGMOG00000003489	ENSGMOG00000025873	ENSGMOG00000032946	ENSGMOG00000028760	ENSGMOG00000028535	eif3ha (ENSGMOG00000003373)	rad21a (ENSGMOG00000003193)	ENSGMOG00000027675	ENSGMOG00000002804 #22	ENSGMOG00000026115	ENSGMOG00000002787 #19	ENSGMOG00000002660	ENSGMOG00000002517	ENSGMOG00000002471	elovl4a (ENSGMOG00000002373)	ENSGMOG00000035237	si:ch211-151o1.4 (ENSGMOG00000035727)	ENSGMOG00000002320	ENSGMOG00000005393	ENSGMOG00000018918	TNFRSF11B (ENSGMOG00000005446)	ENSGMOG00000016906	MAL2 (ENSGMOG00000016900)	ENSGMOG00000017119 #25
Protacanthopterygii	ANCESTRAL SPECIES	1	ENSGT00940000157880.g.a	ENSGT00940000155488.m.b	ENSGT00940000158391	ENSGT00940000157527.a	ENSGT00940000157131.b	ENSGT00560000077278.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00530000063692.a	ENSGT00500000044936	ENSGT00940000154684	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478
Northern pike	MODERN SPECIES	15	rbms3 (ENSELUG00000002862)	ENSELUG00000002899	ENSELUG00000002903	ENSELUG00000002915	azi2 (ENSELUG00000002935)	cmc1 (ENSELUG00000002947)	eomesb (ENSELUG00000002953)	ANKIB1 (ENSELUG00000002972)	ENSELUG00000002995	CSMD3 (ENSELUG00000003055)	ENSELUG00000032866	ENSELUG00000031654	eif3ha (ENSELUG00000003129)	rad21a (ENSELUG00000003181)	ext1a (ENSELUG00000003201)	washc5 (ENSELUG00000003237) #22	nsmce2 (ENSELUG00000003259)	LRATD2 (ENSELUG00000003267) #19	KLHL38 (ENSELUG00000003275)	fbxo32 (ENSELUG00000003297)	PRELID3A (ENSELUG00000003312)	elovl4a (ENSELUG00000003322)	SOGA3 (ENSELUG00000003336)	si:ch211-151o1.4 (ENSELUG00000001588)	ECHDC1 (ENSELUG00000003366)	fbxo43 (ENSELUG00000003389)	ENSELUG00000003417	VPS13B (ENSELUG00000003468)	ENSELUG00000030603	ENSELUG00000027765	osr2 (ENSELUG00000003493)
Salmoninae	ANCESTRAL SPECIES	2	ENSGT00940000155721.b.b	ENSGT00390000012690.a	ENSGT00390000001296	ENSGT00390000003114.e.b.b.e.a.a	ENSGT00940000157131.b	ENSGT00560000077278.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00950000182986.a.b.b.l.a.b #20	ENSGT00940000159198.g #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000012138.a.b.c.b	ENSGT00530000063692.a	ENSGT00500000044936.c.a	ENSGT00940000154684.cb.a.a.a	ENSGT00940000160530
Salmoninae_a	ANCESTRAL SPECIES	53	ENSGT00390000012690.a	ENSGT00390000001296	ENSGT00390000003114.e.b.b.e.a.a	ENSGT00940000157131.b	ENSGT00940000158153.a.j	ENSGT00560000077278.b	ENSGT00940000153704.A.q	ENSGT00940000166989	ENSGT00940000158728.l	ENSGT00940000157621	ENSGT01050000244890.b	ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a.h	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000012138.a.b.c.b.a	ENSGT00530000063692.a	ENSGT00500000044936.c.a	ENSGT00940000154684.cb.a.a.a	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321
Salmo	ANCESTRAL SPECIES	192												ENSGT00940000155549.a.b	ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00990000211233	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a.h	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000012138.a.b.c.b.a	ENSGT00530000063692.a	ENSGT00500000044936.c.b
Atlantic salmon	DUPLICATION
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES	11	RBMS3 (ENSSSAG00000099067)	ENSSSAG00000068060	ZCWPW2 (ENSSSAG00000117383)	cc068 (ENSSSAG00000090152)	ENSSSAG00000002874	ENSSSAG00000118788	ENSSSAG00000096430	ENSSSAG00000039719	ENSSSAG00000055596	ENSSSAG00000104801	ENSSSAG00000112351	EIF3H (ENSSSAG00000107207)	ENSSSAG00000109898	ENSSSAG00000082776	ENSSSAG00000075605	ENSSSAG00000090658 #22	ENSSSAG00000103856	ENSSSAG00000097633 #19
Atlantic salmon	MODERN SPECIES	814															ENSSSAG00000100107	ENSSSAG00000095073 #22	ENSSSAG00000114169
Atlantic salmon	MODERN SPECIES	24	stt3b (ENSSSAG00000002173)	GADL1 (ENSSSAG00000009722)	TGFBR2 (ENSSSAG00000114103)	RBMS3 (ENSSSAG00000085892)	ENSSSAG00000111480	ENSSSAG00000082765	ZCWPW2 (ENSSSAG00000084034)	azi2 (ENSSSAG00000110979)	ENSSSAG00000110471	eomesb (ENSSSAG00000114455)	ENSSSAG00000103014	ENSSSAG00000061854	ENSSSAG00000094977	ENSSSAG00000114569	ENSSSAG00000105203	ENSSSAG00000039876 #22	ENSSSAG00000040246	ENSSSAG00000118562 #19
River trout	DUPLICATION
River trout	MODERN SPECIES	439	cmc1 (ENSSTUG00000026574)	eomesb (ENSSTUG00000026559)	ANKIB1 (ENSSTUG00000026039)	zgc:110410 (ENSSTUG00000025991)	ENSSTUG00000025985	ENSSTUG00000025970	azi2 (ENSSTUG00000025949)	cmc1 (ENSSTUG00000025915)	eomesb (ENSSTUG00000025901)	ANKIB1 (ENSSTUG00000025837)	zgc:110410 (ENSSTUG00000025811)	ENSSTUG00000025809	eif3ha (ENSSTUG00000025699)	rad21a (ENSSTUG00000025591)	ext1a (ENSSTUG00000025497)	washc5 (ENSSTUG00000025296) #22	nsmce2 (ENSSTUG00000025264)	LRATD2 (ENSSTUG00000025252) #19	KLHL38 (ENSSTUG00000025240)	LRATD2 (ENSSTUG00000025226) #19	ENSSTUG00000025183	washc5 (ENSSTUG00000025070) #22	ext1a (ENSSTUG00000040542)	rad21a (ENSSTUG00000040460)	eif3ha (ENSSTUG00000040448)	ENSSTUG00000040439	CSMD3 (ENSSTUG00000037382)
River trout	MODERN SPECIES	439											CSMD3 (ENSSTUG00000037382)	ENSSTUG00000040439	eif3ha (ENSSTUG00000040448)	rad21a (ENSSTUG00000040460)	ext1a (ENSSTUG00000040542)	washc5 (ENSSTUG00000025070) #22	ENSSTUG00000025183	LRATD2 (ENSSTUG00000025226) #19	KLHL38 (ENSSTUG00000025240)	LRATD2 (ENSSTUG00000025252) #19	nsmce2 (ENSSTUG00000025264)	washc5 (ENSSTUG00000025296) #22	ext1a (ENSSTUG00000025497)	rad21a (ENSSTUG00000025591)	eif3ha (ENSSTUG00000025699)	ENSSTUG00000025809	zgc:110410 (ENSSTUG00000025811)	ANKIB1 (ENSSTUG00000025837)	eomesb (ENSSTUG00000025901)	cmc1 (ENSSTUG00000025915)	azi2 (ENSSTUG00000025949)
Oncorhynchus	ANCESTRAL SPECIES	100												ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.e.k	ENSGT00940000155321.d.a	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.g.l #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a.h	ENSGT00950000182982.C.c.a.g	ENSGT00950000182982.A.a	ENSGT00880000138038	ENSGT00390000012138.a.b.c.b.a	ENSGT00530000063692.a	ENSGT00500000044936.c.a	ENSGT00940000154684.cb.a.a.a	ENSGT00940000160530
Oncorhynchus_a	ANCESTRAL SPECIES	142													ENSGT00730000111042	ENSGT00940000154655.a.i.a	ENSGT00940000155321.e.k	ENSGT00390000011137 #22	ENSGT00940000164859	ENSGT00940000159198.g.l #19	ENSGT00940000157647.d	ENSGT00390000004915.a	ENSGT00950000182810.A.a.b	ENSGT01050000244838.D.a.a	ENSGT00950000182982.C.c.a.h	ENSGT00880000138038	ENSGT00390000012138.a.b.c.b.a	ENSGT00530000063692.a	ENSGT00500000044936.c.a	ENSGT00940000160530	ENSGT00940000160344	ENSGT00940000159321	ENSGT00390000017478
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	1346													ENSOKIG00005045431	ENSOKIG00005045371	EXT1 (ENSOKIG00005045324)	WASHC5 (ENSOKIG00005045136) #22	ENSOKIG00005045085
Coho salmon	MODERN SPECIES	31	ANKIB1 (ENSOKIG00005016542)	ENSOKIG00005016741	ENSOKIG00005016745	ENSOKIG00005016751	CSMD3 (ENSOKIG00005016800)	ENSOKIG00005017061	ENSOKIG00005017075	ENSOKIG00005017084	ENSOKIG00005017096	ENSOKIG00005017103	ENSOKIG00005017110	ENSOKIG00005017136	EIF3H (ENSOKIG00005017148)	ENSOKIG00005017213	EXT1 (ENSOKIG00005017266)	washc5 (ENSOKIG00005017362) #22	nsmce2 (ENSOKIG00005017448)	LRATD2 (ENSOKIG00005017509) #19	KLHL38 (ENSOKIG00005017514)	FBXO32 (ENSOKIG00005017524)	PRELID3A (ENSOKIG00005017542)	ELOVL4 (ENSOKIG00005017648)	SOGA3 (ENSOKIG00005017670)	ENSOKIG00005017690	ENSOKIG00005017700	fbxo43 (ENSOKIG00005017727)	ENSOKIG00005017737	ENSOKIG00005017765	ENSOKIG00005017774	OSR2 (ENSOKIG00005017820)	KCNS2 (ENSOKIG00005017842)
Rainbow trout	MODERN SPECIES	11	ENSOMYG00000053102	ENSOMYG00000059001	ENSOMYG00000026140	ENSOMYG00000058229	ctnnb1 (ENSOMYG00000003085)	ULK4 (ENSOMYG00000057309)	ENSOMYG00000067864	TRAK1 (ENSOMYG00000054406)	ENSOMYG00000071886	ccka (ENSOMYG00000025264)	ENSOMYG00000060377	ENSOMYG00000040544	ENSOMYG00000009897	ENSOMYG00000059968	ENSOMYG00000047907	ENSOMYG00000023106 #22	ENSOMYG00000054998	ENSOMYG00000074908 #19	ENSOMYG00000052788	ENSOMYG00000027996	ENSOMYG00000060832	ENSOMYG00000074461	ENSOMYG00000063820	elovl4a (ENSOMYG00000024737)	ENSOMYG00000047968	si:ch211-151o1.4 (ENSOMYG00000052485)	ENSOMYG00000030225	RL30 (ENSOMYG00000025458)	FBXO43 (ENSOMYG00000057769)	RGS22 (ENSOMYG00000067468)	VPS13B (ENSOMYG00000064938)
Huchen	DUPLICATION
Huchen	MODERN SPECIES	11937																ENSHHUG00000012196 #22
Huchen	DUPLICATION
Huchen	DUPLICATION
Huchen	MODERN SPECIES	8234															ENSHHUG00000004441 #22	ENSHHUG00000004430 #22
Huchen	MODERN SPECIES	8234																ENSHHUG00000004441 #22	ENSHHUG00000004430 #22
Huchen	MODERN SPECIES	6823																washc5 (ENSHHUG00000005210) #22
Elephant shark	MODERN SPECIES	1672		sntb1 (ENSCMIG00000010570)	MTBP (ENSCMIG00000010576)	mrpl13 (ENSCMIG00000010580)	COL14A1 (ENSCMIG00000010673)	deptor (ENSCMIG00000010920)	dscc1 (ENSCMIG00000010923)	taf2 (ENSCMIG00000010987)	ENPP2 (ENSCMIG00000011162)	CCN3 (ENSCMIG00000011184)	MAL2 (ENSCMIG00000011187)	si:ch211-93i7.4 (ENSCMIG00000011189)	ENSCMIG00000011193	ENSCMIG00000011200	sqlea (ENSCMIG00000011211) #23	washc5 (ENSCMIG00000011281) #22
Cyclostomata	ANCESTRAL SPECIES	1168															ENSGT00390000011759.t #23	ENSGT00390000011137 #22
Lamprey	MODERN SPECIES	1196																washc5 (ENSPMAG00000008622) #22	ENSPMAG00000008651
Hagfish	MODERN SPECIES	716															ENSEBUG00000012470 #23	washc5 (ENSEBUG00000011536) #22	ENSEBUG00000011986	ENSEBUG00000012079