Gnathostomata ANCESTRAL SPECIES 155 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 Euteleostomi ANCESTRAL SPECIES 11 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 Sarcopterygii ANCESTRAL SPECIES 16 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 Tetrapoda ANCESTRAL SPECIES 4 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000164536 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 Amniota ANCESTRAL SPECIES 1 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 Mammalia ANCESTRAL SPECIES 2 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 Theria ANCESTRAL SPECIES 4 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 Eutheria ANCESTRAL SPECIES 9 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00910000147275 ENSGT00940000162208 Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00910000147275 ENSGT00940000162208 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 Glires ANCESTRAL SPECIES 5 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 Rodentia ANCESTRAL SPECIES 6 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 Rodentia_B ANCESTRAL SPECIES 18 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 Myomorpha ANCESTRAL SPECIES 21 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 Muroidea ANCESTRAL SPECIES 22 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 Muroidea_A ANCESTRAL SPECIES 11 ENSGT01100000264286 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 Murinae ANCESTRAL SPECIES 36 ENSGT01100000264286 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 Mus ANCESTRAL SPECIES 15 ENSGT00940000154164.c ENSGT01100000264286 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.b ENSGT00640000091497.b ENSGT00940000158416 ENSGT01050000244879.b.a.b.b ENSGT00940000154319.u.a ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 ENSGT01100000265115 ENSGT00940000162914 ENSGT00390000003223 Mus_A ANCESTRAL SPECIES 11 ENSGT01100000264286 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00900000143316 #11 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.b ENSGT00640000091497.b ENSGT00940000158416 ENSGT01050000244879.b.a.b.b ENSGT00940000154319.u.a ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 ENSGT01100000265115 ENSGT00940000162914 ENSGT00390000003223 Mus_B ANCESTRAL SPECIES 10 ENSGT01100000264286 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.o #10 ENSGT00900000143316 #11 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.b.g.a ENSGT00640000091497.b ENSGT00940000158416 ENSGT01050000244879.b.a.b.b ENSGT00940000154319.u.a ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 ENSGT00940000162914 ENSGT00390000003223 ENSGT00390000015655.b Mus_C ANCESTRAL SPECIES 7 ENSGT01100000264286 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.o #10 ENSGT00900000143316 #11 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.b.g.a ENSGT00640000091497.b ENSGT00940000158416 ENSGT01050000244879.b.a.b.b ENSGT00940000154319.u.a ENSGT00530000063353.a.b.a ENSGT00940000160831 ENSGT00940000157334 ENSGT00940000156535 ENSGT00940000162914 ENSGT00390000003223 ENSGT00390000015655.b Steppe mouse MODERN SPECIES 3355 Pdss2 (ENSMSIG00000030310) #7 Bend3 (ENSMSIG00000030306) #8 Mtres1 (ENSMSIG00000030303) #9 ENSMSIG00000030302 #10 ENSMSIG00000030301 #11 Qrsl1 (ENSMSIG00000030298) #12 Rtn4ip1 (ENSMSIG00000030296) #13 Crybg1 (ENSMSIG00000030293) #14 ENSMSIG00000030292 #15 Atg5 (ENSMSIG00000030288) #16 Prdm1 (ENSMSIG00000030278) #17 ENSMSIG00000030269 #18 Popdc3 (ENSMSIG00000030266) #19 Bves (ENSMSIG00000030263) #20 Lin28b (ENSMSIG00000030258) #21 Hace1 (ENSMSIG00000030256) #22 spretus MODERN SPECIES 1 MGP_SPRETEiJ_G0016094 Pdss2 (MGP_SPRETEiJ_G0016095) #7 Bend3 (MGP_SPRETEiJ_G0016096) #8 Mtres1 (MGP_SPRETEiJ_G0016097) #9 MGP_SPRETEiJ_G0016098 #10 MGP_SPRETEiJ_G0016099 #11 Qrsl1 (MGP_SPRETEiJ_G0016100) #12 Rtn4ip1 (MGP_SPRETEiJ_G0016101) #13 Crybg1 (MGP_SPRETEiJ_G0016102) #14 Atg5 (MGP_SPRETEiJ_G0016103) #16 Prdm1 (MGP_SPRETEiJ_G0016104) #17 Prep (MGP_SPRETEiJ_G0016105) #18 Popdc3 (MGP_SPRETEiJ_G0016106) #19 Bves (MGP_SPRETEiJ_G0016107) #20 Lin28b (MGP_SPRETEiJ_G0016108) #21 Hace1 (MGP_SPRETEiJ_G0016109) #22 Grik2 (MGP_SPRETEiJ_G0016110) Ascc3 (MGP_SPRETEiJ_G0016111) Sim1 (MGP_SPRETEiJ_G0016112) MGP_SPRETEiJ_G0016113 Fam162b (MGP_SPRETEiJ_G0016115) Gprc6a (MGP_SPRETEiJ_G0016116) Rfx6 (MGP_SPRETEiJ_G0016117) MGP_SPRETEiJ_G0016118 Vgll2 (MGP_SPRETEiJ_G0016119) Ros1 (MGP_SPRETEiJ_G0016120) Dcbld1 (MGP_SPRETEiJ_G0016121) Gopc (MGP_SPRETEiJ_G0016122) MGP_SPRETEiJ_G0016123 MGP_SPRETEiJ_G0016124 Nus1 (MGP_SPRETEiJ_G0016125) Mouse MODERN SPECIES 1 Sobp (ENSMUSG00000038248) Pdss2 (ENSMUSG00000038240) #7 Bend3 (ENSMUSG00000038214) #8 Pam16l (ENSMUSG00000045886) Mtres1 (ENSMUSG00000019797) #9 Cd24a (ENSMUSG00000047139) #10 Qrsl1 (ENSMUSG00000019863) #12 Rtn4ip1 (ENSMUSG00000019864) #13 Crybg1 (ENSMUSG00000019866) #14 Atg5 (ENSMUSG00000038160) #16 Prdm1 (ENSMUSG00000038151) #17 Prep (ENSMUSG00000019849) #18 Popdc3 (ENSMUSG00000019848) #19 Bves (ENSMUSG00000071317) #20 Lin28b (ENSMUSG00000063804) #21 Hace1 (ENSMUSG00000038822) #22 Grik2 (ENSMUSG00000056073) Ascc3 (ENSMUSG00000038774) Sim1 (ENSMUSG00000019913) Gm49339 (ENSMUSG00000062593) Lilrb4b (ENSMUSG00000112023) Lilrb4a (ENSMUSG00000112148) Fam162b (ENSMUSG00000019909) Gprc6a (ENSMUSG00000019905) Rfx6 (ENSMUSG00000019900) Vgll2 (ENSMUSG00000049641) Ros1 (ENSMUSG00000019893) Dcbld1 (ENSMUSG00000019891) Gopc (ENSMUSG00000019861) Nepn (ENSMUSG00000038624) Nus1 (ENSMUSG00000023068) Ryukyu mouse MODERN SPECIES 1 MGP_CAROLIEiJ_G0015285 Pdss2 (MGP_CAROLIEiJ_G0015286) #7 Bend3 (MGP_CAROLIEiJ_G0015287) #8 Mtres1 (MGP_CAROLIEiJ_G0015288) #9 MGP_CAROLIEiJ_G0015289 #10 MGP_CAROLIEiJ_G0015290 #11 Qrsl1 (MGP_CAROLIEiJ_G0015291) #12 Rtn4ip1 (MGP_CAROLIEiJ_G0015292) #13 Crybg1 (MGP_CAROLIEiJ_G0015293) #14 Atg5 (MGP_CAROLIEiJ_G0015294) #16 Prdm1 (MGP_CAROLIEiJ_G0015295) #17 Prep (MGP_CAROLIEiJ_G0015296) #18 Popdc3 (MGP_CAROLIEiJ_G0015297) #19 Bves (MGP_CAROLIEiJ_G0015298) #20 Lin28b (MGP_CAROLIEiJ_G0015299) #21 Hace1 (MGP_CAROLIEiJ_G0015300) #22 Grik2 (MGP_CAROLIEiJ_G0015301) Ascc3 (MGP_CAROLIEiJ_G0015302) Sim1 (MGP_CAROLIEiJ_G0015303) MGP_CAROLIEiJ_G0015304 Fam162b (MGP_CAROLIEiJ_G0015306) Gprc6a (MGP_CAROLIEiJ_G0015307) Rfx6 (MGP_CAROLIEiJ_G0015308) MGP_CAROLIEiJ_G0015309 Vgll2 (MGP_CAROLIEiJ_G0015310) Ros1 (MGP_CAROLIEiJ_G0015311) Dcbld1 (MGP_CAROLIEiJ_G0015312) Gopc (MGP_CAROLIEiJ_G0015313) MGP_CAROLIEiJ_G0015314 Nepn (MGP_CAROLIEiJ_G0015315) Nus1 (MGP_CAROLIEiJ_G0015316) Shrew mouse MODERN SPECIES 22 Sobp (MGP_PahariEiJ_G0030702) MGP_PahariEiJ_G0030703 Pdss2 (MGP_PahariEiJ_G0030704) #7 Bend3 (MGP_PahariEiJ_G0030705) #8 Mtres1 (MGP_PahariEiJ_G0030706) #9 MGP_PahariEiJ_G0030707 #11 Qrsl1 (MGP_PahariEiJ_G0030708) #12 Rtn4ip1 (MGP_PahariEiJ_G0030709) #13 Crybg1 (MGP_PahariEiJ_G0030710) #14 Atg5 (MGP_PahariEiJ_G0030711) #16 Prdm1 (MGP_PahariEiJ_G0030712) #17 Prep (MGP_PahariEiJ_G0030713) #18 Popdc3 (MGP_PahariEiJ_G0030714) #19 Bves (MGP_PahariEiJ_G0030715) #20 Lin28b (MGP_PahariEiJ_G0030716) #21 Hace1 (MGP_PahariEiJ_G0030717) #22 Grik2 (MGP_PahariEiJ_G0030718) Ascc3 (MGP_PahariEiJ_G0030719) Sim1 (MGP_PahariEiJ_G0030720) MGP_PahariEiJ_G0030721 MGP_PahariEiJ_G0030722 Fam162b (MGP_PahariEiJ_G0030723) Gprc6a (MGP_PahariEiJ_G0030724) Rfx6 (MGP_PahariEiJ_G0030725) MGP_PahariEiJ_G0030726 Vgll2 (MGP_PahariEiJ_G0030727) Ros1 (MGP_PahariEiJ_G0030728) Dcbld1 (MGP_PahariEiJ_G0030729) Gopc (MGP_PahariEiJ_G0030730) MGP_PahariEiJ_G0030731 Nepn (MGP_PahariEiJ_G0030732) Rat MODERN SPECIES 12 Rpl37a-ps5 (ENSRNOG00000032964) Bend3 (ENSRNOG00000046505) #8 Mtres1 (ENSRNOG00000047118) #9 AABR07045462.1 (ENSRNOG00000000320) Cd24 (ENSRNOG00000000321) #10 Qrsl1 (ENSRNOG00000026049) #12 Rtn4ip1 (ENSRNOG00000000279) #13 Crybg1 (ENSRNOG00000025998) #14 AABR07045487.1 (ENSRNOG00000037628) Atg5 (ENSRNOG00000000322) #16 Prdm1 (ENSRNOG00000000323) #17 Prep (ENSRNOG00000051061) #18 Popdc3 (ENSRNOG00000047102) #19 Bves (ENSRNOG00000043199) #20 Lin28b (ENSRNOG00000025938) #21 Hace1 (ENSRNOG00000000327) #22 ENSRNOG00000063612 AABR07045621.1 (ENSRNOG00000049150) Grik2 (ENSRNOG00000000368) Ubxn2a (ENSRNOG00000065514) Ascc3 (ENSRNOG00000037604) Sim1 (ENSRNOG00000037600) ENSRNOG00000068137 Cricetidae ANCESTRAL SPECIES 11 ENSGT00940000154164.c ENSGT01100000264286 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 Cricetinae ANCESTRAL SPECIES 67 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 Chinese hamster chok1gshd MODERN SPECIES 160 Taar6 (ENSCGRG00001002137) Taar5 (ENSCGRG00001003908) Taar4 (ENSCGRG00001001531) Taar3 (ENSCGRG00001002278) Taar2 (ENSCGRG00001005730) Taar1 (ENSCGRG00001002165) Vnn1 (ENSCGRG00001003959) Vnn3 (ENSCGRG00001002174) Slc18b1 (ENSCGRG00001024488) ENSCGRG00001024190 ENSCGRG00001024088 Eya4 (ENSCGRG00001023342) Tcf21 (ENSCGRG00001021984) Tbpl1 (ENSCGRG00001021262) Slc2a12 (ENSCGRG00001020778) Hace1 (ENSCGRG00001020322) #22 ENSCGRG00001016712 ENSCGRG00001001083 ENSCGRG00001016135 Grik2 (ENSCGRG00001014036) Ascc3 (ENSCGRG00001000918) Sim1 (ENSCGRG00001018829) ENSCGRG00001017730 Golden Hamster MODERN SPECIES 639 Atg5 (ENSMAUG00000016272) #16 Prdm1 (ENSMAUG00000021820) #17 Prep (ENSMAUG00000009728) #18 Popdc3 (ENSMAUG00000000723) #19 Bves (ENSMAUG00000001250) #20 Lin28b (ENSMAUG00000006523) #21 Hace1 (ENSMAUG00000012759) #22 Grik2 (ENSMAUG00000012525) Ascc3 (ENSMAUG00000018304) Sim1 (ENSMAUG00000021356) Egfr (ENSMAUG00000000581) Fbxo48 (ENSMAUG00000020533) Plek (ENSMAUG00000011299) Cnrip1 (ENSMAUG00000019592) Ppp3r1 (ENSMAUG00000014614) Pno1 (ENSMAUG00000014995) Dnaaf10 (ENSMAUG00000011603) C1d (ENSMAUG00000008974) Etaa1 (ENSMAUG00000010594) Meis1 (ENSMAUG00000001130) Spred2 (ENSMAUG00000013657) Actr2 (ENSMAUG00000008458) Cricetidae_B ANCESTRAL SPECIES 21 ENSGT00940000154164.c ENSGT01100000264286 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 Prairie vole MODERN SPECIES 120 Atg5 (ENSMOCG00000000288) #16 Prdm1 (ENSMOCG00000009391) #17 ENSMOCG00000018272 Prep (ENSMOCG00000018190) #18 Popdc3 (ENSMOCG00000001194) #19 Bves (ENSMOCG00000007493) #20 Lin28b (ENSMOCG00000015558) #21 Hace1 (ENSMOCG00000002477) #22 ENSMOCG00000008733 Northern American deer mouse MODERN SPECIES 7 Sobp (ENSPEMG00000026852) Pdss2 (ENSPEMG00000010336) #7 Bend3 (ENSPEMG00000031300) #8 Mtres1 (ENSPEMG00000019114) #9 ENSPEMG00000029014 #10 ENSPEMG00000009329 Qrsl1 (ENSPEMG00000009855) #12 Rtn4ip1 (ENSPEMG00000009749) #13 Crybg1 (ENSPEMG00000006428) #14 Atg5 (ENSPEMG00000023746) #16 Prdm1 (ENSPEMG00000023622) #17 Prep (ENSPEMG00000015306) #18 Popdc3 (ENSPEMG00000012534) #19 Bves (ENSPEMG00000014540) #20 Lin28b (ENSPEMG00000015724) #21 Hace1 (ENSPEMG00000006907) #22 ENSPEMG00000025768 ENSPEMG00000028199 ENSPEMG00000024704 Grik2 (ENSPEMG00000016459) ENSPEMG00000013305 Ascc3 (ENSPEMG00000015319) Sim1 (ENSPEMG00000029968) Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 962 ENSNGAG00000022645 #22 Upper Galilee mountains blind mole rat MODERN SPECIES 1522 Sobp (ENSNGAG00000001438) Pdss2 (ENSNGAG00000022824) #7 Bend3 (ENSNGAG00000021369) #8 Mtres1 (ENSNGAG00000015067) #9 ENSNGAG00000022212 ENSNGAG00000022687 #10 Qrsl1 (ENSNGAG00000023213) #12 Rtn4ip1 (ENSNGAG00000022333) #13 Crybg1 (ENSNGAG00000010488) #14 Atg5 (ENSNGAG00000017886) #16 Prdm1 (ENSNGAG00000022787) #17 Prep (ENSNGAG00000024271) #18 Popdc3 (ENSNGAG00000024046) #19 Bves (ENSNGAG00000024027) #20 Lin28b (ENSNGAG00000022808) #21 Hace1 (ENSNGAG00000017799) #22 Lesser Egyptian jerboa MODERN SPECIES 78 Scml4 (ENSJJAG00000010133) Sobp (ENSJJAG00000013825) ENSJJAG00000013046 Pdss2 (ENSJJAG00000018660) #7 Bend3 (ENSJJAG00000015264) #8 Mtres1 (ENSJJAG00000023519) #9 Qrsl1 (ENSJJAG00000012030) #12 Rtn4ip1 (ENSJJAG00000016075) #13 ENSJJAG00000017114 #14 Atg5 (ENSJJAG00000015537) #16 Prdm1 (ENSJJAG00000023075) #17 Prep (ENSJJAG00000020209) #18 Popdc3 (ENSJJAG00000014670) #19 Bves (ENSJJAG00000012371) #20 Lin28b (ENSJJAG00000011024) #21 Hace1 (ENSJJAG00000013574) #22 ENSJJAG00000000658 ENSJJAG00000023039 Grik2 (ENSJJAG00000019973) ENSJJAG00000009659 Ascc3 (ENSJJAG00000022570) ENSJJAG00000018345 Prdm13 (ENSJJAG00000017076) ENSJJAG00000014057 ENSJJAG00000011362 ENSJJAG00000012978 ENSJJAG00000006075 Usp45 (ENSJJAG00000014836) ENSJJAG00000010604 ENSJJAG00000022314 ENSJJAG00000021880 Kangaroo rat MODERN SPECIES 381 ENSDORG00000030234 ENSDORG00000023606 Pdss2 (ENSDORG00000001388) #7 Bend3 (ENSDORG00000013215) #8 Mtres1 (ENSDORG00000014894) #9 ENSDORG00000024012 #10 Qrsl1 (ENSDORG00000007837) #12 Rtn4ip1 (ENSDORG00000007834) #13 ENSDORG00000015211 #14 ENSDORG00000024871 #16 Prdm1 (ENSDORG00000014237) #17 Prep (ENSDORG00000001108) #18 Popdc3 (ENSDORG00000024694) #19 Bves (ENSDORG00000006341) #20 ENSDORG00000009587 #21 Hace1 (ENSDORG00000012054) #22 Grik2 (ENSDORG00000015175) Ascc3 (ENSDORG00000008572) Sim1 (ENSDORG00000029337) ENSDORG00000010276 Prdm13 (ENSDORG00000026728) ENSDORG00000008393 Usp45 (ENSDORG00000009273) ENSDORG00000003696 ENSDORG00000029441 ENSDORG00000023456 Faxc (ENSDORG00000013228) ENSDORG00000015241 ENSDORG00000027306 ENSDORG00000024024 ENSDORG00000009188 Rodentia_A ANCESTRAL SPECIES 8 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 Sciuridae ANCESTRAL SPECIES 1 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719.t ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 Marmotini ANCESTRAL SPECIES 11 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.u.a.b #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00390000016836.b.d ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719.t ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 Marmotini_b ANCESTRAL SPECIES 86 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.u.a.b #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00390000016836.b.d Arctic ground squirrel MODERN SPECIES 70 PDSS2 (ENSUPAG00010011770) #7 MTRES1 (ENSUPAG00010011795) #9 ENSUPAG00010011806 #10 ENSUPAG00010011822 QRSL1 (ENSUPAG00010011831) #12 RTN4IP1 (ENSUPAG00010011859) #13 CRYBG1 (ENSUPAG00010011893) #14 ENSUPAG00010012436 ATG5 (ENSUPAG00010012440) #16 PRDM1 (ENSUPAG00010012448) #17 PREP (ENSUPAG00010012470) #18 POPDC3 (ENSUPAG00010012491) #19 BVES (ENSUPAG00010012511) #20 ENSUPAG00010012519 LIN28B (ENSUPAG00010012532) #21 HACE1 (ENSUPAG00010012542) #22 ENSUPAG00010012620 Squirrel MODERN SPECIES 164 SCML4 (ENSSTOG00000004682) SOBP (ENSSTOG00000025137) PDSS2 (ENSSTOG00000015790) #7 BEND3 (ENSSTOG00000026766) #8 MTRES1 (ENSSTOG00000015779) #9 ENSSTOG00000030850 #10 QRSL1 (ENSSTOG00000009177) #12 RTN4IP1 (ENSSTOG00000009165) #13 CRYBG1 (ENSSTOG00000026542) #14 ATG5 (ENSSTOG00000016507) #16 PRDM1 (ENSSTOG00000016505) #17 PREP (ENSSTOG00000023845) #18 POPDC3 (ENSSTOG00000003846) #19 BVES (ENSSTOG00000003822) #20 LIN28B (ENSSTOG00000002692) #21 HACE1 (ENSSTOG00000028610) #22 ENSSTOG00000025714 Alpin marmot MODERN SPECIES 2 SCML4 (ENSMMMG00000013821) PDSS2 (ENSMMMG00000013802) #7 BEND3 (ENSMMMG00000013770) #8 MTRES1 (ENSMMMG00000013762) #9 ENSMMMG00000013748 #10 QRSL1 (ENSMMMG00000013712) #12 RTN4IP1 (ENSMMMG00000013695) #13 ENSMMMG00000013691 CRYBG1 (ENSMMMG00000012703) #14 ATG5 (ENSMMMG00000012672) #16 PRDM1 (ENSMMMG00000012643) #17 PREP (ENSMMMG00000012625) #18 POPDC3 (ENSMMMG00000012617) #19 BVES (ENSMMMG00000012613) #20 ENSMMMG00000012601 HACE1 (ENSMMMG00000012570) #22 ENSMMMG00000012563 ENSMMMG00000012557 ENSMMMG00000012550 ENSMMMG00000012539 ENSMMMG00000012534 ENSMMMG00000012532 GRIK2 (ENSMMMG00000012043) ENSMMMG00000012023 ENSMMMG00000012017 #10 ASCC3 (ENSMMMG00000011942) SIM1 (ENSMMMG00000011921) MCHR2 (ENSMMMG00000011867) PRDM13 (ENSMMMG00000011858) CCNC (ENSMMMG00000011675) ENSMMMG00000011672 Eurasian red squirrel MODERN SPECIES 16 PDSS2 (ENSSVLG00005007210) #7 BEND3 (ENSSVLG00005007266) #8 MTRES1 (ENSSVLG00005007294) #9 ENSSVLG00005007327 QRSL1 (ENSSVLG00005007356) #12 RTN4IP1 (ENSSVLG00005007400) #13 CRYBG1 (ENSSVLG00005007465) #14 ENSSVLG00005007633 ATG5 (ENSSVLG00005007670) #16 PRDM1 (ENSSVLG00005007837) #17 PREP (ENSSVLG00005007952) #18 POPDC3 (ENSSVLG00005007986) #19 BVES (ENSSVLG00005008016) #20 ENSSVLG00005008028 LIN28B (ENSSVLG00005008061) #21 HACE1 (ENSSVLG00005008141) #22 ENSSVLG00005008208 GRIK2 (ENSSVLG00005008323) ASCC3 (ENSSVLG00005008896) ENSSVLG00005008950 SIM1 (ENSSVLG00005008980) MCHR2 (ENSSVLG00005009070) PRDM13 (ENSSVLG00005009125) ENSSVLG00005009236 ENSSVLG00005009650 ENSSVLG00005009671 ENSSVLG00005009751 PNISR (ENSSVLG00005009775) ENSSVLG00005009809 FAXC (ENSSVLG00005009848) ENSSVLG00005009888 Hystricomorpha ANCESTRAL SPECIES 41 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 ENSGT00390000001627 Naked mole-rat female MODERN SPECIES 2 SCEL (ENSHGLG00000010544) MYCBP2 (ENSHGLG00000006408) ENSHGLG00000048947 FBXL3 (ENSHGLG00000004245) CLN5 (ENSHGLG00000005042) ENSHGLG00000006432 ACOD1 (ENSHGLG00000045158) ENSHGLG00000020812 KCTD12 (ENSHGLG00000044311) ENSHGLG00000047148 ENSHGLG00000032347 LMO7 (ENSHGLG00000003836) ENSHGLG00000005038 COMMD6 (ENSHGLG00000042434) ENSHGLG00000003893 ENSHGLG00000006079 #22 ENSHGLG00000005058 ENSHGLG00000004170 KLF5 (ENSHGLG00000005790) ENSHGLG00000004652 PIBF1 (ENSHGLG00000007841) DIS3 (ENSHGLG00000013785) BORA (ENSHGLG00000013729) ENSHGLG00000005241 ENSHGLG00000040800 DACH1 (ENSHGLG00000005419) ENSHGLG00000008697 ENSHGLG00000005289 ENSHGLG00000041967 ENSHGLG00000044079 ENSHGLG00000004996 Hystricomorpha_a ANCESTRAL SPECIES 46 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 ENSGT00390000001627 Hystricomorpha_b ANCESTRAL SPECIES 41 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 ENSGT00390000001627 Long-tailed chinchilla MODERN SPECIES 118 SCML4 (ENSCLAG00000009941) SOBP (ENSCLAG00000009567) PDSS2 (ENSCLAG00000011033) #7 BEND3 (ENSCLAG00000009701) #8 MTRES1 (ENSCLAG00000017356) #9 CD24 (ENSCLAG00000011622) #10 QRSL1 (ENSCLAG00000017367) #12 RTN4IP1 (ENSCLAG00000014920) #13 CRYBG1 (ENSCLAG00000009357) #14 ATG5 (ENSCLAG00000012682) #16 PRDM1 (ENSCLAG00000011847) #17 PREP (ENSCLAG00000014176) #18 POPDC3 (ENSCLAG00000011005) #19 BVES (ENSCLAG00000010963) #20 LIN28B (ENSCLAG00000010534) #21 HACE1 (ENSCLAG00000016992) #22 GRIK2 (ENSCLAG00000011506) ASCC3 (ENSCLAG00000009794) ENSCLAG00000014247 SIM1 (ENSCLAG00000016085) PRDM13 (ENSCLAG00000010966) CCNC (ENSCLAG00000011657) ENSCLAG00000013053 USP45 (ENSCLAG00000009237) PNISR (ENSCLAG00000013308) ENSCLAG00000014198 FAXC (ENSCLAG00000011371) FBXL4 (ENSCLAG00000011157) POU3F2 (ENSCLAG00000009397) MMS22L (ENSCLAG00000013729) KLHL32 (ENSCLAG00000015943) Degu MODERN SPECIES 131 ENSODEG00000013192 ENSODEG00000014020 ENSODEG00000014646 QRSL1 (ENSODEG00000012491) #12 RTN4IP1 (ENSODEG00000012956) #13 CRYBG1 (ENSODEG00000013511) #14 ATG5 (ENSODEG00000012332) #16 PRDM1 (ENSODEG00000012678) #17 ENSODEG00000013137 ENSODEG00000020071 PREP (ENSODEG00000013267) #18 POPDC3 (ENSODEG00000013364) #19 BVES (ENSODEG00000015671) #20 ENSODEG00000012968 LIN28B (ENSODEG00000013568) #21 HACE1 (ENSODEG00000012251) #22 ENSODEG00000013727 GRIK2 (ENSODEG00000013260) Guinea pig MODERN SPECIES 63 SEC63 (ENSCPOG00000002486) SCML4 (ENSCPOG00000012909) SOBP (ENSCPOG00000012904) PDSS2 (ENSCPOG00000009293) #7 BEND3 (ENSCPOG00000036541) #8 MTRES1 (ENSCPOG00000003134) #9 QRSL1 (ENSCPOG00000021670) #12 RTN4IP1 (ENSCPOG00000007055) #13 ENSCPOG00000003512 #14 ATG5 (ENSCPOG00000014065) #16 PRDM1 (ENSCPOG00000014064) #17 PREP (ENSCPOG00000012377) #18 POPDC3 (ENSCPOG00000040175) #19 BVES (ENSCPOG00000034314) #20 LIN28B (ENSCPOG00000006178) #21 HACE1 (ENSCPOG00000001068) #22 GRIK2 (ENSCPOG00000001674) ASCC3 (ENSCPOG00000013989) SIM1 (ENSCPOG00000013987) Lagomorpha ANCESTRAL SPECIES 2 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00390000011769 ENSGT00940000157179 ENSGT00390000001627 Rabbit DUPLICATION Rabbit MODERN SPECIES 3 ENSOCUG00000030811 PDSS2 (ENSOCUG00000011259) #7 BEND3 (ENSOCUG00000011254) #8 ENSOCUG00000030127 MTRES1 (ENSOCUG00000011248) #9 QRSL1 (ENSOCUG00000028175) #12 CRYBG1 (ENSOCUG00000013366) #14 ENSOCUG00000033572 RTN4IP1 (ENSOCUG00000013383) #13 ATG5 (ENSOCUG00000013358) #16 PRDM1 (ENSOCUG00000015495) #17 PREP (ENSOCUG00000000188) #18 POPDC3 (ENSOCUG00000025973) #19 BVES (ENSOCUG00000016944) #20 LIN28B (ENSOCUG00000017850) #21 ENSOCUG00000037658 #22 ENSOCUG00000036629 ENSOCUG00000000909 #22 ENSOCUG00000001388 ENSOCUG00000022257 ENSOCUG00000021731 ENSOCUG00000021456 GRIK2 (ENSOCUG00000003845) ASCC3 (ENSOCUG00000002766) SIM1 (ENSOCUG00000002759) ENSOCUG00000037630 ENSOCUG00000032341 ENSOCUG00000037550 PRDM13 (ENSOCUG00000003216) CCNC (ENSOCUG00000003309) ENSOCUG00000022637 Rabbit MODERN SPECIES 3 BEND3 (ENSOCUG00000011254) #8 ENSOCUG00000030127 MTRES1 (ENSOCUG00000011248) #9 QRSL1 (ENSOCUG00000028175) #12 CRYBG1 (ENSOCUG00000013366) #14 ENSOCUG00000033572 RTN4IP1 (ENSOCUG00000013383) #13 ATG5 (ENSOCUG00000013358) #16 PRDM1 (ENSOCUG00000015495) #17 PREP (ENSOCUG00000000188) #18 POPDC3 (ENSOCUG00000025973) #19 BVES (ENSOCUG00000016944) #20 LIN28B (ENSOCUG00000017850) #21 ENSOCUG00000037658 #22 ENSOCUG00000036629 ENSOCUG00000000909 #22 ENSOCUG00000001388 ENSOCUG00000022257 ENSOCUG00000021731 ENSOCUG00000021456 GRIK2 (ENSOCUG00000003845) ASCC3 (ENSOCUG00000002766) SIM1 (ENSOCUG00000002759) ENSOCUG00000037630 ENSOCUG00000032341 ENSOCUG00000037550 PRDM13 (ENSOCUG00000003216) CCNC (ENSOCUG00000003309) ENSOCUG00000022637 USP45 (ENSOCUG00000009234) ENSOCUG00000036568 Pika MODERN SPECIES 5049 ENSOPRG00000002874 #22 Tree shrew MODERN SPECIES 5734 BVES (ENSTBEG00000005926) #20 LIN28B (ENSTBEG00000005872) #21 HACE1 (ENSTBEG00000005351) #22 Primates ANCESTRAL SPECIES 5 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00910000147275 ENSGT00940000162208 Haplorrhini ANCESTRAL SPECIES 2 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.z #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00950000186448 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00910000147275 ENSGT00940000162208 Simiiformes ANCESTRAL SPECIES 5 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.c.a #9 ENSGT00390000018829.z #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00950000186448 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000155828.o.a ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00910000147275 Catarrhini ANCESTRAL SPECIES 5 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.c.a #9 ENSGT00390000018829.z #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00950000186448 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000154552.b.g.b ENSGT00940000156143 ENSGT00940000155828.o.a ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 Hominoidea ANCESTRAL SPECIES 4 ENSGT00910000147202 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.c.a #9 ENSGT00390000018829.y.b #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b.a #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000154552.b.g.b ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 Hominidae ANCESTRAL SPECIES 5 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.c.a #9 ENSGT00390000018829.y.b #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b.a #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000154552.b.g.b ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.c.a #9 ENSGT00390000018829.y.b #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b.a #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000154552.b.g.b ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.c.a #9 ENSGT00390000018829.y.b #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b.a #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000154552.b.g.b ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 Pan ANCESTRAL SPECIES 5 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.c.a #9 ENSGT00940000167536 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b.a #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000154552.b.g.b ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000155342.k.a.b Bonobo MODERN SPECIES 19 SCML4 (ENSPPAG00000020145) SOBP (ENSPPAG00000037988) PDSS2 (ENSPPAG00000035956) #7 BEND3 (ENSPPAG00000039227) #8 MTRES1 (ENSPPAG00000032445) #9 ENSPPAG00000028244 QRSL1 (ENSPPAG00000030790) #12 RTN4IP1 (ENSPPAG00000031639) #13 CRYBG1 (ENSPPAG00000030684) #14 ATG5 (ENSPPAG00000040499) #16 PRDM1 (ENSPPAG00000025287) #17 PREP (ENSPPAG00000014953) #18 POPDC3 (ENSPPAG00000031101) #19 BVES (ENSPPAG00000036836) #20 LIN28B (ENSPPAG00000038725) #21 HACE1 (ENSPPAG00000043105) #22 GRIK2 (ENSPPAG00000037072) ASCC3 (ENSPPAG00000030772) SIM1 (ENSPPAG00000009797) MCHR2 (ENSPPAG00000029322) PRDM13 (ENSPPAG00000041894) CCNC (ENSPPAG00000028772) TSTD3 (ENSPPAG00000032827) USP45 (ENSPPAG00000034506) ENSPPAG00000029781 PNISR (ENSPPAG00000027087) COQ3 (ENSPPAG00000000909) FAXC (ENSPPAG00000040951) ENSPPAG00000038020 FBXL4 (ENSPPAG00000031572) ENSPPAG00000038670 Chimpanzee MODERN SPECIES 19 SCML4 (ENSPTRG00000018469) SOBP (ENSPTRG00000018467) PDSS2 (ENSPTRG00000018466) #7 BEND3 (ENSPTRG00000018465) #8 MTRES1 (ENSPTRG00000018464) #9 ENSPTRG00000042685 QRSL1 (ENSPTRG00000018462) #12 RTN4IP1 (ENSPTRG00000018461) #13 CRYBG1 (ENSPTRG00000018459) #14 PRDM1 (ENSPTRG00000018457) #17 ATG5 (ENSPTRG00000018458) #16 PREP (ENSPTRG00000018456) #18 POPDC3 (ENSPTRG00000018455) #19 BVES (ENSPTRG00000018454) #20 LIN28B (ENSPTRG00000018453) #21 HACE1 (ENSPTRG00000018451) #22 GRIK2 (ENSPTRG00000018449) ENSPTRG00000047929 ASCC3 (ENSPTRG00000018448) SIM1 (ENSPTRG00000018447) MCHR2 (ENSPTRG00000018446) PRDM13 (ENSPTRG00000018445) CCNC (ENSPTRG00000018444) TSTD3 (ENSPTRG00000052330) USP45 (ENSPTRG00000018443) ENSPTRG00000045943 PNISR (ENSPTRG00000018442) COQ3 (ENSPTRG00000018441) FAXC (ENSPTRG00000018440) FBXL4 (ENSPTRG00000018438) MMS22L (ENSPTRG00000018437) Human MODERN SPECIES 18 SCML4 (ENSG00000146285) SOBP (ENSG00000112320) PDSS2 (ENSG00000164494) #7 BEND3 (ENSG00000178409) #8 MTRES1 (ENSG00000130349) #9 CD24 (ENSG00000272398) #10 QRSL1 (ENSG00000130348) #12 RTN4IP1 (ENSG00000130347) #13 CRYBG1 (ENSG00000112297) #14 ATG5 (ENSG00000057663) #16 PRDM1 (ENSG00000057657) #17 PREP (ENSG00000085377) #18 POPDC3 (ENSG00000132429) #19 BVES (ENSG00000112276) #20 LIN28B (ENSG00000187772) #21 HACE1 (ENSG00000085382) #22 GRIK2 (ENSG00000164418) ASCC3 (ENSG00000112249) SIM1 (ENSG00000112246) MCHR2 (ENSG00000152034) PRDM13 (ENSG00000112238) CCNC (ENSG00000112237) TSTD3 (ENSG00000279170) USP45 (ENSG00000123552) PNISR (ENSG00000132424) COQ3 (ENSG00000132423) FAXC (ENSG00000146267) FBXL4 (ENSG00000112234) POU3F2 (ENSG00000184486) MMS22L (ENSG00000146263) KLHL32 (ENSG00000186231) Gorilla MODERN SPECIES 19 SEC63 (ENSGGOG00000002560) SCML4 (ENSGGOG00000006782) SOBP (ENSGGOG00000015284) PDSS2 (ENSGGOG00000040827) #7 BEND3 (ENSGGOG00000005456) #8 MTRES1 (ENSGGOG00000006113) #9 QRSL1 (ENSGGOG00000008261) #12 RTN4IP1 (ENSGGOG00000008254) #13 CRYBG1 (ENSGGOG00000016733) #14 PRDM1 (ENSGGOG00000001929) #17 ATG5 (ENSGGOG00000016633) #16 PREP (ENSGGOG00000017196) #18 POPDC3 (ENSGGOG00000017179) #19 BVES (ENSGGOG00000026505) #20 LIN28B (ENSGGOG00000015437) #21 HACE1 (ENSGGOG00000008591) #22 ENSGGOG00000043856 GRIK2 (ENSGGOG00000000114) ASCC3 (ENSGGOG00000002790) SIM1 (ENSGGOG00000017108) MCHR2 (ENSGGOG00000017182) PRDM13 (ENSGGOG00000006947) CCNC (ENSGGOG00000007422) ENSGGOG00000022586 USP45 (ENSGGOG00000000091) ENSGGOG00000036723 PNISR (ENSGGOG00000012944) COQ3 (ENSGGOG00000006696) FAXC (ENSGGOG00000044046) ENSGGOG00000041376 FBXL4 (ENSGGOG00000001187) Orangutan MODERN SPECIES 19 SOBP (ENSPPYG00000016889) PDSS2 (ENSPPYG00000016887) #7 BEND3 (ENSPPYG00000016886) #8 MTRES1 (ENSPPYG00000016885) #9 CD24 (ENSPPYG00000016884) #10 ENSPPYG00000016334 QRSL1 (ENSPPYG00000016883) #12 RTN4IP1 (ENSPPYG00000016882) #13 CRYBG1 (ENSPPYG00000016881) #14 PRDM1 (ENSPPYG00000016879) #17 ATG5 (ENSPPYG00000016880) #16 PREP (ENSPPYG00000029726) #18 POPDC3 (ENSPPYG00000016878) #19 BVES (ENSPPYG00000016876) #20 LIN28B (ENSPPYG00000031457) #21 HACE1 (ENSPPYG00000016873) #22 GRIK2 (ENSPPYG00000016870) ASCC3 (ENSPPYG00000016869) SIM1 (ENSPPYG00000016868) MCHR2 (ENSPPYG00000016867) PRDM13 (ENSPPYG00000016866) CCNC (ENSPPYG00000016865) ENSPPYG00000040827 USP45 (ENSPPYG00000016864) PNISR (ENSPPYG00000025884) COQ3 (ENSPPYG00000016863) FAXC (ENSPPYG00000016862) FBXL4 (ENSPPYG00000016861) POU3F2 (ENSPPYG00000016860) MMS22L (ENSPPYG00000016859) KLHL32 (ENSPPYG00000016858) Gibbon MODERN SPECIES 18 SCML4 (ENSNLEG00000013516) ENSNLEG00000027102 SOBP (ENSNLEG00000013498) PDSS2 (ENSNLEG00000013484) #7 BEND3 (ENSNLEG00000013464) #8 MTRES1 (ENSNLEG00000013450) #9 QRSL1 (ENSNLEG00000013383) #12 RTN4IP1 (ENSNLEG00000013349) #13 CRYBG1 (ENSNLEG00000013318) #14 PRDM1 (ENSNLEG00000013211) #17 ATG5 (ENSNLEG00000013268) #16 PREP (ENSNLEG00000014171) #18 POPDC3 (ENSNLEG00000014163) #19 BVES (ENSNLEG00000014155) #20 LIN28B (ENSNLEG00000014146) #21 HACE1 (ENSNLEG00000014061) #22 GRIK2 (ENSNLEG00000013983) ENSNLEG00000013981 ASCC3 (ENSNLEG00000013890) SIM1 (ENSNLEG00000013870) MCHR2 (ENSNLEG00000013852) PRDM13 (ENSNLEG00000013845) CCNC (ENSNLEG00000013796) ENSNLEG00000027493 USP45 (ENSNLEG00000013744) ENSNLEG00000034852 PNISR (ENSNLEG00000013690) COQ3 (ENSNLEG00000013664) FAXC (ENSNLEG00000030205) FBXL4 (ENSNLEG00000013629) ENSNLEG00000027712 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.c.a #9 ENSGT00390000018829.z #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00950000186448 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00910000147706 ENSGT00940000155377 ENSGT00940000154552.b.g.b ENSGT00940000156143 ENSGT00940000155828.o.a ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.c.a.a #9 ENSGT00390000018829.z #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00950000186448 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00910000147706 ENSGT00940000155377 ENSGT00940000154552.b.g.b ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.c.a.a #9 ENSGT00390000018829.z #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00950000186448 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00550000074968.b ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00910000147706 ENSGT00940000155377 ENSGT00940000154552.b.g.b ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00390000008610.a.b.a.a.a.t.h.b ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A Macaca ANCESTRAL SPECIES 9 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.c.a.a #9 ENSGT00390000018829.z #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00950000186448 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00550000074968.b ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00910000147706 ENSGT00940000155377 ENSGT00940000154552.b.g.b ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00390000008610.a.b.a.a.a.t.h.b ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A Pig-tailed macaque MODERN SPECIES 553 BEND3 (ENSMNEG00000036299) #8 ENSMNEG00000028746 #9 ENSMNEG00000034018 #10 ENSMNEG00000043762 ENSMNEG00000039721 QRSL1 (ENSMNEG00000039617) #12 RTN4IP1 (ENSMNEG00000045014) #13 CRYBG1 (ENSMNEG00000033538) #14 ATG5 (ENSMNEG00000032866) #16 PRDM1 (ENSMNEG00000032369) #17 ENSMNEG00000045422 PREP (ENSMNEG00000043839) #18 POPDC3 (ENSMNEG00000014319) #19 BVES (ENSMNEG00000033730) #20 LIN28B (ENSMNEG00000038148) #21 HACE1 (ENSMNEG00000030441) #22 GRIK2 (ENSMNEG00000030199) Macaca_a ANCESTRAL SPECIES 9 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.c.a.a #9 ENSGT00390000018829.z #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00950000186448 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT01100000263493.a.b.a.b.a.b.a.b.b.b.b ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00390000008610.a.b.a.a.a.t.h.b ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 Crab-eating macaque MODERN SPECIES 14 SOBP (ENSMFAG00000031853) PDSS2 (ENSMFAG00000031137) #7 BEND3 (ENSMFAG00000043850) #8 ENSMFAG00000034144 #9 ENSMFAG00000064133 #10 ENSMFAG00000037584 RTN4IP1 (ENSMFAG00000045409) #13 CRYBG1 (ENSMFAG00000038353) #14 ENSMFAG00000051465 ATG5 (ENSMFAG00000041362) #16 PRDM1 (ENSMFAG00000037637) #17 PREP (ENSMFAG00000038505) #18 POPDC3 (ENSMFAG00000040532) #19 BVES (ENSMFAG00000045432) #20 LIN28B (ENSMFAG00000065717) #21 HACE1 (ENSMFAG00000039999) #22 ENSMFAG00000052218 ENSMFAG00000064569 ENSMFAG00000000351 GRIK2 (ENSMFAG00000040349) ENSMFAG00000062609 ASCC3 (ENSMFAG00000002081) ENSMFAG00000061583 SIM1 (ENSMFAG00000002878) MCHR2 (ENSMFAG00000040175) ENSMFAG00000049964 PRDM13 (ENSMFAG00000064719) ENSMFAG00000001955 CCNC (ENSMFAG00000030903) TSTD3 (ENSMFAG00000042059) USP45 (ENSMFAG00000038745) Rhesus MODERN SPECIES 14 SCML4 (ENSMMUG00000014936) SOBP (ENSMMUG00000022950) PDSS2 (ENSMMUG00000002271) #7 BEND3 (ENSMMUG00000052231) #8 MTRES1 (ENSMMUG00000050334) #9 ENSMMUG00000056792 #10 QRSL1 (ENSMMUG00000008330) #12 RTN4IP1 (ENSMMUG00000008121) #13 CRYBG1 (ENSMMUG00000008120) #14 ATG5 (ENSMMUG00000019679) #16 PRDM1 (ENSMMUG00000021401) #17 PREP (ENSMMUG00000013483) #18 POPDC3 (ENSMMUG00000014473) #19 BVES (ENSMMUG00000014471) #20 LIN28B (ENSMMUG00000064609) #21 HACE1 (ENSMMUG00000014703) #22 ENSMMUG00000055978 GRIK2 (ENSMMUG00000009856) ENSMMUG00000049806 ASCC3 (ENSMMUG00000022287) ENSMMUG00000062661 SIM1 (ENSMMUG00000022285) MCHR2 (ENSMMUG00000000808) PRDM13 (ENSMMUG00000048121) CCNC (ENSMMUG00000004061) TSTD3 (ENSMMUG00000054128) USP45 (ENSMMUG00000005929) PNISR (ENSMMUG00000005925) COQ3 (ENSMMUG00000050740) FAXC (ENSMMUG00000005923) FBXL4 (ENSMMUG00000001659) Cercopithecinae_b ANCESTRAL SPECIES 17 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.c.a.a #9 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00950000186448 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00550000074968.b ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00910000147706 ENSGT00940000155377 ENSGT00940000154552.b.g.b ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00390000008610.a.b.a.a.a.t.h.b ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A Olive baboon MODERN SPECIES 16 ENSPANG00000040240 #10 ENSPANG00000049765 ENSPANG00000041919 ENSPANG00000044349 QRSL1 (ENSPANG00000016880) #12 RTN4IP1 (ENSPANG00000008266) #13 CRYBG1 (ENSPANG00000021647) #14 PRDM1 (ENSPANG00000050119) #17 ATG5 (ENSPANG00000025450) #16 ENSPANG00000046918 PREP (ENSPANG00000015134) #18 POPDC3 (ENSPANG00000010757) #19 BVES (ENSPANG00000008149) #20 ENSPANG00000037832 LIN28B (ENSPANG00000032324) #21 HACE1 (ENSPANG00000000648) #22 ENSPANG00000029476 ENSPANG00000050251 ENSPANG00000032897 GRIK2 (ENSPANG00000006097) ASCC3 (ENSPANG00000006307) SIM1 (ENSPANG00000011218) ENSPANG00000042982 ENSPANG00000047035 MCHR2 (ENSPANG00000006099) PRDM13 (ENSPANG00000017638) CCNC (ENSPANG00000010898) USP45 (ENSPANG00000018342) PNISR (ENSPANG00000022195) COQ3 (ENSPANG00000020865) FAXC (ENSPANG00000011254) Cercopithecinae_d ANCESTRAL SPECIES 35 ENSGT00390000010827 #8 ENSGT00390000009366.c.a.a #9 ENSGT00940000167536 ENSGT00390000018318.u.b.a.b.a.a.a ENSGT00550000074866.i #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00950000186448 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00550000074968.b ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00910000147706 ENSGT00940000155377 ENSGT00940000154552.b.g.b ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00390000008610.a.b.a.a.a.t.h.b ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A Sooty mangabey MODERN SPECIES 139 BEND3 (ENSCATG00000044885) #8 ENSCATG00000000450 #9 ENSCATG00000030902 ENSCATG00000031493 ENSCATG00000041315 QRSL1 (ENSCATG00000041686) #12 RTN4IP1 (ENSCATG00000045221) #13 CRYBG1 (ENSCATG00000030957) #14 ATG5 (ENSCATG00000032926) #16 PRDM1 (ENSCATG00000029610) #17 ENSCATG00000003731 PREP (ENSCATG00000029835) #18 POPDC3 (ENSCATG00000018981) #19 BVES (ENSCATG00000037642) #20 LIN28B (ENSCATG00000037900) #21 HACE1 (ENSCATG00000011353) #22 ENSCATG00000031343 GRIK2 (ENSCATG00000030553) ENSCATG00000012149 ASCC3 (ENSCATG00000011281) ENSCATG00000045106 SIM1 (ENSCATG00000003305) MCHR2 (ENSCATG00000041382) PRDM13 (ENSCATG00000041563) ENSCATG00000041886 CCNC (ENSCATG00000042868) ENSCATG00000029496 USP45 (ENSCATG00000034256) ENSCATG00000036657 PNISR (ENSCATG00000012848) COQ3 (ENSCATG00000009558) Drill MODERN SPECIES 1193 CRYBG1 (ENSMLEG00000028621) #14 ENSMLEG00000030488 ATG5 (ENSMLEG00000034426) #16 PRDM1 (ENSMLEG00000034606) #17 ENSMLEG00000034791 PREP (ENSMLEG00000027120) #18 POPDC3 (ENSMLEG00000027978) #19 BVES (ENSMLEG00000028450) #20 LIN28B (ENSMLEG00000028886) #21 HACE1 (ENSMLEG00000030954) #22 Vervet Monkey MODERN SPECIES 4 SOBP (ENSCSAG00000014908) ENSCSAG00000014888 PDSS2 (ENSCSAG00000014881) #7 BEND3 (ENSCSAG00000014875) #8 MTRES1 (ENSCSAG00000014865) #9 QRSL1 (ENSCSAG00000014852) #12 RTN4IP1 (ENSCSAG00000014845) #13 CRYBG1 (ENSCSAG00000014817) #14 ENSCSAG00000014764 ATG5 (ENSCSAG00000014751) #16 PRDM1 (ENSCSAG00000014744) #17 PREP (ENSCSAG00000014741) #18 POPDC3 (ENSCSAG00000014725) #19 BVES (ENSCSAG00000014711) #20 LIN28B (ENSCSAG00000014708) #21 HACE1 (ENSCSAG00000014704) #22 ENSCSAG00000014695 ENSCSAG00000018976 ENSCSAG00000018977 GRIK2 (ENSCSAG00000014687) ASCC3 (ENSCSAG00000014674) SIM1 (ENSCSAG00000014652) MCHR2 (ENSCSAG00000014637) PRDM13 (ENSCSAG00000014622) CCNC (ENSCSAG00000014617) USP45 (ENSCSAG00000014609) PNISR (ENSCSAG00000014595) COQ3 (ENSCSAG00000014581) FAXC (ENSCSAG00000014566) FBXL4 (ENSCSAG00000014559) POU3F2 (ENSCSAG00000018978) Rhinopithecus ANCESTRAL SPECIES 410 ENSGT00390000010827 #8 ENSGT00390000009366.c.a #9 ENSGT00390000018829.z #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 Golden snub-nosed monkey MODERN SPECIES 2751 MTRES1 (ENSRROG00000040129) #9 ENSRROG00000042509 ENSRROG00000029389 #10 QRSL1 (ENSRROG00000032313) #12 RTN4IP1 (ENSRROG00000035214) #13 CRYBG1 (ENSRROG00000040025) #14 ATG5 (ENSRROG00000042638) #16 PRDM1 (ENSRROG00000033032) #17 PREP (ENSRROG00000040583) #18 POPDC3 (ENSRROG00000007778) #19 BVES (ENSRROG00000039288) #20 LIN28B (ENSRROG00000033602) #21 HACE1 (ENSRROG00000042251) #22 ENSRROG00000041936 Black snub-nosed monkey MODERN SPECIES 603 BEND3 (ENSRBIG00000039549) #8 MTRES1 (ENSRBIG00000039230) #9 QRSL1 (ENSRBIG00000032483) #12 RTN4IP1 (ENSRBIG00000039752) #13 CRYBG1 (ENSRBIG00000038062) #14 PRDM1 (ENSRBIG00000028814) #17 ATG5 (ENSRBIG00000012052) #16 PREP (ENSRBIG00000029077) #18 POPDC3 (ENSRBIG00000038611) #19 BVES (ENSRBIG00000033098) #20 LIN28B (ENSRBIG00000036241) #21 HACE1 (ENSRBIG00000034229) #22 Platyrrhini ANCESTRAL SPECIES 2 ENSGT00910000147202 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.d #9 ENSGT00390000018829.z #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b.a #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000154552.b.e.b ENSGT00940000156143 ENSGT00940000155828.o.a ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625.bb ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 Cebidae ANCESTRAL SPECIES 5 ENSGT00910000147202 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.d #9 ENSGT00390000018829.y.a.a #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b.a #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000155828.o.a ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625.bb ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00910000147275 Marmoset MODERN SPECIES 16 QRSL1 (ENSCJAG00000006200) #12 RTN4IP1 (ENSCJAG00000006218) #13 ENSCJAG00000079990 CRYBG1 (ENSCJAG00000006246) #14 ENSCJAG00000074624 PRDM1 (ENSCJAG00000006332) #17 ENSCJAG00000079207 ATG5 (ENSCJAG00000006306) #16 ENSCJAG00000085831 ENSCJAG00000074740 PREP (ENSCJAG00000001710) #18 ENSCJAG00000071190 POPDC3 (ENSCJAG00000001700) #19 BVES (ENSCJAG00000001683) #20 LIN28B (ENSCJAG00000001671) #21 HACE1 (ENSCJAG00000001597) #22 ENSCJAG00000062395 ENSCJAG00000073079 GRIK2 (ENSCJAG00000001552) ENSCJAG00000001550 ASCC3 (ENSCJAG00000001507) SIM1 (ENSCJAG00000001495) MCHR2 (ENSCJAG00000001474) ENSCJAG00000070960 PRDM13 (ENSCJAG00000039816) CCNC (ENSCJAG00000001388) ENSCJAG00000031571 USP45 (ENSCJAG00000001356) PNISR (ENSCJAG00000001335) COQ3 (ENSCJAG00000001326) FAXC (ENSCJAG00000001311) Cebidae_a ANCESTRAL SPECIES 88 ENSGT00910000147202 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366.d #9 ENSGT00390000018829.y.a.a #10 ENSGT00550000074866.i #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b.a #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 Capuchin MODERN SPECIES 160 SEC63 (ENSCCAG00000024413) SCML4 (ENSCCAG00000033652) SOBP (ENSCCAG00000036289) PDSS2 (ENSCCAG00000036171) #7 BEND3 (ENSCCAG00000032949) #8 CD24 (ENSCCAG00000034871) #10 QRSL1 (ENSCCAG00000021243) #12 RTN4IP1 (ENSCCAG00000015806) #13 CRYBG1 (ENSCCAG00000022546) #14 ATG5 (ENSCCAG00000022296) #16 PRDM1 (ENSCCAG00000031062) #17 PREP (ENSCCAG00000033502) #18 POPDC3 (ENSCCAG00000036176) #19 BVES (ENSCCAG00000027637) #20 LIN28B (ENSCCAG00000020904) #21 HACE1 (ENSCCAG00000028892) #22 Bolivian squirrel monkey MODERN SPECIES 121 SOBP (ENSSBOG00000031278) PDSS2 (ENSSBOG00000021644) #7 ENSSBOG00000029782 #8 MTRES1 (ENSSBOG00000020668) #9 ENSSBOG00000034823 ENSSBOG00000032630 QRSL1 (ENSSBOG00000022441) #12 RTN4IP1 (ENSSBOG00000027877) #13 CRYBG1 (ENSSBOG00000033025) #14 ATG5 (ENSSBOG00000031707) #16 PRDM1 (ENSSBOG00000023139) #17 ENSSBOG00000024567 #18 POPDC3 (ENSSBOG00000025829) #19 BVES (ENSSBOG00000024089) #20 LIN28B (ENSSBOG00000025323) #21 HACE1 (ENSSBOG00000024126) #22 NTNG2 (ENSSBOG00000030323) ENSSBOG00000025878 SETX (ENSSBOG00000028982) TTF1 (ENSSBOG00000034090) CFAP77 (ENSSBOG00000014688) BARHL1 (ENSSBOG00000028564) DDX31 (ENSSBOG00000021668) GTF3C4 (ENSSBOG00000021825) AK8 (ENSSBOG00000024960) SPACA9 (ENSSBOG00000019863) TSC1 (ENSSBOG00000019012) GFI1B (ENSSBOG00000018523) GTF3C5 (ENSSBOG00000022976) CEL (ENSSBOG00000030353) RALGDS (ENSSBOG00000031916) Mas night monkey MODERN SPECIES 478 BEND3 (ENSANAG00000021126) #8 ENSANAG00000037315 #9 ENSANAG00000036990 ENSANAG00000037838 #10 ENSANAG00000003965 #12 RTN4IP1 (ENSANAG00000037479) #13 CRYBG1 (ENSANAG00000023839) #14 ENSANAG00000027713 ATG5 (ENSANAG00000022796) #16 PRDM1 (ENSANAG00000030675) #17 ENSANAG00000024327 ENSANAG00000015673 #18 POPDC3 (ENSANAG00000026735) #19 BVES (ENSANAG00000015115) #20 ENSANAG00000036677 #21 HACE1 (ENSANAG00000037835) #22 ENSANAG00000019962 GRIK2 (ENSANAG00000000802) ASCC3 (ENSANAG00000021476) ENSANAG00000036846 SIM1 (ENSANAG00000028397) ENSANAG00000032603 Tarsier MODERN SPECIES 5998 QRSL1 (ENSTSYG00000013570) #12 RTN4IP1 (ENSTSYG00000013560) #13 CRYBG1 (ENSTSYG00000013530) #14 ENSTSYG00000030548 PRDM1 (ENSTSYG00000011666) #17 ATG5 (ENSTSYG00000007153) #16 PREP (ENSTSYG00000006008) #18 POPDC3 (ENSTSYG00000005861) #19 BVES (ENSTSYG00000006928) #20 LIN28B (ENSTSYG00000006480) #21 HACE1 (ENSTSYG00000014445) #22 MANEA (ENSTSYG00000037154) ENSTSYG00000032792 ENSTSYG00000031008 Strepsirrhini ANCESTRAL SPECIES 7 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 Lemuriformes ANCESTRAL SPECIES 3 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.ab #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 Mouse lemur MODERN SPECIES 28 SOBP (ENSMICG00000030144) PDSS2 (ENSMICG00000032777) #7 BEND3 (ENSMICG00000043137) #8 ENSMICG00000004137 #9 ENSMICG00000011517 #10 ENSMICG00000029426 QRSL1 (ENSMICG00000015754) #12 RTN4IP1 (ENSMICG00000015741) #13 CRYBG1 (ENSMICG00000030885) #14 ATG5 (ENSMICG00000010334) #16 PRDM1 (ENSMICG00000010329) #17 PREP (ENSMICG00000000906) #18 POPDC3 (ENSMICG00000045084) #19 BVES (ENSMICG00000041560) #20 LIN28B (ENSMICG00000047923) #21 HACE1 (ENSMICG00000002280) #22 ENSMICG00000046073 ENSMICG00000048082 ENSMICG00000032724 ENSMICG00000044337 RSPH4A (ENSMICG00000032048) ZUP1 (ENSMICG00000013671) KPNA5 (ENSMICG00000037900) FAM162B (ENSMICG00000032976) GPRC6A (ENSMICG00000047395) ENSMICG00000038117 RFX6 (ENSMICG00000044294) VGLL2 (ENSMICG00000007779) ROS1 (ENSMICG00000007792) DCBLD1 (ENSMICG00000007818) GOPC (ENSMICG00000037737) Lemuriformes_a ANCESTRAL SPECIES 63 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.ab #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 Greater bamboo lemur MODERN SPECIES 187 PDSS2 (ENSPSMG00000003161) #7 ENSPSMG00000003169 BEND3 (ENSPSMG00000003180) #8 MTRES1 (ENSPSMG00000003201) #9 ENSPSMG00000003206 #10 QRSL1 (ENSPSMG00000003285) #12 RTN4IP1 (ENSPSMG00000003357) #13 CRYBG1 (ENSPSMG00000003403) #14 ENSPSMG00000003411 ATG5 (ENSPSMG00000003484) #16 PRDM1 (ENSPSMG00000003598) #17 PREP (ENSPSMG00000003663) #18 POPDC3 (ENSPSMG00000003691) #19 BVES (ENSPSMG00000003702) #20 LIN28B (ENSPSMG00000003723) #21 HACE1 (ENSPSMG00000003828) #22 SOCS6 (ENSPSMG00000003912) RTTN (ENSPSMG00000004198) CD226 (ENSPSMG00000004279) DOK6 (ENSPSMG00000004300) ENSPSMG00000004324 GULP1 (ENSPSMG00000004447) COL3A1 (ENSPSMG00000004515) COL5A2 (ENSPSMG00000004576) WDR75 (ENSPSMG00000004614) SLC40A1 (ENSPSMG00000004638) ASDURF (ENSPSMG00000004645) ASNSD1 (ENSPSMG00000004655) ANKAR (ENSPSMG00000004688) OSGEPL1 (ENSPSMG00000004713) ORMDL1 (ENSPSMG00000004727) Coquerels sifaka MODERN SPECIES 492 SOBP (ENSPCOG00000025980) PDSS2 (ENSPCOG00000005947) #7 BEND3 (ENSPCOG00000017387) #8 ENSPCOG00000027220 #9 CD24 (ENSPCOG00000014613) #10 ENSPCOG00000019397 #12 RTN4IP1 (ENSPCOG00000027386) #13 ENSPCOG00000025469 CRYBG1 (ENSPCOG00000022574) #14 PRDM1 (ENSPCOG00000002322) #17 ATG5 (ENSPCOG00000015617) #16 PREP (ENSPCOG00000018527) #18 POPDC3 (ENSPCOG00000022458) #19 BVES (ENSPCOG00000023354) #20 LIN28B (ENSPCOG00000016875) #21 HACE1 (ENSPCOG00000016340) #22 ENSPCOG00000020641 Bushbaby MODERN SPECIES 117 PDSS2 (ENSOGAG00000006339) #7 BEND3 (ENSOGAG00000027957) #8 MTRES1 (ENSOGAG00000008839) #9 ENSOGAG00000024102 QRSL1 (ENSOGAG00000012707) #12 RTN4IP1 (ENSOGAG00000012703) #13 ENSOGAG00000012697 #14 ENSOGAG00000032847 #14 ATG5 (ENSOGAG00000004787) #16 PRDM1 (ENSOGAG00000014036) #17 PREP (ENSOGAG00000015233) #18 POPDC3 (ENSOGAG00000011048) #19 BVES (ENSOGAG00000011044) #20 ENSOGAG00000029797 LIN28B (ENSOGAG00000011042) #21 HACE1 (ENSOGAG00000011034) #22 Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00910000147275 ENSGT00940000162208 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155839 #22 Common shrew MODERN SPECIES 7004 HACE1 (ENSSARG00000004506) #22 Hedgehog MODERN SPECIES 756 HACE1 (ENSEEUG00000008490) #22 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000164385.a.b ENSGT00910000147275 Artiodactyla ANCESTRAL SPECIES 19 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00950000186448 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164601 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 Suina ANCESTRAL SPECIES 18 ENSGT00940000157463.z ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000164601 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 Chacoan peccary MODERN SPECIES 61 SCML4 (ENSCWAG00000005085) SOBP (ENSCWAG00000005052) PDSS2 (ENSCWAG00000004925) #7 BEND3 (ENSCWAG00000004892) #8 MTRES1 (ENSCWAG00000004864) #9 ENSCWAG00000004851 QRSL1 (ENSCWAG00000019699) #12 RTN4IP1 (ENSCWAG00000019680) #13 CRYBG1 (ENSCWAG00000019206) #14 PRDM1 (ENSCWAG00000019085) #17 ATG5 (ENSCWAG00000018963) #16 PREP (ENSCWAG00000018924) #18 POPDC3 (ENSCWAG00000018902) #19 BVES (ENSCWAG00000018883) #20 LIN28B (ENSCWAG00000018839) #21 HACE1 (ENSCWAG00000018801) #22 GRIK2 (ENSCWAG00000017386) ASCC3 (ENSCWAG00000017256) SIM1 (ENSCWAG00000017181) MCHR2 (ENSCWAG00000017138) PRDM13 (ENSCWAG00000017092) CCNC (ENSCWAG00000016964) TSTD3 (ENSCWAG00000016927) Pig MODERN SPECIES MTRES1 (ENSSSCG00000037985) #9 ENSSSCG00000037071 CD24 (ENSSSCG00000056379) #10 QRSL1 (ENSSSCG00000004374) #12 RTN4IP1 (ENSSSCG00000004373) #13 ENSSSCG00000041504 ENSSSCG00000046528 CRYBG1 (ENSSSCG00000004371) #14 PRDM1 (ENSSSCG00000004369) #17 ATG5 (ENSSSCG00000004370) #16 PREP (ENSSSCG00000004368) #18 ENSSSCG00000045756 POPDC3 (ENSSSCG00000004367) #19 BVES (ENSSSCG00000004366) #20 LIN28B (ENSSSCG00000037612) #21 HACE1 (ENSSSCG00000004364) #22 GRIK2 (ENSSSCG00000004361) ASCC3 (ENSSSCG00000004358) SIM1 (ENSSSCG00000004357) MCHR2 (ENSSSCG00000004356) ENSSSCG00000031854 ENSSSCG00000004355 PRDM13 (ENSSSCG00000004354) CCNC (ENSSSCG00000004353) ENSSSCG00000038757 USP45 (ENSSSCG00000004351) ENSSSCG00000050732 PNISR (ENSSSCG00000037594) COQ3 (ENSSSCG00000004349) FBXL4 (ENSSSCG00000004347) POU3F2 (ENSSSCG00000056101) Artiodactyla_a ANCESTRAL SPECIES 21 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.b #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00410000028929 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164601 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 Artiodactyla_b ANCESTRAL SPECIES 18 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.b #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00410000028929 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164601 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 Cetacea ANCESTRAL SPECIES 18 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.a #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00940000158987.d ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00410000028929 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT01010000228757 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164601 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 Odontoceti ANCESTRAL SPECIES 18 ENSGT00390000009366 #9 ENSGT00390000018829.g.a #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00390000004040.k.b ENSGT00940000154798.a.d.a #17 ENSGT00940000158987.d ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00410000028929 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000164307 ENSGT00940000155610 ENSGT01010000228757 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164601 ENSGT00940000167379 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A Odontoceti_a ANCESTRAL SPECIES 16 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.a #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00940000158987.d ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00410000028929 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000164307 ENSGT00940000155610 ENSGT01010000228757 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164601 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 Dolphin MODERN SPECIES 5236 HACE1 (ENSTTRG00000012846) #22 Odontoceti_b ANCESTRAL SPECIES 18 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.a #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00940000158987.d ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000164307 ENSGT00940000155610 ENSGT01010000228757 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164601 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 Monodontidae ANCESTRAL SPECIES 18 ENSGT00390000010827 #8 ENSGT00390000009366.l.a #9 ENSGT00390000018829.g.a #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004856.w.b ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00940000158987.d ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00390000011943.a.a.a.b.a.a ENSGT01100000263525.a.b.b.c.b ENSGT00940000155610 ENSGT01010000228757 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164601 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 Narwhal MODERN SPECIES 301 ENSMMNG00015010593 #9 ENSMMNG00015010579 #10 QRSL1 (ENSMMNG00015010552) #12 RTN4IP1 (ENSMMNG00015010517) #13 ENSMMNG00015010497 CRYBG1 (ENSMMNG00015010430) #14 ENSMMNG00015010395 ENSMMNG00015010386 PRDM1 (ENSMMNG00015010356) #17 ATG5 (ENSMMNG00015010296) #16 ENSMMNG00015010265 PREP (ENSMMNG00015010230) #18 POPDC3 (ENSMMNG00015010209) #19 BVES (ENSMMNG00015010194) #20 LIN28B (ENSMMNG00015010175) #21 HACE1 (ENSMMNG00015010135) #22 ENSMMNG00015010104 ENSMMNG00015010090 ENSMMNG00015010086 GRIK2 (ENSMMNG00015009912) ENSMMNG00015009869 ASCC3 (ENSMMNG00015009831) SIM1 (ENSMMNG00015009809) MCHR2 (ENSMMNG00015009778) PRDM13 (ENSMMNG00015009755) CCNC (ENSMMNG00015009719) ENSMMNG00015009693 USP45 (ENSMMNG00015009670) PNISR (ENSMMNG00015009651) COQ3 (ENSMMNG00015009635) FAXC (ENSMMNG00015009621) Beluga whale MODERN SPECIES 80 CUNH6orf203 (ENSDLEG00000017561) #9 ENSDLEG00000017555 #10 QRSL1 (ENSDLEG00000017520) #12 RTN4IP1 (ENSDLEG00000017504) #13 ENSDLEG00000017491 ENSDLEG00000017458 CRYBG1 (ENSDLEG00000017426) #14 ENSDLEG00000017411 ATG5 (ENSDLEG00000017390) #16 PRDM1 (ENSDLEG00000017371) #17 ENSDLEG00000017350 PREP (ENSDLEG00000017313) #18 POPDC3 (ENSDLEG00000017299) #19 BVES (ENSDLEG00000017267) #20 LIN28B (ENSDLEG00000017221) #21 HACE1 (ENSDLEG00000017132) #22 ENSDLEG00000017116 ENSDLEG00000017112 ENSDLEG00000017104 ENSDLEG00000017099 GRIK2 (ENSDLEG00000017039) ENSDLEG00000017014 ASCC3 (ENSDLEG00000016917) SIM1 (ENSDLEG00000016898) MCHR2 (ENSDLEG00000016838) PRDM13 (ENSDLEG00000016823) CCNC (ENSDLEG00000016748) TSTD3 (ENSDLEG00000016726) USP45 (ENSDLEG00000016693) PNISR (ENSDLEG00000016648) COQ3 (ENSDLEG00000016636) Vaquita MODERN SPECIES 3 BEND3 (ENSPSNG00000013346) #8 MTRES1 (ENSPSNG00000013378) #9 ENSPSNG00000013443 #10 QRSL1 (ENSPSNG00000013527) #12 RTN4IP1 (ENSPSNG00000013614) #13 CRYBG1 (ENSPSNG00000013720) #14 ENSPSNG00000013855 ENSPSNG00000013913 ATG5 (ENSPSNG00000014006) #16 ENSPSNG00000014192 PRDM1 (ENSPSNG00000014233) #17 PREP (ENSPSNG00000014450) #18 POPDC3 (ENSPSNG00000014548) #19 BVES (ENSPSNG00000014643) #20 LIN28B (ENSPSNG00000014731) #21 HACE1 (ENSPSNG00000014920) #22 ENSPSNG00000015137 ENSPSNG00000015155 ENSPSNG00000015175 ENSPSNG00000015195 GRIK2 (ENSPSNG00000015353) ENSPSNG00000016469 ASCC3 (ENSPSNG00000016505) ENSPSNG00000016595 MCHR2 (ENSPSNG00000016680) PRDM13 (ENSPSNG00000016806) CCNC (ENSPSNG00000016881) ENSPSNG00000017064 USP45 (ENSPSNG00000017100) PNISR (ENSPSNG00000017222) COQ3 (ENSPSNG00000017302) Sperm whale MODERN SPECIES 1 C10H6orf203 (ENSPCTG00005014085) #9 ENSPCTG00005014121 #10 QRSL1 (ENSPCTG00005014148) #12 RTN4IP1 (ENSPCTG00005014223) #13 CRYBG1 (ENSPCTG00005014434) #14 ENSPCTG00005014468 ENSPCTG00005014481 ATG5 (ENSPCTG00005014542) #16 ENSPCTG00005014799 PRDM1 (ENSPCTG00005014867) #17 ENSPCTG00005015126 PREP (ENSPCTG00005015210) #18 POPDC3 (ENSPCTG00005015471) #19 BVES (ENSPCTG00005015536) #20 LIN28B (ENSPCTG00005015601) #21 HACE1 (ENSPCTG00005015741) #22 ENSPCTG00005016006 GRIK2 (ENSPCTG00005016045) ASCC3 (ENSPCTG00005016900) SIM1 (ENSPCTG00005017163) ENSPCTG00005017288 ENSPCTG00005017310 MCHR2 (ENSPCTG00005017331) PRDM13 (ENSPCTG00005017399) ENSPCTG00005017463 ENSPCTG00005017522 USP45 (ENSPCTG00005017566) PNISR (ENSPCTG00005017617) COQ3 (ENSPCTG00005017704) FAXC (ENSPCTG00005017812) FBXL4 (ENSPCTG00005017834) Blue whale MODERN SPECIES 3 MTRES1 (ENSBMSG00010014698) #9 ENSBMSG00010014725 #10 ENSBMSG00010014752 QRSL1 (ENSBMSG00010014781) #12 RTN4IP1 (ENSBMSG00010014817) #13 CRYBG1 (ENSBMSG00010014861) #14 ENSBMSG00010014960 ATG5 (ENSBMSG00010015017) #16 ENSBMSG00010015168 PRDM1 (ENSBMSG00010015211) #17 ENSBMSG00010015421 PREP (ENSBMSG00010008712) #18 POPDC3 (ENSBMSG00010008729) #19 BVES (ENSBMSG00010008737) #20 LIN28B (ENSBMSG00010008757) #21 HACE1 (ENSBMSG00010008789) #22 ENSBMSG00010008820 ENSBMSG00010008827 GRIK2 (ENSBMSG00010008932) ENSBMSG00010009197 ENSBMSG00010009205 ENSBMSG00010009216 SIM1 (ENSBMSG00010009233) ENSBMSG00010009250 MCHR2 (ENSBMSG00010009258) PRDM13 (ENSBMSG00010009275) CCNC (ENSBMSG00010009323) ENSBMSG00010009354 USP45 (ENSBMSG00010009370) PNISR (ENSBMSG00010009388) COQ3 (ENSBMSG00010009417) Pecora ANCESTRAL SPECIES 19 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.b #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT01030000236423 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000164601 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 Yarkand deer MODERN SPECIES 20 PDSS2 (ENSCHYG00000021575) #7 ENSCHYG00000021717 BEND3 (ENSCHYG00000021757) #8 MTRES1 (ENSCHYG00000021800) #9 ENSCHYG00000021838 #10 QRSL1 (ENSCHYG00000021880) #12 RTN4IP1 (ENSCHYG00000021960) #13 CRYBG1 (ENSCHYG00000022057) #14 ATG5 (ENSCHYG00000022719) #16 PRDM1 (ENSCHYG00000022882) #17 PREP (ENSCHYG00000023040) #18 ENSCHYG00000023289 POPDC3 (ENSCHYG00000023314) #19 BVES (ENSCHYG00000023334) #20 LIN28B (ENSCHYG00000023383) #21 HACE1 (ENSCHYG00000023545) #22 ENSCHYG00000024260 ENSCHYG00000024278 ENSCHYG00000024291 GRIK2 (ENSCHYG00000024358) ASCC3 (ENSCHYG00000024791) SIM1 (ENSCHYG00000024834) ENSCHYG00000024861 PRDM13 (ENSCHYG00000024927) ENSCHYG00000024960 CCNC (ENSCHYG00000025007) TSTD3 (ENSCHYG00000025097) USP45 (ENSCHYG00000025122) PNISR (ENSCHYG00000025150) COQ3 (ENSCHYG00000025175) FAXC (ENSCHYG00000025221) Percora_a ANCESTRAL SPECIES 21 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.b #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT01010000228077 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT01030000236423 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000155206.c.a ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625 ENSGT00940000164601 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 Bovidae ANCESTRAL SPECIES 21 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.b #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT01010000228077 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT01030000236423 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000155206.c.a ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000164601 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A Bovinae ANCESTRAL SPECIES 31 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.b #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00950000186448 ENSGT00960000190646 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00390000004856.w.a.a.b.b.a.b.a ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT01030000236423 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00510000046985.h.b.a.a.b ENSGT00940000155206.c.a ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A Bos ANCESTRAL SPECIES 19 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.b #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00950000186448 ENSGT00960000190646 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00390000004856.w.a.a.b.b.a.b.a ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00510000046985.h.b.a.a.b ENSGT00940000155206.c.b.b ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625 ENSGT00940000164601.e ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 Bos_a ANCESTRAL SPECIES 18 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.b #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00390000004856.w.a.a.b.b.a.b.a ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00950000183010.a.b.a.a.a.a.a.b.b.i.b ENSGT00940000155377 ENSGT00940000156143 ENSGT00510000046985.h.b.a.a.b ENSGT00940000155206.c.b.b ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625 ENSGT00940000164932 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A Wild yak MODERN SPECIES 1304 ATG5 (ENSBMUG00000023134) #16 PRDM1 (ENSBMUG00000023100) #17 ENSBMUG00000023085 PREP (ENSBMUG00000023073) #18 POPDC3 (ENSBMUG00000023059) #19 BVES (ENSBMUG00000023051) #20 LIN28B (ENSBMUG00000023040) #21 HACE1 (ENSBMUG00000023019) #22 ENSBMUG00000022972 ENSBMUG00000022963 Domestic yak MODERN SPECIES 1 ENSBGRG00000006311 QRSL1 (ENSBGRG00000006270) #12 ENSBGRG00000006262 RTN4IP1 (ENSBGRG00000006146) #13 CRYBG1 (ENSBGRG00000005685) #14 ATG5 (ENSBGRG00000005379) #16 PRDM1 (ENSBGRG00000005178) #17 ENSBGRG00000005152 ENSBGRG00000005146 ENSBGRG00000005140 PREP (ENSBGRG00000005031) #18 POPDC3 (ENSBGRG00000005006) #19 BVES (ENSBGRG00000004850) #20 LIN28B (ENSBGRG00000004803) #21 ENSBGRG00000004777 HACE1 (ENSBGRG00000004127) #22 ENSBGRG00000004076 ENSBGRG00000004053 GRIK2 (ENSBGRG00000003805) ASCC3 (ENSBGRG00000003723) SIM1 (ENSBGRG00000003658) ENSBGRG00000003627 ENSBGRG00000003604 ENSBGRG00000003594 ENSBGRG00000003580 PRDM13 (ENSBGRG00000026581) ENSBGRG00000026578 ENSBGRG00000026554 TSTD3 (ENSBGRG00000026535) USP45 (ENSBGRG00000026528) PNISR (ENSBGRG00000026524) Bos_b ANCESTRAL SPECIES 24 ENSGT00940000157463.y.a ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.b.e #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT01100000263481.n.a.a.a.a.a.b.b.b ENSGT01030000236423 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00510000046985.h.b.a.a.b ENSGT00940000155206.c.b.b ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625 ENSGT00940000164601.e ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 Hybrid Bos Indicus MODERN SPECIES 28 BEND3 (ENSBIXG00005029403) #8 MTRES1 (ENSBIXG00005029440) #9 ENSBIXG00005029470 #10 ENSBIXG00005029500 #12 ENSBIXG00005029552 #13 CRYBG1 (ENSBIXG00005029620) #14 ATG5 (ENSBIXG00005029723) #16 PRDM1 (ENSBIXG00005029779) #17 ENSBIXG00005029830 ENSBIXG00005029840 PREP (ENSBIXG00005029865) #18 POPDC3 (ENSBIXG00005029917) #19 BVES (ENSBIXG00005029927) #20 ENSBIXG00005029941 LIN28B (ENSBIXG00005029958) #21 HACE1 (ENSBIXG00005030042) #22 ENSBIXG00005030149 ENSBIXG00005030156 ENSBIXG00005030182 GRIK2 (ENSBIXG00005030262) ASCC3 (ENSBIXG00005030349) SIM1 (ENSBIXG00005030367) ENSBIXG00005030383 ENSBIXG00005030391 MCHR2 (ENSBIXG00005030398) PRDM13 (ENSBIXG00005030415) ENSBIXG00005030422 ENSBIXG00005030448 ENSBIXG00005030467 USP45 (ENSBIXG00005030475) PNISR (ENSBIXG00005030498) Cow MODERN SPECIES 28 ENSBTAG00000052829 PDSS2 (ENSBTAG00000021859) #7 BEND3 (ENSBTAG00000012534) #8 MTRES1 (ENSBTAG00000021398) #9 ENSBTAG00000052465 #10 QRSL1 (ENSBTAG00000017557) #12 RTN4IP1 (ENSBTAG00000017554) #13 CRYBG1 (ENSBTAG00000017527) #14 ENSBTAG00000052057 ATG5 (ENSBTAG00000005400) #16 PRDM1 (ENSBTAG00000000816) #17 PREP (ENSBTAG00000016281) #18 POPDC3 (ENSBTAG00000046017) #19 BVES (ENSBTAG00000018790) #20 LIN28B (ENSBTAG00000043973) #21 HACE1 (ENSBTAG00000001533) #22 ENSBTAG00000051738 ENSBTAG00000053858 GRIK2 (ENSBTAG00000033153) ASCC3 (ENSBTAG00000020482) SIM1 (ENSBTAG00000002294) ENSBTAG00000014104 ENSBTAG00000052778 MCHR2 (ENSBTAG00000005449) PRDM13 (ENSBTAG00000006095) ENSBTAG00000054078 CCNC (ENSBTAG00000015744) USP45 (ENSBTAG00000018528) TSTD3 (ENSBTAG00000038931) PNISR (ENSBTAG00000019730) COQ3 (ENSBTAG00000019729) American bison MODERN SPECIES 3287 ENSBBBG00000010715 ENSBBBG00000010700 ENSBBBG00000010682 #12 RTN4IP1 (ENSBBBG00000001868) #13 CRYBG1 (ENSBBBG00000010653) #14 ENSBBBG00000010639 ENSBBBG00000010638 ATG5 (ENSBBBG00000010625) #16 PRDM1 (ENSBBBG00000010598) #17 ENSBBBG00000001852 PREP (ENSBBBG00000010572) #18 ENSBBBG00000001850 POPDC3 (ENSBBBG00000007299) #19 BVES (ENSBBBG00000010549) #20 LIN28B (ENSBBBG00000010534) #21 HACE1 (ENSBBBG00000010526) #22 ENSBBBG00000010497 ENSBBBG00000001834 ENSBBBG00000010496 Caprinae ANCESTRAL SPECIES 33 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.b #10 ENSGT00550000074866.c #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT01010000228077 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000155206.c.a ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000154550.a.e.b.b ENSGT00940000155625.c ENSGT00940000164932 ENSGT00940000164601 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 Goat MODERN SPECIES 28 SOBP (ENSCHIG00000007832) PDSS2 (ENSCHIG00000015163) #7 BEND3 (ENSCHIG00000010728) #8 MTRES1 (ENSCHIG00000005527) #9 CD24 (ENSCHIG00000015151) #10 ENSCHIG00000017313 #12 RTN4IP1 (ENSCHIG00000011362) #13 CRYBG1 (ENSCHIG00000020732) #14 ATG5 (ENSCHIG00000019684) #16 PRDM1 (ENSCHIG00000023368) #17 PREP (ENSCHIG00000019257) #18 POPDC3 (ENSCHIG00000016800) #19 BVES (ENSCHIG00000008491) #20 LIN28B (ENSCHIG00000011133) #21 ENSCHIG00000015439 HACE1 (ENSCHIG00000025754) #22 ENSCHIG00000025858 ENSCHIG00000009503 ENSCHIG00000018302 ENSCHIG00000015656 GRIK2 (ENSCHIG00000021980) ASCC3 (ENSCHIG00000023605) SIM1 (ENSCHIG00000010900) ENSCHIG00000009763 MCHR2 (ENSCHIG00000014417) PRDM13 (ENSCHIG00000006628) ENSCHIG00000020922 ENSCHIG00000016858 ENSCHIG00000013830 USP45 (ENSCHIG00000013909) PNISR (ENSCHIG00000017747) Rambouillet Sheep MODERN SPECIES 24 MTRES1 (ENSOARG00020011697) #9 CD24 (ENSOARG00020011839) #10 QRSL1 (ENSOARG00020011934) #12 RTN4IP1 (ENSOARG00020012231) #13 CRYBG1 (ENSOARG00020012867) #14 ENSOARG00020013506 ATG5 (ENSOARG00020013575) #16 PRDM1 (ENSOARG00020013852) #17 CYCS (ENSOARG00020014198) ENSOARG00020014217 PREP (ENSOARG00020014297) #18 POPDC3 (ENSOARG00020014545) #19 BVES (ENSOARG00020014598) #20 ENSOARG00020014675 LIN28B (ENSOARG00020003103) #21 HACE1 (ENSOARG00020003313) #22 ENSOARG00020004367 ENSOARG00020004377 ENSOARG00020004386 ENSOARG00020004427 ENSOARG00020004455 ENSOARG00020004479 ENSOARG00020004536 GRIK2 (ENSOARG00020004644) ASCC3 (ENSOARG00020006093) SIM1 (ENSOARG00020006280) ENSOARG00020006360 MCHR2 (ENSOARG00020006398) PRDM13 (ENSOARG00020006456) ENSOARG00020006550 CCNC (ENSOARG00020006653) Siberian musk deer MODERN SPECIES 57 ENSMMSG00000009562 BEND3 (ENSMMSG00000009582) #8 MTRES1 (ENSMMSG00000009604) #9 CD24 (ENSMMSG00000009656) #10 ENSMMSG00000009682 QRSL1 (ENSMMSG00000009700) #12 RTN4IP1 (ENSMMSG00000009752) #13 CRYBG1 (ENSMMSG00000009812) #14 ATG5 (ENSMMSG00000009989) #16 PRDM1 (ENSMMSG00000010156) #17 PREP (ENSMMSG00000010324) #18 POPDC3 (ENSMMSG00000010364) #19 BVES (ENSMMSG00000010405) #20 ENSMMSG00000010511 LIN28B (ENSMMSG00000010589) #21 HACE1 (ENSMMSG00000010633) #22 ENSMMSG00000010683 ENSMMSG00000010701 GRIK2 (ENSMMSG00000010751) ASCC3 (ENSMMSG00000011234) SIM1 (ENSMMSG00000011342) ENSMMSG00000011367 MCHR2 (ENSMMSG00000011392) PRDM13 (ENSMMSG00000011437) ENSMMSG00000011452 ENSMMSG00000011528 ENSMMSG00000012283 ENSMMSG00000012312 PNISR (ENSMMSG00000012362) COQ3 (ENSMMSG00000012403) FAXC (ENSMMSG00000012455) Camelidae ANCESTRAL SPECIES 26 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.g.b #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00410000028929 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00390000011769 ENSGT00940000157179 Alpaca MODERN SPECIES 3044 POPDC3 (ENSVPAG00000011206) #19 ENSVPAG00000011205 BVES (ENSVPAG00000011204) #20 LIN28B (ENSVPAG00000011202) #21 HACE1 (ENSVPAG00000011198) #22 Arabian camel MODERN SPECIES 34 SCML4 (ENSCDRG00005009375) ENSCDRG00005009503 PDSS2 (ENSCDRG00005009549) #7 BEND3 (ENSCDRG00005009651) #8 MTRES1 (ENSCDRG00005009712) #9 ENSCDRG00005009820 #10 QRSL1 (ENSCDRG00005009875) #12 RTN4IP1 (ENSCDRG00005009990) #13 ENSCDRG00005010087 #14 ATG5 (ENSCDRG00005010191) #16 PRDM1 (ENSCDRG00005010476) #17 PREP (ENSCDRG00005010990) #18 POPDC3 (ENSCDRG00005011183) #19 BVES (ENSCDRG00005011229) #20 LIN28B (ENSCDRG00005011271) #21 HACE1 (ENSCDRG00005011438) #22 ENSCDRG00005011925 GRIK2 (ENSCDRG00005012001) ASCC3 (ENSCDRG00005014245) SIM1 (ENSCDRG00005014556) MCHR2 (ENSCDRG00005014661) PRDM13 (ENSCDRG00005014704) CCNC (ENSCDRG00005014798) ENSCDRG00005015124 USP45 (ENSCDRG00005015163) ENSCDRG00005015288 PNISR (ENSCDRG00005015317) COQ3 (ENSCDRG00005015402) FAXC (ENSCDRG00005015492) FBXL4 (ENSCDRG00005015542) MMS22L (ENSCDRG00005015723) Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00910000147275 ENSGT00940000162208 Carnivora ANCESTRAL SPECIES 4 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829.f.a #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00910000147275 ENSGT00940000162208 Felidae ANCESTRAL SPECIES 5 ENSGT00940000153498.B.b #7 ENSGT00390000010020 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.f.a #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00910000147120 ENSGT00390000011769 Panthera ANCESTRAL SPECIES 7 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.f.a #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00910000147120 ENSGT00390000011769 Panthera_a ANCESTRAL SPECIES 4 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829.f.a #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00910000147120 ENSGT00390000011769 lion MODERN SPECIES 5 ENSPLOG00000001144 BEND3 (ENSPLOG00000001134) #8 MTRES1 (ENSPLOG00000001114) #9 CD24 (ENSPLOG00000001102) #10 QRSL1 (ENSPLOG00000001072) #12 RTN4IP1 (ENSPLOG00000001021) #13 ENSPLOG00000000998 CRYBG1 (ENSPLOG00000000953) #14 ATG5 (ENSPLOG00000000881) #16 PRDM1 (ENSPLOG00000000820) #17 PREP (ENSPLOG00000000781) #18 POPDC3 (ENSPLOG00000000761) #19 BVES (ENSPLOG00000000733) #20 ENSPLOG00000000717 LIN28B (ENSPLOG00000000691) #21 HACE1 (ENSPLOG00000000538) #22 GRIK2 (ENSPLOG00000019023) ASCC3 (ENSPLOG00000018850) SIM1 (ENSPLOG00000018732) MCHR2 (ENSPLOG00000018660) PRDM13 (ENSPLOG00000018587) CCNC (ENSPLOG00000018493) ENSPLOG00000018440 USP45 (ENSPLOG00000018326) PNISR (ENSPLOG00000018238) COQ3 (ENSPLOG00000018184) FAXC (ENSPLOG00000018136) FBXL4 (ENSPLOG00000018081) POU3F2 (ENSPLOG00000018042) ENSPLOG00000017984 MMS22L (ENSPLOG00000017912) leopard MODERN SPECIES 8 SOBP (ENSPPRG00000003897) PDSS2 (ENSPPRG00000005402) #7 BEND3 (ENSPPRG00000006060) #8 MTRES1 (ENSPPRG00000006302) #9 ENSPPRG00000006560 CD24 (ENSPPRG00000006861) #10 QRSL1 (ENSPPRG00000008093) #12 RTN4IP1 (ENSPPRG00000009483) #13 CRYBG1 (ENSPPRG00000010238) #14 ATG5 (ENSPPRG00000012874) #16 PRDM1 (ENSPPRG00000011148) #17 PREP (ENSPPRG00000013298) #18 POPDC3 (ENSPPRG00000013616) #19 BVES (ENSPPRG00000015358) #20 LIN28B (ENSPPRG00000016158) #21 HACE1 (ENSPPRG00000021923) #22 ENSPPRG00000001508 ENSPPRG00000002223 GRIK2 (ENSPPRG00000007805) ENSPPRG00000009471 ASCC3 (ENSPPRG00000011358) SIM1 (ENSPPRG00000012016) MCHR2 (ENSPPRG00000012296) ENSPPRG00000013213 ENSPPRG00000013407 PRDM13 (ENSPPRG00000014466) CCNC (ENSPPRG00000021173) ENSPPRG00000022482 TSTD3 (ENSPPRG00000023365) USP45 (ENSPPRG00000000211) PNISR (ENSPPRG00000001237) Tiger MODERN SPECIES 224 QRSL1 (ENSPTIG00000005922) #12 RTN4IP1 (ENSPTIG00000006502) #13 CRYBG1 (ENSPTIG00000006860) #14 ATG5 (ENSPTIG00000008326) #16 PRDM1 (ENSPTIG00000008628) #17 PREP (ENSPTIG00000008923) #18 POPDC3 (ENSPTIG00000009134) #19 BVES (ENSPTIG00000009214) #20 LIN28B (ENSPTIG00000009405) #21 HACE1 (ENSPTIG00000009969) #22 Cat MODERN SPECIES 236 PDSS2 (ENSFCAG00000024608) #7 ENSFCAG00000051054 BEND3 (ENSFCAG00000008869) #8 MTRES1 (ENSFCAG00000046698) #9 ENSFCAG00000032455 #10 QRSL1 (ENSFCAG00000005096) #12 RTN4IP1 (ENSFCAG00000030660) #13 ENSFCAG00000053486 CRYBG1 (ENSFCAG00000005094) #14 ATG5 (ENSFCAG00000031909) #16 PRDM1 (ENSFCAG00000010755) #17 PREP (ENSFCAG00000005061) #18 POPDC3 (ENSFCAG00000005060) #19 BVES (ENSFCAG00000005059) #20 LIN28B (ENSFCAG00000044308) #21 HACE1 (ENSFCAG00000022001) #22 GRIK2 (ENSFCAG00000011846) ASCC3 (ENSFCAG00000031266) SIM1 (ENSFCAG00000005942) MCHR2 (ENSFCAG00000022111) ENSFCAG00000024211 PRDM13 (ENSFCAG00000040508) CCNC (ENSFCAG00000007731) ENSFCAG00000026591 USP45 (ENSFCAG00000007166) PNISR (ENSFCAG00000007165) COQ3 (ENSFCAG00000018466) FAXC (ENSFCAG00000007164) FBXL4 (ENSFCAG00000012863) POU3F2 (ENSFCAG00000022988) ENSFCAG00000034525 Caniformia ANCESTRAL SPECIES 3 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829.f.a #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00910000147275 ENSGT00940000162208 Canidae ANCESTRAL SPECIES 6 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829.f.a.d #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT01050000247939 ENSGT00940000160200 ENSGT00940000167379 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 Canis_lupus ANCESTRAL SPECIES 11 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829.f.a.d #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000154737.d ENSGT00940000154399.a.b.a.a ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT01050000247939 ENSGT00940000160200 ENSGT00940000155625.o.b ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 Dingo MODERN SPECIES 370 ENSCAFG00020017819 SOBP (ENSCAFG00020017814) PDSS2 (ENSCAFG00020017808) #7 BEND3 (ENSCAFG00020017802) #8 MTRES1 (ENSCAFG00020017801) #9 QRSL1 (ENSCAFG00020017795) #12 RTN4IP1 (ENSCAFG00020017789) #13 ENSCAFG00020017786 CRYBG1 (ENSCAFG00020017663) #14 ATG5 (ENSCAFG00020017640) #16 PRDM1 (ENSCAFG00020017630) #17 PREP (ENSCAFG00020017616) #18 POPDC3 (ENSCAFG00020017612) #19 BVES (ENSCAFG00020017609) #20 LIN28B (ENSCAFG00020017606) #21 HACE1 (ENSCAFG00020017333) #22 ENSCAFG00020017311 ENSCAFG00020017309 GRIK2 (ENSCAFG00020017210) ENSCAFG00020017193 ASCC3 (ENSCAFG00020016899) SIM1 (ENSCAFG00020016848) MCHR2 (ENSCAFG00020016844) ENSCAFG00020016837 ENSCAFG00020016831 PRDM13 (ENSCAFG00020016828) ENSCAFG00020016817 ENSCAFG00020016799 ENSCAFG00020016795 ENSCAFG00020016782 ENSCAFG00020016776 Dog MODERN SPECIES 3 SOBP (ENSCAFG00845008693) PDSS2 (ENSCAFG00845008531) #7 BEND3 (ENSCAFG00845008452) #8 ENSCAFG00845008420 MTRES1 (ENSCAFG00845008387) #9 ENSCAFG00845008352 #10 QRSL1 (ENSCAFG00845008279) #12 RTN4IP1 (ENSCAFG00845008205) #13 CRYBG1 (ENSCAFG00845008056) #14 ATG5 (ENSCAFG00845007954) #16 PRDM1 (ENSCAFG00845007842) #17 PREP (ENSCAFG00845007652) #18 POPDC3 (ENSCAFG00845007572) #19 BVES (ENSCAFG00845007542) #20 LIN28B (ENSCAFG00845007472) #21 HACE1 (ENSCAFG00845006967) #22 ENSCAFG00845006846 ENSCAFG00845006825 GRIK2 (ENSCAFG00845006184) RPL3 (ENSCAFG00845005950) ASCC3 (ENSCAFG00845005906) SIM1 (ENSCAFG00845005849) MCHR2 (ENSCAFG00845005808) ENSCAFG00845005768 PRDM13 (ENSCAFG00845005747) ENSCAFG00845005709 ENSCAFG00845005684 ENSCAFG00845005674 ENSCAFG00845005651 PNISR (ENSCAFG00845005607) COQ3 (ENSCAFG00845005564) Red fox MODERN SPECIES 54 ENSVVUG00000004735 SOBP (ENSVVUG00000004706) PDSS2 (ENSVVUG00000004658) #7 ENSVVUG00000004652 BEND3 (ENSVVUG00000004649) #8 ENSVVUG00000004648 #9 QRSL1 (ENSVVUG00000004637) #12 RTN4IP1 (ENSVVUG00000004632) #13 CRYBG1 (ENSVVUG00000004496) #14 ATG5 (ENSVVUG00000004478) #16 PRDM1 (ENSVVUG00000004465) #17 PREP (ENSVVUG00000003825) #18 POPDC3 (ENSVVUG00000003775) #19 BVES (ENSVVUG00000003754) #20 LIN28B (ENSVVUG00000003739) #21 HACE1 (ENSVVUG00000003691) #22 ENSVVUG00000003658 ENSVVUG00000003647 Caniformia_b ANCESTRAL SPECIES 6 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829.f.a #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00910000147275 ENSGT00940000162208 Ursidae ANCESTRAL SPECIES 22 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829.f.a #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000153664.A.a.m.b.b.a.a ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00910000147275 Ursus ANCESTRAL SPECIES 131 ENSGT00940000157463.y.b ENSGT00940000157463.y.a ENSGT00940000157463.z ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000153664.A.a.m.b.b.a.a ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00910000147275.a Polar bear MODERN SPECIES 268 ENSUMAG00000019838 SEC63 (ENSUMAG00000019843) SCML4 (ENSUMAG00000019857) SOBP (ENSUMAG00000019861) PDSS2 (ENSUMAG00000019867) #7 MTRES1 (ENSUMAG00000019879) #9 QRSL1 (ENSUMAG00000019887) #12 RTN4IP1 (ENSUMAG00000019890) #13 CRYBG1 (ENSUMAG00000019920) #14 ATG5 (ENSUMAG00000020055) #16 PREP (ENSUMAG00000020265) #18 POPDC3 (ENSUMAG00000020909) #19 BVES (ENSUMAG00000020912) #20 LIN28B (ENSUMAG00000020916) #21 ENSUMAG00000020919 HACE1 (ENSUMAG00000020920) #22 GRIK2 (ENSUMAG00000020951) ENSUMAG00000021158 ASCC3 (ENSUMAG00000021200) SIM1 (ENSUMAG00000021405) MCHR2 (ENSUMAG00000021410) ENSUMAG00000021420 CCNC (ENSUMAG00000021426) ENSUMAG00000021431 USP45 (ENSUMAG00000021451) ENSUMAG00000021582 PNISR (ENSUMAG00000021583) COQ3 (ENSUMAG00000021586) FAXC (ENSUMAG00000021588) FBXL4 (ENSUMAG00000021593) ENSUMAG00000021595 American black bear MODERN SPECIES 3446 HACE1 (ENSUAMG00000005305) #22 Giant Panda MODERN SPECIES 1 BEND3 (ENSAMEG00000008053) #8 ENSAMEG00000023827 MTRES1 (ENSAMEG00000008052) #9 CD24 (ENSAMEG00000031404) #10 QRSL1 (ENSAMEG00000002571) #12 ENSAMEG00000029538 #13 ENSAMEG00000024019 CRYBG1 (ENSAMEG00000001523) #14 PRDM1 (ENSAMEG00000001482) #17 ATG5 (ENSAMEG00000001503) #16 PREP (ENSAMEG00000011361) #18 POPDC3 (ENSAMEG00000011433) #19 BVES (ENSAMEG00000028861) #20 ENSAMEG00000026936 LIN28B (ENSAMEG00000011453) #21 HACE1 (ENSAMEG00000011456) #22 GRIK2 (ENSAMEG00000005434) ENSAMEG00000029057 ENSAMEG00000027241 ASCC3 (ENSAMEG00000014749) SIM1 (ENSAMEG00000014765) MCHR2 (ENSAMEG00000014776) ENSAMEG00000028942 PRDM13 (ENSAMEG00000008949) ENSAMEG00000008954 ENSAMEG00000008959 USP45 (ENSAMEG00000008960) ENSAMEG00000023959 PNISR (ENSAMEG00000011196) COQ3 (ENSAMEG00000011217) FAXC (ENSAMEG00000011234) Mustelinae ANCESTRAL SPECIES 26 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829.f.a #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00900000143654 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00910000147120 American mink MODERN SPECIES 4 ENSNVIG00000004244 PDSS2 (ENSNVIG00000004192) #7 BEND3 (ENSNVIG00000004176) #8 MTRES1 (ENSNVIG00000004157) #9 ENSNVIG00000004145 #10 QRSL1 (ENSNVIG00000004081) #12 RTN4IP1 (ENSNVIG00000004067) #13 ENSNVIG00000004058 CRYBG1 (ENSNVIG00000003998) #14 ATG5 (ENSNVIG00000003945) #16 PRDM1 (ENSNVIG00000003863) #17 PREP (ENSNVIG00000003825) #18 POPD3 (ENSNVIG00000003813) #19 POPD1 (ENSNVIG00000003747) #20 LIN28B (ENSNVIG00000003725) #21 HACE1 (ENSNVIG00000003630) #22 ENSNVIG00000003598 GRIK2 (ENSNVIG00000003341) Ferret DUPLICATION Ferret MODERN SPECIES 201 PDSS2 (ENSMPUG00000009682) #7 BEND3 (ENSMPUG00000009678) #8 ENSMPUG00000019102 MTRES1 (ENSMPUG00000009672) #9 CD24 (ENSMPUG00000009669) #10 QRSL1 (ENSMPUG00000009661) #12 RTN4IP1 (ENSMPUG00000009654) #13 CRYBG1 (ENSMPUG00000009543) #14 ATG5 (ENSMPUG00000009534) #16 PRDM1 (ENSMPUG00000009522) #17 PREP (ENSMPUG00000009513) #18 POPDC3 (ENSMPUG00000009505) #19 BVES (ENSMPUG00000009502) #20 LIN28B (ENSMPUG00000009489) #21 ENSMPUG00000009481 ENSMPUG00000009479 #22 Ferret DUPLICATION Ferret MODERN SPECIES 424 ENSMPUG00000001289 #22 ENSMPUG00000001285 #22 Ferret MODERN SPECIES 424 ENSMPUG00000001289 #22 ENSMPUG00000001285 #22 Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00910000147120 Chiroptera ANCESTRAL SPECIES 3 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00910000147120 Microchiroptera ANCESTRAL SPECIES 4 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00900000143654 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00910000147120 Greater horseshoe bat MODERN SPECIES 21 SOBP (ENSRFEG00010010519) PDSS2 (ENSRFEG00010010408) #7 BEND3 (ENSRFEG00010010319) #8 MTRES1 (ENSRFEG00010003814) #9 ENSRFEG00010003796 #10 QRSL1 (ENSRFEG00010003777) #12 CRYBG1 (ENSRFEG00010003739) #14 ENSRFEG00010003711 RTN4IP1 (ENSRFEG00010003684) #13 PRDM1 (ENSRFEG00010003594) #17 ATG5 (ENSRFEG00010003510) #16 PREP (ENSRFEG00010003440) #18 POPDC3 (ENSRFEG00010003422) #19 BVES (ENSRFEG00010003402) #20 LIN28B (ENSRFEG00010003383) #21 HACE1 (ENSRFEG00010003307) #22 ENSRFEG00010003252 ENSRFEG00010003239 GRIK2 (ENSRFEG00010003101) ENSRFEG00010003009 ASCC3 (ENSRFEG00010002943) SIM1 (ENSRFEG00010002901) MCHR2 (ENSRFEG00010002876) PRDM13 (ENSRFEG00010002847) CCNC (ENSRFEG00010002800) ENSRFEG00010002763 USP45 (ENSRFEG00010002705) ENSRFEG00010002660 PNISR (ENSRFEG00010002631) COQ3 (ENSRFEG00010002591) FAXC (ENSRFEG00010002564) Microbat MODERN SPECIES 1277 PREP (ENSMLUG00000007733) #18 POPDC3 (ENSMLUG00000000811) #19 BVES (ENSMLUG00000006888) #20 ENSMLUG00000029623 LIN28B (ENSMLUG00000006883) #21 HACE1 (ENSMLUG00000016249) #22 Megabat MODERN SPECIES 3502 HACE1 (ENSPVAG00000009471) #22 Equus ANCESTRAL SPECIES 29 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000010020 ENSGT00390000009366 #9 ENSGT00390000018829.b #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00910000146889 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00390000011769 ENSGT00940000157179 Horse MODERN SPECIES 1 PDSS2 (ENSECAG00000024085) #7 BEND3 (ENSECAG00000023993) #8 ENSECAG00000047274 MTRES1 (ENSECAG00000023985) #9 ENSECAG00000031607 #10 QRSL1 (ENSECAG00000021023) #12 RTN4IP1 (ENSECAG00000019289) #13 ATG5 (ENSECAG00000013971) #16 CRYBG1 (ENSECAG00000015079) #14 PRDM1 (ENSECAG00000009044) #17 ENSECAG00000053373 PREP (ENSECAG00000023502) #18 POPDC3 (ENSECAG00000021367) #19 BVES (ENSECAG00000038417) #20 LIN28B (ENSECAG00000020994) #21 HACE1 (ENSECAG00000015445) #22 ENSECAG00000059064 ENSECAG00000053938 GRIK2 (ENSECAG00000020215) ASCC3 (ENSECAG00000012013) SIM1 (ENSECAG00000009161) MCHR2 (ENSECAG00000008037) PRDM13 (ENSECAG00000007855) CCNC (ENSECAG00000024439) TSTD3 (ENSECAG00000024361) ENSECAG00000038166 USP45 (ENSECAG00000023010) PNISR (ENSECAG00000019782) COQ3 (ENSECAG00000016788) FAXC (ENSECAG00000016044) FBXL4 (ENSECAG00000015268) Donkey MODERN SPECIES 16 PDSS2 (ENSEASG00005006444) #7 BEND3 (ENSEASG00005037754) #8 ENSEASG00005029634 MTRES1 (ENSEASG00005006440) #9 ENSEASG00005006439 #10 QRSL1 (ENSEASG00005006438) #12 RTN4IP1 (ENSEASG00005006435) #13 CRYBG1 (ENSEASG00005006430) #14 ATG5 (ENSEASG00005006428) #16 PRDM1 (ENSEASG00005006427) #17 ENSEASG00005033880 PREP (ENSEASG00005006425) #18 POPDC3 (ENSEASG00005006424) #19 BVES (ENSEASG00005006423) #20 LIN28B (ENSEASG00005026575) #21 HACE1 (ENSEASG00005006421) #22 ENSEASG00005027604 GRIK2 (ENSEASG00005006419) ASCC3 (ENSEASG00005006324) SIM1 (ENSEASG00005006300) MCHR2 (ENSEASG00005006295) PRDM13 (ENSEASG00005006291) CCNC (ENSEASG00005006285) ENSEASG00005035127 USP45 (ENSEASG00005006164) ENSEASG00005006143 PNISR (ENSEASG00005006141) COQ3 (ENSEASG00005006138) FAXC (ENSEASG00005006137) FBXL4 (ENSEASG00005006132) ENSEASG00005031507 Atlantogenata ANCESTRAL SPECIES 3 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 Xenarthra ANCESTRAL SPECIES ENSGT00940000155839 #22 Sloth MODERN SPECIES 8080 HACE1 (ENSCHOG00000006900) #22 Armadillo MODERN SPECIES 3892 PDSS2 (ENSDNOG00000000559) #7 BEND3 (ENSDNOG00000035050) #8 ENSDNOG00000014433 #9 QRSL1 (ENSDNOG00000006990) #12 RTN4IP1 (ENSDNOG00000006973) #13 CRYBG1 (ENSDNOG00000006946) #14 ENSDNOG00000046752 ATG5 (ENSDNOG00000013004) #16 PRDM1 (ENSDNOG00000044646) #17 PREP (ENSDNOG00000000259) #18 POPDC3 (ENSDNOG00000041457) #19 ENSDNOG00000033014 #20 LIN28B (ENSDNOG00000015300) #21 ENSDNOG00000040003 HACE1 (ENSDNOG00000015667) #22 ENSDNOG00000032448 Afrotheria ANCESTRAL SPECIES 13 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 ENSGT00390000001627 Tenrec MODERN SPECIES 9113 HACE1 (ENSETEG00000019852) #22 Afrotheria_a ANCESTRAL SPECIES 13 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 ENSGT00390000001627 Hyrax MODERN SPECIES 7616 HACE1 (ENSPCAG00000011886) #22 Elephant MODERN SPECIES 1 ENSLAFG00000013674 SOBP (ENSLAFG00000013670) PDSS2 (ENSLAFG00000013247) #7 BEND3 (ENSLAFG00000005298) #8 MTRES1 (ENSLAFG00000005301) #9 CD24 (ENSLAFG00000007742) #10 QRSL1 (ENSLAFG00000012887) #12 RTN4IP1 (ENSLAFG00000006744) #13 ENSLAFG00000026098 #14 ATG5 (ENSLAFG00000017057) #16 PRDM1 (ENSLAFG00000013436) #17 PREP (ENSLAFG00000006151) #18 POPDC3 (ENSLAFG00000018065) #19 BVES (ENSLAFG00000009474) #20 LIN28B (ENSLAFG00000017788) #21 HACE1 (ENSLAFG00000002989) #22 GRIK2 (ENSLAFG00000016101) ASCC3 (ENSLAFG00000011363) ENSLAFG00000029874 SIM1 (ENSLAFG00000006594) MCHR2 (ENSLAFG00000008248) PRDM13 (ENSLAFG00000012439) CCNC (ENSLAFG00000002112) USP45 (ENSLAFG00000008357) PNISR (ENSLAFG00000027683) COQ3 (ENSLAFG00000006127) FAXC (ENSLAFG00000007281) FBXL4 (ENSLAFG00000005295) ENSLAFG00000031052 ENSLAFG00000026780 MMS22L (ENSLAFG00000005793) Marsupialia ANCESTRAL SPECIES 2 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 Diprotodontia ANCESTRAL SPECIES 15 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 Diprotodontia_a ANCESTRAL SPECIES 23 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00390000018829 #10 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179 Common wonbat MODERN SPECIES 36 PDSS2 (ENSVURG00010010278) #7 BEND3 (ENSVURG00010010224) #8 MTRES1 (ENSVURG00010010203) #9 CD24 (ENSVURG00010010174) #10 QRSL1 (ENSVURG00010010151) #12 RTN4IP1 (ENSVURG00010010119) #13 ENSVURG00010010101 CRYBG1 (ENSVURG00010010054) #14 ATG5 (ENSVURG00010010025) #16 PRDM1 (ENSVURG00010010010) #17 PREP (ENSVURG00010009992) #18 POPDC3 (ENSVURG00010009979) #19 ENSVURG00010009977 BVES (ENSVURG00010009971) #20 LIN28B (ENSVURG00010009956) #21 HACE1 (ENSVURG00010009904) #22 ENSVURG00010009869 GRIK2 (ENSVURG00010007436) ASCC3 (ENSVURG00010007236) SIM1 (ENSVURG00010007204) MCHR2 (ENSVURG00010007191) ENSVURG00010007184 PRDM13 (ENSVURG00010007171) CCNC (ENSVURG00010007161) ENSVURG00010007146 ENSVURG00010007135 PNISR (ENSVURG00010007123) ENSVURG00010007119 FAXC (ENSVURG00010007107) ENSVURG00010007094 FBXL4 (ENSVURG00010007082) koala MODERN SPECIES 72 LIN28B (ENSPCIG00000019464) #21 HACE1 (ENSPCIG00000014252) #22 ENSPCIG00000012549 ENSPCIG00000033340 GRIK2 (ENSPCIG00000017046) ENSPCIG00000017283 ASCC3 (ENSPCIG00000017288) SIM1 (ENSPCIG00000013858) MCHR2 (ENSPCIG00000031129) ENSPCIG00000032972 CCNC (ENSPCIG00000000512) ENSPCIG00000000500 USP45 (ENSPCIG00000000483) PNISR (ENSPCIG00000000469) COQ3 (ENSPCIG00000000455) FAXC (ENSPCIG00000000444) FBXL4 (ENSPCIG00000000383) Wallaby MODERN SPECIES 485 ENSMEUG00000007759 #22 Tasmanian devil MODERN SPECIES 3 SEC63 (ENSSHAG00000017510) SCML4 (ENSSHAG00000017079) SOBP (ENSSHAG00000029303) PDSS2 (ENSSHAG00000015599) #7 BEND3 (ENSSHAG00000015283) #8 MTRES1 (ENSSHAG00000015190) #9 QRSL1 (ENSSHAG00000013597) #12 RTN4IP1 (ENSSHAG00000013285) #13 CRYBG1 (ENSSHAG00000012880) #14 ATG5 (ENSSHAG00000021331) #16 PRDM1 (ENSSHAG00000010080) #17 PREP (ENSSHAG00000014161) #18 POPDC3 (ENSSHAG00000013513) #19 BVES (ENSSHAG00000013121) #20 LIN28B (ENSSHAG00000026134) #21 HACE1 (ENSSHAG00000011274) #22 GRIK2 (ENSSHAG00000018207) ASCC3 (ENSSHAG00000016496) SIM1 (ENSSHAG00000016220) MCHR2 (ENSSHAG00000014523) PRDM13 (ENSSHAG00000013340) CCNC (ENSSHAG00000013087) ENSSHAG00000012967 USP45 (ENSSHAG00000012542) PNISR (ENSSHAG00000012240) COQ3 (ENSSHAG00000011955) FAXC (ENSSHAG00000029301) FBXL4 (ENSSHAG00000006900) POU3F2 (ENSSHAG00000025884) MMS22L (ENSSHAG00000017024) KLHL32 (ENSSHAG00000016625) Opossum MODERN SPECIES 1 ENSMODG00000018021 CD24 (ENSMODG00000049099) #10 QRSL1 (ENSMODG00000018023) #12 RTN4IP1 (ENSMODG00000018024) #13 ENSMODG00000050075 CRYBG1 (ENSMODG00000023357) #14 ATG5 (ENSMODG00000018027) #16 PRDM1 (ENSMODG00000018029) #17 ENSMODG00000028521 ENSMODG00000049471 ENSMODG00000023359 PREP (ENSMODG00000018031) #18 POPDC3 (ENSMODG00000018033) #19 BVES (ENSMODG00000018034) #20 LIN28B (ENSMODG00000018035) #21 HACE1 (ENSMODG00000018036) #22 ENSMODG00000040232 ENSMODG00000048349 GRIK2 (ENSMODG00000018065) ASCC3 (ENSMODG00000018082) SIM1 (ENSMODG00000018087) MCHR2 (ENSMODG00000018088) PRDM13 (ENSMODG00000018089) CCNC (ENSMODG00000018091) ENSMODG00000027875 USP45 (ENSMODG00000018098) ENSMODG00000042999 PNISR (ENSMODG00000018115) COQ3 (ENSMODG00000018116) FAXC (ENSMODG00000018119) FBXL4 (ENSMODG00000018121) Platypus MODERN SPECIES 10 SEC63 (ENSOANG00000000777) SCML4 (ENSOANG00000036521) SOBP (ENSOANG00000048313) PDSS2 (ENSOANG00000000783) #7 BEND3 (ENSOANG00000050605) #8 ENSOANG00000000784 #9 QRSL1 (ENSOANG00000003897) #12 RTN4IP1 (ENSOANG00000003898) #13 ENSOANG00000003899 #14 ATG5 (ENSOANG00000003900) #16 PRDM1 (ENSOANG00000004176) #17 PREP (ENSOANG00000004177) #18 POPDC3 (ENSOANG00000004179) #19 BVES (ENSOANG00000047336) #20 ENSOANG00000047568 #21 HACE1 (ENSOANG00000010300) #22 GRIK2 (ENSOANG00000010302) ASCC3 (ENSOANG00000008944) SIM1 (ENSOANG00000008943) MCHR2 (ENSOANG00000008942) CCNC (ENSOANG00000008940) ENSOANG00000008939 USP45 (ENSOANG00000008938) PNISR (ENSOANG00000008936) COQ3 (ENSOANG00000042398) FAXC (ENSOANG00000037382) FUT9 (ENSOANG00000008933) ENSOANG00000008932 EPHA7 (ENSOANG00000008930) ENSOANG00000022562 BACH2 (ENSOANG00000047982) Sauria ANCESTRAL SPECIES 1 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a Archelosauria ANCESTRAL SPECIES 1 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a Archosauria ANCESTRAL SPECIES 3 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a Aves ANCESTRAL SPECIES 10 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a Neognathae ANCESTRAL SPECIES 2 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a Galloanserae ANCESTRAL SPECIES 2 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a Anatidae ANCESTRAL SPECIES ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a Duck MODERN SPECIES 21 SEC63 (ENSAPLG00000010176) SCML4 (ENSAPLG00000010070) SOBP (ENSAPLG00000019216) PDSS2 (ENSAPLG00000009546) #7 BEND3 (ENSAPLG00000009545) #8 MTRES1 (ENSAPLG00000009523) #9 QRSL1 (ENSAPLG00000009374) #12 RTN4IP1 (ENSAPLG00000009151) #13 CRYBG1 (ENSAPLG00000008606) #14 ATG5 (ENSAPLG00000017968) #16 PRDM1 (ENSAPLG00000013593) #17 PREP (ENSAPLG00000014895) #18 POPDC3 (ENSAPLG00000022652) #19 BVES (ENSAPLG00000014413) #20 LIN28B (ENSAPLG00000019549) #21 HACE1 (ENSAPLG00000006280) #22 ENSAPLG00000022892 ENSAPLG00000029538 ENSAPLG00000012994 ENSAPLG00000031242 ASCC3 (ENSAPLG00000012589) SIM1 (ENSAPLG00000012534) ENSAPLG00000020003 PRDM13 (ENSAPLG00000027679) CCNC (ENSAPLG00000007635) ENSAPLG00000006518 USP45 (ENSAPLG00000007229) PNISR (ENSAPLG00000006740) ENSAPLG00000006613 FAXC (ENSAPLG00000006456) FBXL4 (ENSAPLG00000006412) Pink-footed goose MODERN SPECIES 43 SEC63 (ENSABRG00000002590) SCML4 (ENSABRG00000002657) SOBP (ENSABRG00000002678) PDSS2 (ENSABRG00000002702) #7 BEND3 (ENSABRG00000002730) #8 MTRES1 (ENSABRG00000002742) #9 QRSL1 (ENSABRG00000002769) #12 RTN4IP1 (ENSABRG00000002786) #13 CRYBG1 (ENSABRG00000002822) #14 ATG5 (ENSABRG00000002975) #16 PRDM1 (ENSABRG00000003008) #17 PREP (ENSABRG00000003068) #18 POPDC3 (ENSABRG00000003098) #19 BVES (ENSABRG00000003118) #20 LIN28B (ENSABRG00000003182) #21 HACE1 (ENSABRG00000003212) #22 ENSABRG00000003277 Phasianidae ANCESTRAL SPECIES 3 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00940000157179.i.b Japanese quail MODERN SPECIES 21 SCML4 (ENSCJPG00005009429) SOBP (ENSCJPG00005009431) ENSCJPG00005009433 PDSS2 (ENSCJPG00005009434) #7 BEND3 (ENSCJPG00005009435) #8 MTRES1 (ENSCJPG00005009436) #9 QRSL1 (ENSCJPG00005009439) #12 RTN4IP1 (ENSCJPG00005009443) #13 CRYBG1 (ENSCJPG00005009445) #14 ATG5 (ENSCJPG00005009448) #16 PRDM1 (ENSCJPG00005009449) #17 PREP (ENSCJPG00005009454) #18 POPDC3 (ENSCJPG00005009455) #19 BVES (ENSCJPG00005009456) #20 LIN28B (ENSCJPG00005009457) #21 HACE1 (ENSCJPG00005009458) #22 GRIK2 (ENSCJPG00005009466) ASCC3 (ENSCJPG00005009467) SIM1 (ENSCJPG00005009469) PRDM13 (ENSCJPG00005009475) CCNC (ENSCJPG00005009478) ENSCJPG00005009480 USP45 (ENSCJPG00005000057) PNISR (ENSCJPG00005000077) COQ3 (ENSCJPG00005000085) FAXC (ENSCJPG00005000089) FBXL4 (ENSCJPG00005000132) POU3F2 (ENSCJPG00005000151) ENSCJPG00005000175 MMS22L (ENSCJPG00005000231) KLHL32 (ENSCJPG00005000260) Phasianidae_b ANCESTRAL SPECIES 2 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00940000157179.i.b Chicken MODERN SPECIES 22 SCML4 (ENSGALG00010014550) SOBP (ENSGALG00010012445) PDSS2 (ENSGALG00010012466) #7 BEND3 (ENSGALG00010012529) #8 C6orf203 (ENSGALG00010012569) #9 CD24 (ENSGALG00010012582) QRSL1 (ENSGALG00010013016) #12 RTN4IP1 (ENSGALG00010013076) #13 CRYBG1 (ENSGALG00010013160) #14 ATG5 (ENSGALG00010013247) #16 PRDM1 (ENSGALG00010013292) #17 PREP (ENSGALG00010013317) #18 POPDC3 (ENSGALG00010013335) #19 BVES (ENSGALG00010015800) #20 LIN28B (ENSGALG00010013340) #21 HACE1 (ENSGALG00010012419) #22 GRIK2 (ENSGALG00010013006) ASCC3 (ENSGALG00010015140) SIM1 (ENSGALG00010015160) PRDM13 (ENSGALG00010004136) CCNC (ENSGALG00010004238) ENSGALG00010004240 USP45 (ENSGALG00010004249) PNISR (ENSGALG00010004306) COQ3 (ENSGALG00010004329) FAXC (ENSGALG00010004345) FBXL4 (ENSGALG00010004362) POU3F2 (ENSGALG00010004399) MMS22L (ENSGALG00010004373) ENSGALG00010004383 ENSGALG00010004978 Turkey MODERN SPECIES 11 ENSMGAG00000013523 #16 ENSMGAG00000013520 #14 ENSMGAG00000013519 #13 ENSMGAG00000018204 #14 ENSMGAG00000022679 #13 QRSL1 (ENSMGAG00000013518) #12 ENSMGAG00000013515 #8 ENSMGAG00000013517 #9 PDSS2 (ENSMGAG00000013514) #7 ENSMGAG00000013512 ENSMGAG00000021606 ENSMGAG00000020588 PREP (ENSMGAG00000013527) #18 BVES (ENSMGAG00000013529) #20 LIN28B (ENSMGAG00000013531) #21 HACE1 (ENSMGAG00000013533) #22 ENSMGAG00000015902 ENSMGAG00000018221 ENSMGAG00000019904 ENSMGAG00000022447 ENSMGAG00000013594 ENSMGAG00000021109 ENSMGAG00000019925 ENSMGAG00000022529 ENSMGAG00000013562 ENSMGAG00000013560 ENSMGAG00000013558 ENSMGAG00000013556 ENSMGAG00000017048 ENSMGAG00000016616 ENSMGAG00000013555 Neognathae_b ANCESTRAL SPECIES 1 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT01060000248664 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00940000157179.i.b Neognathae_c ANCESTRAL SPECIES 10 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00390000001627 Golden eagle MODERN SPECIES 11 ENSACCG00020006999 ENSACCG00020007009 SOBP (ENSACCG00020007022) PDSS2 (ENSACCG00020007038) #7 BEND3 (ENSACCG00020007047) #8 MTRES1 (ENSACCG00020007067) #9 QRSL1 (ENSACCG00020007083) #12 RTN4IP1 (ENSACCG00020007099) #13 CRYBG1 (ENSACCG00020007223) #14 ATG5 (ENSACCG00020007338) #16 PRDM1 (ENSACCG00020007354) #17 PREP (ENSACCG00020007365) #18 POPDC3 (ENSACCG00020007382) #19 BVES (ENSACCG00020007400) #20 LIN28B (ENSACCG00020007419) #21 HACE1 (ENSACCG00020007438) #22 GRIK2 (ENSACCG00020007485) ASCC3 (ENSACCG00020007539) SIM1 (ENSACCG00020007595) PRDM13 (ENSACCG00020007603) CCNC (ENSACCG00020007612) ENSACCG00020007628 USP45 (ENSACCG00020007646) ENSACCG00020007669 COQ3 (ENSACCG00020007685) FAXC (ENSACCG00020007694) FBXL4 (ENSACCG00020007705) POU3F2 (ENSACCG00020007717) MMS22L (ENSACCG00020007801) KLHL32 (ENSACCG00020007874) NDUFAF4 (ENSACCG00020007902) Kakapo MODERN SPECIES 23 SEC63 (ENSSHBG00005006731) SCML4 (ENSSHBG00005006744) SOBP (ENSSHBG00005006768) PDSS2 (ENSSHBG00005006788) #7 BEND3 (ENSSHBG00005006817) #8 MTRES1 (ENSSHBG00005006842) #9 QRSL1 (ENSSHBG00005006858) #12 RTN4IP1 (ENSSHBG00005006887) #13 CRYBG1 (ENSSHBG00005006932) #14 ATG5 (ENSSHBG00005006968) #16 PRDM1 (ENSSHBG00005006993) #17 PREP (ENSSHBG00005007018) #18 POPDC3 (ENSSHBG00005007036) #19 BVES (ENSSHBG00005007052) #20 LIN28B (ENSSHBG00005007139) #21 HACE1 (ENSSHBG00005007193) #22 GRIK2 (ENSSHBG00005007267) ASCC3 (ENSSHBG00005007565) SIM1 (ENSSHBG00005008456) PRDM13 (ENSSHBG00005008480) CCNC (ENSSHBG00005008489) ENSSHBG00005008496 USP45 (ENSSHBG00005008502) PNISR (ENSSHBG00005008511) COQ3 (ENSSHBG00005008518) ENSSHBG00005008530 FAXC (ENSSHBG00005008534) FBXL4 (ENSSHBG00005008538) POU3F2 (ENSSHBG00005008541) MMS22L (ENSSHBG00005008564) ENSSHBG00005008571 Passeriformes ANCESTRAL SPECIES 2 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT01060000248664 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00940000157179.i.b Great tit MODERN SPECIES 22 ENSPMJG00000015324 ENSPMJG00000015325 SOBP (ENSPMJG00000015326) PDSS2 (ENSPMJG00000015327) #7 BEND3 (ENSPMJG00000015328) #8 MTRES1 (ENSPMJG00000015329) #9 QRSL1 (ENSPMJG00000015332) #12 RTN4IP1 (ENSPMJG00000015333) #13 CRYBG1 (ENSPMJG00000015334) #14 ATG5 (ENSPMJG00000000069) #16 PRDM1 (ENSPMJG00000000106) #17 PREP (ENSPMJG00000000193) #18 POPDC3 (ENSPMJG00000000231) #19 BVES (ENSPMJG00000000259) #20 LIN28B (ENSPMJG00000000304) #21 HACE1 (ENSPMJG00000000330) #22 GRIK2 (ENSPMJG00000000444) ASCC3 (ENSPMJG00000000583) SIM1 (ENSPMJG00000000702) PRDM13 (ENSPMJG00000000769) CCNC (ENSPMJG00000000772) ENSPMJG00000000782 USP45 (ENSPMJG00000000786) ENSPMJG00000000801 COQ3 (ENSPMJG00000000809) FAXC (ENSPMJG00000000817) FBXL4 (ENSPMJG00000000892) ENSPMJG00000000900 MMS22L (ENSPMJG00000001015) KLHL32 (ENSPMJG00000001160) NDUFAF4 (ENSPMJG00000001185) Passeriformes_d ANCESTRAL SPECIES 2 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT01060000248664 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00940000157179.i.b Passeriformes_g ANCESTRAL SPECIES 1 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT01060000248664 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00940000157179.i.b Passeroidea ANCESTRAL SPECIES ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT01060000248664 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00940000157179.i.b Zebra finch MODERN SPECIES 23 ENSTGUG00000012164 ENSTGUG00000027856 SOBP (ENSTGUG00000012167) PDSS2 (ENSTGUG00000012168) #7 BEND3 (ENSTGUG00000012175) #8 MTRES1 (ENSTGUG00000012177) #9 QRSL1 (ENSTGUG00000012180) #12 RTN4IP1 (ENSTGUG00000012187) #13 CRYBG1 (ENSTGUG00000012192) #14 ATG5 (ENSTGUG00000012200) #16 PRDM1 (ENSTGUG00000012204) #17 PREP (ENSTGUG00000012206) #18 POPDC3 (ENSTGUG00000029737) #19 BVES (ENSTGUG00000012218) #20 LIN28B (ENSTGUG00000029445) #21 HACE1 (ENSTGUG00000012227) #22 GRIK2 (ENSTGUG00000012240) ASCC3 (ENSTGUG00000012262) SIM1 (ENSTGUG00000012278) PRDM13 (ENSTGUG00000012280) CCNC (ENSTGUG00000012282) ENSTGUG00000012283 USP45 (ENSTGUG00000012285) ENSTGUG00000012289 COQ3 (ENSTGUG00000012290) FAXC (ENSTGUG00000012293) FBXL4 (ENSTGUG00000012295) POU3F2 (ENSTGUG00000027623) MMS22L (ENSTGUG00000012296) KLHL32 (ENSTGUG00000012306) NDUFAF4 (ENSTGUG00000024097) Common canary MODERN SPECIES 1 SCML4 (ENSSCAG00000000531) ENSSCAG00000000536 SOBP (ENSSCAG00000000565) PDSS2 (ENSSCAG00000000586) #7 BEND3 (ENSSCAG00000000615) #8 MTRES1 (ENSSCAG00000000620) #9 QRSL1 (ENSSCAG00000000635) #12 RTN4IP1 (ENSSCAG00000000647) #13 CRYBG1 (ENSSCAG00000000675) #14 ATG5 (ENSSCAG00000000793) #16 PRDM1 (ENSSCAG00000000801) #17 PREP (ENSSCAG00000000866) #18 POPDC3 (ENSSCAG00000000884) #19 BVES (ENSSCAG00000000898) #20 LIN28B (ENSSCAG00000000914) #21 HACE1 (ENSSCAG00000000966) #22 GRIK2 (ENSSCAG00000001013) ASCC3 (ENSSCAG00000001112) SIM1 (ENSSCAG00000001136) CCNC (ENSSCAG00000001173) ENSSCAG00000001191 USP45 (ENSSCAG00000001208) ENSSCAG00000001235 COQ3 (ENSSCAG00000001250) FAXC (ENSSCAG00000001258) FBXL4 (ENSSCAG00000001276) MMS22L (ENSSCAG00000001309) ENSSCAG00000001341 ENSSCAG00000001354 NDUFAF4 (ENSSCAG00000001361) GPR63 (ENSSCAG00000001379) Medium ground finch MODERN SPECIES 120 MTRES1 (ENSGFOG00000003320) #9 QRSL1 (ENSGFOG00000003330) #12 RTN4IP1 (ENSGFOG00000003362) #13 CRYBG1 (ENSGFOG00000003388) #14 ATG5 (ENSGFOG00000003471) #16 PRDM1 (ENSGFOG00000003493) #17 PREP (ENSGFOG00000003505) #18 POPDC3 (ENSGFOG00000003522) #19 BVES (ENSGFOG00000003528) #20 LIN28B (ENSGFOG00000003550) #21 HACE1 (ENSGFOG00000003561) #22 GRIK2 (ENSGFOG00000003635) Flycatcher MODERN SPECIES 21 OSTM1 (ENSFALG00000027733) SEC63 (ENSFALG00000011739) SCML4 (ENSFALG00000011729) SOBP (ENSFALG00000011712) PDSS2 (ENSFALG00000024360) #7 MTRES1 (ENSFALG00000011688) #9 QRSL1 (ENSFALG00000011682) #12 RTN4IP1 (ENSFALG00000027502) #13 CRYBG1 (ENSFALG00000028843) #14 ATG5 (ENSFALG00000011631) #16 PRDM1 (ENSFALG00000011624) #17 PREP (ENSFALG00000011608) #18 POPDC3 (ENSFALG00000011603) #19 BVES (ENSFALG00000011583) #20 LIN28B (ENSFALG00000023138) #21 HACE1 (ENSFALG00000011548) #22 GRIK2 (ENSFALG00000005281) ASCC3 (ENSFALG00000005260) SIM1 (ENSFALG00000009592) PRDM13 (ENSFALG00000025976) CCNC (ENSFALG00000026662) ENSFALG00000022920 USP45 (ENSFALG00000009614) ENSFALG00000026665 COQ3 (ENSFALG00000024544) ENSFALG00000022998 FAXC (ENSFALG00000009629) FBXL4 (ENSFALG00000009636) POU3F2 (ENSFALG00000026361) MMS22L (ENSFALG00000009642) KLHL32 (ENSFALG00000009649) African ostrich MODERN SPECIES 685 SEC63 (ENSSCUG00000008829) SCML4 (ENSSCUG00000008824) SOBP (ENSSCUG00000008820) PDSS2 (ENSSCUG00000008819) #7 BEND3 (ENSSCUG00000008817) #8 MTRES1 (ENSSCUG00000008816) #9 QRSL1 (ENSSCUG00000008810) #12 RTN4IP1 (ENSSCUG00000008804) #13 CRYBG1 (ENSSCUG00000008797) #14 ATG5 (ENSSCUG00000008790) #16 PRDM1 (ENSSCUG00000008787) #17 PREP (ENSSCUG00000008776) #18 POPDC3 (ENSSCUG00000008774) #19 BVES (ENSSCUG00000008772) #20 LIN28B (ENSSCUG00000008767) #21 HACE1 (ENSSCUG00000008760) #22 ENSSCUG00000008750 Australian saltwater crocodile MODERN SPECIES 38 SCML4 (ENSCPRG00005001262) SOBP (ENSCPRG00005001260) PDSS2 (ENSCPRG00005001243) #7 BEND3 (ENSCPRG00005001204) #8 MTRES1 (ENSCPRG00005001199) #9 QRSL1 (ENSCPRG00005001174) #12 RTN4IP1 (ENSCPRG00005001145) #13 CRYBG1 (ENSCPRG00005001130) #14 ATG5 (ENSCPRG00005001095) #16 PRDM1 (ENSCPRG00005001075) #17 PREP (ENSCPRG00005001045) #18 POPDC3 (ENSCPRG00005001029) #19 BVES (ENSCPRG00005001021) #20 LIN28B (ENSCPRG00005001009) #21 ENSCPRG00005000982 HACE1 (ENSCPRG00005000946) #22 GRIK2 (ENSCPRG00005000722) ASCC3 (ENSCPRG00005000542) SIM1 (ENSCPRG00005000466) MCHR2 (ENSCPRG00005000415) CCNC (ENSCPRG00005000316) ENSCPRG00005000301 USP45 (ENSCPRG00005000289) PNISR (ENSCPRG00005000239) COQ3 (ENSCPRG00005000207) ENSCPRG00005000201 ENSCPRG00005000191 FBXL4 (ENSCPRG00005017365) POU3F2 (ENSCPRG00005017364) MMS22L (ENSCPRG00005017353) ENSCPRG00005017350 Cryptodira ANCESTRAL SPECIES 1 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a Testudinoidea ANCESTRAL SPECIES 12 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719.l ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a Testudinidae ANCESTRAL SPECIES 10 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719.l ENSGT00940000157719.k ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00390000011769 ENSGT00940000157179.i.a Goode s thornscrub tortoise MODERN SPECIES 17 ENSGEVG00005009741 ENSGEVG00005009696 SOBP (ENSGEVG00005009603) PDSS2 (ENSGEVG00005009557) #7 BEND3 (ENSGEVG00005009513) #8 MTRES1 (ENSGEVG00005009472) #9 QRSL1 (ENSGEVG00005009425) #12 RTN4IP1 (ENSGEVG00005009393) #13 CRYBG1 (ENSGEVG00005009083) #14 ATG5 (ENSGEVG00005009020) #16 PRDM1 (ENSGEVG00005003790) #17 PREP (ENSGEVG00005003770) #18 POPDC3 (ENSGEVG00005003754) #19 BVES (ENSGEVG00005003745) #20 LIN28B (ENSGEVG00005003726) #21 HACE1 (ENSGEVG00005003662) #22 ENSGEVG00005003633 GRIK2 (ENSGEVG00005003385) ASCC3 (ENSGEVG00005003199) SIM1 (ENSGEVG00005003172) MCHR2 (ENSGEVG00005003158) PRDM13 (ENSGEVG00005003148) CCNC (ENSGEVG00005003129) ENSGEVG00005003119 USP45 (ENSGEVG00005003090) PNISR (ENSGEVG00005003075) COQ3 (ENSGEVG00005003062) FAXC (ENSGEVG00005003024) FBXL4 (ENSGEVG00005003000) POU3F2 (ENSGEVG00005002991) ENSGEVG00005002975 Abingdon island giant tortoise MODERN SPECIES 960 QRSL1 (ENSCABG00000007404) #12 RTN4IP1 (ENSCABG00000007399) #13 ENSCABG00000007393 #14 ATG5 (ENSCABG00000007392) #16 PRDM1 (ENSCABG00000007382) #17 ENSCABG00000007378 ENSCABG00000007376 PREP (ENSCABG00000007366) #18 POPDC3 (ENSCABG00000007362) #19 BVES (ENSCABG00000007361) #20 LIN28B (ENSCABG00000007359) #21 HACE1 (ENSCABG00000006618) #22 Emydidae ANCESTRAL SPECIES 8 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719.l ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a Three-toed box turtle MODERN SPECIES 15 ENSTMTG00000001027 SOBP (ENSTMTG00000001041) PDSS2 (ENSTMTG00000001055) #7 BEND3 (ENSTMTG00000001065) #8 ENSTMTG00000001079 MTRES1 (ENSTMTG00000001088) #9 QRSL1 (ENSTMTG00000001095) #12 RTN4IP1 (ENSTMTG00000001116) #13 CRYBG1 (ENSTMTG00000001144) #14 ATG5 (ENSTMTG00000001175) #16 PRDM1 (ENSTMTG00000001194) #17 PREP (ENSTMTG00000001210) #18 POPDC3 (ENSTMTG00000001226) #19 BVES (ENSTMTG00000001231) #20 LIN28B (ENSTMTG00000001243) #21 HACE1 (ENSTMTG00000001261) #22 GRIK2 (ENSTMTG00000001374) ASCC3 (ENSTMTG00000001886) SIM1 (ENSTMTG00000002156) MCHR2 (ENSTMTG00000002173) PRDM13 (ENSTMTG00000002183) CCNC (ENSTMTG00000002189) ENSTMTG00000002198 USP45 (ENSTMTG00000002207) PNISR (ENSTMTG00000002242) COQ3 (ENSTMTG00000002247) FAXC (ENSTMTG00000002256) FBXL4 (ENSTMTG00000002265) POU3F2 (ENSTMTG00000002271) MMS22L (ENSTMTG00000002281) KLHL32 (ENSTMTG00000002330) painted turtle MODERN SPECIES 2422 SEC63 (ENSCPBG00000006213) SCML4 (ENSCPBG00000006199) SOBP (ENSCPBG00000006184) PDSS2 (ENSCPBG00000006170) #7 BEND3 (ENSCPBG00000006167) #8 MTRES1 (ENSCPBG00000006157) #9 QRSL1 (ENSCPBG00000006147) #12 RTN4IP1 (ENSCPBG00000006136) #13 CRYBG1 (ENSCPBG00000004238) #14 ATG5 (ENSCPBG00000004179) #16 PRDM1 (ENSCPBG00000004165) #17 PREP (ENSCPBG00000004147) #18 POPDC3 (ENSCPBG00000004134) #19 BVES (ENSCPBG00000004119) #20 LIN28B (ENSCPBG00000004104) #21 HACE1 (ENSCPBG00000004045) #22 ENSCPBG00000003987 ENSCPBG00000003981 GRIK2 (ENSCPBG00000003946) ASCC3 (ENSCPBG00000003881) SIM1 (ENSCPBG00000003844) MCHR2 (ENSCPBG00000003828) PRDM13 (ENSCPBG00000003808) CCNC (ENSCPBG00000003793) ENSCPBG00000003781 PASK (ENSCPBG00000003758) ENSCPBG00000003733 USP45 (ENSCPBG00000003656) PNISR (ENSCPBG00000003613) COQ3 (ENSCPBG00000003600) FAXC (ENSCPBG00000003584) Chinese turtle MODERN SPECIES 717 ENSPSIG00000002700 #14 ATG5 (ENSPSIG00000002664) #16 PRDM1 (ENSPSIG00000002661) #17 PREP (ENSPSIG00000002644) #18 BVES (ENSPSIG00000002639) #20 LIN28B (ENSPSIG00000002635) #21 HACE1 (ENSPSIG00000002633) #22 GRIK2 (ENSPSIG00000002627) ENSPSIG00000002623 ENSPSIG00000002620 SIM1 (ENSPSIG00000002579) MCHR2 (ENSPSIG00000002570) PRDM13 (ENSPSIG00000002567) ENSPSIG00000001440 CCNC (ENSPSIG00000002562) ENSPSIG00000002560 USP45 (ENSPSIG00000002556) PNISR (ENSPSIG00000002547) COQ3 (ENSPSIG00000002536) FAXC (ENSPSIG00000002534) FBXL4 (ENSPSIG00000002517) ENSPSIG00000001431 Lepidosauria ANCESTRAL SPECIES ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00940000157179.i.b Episquamata ANCESTRAL SPECIES ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00390000001627 Toxicofera ANCESTRAL SPECIES ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00390000001627 Elapidae ANCESTRAL SPECIES ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00390000001627 Elapidae_a ANCESTRAL SPECIES 6 ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866.a #12 ENSGT00550000074866.b #12 ENSGT00880000138028.b.b.h #13 ENSGT00880000138028.b.b.g #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164601 ENSGT00940000157719.m ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00390000001627 ENSGT00950000183001.a.b.a Acanthophiinae ANCESTRAL SPECIES 8 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00960000190953 ENSGT00550000074866.b #12 ENSGT00880000138028.b.b.h #13 ENSGT00880000138028.b.b.g #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000164601 ENSGT00940000157719.m ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00390000001627 ENSGT00950000183001.a.b.a Eastern brown snake MODERN SPECIES 4 SOBP (ENSPTXG00000006898) PDSS2 (ENSPTXG00000006900) #7 BEND3 (ENSPTXG00000006903) #8 MTRES1 (ENSPTXG00000006904) #9 ENSPTXG00000006905 ENSPTXG00000006906 #12 ENSPTXG00000006907 #12 RTN4IP1 (ENSPTXG00000006908) #13 CRYBG1 (ENSPTXG00000006909) #14 ATG5 (ENSPTXG00000006911) #16 PRDM1 (ENSPTXG00000006912) #17 PREP (ENSPTXG00000006913) #18 POPDC3 (ENSPTXG00000006914) #19 BVES (ENSPTXG00000006915) #20 LIN28B (ENSPTXG00000006916) #21 HACE1 (ENSPTXG00000006917) #22 GRIK2 (ENSPTXG00000006929) ENSPTXG00000007616 ASCC3 (ENSPTXG00000007623) SIM1 (ENSPTXG00000007685) PRDM13 (ENSPTXG00000007686) CCNC (ENSPTXG00000007689) ENSPTXG00000007690 USP45 (ENSPTXG00000007692) PNISR (ENSPTXG00000007694) COQ3 (ENSPTXG00000007696) FAXC (ENSPTXG00000007699) FBXL4 (ENSPTXG00000007702) POU3F2 (ENSPTXG00000007705) ENSPTXG00000007707 MMS22L (ENSPTXG00000007709) Mainland tiger snake MODERN SPECIES 16 SOBP (ENSNSUG00000018101) PDSS2 (ENSNSUG00000018098) #7 BEND3 (ENSNSUG00000018097) #8 MTRES1 (ENSNSUG00000018096) #9 ENSNSUG00000018094 QRSL1 (ENSNSUG00000018093) #12 ENSNSUG00000018092 #13 ENSNSUG00000018090 #13 CRYBG1 (ENSNSUG00000018073) #14 ATG5 (ENSNSUG00000018071) #16 PRDM1 (ENSNSUG00000018069) #17 PREP (ENSNSUG00000017917) #18 POPDC3 (ENSNSUG00000017913) #19 BVES (ENSNSUG00000017912) #20 LIN28B (ENSNSUG00000017911) #21 HACE1 (ENSNSUG00000017909) #22 GRIK2 (ENSNSUG00000017907) ASCC3 (ENSNSUG00000017904) SIM1 (ENSNSUG00000017903) PRDM13 (ENSNSUG00000017902) CCNC (ENSNSUG00000017884) ENSNSUG00000017883 USP45 (ENSNSUG00000017882) PNISR (ENSNSUG00000017881) COQ3 (ENSNSUG00000017880) FAXC (ENSNSUG00000017879) FBXL4 (ENSNSUG00000017878) MMS22L (ENSNSUG00000017876) ENSNSUG00000017875 ENSNSUG00000017874 NDUFAF4 (ENSNSUG00000017873) Blue-lipped sea krait MODERN SPECIES 6556 HACE1 (ENSLLTG00000010708) #22 Indian cobra MODERN SPECIES SCML4 (ENSNNAG00000001175) SOBP (ENSNNAG00000001188) PDSS2 (ENSNNAG00000001202) #7 BEND3 (ENSNNAG00000001219) #8 MTRES1 (ENSNNAG00000001224) #9 ENSNNAG00000001237 QRSL1 (ENSNNAG00000001246) #12 RTN4IP1 (ENSNNAG00000001272) #13 CRYBG1 (ENSNNAG00000001368) #14 ATG5 (ENSNNAG00000001541) #16 PRDM1 (ENSNNAG00000001559) #17 PREP (ENSNNAG00000001576) #18 POPDC3 (ENSNNAG00000001593) #19 BVES (ENSNNAG00000001601) #20 LIN28B (ENSNNAG00000001614) #21 HACE1 (ENSNNAG00000001627) #22 GRIK2 (ENSNNAG00000002042) ASCC3 (ENSNNAG00000002415) SIM1 (ENSNNAG00000002455) PRDM13 (ENSNNAG00000002464) CCNC (ENSNNAG00000002473) ENSNNAG00000002486 USP45 (ENSNNAG00000002498) PNISR (ENSNNAG00000002535) COQ3 (ENSNNAG00000002557) FAXC (ENSNNAG00000002571) FBXL4 (ENSNNAG00000002586) POU3F2 (ENSNNAG00000002590) MMS22L (ENSNNAG00000002613) KLHL32 (ENSNNAG00000002678) NDUFAF4 (ENSNNAG00000002699) Lizard MODERN SPECIES 1042 PREP (ENSACAG00000003768) #18 POPDC3 (ENSACAG00000026265) #19 BVES (ENSACAG00000003910) #20 LIN28B (ENSACAG00000003957) #21 HACE1 (ENSACAG00000003993) #22 ENSACAG00000035167 ENSACAG00000038309 Laterata ANCESTRAL SPECIES 4 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000160200 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 ENSGT00390000011769 ENSGT00940000157179.i.a ENSGT00390000001627 Argentine black and white tegu MODERN SPECIES 2 SEC63 (ENSSMRG00000013310) SCML4 (ENSSMRG00000013314) SOBP (ENSSMRG00000013316) PDSS2 (ENSSMRG00000013317) #7 BEND3 (ENSSMRG00000013319) #8 MTRES1 (ENSSMRG00000013320) #9 QRSL1 (ENSSMRG00000013322) #12 RTN4IP1 (ENSSMRG00000013323) #13 CRYBG1 (ENSSMRG00000013325) #14 ATG5 (ENSSMRG00000013331) #16 PRDM1 (ENSSMRG00000013332) #17 PREP (ENSSMRG00000013333) #18 POPDC3 (ENSSMRG00000013334) #19 BVES (ENSSMRG00000013335) #20 LIN28B (ENSSMRG00000013336) #21 HACE1 (ENSSMRG00000013337) #22 ENSSMRG00000013339 GRIK2 (ENSSMRG00000013342) ASCC3 (ENSSMRG00000013348) SIM1 (ENSSMRG00000013349) PRDM13 (ENSSMRG00000013350) CCNC (ENSSMRG00000013351) ENSSMRG00000013352 USP45 (ENSSMRG00000013353) PNISR (ENSSMRG00000013354) COQ3 (ENSSMRG00000013355) FAXC (ENSSMRG00000013356) FBXL4 (ENSSMRG00000013357) POU3F2 (ENSSMRG00000013358) MMS22L (ENSSMRG00000013360) KLHL32 (ENSSMRG00000013361) tuatara MODERN SPECIES 280 PREP (ENSSPUG00000013185) #18 POPDC3 (ENSSPUG00000013202) #19 BVES (ENSSPUG00000013206) #20 LIN28B (ENSSPUG00000013225) #21 HACE1 (ENSSPUG00000013244) #22 Anura ANCESTRAL SPECIES 8 ENSGT00390000001965 ENSGT00940000157463 ENSGT00940000154164.c ENSGT00940000153498.B.b #7 ENSGT00390000010827 #8 ENSGT00390000009366 #9 ENSGT00550000074866 #12 ENSGT00880000138028.b.b #13 ENSGT00940000155695 #14 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143 ENSGT00940000154272.A ENSGT00940000160200 ENSGT00940000164536 ENSGT00940000155625 ENSGT00940000163155 ENSGT00940000157719 ENSGT00730000111138 ENSGT01060000248664 ENSGT00390000007284 ENSGT00950000182919.A ENSGT00940000155184 ENSGT00940000162208 Frog MODERN SPECIES 5 sobp (ENSXETG00000019261) pdss2 (ENSXETG00000019263) #8 mtres1 (ENSXETG00000019267) #9 ENSXETG00000042232 qrsl1 (ENSXETG00000027717) #12 rtn4ip1 (ENSXETG00000019269) #13 crybg1 (ENSXETG00000019268) #14 ENSXETG00000047416 atg5 (ENSXETG00000008672) #16 prdm1 (ENSXETG00000008674) #17 ENSXETG00000049046 prep (ENSXETG00000013305) #18 bves (ENSXETG00000013301) #20 ENSXETG00000047073 lin28b (ENSXETG00000035037) #21 hace1 (ENSXETG00000013282) #22 ENSXETG00000042615 ENSXETG00000044223 ENSXETG00000042826 ENSXETG00000042621 grik2 (ENSXETG00000013277) ENSXETG00000038932 ascc3 (ENSXETG00000032212) sim1 (ENSXETG00000002406) mchr2 (ENSXETG00000029969) prdm13 (ENSXETG00000032719) des.2 (ENSXETG00000006876) ccnc (ENSXETG00000026026) ENSXETG00000039161 usp45 (ENSXETG00000006872) faxc (ENSXETG00000000797) Leishan spiny toad MODERN SPECIES 7 BEND3 (ENSLLEG00000014794) #8 QRSL1 (ENSLLEG00000014906) #12 ENSLLEG00000015371 RTN4IP1 (ENSLLEG00000015388) #13 CRYBG1 (ENSLLEG00000015541) #14 ENSLLEG00000015884 ATG5 (ENSLLEG00000015928) #16 PRDM1 (ENSLLEG00000016024) #17 PREP (ENSLLEG00000016113) #18 ENSLLEG00000016433 BVES (ENSLLEG00000016474) #20 POPDC3 (ENSLLEG00000016822) #19 ENSLLEG00000016881 LIN28B (ENSLLEG00000016986) #21 ENSLLEG00000017051 HACE1 (ENSLLEG00000017141) #22 ENSLLEG00000018622 ENSLLEG00000018642 GRIK2 (ENSLLEG00000018681) ENSLLEG00000018981 ASCC3 (ENSLLEG00000019022) SIM1 (ENSLLEG00000019320) ENSLLEG00000019490 MCHR2 (ENSLLEG00000019663) PRDM13 (ENSLLEG00000019736) ENSLLEG00000019785 CCNC (ENSLLEG00000019916) ENSLLEG00000020142 USP45 (ENSLLEG00000020192) ENSLLEG00000020416 CNR1 (ENSLLEG00000020460) Coelacanth MODERN SPECIES 757 LIN28B (ENSLACG00000004053) #21 HACE1 (ENSLACG00000008087) #22 Actinopterygii ANCESTRAL SPECIES 216 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143.a.b ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000155695 #14 ENSGT00390000013853 ENSGT00390000004263.a ENSGT00950000182995.e.b ENSGT00940000159405 ENSGT00940000156357 ENSGT00390000013305.a.b Reedfish MODERN SPECIES 11 bckdhb (ENSECRG00000002292) tent5ab (ENSECRG00000002265) IBTK (ENSECRG00000002235) tpbgb (ENSECRG00000002220) ENSECRG00000002209 ube3d (ENSECRG00000002194) ENSECRG00000002173 ENSECRG00000002162 ENSECRG00000002152 atg5 (ENSECRG00000002133) #16 prdm1a (ENSECRG00000002117) #17 prep (ENSECRG00000002083) #18 popdc3 (ENSECRG00000002057) #19 bves (ENSECRG00000002028) #20 lin28b (ENSECRG00000001972) #21 HACE1 (ENSECRG00000001907) #22 ENSECRG00000001886 GRIK2 (ENSECRG00000001851) ASCC3 (ENSECRG00000001635) sim1a (ENSECRG00000001559) CYB5R4 (ENSECRG00000001521) mrap2a (ENSECRG00000001507) CEP162 (ENSECRG00000001445) ENSECRG00000001379 #14 rtn4ip1 (ENSECRG00000001347) #13 mtres1 (ENSECRG00000001319) #9 bend3 (ENSECRG00000001297) #8 pdss2 (ENSECRG00000001266) #7 sobpa (ENSECRG00000001248) ENSECRG00000001232 SCML4 (ENSECRG00000001212) Neopterygii ANCESTRAL SPECIES 5 ENSGT00390000001962 ENSGT00880000138038 ENSGT00390000000358 ENSGT00940000157815 ENSGT01030000234912 ENSGT00390000018131 ENSGT00940000165475 ENSGT00510000047616.b ENSGT00940000155141.w.b ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143.a.b ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000155695 #14 ENSGT00940000156357 ENSGT00390000013305.a.b Spotted gar MODERN SPECIES 647 ECHDC1 (ENSLOCG00000016511) rnf146 (ENSLOCG00000016513) rspo3 (ENSLOCG00000016514) ENSLOCG00000016516 cenpw (ENSLOCG00000016517) trmt11 (ENSLOCG00000016519) ENSLOCG00000016521 hint3 (ENSLOCG00000016523) NCOA7 (ENSLOCG00000016524) atg5 (ENSLOCG00000016528) #16 prdm1a (ENSLOCG00000016531) #17 prep (ENSLOCG00000016532) #18 popdc3 (ENSLOCG00000016535) #19 bves (ENSLOCG00000016536) #20 lin28b (ENSLOCG00000016539) #21 HACE1 (ENSLOCG00000016540) #22 GRIK2 (ENSLOCG00000016542) ASCC3 (ENSLOCG00000016550) sim1a (ENSLOCG00000016561) ENSLOCG00000016562 CYB5R4 (ENSLOCG00000016563) mrap2a (ENSLOCG00000016569) cep162 (ENSLOCG00000016570) ENSLOCG00000016575 #14 rtn4ip1 (ENSLOCG00000016579) #13 qrsl1 (ENSLOCG00000016582) #12 mtres1 (ENSLOCG00000016585) #9 bend3 (ENSLOCG00000016586) #8 pdss2 (ENSLOCG00000016588) #7 sobpa (ENSLOCG00000016593) SCML4 (ENSLOCG00000016595) Osteoglossocephalai ANCESTRAL SPECIES 61 ENSGT00880000138038 ENSGT00390000000358 ENSGT00940000157815.b ENSGT00940000157815.a ENSGT01030000234912 ENSGT00390000018131 ENSGT00940000165475 ENSGT00510000047616.b ENSGT00940000155141.w.b ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00390000004263.a.d.b ENSGT00950000182995.e.b.`b ENSGT00940000156357 ENSGT00390000013305.a.b ENSGT00940000153446.a.a.w.b ENSGT00390000003465.a ENSGT00940000155788.l ENSGT00940000163010 ENSGT00390000018415 Osteoglossiformes ANCESTRAL SPECIES 311 ENSGT00390000018131 ENSGT00510000047616.b ENSGT00940000165475 ENSGT00940000155141.w.b ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a.a #17 ENSGT00530000063426.b.b #18 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610 ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 Asian bonytongue MODERN SPECIES 23 kpna5 (ENSSFOG00015011018) gprc6a (ENSSFOG00015010941) vegfaa (ENSSFOG00015010876) CNIH4 (ENSSFOG00015029508) wdr26b (ENSSFOG00015010778) preb (ENSSFOG00015010702) lyplal1 (ENSSFOG00015010749) ENSSFOG00015031838 ENSSFOG00015010684 atg5 (ENSSFOG00015032429) #16 prdm1a (ENSSFOG00015010649) #17 prep (ENSSFOG00015010595) #18 popdc3 (ENSSFOG00015031208) #19 bves (ENSSFOG00015010576) #20 lin28b (ENSSFOG00015010561) #21 HACE1 (ENSSFOG00015010479) #22 GRIK2 (ENSSFOG00015010394) ASCC3 (ENSSFOG00015010273) sim1a (ENSSFOG00015010231) cyb5r4 (ENSSFOG00015010191) mrap2a (ENSSFOG00015026546) cep162 (ENSSFOG00015010130) ENSSFOG00015024453 ADGRB1 (ENSSFOG00015010029) ENSSFOG00015032006 ENSSFOG00015032075 ENSSFOG00015028611 bmper (ENSSFOG00015009907) BBS9 (ENSSFOG00015009775) nt5c3a (ENSSFOG00015009761) rrp15 (ENSSFOG00015026965) P. kingsleyae MODERN SPECIES 80 ENSPKIG00000012737 ENSPKIG00000012749 ENSPKIG00000012767 ENSPKIG00000012777 glb1 (ENSPKIG00000012804) trmt11 (ENSPKIG00000012868) hint3 (ENSPKIG00000012913) ENSPKIG00000012928 ENSPKIG00000012940 atg5 (ENSPKIG00000012978) #16 prdm1a (ENSPKIG00000013054) #17 prep (ENSPKIG00000013135) #18 popdc3 (ENSPKIG00000013198) #19 bves (ENSPKIG00000013243) #20 lin28b (ENSPKIG00000013309) #21 HACE1 (ENSPKIG00000013369) #22 ENSPKIG00000013489 GRIK2 (ENSPKIG00000013540) ASCC3 (ENSPKIG00000013639) sim1a (ENSPKIG00000013759) ENSPKIG00000013824 s100a11 (ENSPKIG00000013840) ENSPKIG00000013873 flad1 (ENSPKIG00000013919) ENSPKIG00000013934 efna3b (ENSPKIG00000013966) efna1b (ENSPKIG00000013998) slc50a1 (ENSPKIG00000014019) krtcap2 (ENSPKIG00000014039) TRIM46 (ENSPKIG00000014081) s100a10b (ENSPKIG00000014135) Clupeocephala ANCESTRAL SPECIES 407 ENSGT00940000166060 ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 Otomorpha ANCESTRAL SPECIES 324 ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610.o.a.c ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00500000044921.b Clupeiformes ANCESTRAL SPECIES 258 ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610.o.a.c ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000157845 ENSGT00940000159017.a.a ENSGT00940000162584.i.a ENSGT00940000162584.j ENSGT00940000157640 ENSGT00940000164984 ENSGT01000000214440.A.a.a ENSGT00940000157432.B ENSGT00500000044921.b Atlantic herring MODERN SPECIES 2 ARID1A (ENSCHAG00000011660) ENSCHAG00000013222 gpn2 (ENSCHAG00000013470) gpatch3 (ENSCHAG00000013497) nr0b2a (ENSCHAG00000013503) KDF1 (ENSCHAG00000013512) tpbgl (ENSCHAG00000013521) tmem222a (ENSCHAG00000013528) wdtc1 (ENSCHAG00000013568) fut7 (ENSCHAG00000013598) ENSCHAG00000013605 STX12 (ENSCHAG00000013613) popdc3 (ENSCHAG00000013622) #19 bves (ENSCHAG00000013628) #20 LIN28B (ENSCHAG00000013701) #21 HACE1 (ENSCHAG00000013710) #22 GRIK2 (ENSCHAG00000013969) ENSCHAG00000015161 ASCC3 (ENSCHAG00000015189) sim1a (ENSCHAG00000015763) cyb5r4 (ENSCHAG00000015846) mrap2a (ENSCHAG00000015885) cep162 (ENSCHAG00000015891) NOD1 (ENSCHAG00000015908) znrf2b (ENSCHAG00000016044) fzd1 (ENSCHAG00000016069) cdk14 (ENSCHAG00000016100) ENSCHAG00000016347 ENSCHAG00000016355 ADGRB1 (ENSCHAG00000016372) ENSCHAG00000016850 Denticle herring MODERN SPECIES 15 csf3r (ENSDCDG00000016649) mrps15 (ENSDCDG00000016644) OSCP1 (ENSDCDG00000016632) STK40 (ENSDCDG00000016626) eva1ba (ENSDCDG00000016622) sh3d21 (ENSDCDG00000016619) THRAP3 (ENSDCDG00000016601) map7d1a (ENSDCDG00000016562) MAP3K6 (ENSDCDG00000016278) SNIP1 (ENSDCDG00000016195) ENSDCDG00000016180 ENSDCDG00000016171 popdc3 (ENSDCDG00000016167) #19 bves (ENSDCDG00000016159) #20 LIN28B (ENSDCDG00000016121) #21 HACE1 (ENSDCDG00000016081) #22 ENSDCDG00000016059 ENSDCDG00000016058 GRIK2 (ENSDCDG00000014913) ASCC3 (ENSDCDG00000014836) sim1a (ENSDCDG00000014778) cyb5r4 (ENSDCDG00000014749) ENSDCDG00000014733 mrap2a (ENSDCDG00000014723) ENSDCDG00000014707 gpd1c (ENSDCDG00000014674) LYPD1 (ENSDCDG00000014655) ENSDCDG00000014109 ENSDCDG00000025142 nup155 (ENSDCDG00000025099) ENSDCDG00000025087 Otophysi ANCESTRAL SPECIES 342 ENSGT00390000004766 #16 ENSGT00940000154798.a.d.a #17 ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610.o.a.c ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 Characiphysae ANCESTRAL SPECIES ENSGT00390000015364.b ENSGT00390000016054.b.i ENSGT00940000153295.a.a ##21 ENSGT00940000156592 ENSGT00950000183182.a.a ENSGT00390000010045.s ENSGT00530000063770.c.a ENSGT00940000156115.d ENSGT00940000161527.`b ENSGT00390000003312 ENSGT00940000165224.a.b ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610.o.a.c ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00550000074836.p ENSGT00940000164060.m ENSGT00940000158727.b.a.a.b ENSGT00940000164060.n.a ENSGT00940000158727.a.f ENSGT00940000166120 ENSGT00940000165835.a ENSGT00940000161392 ENSGT00940000156631.A ENSGT01050000244883.C.g.a ENSGT01050000244883.C.g.b Characiphysae_b ANCESTRAL SPECIES 2 ENSGT00390000015364.b ENSGT00390000016054.b.i ENSGT00940000153295.a.a ##21 ENSGT00940000156592 ENSGT00950000183182.a.a ENSGT00390000010045.s ENSGT00530000063770.c.a ENSGT00940000156115.d ENSGT00940000161527.`b ENSGT00390000003312 ENSGT00940000165224.a.b ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610.o.a.c ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00550000074836.p ENSGT00940000164060.m ENSGT00940000158727.b.a.a.b ENSGT00940000164060.n.a ENSGT00940000158727.a.f ENSGT00940000166120 ENSGT00940000165835.a ENSGT00940000161392 ENSGT00940000156631.A ENSGT01050000244883.C.g.a ENSGT01050000244883.C.g.b Characoidei ANCESTRAL SPECIES 7 ENSGT00940000153295.a.a ##21 ENSGT00940000156592 ENSGT00950000183182.a.a ENSGT00390000010045.s ENSGT00530000063770.c.a ENSGT00940000156115.d ENSGT00940000161527.`b ENSGT00390000003312 ENSGT00940000165224.a.b ENSGT00390000000259.k.a ENSGT00940000166060 ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610.o.a.c ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00550000074836.p ENSGT00940000164060.m ENSGT00940000158727.b.a.a.b ENSGT00940000164060.n.a ENSGT00940000158727.a.f ENSGT00940000166120 ENSGT00940000165835.a ENSGT00940000161392 ENSGT00940000156631.A ENSGT01050000244883.C.g.a ENSGT01050000244883.C.g.b Red-bellied piranha MODERN SPECIES 138 yrdc (ENSPNAG00000015625) MANEAL (ENSPNAG00000015638) LIN28A (ENSPNAG00000015739) ##21 mecr (ENSPNAG00000015792) smpdl3b (ENSPNAG00000015833) rpa2 (ENSPNAG00000015868) THEMIS2 (ENSPNAG00000015920) ppp1r8b (ENSPNAG00000015958) cyp4t8 (ENSPNAG00000015974) ENSPNAG00000015986 ENSPNAG00000015994 ENSPNAG00000016042 popdc3 (ENSPNAG00000016050) #19 bves (ENSPNAG00000016089) #20 LIN28B (ENSPNAG00000016114) #21 HACE1 (ENSPNAG00000016195) #22 GRIK2 (ENSPNAG00000016277) ENSPNAG00000016292 ASCC3 (ENSPNAG00000016413) sim1a (ENSPNAG00000016463) Mexicana tetra MODERN SPECIES 1 MANEAL (ENSAMXG00000040401) LIN28A (ENSAMXG00000042088) ##21 mecr (ENSAMXG00000001544) smpdl3b (ENSAMXG00000001519) rpa2 (ENSAMXG00000037936) THEMIS2 (ENSAMXG00000030290) ppp1r8b (ENSAMXG00000043605) cyp4t8 (ENSAMXG00000031435) med18 (ENSAMXG00000039594) ENSAMXG00000031626 ENSAMXG00000029240 ENSAMXG00000030897 popdc3 (ENSAMXG00000001455) #19 bves (ENSAMXG00000001448) #20 LIN28B (ENSAMXG00000001433) #21 HACE1 (ENSAMXG00000001422) #22 ENSAMXG00000036324 eny2 (ENSAMXG00000035549) gdf6a (ENSAMXG00000034181) sybu (ENSAMXG00000033702) ebag9 (ENSAMXG00000038829) zdhhc3a (ENSAMXG00000020408) tmem42a (ENSAMXG00000020407) zgc:77056 (ENSAMXG00000020405) gpd1l (ENSAMXG00000020404) ENSAMXG00000040471 OSBPL10 (ENSAMXG00000020402) stt3b (ENSAMXG00000035226) tgfbr2b (ENSAMXG00000020393) rbms3 (ENSAMXG00000020388) ENSAMXG00000034685 Electric eel MODERN SPECIES 620 smpdl3b (ENSEEEG00000020896) rpa2 (ENSEEEG00000020892) ENSEEEG00000020891 ppp1r8b (ENSEEEG00000020880) cyp4t8 (ENSEEEG00000020874) cyp4t8 (ENSEEEG00000020817) med18 (ENSEEEG00000020813) ENSEEEG00000020806 TRNAU1AP (ENSEEEG00000020804) ENSEEEG00000020800 popdc3 (ENSEEEG00000020798) #19 bves (ENSEEEG00000020794) #20 LIN28B (ENSEEEG00000020791) #21 HACE1 (ENSEEEG00000020787) #22 Channel catfish MODERN SPECIES mecr (ENSIPUG00000014921) smpdl3b (ENSIPUG00000014863) Rpa2 (ENSIPUG00000014790) themis2 (ENSIPUG00000014758) Ppp1r8 (ENSIPUG00000014723) cyp4t8 (ENSIPUG00000014649) ENSIPUG00000014622 ENSIPUG00000014611 cyp4t8 (ENSIPUG00000014509) med18 (ENSIPUG00000014453) ENSIPUG00000014433 STX12 (ENSIPUG00000014383) POPDC3 (ENSIPUG00000014364) #19 bves (ENSIPUG00000014337) #20 LIN28B (ENSIPUG00000014304) #21 hace1 (ENSIPUG00000014204) #22 GRIK2 (ENSIPUG00000014117) BET1L (ENSIPUG00000014105) ascc3 (ENSIPUG00000013863) sim1 (ENSIPUG00000013228) cyb5r4 (ENSIPUG00000013073) YME1L1 (ENSIPUG00000013009) ENSIPUG00000012989 fasn2 (ENSIPUG00000012972) RDH12 (ENSIPUG00000012917) DDX6 (ENSIPUG00000012823) ENSIPUG00000012787 cblc (ENSIPUG00000012760) ENSIPUG00000012744 tryp (ENSIPUG00000012702) ENSIPUG00000012680 Cyprinoidei ANCESTRAL SPECIES 283 ENSGT00940000155839 #22 ENSGT00940000155610.o.a.c ENSGT00940000155377 ENSGT00940000156143.a.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 295 ENSGT00940000153295.a.a.b ##21 ENSGT01090000260030.a.b.a.a.b.a.a.a.b.b.b.a.b.b.b.a.b ENSGT00940000157291.g.a.a ENSGT00940000156762.c.a ENSGT00990000203803 ENSGT00940000155107.a.a.a.d ENSGT00940000155107.a.a.a.c ENSGT00940000159465.g ENSGT00940000158915.f ENSGT00940000159465.h.a ENSGT00940000158915.e ENSGT00940000155536 ENSGT00950000182996.b.a.a.b.d.b.a.a.a.a ENSGT00940000155839.i #22 ENSGT00940000155610.o.a.c.a.b ENSGT00940000155610.o.a.c.b ENSGT00940000155377 ENSGT00940000156143.a.a.g ENSGT01000000214440.A.a.b.a.g.b.b.a ENSGT00940000154798.a.d.a.c #17 ENSGT00390000004766.e.a #16 ENSGT00390000003312.c ENSGT00940000165224.a.b.a ENSGT00940000153979.B.a ENSGT00390000012959.b.g ENSGT00390000006983.a.b.a ENSGT00940000156485.l ENSGT00390000000803.e ENSGT00390000014801.k Goldfish MODERN SPECIES 7 ENSCARG00000017013 ENSCARG00000017009 smpdl3b (ENSCARG00000017003) LIN28A (ENSCARG00000017001) ##21 ENSCARG00000016997 mtf1 (ENSCARG00000016975) INPP5B (ENSCARG00000016203) ENSCARG00000016172 ZC3H12A (ENSCARG00000016167) ENSCARG00000016158 ENSCARG00000016153 GRIK3 (ENSCARG00000015279) csf3r (ENSCARG00000015232) cyb5r4 (ENSCARG00000015193) ENSCARG00000015182 HACE1 (ENSCARG00000015044) #22 prdm1a (ENSCARG00000015012) #17 atg5 (ENSCARG00000014991) #16 med18 (ENSCARG00000014978) ENSCARG00000014968 ENSCARG00000014966 sri (ENSCARG00000014929) nt5c3a (ENSCARG00000014552) bmper (ENSCARG00000013960) BBS9 (ENSCARG00000013906) eaf1 (ENSCARG00000013882) pmvk (ENSCARG00000013877) ARHGEF2 (ENSCARG00000012050) ENSCARG00000011977 ENSCARG00000011971 SALL3 (ENSCARG00000011969) Cyprininae_a ANCESTRAL SPECIES 244 ENSGT00950000183182.a.a ENSGT00940000156592 ENSGT00940000153295.a.a.a ##21 ENSGT00940000163299.B.a.b.d.b.a.b.b.b.a ENSGT00390000015364.b ENSGT00940000157291.h ENSGT00940000156762.d ENSGT00940000157291.g.a.a ENSGT00940000156762.c.a ENSGT00990000203803.b ENSGT00940000155107.a.a.a.c ENSGT00940000159465.g.a ENSGT00940000158915.e ENSGT00940000155536.u ENSGT00950000182996.b.a.a.b.d.b.a.a.a.a ENSGT00940000155839.i #22 ENSGT00940000155610.o.a.c.a.b ENSGT00940000155610.o.a.c.b ENSGT00940000155377 ENSGT00940000156143.a.a.g ENSGT00390000002563.a.d #20 ENSGT00390000002563.b.a.a.b #19 ENSGT01000000214440.A.a.b.a.g.b.b.a ENSGT00940000154798.a.d.a.c #17 ENSGT00390000004766.e.a #16 ENSGT00390000003312.c ENSGT00940000165224.a.b.a ENSGT00940000153979.B.a ENSGT00390000012959.b.g ENSGT00940000156485.l ENSGT00390000000803.e Common carp reference MODERN SPECIES 47 ENSCCRG00000071762 ENSCCRG00000082162 mtf1 (ENSCCRG00000065815) ENSCCRG00000042848 ENSCCRG00000042797 ZC3H12A (ENSCCRG00000009612) ENSCCRG00000059600 ENSCCRG00000060213 ENSCCRG00000052614 ENSCCRG00000056036 ENSCCRG00000067229 csf3r (ENSCCRG00000005482) cyb5r4 (ENSCCRG00000005474) ENSCCRG00000018154 ENSCCRG00000059060 HACE1 (ENSCCRG00000018174) #22 GRIK2 (ENSCCRG00000078513) ENSCCRG00000079992 ENSCCRG00000019548 sim1a (ENSCCRG00000027612) ENSCCRG00000008088 bves (ENSCCRG00000009914) #20 popdc3 (ENSCCRG00000061280) #19 ENSCCRG00000025465 prdm1a (ENSCCRG00000058299) #17 atg5 (ENSCCRG00000040266) #16 med18 (ENSCCRG00000040366) ENSCCRG00000040371 sri (ENSCCRG00000069496) nt5c3a (ENSCCRG00000006337) bmper (ENSCCRG00000006275) Golden-line barbel MODERN SPECIES 257 cdcp1a (ENSSGRG00000023307) ENSSGRG00000023306 ENSSGRG00000023300 ENSSGRG00000023298 smpdl3b (ENSSGRG00000023294) mecr (ENSSGRG00000023292) LIN28A (ENSSGRG00000023280) ##21 yrdc (ENSSGRG00000023276) mtf1 (ENSSGRG00000023263) ENSSGRG00000023261 ENSSGRG00000023253 GRIK3 (ENSSGRG00000023233) ENSSGRG00000023230 csf3r (ENSSGRG00000023226) cyb5r4 (ENSSGRG00000023172) HACE1 (ENSSGRG00000023143) #22 Cyprininae ANCESTRAL SPECIES 1688 ENSGT01100000263475.f.a.e.a.a.a ENSGT00940000155839.j #22 Goldfish MODERN SPECIES 35 ndufa3 (ENSCARG00000007956) tfpt (ENSCARG00000007947) mrpl51 (ENSCARG00000007942) arnt (ENSCARG00000007836) CERS2 (ENSCARG00000007817) CELF3 (ENSCARG00000007677) ADAMTSL4 (ENSCARG00000007115) GRIK3 (ENSCARG00000006597) ENSCARG00000006529 ENSCARG00000006519 ENSCARG00000006508 ENSCARG00000006495 ENSCARG00000006487 csf3r (ENSCARG00000006421) ENSCARG00000006407 HACE1 (ENSCARG00000006210) #22 ENSCARG00000006159 ENSCARG00000006154 ENSCARG00000006127 ENSCARG00000006094 ENSCARG00000006079 ENSCARG00000026268 ASCC3 (ENSCARG00000025580) sim1a (ENSCARG00000025500) STX12 (ENSCARG00000025493) prdm1a (ENSCARG00000025476) #17 atg5 (ENSCARG00000025405) #16 med18 (ENSCARG00000025385) ENSCARG00000025378 sri (ENSCARG00000025361) nt5c3a (ENSCARG00000025336) Cyprininae_a ANCESTRAL SPECIES 1264 ENSGT01100000263475.f.a.e.a.a.a ENSGT00940000155839.j #22 Common carp reference MODERN SPECIES 2 ENSCCRG00000034002 ##21 ENSCCRG00000077100 yrdc (ENSCCRG00000067697) mtf1 (ENSCCRG00000065608) INPP5B (ENSCCRG00000044970) ENSCCRG00000026074 ZC3H12A (ENSCCRG00000051373) ENSCCRG00000054997 ENSCCRG00000066745 ENSCCRG00000003538 ENSCCRG00000035973 ENSCCRG00000080614 csf3r (ENSCCRG00000013947) ENSCCRG00000054332 ENSCCRG00000021695 ENSCCRG00000066209 #22 ENSCCRG00000072766 ENSCCRG00000071213 GRIK2 (ENSCCRG00000008375) ENSCCRG00000068516 ENSCCRG00000061187 sim1a (ENSCCRG00000026816) ENSCCRG00000056460 bves (ENSCCRG00000033770) #20 popdc3 (ENSCCRG00000076280) #19 ENSCCRG00000033774 ENSCCRG00000055780 prdm1a (ENSCCRG00000040232) #17 atg5 (ENSCCRG00000060205) #16 med18 (ENSCCRG00000029904) ENSCCRG00000015576 Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 1993 ENSSGRG00000018577 ENSSGRG00000018578 #22 HACE1 (ENSSGRG00000018580) #22 Golden-line barbel MODERN SPECIES 1993 ENSSGRG00000018577 ENSSGRG00000018578 #22 HACE1 (ENSSGRG00000018580) #22 Zebrafish MODERN SPECIES 7 cyb5r4 (ENSDARG00000020898) ENSDARG00000110954 lars2 (ENSDARG00000075337) cdcp1a (ENSDARG00000058943) CLEC3B (ENSDARG00000076541) FEZ2 (ENSDARG00000073784) acot22 (ENSDARG00000058945) tgfb2 (ENSDARG00000027087) lyplal1 (ENSDARG00000088764) preb (ENSDARG00000101602) ADCY3 (ENSDARG00000077145) WDR26 (ENSDARG00000062310) CNIH4 (ENSDARG00000087759) ENSDARG00000113659 ENSDARG00000051912 HACE1 (ENSDARG00000062280) #22 GRIK2 (ENSDARG00000113771) ASCC3 (ENSDARG00000086678) sim1a (ENSDARG00000023316) CERS2 (ENSDARG00000058992) CELF3 (ENSDARG00000006983) ENSDARG00000063407 ENSDARG00000075385 ENSDARG00000074676 ADAMTS16 (ENSDARG00000074646) irx1a (ENSDARG00000101831) irx2a (ENSDARG00000001785) irx4a (ENSDARG00000035648) ENSDARG00000115651 slc6a3 (ENSDARG00000004219) nrsn1 (ENSDARG00000111235) Euteleosteomorpha ANCESTRAL SPECIES 4 ENSGT00940000154641.A ENSGT00940000164813 ENSGT00940000165396.A.a ENSGT00940000160881 ENSGT00940000165579.a.a.b ENSGT00390000008744 ENSGT00550000074792.b ENSGT00940000160345 ENSGT01030000234567.A.a.a.a.a.b.e.a ENSGT00940000156240 ENSGT00940000166060 ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000177907 ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.i.a Protacanthopterygii ANCESTRAL SPECIES 91 ENSGT01060000248945 ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000153295.b #21 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000177907 ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.i.a ENSGT00940000159017.a.a ENSGT00940000157845.e ENSGT00500000044921.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 1085 ENSGT00390000002563.a.l #20 ENSGT00940000153295.b.i.b #21 ENSGT00940000155839.k #22 ENSGT00940000155610.o.b.n ENSGT00940000177907 Huchen MODERN SPECIES 334 kcnj21 (ENSHHUG00000033685) fbl (ENSHHUG00000033684) dyrk1b (ENSHHUG00000033670) zp3d.1 (ENSHHUG00000033657) ENSHHUG00000033644 ALDH2 (ENSHHUG00000032224) ENSHHUG00000032195 fzd6 (ENSHHUG00000032178) CTHRC1 (ENSHHUG00000032161) slc25a32b (ENSHHUG00000032129) ENSHHUG00000032111 ENSHHUG00000032104 popdc3 (ENSHHUG00000032054) #19 bves (ENSHHUG00000032031) #20 LIN28B (ENSHHUG00000032029) #21 HACE1 (ENSHHUG00000031981) #22 Salmoninae_a ANCESTRAL SPECIES 127 ENSGT00940000158485.b ENSGT00390000018094.r.a.a ENSGT00920000149145.t ENSGT00940000166060.j.b.a ENSGT00390000002563.a.l #20 ENSGT00940000153295.b.i.b #21 ENSGT00940000155839.k #22 ENSGT00940000155610.o.b.n ENSGT00940000177907 ENSGT00940000156143.a.a.a ENSGT00940000155536.kb.b ENSGT00650000093438.j.a.a ENSGT00390000009631 ENSGT00940000157432.B.f ENSGT01000000214440.A.a.a.d ENSGT00940000164984.e.b ENSGT00940000157640.d.b ENSGT00940000159017.a.a ENSGT00940000157845.e.a.d ENSGT00940000157845.e.b ENSGT01000000214993.b.a.a ENSGT00500000044921.b.i Salmo ANCESTRAL SPECIES 57 ENSGT00390000008744.c ENSGT01080000257365.b.a.b.a.a.c.b ENSGT00550000074792.b.g ENSGT00940000160345.d ENSGT01030000234567.A.a.a.a.a.b.e.a.a ENSGT00940000156136.cb.c.b ENSGT00940000156240.t.b.a ENSGT00940000158485.b ENSGT00390000018094.q ENSGT00390000018094.r.a.a ENSGT00920000149145.t ENSGT00940000166060.j.b.a ENSGT01000000214440.A.a.b.a.g.b.b.d.a ENSGT00390000002563.a.l #20 ENSGT00940000153295.b.i.b #21 ENSGT00940000155839.k #22 ENSGT00940000155610.o.b.n ENSGT00940000177907 ENSGT00940000155610.o.b.m.b ENSGT00940000155377.r ENSGT00940000156143.a.a.a ENSGT00940000155536.kb.b ENSGT00650000093438.j.a.a ENSGT00390000009631 ENSGT00940000157432.B.f ENSGT01000000214440.A.a.a.d Atlantic salmon MODERN SPECIES 11 ppox (ENSSSAG00000045586) kcnj21 (ENSSSAG00000100372) fbrl (ENSSSAG00000045687) dyrk1b (ENSSSAG00000115527) zp3d.1 (ENSSSAG00000047190) ENSSSAG00000052799 ENSSSAG00000047314 ENSSSAG00000121272 FZD6 (ENSSSAG00000056654) ENSSSAG00000056660 SLC25A32 (ENSSSAG00000056669) ENSSSAG00000098988 ENSSSAG00000056707 BVES (ENSSSAG00000056721) #20 LIN28B (ENSSSAG00000056739) #21 HACE1 (ENSSSAG00000056790) #22 GRIK2 (ENSSSAG00000052059) ENSSSAG00000113822 ENSSSAG00000104950 ASCC3 (ENSSSAG00000055471) sim1a (ENSSSAG00000055314) ENSSSAG00000055271 ENSSSAG00000103286 cep162 (ENSSSAG00000055206) ENSSSAG00000055096 ENSSSAG00000090447 ENSSSAG00000055062 ENSSSAG00000055046 cdk14 (ENSSSAG00000063194) fzd1 (ENSSSAG00000121276) znrf2b (ENSSSAG00000053869) River trout MODERN SPECIES 30 ENSSTUG00000019124 ppox (ENSSTUG00000019140) kcnj21 (ENSSTUG00000019265) fbl (ENSSTUG00000019276) dyrk1b (ENSSTUG00000019285) ENSSTUG00000019348 ALDH2 (ENSSTUG00000019523) ENSSTUG00000023442 fzd6 (ENSSTUG00000023459) CTHRC1 (ENSSTUG00000023477) slc25a32b (ENSSTUG00000023504) ENSSTUG00000023538 ENSSTUG00000023561 bves (ENSSTUG00000023590) #20 LIN28B (ENSSTUG00000023618) #21 HACE1 (ENSSTUG00000023682) #22 ENSSTUG00000024672 GRIK2 (ENSSTUG00000024679) ASCC3 (ENSSTUG00000024791) ENSSTUG00000025259 ENSSTUG00000025262 sim1a (ENSSTUG00000025276) cyb5r4 (ENSSTUG00000025310) mrap2a (ENSSTUG00000025335) cep162 (ENSSTUG00000025349) ENSSTUG00000025424 ENSSTUG00000025457 ENSSTUG00000025474 ENSSTUG00000025476 ENSSTUG00000025481 cdk14 (ENSSTUG00000025514) Oncorhynchus ANCESTRAL SPECIES 155 ENSGT00390000002563.a.l #20 ENSGT00940000153295.b.i.b #21 ENSGT00940000155839.k #22 ENSGT00940000155610.o.b.m.a.a ENSGT00940000176293 ENSGT00940000155377.t ENSGT00940000156143.a.a.a ENSGT00940000155536.kb.b ENSGT00650000093438.j.a.a ENSGT00390000009631 ENSGT00940000157432.B.f ENSGT01000000214440.A.a.a.d Rainbow trout MODERN SPECIES 21 ENSOMYG00000072265 dyrk1b (ENSOMYG00000001543) zp3d.1 (ENSOMYG00000001504) ENSOMYG00000049210 ENSOMYG00000001090 ENSOMYG00000000697 FZD6 (ENSOMYG00000000684) ENSOMYG00000000674 SLC25A32 (ENSOMYG00000000638) ENSOMYG00000000621 ENSOMYG00000000610 ENSOMYG00000062268 BVES (ENSOMYG00000000574) #20 LIN28B (ENSOMYG00000000542) #21 ENSOMYG00000055662 HACE1 (ENSOMYG00000000513) #22 GRIK2 (ENSOMYG00000000381) ENSOMYG00000000282 ENSOMYG00000000271 sim1a (ENSOMYG00000000263) ENSOMYG00000000153 mrap2a (ENSOMYG00000000063) cep162 (ENSOMYG00000038682) ENSOMYG00000038550 ENSOMYG00000073288 ENSOMYG00000038377 PTTG (ENSOMYG00000038352) cdk14 (ENSOMYG00000038342) ENSOMYG00000059215 ENSOMYG00000070766 fzd1 (ENSOMYG00000038333) Oncorhynchus_a ANCESTRAL SPECIES 218 ENSGT00940000156139.d ENSGT01000000214440.A.a.b.a.g.b.b.c.a.a ENSGT00390000002563.a.l #20 ENSGT00940000153295.b.i.b #21 ENSGT00940000155839.k #22 ENSGT00940000155610.o.b.m.a.a ENSGT00940000156143.a.a.a ENSGT00940000155536.kb.b ENSGT00650000093438.j.a.a ENSGT00390000009631 ENSGT00940000157432.B.f Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 22 kcnj21 (ENSOTSG00005026798) fbl (ENSOTSG00005026801) dyrk1b (ENSOTSG00005026803) zp3d.1 (ENSOTSG00005026804) ENSOTSG00005026805 ENSOTSG00005026817 ENSOTSG00005033550 fzd6 (ENSOTSG00005033562) CTHRC1 (ENSOTSG00005033563) slc25a32b (ENSOTSG00005033564) ENSOTSG00005033566 ENSOTSG00005033567 popdc3 (ENSOTSG00005033569) #19 bves (ENSOTSG00005033573) #20 LIN28B (ENSOTSG00005033574) #21 HACE1 (ENSOTSG00005033587) #22 zfpm2a (ENSOTSG00005037092) ENSOTSG00005037093 OXR1 (ENSOTSG00005037098) sqlea (ENSOTSG00005037242) rnf144b (ENSOTSG00005037811) ENSOTSG00005037812 ENSOTSG00005037815 atp6v1c1a (ENSOTSG00005037816) AZIN1 (ENSOTSG00005037984) KLF10 (ENSOTSG00005037987) ubr5 (ENSOTSG00005038160) ENSOTSG00005041521 LAPTM4B (ENSOTSG00005041527) ENSOTSG00005041536 RNF146 (ENSOTSG00005041537) Chinook salmon MODERN SPECIES 3 ppox (ENSOTSG00005032715) kcnj21 (ENSOTSG00005032872) fbl (ENSOTSG00005032874) dyrk1b (ENSOTSG00005032878) zp3d.1 (ENSOTSG00005032880) ENSOTSG00005032883 ALDH2 (ENSOTSG00005032898) ENSOTSG00005035327 fzd6 (ENSOTSG00005035329) CTHRC1 (ENSOTSG00005035331) slc25a32b (ENSOTSG00005035334) ENSOTSG00005035335 ENSOTSG00005035336 bves (ENSOTSG00005035337) #20 ENSOTSG00005035340 #21 HACE1 (ENSOTSG00005035347) #22 ENSOTSG00005036761 ENSOTSG00005036762 cemip2 (ENSOTSG00005036765) abhd17b (ENSOTSG00005037076) zgc:101016 (ENSOTSG00005037077) gda (ENSOTSG00005037078) si:ch211-214j8.12 (ENSOTSG00005037293) zfand5a (ENSOTSG00005037294) TMC1 (ENSOTSG00005037295) tmc2b (ENSOTSG00005037296) ALDH1A1 (ENSOTSG00005037297) ENSOTSG00005037304 anxa1a (ENSOTSG00005037311) anxa1a (ENSOTSG00005037341) MFSD3 (ENSOTSG00005037457) Coho salmon MODERN SPECIES 11 kcnj21 (ENSOKIG00005001121) fbl (ENSOKIG00005001126) dyrk1b (ENSOKIG00005001140) zp3d.1 (ENSOKIG00005001158) ENSOKIG00005001164 ENSOKIG00005001314 ENSOKIG00005001984 ENSOKIG00005001993 FZD6 (ENSOKIG00005002008) CTHRC1 (ENSOKIG00005002022) slc25a32b (ENSOKIG00005002044) TRNAU1AP (ENSOKIG00005002072) STX12 (ENSOKIG00005002087) BVES (ENSOKIG00005002120) #20 LIN28B (ENSOKIG00005002173) #21 HACE1 (ENSOKIG00005002258) #22 GRIK2 (ENSOKIG00005002475) ADGRB1 (ENSOKIG00005002689) ENSOKIG00005002703 cep162 (ENSOKIG00005002715) mrap2a (ENSOKIG00005002743) cyb5r4 (ENSOKIG00005002753) ENSOKIG00005002768 ENSOKIG00005002777 ENSOKIG00005002783 ENSOKIG00005002793 cdk14 (ENSOKIG00005002841) fzd1 (ENSOKIG00005003190) ZNRF2 (ENSOKIG00005003198) NOD1 (ENSOKIG00005003244) ENSOKIG00005003406 Salmoninae ANCESTRAL SPECIES 98 ENSGT00940000156136.bb.a.a ENSGT00940000156240.t.a.a.a ENSGT00390000012014.A ENSGT00940000158485.a ENSGT00940000158485.b ENSGT00390000018094 ENSGT00920000149145.s ENSGT00940000166060.j.b.b ENSGT01000000214440.A.a.b.a.g.b.b.c.a.b ENSGT00920000149145.t ENSGT00940000156139.d ENSGT01000000214440.A.a.b.a.g.b.b.c.a.a ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a.k #20 ENSGT00940000153295.b.i.a #21 ENSGT00940000155839.l #22 ENSGT00940000155610.o.b.m.a ENSGT00940000155610.o.b.m.b ENSGT00940000155377 ENSGT00940000156143.a.a.b ENSGT00940000156143.a.a.a ENSGT00940000155536 ENSGT00650000093438.j ENSGT00390000009631 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984.f ENSGT00940000157640.c ENSGT00940000162584.i.a.a ENSGT00940000162584.i.a.b ENSGT00940000159017.a.a Salmoninae_a ANCESTRAL SPECIES 61 ENSGT01030000234567.A.a.a.a.a.b.e.a.a ENSGT01030000234567.A.a.a.a.a.b.e.a.b ENSGT00940000156136.bb.a.a ENSGT00940000156240.t.a.a.a ENSGT00390000012014.A ENSGT00940000158485.a ENSGT00390000018094.r.a.b ENSGT00920000149145.s ENSGT00940000166060.j.b.b ENSGT01000000214440.A.a.b.a.g.b.b.d ENSGT00940000156139.d ENSGT01000000214440.A.a.b.a.g.b.b.c.a.a ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a.k #20 ENSGT00940000153295.b.i.a #21 ENSGT00940000155839.l #22 ENSGT00940000155610.o.b.m.a ENSGT00940000155377 ENSGT00940000156143.a.a.b ENSGT00940000155536.kb.a ENSGT00650000093438.i ENSGT00650000093438.j.b ENSGT00940000170371 ENSGT00940000157432.B.e ENSGT01000000214440.A.a.a.c ENSGT00940000164984.f ENSGT00940000157640.c.a ENSGT00940000162584.i.a.a Oncorhynchus ANCESTRAL SPECIES 3 ENSGT00940000156136.bb.a.a ENSGT00940000156240.t.a.a.a ENSGT00940000156136.bb.a.b ENSGT00940000156240.t.a.a.b ENSGT00390000012014.A.a ENSGT00940000158485.a ENSGT00390000018094.r.a.b ENSGT00920000149145.s ENSGT00940000166060.j.b.b ENSGT01000000214440.A.a.b.a.g.b.b.c.b ENSGT00940000156139.d ENSGT01000000214440.A.a.b.a.g.b.b.c.a.a ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a.k #20 ENSGT00940000153295.b.i.a #21 ENSGT00940000155839.l #22 ENSGT00940000155610.o.b.m.a.b ENSGT00940000155377.s ENSGT00940000156143.a.a.b ENSGT00940000155536.jb ENSGT00650000093438.j.a.b ENSGT00940000157432.B.e.a ENSGT01000000214440.A.a.a.c ENSGT00940000164984.f ENSGT00940000157640.c.a ENSGT00940000162584.i.a.a ENSGT00940000157640.c.b ENSGT00940000162584.i.a.b ENSGT00940000159017.a.a ENSGT00940000157845.e.a.c ENSGT00940000157845.e.b Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 11 upk1a (ENSOMYG00000027230) ppox (ENSOMYG00000027271) kcnj21 (ENSOMYG00000027354) fbl (ENSOMYG00000027365) dyrk1b (ENSOMYG00000027387) ENSOMYG00000027513 ENSOMYG00000028110 ENSOMYG00000029078 FZD6 (ENSOMYG00000029092) ENSOMYG00000029124 SLC25A32 (ENSOMYG00000029141) ENSOMYG00000029178 ENSOMYG00000027428 BVES (ENSOMYG00000029213) #20 LIN28B (ENSOMYG00000029261) #21 ENSOMYG00000029286 #22 HACE1 (ENSOMYG00000029379) #22 GRIK2 (ENSOMYG00000027398) ASCC3 (ENSOMYG00000029552) ENSOMYG00000029709 ENSOMYG00000029717 ENSOMYG00000073873 mrap2a (ENSOMYG00000000078) ENSOMYG00000064731 ENSOMYG00000000311 ENSOMYG00000000377 ENSOMYG00000049652 PTTG (ENSOMYG00000000395) cdk14 (ENSOMYG00000000478) ENSOMYG00000066480 fzd1 (ENSOMYG00000000499) Rainbow trout MODERN SPECIES 11 ppox (ENSOMYG00000027271) kcnj21 (ENSOMYG00000027354) fbl (ENSOMYG00000027365) dyrk1b (ENSOMYG00000027387) ENSOMYG00000027513 ENSOMYG00000028110 ENSOMYG00000029078 FZD6 (ENSOMYG00000029092) ENSOMYG00000029124 SLC25A32 (ENSOMYG00000029141) ENSOMYG00000029178 ENSOMYG00000027428 BVES (ENSOMYG00000029213) #20 LIN28B (ENSOMYG00000029261) #21 ENSOMYG00000029286 #22 HACE1 (ENSOMYG00000029379) #22 GRIK2 (ENSOMYG00000027398) ASCC3 (ENSOMYG00000029552) ENSOMYG00000029709 ENSOMYG00000029717 ENSOMYG00000073873 mrap2a (ENSOMYG00000000078) ENSOMYG00000064731 ENSOMYG00000000311 ENSOMYG00000000377 ENSOMYG00000049652 PTTG (ENSOMYG00000000395) cdk14 (ENSOMYG00000000478) ENSOMYG00000066480 fzd1 (ENSOMYG00000000499) znrf2b (ENSOMYG00000000514) Oncorhynchus_a ANCESTRAL SPECIES 26 ENSGT00390000012014.A.b ENSGT00940000158485.b ENSGT00390000018094.r.a.a ENSGT00920000149145.t ENSGT00940000166060.j.b.a ENSGT00940000156240.t.a.a.b ENSGT00390000012014.A.a ENSGT00940000158485.a ENSGT00390000018094.r.a.b ENSGT00920000149145.s ENSGT00940000166060.j.b.b ENSGT01000000214440.A.a.b.a.g.b.b.c.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a.k #20 ENSGT00940000153295.b.i.a #21 ENSGT00940000155839.l #22 ENSGT00940000155610.o.b.m.a.b ENSGT00940000155377.s ENSGT00940000156143.a.a.b ENSGT00940000155536.jb ENSGT00940000157432.B.e.a ENSGT01000000214440.A.a.a.c ENSGT00940000164984.f ENSGT00940000157640.c.a ENSGT00940000162584.i.a.a ENSGT00940000155536.kb.a ENSGT00650000093438.i ENSGT00940000157432.B.e.b ENSGT00940000164984.e.b ENSGT00940000157640.d.b ENSGT00940000159017.a.a Coho salmon MODERN SPECIES 4 ppox (ENSOKIG00005023040) kcnj21 (ENSOKIG00005023021) fbl (ENSOKIG00005022989) dyrk1b (ENSOKIG00005022945) zp3d.1 (ENSOKIG00005022903) ENSOKIG00005022893 ALDH2 (ENSOKIG00005020518) ENSOKIG00005020420 fzd6 (ENSOKIG00005020404) CTHRC1 (ENSOKIG00005020377) SLC25A32 (ENSOKIG00005020355) ENSOKIG00005020328 ENSOKIG00005020300 bves (ENSOKIG00005020278) #20 LIN28B (ENSOKIG00005020274) #21 ENSOKIG00005020260 #22 ENSOKIG00005020252 GRIK2 (ENSOKIG00005016884) ASCC3 (ENSOKIG00005014846) sim1a (ENSOKIG00005014680) ENSOKIG00005014670 ENSOKIG00005014666 mrap2a (ENSOKIG00005014658) ADGRB1 (ENSOKIG00005014157) ENSOKIG00005014093 ENSOKIG00005014083 ENSOKIG00005014063 cdk14 (ENSOKIG00005013886) fzd1 (ENSOKIG00005013843) ENSOKIG00005013837 znrf2b (ENSOKIG00005013826) Chinook salmon MODERN SPECIES 2906 ppox (ENSOTSG00005045165) kcnj21 (ENSOTSG00005045164) fbl (ENSOTSG00005045162) dyrk1b (ENSOTSG00005045159) ENSOTSG00005045157 ENSOTSG00005041208 ENSOTSG00005041193 fzd6 (ENSOTSG00005041192) CTHRC1 (ENSOTSG00005041190) slc25a32b (ENSOTSG00005041188) ENSOTSG00005041187 ENSOTSG00005041186 popdc3 (ENSOTSG00005041183) #19 bves (ENSOTSG00005041182) #20 LIN28B (ENSOTSG00005041178) #21 HACE1 (ENSOTSG00005041177) #22 Salmo ANCESTRAL SPECIES 66 ENSGT01080000257365.b.a.b.a.a.c.a ENSGT00550000074792.b.h ENSGT00940000160345.c ENSGT01030000234567.A.a.a.a.a.b.e.a.b ENSGT00940000156136.cb.c.a ENSGT00940000156240.t.a.b ENSGT00390000012014.A ENSGT00940000158485.a ENSGT00390000018094.r.a.b ENSGT00920000149145.s ENSGT00940000166060.j.b.b ENSGT01000000214440.A.a.b.a.g.b.b.d.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a.k #20 ENSGT00940000153295.b.i.a #21 ENSGT00940000155839.l #22 ENSGT00940000155610.o.b.m.a ENSGT00940000155377.q ENSGT00940000156143.a.a.b ENSGT00940000155536.kb.a ENSGT00650000093438.j.b ENSGT00940000170371 ENSGT00940000157432.B.e ENSGT01000000214440.A.a.a.c ENSGT00940000164984.f ENSGT00940000157640.c.a ENSGT00940000162584.i.a.a ENSGT00940000164984.e.a.a ENSGT00940000157640.c.b ENSGT00940000162584.i.a.b ENSGT00940000159017.a.a River trout MODERN SPECIES 22 ppox (ENSSTUG00000008186) kcnj21 (ENSSTUG00000008166) fbl (ENSSTUG00000008149) dyrk1b (ENSSTUG00000008050) zp3d.1 (ENSSTUG00000008037) ENSSTUG00000008026 ENSSTUG00000005531 ENSSTUG00000005414 fzd6 (ENSSTUG00000005402) CTHRC1 (ENSSTUG00000005366) slc25a32b (ENSSTUG00000005342) ENSSTUG00000005312 ENSSTUG00000005295 bves (ENSSTUG00000005270) #20 LIN28B (ENSSTUG00000005121) #21 HACE1 (ENSSTUG00000004991) #22 GRIK2 (ENSSTUG00000004858) ASCC3 (ENSSTUG00000002636) sim1a (ENSSTUG00000000857) cyb5r4 (ENSSTUG00000000137) mrap2a (ENSSTUG00000000071) ENSSTUG00000030092 ENSSTUG00000030075 ADGRB1 (ENSSTUG00000029658) ENSSTUG00000029628 ENSSTUG00000029597 cdk14 (ENSSTUG00000029276) fzd1 (ENSSTUG00000029242) ENSSTUG00000029205 NOD1 (ENSSTUG00000028440) ENSSTUG00000028388 Huchen MODERN SPECIES 661 ENSHHUG00000012051 dyrk1b (ENSHHUG00000012045) zp3d.1 (ENSHHUG00000012034) ENSHHUG00000012026 ENSHHUG00000011117 ENSHHUG00000011091 fzd6 (ENSHHUG00000011081) CTHRC1 (ENSHHUG00000011073) slc25a32b (ENSHHUG00000011056) ENSHHUG00000011032 ENSHHUG00000011013 popdc3 (ENSHHUG00000011008) #19 bves (ENSHHUG00000010955) #20 ENSHHUG00000010945 LIN28B (ENSHHUG00000010940) #21 HACE1 (ENSHHUG00000010905) #22 Northern pike MODERN SPECIES 19 ENSELUG00000022393 rbm42 (ENSELUG00000022403) ENSELUG00000022419 ENSELUG00000022443 ppox (ENSELUG00000022493) fbl (ENSELUG00000022537) dyrk1b (ENSELUG00000022570) zp3d.1 (ENSELUG00000022593) aldh2.2 (ENSELUG00000022625) ENSELUG00000022649 fzd6 (ENSELUG00000022683) slc25a32b (ENSELUG00000022726) TRNAU1AP (ENSELUG00000022790) popdc3 (ENSELUG00000022801) #19 bves (ENSELUG00000022808) #20 HACE1 (ENSELUG00000023064) #22 ENSELUG00000023111 GRIK2 (ENSELUG00000023159) ASCC3 (ENSELUG00000023441) sim1a (ENSELUG00000023506) cyb5r4 (ENSELUG00000023618) cep162 (ENSELUG00000023639) ADGRB1 (ENSELUG00000024093) pttg (ENSELUG00000024157) cdk14 (ENSELUG00000001014) fzd1 (ENSELUG00000024188) NOD1 (ENSELUG00000024213) ggctb (ENSELUG00000024232) SLC6A20 (ENSELUG00000024263) sacm1lb (ENSELUG00000001025) LIMD1 (ENSELUG00000024425) Acanthomorphata ANCESTRAL SPECIES 145 ENSGT00940000166924 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00940000157284.cb.a ENSGT00390000008751.a.fb ENSGT00390000001960 ENSGT00940000157390 ENSGT00940000159171 ENSGT00390000018031 ENSGT00940000156549.a.a ENSGT00940000153634.b.a ENSGT00950000182834.B ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b Cod MODERN SPECIES 2 kpna5 (ENSGMOG00000007147) gprc6a (ENSGMOG00000007217) ENSGMOG00000023864 ENSGMOG00000017396 RRP15 (ENSGMOG00000017385) tgfb2 (ENSGMOG00000017371) ENSGMOG00000024728 lyplal1 (ENSGMOG00000014091) preb (ENSGMOG00000014062) ENSGMOG00000014013 ENSGMOG00000013975 ENSGMOG00000013962 ENSGMOG00000028963 POPDC3 (ENSGMOG00000005372) #19 bves (ENSGMOG00000005672) #20 HACE1 (ENSGMOG00000005638) #22 GRIK2 (ENSGMOG00000010713) ASCC3 (ENSGMOG00000018158) sim1a (ENSGMOG00000018211) ENSGMOG00000016517 ENSGMOG00000025544 cep162 (ENSGMOG00000036123) ENSGMOG00000001859 ENSGMOG00000002279 ENSGMOG00000033342 ENSGMOG00000006070 fzd1 (ENSGMOG00000032081) ENSGMOG00000014696 ENSGMOG00000032543 ENSGMOG00000013883 ENSGMOG00000013835 Euacanthomorphacea ANCESTRAL SPECIES 28 ENSGT00940000166924 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00940000157284.cb.a ENSGT00390000008751.a.fb ENSGT00390000001960 ENSGT00940000157390 ENSGT00940000159171 ENSGT00390000018031 ENSGT00940000156549.a.a ENSGT00940000153634.b.a ENSGT00950000182834.B ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b Pinecone sodierfish MODERN SPECIES 7 zufsp (ENSMMDG00005022718) kpna5 (ENSMMDG00005022453) gprc6a (ENSMMDG00005022445) vegfaa (ENSMMDG00005022443) NAGA (ENSMMDG00005022442) rrp15 (ENSMMDG00005022441) tgfb2 (ENSMMDG00005022439) lyplal1 (ENSMMDG00005022437) preb (ENSMMDG00005022435) ADCY3 (ENSMMDG00005022046) WDR26 (ENSMMDG00005021567) CNIH4 (ENSMMDG00005021551) ENSMMDG00005021548 popdc3 (ENSMMDG00005021546) #19 bves (ENSMMDG00005021544) #20 HACE1 (ENSMMDG00005020539) #22 GRIK2 (ENSMMDG00005020484) ASCC3 (ENSMMDG00005020342) sim1a (ENSMMDG00005020330) ENSMMDG00005020328 mrap2a (ENSMMDG00005020326) cep162 (ENSMMDG00005020320) si:ch211-198c19.1 (ENSMMDG00005020317) ADGRB1 (ENSMMDG00005020296) ENSMMDG00005020284 ENSMMDG00005020279 ggctb (ENSMMDG00005020273) ENSMMDG00005020270 SLC6A20 (ENSMMDG00005020259) sacm1lb (ENSMMDG00005019468) fbl (ENSMMDG00005019453) Percomorphaceae ANCESTRAL SPECIES ENSGT00940000166924 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00940000159171 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000008751.a.fb ENSGT00940000157284.cb.a ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B Tiger tail seahorse MODERN SPECIES 288 calhm5.1 (ENSHCOG00000021192) rwdd1 (ENSHCOG00000021189) zufsp (ENSHCOG00000021187) kpna5 (ENSHCOG00000021185) gprc6a (ENSHCOG00000021184) CNIH4 (ENSHCOG00000021182) WDR26 (ENSHCOG00000021180) ADCY3 (ENSHCOG00000021175) preb (ENSHCOG00000021172) lyplal1 (ENSHCOG00000021169) tgfb2 (ENSHCOG00000021165) rrp15 (ENSHCOG00000021163) vegfaa (ENSHCOG00000021159) popdc3 (ENSHCOG00000021156) #19 bves (ENSHCOG00000021154) #20 HACE1 (ENSHCOG00000021151) #22 GRIK2 (ENSHCOG00000021146) ASCC3 (ENSHCOG00000021142) sim1a (ENSHCOG00000021137) cyb5r4 (ENSHCOG00000021131) cep162 (ENSHCOG00000021128) ENSHCOG00000021125 ADGRB1 (ENSHCOG00000021123) enpp2 (ENSHCOG00000021118) taf2 (ENSHCOG00000021114) cndp1 (ENSHCOG00000021112) GRB10 (ENSHCOG00000021109) cobl (ENSHCOG00000021103) CX3CR1 (ENSHCOG00000021098) ENSHCOG00000021096 CCR8 (ENSHCOG00000021093) Percomorphaceae_B ANCESTRAL SPECIES 1 ENSGT00940000166924 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00940000159171 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000008751.a.fb ENSGT00940000157284.cb.a ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B Ovalentaria ANCESTRAL SPECIES 3 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01030000234973 ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B Atherinomorphae ANCESTRAL SPECIES ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01030000234973.a ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B Cyprinodontiformes ANCESTRAL SPECIES ENSGT01030000234610.a.a ENSGT00390000001827 ENSGT00390000012832 ENSGT00500000044921.b ENSGT00940000155873 ENSGT00940000155579.a ENSGT00550000074792.b ENSGT00940000160345 ENSGT00390000008744 ENSGT00940000164813 ENSGT00940000156240 ENSGT01030000234567.A.a.a.a.a.b.e.a ENSGT00940000156479.a ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01030000234973.a ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B Aplocheiloidei ANCESTRAL SPECIES 214 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000002563.a #20 ENSGT00390000002563.b.a.a #19 ENSGT00940000156479.a ENSGT00390000009631 ENSGT01030000234567.A.a.a.a.a.b.e.a ENSGT00940000156240 Turquoise killifish MODERN SPECIES 1614 ENSNFUG00015004466 SCXA (ENSNFUG00015004476) ENSNFUG00015004480 gapdhs (ENSNFUG00015004492) ENSNFUG00015004522 tmem147 (ENSNFUG00015004536) SULT2ST3 (ENSNFUG00015004557) CABZ01054933.1 (ENSNFUG00015004580) ENSNFUG00015000070 NCDN (ENSNFUG00015000082) SLC6A20 (ENSNFUG00015000145) Nfu_g_1_016842 (ENSNFUG00015000182) #20 ENSNFUG00015000200 popdc3 (ENSNFUG00015000217) #19 ENSNFUG00015000232 HACE1 (ENSNFUG00015000286) #22 ENSNFUG00015000337 ENSNFUG00015000345 ENSNFUG00015000349 GRIK2 (ENSNFUG00015000764) ASCC3 (ENSNFUG00015002007) ENSNFUG00015002948 ENSNFUG00015002949 sim1a (ENSNFUG00015002959) cyb5r4 (ENSNFUG00015002981) KIAA1009 (ENSNFUG00015002985) ENSNFUG00015002999 ALDH2 (ENSNFUG00015003353) FBL (ENSNFUG00015004300) dyrk1b (ENSNFUG00015004322) TCAIM (ENSNFUG00015004360) Mangrove rivulus MODERN SPECIES 685 HACE1 (ENSKMAG00000000959) #22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00390000001827 ENSGT00390000012832 ENSGT00500000044921.b ENSGT00940000155873 ENSGT00940000155579.a ENSGT00550000074792.b ENSGT00940000160345 ENSGT00390000008744 ENSGT00940000164813 ENSGT00940000156240 ENSGT01030000234567.A.a.a.a.a.b.e.a ENSGT00940000156479.a ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01030000234973.a ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B Poeciliinae ANCESTRAL SPECIES 22 ENSGT01030000234610.a.b ENSGT00390000001827 ENSGT00390000012832 ENSGT00500000044921.b ENSGT00940000155873 ENSGT00940000155579.a ENSGT00550000074792.b ENSGT00940000160345 ENSGT00390000008744 ENSGT00940000164813 ENSGT01030000234567.A.a.a.a.a.b.e.a ENSGT00940000156240 ENSGT00940000156479.a ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01030000234973.a ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B Poecilia ANCESTRAL SPECIES 87 ENSGT01030000234610.a.b ENSGT00390000001827 ENSGT00390000012832 ENSGT00500000044921.b ENSGT00940000155873 ENSGT00940000155579.a ENSGT00550000074792.b ENSGT00940000160345 ENSGT00390000008744 ENSGT00940000164813 ENSGT01030000234567.A.a.a.a.a.b.e.a ENSGT00940000156240.w ENSGT00940000156479.a ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 NAME_6 ANCESTRAL SPECIES 428 ENSGT00940000164813 ENSGT01030000234567.A.a.a.a.a.b.e.a ENSGT00940000156240.w ENSGT00940000156479.a ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 Amazon molly MODERN SPECIES 752 rbm42 (ENSPFOG00000007701) ENSPFOG00000024792 ENSPFOG00000022685 aldh2.2 (ENSPFOG00000007403) DTNBP1 (ENSPFOG00000007188) popdc3 (ENSPFOG00000021796) #19 bves (ENSPFOG00000007053) #20 HACE1 (ENSPFOG00000006898) #22 ENSPFOG00000022593 ENSPFOG00000021941 zgc:86896 (ENSPFOG00000006806) ENSPFOG00000022364 trpm4a (ENSPFOG00000006621) Sailfin molly MODERN SPECIES 2984 HACE1 (ENSPLAG00000013490) #22 bves (ENSPLAG00000013530) #20 Guppy MODERN SPECIES 446 cnot10 (ENSPREG00000018348) TCAIM (ENSPREG00000018323) ggctb (ENSPREG00000018288) SLC6A20 (ENSPREG00000018263) ENSPREG00000018252 sacm1lb (ENSPREG00000018187) fbl (ENSPREG00000018169) dyrk1b (ENSPREG00000018152) ppox (ENSPREG00000018136) rbm42 (ENSPREG00000018102) ENSPREG00000018083 aldh2.2 (ENSPREG00000018040) ENSPREG00000018010 dtnbp1a (ENSPREG00000017991) popdc3 (ENSPREG00000017962) #19 HACE1 (ENSPREG00000017873) #22 ENSPREG00000017838 GRIK2 (ENSPREG00000017794) ENSPREG00000017694 ENSPREG00000017685 ASCC3 (ENSPREG00000017616) sim1a (ENSPREG00000017582) ENSPREG00000017560 cyb5r4 (ENSPREG00000017539) ENSPREG00000017511 clk2b (ENSPREG00000017497) setdb1b (ENSPREG00000017459) arnt (ENSPREG00000017435) CERS2 (ENSPREG00000017409) CELF3 (ENSPREG00000017378) ENSPREG00000017342 Platyfish MODERN SPECIES 17 ggctb (ENSXMAG00000025798) SLC6A20 (ENSXMAG00000025671) ENSXMAG00000023746 sacm1lb (ENSXMAG00000008541) fbl (ENSXMAG00000008522) dyrk1b (ENSXMAG00000003585) ppox (ENSXMAG00000026912) rbm42 (ENSXMAG00000012827) ENSXMAG00000025594 aldh2.2 (ENSXMAG00000024027) ENSXMAG00000025592 DTNBP1 (ENSXMAG00000015449) popdc3 (ENSXMAG00000025974) #19 bves (ENSXMAG00000021700) #20 ENSXMAG00000028072 HACE1 (ENSXMAG00000017328) #22 ENSXMAG00000022159 ENSXMAG00000029394 ENSXMAG00000026914 GRIK2 (ENSXMAG00000029901) ENSXMAG00000025643 ENSXMAG00000024182 ASCC3 (ENSXMAG00000000071) sim1a (ENSXMAG00000016785) cyb5r4 (ENSXMAG00000014504) cep162 (ENSXMAG00000029759) si:ch211-198c19.1 (ENSXMAG00000025826) ENSXMAG00000026221 ENSXMAG00000024242 ENSXMAG00000021828 ADGRB1 (ENSXMAG00000012791) NAME_4 ANCESTRAL SPECIES ENSGT00940000155839 #22 Mummichog MODERN SPECIES 1087 HACE1 (ENSFHEG00000001020) #22 Sheepshead minnow MODERN SPECIES 1297 HACE1 (ENSCVAG00000003973) #22 Oryzias ANCESTRAL SPECIES 90 ENSGT00940000160695 ENSGT00940000156240 ENSGT01030000234567.A.a.a.a.a.b.e.a ENSGT00390000009631 ENSGT01030000234610.a.b ENSGT01030000234610.a.a ENSGT00390000009168 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b Oryzias_b ANCESTRAL SPECIES 119 ENSGT00940000160695 ENSGT00940000156240 ENSGT01030000234567.A.a.a.a.a.b.e.a ENSGT00940000170371 ENSGT01030000234610.a.b ENSGT01030000234610.a.a ENSGT00390000009168 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b Indian medaka MODERN SPECIES 5 ENSOMEG00000010505 HIVEP3 (ENSOMEG00000010472) SERINC2 (ENSOMEG00000010404) ENSOMEG00000010361 ENSOMEG00000010342 ABHD5 (ENSOMEG00000010319) ENSOMEG00000010262 ENSOMEG00000010227 ENSOMEG00000010206 NOD1 (ENSOMEG00000010177) enpp2 (ENSOMEG00000010105) taf2 (ENSOMEG00000010038) ENSOMEG00000009987 ENSOMEG00000009978 bves (ENSOMEG00000009964) #20 HACE1 (ENSOMEG00000009921) #22 GRIK2 (ENSOMEG00000009820) ENSOMEG00000009682 GPM6A (ENSOMEG00000009652) acaa1 (ENSOMEG00000009632) btbd3a (ENSOMEG00000009611) strn (ENSOMEG00000009596) ENSOMEG00000009579 map1lc3c (ENSOMEG00000009556) cnrip1a (ENSOMEG00000009532) ENSOMEG00000009498 prokr1a (ENSOMEG00000009448) snrpb2 (ENSOMEG00000009435) ENSOMEG00000009408 ndufaf5 (ENSOMEG00000009351) esf1 (ENSOMEG00000009311) Javanese ricefish MODERN SPECIES 7 enpp2 (ENSOJAG00000022148) NOD1 (ENSOJAG00000022035) znrf2b (ENSOJAG00000022014) fzd1 (ENSOJAG00000022006) cdk14 (ENSOJAG00000021907) ENSOJAG00000021889 GADL1 (ENSOJAG00000021214) stt3b (ENSOJAG00000020719) zgc:77056 (ENSOJAG00000020684) ENSOJAG00000020676 aldh2.2 (ENSOJAG00000018138) pomgnt2 (ENSOJAG00000017910) rwdd1 (ENSOJAG00000017888) popdc3 (ENSOJAG00000017882) #19 bves (ENSOJAG00000017877) #20 HACE1 (ENSOJAG00000017784) #22 GRIK2 (ENSOJAG00000016049) ENSOJAG00000015967 c6 (ENSOJAG00000015592) c7b (ENSOJAG00000015355) ENSOJAG00000015333 rgs7bpb (ENSOJAG00000015317) Oryzias_a ANCESTRAL SPECIES 9 ENSGT00390000001296 ENSGT00940000155488.m.b ENSGT00940000158391.g.b.a ENSGT00940000155377 ENSGT00940000155536 ENSGT00950000182834.B ENSGT00940000160695 ENSGT00940000156240 ENSGT01030000234567.A.a.a.a.a.b.e.a ENSGT00390000009631 ENSGT01030000234610.a.b ENSGT01030000234610.a.a.ab.a ENSGT00390000009168 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00390000000420 ENSGT00940000155778.B ENSGT00940000157845 ENSGT00940000159017.a.a ENSGT00940000162584.j.a.a ENSGT00940000179051 ENSGT00940000162584.j.b ENSGT00940000157640 ENSGT01000000214440.A.a.a ENSGT00940000157432.B ENSGT00940000169325 ENSGT00940000156479.a ENSGT00940000165015 ENSGT00390000016277.a.k Japanese Medaka HdrR MODERN SPECIES 7 CNIH4 (ENSORLG00000004148) pomgnt2 (ENSORLG00000022061) aldh2.2 (ENSORLG00000004139) ENSORLG00000025975 cep162 (ENSORLG00000004117) calhm5.1 (ENSORLG00000024597) ENSORLG00000029065 ENSORLG00000026639 ENSORLG00000029639 ENSORLG00000023928 ENSORLG00000027934 calhm6 (ENSORLG00000022358) rwdd1 (ENSORLG00000020455) popdc3 (ENSORLG00000019669) #19 bves (ENSORLG00000026132) #20 HACE1 (ENSORLG00000004108) #22 ENSORLG00000029236 ENSORLG00000030346 GRIK2 (ENSORLG00000004024) ENSORLG00000023376 ENSORLG00000028765 taf2 (ENSORLG00000003911) ENSORLG00000003860 ENSORLG00000003852 NOD1 (ENSORLG00000003812) znrf2b (ENSORLG00000026834) fzd1 (ENSORLG00000025314) cdk14 (ENSORLG00000003794) ENSORLG00000027429 ENSORLG00000022682 ENSORLG00000027651 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 1138 HACE1 (ENSOSIG00000015581) #22 ENSOSIG00000015579 #22 GRIK2 (ENSOSIG00000015349) taf2 (ENSOSIG00000015174) enpp2 (ENSOSIG00000007217) NOD1 (ENSOSIG00000005089) ENSOSIG00000005074 fzd1 (ENSOSIG00000005072) cdk14 (ENSOSIG00000005071) ENSOSIG00000005070 ENSOSIG00000005064 ADGRB1 (ENSOSIG00000003981) si:ch211-198c19.1 (ENSOSIG00000003951) dtnbp1a (ENSOSIG00000003947) cndp1 (ENSOSIG00000003936) ABHD5 (ENSOSIG00000003920) snrka (ENSOSIG00000003911) Chinese medaka MODERN SPECIES 1138 ABHD5 (ENSOSIG00000003920) cndp1 (ENSOSIG00000003936) dtnbp1a (ENSOSIG00000003947) si:ch211-198c19.1 (ENSOSIG00000003951) ADGRB1 (ENSOSIG00000003981) ENSOSIG00000005064 ENSOSIG00000005070 cdk14 (ENSOSIG00000005071) fzd1 (ENSOSIG00000005072) ENSOSIG00000005074 NOD1 (ENSOSIG00000005089) enpp2 (ENSOSIG00000007217) taf2 (ENSOSIG00000015174) GRIK2 (ENSOSIG00000015349) ENSOSIG00000015579 #22 HACE1 (ENSOSIG00000015581) #22 Ovalentaria_B ANCESTRAL SPECIES 1 ENSGT00390000003114.e.b.b ENSGT00390000012832 ENSGT00390000001827 ENSGT01030000234610.a.a ENSGT01030000234610.a.b ENSGT00390000009168 ENSGT00940000156772.a ENSGT00940000166924 ENSGT01050000244950.a.a.b ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B ENSGT00390000000420 Pomacentridae ANCESTRAL SPECIES 174 ENSGT00390000012832 ENSGT00390000001827 ENSGT00390000009168 ENSGT01050000244950.a.a.b ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 Pomacentridae_A ANCESTRAL SPECIES 36 ENSGT00940000157640 ENSGT00940000164984 ENSGT01000000214440.A.a.a ENSGT00940000157432.B ENSGT00940000169325 ENSGT00390000012832 ENSGT00390000001827 ENSGT00390000009168 ENSGT01050000244950.a.a.b ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 Amphiprion ANCESTRAL SPECIES 165 ENSGT00940000164984 ENSGT01010000222920.d.a.b ENSGT01000000214440.A.a.a ENSGT00940000157432.B ENSGT00940000169325 ENSGT00390000012832 ENSGT00390000001827 ENSGT00390000009168 ENSGT01050000244950.a.a.b ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 Orange clownfish MODERN SPECIES 21 ENSAPEG00000005125 ENSAPEG00000005153 ADGRB1 (ENSAPEG00000005207) si:ch211-198c19.1 (ENSAPEG00000005342) TCAIM (ENSAPEG00000005373) cnot10 (ENSAPEG00000005389) rwdd1 (ENSAPEG00000005458) kpna5 (ENSAPEG00000005518) CNIH4 (ENSAPEG00000005610) WDR26 (ENSAPEG00000005638) ADCY3 (ENSAPEG00000005684) preb (ENSAPEG00000005750) kxd1 (ENSAPEG00000005763) popdc3 (ENSAPEG00000005802) #19 bves (ENSAPEG00000005821) #20 HACE1 (ENSAPEG00000005878) #22 GRIK2 (ENSAPEG00000006061) ENSAPEG00000006114 ENSAPEG00000006130 ASCC3 (ENSAPEG00000006181) ENSAPEG00000006304 ENSAPEG00000006313 sim1a (ENSAPEG00000006327) ENSAPEG00000006366 ENSAPEG00000006385 cyb5r4 (ENSAPEG00000006400) zgc:77056 (ENSAPEG00000006453) tmem42a (ENSAPEG00000006461) zdhhc3a (ENSAPEG00000006474) mc2r (ENSAPEG00000006499) mc5rb (ENSAPEG00000006527) Clown anemonefish MODERN SPECIES 1672 HACE1 (ENSAOCG00000000121) #22 ENSAOCG00000004005 Spiny chromis MODERN SPECIES 1556 popdc3 (ENSAPOG00000000258) #19 bves (ENSAPOG00000009179) #20 HACE1 (ENSAPOG00000009131) #22 ENSAPOG00000008925 ENSAPOG00000008903 abcg2b (ENSAPOG00000008880) hapstr1b (ENSAPOG00000008870) Bicolor damselfish MODERN SPECIES 971 preb (ENSSPAG00000021766) ENSSPAG00000021762 popdc3 (ENSSPAG00000021754) #19 ENSSPAG00000021749 bves (ENSSPAG00000021736) #20 HACE1 (ENSSPAG00000021697) #22 ENSSPAG00000021686 ENSSPAG00000021678 Cichlidae ANCESTRAL SPECIES 70 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00390000018031 ENSGT00940000156549.a.a ENSGT00940000153634.b.a ENSGT00950000182834.B ENSGT01050000244950.a.a.b ENSGT00940000166924 ENSGT00940000156772.a ENSGT00390000009168 ENSGT01030000234610.a.b ENSGT01030000234610.a.a ENSGT00390000001827 ENSGT00390000012832 ENSGT00390000003114.e.b.b ENSGT00940000157880.g.a ENSGT00500000044921.b Midas cichlid MODERN SPECIES 696 cyb5r4 (ENSACIG00000004720) cep162 (ENSACIG00000004812) popdc3 (ENSACIG00000004900) #19 bves (ENSACIG00000004915) #20 HACE1 (ENSACIG00000004930) #22 preb (ENSACIG00000004986) ADCY3 (ENSACIG00000005122) WDR26 (ENSACIG00000005170) CNIH4 (ENSACIG00000005207) calhm6 (ENSACIG00000005227) Pseudocrenilabrinae ANCESTRAL SPECIES 2 ENSGT00940000164813 ENSGT00390000008744 ENSGT00940000160345 ENSGT00550000074792.b ENSGT00940000177559 ENSGT00940000155579.a ENSGT00940000155873 ENSGT00500000044921.b ENSGT00390000003114.e.b.b ENSGT00390000012832 ENSGT01030000234610.a.b ENSGT01030000234610.a.a ENSGT00390000001827 ENSGT00390000002563.a #20 ENSGT00390000002563.b.a.a #19 ENSGT00940000155839 #22 ENSGT00390000018031 ENSGT00940000156549.a.a ENSGT00940000153634.b.a ENSGT00950000182834.B ENSGT01050000244950.a.a.b ENSGT00390000009168 ENSGT00390000001960 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 Nile tilapia MODERN SPECIES 2 rbm42 (ENSONIG00000008029) ppox (ENSONIG00000008031) dyrk1b (ENSONIG00000008036) fbl (ENSONIG00000008042) sacm1lb (ENSONIG00000008051) SLC6A20 (ENSONIG00000008058) ENSONIG00000031132 ggctb (ENSONIG00000035530) ENSONIG00000016501 TCAIM (ENSONIG00000016502) calhm5.1 (ENSONIG00000028258) calhm6 (ENSONIG00000034445) cnot10 (ENSONIG00000016505) bves (ENSONIG00000016509) #20 popdc3 (ENSONIG00000016510) #19 HACE1 (ENSONIG00000016512) #22 preb (ENSONIG00000016516) ENSONIG00000029075 ADCY3 (ENSONIG00000016520) WDR26 (ENSONIG00000016524) cnih4 (ENSONIG00000043072) kpna5 (ENSONIG00000016528) rwdd1 (ENSONIG00000016531) ENSONIG00000043179 rrp15 (ENSONIG00000028653) ENSONIG00000033942 GRIK2 (ENSONIG00000016534) ENSONIG00000032476 rps16 (ENSONIG00000028770) ENSONIG00000041281 ASCC3 (ENSONIG00000016540) Pseudocrenilabrinae_A ANCESTRAL SPECIES 57 ENSGT00940000164813 ENSGT00390000008744 ENSGT00940000160345 ENSGT00550000074792.b ENSGT00940000177559 ENSGT00940000155579.a ENSGT00940000155873 ENSGT00500000044921.b ENSGT00390000003114.e.b.b ENSGT00390000012832 ENSGT01030000234610.a.b ENSGT01030000234610.a.a ENSGT00390000001827 ENSGT00390000002563.a #20 ENSGT00390000002563.b.a.a #19 ENSGT00940000155839 #22 ENSGT00390000018031 ENSGT00940000156549.a.a ENSGT00940000153634.b.a ENSGT00950000182834.B ENSGT01050000244950.a.a.b ENSGT00390000009168 ENSGT00390000001960 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 Haplochromini ANCESTRAL SPECIES 65 ENSGT00940000156240 ENSGT00940000164813 ENSGT00390000008744 ENSGT00940000160345 ENSGT00550000074792.b ENSGT00940000155579.a ENSGT00940000155873 ENSGT00500000044921.b ENSGT00390000003114.e.b.b ENSGT00390000012832 ENSGT01030000234610.a.b ENSGT01030000234610.a.a ENSGT00390000001827 ENSGT00390000002563.a #20 ENSGT00390000002563.b.a.a #19 ENSGT00940000155839 #22 ENSGT00390000018031 ENSGT00940000179850 ENSGT00940000156549.a.a ENSGT00940000153634.b.a ENSGT00950000182834.B ENSGT01050000244950.a.a.b ENSGT00390000009168 ENSGT00390000001960 ENSGT00940000155610.o.b ENSGT00940000177907 ENSGT00940000155377 ENSGT00940000178556 ENSGT00940000170371 ENSGT00940000155536 Haplochromini_A ANCESTRAL SPECIES 69 ENSGT00940000156240 ENSGT00940000164813 ENSGT00390000008744 ENSGT00940000160345 ENSGT00550000074792.b ENSGT00940000155579.a ENSGT00940000155873 ENSGT00500000044921.b ENSGT00390000003114.e.b.b ENSGT00390000012832 ENSGT01030000234610.a.b ENSGT01030000234610.a.a ENSGT00390000001827 ENSGT00390000002563.a #20 ENSGT00390000002563.b.a.a #19 ENSGT00940000155839 #22 ENSGT00390000018031 ENSGT00940000179850 ENSGT00940000156549.a.a ENSGT00940000153634.b.a ENSGT00950000182834.B ENSGT01050000244950.a.a.b ENSGT00390000009168 ENSGT00390000001960 ENSGT00940000155610.o.b ENSGT00940000177907 ENSGT00940000155377 ENSGT00940000178556.b ENSGT00940000170371 ENSGT00940000155536 P. nyererei MODERN SPECIES 721 ENSPNYG00000009600 HACE1 (ENSPNYG00000009533) #22 preb (ENSPNYG00000009506) ENSPNYG00000009493 ADCY3 (ENSPNYG00000009434) WDR26 (ENSPNYG00000009374) CNIH4 (ENSPNYG00000009324) kpna5 (ENSPNYG00000009281) rwdd1 (ENSPNYG00000009251) rrp15 (ENSPNYG00000009219) Haplochromini_B ANCESTRAL SPECIES 88 ENSGT00940000164813 ENSGT00390000008744 ENSGT00940000160345 ENSGT00550000074792.b ENSGT00940000155579.a ENSGT00940000155873 ENSGT00500000044921.b ENSGT00390000003114.e.b.b ENSGT00390000012832 ENSGT01030000234610.a.b ENSGT01030000234610.a.a ENSGT00390000001827 ENSGT00390000002563.a #20 ENSGT00390000002563.b.a.a #19 ENSGT01100000263556.a.b.a.b.d ENSGT00940000155839 #22 ENSGT00390000018031 ENSGT00940000179850 ENSGT00940000156549.a.a ENSGT00940000153634.b.a ENSGT00950000182834.B ENSGT01050000244950.a.a.b ENSGT00390000009168 ENSGT00390000001960 ENSGT00940000155610.o.b Zebra mbuna MODERN SPECIES 1093 HACE1 (ENSMZEG00005025147) #22 preb (ENSMZEG00005025152) ENSMZEG00005025154 ENSMZEG00005025155 ADCY3 (ENSMZEG00005025158) WDR26 (ENSMZEG00005025165) CNIH4 (ENSMZEG00005025169) kpna5 (ENSMZEG00005025170) rwdd1 (ENSMZEG00005025171) rrp15 (ENSMZEG00005025172) ENSMZEG00005025174 ENSMZEG00005025176 GRIK2 (ENSMZEG00005025179) ENSMZEG00005025183 ENSMZEG00005025186 enpp2 (ENSMZEG00005025192) Eastern happy MODERN SPECIES 2 fbl (ENSACLG00000005227) ENSACLG00000005242 sacm1lb (ENSACLG00000005262) SLC6A20 (ENSACLG00000005299) ENSACLG00000005338 ggctb (ENSACLG00000005344) ENSACLG00000005353 gpd1l (ENSACLG00000005357) TCAIM (ENSACLG00000005372) calhm5.1 (ENSACLG00000005412) calhm6 (ENSACLG00000005415) cnot10 (ENSACLG00000005427) bves (ENSACLG00000005470) #20 popdc3 (ENSACLG00000005508) #19 ENSACLG00000005514 HACE1 (ENSACLG00000005525) #22 preb (ENSACLG00000005622) ENSACLG00000005631 ADCY3 (ENSACLG00000005651) WDR26 (ENSACLG00000005793) ENSACLG00000005814 CNIH4 (ENSACLG00000005821) kpna5 (ENSACLG00000005843) rwdd1 (ENSACLG00000005871) rrp15 (ENSACLG00000005886) ENSACLG00000005921 ENSACLG00000006057 GRIK2 (ENSACLG00000006480) ENSACLG00000006494 ENSACLG00000006502 ASCC3 (ENSACLG00000006736) Burton s mouthbrooder MODERN SPECIES 802 ENSHBUG00000010787 HACE1 (ENSHBUG00000010879) #22 preb (ENSHBUG00000010892) ENSHBUG00000010907 ADCY3 (ENSHBUG00000011060) WDR26 (ENSHBUG00000011106) CNIH4 (ENSHBUG00000011128) kpna5 (ENSHBUG00000000752) rwdd1 (ENSHBUG00000011196) rrp15 (ENSHBUG00000011251) Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 440 calhm6 (ENSNBRG00000020788) cnot10 (ENSNBRG00000020802) bves (ENSNBRG00000020841) #20 popdc3 (ENSNBRG00000020859) #19 ENSNBRG00000020870 #22 HACE1 (ENSNBRG00000020887) #22 preb (ENSNBRG00000020923) ADCY3 (ENSNBRG00000021044) WDR26 (ENSNBRG00000021077) CNIH4 (ENSNBRG00000021125) kpna5 (ENSNBRG00000021284) rwdd1 (ENSNBRG00000022011) rrp15 (ENSNBRG00000022031) GRIK2 (ENSNBRG00000022048) ASCC3 (ENSNBRG00000022083) ENSNBRG00000022147 ENSNBRG00000022160 arfrp1 (ENSNBRG00000022174) ENSNBRG00000022185 Lyretail cichlid MODERN SPECIES 440 calhm6 (ENSNBRG00000020788) cnot10 (ENSNBRG00000020802) bves (ENSNBRG00000020841) #20 popdc3 (ENSNBRG00000020859) #19 ENSNBRG00000020870 #22 HACE1 (ENSNBRG00000020887) #22 preb (ENSNBRG00000020923) ADCY3 (ENSNBRG00000021044) WDR26 (ENSNBRG00000021077) CNIH4 (ENSNBRG00000021125) kpna5 (ENSNBRG00000021284) rwdd1 (ENSNBRG00000022011) rrp15 (ENSNBRG00000022031) GRIK2 (ENSNBRG00000022048) ASCC3 (ENSNBRG00000022083) ENSNBRG00000022147 ENSNBRG00000022160 arfrp1 (ENSNBRG00000022174) ENSNBRG00000022185 Percomorphaceae_C ANCESTRAL SPECIES 2 ENSGT00940000166924 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00940000159171 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000008751.a.fb ENSGT00940000157284.cb.a ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B Percomorphaceae_D ANCESTRAL SPECIES 2 ENSGT00940000166924 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00940000159171 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000008751.a.fb ENSGT00940000157284.cb.a ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B ENSGT00390000000420 Carangaria ANCESTRAL SPECIES 1 ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B ENSGT00390000000420 Carangaria_A ANCESTRAL SPECIES 102 ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b Seriola ANCESTRAL SPECIES 227 ENSGT00940000163417 ENSGT00970000193630.c ENSGT00940000155839 #22 Greater amberjack MODERN SPECIES 6 tubb2b (ENSSDUG00000010437) ENSSDUG00000010468 ENSSDUG00000010476 ENSSDUG00000010516 lhx2b (ENSSDUG00000010678) ENSSDUG00000010699 fzd1 (ENSSDUG00000010707) cdk14 (ENSSDUG00000010726) ENSSDUG00000010823 ENSSDUG00000010833 ENSSDUG00000010846 ENSSDUG00000010860 ENSSDUG00000010886 ENSSDUG00000010900 ENSSDUG00000010911 HACE1 (ENSSDUG00000010931) #22 ENSSDUG00000011013 ENSSDUG00000011015 ENSSDUG00000011022 mibp2 (ENSSDUG00000011033) ENSSDUG00000011043 Yellowtail amberjack MODERN SPECIES 2887 ENSSLDG00000001581 HACE1 (ENSSLDG00000001421) #22 Barramundi perch MODERN SPECIES 103 calhm6 (ENSLCAG00010017477) calhm5.1 (ENSLCAG00010017479) rwdd1 (ENSLCAG00010017483) ENSLCAG00010017502 zufsp (ENSLCAG00010017506) kpna5 (ENSLCAG00010017519) popdc3 (ENSLCAG00010017540) #19 bves (ENSLCAG00010017545) #20 HACE1 (ENSLCAG00010017559) #22 GRIK2 (ENSLCAG00010017653) ASCC3 (ENSLCAG00010018250) sim1a (ENSLCAG00010018664) cyb5r4 (ENSLCAG00010018673) cep162 (ENSLCAG00010018688) ENSLCAG00010018723 ADGRB1 (ENSLCAG00010018819) ENSLCAG00010019070 ENSLCAG00010019076 cdk14 (ENSLCAG00010019133) fzd1 (ENSLCAG00010019222) ENSLCAG00010019224 NOD1 (ENSLCAG00010019236) enpp2 (ENSLCAG00010019317) taf2 (ENSLCAG00010019611) Pleuronectoidei ANCESTRAL SPECIES 36 ENSGT00390000000781 ENSGT00940000154686.b ENSGT00940000153393.A ENSGT00510000048187 ENSGT00390000000724.c.b.c ENSGT00940000156554.a ENSGT01030000234510.a.a.a.a.a.a ENSGT01030000234510.a.a.b ENSGT00940000155721.b.b ENSGT00390000012690.a ENSGT00390000001296 ENSGT00940000155488.m.b ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B ENSGT00390000000420 Turbot MODERN SPECIES SEH1L (ENSSMAG00000010604) CEP192 (ENSSMAG00000010573) ENSSMAG00000022451 ldlrad4b (ENSSMAG00000024611) fam210ab (ENSSMAG00000013530) mc5rb (ENSSMAG00000013523) mc2r (ENSSMAG00000013506) zdhhc3a (ENSSMAG00000013466) tmem42a (ENSSMAG00000036827) zgc:77056 (ENSSMAG00000013445) stt3b (ENSSMAG00000013389) ENSSMAG00000013332 ENSSMAG00000013325 #19 bves (ENSSMAG00000013299) #20 ENSSMAG00000029873 HACE1 (ENSSMAG00000013244) #22 ENSSMAG00000013229 ENSSMAG00000013196 ENSSMAG00000013163 GRIK2 (ENSSMAG00000013069) ASCC3 (ENSSMAG00000012927) ENSSMAG00000012852 ENSSMAG00000012822 cep162 (ENSSMAG00000012796) si:ch211-198c19.1 (ENSSMAG00000012784) ENSSMAG00000012562 ENSSMAG00000012538 ENSSMAG00000022180 cdk14 (ENSSMAG00000012453) fzd1 (ENSSMAG00000012440) znrf2b (ENSSMAG00000012426) Tongue sole MODERN SPECIES 4 pabpc1a (ENSCSEG00000013324) rnf19a (ENSCSEG00000013313) ENSCSEG00000013303 ENSCSEG00000013298 ENSCSEG00000013266 fam210ab (ENSCSEG00000013259) mc5rb (ENSCSEG00000013252) mc2r (ENSCSEG00000013247) zdhhc3a (ENSCSEG00000013228) ENSCSEG00000013214 ENSCSEG00000012987 stt3b (ENSCSEG00000012945) ENSCSEG00000012931 popdc3 (ENSCSEG00000012927) #19 bves (ENSCSEG00000012920) #20 HACE1 (ENSCSEG00000012879) #22 GRIK2 (ENSCSEG00000012858) ASCC3 (ENSCSEG00000012811) sim1a (ENSCSEG00000012800) cyb5r4 (ENSCSEG00000012790) cep162 (ENSCSEG00000012708) si:ch211-198c19.1 (ENSCSEG00000012692) ADGRB1 (ENSCSEG00000012463) ENSCSEG00000012398 ENSCSEG00000012388 cdk14 (ENSCSEG00000012376) mag (ENSCSEG00000012361) ENSCSEG00000012340 ENSCSEG00000012336 xrcc1 (ENSCSEG00000012304) ethe1 (ENSCSEG00000012287) Anabantaria ANCESTRAL SPECIES 2 ENSGT00940000156772.a ENSGT00940000166924 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00940000159171 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000008751.a.fb ENSGT00940000157284.cb.a ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B ENSGT00390000000420 Anabantoidei ANCESTRAL SPECIES 3 ENSGT00980000198721 ENSGT00940000156479.a ENSGT00940000158391.g.b.a ENSGT00940000156938.e.f ENSGT00940000157527.a ENSGT00420000029769.a ENSGT00940000160695 ENSGT00940000155365.a.a ENSGT00940000157537 ENSGT00390000016277.a.k ENSGT00940000165015 ENSGT00390000000420 ENSGT00940000155778.B ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155488.m.b ENSGT00390000001296 Climbing perch MODERN SPECIES 7 ENSATEG00000000358 ENSATEG00000000279 ENSATEG00000000218 GASK1A (ENSATEG00000000213) pomgnt2 (ENSATEG00000000202) snrka (ENSATEG00000000153) ano10a (ENSATEG00000000058) ABHD5 (ENSATEG00000024974) ENSATEG00000024973 ENSATEG00000024971 ENSATEG00000024970 ENSATEG00000024968 ENSATEG00000024967 #19 BVES (ENSATEG00000024966) #20 ENSATEG00000024964 HACE1 (ENSATEG00000024958) #22 ENSATEG00000024954 ENSATEG00000024953 ASCC3 (ENSATEG00000024950) sim1a (ENSATEG00000024947) ENSATEG00000024939 ENSATEG00000025434 ENSATEG00000027478 cep162 (ENSATEG00000024925) si:ch211-198c19.1 (ENSATEG00000025638) ENSATEG00000018576 ENSATEG00000005976 ENSATEG00000024920 ENSATEG00000024919 ENSATEG00000024917 cdk14 (ENSATEG00000024914) Siamese fighting fish MODERN SPECIES 7 ENSBSLG00000017890 ccne2 (ENSBSLG00000017863) tp53inp1 (ENSBSLG00000017840) nagpa (ENSBSLG00000017812) NDUFAF6 (ENSBSLG00000017770) ENSBSLG00000017762 plekhf2 (ENSBSLG00000017752) wdr73 (ENSBSLG00000017706) ENSBSLG00000017681 ENSBSLG00000017672 zgc:113232 (ENSBSLG00000017644) snrnp48 (ENSBSLG00000017622) ano10a (ENSBSLG00000016835) ABHD5 (ENSBSLG00000015438) ENSBSLG00000015422 HACE1 (ENSBSLG00000014741) #22 ENSBSLG00000014641 ENSBSLG00000014409 GRIK2 (ENSBSLG00000012028) ENSBSLG00000011724 ENSBSLG00000011705 ENSBSLG00000011667 ENSBSLG00000011642 ENSBSLG00000011611 ENSBSLG00000011195 si:ch211-198c19.1 (ENSBSLG00000011187) ENSBSLG00000011168 ENSBSLG00000011148 ADGRB1 (ENSBSLG00000010112) ENSBSLG00000010028 ENSBSLG00000010015 Zig-zag eel MODERN SPECIES 7 ENSMAMG00000027365 ENSMAMG00000006708 ENSMAMG00000006649 ENSMAMG00000006621 ENSMAMG00000006612 ENSMAMG00000006583 ENSMAMG00000006451 preb (ENSMAMG00000006422) lyplal1 (ENSMAMG00000025283) tgfb2 (ENSMAMG00000006402) RRP15 (ENSMAMG00000006386) ENSMAMG00000006363 ENSMAMG00000006341 POPDC3 (ENSMAMG00000006326) #19 BVES (ENSMAMG00000006300) #20 HACE1 (ENSMAMG00000006246) #22 ENSMAMG00000006225 ENSMAMG00000006213 ENSMAMG00000006196 GRIK2 (ENSMAMG00000006116) ASCC3 (ENSMAMG00000005917) sim1a (ENSMAMG00000005857) ENSMAMG00000005841 ENSMAMG00000005816 ENSMAMG00000026687 cep162 (ENSMAMG00000005785) ENSMAMG00000005760 ENSMAMG00000005710 ENSMAMG00000005686 ENSMAMG00000005679 ENSMAMG00000005671 Eupercaria ANCESTRAL SPECIES 1 ENSGT00940000166924 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00940000159171 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000008751.a.fb ENSGT00940000157284.cb.a ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT00940000167456 ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 Tetraodontidae ANCESTRAL SPECIES ENSGT00940000155839 #22 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 26 KNDC1 (ENSTNIG00000017081) vox (ENSTNIG00000001621) ENSTNIG00000017080 ENSTNIG00000017079 dntt (ENSTNIG00000017078) blnk (ENSTNIG00000001501) tiprl (ENSTNIG00000014243) PPP1R14A (ENSTNIG00000014242) ENSTNIG00000014241 tfap2b (ENSTNIG00000014240) tfap2b (ENSTNIG00000014239) ENSTNIG00000014237 ENSTNIG00000014236 ENSTNIG00000014204 bves (ENSTNIG00000014202) #20 HACE1 (ENSTNIG00000014201) #22 aip (ENSTNIG00000014182) cdk2ap2 (ENSTNIG00000014181) GPR83 (ENSTNIG00000014180) ankrd49 (ENSTNIG00000014179) cacna1fb (ENSTNIG00000014174) ENSTNIG00000014173 ENSTNIG00000014172 ENSTNIG00000014171 ENSTNIG00000001067 hccsb (ENSTNIG00000014170) ENSTNIG00000001074 ENSTNIG00000000608 ENSTNIG00000001198 inhbab (ENSTNIG00000014168) ENSTNIG00000000004 Tetraodon MODERN SPECIES 26 ptbp1a (ENSTNIG00000002060) chchd2 (ENSTNIG00000002061) ENSTNIG00000002062 FAM163B (ENSTNIG00000000629) srd5a1 (ENSTNIG00000002063) ENSTNIG00000002065 paqr3a (ENSTNIG00000002066) ENSTNIG00000002067 ENSTNIG00000002068 ENSTNIG00000000257 ENSTNIG00000002069 ENSTNIG00000002070 ENSTNIG00000002071 TOB2 (ENSTNIG00000002073) ENSTNIG00000019753 ENSTNIG00000002075 #22 panx1a (ENSTNIG00000002076) gmppb (ENSTNIG00000002077) ENSTNIG00000002078 ENSTNIG00000002079 crlf3 (ENSTNIG00000011283) ENSTNIG00000002080 ENSTNIG00000002081 ENSTNIG00000002082 ENSTNIG00000002083 ENSTNIG00000002084 gata5 (ENSTNIG00000002085) naprt (ENSTNIG00000002087) ENSTNIG00000002089 ENSTNIG00000001600 ENSTNIG00000002090 Eupecaria_A ANCESTRAL SPECIES 2 ENSGT00940000166924 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00940000159171 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000008751.a.fb ENSGT00940000157284.cb.a ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B Eupecaria_B ANCESTRAL SPECIES 4 ENSGT00940000166924 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00940000159171 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000008751.a.fb ENSGT00940000157284.cb.a ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B Eupecaria_C ANCESTRAL SPECIES 2 ENSGT00940000166924 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00940000159171 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000008751.a.fb ENSGT00940000157284.cb.a ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B ENSGT00390000000420 Eupercaria_incertae_sedis ANCESTRAL SPECIES 2 ENSGT00940000166924 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00940000159171 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000008751.a.fb ENSGT00940000157284.cb.a ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B ENSGT00390000000420 European seabass MODERN SPECIES 6 kpna5 (ENSDLAG00005021221) gprc6a (ENSDLAG00005021197) ENSDLAG00005021190 ENSDLAG00005020985 ENSDLAG00005020622 preb (ENSDLAG00005020592) lyplal1 (ENSDLAG00005020575) tgfb2 (ENSDLAG00005020553) RRP15 (ENSDLAG00005020551) ENSDLAG00005020542 ENSDLAG00005031481 ENSDLAG00005028713 ENSDLAG00005016634 POPDC3 (ENSDLAG00005033400) #19 bves (ENSDLAG00005033485) #20 HACE1 (ENSDLAG00005019835) #22 ENSDLAG00005016497 GRIK2 (ENSDLAG00005018623) ENSDLAG00005032683 ASCC3 (ENSDLAG00005017610) sim1a (ENSDLAG00005017568) ENSDLAG00005017558 ENSDLAG00005017542 cep162 (ENSDLAG00005017464) si:ch211-198c19.1 (ENSDLAG00005017455) ENSDLAG00005017450 ENSDLAG00005015703 ENSDLAG00005015646 ENSDLAG00005015634 cdk14 (ENSDLAG00005034819) fzd1 (ENSDLAG00005015381) Large yellow croaker MODERN SPECIES 484 ENSLCRG00005003604 GABPB2 (ENSLCRG00005003605) CASP3 (ENSLCRG00005003607) ptpn23a (ENSLCRG00005003619) SCAP (ENSLCRG00005003632) ENSLCRG00005003667 elp6 (ENSLCRG00005003668) CSPG5 (ENSLCRG00005003669) ENSLCRG00005003700 ENSLCRG00005006793 ENSLCRG00005006796 ENSLCRG00005006802 ENSLCRG00005006803 popdc3 (ENSLCRG00005006805) #19 bves (ENSLCRG00005006806) #20 HACE1 (ENSLCRG00005006812) #22 ENSLCRG00005007035 ENSLCRG00005007036 ENSLCRG00005007826 ENSLCRG00005007827 ENSLCRG00005007829 ENSLCRG00005007831 ENSLCRG00005007832 ctrb.3 (ENSLCRG00005007834) ENSLCRG00005007835 taf2 (ENSLCRG00005007844) enpp2 (ENSLCRG00005008611) NOD1 (ENSLCRG00005010278) znrf2b (ENSLCRG00005010283) mibp2 (ENSLCRG00005010284) fzd1 (ENSLCRG00005010286) Gilthead seabream MODERN SPECIES 8 ENSSAUG00010003665 ggctb (ENSSAUG00010003680) TCAIM (ENSSAUG00010003728) ENSSAUG00010003736 ENSSAUG00010003741 ENSSAUG00010003747 cnot10 (ENSSAUG00010003783) rwdd1 (ENSSAUG00010003951) ENSSAUG00010003958 ENSSAUG00010003961 kpna5 (ENSSAUG00010003989) sacm1lb (ENSSAUG00010005215) ENSSAUG00010007239 ENSSAUG00010007245 ENSSAUG00010007247 HACE1 (ENSSAUG00010007260) #22 ENSSAUG00010007294 ENSSAUG00010007297 ENSSAUG00010007302 GDF10 (ENSSAUG00010007308) ENSSAUG00010007312 ENSSAUG00010007314 ENSSAUG00010007318 ENSSAUG00010007320 ENSSAUG00010007322 GRIK2 (ENSSAUG00010007367) ASCC3 (ENSSAUG00010009349) sim1a (ENSSAUG00010009527) cyb5r4 (ENSSAUG00010009581) cep162 (ENSSAUG00010009598) ADGRB1 (ENSSAUG00010009657) Perciformes ANCESTRAL SPECIES 3 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00940000159171 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000008751.a.fb ENSGT00940000157284.cb.a ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B Cottioidei ANCESTRAL SPECIES 75 ENSGT00390000002563.a #20 ENSGT00390000002563.b.a.a #19 ENSGT01050000244950.a.a.b ENSGT00940000158416.q.a ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00390000018031 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000008751.a.fb ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00940000159017.a.a ENSGT00940000179051 ENSGT00940000162584.j.b ENSGT00940000157640 ENSGT00940000164984 ENSGT00940000167456 ENSGT00940000157432.B ENSGT00940000169325 ENSGT00390000009631 Lumpfish MODERN SPECIES 17 CLIP3 (ENSCLMG00005006780) timm50 (ENSCLMG00005006781) ENSCLMG00005006790 tpst1 (ENSCLMG00005006791) bves (ENSCLMG00005006792) #20 popdc3 (ENSCLMG00005006793) #19 kpna5 (ENSCLMG00005006796) gprc6a (ENSCLMG00005007925) CNIH4 (ENSCLMG00005007930) WDR26 (ENSCLMG00005007936) ADCY3 (ENSCLMG00005007965) preb (ENSCLMG00005007971) tgfb2 (ENSCLMG00005007972) rrp15 (ENSCLMG00005007976) NAGA (ENSCLMG00005007982) HACE1 (ENSCLMG00005002926) #22 ENSCLMG00005003131 ENSCLMG00005003136 GRIK2 (ENSCLMG00005003156) ASCC3 (ENSCLMG00005003396) sim1a (ENSCLMG00005005661) ENSCLMG00005005668 fzd1 (ENSCLMG00005005670) cdk14 (ENSCLMG00005005673) ENSCLMG00005005674 ENSCLMG00005005675 ADGRB1 (ENSCLMG00005005682) si:ch211-198c19.1 (ENSCLMG00005005697) cep162 (ENSCLMG00005005699) LAPTM4B (ENSCLMG00005005701) MATN2 (ENSCLMG00005005704) Stickleback MODERN SPECIES 19 ctps1b (ENSGACG00000013968) rab42b (ENSGACG00000013998) taf12 (ENSGACG00000014000) si:ch211-79k12.1 (ENSGACG00000014009) vegfaa (ENSGACG00000014012) bves (ENSGACG00000014015) #20 popdc3 (ENSGACG00000014023) #19 CNIH4 (ENSGACG00000014027) WDR26 (ENSGACG00000014036) ADCY3 (ENSGACG00000014041) preb (ENSGACG00000014044) ENSGACG00000014059 tgfb2 (ENSGACG00000014061) rrp15 (ENSGACG00000014078) NAGA (ENSGACG00000014083) HACE1 (ENSGACG00000014110) #22 GRIK2 (ENSGACG00000014132) ASCC3 (ENSGACG00000014141) sim1a (ENSGACG00000014149) cyb5r4 (ENSGACG00000014157) znrf2b (ENSGACG00000014176) ENSGACG00000014185 fzd1 (ENSGACG00000014192) cdk14 (ENSGACG00000014194) ENSGACG00000014204 ENSGACG00000014210 ENSGACG00000014214 ADGRB1 (ENSGACG00000014218) ENSGACG00000014222 Perciformes_a ANCESTRAL SPECIES 38 ENSGT00940000158416.q.a ENSGT00950000182834.B ENSGT00940000153634.b.a ENSGT00940000156549.a.a ENSGT00940000159171 ENSGT00940000157390 ENSGT00390000001960 ENSGT00390000008751.a.fb ENSGT00940000157284.cb.a ENSGT01000000214440.A.a.b.a.g.b.b ENSGT00390000002563.b.a.a #19 ENSGT00390000002563.a #20 ENSGT00940000155839 #22 ENSGT00940000155610.o.b ENSGT00940000155377 ENSGT00940000156143.a.a ENSGT00940000155536 ENSGT00650000093438 ENSGT00390000009631 ENSGT00940000169325 ENSGT00940000157432.B ENSGT01000000214440.A.a.a ENSGT00940000164984 ENSGT00940000157640 ENSGT00940000162584.j.b ENSGT00940000159017.a.a ENSGT00940000157845 ENSGT00940000155778.B Pike perch MODERN SPECIES 273 ENSSLUG00000020516 vegfaa (ENSSLUG00000020512) ENSSLUG00000020506 ENSSLUG00000020499 STX12 (ENSSLUG00000020488) popdc3 (ENSSLUG00000020482) #19 bves (ENSSLUG00000020474) #20 HACE1 (ENSSLUG00000020398) #22 Channel bull blenny MODERN SPECIES 7 mc2r (ENSCGOG00000018634) ENSCGOG00000018635 gprc6a (ENSCGOG00000018636) CNIH4 (ENSCGOG00000018637) WDR26 (ENSCGOG00000018640) ADCY3 (ENSCGOG00000018825) lyplal1 (ENSCGOG00000018950) tgfb2 (ENSCGOG00000018956) rrp15 (ENSCGOG00000018974) NAGA (ENSCGOG00000018981) ENSCGOG00000019109 vegfaa (ENSCGOG00000019110) STX12 (ENSCGOG00000019111) popdc3 (ENSCGOG00000019172) #19 bves (ENSCGOG00000019173) #20 HACE1 (ENSCGOG00000019193) #22 GRIK2 (ENSCGOG00000019789) ASCC3 (ENSCGOG00000021389) sim1a (ENSCGOG00000022770) ENSCGOG00000022771 cyb5r4 (ENSCGOG00000022772) cep162 (ENSCGOG00000022795) si:ch211-198c19.1 (ENSCGOG00000022809) ADGRB1 (ENSCGOG00000022818) ENSCGOG00000022977 ENSCGOG00000022981 ENSCGOG00000022982 ENSCGOG00000009986 cdk14 (ENSCGOG00000009990) fzd1 (ENSCGOG00000010153) ENSCGOG00000010154 Ballan wrasse MODERN SPECIES 926 bves (ENSLBEG00000006052) #20 HACE1 (ENSLBEG00000006142) #22 ENSLBEG00000006261 Elephant shark MODERN SPECIES 1551 ENSCMIG00000008338 GATC (ENSCMIG00000008344) ENSCMIG00000008346 ENSCMIG00000008348 bend3 (ENSCMIG00000008351) #8 mtres1 (ENSCMIG00000008352) #9 qrsl1 (ENSCMIG00000008358) #12 rtn4ip1 (ENSCMIG00000008378) #13 ENSCMIG00000008385 #14 atg5 (ENSCMIG00000008396) #16 prdm1a (ENSCMIG00000008406) #17 prep (ENSCMIG00000008444) #18 popdc3 (ENSCMIG00000008546) #19 bves (ENSCMIG00000008548) #20 lin28b (ENSCMIG00000008556) #21 HACE1 (ENSCMIG00000008566) #22 ENSCMIG00000008576 GRIK2 (ENSCMIG00000008642) ASCC3 (ENSCMIG00000008922) sim1a (ENSCMIG00000008944)