Gnathostomata	ANCESTRAL SPECIES	8	ENSGT00940000158977	ENSGT00950000183030	ENSGT00940000160744	ENSGT00940000154295	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000163243	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000165649	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000169575	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT01010000222692	ENSGT00940000157237 #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b
Euteleostomi	ANCESTRAL SPECIES	28	ENSGT00960000186941	ENSGT00950000183030	ENSGT00940000160744	ENSGT00940000154295	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000169575	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00940000166460	ENSGT00530000063614.a.a #28	ENSGT01010000222692	ENSGT00940000157237 #27	ENSGT00940000158737 #26	ENSGT00910000148238	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234
Sarcopterygii	ANCESTRAL SPECIES	25	ENSGT00960000186941	ENSGT00950000183030	ENSGT00940000160744	ENSGT00940000154295	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000169575	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00940000166460	ENSGT00530000063614.a.a #28	ENSGT01010000222692	ENSGT00940000157237 #27	ENSGT00940000158737 #26	ENSGT00910000148238	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234
Tetrapoda	ANCESTRAL SPECIES		ENSGT00960000186941	ENSGT00950000183030	ENSGT00940000160744	ENSGT00940000154295	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT01010000222692	ENSGT00940000157237 #27	ENSGT00940000158737 #26	ENSGT00910000148238	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b
Amniota	ANCESTRAL SPECIES		ENSGT01020000230360.c.b.b	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614	ENSGT00390000016769	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT01010000222692	ENSGT00940000157237 #27	ENSGT00940000158737 #26	ENSGT00910000148238	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b
Mammalia	ANCESTRAL SPECIES		ENSGT01020000230360.c.b.b	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614	ENSGT00390000016769	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT01010000222692	ENSGT00940000157237 #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724
Theria	ANCESTRAL SPECIES	1	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT01010000222692	ENSGT00940000157237 #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000169724
Eutheria	ANCESTRAL SPECIES	17	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28
Boreoeutheria	ANCESTRAL SPECIES	15	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958
Primates	ANCESTRAL SPECIES	14	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00910000148146	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Strepsirrhini	ANCESTRAL SPECIES	31	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00910000148146	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237.e #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Lemuriformes	ANCESTRAL SPECIES	19	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00910000148146	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237.e #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Lemuriformes_a	ANCESTRAL SPECIES	36	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00910000148146	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237.e #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Greater bamboo lemur	MODERN SPECIES	434														TSGA10 (ENSPSMG00000022974) #20	CRACDL (ENSPSMG00000022970) #21	MGAT4A (ENSPSMG00000022958) #22	UNC50 (ENSPSMG00000022932) #23	COA5 (ENSPSMG00000022922) #24	INPP4A (ENSPSMG00000022648) #25	CNGA3 (ENSPSMG00000022298) #26	VWA3B (ENSPSMG00000022285) #27	TMEM131 (ENSPSMG00000022262) #28	ZAP70 (ENSPSMG00000022209) #29	C2orf92 (ENSPSMG00000022206) #30	ACTR1B (ENSPSMG00000022190) #31	COX5B (ENSPSMG00000022177) #32	ENSPSMG00000022173 #33	ENSPSMG00000022168 #34	SEMA4C (ENSPSMG00000022165) #35	ANKRD39 (ENSPSMG00000022152) #36	ANKRD23 (ENSPSMG00000022145) #37
Coquerels sifaka	MODERN SPECIES	239	LONRF2 (ENSPCOG00000018384)	ENSPCOG00000018157	AFF3 (ENSPCOG00000016986)	REV1 (ENSPCOG00000013107)	ENSPCOG00000019508	TXNDC9 (ENSPCOG00000021836)	ENSPCOG00000016872	LYG1 (ENSPCOG00000018144)	LYG2 (ENSPCOG00000025362)	ENSPCOG00000013471	MITD1 (ENSPCOG00000018368)	C2orf15 (ENSPCOG00000024086)	TSGA10 (ENSPCOG00000024833) #20	ENSPCOG00000019318	CRACDL (ENSPCOG00000024966) #21	MGAT4A (ENSPCOG00000023435) #22	UNC50 (ENSPCOG00000028406) #23	COA5 (ENSPCOG00000018205) #24	INPP4A (ENSPCOG00000025221) #25	CNGA3 (ENSPCOG00000022115) #26	VWA3B (ENSPCOG00000022469) #27	TMEM131 (ENSPCOG00000025868) #28	ZAP70 (ENSPCOG00000025979) #29	C2orf92 (ENSPCOG00000018785) #30	ACTR1B (ENSPCOG00000015069) #31	ENSPCOG00000015780 #32	ENSPCOG00000028034 #33	SEMA4C (ENSPCOG00000014702) #35	ANKRD39 (ENSPCOG00000019032) #36	ANKRD23 (ENSPCOG00000018094) #37	CNNM3 (ENSPCOG00000015331)
Mouse lemur	MODERN SPECIES	26	CHST10 (ENSMICG00000028158)	NMS (ENSMICG00000000057)	ENSMICG00000000657	LONRF2 (ENSMICG00000000058)	AFF3 (ENSMICG00000016001)	REV1 (ENSMICG00000015977)	EIF5B (ENSMICG00000015960)	ENSMICG00000015951	LYG1 (ENSMICG00000046017)	LYG2 (ENSMICG00000011632)	ENSMICG00000011627	MITD1 (ENSMICG00000011617)	C2orf15 (ENSMICG00000011610)	TSGA10 (ENSMICG00000011594) #20	CRACDL (ENSMICG00000030014) #21	MGAT4A (ENSMICG00000011397) #22	UNC50 (ENSMICG00000028576) #23	COA5 (ENSMICG00000036770) #24	INPP4A (ENSMICG00000013336) #25	CNGA3 (ENSMICG00000013329) #26	ENSMICG00000035445	VWA3B (ENSMICG00000001892) #27	TMEM131 (ENSMICG00000007434) #28	ZAP70 (ENSMICG00000007422) #29	C2orf92 (ENSMICG00000045476) #30	ACTR1B (ENSMICG00000007406) #31	COX5B (ENSMICG00000043097) #32	ENSMICG00000033142 #33	SEMA4C (ENSMICG00000044163) #35	ANKRD39 (ENSMICG00000042630) #36	ANKRD23 (ENSMICG00000012604) #37
Bushbaby	MODERN SPECIES	194	NMS (ENSOGAG00000015135)	CHST10 (ENSOGAG00000008178)	ENSOGAG00000027230	LONRF2 (ENSOGAG00000003794)	AFF3 (ENSOGAG00000013262)	REV1 (ENSOGAG00000013247)	EIF5B (ENSOGAG00000013238)	TXNDC9 (ENSOGAG00000013234)	LYG1 (ENSOGAG00000013231)	LYG2 (ENSOGAG00000002242)	ENSOGAG00000002241	MITD1 (ENSOGAG00000002240)	LIPT1 (ENSOGAG00000002238)	ENSOGAG00000002233 #20	CRACDL (ENSOGAG00000002228) #21	MGAT4A (ENSOGAG00000011487) #22	UNC50 (ENSOGAG00000011484) #23	COA5 (ENSOGAG00000011481) #24	INPP4A (ENSOGAG00000011474) #25	CNGA3 (ENSOGAG00000028766) #26
Haplorrhini	ANCESTRAL SPECIES	37	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00910000148146	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Tarsier	MODERN SPECIES	5847																MGAT4A (ENSTSYG00000002046) #22	UNC50 (ENSTSYG00000002036) #23	COA5 (ENSTSYG00000002027) #24	INPP4A (ENSTSYG00000001944) #25	CNGA3 (ENSTSYG00000005480) #26	VWA3B (ENSTSYG00000009987) #27	ENSTSYG00000036729	LMO1 (ENSTSYG00000009552)	ENSTSYG00000036065
Simiiformes	ANCESTRAL SPECIES	14	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00910000148146	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00910000148146	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Hominoidea	ANCESTRAL SPECIES	30	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645.q	ENSGT00940000163829	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Hominidae	ANCESTRAL SPECIES	28	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645.q	ENSGT00940000163829	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	29	ENSGT00940000154639.n.b	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645.q	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548.i #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Gorilla	MODERN SPECIES	14	ENSGGOG00000026122	CHST10 (ENSGGOG00000011750)	LONRF2 (ENSGGOG00000004914)	AFF3 (ENSGGOG00000034914)	REV1 (ENSGGOG00000001728)	EIF5B (ENSGGOG00000001721)	TXNDC9 (ENSGGOG00000024615)	LYG1 (ENSGGOG00000022626)	LYG2 (ENSGGOG00000025984)	MRPL30 (ENSGGOG00000041571)	MITD1 (ENSGGOG00000024270)	LIPT1 (ENSGGOG00000026223)	ENSGGOG00000034962	TSGA10 (ENSGGOG00000012338) #20	KIAA1211L (ENSGGOG00000001883) #21	MGAT4A (ENSGGOG00000006681) #22	UNC50 (ENSGGOG00000002480) #23	COA5 (ENSGGOG00000006019) #24	INPP4A (ENSGGOG00000006003) #25	CNGA3 (ENSGGOG00000003067) #26	VWA3B (ENSGGOG00000012819) #27	TMEM131 (ENSGGOG00000001521) #28	ZAP70 (ENSGGOG00000001518) #29	ENSGGOG00000043289 #30	COX5B (ENSGGOG00000001142) #32	ENSGGOG00000016269	ENSGGOG00000037354	ENSGGOG00000028199	ENSGGOG00000036623	ENSGGOG00000022849	ENSGGOG00000014612 #33
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645.q	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548.i #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Human	MODERN SPECIES	11	CHST10 (ENSG00000115526)	LONRF2 (ENSG00000170500)	AFF3 (ENSG00000144218)	REV1 (ENSG00000135945)	EIF5B (ENSG00000158417)	TXNDC9 (ENSG00000115514)	LYG1 (ENSG00000144214)	LYG2 (ENSG00000185674)	MRPL30 (ENSG00000185414)	MITD1 (ENSG00000158411)	ENSG00000273155	LIPT1 (ENSG00000144182)	C2orf15 (ENSG00000273045)	TSGA10 (ENSG00000135951) #20	CRACDL (ENSG00000196872) #21	MGAT4A (ENSG00000071073) #22	UNC50 (ENSG00000115446) #23	COA5 (ENSG00000183513) #24	INPP4A (ENSG00000040933) #25	CNGA3 (ENSG00000144191) #26	VWA3B (ENSG00000168658) #27	TMEM131 (ENSG00000075568) #28	ZAP70 (ENSG00000115085) #29	C2orf92 (ENSG00000228486) #30	ACTR1B (ENSG00000115073) #31	COX5B (ENSG00000135940) #32	ANKRD36B (ENSG00000196912)	ANKRD36 (ENSG00000135976)	FAHD2B (ENSG00000144199)	FAM178B (ENSG00000168754) #33	SEMA4C (ENSG00000168758) #35
Pan	ANCESTRAL SPECIES	33	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645.q	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548.i #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00910000147690	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Bonobo	MODERN SPECIES	14	ENSPPAG00000028037	NMS (ENSPPAG00000037891)	CHST10 (ENSPPAG00000039194)	ENSPPAG00000039170	AFF3 (ENSPPAG00000032057)	REV1 (ENSPPAG00000031053)	EIF5B (ENSPPAG00000029857)	TXNDC9 (ENSPPAG00000039478)	LYG1 (ENSPPAG00000035330)	LYG2 (ENSPPAG00000033405)	MRPL30 (ENSPPAG00000038932)	MITD1 (ENSPPAG00000029094)	ENSPPAG00000031150	TSGA10 (ENSPPAG00000038741) #20	ENSPPAG00000033390 #21	MGAT4A (ENSPPAG00000041817) #22	UNC50 (ENSPPAG00000036144) #23	COA5 (ENSPPAG00000037935) #24	INPP4A (ENSPPAG00000029726) #25	ENSPPAG00000039061	CNGA3 (ENSPPAG00000040765) #26	ENSPPAG00000027866 #27	ENSPPAG00000035125 #27	ENSPPAG00000023029	TMEM131 (ENSPPAG00000027555) #28	ZAP70 (ENSPPAG00000008568) #29	C2orf92 (ENSPPAG00000028150) #30	ACTR1B (ENSPPAG00000023188) #31	COX5B (ENSPPAG00000041629) #32	FAM178B (ENSPPAG00000031134) #33	SEMA4C (ENSPPAG00000036456) #35
Chimpanzee	MODERN SPECIES	14	NMS (ENSPTRG00000030401)	CHST10 (ENSPTRG00000012284)	LONRF2 (ENSPTRG00000012282)	AFF3 (ENSPTRG00000012281)	REV1 (ENSPTRG00000012280)	EIF5B (ENSPTRG00000012279)	TXNDC9 (ENSPTRG00000012278)	LYG1 (ENSPTRG00000012277)	LYG2 (ENSPTRG00000012276)	MRPL30 (ENSPTRG00000012275)	MITD1 (ENSPTRG00000012274)	LIPT1 (ENSPTRG00000012273)	C2AH2orf15 (ENSPTRG00000051140)	TSGA10 (ENSPTRG00000012271) #20	CRACDL (ENSPTRG00000023576) #21	MGAT4A (ENSPTRG00000012269) #22	UNC50 (ENSPTRG00000012268) #23	COA5 (ENSPTRG00000012267) #24	INPP4A (ENSPTRG00000012266) #25	ENSPTRG00000038685	CNGA3 (ENSPTRG00000012265) #26	VWA3B (ENSPTRG00000012263) #27	ENSPTRG00000043698	TMEM131 (ENSPTRG00000012260) #28	ZAP70 (ENSPTRG00000012259) #29	C2orf92 (ENSPTRG00000049053) #30	ACTR1B (ENSPTRG00000012258) #31	COX5B (ENSPTRG00000012257) #32	ENSPTRG00000042800	ENSPTRG00000045253	ENSPTRG00000050148
Orangutan	MODERN SPECIES	14	PDCL3 (ENSPPYG00000012100)	ENSPPYG00000006487	NMS (ENSPPYG00000012099)	CHST10 (ENSPPYG00000012098)	LONRF2 (ENSPPYG00000012097)	AFF3 (ENSPPYG00000012096)	REV1 (ENSPPYG00000012095)	EIF5B (ENSPPYG00000012094)	TXNDC9 (ENSPPYG00000036699)	ENSPPYG00000035486	ENSPPYG00000040179	LIPT1 (ENSPPYG00000012091)	ENSPPYG00000012090	TSGA10 (ENSPPYG00000012089) #20	CRACDL (ENSPPYG00000035045) #21	MGAT4A (ENSPPYG00000012087) #22	UNC50 (ENSPPYG00000012086) #23	COA5 (ENSPPYG00000012085) #24	INPP4A (ENSPPYG00000012084) #25	CNGA3 (ENSPPYG00000012083) #26	VWA3B (ENSPPYG00000012082) #27	TMEM131 (ENSPPYG00000012081) #28	ZAP70 (ENSPPYG00000012080) #29	C2orf92 (ENSPPYG00000030027) #30	ACTR1B (ENSPPYG00000012079) #31	COX5B (ENSPPYG00000033763) #32	FAM178B (ENSPPYG00000035174) #33	SEMA4C (ENSPPYG00000012724) #35	ENSPPYG00000035837	ANKRD39 (ENSPPYG00000012723) #36	ANKRD23 (ENSPPYG00000012700) #37
Gibbon	MODERN SPECIES	4	ENSNLEG00000034185	NARF (ENSNLEG00000002293)	CYBC1 (ENSNLEG00000002286)	ENSNLEG00000002284	OGFOD3 (ENSNLEG00000002243)	UTS2R (ENSNLEG00000018814)	TEX19 (ENSNLEG00000035142)	SECTM1 (ENSNLEG00000031948)	LYG1 (ENSNLEG00000002173)	LYG2 (ENSNLEG00000002136)	ENSNLEG00000027490	MITD1 (ENSNLEG00000002091)	LIPT1 (ENSNLEG00000002082)	ENSNLEG00000029264 #20	ENSNLEG00000002071 #21	MGAT4A (ENSNLEG00000002048) #22	UNC50 (ENSNLEG00000002003) #23	COA5 (ENSNLEG00000036110) #24	INPP4A (ENSNLEG00000001841) #25	CNGA3 (ENSNLEG00000001782) #26	VWA3B (ENSNLEG00000033568) #27	TMEM131 (ENSNLEG00000001650) #28	ZAP70 (ENSNLEG00000001558) #29	C2orf92 (ENSNLEG00000029397) #30	FAM178B (ENSNLEG00000001545) #33	SEMA4C (ENSNLEG00000029041) #35	ENSNLEG00000001455	ANKRD39 (ENSNLEG00000001438) #36	ANKRD23 (ENSNLEG00000001424) #37	ENSNLEG00000001416	CNNM4 (ENSNLEG00000007800)
Cercopithecidae	ANCESTRAL SPECIES	32	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00910000148146	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00910000148146	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Vervet Monkey	MODERN SPECIES	5	NPAS2 (ENSCSAG00000017176)	ENSCSAG00000017183	CHST10 (ENSCSAG00000017188)	LONRF2 (ENSCSAG00000017190)	AFF3 (ENSCSAG00000017193)	REV1 (ENSCSAG00000017200)	EIF5B (ENSCSAG00000017209)	TXNDC9 (ENSCSAG00000017212)	LYG1 (ENSCSAG00000017213)	LYG2 (ENSCSAG00000017216)	MRPL30 (ENSCSAG00000017218)	LIPT1 (ENSCSAG00000019427)	MITD1 (ENSCSAG00000017222)	TSGA10 (ENSCSAG00000017227) #20	CRACDL (ENSCSAG00000017230) #21	MGAT4A (ENSCSAG00000017232) #22	UNC50 (ENSCSAG00000017235) #23	COA5 (ENSCSAG00000017236) #24	INPP4A (ENSCSAG00000017242) #25	CNGA3 (ENSCSAG00000017249) #26	ENSCSAG00000017252	ENSCSAG00000017259	VWA3B (ENSCSAG00000017270) #27	TMEM131 (ENSCSAG00000017278) #28	ZAP70 (ENSCSAG00000017281) #29	ACTR1B (ENSCSAG00000017285) #31	COX5B (ENSCSAG00000017287) #32	FAM178B (ENSCSAG00000017288) #33	SEMA4C (ENSCSAG00000017290) #35	ANKRD39 (ENSCSAG00000017294) #36	ANKRD23 (ENSCSAG00000017307) #37
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00390000018085.a.a.b.f.b.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00910000148146	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553.g #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Macaca	ANCESTRAL SPECIES	28	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00390000018085.a.a.b.f.b.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00910000148146	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553.g #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Pig-tailed macaque	MODERN SPECIES	165	LONRF2 (ENSMNEG00000039849)	AFF3 (ENSMNEG00000031770)	ENSMNEG00000026095	REV1 (ENSMNEG00000033432)	EIF5B (ENSMNEG00000040038)	TXNDC9 (ENSMNEG00000043080)	LYG1 (ENSMNEG00000032303)	LYG2 (ENSMNEG00000030728)	MRPL30 (ENSMNEG00000034146)	MITD1 (ENSMNEG00000043820)	LIPT1 (ENSMNEG00000028962)	ENSMNEG00000043547	C2orf15 (ENSMNEG00000039507)	TSGA10 (ENSMNEG00000035335) #20	CRACDL (ENSMNEG00000035921) #21	MGAT4A (ENSMNEG00000045427) #22	UNC50 (ENSMNEG00000035652) #23	ENSMNEG00000039703	COA5 (ENSMNEG00000034189) #24	INPP4A (ENSMNEG00000041532) #25	CNGA3 (ENSMNEG00000040084) #26	VWA3B (ENSMNEG00000034359) #27	ENSMNEG00000026472	TMEM131 (ENSMNEG00000004878) #28	ZAP70 (ENSMNEG00000037274) #29	C2orf92 (ENSMNEG00000029286) #30	ACTR1B (ENSMNEG00000043916) #31	ENSMNEG00000034168 #32	FAM178B (ENSMNEG00000040821) #33	SEMA4C (ENSMNEG00000041651) #35	ENSMNEG00000035488
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.b.a.a.b.b.a.a	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT01100000263509.a.a.b.b.a.b.b.b.a.b	ENSGT00390000018553.g #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Rhesus	MODERN SPECIES	4	LONRF2 (ENSMMUG00000017455)	ENSMMUG00000055089	AFF3 (ENSMMUG00000022836)	REV1 (ENSMMUG00000015515)	EIF5B (ENSMMUG00000018946)	TXNDC9 (ENSMMUG00000018947)	LYG1 (ENSMMUG00000056414)	LYG2 (ENSMMUG00000018017)	ENSMMUG00000061050	MITD1 (ENSMMUG00000000572)	MRPL30 (ENSMMUG00000038088)	C13H2orf15 (ENSMMUG00000048540)	TSGA10 (ENSMMUG00000043786) #20	ENSMMUG00000050762	CRACDL (ENSMMUG00000017655) #21	MGAT4A (ENSMMUG00000022909) #22	ENSMMUG00000058028	UNC50 (ENSMMUG00000022907) #23	COA5 (ENSMMUG00000055665) #24	INPP4A (ENSMMUG00000022903) #25	CNGA3 (ENSMMUG00000021187) #26	VWA3B (ENSMMUG00000021185) #27	ENSMMUG00000056633	TMEM131 (ENSMMUG00000011428) #28	ZAP70 (ENSMMUG00000021545) #29	C13H2orf92 (ENSMMUG00000051706) #30	ACTR1B (ENSMMUG00000009732) #31	ENSMMUG00000054867	COX5B (ENSMMUG00000050877) #32	FAM178B (ENSMMUG00000045714) #33	SEMA4C (ENSMMUG00000007596) #35
Crab-eating macaque	MODERN SPECIES	4	ENSMFAG00000057183	AFF3 (ENSMFAG00000031640)	ENSMFAG00000030155	REV1 (ENSMFAG00000043534)	EIF5B (ENSMFAG00000038108)	TXNDC9 (ENSMFAG00000032607)	LYG1 (ENSMFAG00000031984)	LYG2 (ENSMFAG00000031272)	MRPL30 (ENSMFAG00000001729)	MITD1 (ENSMFAG00000000680)	LIPT1 (ENSMFAG00000008385)	C2orf15 (ENSMFAG00000039660)	ENSMFAG00000063995	TSGA10 (ENSMFAG00000042958) #20	ENSMFAG00000064512	MGAT4A (ENSMFAG00000044000) #22	ENSMFAG00000021158	UNC50 (ENSMFAG00000037959) #23	COA5 (ENSMFAG00000002795) #24	INPP4A (ENSMFAG00000032305) #25	CNGA3 (ENSMFAG00000003258) #26	VWA3B (ENSMFAG00000042363) #27	TMEM131 (ENSMFAG00000041529) #28	ZAP70 (ENSMFAG00000038123) #29	C2orf92 (ENSMFAG00000042666) #30	COX5B (ENSMFAG00000053533) #32	ACTR1B (ENSMFAG00000028601) #31	FAM178B (ENSMFAG00000001533) #33	ENSMFAG00000044752	SEMA4C (ENSMFAG00000045666) #35	ANKRD39 (ENSMFAG00000001711) #36
Cercopithecinae_b	ANCESTRAL SPECIES	40	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00390000018085.a.a.b.f.b.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553.g #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Olive baboon	MODERN SPECIES	5	NMS (ENSPANG00000024717)	CHST10 (ENSPANG00000019542)	LONRF2 (ENSPANG00000016950)	AFF3 (ENSPANG00000018693)	ENSPANG00000041432	REV1 (ENSPANG00000012694)	EIF5B (ENSPANG00000021269)	TXNDC9 (ENSPANG00000020436)	LYG1 (ENSPANG00000034216)	LYG2 (ENSPANG00000022686)	MRPL30 (ENSPANG00000033489)	MITD1 (ENSPANG00000016224)	LIPT1 (ENSPANG00000007442)	TSGA10 (ENSPANG00000011794) #20	CRACDL (ENSPANG00000039019) #21	MGAT4A (ENSPANG00000012837) #22	UNC50 (ENSPANG00000035529) #23	COA5 (ENSPANG00000024384) #24	INPP4A (ENSPANG00000000829) #25	CNGA3 (ENSPANG00000015022) #26	VWA3B (ENSPANG00000021271) #27	TMEM131 (ENSPANG00000010035) #28	ZAP70 (ENSPANG00000005424) #29	C2orf92 (ENSPANG00000029524) #30	ACTR1B (ENSPANG00000005064) #31	ENSPANG00000023382 #32	FAM178B (ENSPANG00000021272) #33	ENSPANG00000048502 #28	SEMA4C (ENSPANG00000009098) #35	ANKRD39 (ENSPANG00000006852) #36	ANKRD23 (ENSPANG00000025528) #37
Cercopithecinae_d	ANCESTRAL SPECIES	74	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00390000018085.a.a.b.f.b.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553.g #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00910000147690	ENSGT00980000199863	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.lb #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958
Drill	MODERN SPECIES	1637	CHST10 (ENSMLEG00000043847)	LONRF2 (ENSMLEG00000042790)	AFF3 (ENSMLEG00000041792)	ENSMLEG00000015560	REV1 (ENSMLEG00000037720)	EIF5B (ENSMLEG00000031596)	TXNDC9 (ENSMLEG00000039121)	LYG1 (ENSMLEG00000043133)	LYG2 (ENSMLEG00000041776)	MRPL30 (ENSMLEG00000027758)	MITD1 (ENSMLEG00000028528)	LIPT1 (ENSMLEG00000020853)	C2orf15 (ENSMLEG00000005705)	TSGA10 (ENSMLEG00000033715) #20	CRACDL (ENSMLEG00000004466) #21	MGAT4A (ENSMLEG00000038943) #22	ENSMLEG00000029902 #23	ENSMLEG00000012294	INPP4A (ENSMLEG00000027283) #25	CNGA3 (ENSMLEG00000010860) #26	VWA3B (ENSMLEG00000043461) #27	TMEM131 (ENSMLEG00000038300) #28	ENSMLEG00000042776	ENSMLEG00000013697	ZAP70 (ENSMLEG00000000075) #29	C2orf92 (ENSMLEG00000037280) #30	ACTR1B (ENSMLEG00000040229) #31	ENSMLEG00000029521 #32	FAM178B (ENSMLEG00000032930) #33	SEMA4C (ENSMLEG00000039692) #35	ENSMLEG00000038140
Sooty mangabey	MODERN SPECIES	622	CHST10 (ENSCATG00000036687)	LONRF2 (ENSCATG00000030877)	AFF3 (ENSCATG00000045196)	ENSCATG00000040341	REV1 (ENSCATG00000043738)	EIF5B (ENSCATG00000038292)	TXNDC9 (ENSCATG00000017979)	LYG1 (ENSCATG00000037959)	LYG2 (ENSCATG00000037862)	MRPL30 (ENSCATG00000041078)	MITD1 (ENSCATG00000043023)	LIPT1 (ENSCATG00000004198)	C2orf15 (ENSCATG00000029657)	TSGA10 (ENSCATG00000042296) #20	CRACDL (ENSCATG00000035225) #21	MGAT4A (ENSCATG00000031321) #22	ENSCATG00000040915 #23	COA5 (ENSCATG00000018888) #24	INPP4A (ENSCATG00000044744) #25	CNGA3 (ENSCATG00000014413) #26	VWA3B (ENSCATG00000029878) #27	TMEM131 (ENSCATG00000030127) #28	ENSCATG00000043900	ENSCATG00000035448	ZAP70 (ENSCATG00000038344) #29	C2orf92 (ENSCATG00000041108) #30	ACTR1B (ENSCATG00000041279) #31	ENSCATG00000042242 #32	FAM178B (ENSCATG00000034596) #33	SEMA4C (ENSCATG00000038598) #35	ENSCATG00000044677
Rhinopithecus	ANCESTRAL SPECIES	107															ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.ib #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Black snub-nosed monkey	MODERN SPECIES	391															CRACDL (ENSRBIG00000029106) #21	MGAT4A (ENSRBIG00000044103) #22	UNC50 (ENSRBIG00000041304) #23	COA5 (ENSRBIG00000007429) #24	INPP4A (ENSRBIG00000027763) #25	CNGA3 (ENSRBIG00000041308) #26	VWA3B (ENSRBIG00000027767) #27	TMEM131 (ENSRBIG00000044841) #28	ENSRBIG00000029922	ZAP70 (ENSRBIG00000037358) #29	C2orf92 (ENSRBIG00000025636) #30	ACTR1B (ENSRBIG00000030796) #31	ENSRBIG00000012979 #32	FAM178B (ENSRBIG00000039401) #33	SEMA4C (ENSRBIG00000033053) #35	ENSRBIG00000043107	ANKRD39 (ENSRBIG00000039298) #36
Golden snub-nosed monkey	MODERN SPECIES	1009															CRACDL (ENSRROG00000028342) #21	MGAT4A (ENSRROG00000041236) #22	UNC50 (ENSRROG00000037490) #23	COA5 (ENSRROG00000026950) #24	INPP4A (ENSRROG00000044342) #25	CNGA3 (ENSRROG00000029270) #26	VWA3B (ENSRROG00000007080) #27	TMEM131 (ENSRROG00000007084) #28	ENSRROG00000042694	ZAP70 (ENSRROG00000040955) #29	C2orf92 (ENSRROG00000027674) #30	ACTR1B (ENSRROG00000032053) #31	ENSRROG00000007661 #32	FAM178B (ENSRROG00000044852) #33	SEMA4C (ENSRROG00000000938) #35	ENSRROG00000035765	ANKRD39 (ENSRROG00000011626) #36
Platyrrhini	ANCESTRAL SPECIES	13	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000012981.jb.b.b	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00950000184459	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Mas night monkey	MODERN SPECIES	569	AFF3 (ENSANAG00000030084)	ENSANAG00000025370	REV1 (ENSANAG00000028619)	EIF5B (ENSANAG00000017300)	TXNDC9 (ENSANAG00000035961)	LYG1 (ENSANAG00000024131)	ENSANAG00000024618	LYG2 (ENSANAG00000001618)	ENSANAG00000022587	MRPL30 (ENSANAG00000028266)	MITD1 (ENSANAG00000032257)	LIPT1 (ENSANAG00000019344)	ENSANAG00000024955	TSGA10 (ENSANAG00000028894) #20	CRACDL (ENSANAG00000025680) #21	MGAT4A (ENSANAG00000020989) #22	UNC50 (ENSANAG00000034976) #23	COA5 (ENSANAG00000024726) #24	INPP4A (ENSANAG00000026244) #25	CNGA3 (ENSANAG00000037947) #26	ENSANAG00000027695	ENSANAG00000029492	ENSANAG00000024685 #27
Cebidae	ANCESTRAL SPECIES	15	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000012981.jb.b.b	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00950000184459	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Marmoset	MODERN SPECIES	5	REV1 (ENSCJAG00000010048)	EIF5B (ENSCJAG00000009960)	TXNDC9 (ENSCJAG00000009936)	ENSCJAG00000071956	ENSCJAG00000084584	LYG1 (ENSCJAG00000007070)	LYG2 (ENSCJAG00000007074)	MRPL30 (ENSCJAG00000007085)	MITD1 (ENSCJAG00000007090)	LIPT1 (ENSCJAG00000007099)	C2orf15 (ENSCJAG00000083068)	TSGA10 (ENSCJAG00000011456) #20	ENSCJAG00000085437	CRACDL (ENSCJAG00000072755) #21	ENSCJAG00000073642	MGAT4A (ENSCJAG00000007102) #22	UNC50 (ENSCJAG00000007132) #23	COA5 (ENSCJAG00000069683) #24	INPP4A (ENSCJAG00000007145) #25	CNGA3 (ENSCJAG00000007236) #26	ENSCJAG00000069982	ENSCJAG00000086241	VWA3B (ENSCJAG00000011401) #27	ENSCJAG00000075871	TMEM131 (ENSCJAG00000011421) #28	ZAP70 (ENSCJAG00000011481) #29	ACTR1B (ENSCJAG00000016919) #31	COX5B (ENSCJAG00000016911) #32	ENSCJAG00000079690	ENSCJAG00000054202	FAM178B (ENSCJAG00000008050) #33
Cebidae_a	ANCESTRAL SPECIES	56	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000012981.jb.b.b	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00950000184459	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Bolivian squirrel monkey	MODERN SPECIES	185	CHST10 (ENSSBOG00000021780)	ENSSBOG00000021970	LONRF2 (ENSSBOG00000020062)	AFF3 (ENSSBOG00000026667)	REV1 (ENSSBOG00000035983)	EIF5B (ENSSBOG00000033578)	TXNDC9 (ENSSBOG00000026736)	LYG1 (ENSSBOG00000033713)	LYG2 (ENSSBOG00000031522)	ENSSBOG00000022137	MITD1 (ENSSBOG00000029149)	LIPT1 (ENSSBOG00000021721)	C2orf15 (ENSSBOG00000023217)	TSGA10 (ENSSBOG00000025023) #20	CRACDL (ENSSBOG00000018898) #21	MGAT4A (ENSSBOG00000030443) #22	UNC50 (ENSSBOG00000023868) #23	COA5 (ENSSBOG00000028493) #24	INPP4A (ENSSBOG00000036160) #25	CNGA3 (ENSSBOG00000031010) #26	ENSSBOG00000012954	ENSSBOG00000034489	VWA3B (ENSSBOG00000021046) #27	ENSSBOG00000036101	TMEM131 (ENSSBOG00000029185) #28	ZAP70 (ENSSBOG00000035123) #29	ENSSBOG00000029222	C2orf92 (ENSSBOG00000028073) #30	ACTR1B (ENSSBOG00000027157) #31	COX5B (ENSSBOG00000023040) #32	ENSSBOG00000032560
Capuchin	MODERN SPECIES	31	ENSCCAG00000023107	ENSCCAG00000030115	PROKR2 (ENSCCAG00000037325)	ENSCCAG00000032595	CDS2 (ENSCCAG00000026795)	PCNA (ENSCCAG00000037224)	ENSCCAG00000028801	ENSCCAG00000019801	SLC23A2 (ENSCCAG00000027857)	RASSF2 (ENSCCAG00000034388)	MITD1 (ENSCCAG00000031759)	LIPT1 (ENSCCAG00000018953)	TSGA10 (ENSCCAG00000029564) #20	C2orf15 (ENSCCAG00000027023)	CRACDL (ENSCCAG00000029992) #21	MGAT4A (ENSCCAG00000025882) #22	UNC50 (ENSCCAG00000028599) #23	COA5 (ENSCCAG00000031470) #24	INPP4A (ENSCCAG00000032743) #25	CNGA3 (ENSCCAG00000036994) #26	ENSCCAG00000035629	ENSCCAG00000024189	ENSCCAG00000001577	VWA3B (ENSCCAG00000004961) #27	TMEM131 (ENSCCAG00000025868) #28	ZAP70 (ENSCCAG00000028856) #29	ENSCCAG00000029983	ACTR1B (ENSCCAG00000023158) #31	COX5B (ENSCCAG00000036004) #32	ENSCCAG00000032481	FAM178B (ENSCCAG00000036030) #33
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36
Tree shrew	MODERN SPECIES	4925																MGAT4A (ENSTBEG00000016986) #22	UNC50 (ENSTBEG00000016811) #23	ENSTBEG00000016684	INPP4A (ENSTBEG00000015616) #25
Glires	ANCESTRAL SPECIES	13	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36
Lagomorpha	ANCESTRAL SPECIES	31	ENSGT00940000160744	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000156317
Rabbit	MODERN SPECIES	11	AFF3 (ENSOCUG00000009532)	ENSOCUG00000035054	REV1 (ENSOCUG00000014576)	EIF5B (ENSOCUG00000021154)	ENSOCUG00000037238	ENSOCUG00000016129	LYG1 (ENSOCUG00000014720)	LYG2 (ENSOCUG00000004116)	MRPL30 (ENSOCUG00000004111)	MITD1 (ENSOCUG00000004104)	LIPT1 (ENSOCUG00000023173)	TSGA10 (ENSOCUG00000006987) #20	ENSOCUG00000030840	CRACDL (ENSOCUG00000009514) #21	ENSOCUG00000039365	MGAT4A (ENSOCUG00000003383) #22	INPP4A (ENSOCUG00000003365) #25	COA5 (ENSOCUG00000034256) #24	CNGA3 (ENSOCUG00000003353) #26	ENSOCUG00000030192 #27	ENSOCUG00000008835 #27	TMEM131 (ENSOCUG00000014284) #28	ZAP70 (ENSOCUG00000005819) #29	C2orf92 (ENSOCUG00000032996) #30	ACTR1B (ENSOCUG00000005975) #31	COX5B (ENSOCUG00000017085) #32	ENSOCUG00000028202 #33	SEMA4C (ENSOCUG00000003347) #35	ANKRD39 (ENSOCUG00000024245) #36	ANKRD23 (ENSOCUG00000009100) #37	CNNM4 (ENSOCUG00000003328)
Pika	MODERN SPECIES	2686															CRACDL (ENSOPRG00000003029) #21	MGAT4A (ENSOPRG00000002990) #22	UNC50 (ENSOPRG00000002982) #23	ENSOPRG00000002972 #24	INPP4A (ENSOPRG00000002915) #25
Rodentia	ANCESTRAL SPECIES	15	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36
Rodentia_B	ANCESTRAL SPECIES	36	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36
Kangaroo rat	MODERN SPECIES	366	Pdcl3 (ENSDORG00000012397)	Chst10 (ENSDORG00000014722)	Lonrf2 (ENSDORG00000014508)	Aff3 (ENSDORG00000007294)	Rev1 (ENSDORG00000013563)	ENSDORG00000027717	Txndc9 (ENSDORG00000013557)	Lyg1 (ENSDORG00000006377)	Lyg2 (ENSDORG00000009778)	Mrpl30 (ENSDORG00000010734)	ENSDORG00000023891	Lipt1 (ENSDORG00000023978)	ENSDORG00000026437 #20	ENSDORG00000002000 #20	ENSDORG00000027541	Mgat4a (ENSDORG00000010425) #22	Unc50 (ENSDORG00000010423) #23	Coa5 (ENSDORG00000029673) #24	Inpp4a (ENSDORG00000007696) #25	Cnga3 (ENSDORG00000009326) #26	ENSDORG00000025828 #27	ENSDORG00000024140 #27	ENSDORG00000024065 #28	ENSDORG00000028952 #28	ENSDORG00000025956 #28	Zap70 (ENSDORG00000006917) #29	ENSDORG00000028365 #30	Actr1b (ENSDORG00000014995) #31	ENSDORG00000014994 #32	Fam178b (ENSDORG00000029537) #33	Sema4c (ENSDORG00000016117) #35
Myomorpha	ANCESTRAL SPECIES	40	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36
Lesser Egyptian jerboa	MODERN SPECIES	177	Zc3h6 (ENSJJAG00000013206)	ENSJJAG00000022170	Zc3h8 (ENSJJAG00000002355)	Aff3 (ENSJJAG00000013155)	Rev1 (ENSJJAG00000015493)	ENSJJAG00000016442	Txndc9 (ENSJJAG00000021906)	Lyg1 (ENSJJAG00000001060)	Lyg2 (ENSJJAG00000005225)	Mrpl30 (ENSJJAG00000006196)	Mitd1 (ENSJJAG00000016293)	Lipt1 (ENSJJAG00000019653)	Tsga10 (ENSJJAG00000020604) #20	ENSJJAG00000020843	ENSJJAG00000021227	Mgat4a (ENSJJAG00000021763) #22	ENSJJAG00000012733	Unc50 (ENSJJAG00000005939) #23	ENSJJAG00000006287 #24	Inpp4a (ENSJJAG00000011925) #25	Cnga3 (ENSJJAG00000015880) #26	ENSJJAG00000021500 #27	ENSJJAG00000021623 #28	ENSJJAG00000012883	ENSJJAG00000021826 #28	ENSJJAG00000022047 #28	Zap70 (ENSJJAG00000022452) #29	ENSJJAG00000022674 #30	ENSJJAG00000015808	Actr1b (ENSJJAG00000016464) #31	ENSJJAG00000016946 #32
Muroidea	ANCESTRAL SPECIES	45	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1304	Aff3 (ENSNGAG00000002408)	ENSNGAG00000016613	ENSNGAG00000004780	Rev1 (ENSNGAG00000000404)	ENSNGAG00000015148	Txndc9 (ENSNGAG00000003342)	Lyg1 (ENSNGAG00000020275)	Lyg2 (ENSNGAG00000005086)	Mrpl30 (ENSNGAG00000020323)	Mitd1 (ENSNGAG00000017378)	Lipt1 (ENSNGAG00000014518)	ENSNGAG00000013374	ENSNGAG00000020361 #20	ENSNGAG00000018981 #20	Cracdl (ENSNGAG00000010889) #21	Mgat4a (ENSNGAG00000010602) #22	Unc50 (ENSNGAG00000000100) #23	Coa5 (ENSNGAG00000000025) #24	Inpp4a (ENSNGAG00000021027) #25	Cnga3 (ENSNGAG00000020129) #26
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36
Murinae	ANCESTRAL SPECIES	9	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769.hb	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.ab #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Mus	ANCESTRAL SPECIES	5	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769.hb	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.ab.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769.hb.a	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.ab.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Mus_B	ANCESTRAL SPECIES	21	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769.hb.a	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.ab.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769.hb.a	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.ab.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Steppe mouse	MODERN SPECIES	2673					Rev1 (ENSMSIG00000006752)	Eif5b (ENSMSIG00000006686)	Txndc9 (ENSMSIG00000006615)	Lyg1 (ENSMSIG00000006590)	Lyg2 (ENSMSIG00000006563)	ENSMSIG00000006547	Mitd1 (ENSMSIG00000006490)	Lipt1 (ENSMSIG00000006485)	ENSMSIG00000006466	Tsga10 (ENSMSIG00000006225) #20	Cracdl (ENSMSIG00000006095) #21	Mgat4a (ENSMSIG00000005888) #22	Unc50 (ENSMSIG00000005835) #23	Coa5 (ENSMSIG00000005818) #24	Inpp4a (ENSMSIG00000003009) #25	Cnga3 (ENSMSIG00000002849) #26
spretus	MODERN SPECIES		Pdcl3 (MGP_SPRETEiJ_G0014871)	Nms (MGP_SPRETEiJ_G0014870)	Chst10 (MGP_SPRETEiJ_G0014869)	Lonrf2 (MGP_SPRETEiJ_G0014868)	Aff3 (MGP_SPRETEiJ_G0014867)	Rev1 (MGP_SPRETEiJ_G0014866)	Eif5b (MGP_SPRETEiJ_G0014865)	Txndc9 (MGP_SPRETEiJ_G0014864)	Lyg1 (MGP_SPRETEiJ_G0014863)	Lyg2 (MGP_SPRETEiJ_G0014862)	Mrpl30 (MGP_SPRETEiJ_G0014861)	Mitd1 (MGP_SPRETEiJ_G0014860)	Lipt1 (MGP_SPRETEiJ_G0014859)	MGP_SPRETEiJ_G0014858 #20	Cracdl (MGP_SPRETEiJ_G0014857) #21	Mgat4a (MGP_SPRETEiJ_G0014856) #22	Unc50 (MGP_SPRETEiJ_G0014855) #23	Inpp4a (MGP_SPRETEiJ_G0014853) #25	Cnga3 (MGP_SPRETEiJ_G0014852) #26	MGP_SPRETEiJ_G0014851 #27	Tmem131 (MGP_SPRETEiJ_G0014850) #28	Zap70 (MGP_SPRETEiJ_G0014849) #29	MGP_SPRETEiJ_G0014848 #32	Actr1b (MGP_SPRETEiJ_G0014847) #31	Fam178b (MGP_SPRETEiJ_G0014846) #33	Sema4c (MGP_SPRETEiJ_G0014845) #35	MGP_SPRETEiJ_G0014844 #36	Ankrd23 (MGP_SPRETEiJ_G0014843) #37	Cnnm3 (MGP_SPRETEiJ_G0014842)	Cnnm4 (MGP_SPRETEiJ_G0014841)	Lman2l (MGP_SPRETEiJ_G0014840)
Mouse	MODERN SPECIES		Pdcl3 (ENSMUSG00000026078)	Nms (ENSMUSG00000067604)	Chst10 (ENSMUSG00000026080)	Lonrf2 (ENSMUSG00000048814)	Aff3 (ENSMUSG00000037138)	Rev1 (ENSMUSG00000026082)	Eif5b (ENSMUSG00000026083)	Txndc9 (ENSMUSG00000058407)	Lyg1 (ENSMUSG00000026085)	Lyg2 (ENSMUSG00000061584)	Mrpl30 (ENSMUSG00000026087)	Mitd1 (ENSMUSG00000026088)	Lipt1 (ENSMUSG00000037216)	Tsga10 (ENSMUSG00000060771) #20	Cracdl (ENSMUSG00000026090) #21	Mgat4a (ENSMUSG00000026110) #22	Unc50 (ENSMUSG00000026111) #23	Coa5 (ENSMUSG00000026112) #24	Inpp4a (ENSMUSG00000026113) #25	Cnga3 (ENSMUSG00000026114) #26	Vwa3b (ENSMUSG00000050122) #27	Tmem131 (ENSMUSG00000026116) #28	Zap70 (ENSMUSG00000026117) #29	4933424G06Rik (ENSMUSG00000102416) #30	Actr1b (ENSMUSG00000037351) #31	Cox5b (ENSMUSG00000061518) #32	Fam178b (ENSMUSG00000046337) #33	Sema4c (ENSMUSG00000026121) #35	Ankrd39 (ENSMUSG00000079610) #36	Gm42417 (ENSMUSG00000109510)	Ankrd23 (ENSMUSG00000067653) #37
Ryukyu mouse	MODERN SPECIES		Pdcl3 (MGP_CAROLIEiJ_G0014067)	Nms (MGP_CAROLIEiJ_G0014066)	MGP_CAROLIEiJ_G0014065	MGP_CAROLIEiJ_G0014064	Aff3 (MGP_CAROLIEiJ_G0014063)	Rev1 (MGP_CAROLIEiJ_G0014062)	Eif5b (MGP_CAROLIEiJ_G0014061)	Txndc9 (MGP_CAROLIEiJ_G0014060)	Lyg1 (MGP_CAROLIEiJ_G0014059)	Lyg2 (MGP_CAROLIEiJ_G0014058)	Mrpl30 (MGP_CAROLIEiJ_G0014057)	Mitd1 (MGP_CAROLIEiJ_G0014056)	Lipt1 (MGP_CAROLIEiJ_G0014055)	MGP_CAROLIEiJ_G0014054 #20	Cracdl (MGP_CAROLIEiJ_G0014053) #21	Mgat4a (MGP_CAROLIEiJ_G0014052) #22	Unc50 (MGP_CAROLIEiJ_G0014051) #23	Coa5 (MGP_CAROLIEiJ_G0014050) #24	Inpp4a (MGP_CAROLIEiJ_G0014049) #25	Cnga3 (MGP_CAROLIEiJ_G0014048) #26	MGP_CAROLIEiJ_G0014047 #27	Tmem131 (MGP_CAROLIEiJ_G0014046) #28	Zap70 (MGP_CAROLIEiJ_G0014045) #29	Actr1b (MGP_CAROLIEiJ_G0014044) #31	MGP_CAROLIEiJ_G0014043 #32	Fam178b (MGP_CAROLIEiJ_G0014042) #33	Sema4c (MGP_CAROLIEiJ_G0014041) #35	MGP_CAROLIEiJ_G0014040 #36	Ankrd23 (MGP_CAROLIEiJ_G0014039) #37	Cnnm3 (MGP_CAROLIEiJ_G0014038)	Cnnm4 (MGP_CAROLIEiJ_G0014037)
Shrew mouse	MODERN SPECIES	18	Pdcl3 (MGP_PahariEiJ_G0027314)	Nms (MGP_PahariEiJ_G0027313)	Chst10 (MGP_PahariEiJ_G0027312)	Lonrf2 (MGP_PahariEiJ_G0027311)	Aff3 (MGP_PahariEiJ_G0027310)	Rev1 (MGP_PahariEiJ_G0027309)	Eif5b (MGP_PahariEiJ_G0027308)	Txndc9 (MGP_PahariEiJ_G0027307)	Lyg1 (MGP_PahariEiJ_G0027306)	Lyg2 (MGP_PahariEiJ_G0027304)	Mrpl30 (MGP_PahariEiJ_G0027303)	Mitd1 (MGP_PahariEiJ_G0027302)	Lipt1 (MGP_PahariEiJ_G0027301)	MGP_PahariEiJ_G0027300 #20	Cracdl (MGP_PahariEiJ_G0027299) #21	Mgat4a (MGP_PahariEiJ_G0027298) #22	Unc50 (MGP_PahariEiJ_G0027297) #23	Coa5 (MGP_PahariEiJ_G0027296) #24	Inpp4a (MGP_PahariEiJ_G0027295) #25	Cnga3 (MGP_PahariEiJ_G0027294) #26	MGP_PahariEiJ_G0027293 #27	Tmem131 (MGP_PahariEiJ_G0027292) #28	Zap70 (MGP_PahariEiJ_G0027291) #29	Actr1b (MGP_PahariEiJ_G0027290) #31	Cox5b-ps (MGP_PahariEiJ_G0027289) #32	Fam178b (MGP_PahariEiJ_G0027288) #33	Sema4c (MGP_PahariEiJ_G0027287) #35	MGP_PahariEiJ_G0027286 #36	Ankrd23 (MGP_PahariEiJ_G0027285) #37	Cnnm3 (MGP_PahariEiJ_G0027284)	Cnnm4 (MGP_PahariEiJ_G0027283)
Rat	DUPLICATION
Rat	MODERN SPECIES	19	NMS (ENSRNOG00000038979)	Chst10 (ENSRNOG00000012815)	Lonrf2 (ENSRNOG00000023312)	Aff3 (ENSRNOG00000018830)	Rev1 (ENSRNOG00000018623)	Eif5b (ENSRNOG00000023356)	Txndc9 (ENSRNOG00000063081)	Txndc9 (ENSRNOG00000018593)	Lyg1 (ENSRNOG00000047233)	Lyg2 (ENSRNOG00000050591)	Mrpl30 (ENSRNOG00000049330)	Mitd1 (ENSRNOG00000018467)	Lipt1 (ENSRNOG00000018464)	Tsga10 (ENSRNOG00000058681) #20	Cracdl (ENSRNOG00000018366) #21	Mgat4a (ENSRNOG00000018276) #22	Unc50 (ENSRNOG00000018128) #23	ENSRNOG00000064457 #24	AC133270.1 (ENSRNOG00000031651)	Inpp4a (ENSRNOG00000017660) #25	Cnga3 (ENSRNOG00000051950) #26	Vwa3b (ENSRNOG00000023566) #27	Tmem131 (ENSRNOG00000017265) #28	Zap70 (ENSRNOG00000016995) #29	LOC100909859 (ENSRNOG00000052570) #30	Actr1b (ENSRNOG00000016789) #31	Cox5b (ENSRNOG00000016660) #32	Fam178b (ENSRNOG00000023941) #33	Sema4c (ENSRNOG00000016254) #35	Ankrd39 (ENSRNOG00000064008) #36	Ankrd23 (ENSRNOG00000016151) #37
Rat	MODERN SPECIES		Mphosph10 (ENSRNOG00000016266)	Fan1 (ENSRNOG00000023985)	Mtmr10 (ENSRNOG00000016090)	Trpm1 (ENSRNOG00000015829)	ENSRNOG00000064709	Klf13 (ENSRNOG00000015822)	LOC120097335 (ENSRNOG00000065214)	Otud7a (ENSRNOG00000015503)	Chrna7 (ENSRNOG00000010853)	LOC102548067 (ENSRNOG00000051782)	ENSRNOG00000066862	Peg12 (ENSRNOG00000024429)	Mkrn3 (ENSRNOG00000010172)	Magel2 (ENSRNOG00000010158)	Ndn (ENSRNOG00000010146)	ENSRNOG00000069701 #22	ENSRNOG00000063232	AC080157.1 (ENSRNOG00000058277)	ENSRNOG00000069377	Snrpn (ENSRNOG00000054391)	Ube3a (ENSRNOG00000015734)	Atp10a (ENSRNOG00000056228)	ENSRNOG00000066632	Gabrb3 (ENSRNOG00000060599)	Gabra5 (ENSRNOG00000010803)	Gabrg3 (ENSRNOG00000014862)	Oca2 (ENSRNOG00000014465)	Herc2 (ENSRNOG00000013718)	Nipa1 (ENSRNOG00000042702)	Nipa2 (ENSRNOG00000012690)	Cyfip1 (ENSRNOG00000011945)
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36
Cricetinae	ANCESTRAL SPECIES	28	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645.g	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Golden Hamster	MODERN SPECIES	671	ENSMAUG00000002348	Chst10 (ENSMAUG00000000525)	ENSMAUG00000012235	ENSMAUG00000004398	ENSMAUG00000013003	Rev1 (ENSMAUG00000019944)	ENSMAUG00000016089	Txndc9 (ENSMAUG00000013397)	Lyg1 (ENSMAUG00000007748)	Lyg2 (ENSMAUG00000018306)	ENSMAUG00000021333	Mitd1 (ENSMAUG00000013775)	Lipt1 (ENSMAUG00000015491)	Tsga10 (ENSMAUG00000002811) #20	Cracdl (ENSMAUG00000020391) #21	ENSMAUG00000020958 #22	Unc50 (ENSMAUG00000002638) #23	Coa5 (ENSMAUG00000013981) #24	Inpp4a (ENSMAUG00000011650) #25	Cnga3 (ENSMAUG00000015747) #26	ENSMAUG00000013124 #27	ENSMAUG00000009595 #27	ENSMAUG00000001449 #28	ENSMAUG00000009084 #28	Zap70 (ENSMAUG00000019088) #29	ENSMAUG00000008540 #30	Actr1b (ENSMAUG00000020362) #31	ENSMAUG00000017662 #32	Fam178b (ENSMAUG00000013613) #33	Sema4c (ENSMAUG00000012863) #35	Ankrd39 (ENSMAUG00000008102) #36
Chinese hamster chok1gshd	MODERN SPECIES	165	Pdcl3 (ENSCGRG00001016908)	Nms (ENSCGRG00001019460)	Chst10 (ENSCGRG00001023533)	Lonrf2 (ENSCGRG00001006964)	Aff3 (ENSCGRG00001014566)	Rev1 (ENSCGRG00001019272)	Eif5b (ENSCGRG00001010937)	ENSCGRG00001009957	Lyg1 (ENSCGRG00001021875)	Lyg2 (ENSCGRG00001000288)	Mrpl30 (ENSCGRG00001006119)	Mitd1 (ENSCGRG00001009600)	Lipt1 (ENSCGRG00001002192)	Tsga10 (ENSCGRG00001017211) #20	Cracdl (ENSCGRG00001019181) #21	Mgat4a (ENSCGRG00001021622) #22	Unc50 (ENSCGRG00001013870) #23	Coa5 (ENSCGRG00001020671) #24	Inpp4a (ENSCGRG00001002899) #25	Cnga3 (ENSCGRG00001019459) #26	ENSCGRG00001023547 #27	ENSCGRG00001002382 #27	Tmem131 (ENSCGRG00001015747) #28	Zap70 (ENSCGRG00001014962) #29	4933424G06Rik (ENSCGRG00001021770) #30	Actr1b (ENSCGRG00001024108) #31	ENSCGRG00001011246 #32	Fam178b (ENSCGRG00001009754) #33	Sema4c (ENSCGRG00001024462) #35	Ankrd39 (ENSCGRG00001009977) #36	Ankrd23 (ENSCGRG00001019286) #37
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00910000147550	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36
Prairie vole	MODERN SPECIES	352	Chst10 (ENSMOCG00000016355)	Lonrf2 (ENSMOCG00000017896)	ENSMOCG00000005572	ENSMOCG00000005082	ENSMOCG00000017401	ENSMOCG00000015713	Txndc9 (ENSMOCG00000009394)	Lyg1 (ENSMOCG00000013025)	Lyg2 (ENSMOCG00000022777)	Mrpl30 (ENSMOCG00000005615)	Mitd1 (ENSMOCG00000014690)	Lipt1 (ENSMOCG00000013610)	Tsga10 (ENSMOCG00000010193) #20	Cracdl (ENSMOCG00000021066) #21	ENSMOCG00000001809	Mgat4a (ENSMOCG00000021486) #22	Unc50 (ENSMOCG00000021053) #23	Coa5 (ENSMOCG00000015803) #24	Inpp4a (ENSMOCG00000013144) #25	Cnga3 (ENSMOCG00000004896) #26	ENSMOCG00000020113 #27	ENSMOCG00000015171 #27	ENSMOCG00000022519 #28	ENSMOCG00000020583 #28	ENSMOCG00000008771 #28	Zap70 (ENSMOCG00000004633) #29	4933424G06Rik (ENSMOCG00000012250) #30	Actr1b (ENSMOCG00000020042) #31	ENSMOCG00000013191 #32	Fam178b (ENSMOCG00000011783) #33	Sema4c (ENSMOCG00000014681) #35
Northern American deer mouse	MODERN SPECIES	13	Pdcl3 (ENSPEMG00000013451)	Nms (ENSPEMG00000019828)	Chst10 (ENSPEMG00000025090)	Lonrf2 (ENSPEMG00000020083)	Aff3 (ENSPEMG00000014802)	Rev1 (ENSPEMG00000001449)	Eif5b (ENSPEMG00000030389)	Txndc9 (ENSPEMG00000014087)	Lyg1 (ENSPEMG00000015243)	Lyg2 (ENSPEMG00000018488)	ENSPEMG00000018330	Mitd1 (ENSPEMG00000000488)	Lipt1 (ENSPEMG00000000702)	Tsga10 (ENSPEMG00000008524) #20	Cracdl (ENSPEMG00000019576) #21	Mgat4a (ENSPEMG00000019714) #22	Unc50 (ENSPEMG00000019768) #23	Coa5 (ENSPEMG00000026781) #24	Inpp4a (ENSPEMG00000020196) #25	Cnga3 (ENSPEMG00000016861) #26	ENSPEMG00000000986 #27	ENSPEMG00000030612 #27	ENSPEMG00000019582	Tmem131 (ENSPEMG00000017509) #28	ENSPEMG00000025519	Zap70 (ENSPEMG00000007952) #29	4933424G06Rik (ENSPEMG00000011441) #30	Actr1b (ENSPEMG00000007093) #31	ENSPEMG00000018048 #32	Fam178b (ENSPEMG00000012861) #33	Sema4c (ENSPEMG00000016803) #35
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Sciuridae	ANCESTRAL SPECIES	44	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Marmotini	ANCESTRAL SPECIES	56	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b.u.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Alpin marmot	MODERN SPECIES	63	NMS (ENSMMMG00000019722)	ENSMMMG00000019729	LONRF2 (ENSMMMG00000019738)	REV1 (ENSMMMG00000019766)	EIF5B (ENSMMMG00000019788)	TXNDC9 (ENSMMMG00000019802)	LYG1 (ENSMMMG00000019812)	LYG2 (ENSMMMG00000019818)	MRPL30 (ENSMMMG00000019824)	MITD1 (ENSMMMG00000019829)	ENSMMMG00000019835	ENSMMMG00000019842	C2orf15 (ENSMMMG00000019847)	TSGA10 (ENSMMMG00000019851) #20	CRACDL (ENSMMMG00000019927) #21	MGAT4A (ENSMMMG00000019965) #22	UNC50 (ENSMMMG00000020009) #23	COA5 (ENSMMMG00000020013) #24	INPP4A (ENSMMMG00000020026) #25	ENSMMMG00000020838	CNGA3 (ENSMMMG00000020843) #26	ENSMMMG00000020874 #27	ENSMMMG00000020908	TMEM131 (ENSMMMG00000020924) #28	ZAP70 (ENSMMMG00000021644) #29	ACTR1B (ENSMMMG00000021656) #31	ENSMMMG00000021659 #32	FAM178B (ENSMMMG00000021663) #33	SEMA4C (ENSMMMG00000021675) #35	ANKRD39 (ENSMMMG00000021698) #36	ANKRD23 (ENSMMMG00000000053) #37
Marmotini_b	ANCESTRAL SPECIES	144																ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b.u.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102	ENSGT00940000156317
Squirrel	MODERN SPECIES	344															ENSSTOG00000027542 #20	MGAT4A (ENSSTOG00000006098) #22	UNC50 (ENSSTOG00000006076) #23	COA5 (ENSSTOG00000021056) #24	INPP4A (ENSSTOG00000026918) #25	CNGA3 (ENSSTOG00000006117) #26	TMEM131 (ENSSTOG00000015632) #28	ZAP70 (ENSSTOG00000010992) #29	ACTR1B (ENSSTOG00000010983) #31	ENSSTOG00000010980 #32	FAM178B (ENSSTOG00000027574) #33	SEMA4C (ENSSTOG00000006623) #35	ANKRD39 (ENSSTOG00000021946) #36	ANKRD23 (ENSSTOG00000025261) #37	CNNM4 (ENSSTOG00000006555)	LMAN2L (ENSSTOG00000023069)	KANSL3 (ENSSTOG00000009442)
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	5	AFF3 (ENSSVLG00005013479)	REV1 (ENSSVLG00005013194)	EIF5B (ENSSVLG00005012999)	TXNDC9 (ENSSVLG00005012897)	LYG1 (ENSSVLG00005012807)	ENSSVLG00005015116	LYG2 (ENSSVLG00005015047)	ENSSVLG00005014935	MITD1 (ENSSVLG00005014868)	LIPT1 (ENSSVLG00005014850)	ENSSVLG00005014814	C2orf15 (ENSSVLG00005014789)	TSGA10 (ENSSVLG00005014435) #20	CRACDL (ENSSVLG00005014046) #21	ENSSVLG00005013927	ENSSVLG00005013836 #22	ENSSVLG00005013734 #23	ENSSVLG00005013684 #24	INPP4A (ENSSVLG00005013494) #25	CNGA3 (ENSSVLG00005013237) #26	ENSSVLG00005013156	VWA3B (ENSSVLG00005012929) #27	TMEM131 (ENSSVLG00005012815) #28	ZAP70 (ENSSVLG00005012562) #29	ENSSVLG00005012495	ACTR1B (ENSSVLG00005012172) #31	COX5B (ENSSVLG00005012122) #32	ENSSVLG00005011994 #33	ENSSVLG00005011946 #33	SEMA4C (ENSSVLG00005011743) #35	ANKRD39 (ENSSVLG00005011694) #36
Eurasian red squirrel	MODERN SPECIES	10	UBA3 (ENSSVLG00005012414)	ARL6IP5 (ENSSVLG00005012505)	LMOD3 (ENSSVLG00005012544)	FRMD4B (ENSSVLG00005012609)	TAFA1 (ENSSVLG00005013002)	ENSSVLG00005013072	SUCLG2 (ENSSVLG00005013123)	ENSSVLG00005013244	ENSSVLG00005013309	ENSSVLG00005013369	ENSSVLG00005013464	ENSSVLG00005013547	ENSSVLG00005013626	ENSSVLG00005013669	ENSSVLG00005013708	ENSSVLG00005013731 #22	ENSSVLG00005013793	ENSSVLG00005013904	ENSSVLG00005014042	ENSSVLG00005014073	ENSSVLG00005014121	ENSSVLG00005014214	ENSSVLG00005014356	ENSSVLG00005014399	ENSSVLG00005014452	ENSSVLG00005014484	ENSSVLG00005014524	ENSSVLG00005014604	ENSSVLG00005014715	ENSSVLG00005014904	ENSSVLG00005014982
Hystricomorpha	ANCESTRAL SPECIES	8	ENSGT00940000160744	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102	ENSGT00940000156317
Naked mole-rat female	MODERN SPECIES	23	ENSHGLG00000046670	ENSHGLG00000006594	ENSHGLG00000047132	ENSHGLG00000034304	ENSHGLG00000005004	REV1 (ENSHGLG00000016395)	EIF5B (ENSHGLG00000016367)	TXNDC9 (ENSHGLG00000044145)	LYG1 (ENSHGLG00000009190)	LYG2 (ENSHGLG00000008170)	LIPT1 (ENSHGLG00000034919)	ENSHGLG00000005087	TSGA10 (ENSHGLG00000016577) #20	CRACDL (ENSHGLG00000012863) #21	ENSHGLG00000037621	MGAT4A (ENSHGLG00000007486) #22	ENSHGLG00000040049	INPP4A (ENSHGLG00000004735) #25	COA5 (ENSHGLG00000004542) #24	ENSHGLG00000018672	CNGA3 (ENSHGLG00000005466) #26	ENSHGLG00000007703 #27	ENSHGLG00000039053	ENSHGLG00000008145 #28	ENSHGLG00000006293	ENSHGLG00000041117 #28	ZAP70 (ENSHGLG00000004616) #29	ACTR1B (ENSHGLG00000009168) #31	ENSHGLG00000039593	ENSHGLG00000015481 #33	ENSHGLG00000014598 #36
Hystricomorpha_a	ANCESTRAL SPECIES	52	ENSGT00940000160744	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102	ENSGT00940000156317
Guinea pig	MODERN SPECIES	24	NELFA (ENSCPOG00000019715)	C4orf48 (ENSCPOG00000031206)	ENSCPOG00000038761	POLN (ENSCPOG00000001665)	HAUS3 (ENSCPOG00000021994)	MXD4 (ENSCPOG00000022492)	ZFYVE28 (ENSCPOG00000027392)	CFAP99 (ENSCPOG00000040209)	RNF4 (ENSCPOG00000030545)	FAM193A (ENSCPOG00000004013)	ENSCPOG00000024404	SH3BP2 (ENSCPOG00000009421)	ENSCPOG00000031940	TSGA10 (ENSCPOG00000012778) #20	ENSCPOG00000031612	MGAT4A (ENSCPOG00000013248) #22	UNC50 (ENSCPOG00000009266) #23	COA5 (ENSCPOG00000033235) #24	INPP4A (ENSCPOG00000009253) #25	CNGA3 (ENSCPOG00000021435) #26	ENSCPOG00000040253 #27	ENSCPOG00000010132 #27	TMEM131 (ENSCPOG00000004808) #28	ZAP70 (ENSCPOG00000004804) #29	ACTR1B (ENSCPOG00000033601) #31	COX5B (ENSCPOG00000002733) #32	ENSCPOG00000023082 #33	SEMA4C (ENSCPOG00000014020) #35	ANKRD39 (ENSCPOG00000024896) #36	ANKRD23 (ENSCPOG00000025270) #37	ENSCPOG00000009548
Hystricomorpha_b	ANCESTRAL SPECIES	59	ENSGT00940000160744	ENSGT00940000154295.o	ENSGT00510000049213	ENSGT00940000157128	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102	ENSGT00940000156317
Degu	MODERN SPECIES	93	ENSODEG00000007395	NMS (ENSODEG00000007962)	CHST10 (ENSODEG00000008815)	ENSODEG00000010897	ENSODEG00000007806	REV1 (ENSODEG00000008237)	ENSODEG00000008333	ENSODEG00000008190	ENSODEG00000019509	LYG1 (ENSODEG00000009277)	LYG2 (ENSODEG00000010732)	ENSODEG00000010546	LIPT1 (ENSODEG00000019699)	TSGA10 (ENSODEG00000008545) #20	ENSODEG00000007837	ENSODEG00000006992 #22	UNC50 (ENSODEG00000008280) #23	COA5 (ENSODEG00000007739) #24	INPP4A (ENSODEG00000007690) #25	CNGA3 (ENSODEG00000008323) #26	ENSODEG00000007778 #27	ENSODEG00000006920 #27	ENSODEG00000007221	ENSODEG00000006553 #28	ENSODEG00000007216 #28	ENSODEG00000008642 #28	ZAP70 (ENSODEG00000008410) #29	ACTR1B (ENSODEG00000006779) #31	ENSODEG00000007357 #33	SEMA4C (ENSODEG00000007356) #35	ANKRD39 (ENSODEG00000008651) #36
Long-tailed chinchilla	MODERN SPECIES	177	NPAS2 (ENSCLAG00000006228)	ENSCLAG00000004610	NMS (ENSCLAG00000004166)	CHST10 (ENSCLAG00000003206)	AFF3 (ENSCLAG00000017100)	REV1 (ENSCLAG00000009243)	EIF5B (ENSCLAG00000007674)	TXNDC9 (ENSCLAG00000006644)	LYG1 (ENSCLAG00000006423)	LYG2 (ENSCLAG00000006394)	MRPL30 (ENSCLAG00000005684)	MITD1 (ENSCLAG00000005479)	LIPT1 (ENSCLAG00000005395)	TSGA10 (ENSCLAG00000006236) #20	CRACDL (ENSCLAG00000005885) #21	MGAT4A (ENSCLAG00000003213) #22	ENSCLAG00000006024 #23	COA5 (ENSCLAG00000005518) #24	INPP4A (ENSCLAG00000013632) #25	CNGA3 (ENSCLAG00000004111) #26	VWA3B (ENSCLAG00000010185) #27	TMEM131 (ENSCLAG00000005726) #28	ZAP70 (ENSCLAG00000005113) #29	ACTR1B (ENSCLAG00000004041) #31	COX5B (ENSCLAG00000003963) #32	ENSCLAG00000004009 #33	SEMA4C (ENSCLAG00000003481) #35	ANKRD39 (ENSCLAG00000003185) #36	ANKRD23 (ENSCLAG00000006172) #37	ENSCLAG00000005680	CNNM4 (ENSCLAG00000005276)
Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00980000202892	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Suina	ANCESTRAL SPECIES	50	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102	ENSGT00940000156317
Chacoan peccary	MODERN SPECIES	184	PDCL3 (ENSCWAG00000001508)	NMS (ENSCWAG00000001481)	CHST10 (ENSCWAG00000001461)	LONRF2 (ENSCWAG00000001433)	AFF3 (ENSCWAG00000001275)	REV1 (ENSCWAG00000001226)	EIF5B (ENSCWAG00000001187)	TXNDC9 (ENSCWAG00000001148)	LYG2 (ENSCWAG00000001112)	MRPL30 (ENSCWAG00000001078)	MITD1 (ENSCWAG00000001056)	LIPT1 (ENSCWAG00000001041)	C2orf15 (ENSCWAG00000001031)	TSGA10 (ENSCWAG00000001003) #20	CRACDL (ENSCWAG00000000981) #21	MGAT4A (ENSCWAG00000000956) #22	UNC50 (ENSCWAG00000000940) #23	COA5 (ENSCWAG00000000926) #24	INPP4A (ENSCWAG00000000447) #25	CNGA3 (ENSCWAG00000000281) #26	ENSCWAG00000000241 #27	ENSCWAG00000000072 #27	TMEM131 (ENSCWAG00000010314) #28	ZAP70 (ENSCWAG00000010124) #29	ACTR1B (ENSCWAG00000010070) #31	COX5B (ENSCWAG00000010028) #32	ENSCWAG00000009962 #33	ENSCWAG00000009904 #33	SEMA4C (ENSCWAG00000009804) #35	ANKRD39 (ENSCWAG00000009776) #36	ANKRD23 (ENSCWAG00000009608) #37
Pig	MODERN SPECIES	11	AFF3 (ENSSSCG00000055832)	ENSSSCG00000041855	REV1 (ENSSSCG00000008179)	EIF5B (ENSSSCG00000008180)	TXNDC9 (ENSSSCG00000008181)	LYG2 (ENSSSCG00000053360)	MRPL30 (ENSSSCG00000008183)	MITD1 (ENSSSCG00000008185)	ENSSSCG00000045084	ENSSSCG00000037588	ENSSSCG00000034715	ENSSSCG00000038865	C2orf15 (ENSSSCG00000054074)	TSGA10 (ENSSSCG00000008186) #20	CRACDL (ENSSSCG00000008187) #21	MGAT4A (ENSSSCG00000008188) #22	UNC50 (ENSSSCG00000025010) #23	COA5 (ENSSSCG00000058408) #24	INPP4A (ENSSSCG00000008190) #25	CNGA3 (ENSSSCG00000027113) #26	VWA3B (ENSSSCG00000033394) #27	TMEM131 (ENSSSCG00000008192) #28	ENSSSCG00000008193 #29	ACTR1B (ENSSSCG00000008194) #31	COX5B (ENSSSCG00000008195) #32	FAM178B (ENSSSCG00000008196) #33	SEMA4C (ENSSSCG00000008197) #35	ANKRD39 (ENSSSCG00000058741) #36	ANKRD23 (ENSSSCG00000008200) #37	CNNM3 (ENSSSCG00000008201)	CNNM4 (ENSSSCG00000008202)
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Cetacea	ANCESTRAL SPECIES	16	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159720.h	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b.q #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Odontoceti	ANCESTRAL SPECIES	15	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769.l.a	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159720.h	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b.q #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769.l.a	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159720.h	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b.q #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT00940000154295.a	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000016769.l.a	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159720.h	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b.q #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958	ENSGT00940000160547 #36
Vaquita	MODERN SPECIES	4	ENSPSNG00000008121	PDCL3 (ENSPSNG00000008086)	ENSPSNG00000008033	CHST10 (ENSPSNG00000008016)	LONRF2 (ENSPSNG00000007991)	AFF3 (ENSPSNG00000007712)	REV1 (ENSPSNG00000007630)	EIF5B (ENSPSNG00000007568)	ENSPSNG00000007529	ENSPSNG00000007338	MITD1 (ENSPSNG00000007272)	LIPT1 (ENSPSNG00000007250)	C2orf15 (ENSPSNG00000007210)	TSGA10 (ENSPSNG00000007069) #20	CRACDL (ENSPSNG00000006902) #21	MGAT4A (ENSPSNG00000006763) #22	UNC50 (ENSPSNG00000006686) #23	COA5 (ENSPSNG00000006653) #24	INPP4A (ENSPSNG00000006545) #25	CNGA3 (ENSPSNG00000006428) #26	ENSPSNG00000006360	ENSPSNG00000006330	VWA3B (ENSPSNG00000006201) #27	TMEM131 (ENSPSNG00000005999) #28	ZAP70 (ENSPSNG00000005873) #29	ACTR1B (ENSPSNG00000005828) #31	ENSPSNG00000005802 #32	ENSPSNG00000005757 #33	ENSPSNG00000005721 #33	SEMA4C (ENSPSNG00000005680) #35	ANKRD39 (ENSPSNG00000005638) #36
Monodontidae	ANCESTRAL SPECIES	13	ENSGT00940000154295.a	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000016769.l.a	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00940000154788.ib.a.a.a	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159720.h	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b.q #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00910000146958
Beluga whale	MODERN SPECIES	35	NPAS2 (ENSDLEG00000001128)	ENSDLEG00000001171	PDCL3 (ENSDLEG00000001180)	CHST10 (ENSDLEG00000001204)	LONRF2 (ENSDLEG00000001228)	AFF3 (ENSDLEG00000001264)	REV1 (ENSDLEG00000001309)	EIF5B (ENSDLEG00000001347)	TXNDC9 (ENSDLEG00000001368)	MRPL30 (ENSDLEG00000001376)	MITD1 (ENSDLEG00000001391)	LIPT1 (ENSDLEG00000001405)	ENSDLEG00000001408	TSGA10 (ENSDLEG00000001434) #20	KIAA1211L (ENSDLEG00000001458) #21	MGAT4A (ENSDLEG00000001474) #22	UNC50 (ENSDLEG00000001498) #23	INPP4A (ENSDLEG00000001527) #25	CNGA3 (ENSDLEG00000001649) #26	ENSDLEG00000001692 #27	ENSDLEG00000001726	ENSDLEG00000001741	TMEM131 (ENSDLEG00000001803) #28	ENSDLEG00000002048	ENSDLEG00000002058 #29	ACTR1B (ENSDLEG00000002094) #31	ENSDLEG00000002200 #32	ENSDLEG00000002208 #33	SEMA4C (ENSDLEG00000002234) #35	ANKRD39 (ENSDLEG00000002259) #36	CNNM3 (ENSDLEG00000002275)
Narwhal	MODERN SPECIES	305	ENSMMNG00015018824	NMS (ENSMMNG00015018853)	CHST10 (ENSMMNG00015018890)	LONRF2 (ENSMMNG00015018929)	AFF3 (ENSMMNG00015019041)	REV1 (ENSMMNG00015019156)	EIF5B (ENSMMNG00015019188)	TXNDC9 (ENSMMNG00015019217)	LYG1 (ENSMMNG00015019262)	ENSMMNG00015015577	MITD1 (ENSMMNG00015015609)	LIPT1 (ENSMMNG00015015629)	C2orf15 (ENSMMNG00015015642)	TSGA10 (ENSMMNG00015015697) #20	CRACDL (ENSMMNG00015015949) #21	MGAT4A (ENSMMNG00015016172) #22	UNC50 (ENSMMNG00015016243) #23	COA5 (ENSMMNG00015016284) #24	INPP4A (ENSMMNG00015016429) #25	CNGA3 (ENSMMNG00015016684) #26	ENSMMNG00015016778 #27	ENSMMNG00015016805	ENSMMNG00015016879	ENSMMNG00015016900	TMEM131 (ENSMMNG00015016920) #28	ENSMMNG00015016984	ZAP70 (ENSMMNG00015017006) #29	ACTR1B (ENSMMNG00015017037) #31	ENSMMNG00015017069 #32	ENSMMNG00015017092 #33	ENSMMNG00015017221 #33
Dolphin	MODERN SPECIES	157															CRACDL (ENSTTRG00000006047) #21	MGAT4A (ENSTTRG00000006038) #22	UNC50 (ENSTTRG00000006034) #23	COA5 (ENSTTRG00000006032) #24	INPP4A (ENSTTRG00000006013) #25
Sperm whale	MODERN SPECIES	3	ENSPCTG00005011296	ENSPCTG00005011279	PDCL3 (ENSPCTG00005011242)	CHST10 (ENSPCTG00005011201)	LONRF2 (ENSPCTG00005011056)	AFF3 (ENSPCTG00005010804)	REV1 (ENSPCTG00005010733)	EIF5B (ENSPCTG00005010596)	TXNDC9 (ENSPCTG00005010511)	ENSPCTG00005010466	MITD1 (ENSPCTG00005010409)	LIPT1 (ENSPCTG00005010386)	C2orf15 (ENSPCTG00005010357)	TSGA10 (ENSPCTG00005010178) #20	CRACDL (ENSPCTG00005009973) #21	MGAT4A (ENSPCTG00005009907) #22	UNC50 (ENSPCTG00005009833) #23	COA5 (ENSPCTG00005009775) #24	INPP4A (ENSPCTG00005009619) #25	CNGA3 (ENSPCTG00005009510) #26	ENSPCTG00005009446 #27	ENSPCTG00005009413	ENSPCTG00005009370	ENSPCTG00005009340	TMEM131 (ENSPCTG00005008544) #28	ENSPCTG00005008457	ZAP70 (ENSPCTG00005008385) #29	ACTR1B (ENSPCTG00005008324) #31	ENSPCTG00005008310 #32	ENSPCTG00005008282 #33	SEMA4C (ENSPCTG00005008248) #35
Blue whale	MODERN SPECIES	4	RPL31 (ENSBMSG00010013601)	NPAS2 (ENSBMSG00010013617)	ENSBMSG00010013633	NMS (ENSBMSG00010013648)	CHST10 (ENSBMSG00010013659)	LONRF2 (ENSBMSG00010013677)	REV1 (ENSBMSG00010013763)	EIF5B (ENSBMSG00010013793)	TXNDC9 (ENSBMSG00010013808)	MRPL30 (ENSBMSG00010013826)	MITD1 (ENSBMSG00010013866)	LIPT1 (ENSBMSG00010013895)	C2orf15 (ENSBMSG00010013915)	TSGA10 (ENSBMSG00010013985) #20	CRACDL (ENSBMSG00010014146) #21	MGAT4A (ENSBMSG00010014194) #22	UNC50 (ENSBMSG00010014253) #23	INPP4A (ENSBMSG00010014402) #25	ENSBMSG00010015299	CNGA3 (ENSBMSG00010015349) #26	ENSBMSG00010015433 #27	ENSBMSG00010015484	ENSBMSG00010015543 #28	ENSBMSG00010015673	ENSBMSG00010015686 #29	ACTR1B (ENSBMSG00010015717) #31	ENSBMSG00010015738 #32	ENSBMSG00010015766 #33	SEMA4C (ENSBMSG00010015784) #35	CNNM3 (ENSBMSG00010015842)	ANKRD39 (ENSBMSG00010015896) #36
Pecora	ANCESTRAL SPECIES	5	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00970000197129	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.s.a #32	ENSGT00530000064017.b.h #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Percora_a	ANCESTRAL SPECIES	13	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00970000197129	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.s.a #32	ENSGT00530000064017.b.h #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Siberian musk deer	MODERN SPECIES	245	ENSMMSG00000001724	NMS (ENSMMSG00000001744)	CHST10 (ENSMMSG00000001776)	ENSMMSG00000001804	AFF3 (ENSMMSG00000001853)	REV1 (ENSMMSG00000001921)	EIF5B (ENSMMSG00000001949)	TXNDC9 (ENSMMSG00000001969)	LYG1 (ENSMMSG00000001991)	LYG2 (ENSMMSG00000002011)	MRPL30 (ENSMMSG00000002024)	MITD1 (ENSMMSG00000002054)	LIPT1 (ENSMMSG00000002082)	TSGA10 (ENSMMSG00000002102) #20	CRACDL (ENSMMSG00000002148) #21	MGAT4A (ENSMMSG00000002195) #22	UNC50 (ENSMMSG00000002240) #23	COA5 (ENSMMSG00000002264) #24	INPP4A (ENSMMSG00000002395) #25	CNGA3 (ENSMMSG00000002544) #26	ENSMMSG00000002609 #27	ENSMMSG00000002677 #27	TMEM131 (ENSMMSG00000002734) #28	ZAP70 (ENSMMSG00000002799) #29	C2orf92 (ENSMMSG00000002843) #30	ACTR1B (ENSMMSG00000002958) #31	COX5B (ENSMMSG00000002990) #32	ENSMMSG00000003018 #33	ENSMMSG00000003044 #33	SEMA4C (ENSMMSG00000003067) #35	ANKRD39 (ENSMMSG00000003097) #36
Bovidae	ANCESTRAL SPECIES	5	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00970000197129	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00950000184459	ENSGT00940000161587 #31	ENSGT00390000011010.b.s.a #32	ENSGT00530000064017.b.h #33	ENSGT00530000064017.b.g #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Bovinae	ANCESTRAL SPECIES	4	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00970000197129	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00950000184459	ENSGT00940000161587 #31	ENSGT00390000011010.b.s.a #32	ENSGT00530000064017.b.h #33	ENSGT00530000064017.b.g #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Bos	ANCESTRAL SPECIES	5	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000163243	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.b.b.a	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00970000197129	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00950000184459	ENSGT00940000161587 #31	ENSGT00390000011010.b.s.a #32	ENSGT00530000064017.b.h #33	ENSGT00530000064017.b.g #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Bos_a	ANCESTRAL SPECIES	6	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000163243	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.b.b.a	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00970000197129	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00950000184459	ENSGT00940000161587 #31	ENSGT00390000011010.b.s.a #32	ENSGT00530000064017.b.h #33	ENSGT00530000064017.b.g #33	ENSGT00940000159885 #35	ENSGT00940000161920 #37	ENSGT00940000156317
Domestic yak	MODERN SPECIES	28	ENSBGRG00000026843	AFF3 (ENSBGRG00000026841)	REV1 (ENSBGRG00000026837)	ENSBGRG00000026836	EIF5B (ENSBGRG00000026834)	TXNDC9 (ENSBGRG00000026833)	LYG1 (ENSBGRG00000026832)	LYG2 (ENSBGRG00000026831)	ENSBGRG00000026830	MITD1 (ENSBGRG00000026829)	LIPT1 (ENSBGRG00000026828)	ENSBGRG00000026827	C2orf15 (ENSBGRG00000026826)	TSGA10 (ENSBGRG00000026825) #20	ENSBGRG00000026822 #21	MGAT4A (ENSBGRG00000026821) #22	UNC50 (ENSBGRG00000026820) #23	COA5 (ENSBGRG00000026819) #24	INPP4A (ENSBGRG00000026818) #25	CNGA3 (ENSBGRG00000026815) #26	VWA3B (ENSBGRG00000026810) #27	TMEM131 (ENSBGRG00000026809) #28	ZAP70 (ENSBGRG00000026808) #29	ENSBGRG00000026807	ACTR1B (ENSBGRG00000026806) #31	ENSBGRG00000026805 #32	ENSBGRG00000026804 #33	SEMA4C (ENSBGRG00000026803) #35	ENSBGRG00000026800 #37	CNNM4 (ENSBGRG00000026799)	LMAN2L (ENSBGRG00000026798)
Bos_b	ANCESTRAL SPECIES	9	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT01100000263480.a.a.b.b.b.a.b.b.b.b.b.a	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00950000184459	ENSGT00940000161587 #31	ENSGT00390000011010.b.s.a #32	ENSGT00530000064017.b.h #33	ENSGT00530000064017.b.g #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Cow	MODERN SPECIES	2	TBC1D8 (ENSBTAG00000025898)	NPAS2 (ENSBTAG00000019697)	PDCL3 (ENSBTAG00000009962)	NMS (ENSBTAG00000034184)	CHST10 (ENSBTAG00000004328)	AFF3 (ENSBTAG00000012449)	REV1 (ENSBTAG00000043999)	EIF5B (ENSBTAG00000034255)	TXNDC9 (ENSBTAG00000004544)	MRPL30 (ENSBTAG00000038949)	MITD1 (ENSBTAG00000003970)	LIPT1 (ENSBTAG00000003965)	C11H2orf15 (ENSBTAG00000048207)	TSGA10 (ENSBTAG00000018991) #20	CRACDL (ENSBTAG00000054686) #21	MGAT4A (ENSBTAG00000010388) #22	UNC50 (ENSBTAG00000014877) #23	COA5 (ENSBTAG00000014873) #24	INPP4A (ENSBTAG00000004814) #25	CNGA3 (ENSBTAG00000054062)	VWA3B (ENSBTAG00000034384) #27	TMEM131 (ENSBTAG00000006744) #28	ZAP70 (ENSBTAG00000005892) #29	ACTR1B (ENSBTAG00000048041) #31	COX5B (ENSBTAG00000053107) #32	ENSBTAG00000006019 #33	ENSBTAG00000050476 #33	SEMA4C (ENSBTAG00000021920) #35	ANKRD39 (ENSBTAG00000035244) #36	ANKRD23 (ENSBTAG00000010849) #37	CNNM3 (ENSBTAG00000010846)
Hybrid Bos Indicus	MODERN SPECIES	2	ENSBIXG00005013227	ENSBIXG00005013235	AFF3 (ENSBIXG00005013445)	REV1 (ENSBIXG00005001648)	ENSBIXG00005013560	EIF5B (ENSBIXG00005005393)	TXNDC9 (ENSBIXG00005013621)	LYG1 (ENSBIXG00005013679)	LYG2 (ENSBIXG00005013704)	MITD1 (ENSBIXG00005013729)	MRPL30 (ENSBIXG00005013778)	ENSBIXG00005001715	C2orf15 (ENSBIXG00005013817)	TSGA10 (ENSBIXG00005013904) #20	CRACDL (ENSBIXG00005013967) #21	MGAT4A (ENSBIXG00005014031) #22	UNC50 (ENSBIXG00005014049) #23	COA5 (ENSBIXG00005014067) #24	INPP4A (ENSBIXG00005014230) #25	CNGA3 (ENSBIXG00005014308) #26	VWA3B (ENSBIXG00005014425) #27	ENSBIXG00005014465	TMEM131 (ENSBIXG00005002022) #28	ZAP70 (ENSBIXG00005014587) #29	ENSBIXG00005014599	ACTR1B (ENSBIXG00005002040) #31	ENSBIXG00005014631 #32	ENSBIXG00005014696 #33	SEMA4C (ENSBIXG00005014765) #35	ENSBIXG00005014888 #37	CNNM4 (ENSBIXG00005014950)
American bison	MODERN SPECIES	3359	NMS (ENSBBBG00000022959)	CHST10 (ENSBBBG00000022987)	ENSBBBG00000023006	AFF3 (ENSBBBG00000023141)	REV1 (ENSBBBG00000000447)	EIF5B (ENSBBBG00000000362)	TXNDC9 (ENSBBBG00000000341)	LYG1 (ENSBBBG00000000331)	LYG2 (ENSBBBG00000007341)	ENSBBBG00000023204	MITD1 (ENSBBBG00000023214)	LIPT1 (ENSBBBG00000023219)	ENSBBBG00000023222	C2orf15 (ENSBBBG00000023226)	TSGA10 (ENSBBBG00000023279) #20	MGAT4A (ENSBBBG00000006117) #22	UNC50 (ENSBBBG00000023400) #23	COA5 (ENSBBBG00000023408) #24	INPP4A (ENSBBBG00000023721) #25	CNGA3 (ENSBBBG00000023779) #26	VWA3B (ENSBBBG00000006202) #27	TMEM131 (ENSBBBG00000023871) #28	ZAP70 (ENSBBBG00000006241) #29	ENSBBBG00000024007	ACTR1B (ENSBBBG00000024028) #31	ENSBBBG00000006250 #32	ENSBBBG00000024069 #33	ENSBBBG00000008815 #33	ENSBBBG00000024084 #35	ANKRD39 (ENSBBBG00000006268) #36	ANKRD23 (ENSBBBG00000008982) #37
Caprinae	ANCESTRAL SPECIES	9	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00950000184459	ENSGT00940000161587 #31	ENSGT00390000011010.b.s.a #32	ENSGT00530000064017.b.h #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Rambouillet Sheep	MODERN SPECIES	19	RFX8 (ENSOARG00020011330)	CREG2 (ENSOARG00020011676)	RNF149 (ENSOARG00020011743)	CNOT11 (ENSOARG00020011860)	TBC1D8 (ENSOARG00020011910)	RPL31 (ENSOARG00020012320)	NPAS2 (ENSOARG00020012376)	PDCL3 (ENSOARG00020012507)	CHST10 (ENSOARG00020012569)	ENSOARG00020012666	LYG2 (ENSOARG00020012789)	MRPL30 (ENSOARG00020012811)	MITD1 (ENSOARG00020012845)	C2orf15 (ENSOARG00020013004)	TSGA10 (ENSOARG00020013054) #20	MGAT4A (ENSOARG00020013507) #22	UNC50 (ENSOARG00020013795) #23	COA5 (ENSOARG00020013905) #24	ENSOARG00020013955	INPP4A (ENSOARG00020014037) #25	ENSOARG00020014979 #26	CNGA3 (ENSOARG00020015072) #26	TMEM131 (ENSOARG00020015205) #28	ZAP70 (ENSOARG00020016071) #29	ENSOARG00020016173	ACTR1B (ENSOARG00020016260) #31	ENSOARG00020016302 #32	ENSOARG00020016361 #33	ENSOARG00020016486 #33	SEMA4C (ENSOARG00020016543) #35	ANKRD39 (ENSOARG00020016738) #36
Goat	MODERN SPECIES	2	CHST10 (ENSCHIG00000019507)	LONRF2 (ENSCHIG00000016195)	AFF3 (ENSCHIG00000026653)	REV1 (ENSCHIG00000012748)	EIF5B (ENSCHIG00000027106)	TXNDC9 (ENSCHIG00000022552)	LYG1 (ENSCHIG00000016368)	LYG2 (ENSCHIG00000015171)	MRPL30 (ENSCHIG00000024135)	MITD1 (ENSCHIG00000011131)	LIPT1 (ENSCHIG00000008586)	C2orf15 (ENSCHIG00000009783)	TSGA10 (ENSCHIG00000008548) #20	CRACDL (ENSCHIG00000019320) #21	ENSCHIG00000012290	MGAT4A (ENSCHIG00000015516) #22	UNC50 (ENSCHIG00000014096) #23	COA5 (ENSCHIG00000011177) #24	INPP4A (ENSCHIG00000024300) #25	CNGA3 (ENSCHIG00000013464) #26	ENSCHIG00000013478 #27	ENSCHIG00000022270 #27	TMEM131 (ENSCHIG00000024122) #28	ZAP70 (ENSCHIG00000012319) #29	ACTR1B (ENSCHIG00000021858) #31	COX5B (ENSCHIG00000016607) #32	FAM178B (ENSCHIG00000012703) #33	SEMA4C (ENSCHIG00000017412) #35	ANKRD39 (ENSCHIG00000022775) #36	ANKRD23 (ENSCHIG00000021170) #37	CNNM3 (ENSCHIG00000021387)
Yarkand deer	MODERN SPECIES	2	ENSCHYG00000011108	AFF3 (ENSCHYG00000010762)	EIF5B (ENSCHYG00000010650)	REV1 (ENSCHYG00000010255)	LYG1 (ENSCHYG00000010197)	LYG2 (ENSCHYG00000010066)	MRPL30 (ENSCHYG00000010007)	LIPT1 (ENSCHYG00000009991)	MITD1 (ENSCHYG00000009803)	ENSCHYG00000009752	C2orf15 (ENSCHYG00000009731)	ENSCHYG00000009494 #20	CRACDL (ENSCHYG00000009362) #21	ENSCHYG00000009319	ENSCHYG00000009290	MGAT4A (ENSCHYG00000009044) #22	UNC50 (ENSCHYG00000008881) #23	ENSCHYG00000008816 #24	INPP4A (ENSCHYG00000008479) #25	CNGA3 (ENSCHYG00000008378) #26	ENSCHYG00000008262	ENSCHYG00000008103	ENSCHYG00000007990	ENSCHYG00000007963	ENSCHYG00000007879	ENSCHYG00000007850	ENSCHYG00000007830	ENSCHYG00000007812	ENSCHYG00000007700	ENSCHYG00000007650	ENSCHYG00000007633
Camelidae	ANCESTRAL SPECIES	56	ENSGT00940000160744	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.o.a #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Arabian camel	MODERN SPECIES	20	ENSCDRG00005017146	NPAS2 (ENSCDRG00005017274)	PDCL3 (ENSCDRG00005017591)	CHST10 (ENSCDRG00005017620)	LONRF2 (ENSCDRG00005017680)	REV1 (ENSCDRG00005017730)	EIF5B (ENSCDRG00005017819)	TXNDC9 (ENSCDRG00005017853)	LYG2 (ENSCDRG00005017902)	MRPL30 (ENSCDRG00005017961)	MITD1 (ENSCDRG00005017985)	LIPT1 (ENSCDRG00005018012)	C2orf15 (ENSCDRG00005018019)	TSGA10 (ENSCDRG00005018039) #20	CRACDL (ENSCDRG00005018109) #21	MGAT4A (ENSCDRG00005018207) #22	UNC50 (ENSCDRG00005018271) #23	COA5 (ENSCDRG00005018314) #24	INPP4A (ENSCDRG00005018375) #25	CNGA3 (ENSCDRG00005018667) #26	ENSCDRG00005018745 #27	ENSCDRG00005018773 #27	ENSCDRG00005018823	ENSCDRG00005018829	TMEM131 (ENSCDRG00005018872) #28	ZAP70 (ENSCDRG00005018964) #29	C2orf92 (ENSCDRG00005019004) #30	ACTR1B (ENSCDRG00005019074) #31	ENSCDRG00005019112 #32	ENSCDRG00005019134 #33	SEMA4C (ENSCDRG00005019162) #35
Alpaca	MODERN SPECIES	1934																MGAT4A (ENSVPAG00000008072) #22
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Carnivora	ANCESTRAL SPECIES	19	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Felidae	ANCESTRAL SPECIES	3	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.e #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Panthera	ANCESTRAL SPECIES	2	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.e #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00950000184459	ENSGT00940000161587 #31	ENSGT00390000011010.b.e #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
leopard	MODERN SPECIES		NMS (ENSPPRG00000015783)	CHST10 (ENSPPRG00000015300)	LONRF2 (ENSPPRG00000015015)	AFF3 (ENSPPRG00000014330)	REV1 (ENSPPRG00000012661)	EIF5B (ENSPPRG00000010820)	TXNDC9 (ENSPPRG00000009926)	LYG1 (ENSPPRG00000009781)	LYG2 (ENSPPRG00000009614)	MRPL30 (ENSPPRG00000008888)	MITD1 (ENSPPRG00000008767)	LIPT1 (ENSPPRG00000022025)	C2orf15 (ENSPPRG00000008575)	TSGA10 (ENSPPRG00000008522) #20	CRACDL (ENSPPRG00000007504) #21	MGAT4A (ENSPPRG00000006986) #22	UNC50 (ENSPPRG00000006518) #23	COA5 (ENSPPRG00000006022) #24	INPP4A (ENSPPRG00000005732) #25	CNGA3 (ENSPPRG00000002353) #26	ENSPPRG00000001157 #27	ENSPPRG00000000683	ENSPPRG00000021843	TMEM131 (ENSPPRG00000022922) #28	ZAP70 (ENSPPRG00000023713) #29	ACTR1B (ENSPPRG00000023797) #31	ENSPPRG00000023899 #32	ENSPPRG00000023931 #33	ENSPPRG00000024040 #33	SEMA4C (ENSPPRG00000022180) #35	ANKRD39 (ENSPPRG00000021969) #36
lion	MODERN SPECIES	3	NMS (ENSPLOG00000014275)	CHST10 (ENSPLOG00000014237)	LONRF2 (ENSPLOG00000014193)	AFF3 (ENSPLOG00000013918)	REV1 (ENSPLOG00000013773)	EIF5B (ENSPLOG00000013724)	TXNDC9 (ENSPLOG00000013686)	LYG1 (ENSPLOG00000013636)	LYG2 (ENSPLOG00000013551)	MRPL30 (ENSPLOG00000013490)	MITD1 (ENSPLOG00000013428)	LIPT1 (ENSPLOG00000013408)	C2orf15 (ENSPLOG00000013398)	TSGA10 (ENSPLOG00000013333) #20	CRACDL (ENSPLOG00000013108) #21	MGAT4A (ENSPLOG00000012999) #22	UNC50 (ENSPLOG00000012904) #23	COA5 (ENSPLOG00000012868) #24	INPP4A (ENSPLOG00000012680) #25	CNGA3 (ENSPLOG00000012471) #26	VWA3B (ENSPLOG00000012102) #27	TMEM131 (ENSPLOG00000011755) #28	ZAP70 (ENSPLOG00000011675) #29	ENSPLOG00000011600	ACTR1B (ENSPLOG00000011566) #31	COX5B (ENSPLOG00000011531) #32	ENSPLOG00000011440 #33	ENSPLOG00000011388 #33	SEMA4C (ENSPLOG00000011288) #35	ANKRD39 (ENSPLOG00000011250) #36	ANKRD23 (ENSPLOG00000011095) #37
Tiger	MODERN SPECIES	576	PDCL3 (ENSPTIG00000017144)	NMS (ENSPTIG00000017606)	CHST10 (ENSPTIG00000017989)	LONRF2 (ENSPTIG00000018241)	AFF3 (ENSPTIG00000018781)	REV1 (ENSPTIG00000020411)	EIF5B (ENSPTIG00000021215)	TXNDC9 (ENSPTIG00000021915)	LYG1 (ENSPTIG00000021980)	LYG2 (ENSPTIG00000000787)	MRPL30 (ENSPTIG00000004998)	MITD1 (ENSPTIG00000005473)	C2orf15 (ENSPTIG00000006213)	TSGA10 (ENSPTIG00000006568) #20	CRACDL (ENSPTIG00000010938) #21	MGAT4A (ENSPTIG00000011997) #22	UNC50 (ENSPTIG00000012601) #23	COA5 (ENSPTIG00000013240) #24	INPP4A (ENSPTIG00000013666) #25	CNGA3 (ENSPTIG00000019817) #26	VWA3B (ENSPTIG00000020693) #27	TMEM131 (ENSPTIG00000021717) #28	ENSPTIG00000004615 #29	C2orf92 (ENSPTIG00000005687) #30	ACTR1B (ENSPTIG00000007334) #31	COX5B (ENSPTIG00000008053) #32	ENSPTIG00000008739 #33	ENSPTIG00000009005 #33	SEMA4C (ENSPTIG00000009341) #35	ANKRD39 (ENSPTIG00000009735) #36	ANKRD23 (ENSPTIG00000010245) #37
Cat	MODERN SPECIES	2	CHST10 (ENSFCAG00000023928)	LONRF2 (ENSFCAG00000022308)	AFF3 (ENSFCAG00000029975)	REV1 (ENSFCAG00000009785)	EIF5B (ENSFCAG00000009782)	TXNDC9 (ENSFCAG00000013179)	LYG1 (ENSFCAG00000003335)	LYG2 (ENSFCAG00000003333)	ENSFCAG00000024233	MITD1 (ENSFCAG00000012204)	LIPT1 (ENSFCAG00000014009)	C2orf15 (ENSFCAG00000038146)	TSGA10 (ENSFCAG00000029155) #20	HNRNPA1L3 (ENSFCAG00000042512)	CRACDL (ENSFCAG00000025018) #21	MGAT4A (ENSFCAG00000029642) #22	UNC50 (ENSFCAG00000010337) #23	COA5 (ENSFCAG00000004424) #24	INPP4A (ENSFCAG00000013913) #25	CNGA3 (ENSFCAG00000008642) #26	VWA3B (ENSFCAG00000006917) #27	TMEM131 (ENSFCAG00000010411) #28	ZAP70 (ENSFCAG00000010410) #29	ENSFCAG00000045614	ACTR1B (ENSFCAG00000030483) #31	CNNM4 (ENSFCAG00000001831)	COX5B (ENSFCAG00000001704) #32	ENSFCAG00000050872 #33	ENSFCAG00000033215 #33	SEMA4C (ENSFCAG00000001834) #35	ANKRD39 (ENSFCAG00000018835) #36
Caniformia	ANCESTRAL SPECIES	18	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.h.a #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Canidae	ANCESTRAL SPECIES	10	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237.jb #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.h.a.c #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00390000004891.a	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237.jb #27	ENSGT00530000063614.a.a #28	ENSGT00390000015789.c.a.a	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.h.a.c #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000175850
Dingo	MODERN SPECIES	307	ENSCAFG00020024596	REV1 (ENSCAFG00020024602)	EIF5B (ENSCAFG00020024623)	TXNDC9 (ENSCAFG00020024954)	LYG1 (ENSCAFG00020024957)	LYG2 (ENSCAFG00020024959)	ENSCAFG00020024963	MRPL30 (ENSCAFG00020024965)	ENSCAFG00020024970	MITD1 (ENSCAFG00020024971)	LIPT1 (ENSCAFG00020024977)	ENSCAFG00020024978	C2orf15 (ENSCAFG00020024979)	TSGA10 (ENSCAFG00020024982) #20	CRACDL (ENSCAFG00020024994) #21	MGAT4A (ENSCAFG00020025003) #22	UNC50 (ENSCAFG00020025006) #23	COA5 (ENSCAFG00020025007) #24	INPP4A (ENSCAFG00020025042) #25	CNGA3 (ENSCAFG00020025184) #26	ENSCAFG00020025188 #27	ENSCAFG00020025193 #27	TMEM131 (ENSCAFG00020025234) #28	ENSCAFG00020025333	ZAP70 (ENSCAFG00020025335) #29	ACTR1B (ENSCAFG00020025337) #31	ENSCAFG00020025338 #32	ENSCAFG00020025341 #33	SEMA4C (ENSCAFG00020025343) #35	ANKRD39 (ENSCAFG00020025346) #36	ENSCAFG00020025347
Dog	MODERN SPECIES	1	LONRF2 (ENSCAFG00845016364)	AFF3 (ENSCAFG00845016749)	ENSCAFG00845016957	REV1 (ENSCAFG00845017087)	EIF5B (ENSCAFG00845017464)	TXNDC9 (ENSCAFG00845017605)	LYG1 (ENSCAFG00845017704)	LYG2 (ENSCAFG00845017793)	MRPL30 (ENSCAFG00845017929)	ENSCAFG00845017985	MITD1 (ENSCAFG00845018043)	LIPT1 (ENSCAFG00845018116)	ENSCAFG00845018181	TSGA10 (ENSCAFG00845018318) #20	CRACDL (ENSCAFG00845018719) #21	MGAT4A (ENSCAFG00845019003) #22	ENSCAFG00845019179	UNC50 (ENSCAFG00845019213) #23	INPP4A (ENSCAFG00845019342) #25	CNGA3 (ENSCAFG00845020028) #26	VWA3B (ENSCAFG00845020347) #27	TMEM131 (ENSCAFG00845020834) #28	ENSCAFG00845021613	ZAP70 (ENSCAFG00845021644) #29	C10H2orf92 (ENSCAFG00845021810) #30	ACTR1B (ENSCAFG00845022064) #31	COX5B (ENSCAFG00845022269) #32	FAM178B (ENSCAFG00845022390) #33	SEMA4C (ENSCAFG00845022633) #35	ANKRD39 (ENSCAFG00845022833) #37	ENSCAFG00845023050
Red fox	MODERN SPECIES	10	NPAS2 (ENSVVUG00000028672)	PDCL3 (ENSVVUG00000028679)	CHST10 (ENSVVUG00000028686)	LONRF2 (ENSVVUG00000028688)	AFF3 (ENSVVUG00000028696)	REV1 (ENSVVUG00000028698)	EIF5B (ENSVVUG00000028702)	TXNDC9 (ENSVVUG00000028706)	LYG1 (ENSVVUG00000028710)	LYG2 (ENSVVUG00000028715)	ENSVVUG00000028722	MITD1 (ENSVVUG00000028724)	ENSVVUG00000028727	TSGA10 (ENSVVUG00000028730) #20	CRACDL (ENSVVUG00000028741) #21	MGAT4A (ENSVVUG00000028745) #22	UNC50 (ENSVVUG00000028749) #23	COA5 (ENSVVUG00000028750) #24	INPP4A (ENSVVUG00000028751) #25	CNGA3 (ENSVVUG00000028765) #26	VWA3B (ENSVVUG00000028771) #27	TMEM131 (ENSVVUG00000028778) #28	ENSVVUG00000028802 #29	ENSVVUG00000028803	ACTR1B (ENSVVUG00000028806) #31	ENSVVUG00000028808 #32	FAM178B (ENSVVUG00000028809) #33	SEMA4C (ENSVVUG00000028812) #35	ANKRD39 (ENSVVUG00000028815) #36	ENSVVUG00000028818 #37	CNNM3 (ENSVVUG00000028820)
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.h.a.a #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Mustelinae	ANCESTRAL SPECIES	86	ENSGT00390000006820	ENSGT00940000159118	ENSGT00530000063425.a.b	ENSGT00550000075024	ENSGT00940000161424	ENSGT00550000074867	ENSGT00390000018245.c	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00390000000424	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b.h.a.a #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000156317	ENSGT00940000155596
American mink	MODERN SPECIES	496															CRACDL (ENSNVIG00000017702) #21	MGT4A (ENSNVIG00000017658) #22	UNC50 (ENSNVIG00000017614) #23	COA5 (ENSNVIG00000017605) #24	INPP4A (ENSNVIG00000017276) #25	CNGA3 (ENSNVIG00000017196) #26	ENSNVIG00000017191	ENSNVIG00000017177 #27
Ferret	MODERN SPECIES	199	STON1 (ENSMPUG00000010943)	PPP1R21 (ENSMPUG00000010980)	FOXN2 (ENSMPUG00000010993)	FBXO11 (ENSMPUG00000011000)	MSH6 (ENSMPUG00000011012)	KCNK12 (ENSMPUG00000011022)	MSH2 (ENSMPUG00000011028)	EPCAM (ENSMPUG00000011040)	LYG1 (ENSMPUG00000011050)	LYG2 (ENSMPUG00000011054)	MRPL30 (ENSMPUG00000011085)	MITD1 (ENSMPUG00000011091)	LIPT1 (ENSMPUG00000019923)	ENSMPUG00000011099 #20	CRACDL (ENSMPUG00000011105) #21	MGAT4A (ENSMPUG00000011121) #22	UNC50 (ENSMPUG00000011128) #23	INPP4A (ENSMPUG00000011144) #25	CNGA3 (ENSMPUG00000011153) #26	VWA3B (ENSMPUG00000011232) #27	TMEM131 (ENSMPUG00000011265) #28	ENSMPUG00000019924	ZAP70 (ENSMPUG00000011312) #29	ACTR1B (ENSMPUG00000011320) #31	COX5B (ENSMPUG00000011327) #32	FAM178B (ENSMPUG00000011331) #33	SEMA4C (ENSMPUG00000011364) #35	ANKRD39 (ENSMPUG00000011373) #36	ANKRD23 (ENSMPUG00000011396) #37	CNNM4 (ENSMPUG00000011446)	LMAN2L (ENSMPUG00000011486)
Ursidae	ANCESTRAL SPECIES	9	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b.g	ENSGT00950000182974.a.a.a.b.h	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b.h.a.a #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Giant Panda	MODERN SPECIES	14	PDCL3 (ENSAMEG00000015651)	ENSAMEG00000030016	CHST10 (ENSAMEG00000015665)	LONRF2 (ENSAMEG00000015676)	AFF3 (ENSAMEG00000013204)	REV1 (ENSAMEG00000013212)	ENSAMEG00000013269	TXNDC9 (ENSAMEG00000013310)	LYG1 (ENSAMEG00000013331)	LYG2 (ENSAMEG00000013334)	MRPL30 (ENSAMEG00000030705)	MITD1 (ENSAMEG00000013353)	C2orf15 (ENSAMEG00000023694)	TSGA10 (ENSAMEG00000013366) #20	CRACDL (ENSAMEG00000029826) #21	MGAT4A (ENSAMEG00000013383) #22	UNC50 (ENSAMEG00000013423) #23	COA5 (ENSAMEG00000013440) #24	INPP4A (ENSAMEG00000013443) #25	CNGA3 (ENSAMEG00000013486) #26	VWA3B (ENSAMEG00000013508) #27	TMEM131 (ENSAMEG00000015324) #28	ZAP70 (ENSAMEG00000005181) #29	ENSAMEG00000024602 #30	ACTR1B (ENSAMEG00000005211) #31	ENSAMEG00000005242 #32	ENSAMEG00000005258 #33	ENSAMEG00000026725 #33	SEMA4C (ENSAMEG00000005274) #35	ANKRD23 (ENSAMEG00000005321) #37	CNNM4 (ENSAMEG00000005366)
Ursus	ANCESTRAL SPECIES	20	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b.g	ENSGT00950000182974.a.a.a.b.h	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT01010000222692	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b.h.a.a #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102
American black bear	MODERN SPECIES	5978																MGAT4A (ENSUAMG00000009780) #22	UNC50 (ENSUAMG00000009909) #23	COA5 (ENSUAMG00000009914) #24	INPP4A (ENSUAMG00000009919) #25
Polar bear	MODERN SPECIES	223	CHST10 (ENSUMAG00000007760)	LONRF2 (ENSUMAG00000007768)	ENSUMAG00000007800	ENSUMAG00000007823	REV1 (ENSUMAG00000007980)	EIF5B (ENSUMAG00000008519)	TXNDC9 (ENSUMAG00000008898)	LYG1 (ENSUMAG00000008915)	LYG2 (ENSUMAG00000008919)	MRPL30 (ENSUMAG00000008932)	MITD1 (ENSUMAG00000008943)	LIPT1 (ENSUMAG00000008951)	ENSUMAG00000008954	ENSUMAG00000008957 #20	ENSUMAG00000008986 #20	MGAT4A (ENSUMAG00000009021) #22	UNC50 (ENSUMAG00000009028) #23	COA5 (ENSUMAG00000009030) #24	INPP4A (ENSUMAG00000009194) #25	CNGA3 (ENSUMAG00000011545) #26	ENSUMAG00000011564 #27	ENSUMAG00000011618	TMEM131 (ENSUMAG00000011660) #28	ZAP70 (ENSUMAG00000011680) #29	ACTR1B (ENSUMAG00000011700) #31	ENSUMAG00000011709 #32	ENSUMAG00000011716 #33	SEMA4C (ENSUMAG00000011734) #35	ANKRD23 (ENSUMAG00000011744) #37	ENSUMAG00000011768	ENSUMAG00000011777
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102	ENSGT00940000156317
Equus	ANCESTRAL SPECIES	7	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT01090000263329	ENSGT00850000133613 #30	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37
Donkey	MODERN SPECIES	26	ENSEASG00005037836	CHST10 (ENSEASG00005018281)	LONRF2 (ENSEASG00005018280)	ENSEASG00005018278	AFF3 (ENSEASG00005018275)	REV1 (ENSEASG00005018273)	EIF5B (ENSEASG00005018269)	TXNDC9 (ENSEASG00005018267)	LYG1 (ENSEASG00005018261)	LYG2 (ENSEASG00005024322)	MRPL30 (ENSEASG00005021843)	MITD1 (ENSEASG00005021845)	LIPT1 (ENSEASG00005032656)	TSGA10 (ENSEASG00005021864) #20	CRACDL (ENSEASG00005021887) #21	MGAT4A (ENSEASG00005000051) #22	UNC50 (ENSEASG00005000091) #23	ENSEASG00005038195 #24	INPP4A (ENSEASG00005000242) #25	CNGA3 (ENSEASG00005000259) #26	VWA3B (ENSEASG00005000306) #27	TMEM131 (ENSEASG00005000464) #28	ZAP70 (ENSEASG00005001294) #29	ENSEASG00005038025	C2orf92 (ENSEASG00005030793) #30	ACTR1B (ENSEASG00005001298) #31	COX5B (ENSEASG00005038078) #32	FAM178B (ENSEASG00005001325) #33	SEMA4C (ENSEASG00005001335) #35	ANKRD39 (ENSEASG00005024689) #36	ANKRD23 (ENSEASG00005001349) #37
Horse	MODERN SPECIES	6	LONRF2 (ENSECAG00000020030)	ENSECAG00000044204	ENSECAG00000054214	AFF3 (ENSECAG00000006249)	REV1 (ENSECAG00000007804)	EIF5B (ENSECAG00000000102)	TXNDC9 (ENSECAG00000003510)	LYG1 (ENSECAG00000008543)	LYG2 (ENSECAG00000009894)	MRPL30 (ENSECAG00000015993)	MITD1 (ENSECAG00000016191)	LIPT1 (ENSECAG00000044640)	TSGA10 (ENSECAG00000019055) #20	ENSECAG00000059714	CRACDL (ENSECAG00000015337) #21	MGAT4A (ENSECAG00000015468) #22	INPP4A (ENSECAG00000004289) #25	COA5 (ENSECAG00000046355) #24	ENSECAG00000054963	CNGA3 (ENSECAG00000011274) #26	VWA3B (ENSECAG00000016966) #27	TMEM131 (ENSECAG00000007945) #28	ZAP70 (ENSECAG00000011012) #29	ENSECAG00000050105	ACTR1B (ENSECAG00000002758) #31	COX5B (ENSECAG00000007968) #32	SEMA4C (ENSECAG00000016202) #35	ANKRD39 (ENSECAG00000000103) #36	ANKRD23 (ENSECAG00000005632) #37	CNNM3 (ENSECAG00000057722)	CNNM4 (ENSECAG00000010501)
Chiroptera	ANCESTRAL SPECIES	47	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102	ENSGT00940000156317
Microchiroptera	ANCESTRAL SPECIES	49	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00390000000424	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27	ENSGT00530000063614.a.a #28	ENSGT00940000159185 #29	ENSGT00940000161587 #31	ENSGT00390000011010.b #32	ENSGT00530000064017.b #33	ENSGT00940000159885 #35	ENSGT00940000160547 #36	ENSGT00940000161920 #37	ENSGT00940000161102	ENSGT00940000156317
Microbat	MODERN SPECIES	1147						LYG2 (ENSMLUG00000015025)	ENSMLUG00000030127	TXNDC9 (ENSMLUG00000008110)	EIF5B (ENSMLUG00000008119)	REV1 (ENSMLUG00000008175)	AFF3 (ENSMLUG00000015255)	ENSMLUG00000002688	ENSMLUG00000029704 #20	ENSMLUG00000002184 #20	CRACDL (ENSMLUG00000005403) #21	MGAT4A (ENSMLUG00000013171) #22	UNC50 (ENSMLUG00000003823) #23	COA5 (ENSMLUG00000013167) #24	INPP4A (ENSMLUG00000013146) #25	ENSMLUG00000013140	VWA3B (ENSMLUG00000001737) #27	TMEM131 (ENSMLUG00000011729) #28	RIC8A (ENSMLUG00000023901)
Greater horseshoe bat	MODERN SPECIES	4	NPAS2 (ENSRFEG00010021944)	PDCL3 (ENSRFEG00010021952)	CHST10 (ENSRFEG00010021958)	AFF3 (ENSRFEG00010021968)	REV1 (ENSRFEG00010021974)	EIF5B (ENSRFEG00010021979)	TXNDC9 (ENSRFEG00010021985)	LYG1 (ENSRFEG00010021987)	MRPL30 (ENSRFEG00010021991)	MITD1 (ENSRFEG00010021992)	LIPT1 (ENSRFEG00010005808)	C2orf15 (ENSRFEG00010005841)	TSGA10 (ENSRFEG00010005878) #20	CRACDL (ENSRFEG00010005911) #21	ENSRFEG00010005951	MGAT4A (ENSRFEG00010006062) #22	UNC50 (ENSRFEG00010006181) #23	COA5 (ENSRFEG00010006223) #24	ENSRFEG00010006254	INPP4A (ENSRFEG00010006339) #25	CNGA3 (ENSRFEG00010006744) #26	GCC2 (ENSRFEG00010006801)	ENSRFEG00010006904	ENSRFEG00010007140	ENSRFEG00010007236	ENSRFEG00010007279	CCDC138 (ENSRFEG00010007307)	EDAR (ENSRFEG00010007373)	SH3RF3 (ENSRFEG00010007589)	SEPTIN10 (ENSRFEG00010007718)	SOWAHC (ENSRFEG00010007858)
Megabat	MODERN SPECIES	612																MGAT4A (ENSPVAG00000001580) #22	UNC50 (ENSPVAG00000001579) #23	COA5 (ENSPVAG00000001578) #24	INPP4A (ENSPVAG00000001576) #25
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000159177 #22
Common shrew	MODERN SPECIES	5000																MGAT4A (ENSSARG00000013787) #22
Hedgehog	MODERN SPECIES	6544																MGAT4A (ENSEEUG00000001608) #22
Atlantogenata	ANCESTRAL SPECIES	39	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27
Afrotheria	ANCESTRAL SPECIES	138	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27
Afrotheria_a	ANCESTRAL SPECIES	144	ENSGT00940000160744	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000158737 #26	ENSGT00940000157237 #27
Hyrax	MODERN SPECIES	5799																ENSPCAG00000002071 #22
Elephant	MODERN SPECIES	278	PDCL3 (ENSLAFG00000021615)	NMS (ENSLAFG00000029888)	CHST10 (ENSLAFG00000005461)	LONRF2 (ENSLAFG00000005456)	ENSLAFG00000026678	AFF3 (ENSLAFG00000012884)	REV1 (ENSLAFG00000006217)	EIF5B (ENSLAFG00000006209)	TXNDC9 (ENSLAFG00000006204)	LYG1 (ENSLAFG00000016638)	LYG2 (ENSLAFG00000018173)	MITD1 (ENSLAFG00000022556)	MRPL30 (ENSLAFG00000008151)	TSGA10 (ENSLAFG00000006643) #20	ENSLAFG00000004676 #21	MGAT4A (ENSLAFG00000016394) #22	UNC50 (ENSLAFG00000016385) #23	COA5 (ENSLAFG00000016382) #24	INPP4A (ENSLAFG00000016369) #25	CNGA3 (ENSLAFG00000001622) #26	ENSLAFG00000016110 #27	ENSLAFG00000026434 #27
Tenrec	MODERN SPECIES	7405																MGAT4A (ENSETEG00000013630) #22	UNC50 (ENSETEG00000013629) #23	COA5 (ENSETEG00000013626) #24
Xenarthra	ANCESTRAL SPECIES	713												ENSGT00390000016769	ENSGT00390000010868	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00940000157360 #25
Armadillo	MODERN SPECIES	3245												ENSDNOG00000018648	MITD1 (ENSDNOG00000018645)	TSGA10 (ENSDNOG00000009129) #20	ENSDNOG00000042937 #21	MGAT4A (ENSDNOG00000011602) #22	UNC50 (ENSDNOG00000011597) #23	INPP4A (ENSDNOG00000023720) #25
Sloth	MODERN SPECIES	6121																MGAT4A (ENSCHOG00000007608) #22
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00940000154295	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237 #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000157240.l	ENSGT00940000159067
Opossum	MODERN SPECIES	6	PDCL3 (ENSMODG00000001489)	ENSMODG00000033369	CHST10 (ENSMODG00000043193)	LONRF2 (ENSMODG00000001472)	ENSMODG00000027810	REV1 (ENSMODG00000001409)	EIF5B (ENSMODG00000001387)	TXNDC9 (ENSMODG00000048457)	LYG1 (ENSMODG00000001347)	LYG2 (ENSMODG00000001337)	MITD1 (ENSMODG00000001332)	LIPT1 (ENSMODG00000025266)	TSGA10 (ENSMODG00000001318) #20	ENSMODG00000048504	ENSMODG00000001246 #21	MGAT4A (ENSMODG00000001241) #22	UNC50 (ENSMODG00000001209) #23	COA5 (ENSMODG00000044911) #24	ENSMODG00000040358	INPP4A (ENSMODG00000001182) #25	ENSMODG00000001080	TMEM131 (ENSMODG00000001070) #28	ENSMODG00000046045	ENSMODG00000050268	ENSMODG00000001020 #27	CNGA3 (ENSMODG00000001004) #26	ENSMODG00000000978	UBE3A (ENSMODG00000000974)	ATP10A (ENSMODG00000000935)	ENSMODG00000000904	GABRB3 (ENSMODG00000046193)
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00940000154295	ENSGT01020000230360.c.b.b	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275.a	ENSGT00940000164275.b	ENSGT00530000063614.a.a #28	ENSGT00940000157237.nb.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00950000182994.A.n.a.f	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b
Tasmanian devil	MODERN SPECIES	2	PDCL3 (ENSSHAG00000030938)	ENSSHAG00000006076	CHST10 (ENSSHAG00000027256)	LONRF2 (ENSSHAG00000032178)	AFF3 (ENSSHAG00000031467)	REV1 (ENSSHAG00000010618)	EIF5B (ENSSHAG00000010146)	TXNDC9 (ENSSHAG00000021139)	LYG1 (ENSSHAG00000009480)	LYG2 (ENSSHAG00000020738)	MITD1 (ENSSHAG00000008769)	LIPT1 (ENSSHAG00000008755)	MRPL30 (ENSSHAG00000022702)	TSGA10 (ENSSHAG00000007532) #20	ENSSHAG00000020964 #21	ENSSHAG00000009275 #22	ENSSHAG00000009215 #23	ENSSHAG00000006648	ENSSHAG00000026344	ENSSHAG00000003652 #28	ENSSHAG00000004774	ENSSHAG00000005377 #27	ENSSHAG00000025674 #27	ENSSHAG00000010730 #26	ENSSHAG00000009977	ENSSHAG00000005271	ENSSHAG00000010315	GABRB3 (ENSSHAG00000026028)	GABRA5 (ENSSHAG00000026082)	ENSSHAG00000004573	ENSSHAG00000003167
Diprotodontia	ANCESTRAL SPECIES	32	ENSGT00940000154295	ENSGT01020000230360.c.b.b	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275.a	ENSGT00940000164275.b	ENSGT00530000063614.a.a #28	ENSGT00940000157237.nb.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00950000182994.A.n.a.f	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b
Diprotodontia_a	ANCESTRAL SPECIES	31	ENSGT00940000154295	ENSGT01020000230360.c.b.b	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.j	ENSGT00390000017614.i	ENSGT00390000016769	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275.a	ENSGT00940000164275.b	ENSGT00530000063614.a.a #28	ENSGT00940000157237.nb.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00950000182994.A.n.a.f	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b
koala	MODERN SPECIES	48	PDCL3 (ENSPCIG00000023761)	ENSPCIG00000033549	CHST10 (ENSPCIG00000036555)	LONRF2 (ENSPCIG00000013831)	AFF3 (ENSPCIG00000013816)	REV1 (ENSPCIG00000013804)	EIF5B (ENSPCIG00000011603)	TXNDC9 (ENSPCIG00000011566)	ENSPCIG00000011563	LYG2 (ENSPCIG00000011558)	MRPL30 (ENSPCIG00000036345)	MITD1 (ENSPCIG00000011552)	LIPT1 (ENSPCIG00000011551)	TSGA10 (ENSPCIG00000011547) #20	ENSPCIG00000011545 #21	MGAT4A (ENSPCIG00000010309) #22	UNC50 (ENSPCIG00000010302) #23	COA5 (ENSPCIG00000010301) #24	INPP4A (ENSPCIG00000006811) #25	ENSPCIG00000006766	TMEM131 (ENSPCIG00000006758) #28	ENSPCIG00000006751 #27	CNGA3 (ENSPCIG00000006747) #26	UBE3A (ENSPCIG00000006746)	ATP10A (ENSPCIG00000025217)	ENSPCIG00000025219	GABRB3 (ENSPCIG00000015449)	GABRA5 (ENSPCIG00000019209)	ENSPCIG00000036865	ENSPCIG00000003017	ENSPCIG00000017616
Common wonbat	MODERN SPECIES	730												MITD1 (ENSVURG00010010879)	LIPT1 (ENSVURG00010010871)	TSGA10 (ENSVURG00010010856) #20	ENSVURG00010010828 #21	MGAT4A (ENSVURG00010010693) #22	UNC50 (ENSVURG00010010666) #23	COA5 (ENSVURG00010010661) #24	INPP4A (ENSVURG00010010550) #25	ENSVURG00010010522	ENSVURG00010010512	ENSVURG00010010506	TMEM131 (ENSVURG00010010444) #28	ENSVURG00010010402	ENSVURG00010010382 #27	ENSVURG00010010372 #27	CNGA3 (ENSVURG00010010358) #26	UBE3A (ENSVURG00010010345)	ATP10A (ENSVURG00010010318)	ENSVURG00010010305	GABRB3 (ENSVURG00010010127)
Wallaby	MODERN SPECIES	8269																ENSMEUG00000000390 #22
Platypus	MODERN SPECIES	6	ASMTL (ENSOANG00000011053)	ENSOANG00000030500	ENSOANG00000004012	SHOX (ENSOANG00000043800)	PPP2R3B (ENSOANG00000006685)	ENSOANG00000046318	ENSOANG00000044303	GTPBP6 (ENSOANG00000007007)	ENSOANG00000049032	ENSOANG00000048530	RGN (ENSOANG00000006692)	ENSOANG00000006696	ENSOANG00000039380	RP2 (ENSOANG00000009198)	SLC9A7 (ENSOANG00000012098)	MGAT4A (ENSOANG00000007631) #22	UNC50 (ENSOANG00000048224) #23	ENSOANG00000044796 #24	ENSOANG00000039216	INPP4A (ENSOANG00000042780) #25	ENSOANG00000042842	ENSOANG00000038604	ENSOANG00000046669	MITD1 (ENSOANG00000049197)	ENSOANG00000047728
Sauria	ANCESTRAL SPECIES	2	ENSGT00940000156374	ENSGT00940000162583	ENSGT01010000223793	ENSGT00940000163243	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a	ENSGT00390000016769	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00960000191142	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT01010000222692	ENSGT00940000157237.b.b #27	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00910000148238	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607
Lepidosauria	ANCESTRAL SPECIES	4	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT01010000223793	ENSGT00940000163243	ENSGT00390000015645	ENSGT00390000017614.k.a	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00960000191142	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00910000148238	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b
Episquamata	ANCESTRAL SPECIES	2	ENSGT01060000250476	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT01010000223793	ENSGT00940000163243	ENSGT00390000015645	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00960000191142	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895.b	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000157128	ENSGT01060000250476	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT01010000223793	ENSGT00940000163243	ENSGT00390000015645	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895.b	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067
Elapidae	ANCESTRAL SPECIES	13	ENSGT00940000157128	ENSGT01060000250476	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT01010000223793	ENSGT00940000163243	ENSGT00390000015645	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205.f #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895.b	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067
Elapidae_a	ANCESTRAL SPECIES	16	ENSGT00940000153118.eb.p	ENSGT00510000049213	ENSGT00940000157128	ENSGT01060000250476	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205.f #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895.b	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067
Acanthophiinae	DUPLICATION
Acanthophiinae	ANCESTRAL SPECIES	21	ENSGT00940000154295	ENSGT00940000153118.eb.p	ENSGT00940000157128	ENSGT01060000250476	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205.f #20	ENSGT00940000161984 #21	ENSGT00940000159177.a #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895.b	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067
Eastern brown snake	MODERN SPECIES	35	ENSPTXG00000002156	CHST10 (ENSPTXG00000002152)	LONRF2 (ENSPTXG00000002148)	AFF3 (ENSPTXG00000002139)	REV1 (ENSPTXG00000002130)	EIF5B (ENSPTXG00000002121)	TXNDC9 (ENSPTXG00000002119)	ENSPTXG00000002116	ENSPTXG00000002112	ENSPTXG00000002111	MITD1 (ENSPTXG00000002107)	LIPT1 (ENSPTXG00000002104)	ENSPTXG00000002101 #20	ENSPTXG00000002098 #20	CRACDL (ENSPTXG00000002094) #21	MGAT4A (ENSPTXG00000002090) #22	UNC50 (ENSPTXG00000002089) #23	COA5 (ENSPTXG00000002088) #24	INPP4A (ENSPTXG00000002086) #25	ENSPTXG00000002085	ENSPTXG00000002084 #28	ENSPTXG00000002082 #28	ENSPTXG00000002064 #27	ENSPTXG00000002058 #27	ENSPTXG00000002056 #27	CNGA3 (ENSPTXG00000002053) #26	UBE3A (ENSPTXG00000002050)	ATP10A (ENSPTXG00000002047)	GABRB3 (ENSPTXG00000002021)	GABRA5 (ENSPTXG00000002016)	GABRG3 (ENSPTXG00000001924)
Mainland tiger snake	MODERN SPECIES	2854																ENSNSUG00000000315 #22
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00940000159177.b #22
Mainland tiger snake	MODERN SPECIES	17	PDCL3 (ENSNSUG00000002289)	ENSNSUG00000002291	CHST10 (ENSNSUG00000002292)	ENSNSUG00000002300	ENSNSUG00000002305	AFF3 (ENSNSUG00000002309)	REV1 (ENSNSUG00000002316)	EIF5B (ENSNSUG00000002552)	TXNDC9 (ENSNSUG00000002553)	ENSNSUG00000002554	ENSNSUG00000002556	MITD1 (ENSNSUG00000002558)	LIPT1 (ENSNSUG00000002559)	TSGA10 (ENSNSUG00000002560) #20	CRACDL (ENSNSUG00000002562) #21	ENSNSUG00000002569 #22	UNC50 (ENSNSUG00000002571) #23	COA5 (ENSNSUG00000002574) #24	INPP4A (ENSNSUG00000002576) #25	ENSNSUG00000002586	TMEM131 (ENSNSUG00000002589) #28	ENSNSUG00000003303 #27	ENSNSUG00000003308 #27	CNGA3 (ENSNSUG00000003311) #26	UBE3A (ENSNSUG00000003312)	ATP10A (ENSNSUG00000003315)	GABRB3 (ENSNSUG00000004639)	ENSNSUG00000004651	GABRA5 (ENSNSUG00000004656)	GABRG3 (ENSNSUG00000004698)	OCA2 (ENSNSUG00000004716)
Indian cobra	MODERN SPECIES	5	PDCL3 (ENSNNAG00000017634)	ENSNNAG00000017631	CHST10 (ENSNNAG00000017622)	LONRF2 (ENSNNAG00000017613)	AFF3 (ENSNNAG00000017584)	REV1 (ENSNNAG00000017565)	EIF5B (ENSNNAG00000017277)	ENSNNAG00000017234	TXNDC9 (ENSNNAG00000017226)	ENSNNAG00000017222	ENSNNAG00000017218	MITD1 (ENSNNAG00000017212)	LIPT1 (ENSNNAG00000017210)	TSGA10 (ENSNNAG00000017177) #20	CRACDL (ENSNNAG00000017169) #21	MGAT4A (ENSNNAG00000017148) #22	UNC50 (ENSNNAG00000017144) #23	COA5 (ENSNNAG00000017142) #24	INPP4A (ENSNNAG00000017118) #25	TMEM131 (ENSNNAG00000017031) #28	ENSNNAG00000017016	ENSNNAG00000016990 #27	ENSNNAG00000016975 #27	CNGA3 (ENSNNAG00000016966) #26	UBE3A (ENSNNAG00000016958)	ATP10A (ENSNNAG00000016928)	GABRB3 (ENSNNAG00000016868)	GABRA5 (ENSNNAG00000016844)	GABRG3 (ENSNNAG00000016832)	OCA2 (ENSNNAG00000016797)	HERC2 (ENSNNAG00000013786)
Lizard	MODERN SPECIES	2	SLC5A7 (ENSACAG00000002426)	ENSACAG00000039825	st6gal2 (ENSACAG00000002478)	ENSACAG00000002506	UXS1 (ENSACAG00000010496)	ECRG4 (ENSACAG00000010485)	ENSACAG00000037607	NCK2 (ENSACAG00000010466)	ENSACAG00000039497	ENSACAG00000041434	FHL2 (ENSACAG00000040544)	C2orf49 (ENSACAG00000045073)	TGFBRAP1 (ENSACAG00000010331)	GPR45 (ENSACAG00000010329)	ENSACAG00000029057 #21	MGAT4A (ENSACAG00000012692) #22	UNC50 (ENSACAG00000012664) #23	COA5 (ENSACAG00000042310) #24	INPP4A (ENSACAG00000012423) #25	ENSACAG00000036115	TMEM131 (ENSACAG00000012281) #28	ENSACAG00000040740	ENSACAG00000006018	ENSACAG00000039194	ENSACAG00000012250 #27	CNGA3 (ENSACAG00000012148) #26	UBE3A (ENSACAG00000012036)	ATP10A (ENSACAG00000011809)	GABRB3 (ENSACAG00000011617)	ENSACAG00000035603	GABRA5 (ENSACAG00000011363)
Laterata	ANCESTRAL SPECIES		ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00940000163243	ENSGT00390000015645	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00960000191142	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895.a.a	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975
Common wall lizard	MODERN SPECIES	12	PDCL3 (ENSPMRG00000005817)	ENSPMRG00000005807	ENSPMRG00000005803	CHST10 (ENSPMRG00000005797)	LONRF2 (ENSPMRG00000005782)	ENSPMRG00000005745	REV1 (ENSPMRG00000005703)	ENSPMRG00000005665	TXNDC9 (ENSPMRG00000005656)	ENSPMRG00000005647	MITD1 (ENSPMRG00000005642)	LIPT1 (ENSPMRG00000005637)	ENSPMRG00000005634	TSGA10 (ENSPMRG00000005576) #20	CRACDL (ENSPMRG00000005563) #21	MGAT4A (ENSPMRG00000005556) #22	UNC50 (ENSPMRG00000005543) #23	COA5 (ENSPMRG00000005538) #24	INPP4A (ENSPMRG00000005512) #25	ENSPMRG00000005500	TMEM131 (ENSPMRG00000005478) #28	ENSPMRG00000005469	ENSPMRG00000005465 #27	ENSPMRG00000005459 #27	ENSPMRG00000005454 #27	CNGA3 (ENSPMRG00000005449) #26	UBE3A (ENSPMRG00000005438)	ENSPMRG00000005430	ENSPMRG00000005420	ENSPMRG00000005414	GABRB3 (ENSPMRG00000005399)
Argentine black and white tegu	MODERN SPECIES		NMS (ENSSMRG00000021515)	CHST10 (ENSSMRG00000021516)	LONRF2 (ENSSMRG00000021517)	AFF3 (ENSSMRG00000021518)	REV1 (ENSSMRG00000021519)	EIF5B (ENSSMRG00000021520)	ENSSMRG00000021613	ENSSMRG00000021614	TXNDC9 (ENSSMRG00000021615)	ENSSMRG00000021616	ENSSMRG00000021617	MITD1 (ENSSMRG00000021618)	LIPT1 (ENSSMRG00000021619)	TSGA10 (ENSSMRG00000021620) #20	CRACDL (ENSSMRG00000021621) #21	MGAT4A (ENSSMRG00000021622) #22	UNC50 (ENSSMRG00000021623) #23	COA5 (ENSSMRG00000021625) #24	INPP4A (ENSSMRG00000021626) #25	ENSSMRG00000021627	TMEM131 (ENSSMRG00000021628) #28	ENSSMRG00000022107 #27	ENSSMRG00000022108	ENSSMRG00000022110 #27	CNGA3 (ENSSMRG00000022111) #26	UBE3A (ENSSMRG00000022112)	ATP10A (ENSSMRG00000022113)	GABRB3 (ENSSMRG00000022117)	GABRA5 (ENSSMRG00000022118)	ENSSMRG00000022125	ENSSMRG00000022127
tuatara	MODERN SPECIES	1206																MGAT4A (ENSSPUG00000007277) #22	UNC50 (ENSSPUG00000007299) #23	COA5 (ENSSPUG00000007313) #24	INPP4A (ENSSPUG00000007352) #25	ENSSPUG00000007387	TMEM131 (ENSSPUG00000007445) #28	ENSSPUG00000007469	ENSSPUG00000007474	ENSSPUG00000007482 #27	ENSSPUG00000007497 #27	CNGA3 (ENSSPUG00000007531) #26	ENSSPUG00000007547	UBE3A (ENSSPUG00000007559)	ATP10A (ENSSPUG00000007591)
Archelosauria	ANCESTRAL SPECIES		ENSGT00950000182974.a.a.a.b.p	ENSGT00950000182974.a.a.a.b.o.b	ENSGT00950000182974.a.a.a.b.o.a	ENSGT00940000156374	ENSGT00940000162583	ENSGT01010000223793	ENSGT00940000163243	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00960000191142	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975
Archosauria	ANCESTRAL SPECIES	2	ENSGT00950000182974.a.a.a.b.o.a	ENSGT00950000182974.a.a.a.b.p	ENSGT00940000156374	ENSGT00940000162583	ENSGT01010000223793	ENSGT00940000163243	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a.a	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067
Aves	ANCESTRAL SPECIES		ENSGT00950000182974.a.a.a.b.p	ENSGT00940000156374	ENSGT00940000162583	ENSGT01010000223793	ENSGT00940000163243	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a.a	ENSGT00390000017614.k.b	ENSGT00390000016769	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067
Neognathae	ANCESTRAL SPECIES	1	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b.p	ENSGT00940000156374	ENSGT00940000162583	ENSGT01010000223793	ENSGT00940000163243	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a.a	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT01010000222692	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00950000182974.a.a.a.b.p	ENSGT00940000156374	ENSGT00940000162583	ENSGT01010000223793	ENSGT00940000163243	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a.a	ENSGT00390000017614.k.b	ENSGT00390000016769	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Anatidae	ANCESTRAL SPECIES	32	ENSGT00950000182974.a.a.a.b.o.b	ENSGT00950000182974.a.a.a.b.p	ENSGT00940000156374	ENSGT00940000162583	ENSGT01010000223793	ENSGT00940000163243	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a.a	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Pink-footed goose	MODERN SPECIES	46				AFF3 (ENSABRG00000009124)	REV1 (ENSABRG00000009389)	ENSABRG00000010186	TXNDC9 (ENSABRG00000010358)	ENSABRG00000010364	ENSABRG00000010384	ENSABRG00000010396	ENSABRG00000010405	MITD1 (ENSABRG00000010414)	LIPT1 (ENSABRG00000010430)	TSGA10 (ENSABRG00000010450) #20	CRACDL (ENSABRG00000010505) #21	MGAT4A (ENSABRG00000010545) #22	UNC50 (ENSABRG00000010789) #23	COA5 (ENSABRG00000010800) #24	INPP4A (ENSABRG00000010938) #25	TMEM131 (ENSABRG00000013101) #28	VWA3B (ENSABRG00000013688) #27	CNGA3 (ENSABRG00000013738) #26	UBE3A (ENSABRG00000013750)	ATP10A (ENSABRG00000013767)	GABRB3 (ENSABRG00000013802)	GABRA5 (ENSABRG00000013815)	GABRG3 (ENSABRG00000013832)	OCA2 (ENSABRG00000013852)	HERC2 (ENSABRG00000014064)	ENSABRG00000015351	ENSABRG00000015357
Duck	MODERN SPECIES		LONRF2 (ENSAPLG00000016120)	ENSAPLG00000016085	ENSAPLG00000017317	ENSAPLG00000016080	REV1 (ENSAPLG00000015629)	EIF5B (ENSAPLG00000015401)	ENSAPLG00000029632	TXNDC9 (ENSAPLG00000015346)	ENSAPLG00000028621	ENSAPLG00000015164	MITD1 (ENSAPLG00000014881)	LIPT1 (ENSAPLG00000001991)	ENSAPLG00000023503 #20	ENSAPLG00000014805 #20	CRACDL (ENSAPLG00000014720) #21	MGAT4A (ENSAPLG00000014270) #22	UNC50 (ENSAPLG00000026135) #23	COA5 (ENSAPLG00000025469) #24	INPP4A (ENSAPLG00000006583) #25	TMEM131 (ENSAPLG00000015123) #28	VWA3B (ENSAPLG00000015715) #27	CNGA3 (ENSAPLG00000014458) #26	ENSAPLG00000020267	UBE3A (ENSAPLG00000014628)	ATP10A (ENSAPLG00000014775)	GABRB3 (ENSAPLG00000015446)	GABRA5 (ENSAPLG00000015626)	GABRG3 (ENSAPLG00000002598)	OCA2 (ENSAPLG00000002607)	HERC2 (ENSAPLG00000003410)	NIPA1 (ENSAPLG00000005169)
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b.p	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a.a	ENSGT00390000017614.k.b	ENSGT00390000016769	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00940000173424	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b.p	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a.a	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067	ENSGT00940000155651
Turkey	MODERN SPECIES		IL1R2 (ENSMGAG00000014807)	MAP4K4 (ENSMGAG00000014806)	RFX8 (ENSMGAG00000014805)	CREG2 (ENSMGAG00000014804)	RNF149 (ENSMGAG00000014803)	CNOT11 (ENSMGAG00000014802)	TBC1D8 (ENSMGAG00000014801)	ENSMGAG00000014800	NPAS2 (ENSMGAG00000014799)	ENSMGAG00000015504	ENSMGAG00000015501	ENSMGAG00000021378	TSGA10 (ENSMGAG00000014784) #20	PDCL3 (ENSMGAG00000014798)	CRACDL (ENSMGAG00000014783) #21	MGAT4A (ENSMGAG00000014782) #22	UNC50 (ENSMGAG00000020765) #23	COA5 (ENSMGAG00000022502) #24	INPP4A (ENSMGAG00000014779) #25	TMEM131 (ENSMGAG00000014778) #28	ENSMGAG00000014775 #27	CNGA3 (ENSMGAG00000014773) #26	UBE3A (ENSMGAG00000014772)	ATP10A (ENSMGAG00000014771)	GABRB3 (ENSMGAG00000014769)	GABRA5 (ENSMGAG00000014768)	ENSMGAG00000020779	ENSMGAG00000016583	ENSMGAG00000014729	MXRA5 (ENSMGAG00000014730)	ENSMGAG00000021355
Chicken	MODERN SPECIES		NMS (ENSGALG00010015933)	CHST10 (ENSGALG00010015913)	LONRF2 (ENSGALG00010015896)	AFF3 (ENSGALG00010015886)	REV1 (ENSGALG00010015877)	EIF5B (ENSGALG00010015870)	TXNDC9 (ENSGALG00010015856)	ENSGALG00010015850	LYG2 (ENSGALG00010015831)	ENSGALG00010015820	MITD1 (ENSGALG00010015816)	LIPT1 (ENSGALG00010015810)	ENSGALG00010015813	TSGA10 (ENSGALG00010015772) #20	CRACDL (ENSGALG00010015738) #21	MGAT4A (ENSGALG00010015716) #22	UNC50 (ENSGALG00010015701) #23	COA5 (ENSGALG00010015693)	INPP4A (ENSGALG00010015669) #25	TMEM131 (ENSGALG00010015606) #28	VWA3B (ENSGALG00010015551) #27	CNGA3 (ENSGALG00010015542)	UBE3A (ENSGALG00010015520)	ATP10A (ENSGALG00010015992)	GABRB3 (ENSGALG00010002942)	GABRA5 (ENSGALG00010002927)	GABRG3 (ENSGALG00010002907)	OCA2 (ENSGALG00010002896)	HERC2 (ENSGALG00010002886)	ENSGALG00010002421	ENSGALG00010003280
Japanese quail	MODERN SPECIES		CHST10 (ENSCJPG00005001255)	LONRF2 (ENSCJPG00005001247)	AFF3 (ENSCJPG00005001212)	REV1 (ENSCJPG00005001170)	ENSCJPG00005000426	TXNDC9 (ENSCJPG00005000391)	ENSCJPG00005000386	ENSCJPG00005000381	ENSCJPG00005000181	MRPL30 (ENSCJPG00005000160)	ENSCJPG00005000152	MITD1 (ENSCJPG00005000145)	LIPT1 (ENSCJPG00005000139)	TSGA10 (ENSCJPG00005000126) #20	CRACDL (ENSCJPG00005000108) #21	MGAT4A (ENSCJPG00005000086) #22	UNC50 (ENSCJPG00005000046) #23	COA5 (ENSCJPG00005019748) #24	INPP4A (ENSCJPG00005019746) #25	TMEM131 (ENSCJPG00005019703) #28	VWA3B (ENSCJPG00005019700) #27	ENSCJPG00005019699	UBE3A (ENSCJPG00005019696)	ATP10A (ENSCJPG00005019695)	GABRB3 (ENSCJPG00005019691)	GABRA5 (ENSCJPG00005019690)	GABRG3 (ENSCJPG00005019689)	OCA2 (ENSCJPG00005019660)	HERC2 (ENSCJPG00005019456)	NIPA1 (ENSCJPG00005019424)	NIPA2 (ENSCJPG00005019415)
Neognathae_b	ANCESTRAL SPECIES		ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b.p	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a.a	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067
Neognathae_c	ANCESTRAL SPECIES	4	ENSGT00940000173424	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b.p	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a.a	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT01010000222692	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975
Golden eagle	MODERN SPECIES	15	CHST10 (ENSACCG00020014786)	LONRF2 (ENSACCG00020014815)	AFF3 (ENSACCG00020014878)	REV1 (ENSACCG00020014922)	EIF5B (ENSACCG00020014990)	TXNDC9 (ENSACCG00020015018)	ENSACCG00020015046	ENSACCG00020015074	ENSACCG00020015084	ENSACCG00020015102	MITD1 (ENSACCG00020015139)	LIPT1 (ENSACCG00020015167)	ENSACCG00020015176 #20	ENSACCG00020015184 #20	CRACDL (ENSACCG00020015203) #21	MGAT4A (ENSACCG00020015221) #22	UNC50 (ENSACCG00020015240) #23	COA5 (ENSACCG00020015258) #24	INPP4A (ENSACCG00020015303) #25	TMEM131 (ENSACCG00020015377) #28	ENSACCG00020015426 #27	ENSACCG00020015439 #27	CNGA3 (ENSACCG00020015457) #26	UBE3A (ENSACCG00020015473)	ENSACCG00020015598	ENSACCG00020015680	ENSACCG00020015726	GABRB3 (ENSACCG00020015759)	GABRA5 (ENSACCG00020015771)	GABRG3 (ENSACCG00020015807)	OCA2 (ENSACCG00020016025)
Kakapo	MODERN SPECIES	11	ENSSHBG00005014470	ENSSHBG00005014462	ENSSHBG00005014454	CHST10 (ENSSHBG00005014448)	LONRF2 (ENSSHBG00005014441)	AFF3 (ENSSHBG00005014423)	REV1 (ENSSHBG00005014409)	EIF5B (ENSSHBG00005014392)	TXNDC9 (ENSSHBG00005014384)	ENSSHBG00005014372	ENSSHBG00005014359	MITD1 (ENSSHBG00005014341)	LIPT1 (ENSSHBG00005014332)	ENSSHBG00005014324 #20	CRACDL (ENSSHBG00005014264) #21	MGAT4A (ENSSHBG00005014247) #22	UNC50 (ENSSHBG00005014231) #23	COA5 (ENSSHBG00005014224) #24	INPP4A (ENSSHBG00005014212) #25	TMEM131 (ENSSHBG00005014195) #28	ENSSHBG00005014184	ENSSHBG00005014170 #27	ENSSHBG00005014163	CNGA3 (ENSSHBG00005014157) #26	UBE3A (ENSSHBG00005014128)	ATP10A (ENSSHBG00005014010)	GABRB3 (ENSSHBG00005013964)	GABRA5 (ENSSHBG00005013949)	GABRG3 (ENSSHBG00005013909)	OCA2 (ENSSHBG00005013816)	HERC2 (ENSSHBG00005013706)
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00940000153118.eb	ENSGT00940000173424	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b.p	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067
Great tit	MODERN SPECIES		NPAS2 (ENSPMJG00000015190)	PDCL3 (ENSPMJG00000015192)	ENSPMJG00000015193	ENSPMJG00000015194	CHST10 (ENSPMJG00000015195)	LONRF2 (ENSPMJG00000015196)	AFF3 (ENSPMJG00000015197)	REV1 (ENSPMJG00000015231)	EIF5B (ENSPMJG00000015232)	TXNDC9 (ENSPMJG00000015233)	ENSPMJG00000015234	ENSPMJG00000015235	MITD1 (ENSPMJG00000015236)	LIPT1 (ENSPMJG00000015237)	CRACDL (ENSPMJG00000015238) #21	MGAT4A (ENSPMJG00000015239) #22	UNC50 (ENSPMJG00000015240) #23	COA5 (ENSPMJG00000015241) #24	INPP4A (ENSPMJG00000015242) #25	TMEM131 (ENSPMJG00000015243) #28	ENSPMJG00000015246 #27	ENSPMJG00000015247 #27	CNGA3 (ENSPMJG00000015248) #26	UBE3A (ENSPMJG00000015249)	ENSPMJG00000015250	ATP10A (ENSPMJG00000015251)	GABRB3 (ENSPMJG00000015253)	GABRA5 (ENSPMJG00000015254)	GABRG3 (ENSPMJG00000015255)	OCA2 (ENSPMJG00000015257)	HERC2 (ENSPMJG00000015438)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00940000153118.eb	ENSGT00940000173424	ENSGT00510000049213	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b.p	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT01010000222692	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975
Passeriformes_g	ANCESTRAL SPECIES	2	ENSGT00940000154295	ENSGT00940000153118.eb	ENSGT00940000173424	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b.p	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT01010000222692	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975
Medium ground finch	MODERN SPECIES	18	PDCL3 (ENSGFOG00000008641)	ENSGFOG00000008644	ENSGFOG00000008650	CHST10 (ENSGFOG00000008655)	LONRF2 (ENSGFOG00000008664)	AFF3 (ENSGFOG00000008681)	REV1 (ENSGFOG00000008714)	ENSGFOG00000008749	TXNDC9 (ENSGFOG00000008919)	ENSGFOG00000008932	ENSGFOG00000008948	MITD1 (ENSGFOG00000008951)	LIPT1 (ENSGFOG00000008956)	CRACDL (ENSGFOG00000008964) #21	ENSGFOG00000008984	MGAT4A (ENSGFOG00000008991) #22	UNC50 (ENSGFOG00000009001) #23	COA5 (ENSGFOG00000009005) #24	INPP4A (ENSGFOG00000009014) #25	TMEM131 (ENSGFOG00000009049) #28	ENSGFOG00000009070	ENSGFOG00000009074 #27	CNGA3 (ENSGFOG00000009080) #26	UBE3A (ENSGFOG00000009087)
Passeroidea	ANCESTRAL SPECIES	10	ENSGT00940000154295	ENSGT00940000153118.eb	ENSGT00940000173424	ENSGT00940000157128	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b.p	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.b	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067
Zebra finch	MODERN SPECIES		ENSTGUG00000010003	PDCL3 (ENSTGUG00000010036)	ENSTGUG00000010042	ENSTGUG00000010044	CHST10 (ENSTGUG00000010047)	LONRF2 (ENSTGUG00000010057)	AFF3 (ENSTGUG00000010075)	REV1 (ENSTGUG00000010082)	EIF5B (ENSTGUG00000010099)	TXNDC9 (ENSTGUG00000010125)	ENSTGUG00000010130	ENSTGUG00000019096	ENSTGUG00000024074	MITD1 (ENSTGUG00000010137)	CRACDL (ENSTGUG00000010153) #21	MGAT4A (ENSTGUG00000010155) #22	UNC50 (ENSTGUG00000010176) #23	INPP4A (ENSTGUG00000010196) #25	TMEM131 (ENSTGUG00000010237) #28	VWA3B (ENSTGUG00000010260) #27	CNGA3 (ENSTGUG00000010272) #26	UBE3A (ENSTGUG00000010281)	ATP10A (ENSTGUG00000010310)	GABRB3 (ENSTGUG00000010346)	GABRA5 (ENSTGUG00000010368)	GABRG3 (ENSTGUG00000026960)	OCA2 (ENSTGUG00000010434)	HERC2 (ENSTGUG00000010457)	NIPA1 (ENSTGUG00000024057)	NIPA2 (ENSTGUG00000026864)	ENSTGUG00000010550
Common canary	MODERN SPECIES	4	PDCL3 (ENSSCAG00000000010)	ENSSCAG00000000007	ENSSCAG00000000005	CHST10 (ENSSCAG00000000003)	LONRF2 (ENSSCAG00000016807)	AFF3 (ENSSCAG00000016803)	REV1 (ENSSCAG00000016796)	EIF5B (ENSSCAG00000016792)	TXNDC9 (ENSSCAG00000016791)	ENSSCAG00000016789	ENSSCAG00000016788	ENSSCAG00000016786	MITD1 (ENSSCAG00000016783)	LIPT1 (ENSSCAG00000016780)	CRACDL (ENSSCAG00000016778) #21	MGAT4A (ENSSCAG00000016774) #22	UNC50 (ENSSCAG00000016772) #23	ENSSCAG00000016769 #24	INPP4A (ENSSCAG00000016767) #25	TMEM131 (ENSSCAG00000016760) #28	ENSSCAG00000016755 #27	ENSSCAG00000016751 #27	ENSSCAG00000016750	UBE3A (ENSSCAG00000016746)	ATP10A (ENSSCAG00000016722)	GABRB3 (ENSSCAG00000016695)	GABRA5 (ENSSCAG00000016681)	GABRG3 (ENSSCAG00000016667)	OCA2 (ENSSCAG00000016649)	HERC2 (ENSSCAG00000016520)	NIPA1 (ENSSCAG00000016456)
Flycatcher	MODERN SPECIES		NPAS2 (ENSFALG00000003827)	PDCL3 (ENSFALG00000025457)	ENSFALG00000014993	NMS (ENSFALG00000028879)	CHST10 (ENSFALG00000003864)	LONRF2 (ENSFALG00000003868)	AFF3 (ENSFALG00000003878)	REV1 (ENSFALG00000003890)	ENSFALG00000003920	TXNDC9 (ENSFALG00000003927)	ENSFALG00000003932	ENSFALG00000003937	MITD1 (ENSFALG00000023579)	LIPT1 (ENSFALG00000003944)	CRACDL (ENSFALG00000003947) #21	MGAT4A (ENSFALG00000003960) #22	UNC50 (ENSFALG00000003974) #23	COA5 (ENSFALG00000003977) #24	INPP4A (ENSFALG00000003979) #25	TMEM131 (ENSFALG00000003986) #28	ENSFALG00000004004 #27	CNGA3 (ENSFALG00000027942) #26	UBE3A (ENSFALG00000004019)	ATP10A (ENSFALG00000004021)	GABRB3 (ENSFALG00000026709)	GABRA5 (ENSFALG00000004030)	GABRG3 (ENSFALG00000004035)	OCA2 (ENSFALG00000004044)	HERC2 (ENSFALG00000004056)	NIPA1 (ENSFALG00000004063)	NIPA2 (ENSFALG00000023084)
African ostrich	MODERN SPECIES	318	ENSSCUG00000003073	CHST10 (ENSSCUG00000003076)	LONRF2 (ENSSCUG00000003077)	ENSSCUG00000003081	AFF3 (ENSSCUG00000003083)	REV1 (ENSSCUG00000003087)	ENSSCUG00000003121	TXNDC9 (ENSSCUG00000003165)	ENSSCUG00000003167	ENSSCUG00000003168	ENSSCUG00000003171	ENSSCUG00000003173	MITD1 (ENSSCUG00000003174)	TSGA10 (ENSSCUG00000003181) #20	CRACDL (ENSSCUG00000003185) #21	MGAT4A (ENSSCUG00000003189) #22	UNC50 (ENSSCUG00000003192) #23	INPP4A (ENSSCUG00000003197) #25	TMEM131 (ENSSCUG00000003203) #28	VWA3B (ENSSCUG00000003214) #27	CNGA3 (ENSSCUG00000003220) #26	UBE3A (ENSSCUG00000003221)	ATP10A (ENSSCUG00000003225)	GABRB3 (ENSSCUG00000003229)	GABRA5 (ENSSCUG00000003230)	GABRG3 (ENSSCUG00000003231)	OCA2 (ENSSCUG00000003232)	HERC2 (ENSSCUG00000003278)	NIPA1 (ENSSCUG00000003358)	NIPA2 (ENSSCUG00000003359)	CYFIP1 (ENSSCUG00000003360)
Australian saltwater crocodile	MODERN SPECIES	27	LONRF2 (ENSCPRG00005012229)	ENSCPRG00005012217	ENSCPRG00005012170	REV1 (ENSCPRG00005012123)	EIF5B (ENSCPRG00005012100)	TXNDC9 (ENSCPRG00005012086)	ENSCPRG00005012080	ENSCPRG00005012072	ENSCPRG00005012068	ENSCPRG00005012029	ENSCPRG00005012023	MITD1 (ENSCPRG00005012006)	LIPT1 (ENSCPRG00005012004)	TSGA10 (ENSCPRG00005011985) #20	CRACDL (ENSCPRG00005011973) #21	MGAT4A (ENSCPRG00005011963) #22	UNC50 (ENSCPRG00005011930) #23	COA5 (ENSCPRG00005011925) #24	INPP4A (ENSCPRG00005011885) #25	TMEM131 (ENSCPRG00005011822) #28	ENSCPRG00005011759 #27	ENSCPRG00005011752 #27	ENSCPRG00005011706	UBE3A (ENSCPRG00005011691)	ENSCPRG00005011606	ATP10A (ENSCPRG00005011250)	GABRB3 (ENSCPRG00005011173)	GABRA5 (ENSCPRG00005011145)	ENSCPRG00005011141	ENSCPRG00005011070	ENSCPRG00005011031
Cryptodira	ANCESTRAL SPECIES		ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b.o.b	ENSGT00950000182974.a.a.a.b.o.a	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a.b.b	ENSGT00390000017614.k.a.b.a.a	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00960000191142	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT00940000157237.b.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00950000182974.a.a.a.b.o.b	ENSGT00950000182974.a.a.a.b.o.a	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a.b.b	ENSGT00390000017614.k.a.b.a.a	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00960000191142	ENSGT00950000185362	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT00940000157237.b.a.g.b #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975
Testudinidae	ANCESTRAL SPECIES		ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a.b.b	ENSGT00390000017614.k.a.b.a.a	ENSGT00390000017614.k.a.b.a.b	ENSGT00390000016769	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00960000191142	ENSGT00950000185362	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.b #27	ENSGT00940000157237.b.a.g.b #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005019735	ENSGEVG00005019741	REV1 (ENSGEVG00005019760)	EIF5B (ENSGEVG00005019804)	TXNDC9 (ENSGEVG00005019815)	ENSGEVG00005019818	ENSGEVG00005019824	ENSGEVG00005019830	ENSGEVG00005000083	MRPL30 (ENSGEVG00005000132)	MITD1 (ENSGEVG00005000156)	LIPT1 (ENSGEVG00005000170)	TSGA10 (ENSGEVG00005000197) #20	ENSGEVG00005000259	CRACDL (ENSGEVG00005000301) #21	MGAT4A (ENSGEVG00005000411) #22	UNC50 (ENSGEVG00005000453) #23	COA5 (ENSGEVG00005000466) #24	INPP4A (ENSGEVG00005000555) #25	ENSGEVG00005000780	TMEM131 (ENSGEVG00005000834) #28	ENSGEVG00005001004 #27	ENSGEVG00005001030 #27	ENSGEVG00005001042 #27	CNGA3 (ENSGEVG00005001066) #26	UBE3A (ENSGEVG00005001094)	ATP10A (ENSGEVG00005001165)	GABRB3 (ENSGEVG00005001339)	GABRA5 (ENSGEVG00005001402)	ENSGEVG00005001435	ENSGEVG00005001503
Abingdon island giant tortoise	MODERN SPECIES	2327																MGAT4A (ENSCABG00000003117) #22	UNC50 (ENSCABG00000003123) #23	COA5 (ENSCABG00000003126) #24	INPP4A (ENSCABG00000003130) #25	ENSCABG00000003139	TMEM131 (ENSCABG00000003187) #28	ENSCABG00000004471 #27	ENSCABG00000004518	ENSCABG00000004521 #27	CNGA3 (ENSCABG00000004525) #26	UBE3A (ENSCABG00000004531)	ATP10A (ENSCABG00000004541)
Emydidae	ANCESTRAL SPECIES	30	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b.o.a	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000017614.l	ENSGT00390000017614.k.a.b.b	ENSGT00390000017614.k.a.b.a.a	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00960000191142	ENSGT00940000159205 #20	ENSGT00950000185362.a	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275	ENSGT00530000063614.a.a #28	ENSGT00940000157237.b.a.g.a #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975	ENSGT00940000159067
painted turtle	MODERN SPECIES	694	LONRF2 (ENSCPBG00000007303)	AFF3 (ENSCPBG00000007277)	REV1 (ENSCPBG00000005381)	EIF5B (ENSCPBG00000005318)	TXNDC9 (ENSCPBG00000005308)	ENSCPBG00000005294	ENSCPBG00000005258	ENSCPBG00000005234	ENSCPBG00000005225	MITD1 (ENSCPBG00000005218)	LIPT1 (ENSCPBG00000005213)	ENSCPBG00000005206	ENSCPBG00000005200	TSGA10 (ENSCPBG00000005139) #20	CRACDL (ENSCPBG00000005110) #21	MGAT4A (ENSCPBG00000005076) #22	UNC50 (ENSCPBG00000005066) #23	COA5 (ENSCPBG00000005055) #24	ENSCPBG00000005046	INPP4A (ENSCPBG00000005011) #25	ENSCPBG00000004963	TMEM131 (ENSCPBG00000004925) #28	VWA3B (ENSCPBG00000004860) #27	CNGA3 (ENSCPBG00000004839) #26	UBE3A (ENSCPBG00000004820)	ATP10A (ENSCPBG00000004793)	CNOT11 (ENSCPBG00000004780)
Three-toed box turtle	MODERN SPECIES	4	ENSTMTG00000005895	CHST10 (ENSTMTG00000005909)	ENSTMTG00000005917	AFF3 (ENSTMTG00000005930)	REV1 (ENSTMTG00000005991)	EIF5B (ENSTMTG00000006054)	TXNDC9 (ENSTMTG00000006120)	ENSTMTG00000000023	ENSTMTG00000000027	MITD1 (ENSTMTG00000000030)	LIPT1 (ENSTMTG00000000034)	ENSTMTG00000000036	TSGA10 (ENSTMTG00000000040) #20	ENSTMTG00000000043	CRACDL (ENSTMTG00000000076) #21	MGAT4A (ENSTMTG00000000103) #22	UNC50 (ENSTMTG00000000131) #23	COA5 (ENSTMTG00000000154) #24	INPP4A (ENSTMTG00000000519) #25	ENSTMTG00000001294	TMEM131 (ENSTMTG00000001335) #28	ENSTMTG00000001429
Chinese turtle	MODERN SPECIES	2209								ENSPSIG00000011657	ENSPSIG00000011650	ENSPSIG00000011579	ENSPSIG00000011557	MITD1 (ENSPSIG00000011553)	LIPT1 (ENSPSIG00000001039)	TSGA10 (ENSPSIG00000010868) #20	CRACDL (ENSPSIG00000010861) #21	MGAT4A (ENSPSIG00000009403) #22	UNC50 (ENSPSIG00000008997) #23	COA5 (ENSPSIG00000008984) #24	INPP4A (ENSPSIG00000008822) #25	ENSPSIG00000008787	TMEM131 (ENSPSIG00000017321) #28	VWA3B (ENSPSIG00000016680) #27	CNGA3 (ENSPSIG00000016436) #26	UBE3A (ENSPSIG00000016196)
Anura	ANCESTRAL SPECIES	3	ENSGT00940000157953	ENSGT00940000161271	ENSGT00940000160889	ENSGT00940000166136	ENSGT00440000033329.b.a.a	ENSGT00950000182974.a.a.a.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00390000010868	ENSGT00940000163829	ENSGT00940000155470.a	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000157360 #25	ENSGT00940000164275.c.a	ENSGT00530000063614.a.a #28	ENSGT01010000222692	ENSGT00940000157237 #27	ENSGT00940000158737 #26	ENSGT00940000155050	ENSGT00940000157895	ENSGT00940000154713.A	ENSGT00940000156234	ENSGT00940000155607	ENSGT01030000234550.b	ENSGT00940000154975
Leishan spiny toad	MODERN SPECIES	5	ENSLLEG00000015201	AFF3 (ENSLLEG00000015254)	ENSLLEG00000015649	ENSLLEG00000015672	ENSLLEG00000015731	REV1 (ENSLLEG00000000564)	ENSLLEG00000000612	EIF5B (ENSLLEG00000000628)	TXNDC9 (ENSLLEG00000000689)	MITD1 (ENSLLEG00000000740)	ENSLLEG00000000784	ENSLLEG00000000821	TSGA10 (ENSLLEG00000001181) #20	CRACDL (ENSLLEG00000001259) #21	ENSLLEG00000001293	MGAT4A (ENSLLEG00000001320) #22	UNC50 (ENSLLEG00000001403) #23	COA5 (ENSLLEG00000001426) #24	INPP4A (ENSLLEG00000001549) #25	ENSLLEG00000001912	ENSLLEG00000001947	TMEM131 (ENSLLEG00000002009) #28	ENSLLEG00000002214	ENSLLEG00000002230	ENSLLEG00000002238 #27	ENSLLEG00000002251 #27	CNGA3 (ENSLLEG00000002325) #26	UBE3A (ENSLLEG00000002514)	ENSLLEG00000002703	ENSLLEG00000002717	ATP10A (ENSLLEG00000002740)
Frog	MODERN SPECIES	2	ENSXETG00000034723	lonrf2 (ENSXETG00000013825)	aff3 (ENSXETG00000030016)	med24 (ENSXETG00000013814)	rev1 (ENSXETG00000019375)	eif5b (ENSXETG00000019377)	tm2d3 (ENSXETG00000026576)	ENSXETG00000048317	lyg2 (ENSXETG00000019374)	mitd1 (ENSXETG00000019386)	mrpl30 (ENSXETG00000026571)	abcc12 (ENSXETG00000034322)	lipt1 (ENSXETG00000019393)	tsga10 (ENSXETG00000030526) #20	cracdl (ENSXETG00000039679) #21	mgat4a (ENSXETG00000019401) #22	unc50 (ENSXETG00000026564) #23	coa5 (ENSXETG00000026562) #24	inpp4a (ENSXETG00000019407) #25	XB5727514 [provisional] (ENSXETG00000019416)	tmem131 (ENSXETG00000031570) #28	ENSXETG00000047831	vwa3b (ENSXETG00000024348) #27	cnga3 (ENSXETG00000024338) #26	ube3a (ENSXETG00000024326)	ENSXETG00000046612	atp10a (ENSXETG00000024302)	ENSXETG00000044133	gabrb3 (ENSXETG00000024288)	gabra5 (ENSXETG00000027302)	gabrg3 (ENSXETG00000041217)
Coelacanth	MODERN SPECIES	2473															ENSLACG00000001263 #21	MGAT4A (ENSLACG00000005825) #22	UNC50 (ENSLACG00000007130) #23	COA5 (ENSLACG00000007415) #24
Actinopterygii	ANCESTRAL SPECIES	125				ENSGT00440000033329.b.a.a	ENSGT00940000154295	ENSGT00940000157128	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000164275	ENSGT00940000157360 #25	ENSGT00940000156807	ENSGT00940000159390	ENSGT00390000017581.b	ENSGT00940000163665	ENSGT00940000166515	ENSGT00940000164385.a.a.a.b	ENSGT00390000011204	ENSGT00950000183001.a.b.b	ENSGT00530000063596.A.i	ENSGT00390000007488	ENSGT00950000183028.a.a.a
Neopterygii	ANCESTRAL SPECIES	15					ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00940000162583	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00940000163031.b.a	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000164275	ENSGT00940000157360 #25	ENSGT00940000156807	ENSGT00940000159390	ENSGT00390000017581.b	ENSGT00940000164385.a.a.a.b	ENSGT00390000011204	ENSGT00950000183001.a.b.b	ENSGT00530000063596.A.i	ENSGT00390000007488	ENSGT00950000183028.a.a.a	ENSGT00940000157728.a.b	ENSGT00940000157728.b
Osteoglossocephalai	ANCESTRAL SPECIES	3	ENSGT00940000157849	ENSGT00940000157874.q.b	ENSGT00940000162479.b	ENSGT00940000155360.B	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00940000163243	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000161984 #21	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000018553 #23	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360 #25	ENSGT00940000156807	ENSGT00940000159390	ENSGT00390000017581.b	ENSGT00940000164385.a.a.a.b	ENSGT00390000011204	ENSGT00950000183001.a.b.b	ENSGT00530000063596.A.i	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00950000183028.a.a.a.g.b
Clupeocephala	ANCESTRAL SPECIES	84							ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000163665	ENSGT00390000018553 #23	ENSGT00940000164275.f	ENSGT00940000157360.c #25	ENSGT00940000156807.f	ENSGT00390000017581.b.b	ENSGT00940000164385.a.a.a.b	ENSGT00390000011204	ENSGT00950000183001.a.b.b
Otomorpha	ANCESTRAL SPECIES	52	ENSGT01030000234915.b.b	ENSGT01030000234513.B.b.c	ENSGT01030000234915.a	ENSGT01050000244864.B.b.a.b	ENSGT00940000157028	ENSGT00730000111087	ENSGT00950000182974.b	ENSGT00940000155360.B.l	ENSGT00940000162479.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.b.c	ENSGT00950000183001.a.b.b.k	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.b.g.a	ENSGT00950000183028.b	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145.f
Clupeiformes	ANCESTRAL SPECIES	241	ENSGT00390000003896	ENSGT00940000155282	ENSGT00940000160335	ENSGT00940000156056.A	ENSGT00950000182910.a.a.c	ENSGT00940000155812.d	ENSGT00390000005581.b	ENSGT00390000005550	ENSGT00940000154014.b.b	ENSGT00940000155466.e.b	ENSGT00390000016484	ENSGT00390000004145.b	ENSGT00940000158493	ENSGT00530000063564.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.b.c
Atlantic herring	MODERN SPECIES	11	nabp1a (ENSCHAG00000010325)	ftcdnl1 (ENSCHAG00000010263)	zgc:153521 (ENSCHAG00000010251)	stk17b (ENSCHAG00000010215)	HECW2 (ENSCHAG00000009788)	PGAP1 (ENSCHAG00000009758)	maip1 (ENSCHAG00000009720)	tyw5 (ENSCHAG00000009690)	ENSCHAG00000009512	ackr3a (ENSCHAG00000009489)	ENSCHAG00000009459	ENSCHAG00000009416	ENSCHAG00000009389	ENSCHAG00000009305	creg2 (ENSCHAG00000009297)	ENSCHAG00000009160 #22	ENSCHAG00000009141	si:dkey-4e7.3 (ENSCHAG00000009133)	inpp4aa (ENSCHAG00000003322) #25	slc9a2 (ENSCHAG00000002326)	MFSD9 (ENSCHAG00000002289)	tmem182a (ENSCHAG00000002278)	pou3f3a (ENSCHAG00000002244)	wdr74 (ENSCHAG00000002164)	GPR45 (ENSCHAG00000002152)	ENSCHAG00000001941	mitd1 (ENSCHAG00000001865)	mrpl30 (ENSCHAG00000001850)	txndc9 (ENSCHAG00000001816)	sik1 (ENSCHAG00000001703)	cbsb (ENSCHAG00000000235)
Denticle herring	MODERN SPECIES	19	tmeff2a (ENSDCDG00000019844)	cavin2a (ENSDCDG00000019840)	nabp1a (ENSDCDG00000019837)	ftcdnl1 (ENSDCDG00000019835)	zgc:153521 (ENSDCDG00000019834)	stk17b (ENSDCDG00000019832)	HECW2 (ENSDCDG00000019742)	maip1 (ENSDCDG00000019732)	tyw5 (ENSDCDG00000019727)	ENSDCDG00000019487	nqo1 (ENSDCDG00000019412)	nqo1 (ENSDCDG00000019386)	ackr3a (ENSDCDG00000019379)	rpe (ENSDCDG00000019375)	ENSDCDG00000019368	MGAT4A (ENSDCDG00000019332) #22	coa5 (ENSDCDG00000019324) #24	si:dkey-4e7.3 (ENSDCDG00000019321)	inpp4aa (ENSDCDG00000017310) #25	MFSD9 (ENSDCDG00000017273)	ENSDCDG00000017272	FHL2 (ENSDCDG00000017270)	ENSDCDG00000017268	ENSDCDG00000017264	mmadhcb (ENSDCDG00000017260)	crygm2c (ENSDCDG00000017258)	ENSDCDG00000017256	ENSDCDG00000017254	crygm5 (ENSDCDG00000017253)	ENSDCDG00000017252	etv5a (ENSDCDG00000017179)
Otophysi	ANCESTRAL SPECIES	38	ENSGT00390000007182	ENSGT01030000234513.B.b.c	ENSGT01030000234915.a	ENSGT01050000244864.B.b.a.b	ENSGT00940000157028	ENSGT00730000111087	ENSGT00950000182974.b	ENSGT00940000155360.B.l	ENSGT00940000162479.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.b.c	ENSGT00950000183001.a.b.b.k	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.b.g.a	ENSGT00950000183028.b	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b.a	ENSGT00990000203982	ENSGT00390000000145.f
Characiphysae	ANCESTRAL SPECIES	3	ENSGT00940000161739	ENSGT00390000015473	ENSGT00390000007182	ENSGT01030000234513.B.b.c	ENSGT01050000244864.B.b.a.b	ENSGT00940000157028	ENSGT00730000111087	ENSGT00950000182974.b	ENSGT00940000155360.B.l	ENSGT00940000162479.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00940000159177 #22	ENSGT00940000164275.e	ENSGT00390000005548 #24	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.b.c	ENSGT00950000183001.a.b.b.k	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.b.g.a	ENSGT00940000157728.a.b.a	ENSGT00990000203982	ENSGT00390000000145.f	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Channel catfish	MODERN SPECIES	25	cryl1 (ENSIPUG00000003986)	ENSIPUG00000004035	gjb8 (ENSIPUG00000004047)	gja3 (ENSIPUG00000004052)	zmym2 (ENSIPUG00000004063)	mphosph8 (ENSIPUG00000004105)	aff3 (ENSIPUG00000004129)	arhgef7a (ENSIPUG00000004171)	ENSIPUG00000004230	sox1a (ENSIPUG00000004246)	rev1 (ENSIPUG00000004261)	ENSIPUG00000004287	mrpl30 (ENSIPUG00000004313)	mitd1 (ENSIPUG00000004328)	kiaa1211l (ENSIPUG00000004395)	MGAT4A (ENSIPUG00000004435) #22	si:dkey-4e7.3 (ENSIPUG00000004490)	cb064 (ENSIPUG00000004541) #24	inpp4a (ENSIPUG00000004607) #25	slc9a2 (ENSIPUG00000004858)	mfsd9 (ENSIPUG00000004901)	tmem182 (ENSIPUG00000004908)	pou3f3a (ENSIPUG00000004910)	GPR45 (ENSIPUG00000004915)	c6h2orf49 (ENSIPUG00000004923)	FHL2 (ENSIPUG00000004931)	nck2a (ENSIPUG00000004971)	ENSIPUG00000004998	ecrg4a (ENSIPUG00000005010)	pdxka (ENSIPUG00000005025)	ENSIPUG00000005144
Characiphysae_b	ANCESTRAL SPECIES	11	ENSGT00940000161739	ENSGT00390000015473	ENSGT00390000007182	ENSGT01030000234513.B.b.c	ENSGT01050000244864.B.b.a.b	ENSGT00940000157028	ENSGT00730000111087	ENSGT00950000182974.b	ENSGT00940000155360.B.l	ENSGT00940000162479.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00940000159177 #22	ENSGT00940000164275.e	ENSGT00390000005548 #24	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.b.c	ENSGT00950000183001.a.b.b.k	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.b.g.a	ENSGT00940000157728.a.b.a	ENSGT00990000203982	ENSGT00390000000145.f	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Characoidei	ANCESTRAL SPECIES	1	ENSGT00940000161739	ENSGT00390000015473	ENSGT00390000007182	ENSGT01030000234513.B.b.c	ENSGT01050000244864.B.b.a.b	ENSGT00940000157028	ENSGT00730000111087	ENSGT00950000182974.b	ENSGT00940000155360.B.l	ENSGT00940000162479.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00940000159177 #22	ENSGT00940000164275.e	ENSGT00390000005548 #24	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.b.c	ENSGT00950000183001.a.b.b.k	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.b.g.a	ENSGT00940000157728.a.b.a	ENSGT00990000203982	ENSGT00390000000145.f	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Red-bellied piranha	MODERN SPECIES	102	ift88 (ENSPNAG00000010504)	cryl1 (ENSPNAG00000010215)	gjb8 (ENSPNAG00000010192)	gja3 (ENSPNAG00000010182)	ZMYM2 (ENSPNAG00000010154)	mphosph8 (ENSPNAG00000010081)	ENSPNAG00000001361	arhgef7a (ENSPNAG00000010026)	sox1a (ENSPNAG00000009917)	rev1 (ENSPNAG00000009911)	ENSPNAG00000009878	txndc9 (ENSPNAG00000001341)	mrpl30 (ENSPNAG00000009867)	mitd1 (ENSPNAG00000009862)	ENSPNAG00000009826	MGAT4A (ENSPNAG00000004946) #22	si:dkey-4e7.3 (ENSPNAG00000009736)	coa5 (ENSPNAG00000009724) #24	inpp4aa (ENSPNAG00000009658) #25	slc9a2 (ENSPNAG00000009490)	MFSD9 (ENSPNAG00000009457)	tmem182a (ENSPNAG00000009451)	pou3f3a (ENSPNAG00000009445)	GPR45 (ENSPNAG00000009440)	si:dkeyp-118h3.6 (ENSPNAG00000009437)	fhl2a (ENSPNAG00000009416)	nck2a (ENSPNAG00000009378)	ENSPNAG00000009362	ecrg4a (ENSPNAG00000009345)	uxs1 (ENSPNAG00000009324)	tmtops2b (ENSPNAG00000009308)
Mexicana tetra	MODERN SPECIES	10	gjb8 (ENSAMXG00000025993)	gja3 (ENSAMXG00000039353)	ENSAMXG00000038299	ENSAMXG00000039151	ZMYM2 (ENSAMXG00000005469)	ENSAMXG00000034330	ENSAMXG00000031759	ENSAMXG00000005439	arhgef7a (ENSAMXG00000005405)	sox1a (ENSAMXG00000025991)	rev1 (ENSAMXG00000005365)	txndc9 (ENSAMXG00000005351)	mrpl30 (ENSAMXG00000005341)	mitd1 (ENSAMXG00000005326)	ENSAMXG00000034436	MGAT4A (ENSAMXG00000005290) #22	coa5 (ENSAMXG00000005279) #24	si:dkey-4e7.3 (ENSAMXG00000036386)	inpp4aa (ENSAMXG00000005263) #25	slc9a2 (ENSAMXG00000005215)	MFSD9 (ENSAMXG00000005197)	tmem182a (ENSAMXG00000030093)	ENSAMXG00000042558	pou3f3a (ENSAMXG00000039867)	GPR45 (ENSAMXG00000025990)	si:dkeyp-118h3.6 (ENSAMXG00000041874)	fhl2a (ENSAMXG00000038356)	ENSAMXG00000012249	slc39a10 (ENSAMXG00000012176)	ENSAMXG00000035832	ENSAMXG00000041436
Electric eel	MODERN SPECIES	929												rev1 (ENSEEEG00000003761)	txndc9 (ENSEEEG00000003753)	mrpl30 (ENSEEEG00000003751)	mitd1 (ENSEEEG00000003750)	MGAT4A (ENSEEEG00000003747) #22	coa5 (ENSEEEG00000003742) #24	si:dkey-4e7.3 (ENSEEEG00000003739)	inpp4aa (ENSEEEG00000002735) #25	slc9a2 (ENSEEEG00000002658)	MFSD9 (ENSEEEG00000002653)	tmem182a (ENSEEEG00000002652)
Cyprinoidei	ANCESTRAL SPECIES	59	ENSGT00430000031142	ENSGT00940000160059.a.b.b	ENSGT00950000183165.b.a.e.b.d.a.b.p.a	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.b.a.e.b.d.a.b.p.b	ENSGT00940000167284	ENSGT00940000154095.b.b.a.b	ENSGT00940000155522.g.a	ENSGT00390000016940.c.b.a	ENSGT00950000182882.A.b.b.e	ENSGT00950000182953.A	ENSGT00940000164444.a	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.b.c	ENSGT00950000183001.a.b.b.k	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.b.g.a	ENSGT00950000183028.b	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b.a	ENSGT00990000203982	ENSGT00390000000145.f.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	122	ENSGT00950000183165.b.a.e.b.d.a.b.o	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.b.a.e.b.d.a.b.p.b	ENSGT00940000167284.p.b.a	ENSGT00940000154095.b.b.a.b.a	ENSGT00940000155522.g.a.b	ENSGT00390000016940.c.b.a.a	ENSGT00950000182882.A.b.b.e.b	ENSGT00950000182953.A	ENSGT00940000164444.a.j	ENSGT00390000010868.g	ENSGT00940000163031.b.a.b.b	ENSGT00390000005914.b.b	ENSGT00940000175825	ENSGT00390000005914.b.a.a	ENSGT00940000159177.g #22	ENSGT00940000157360.d.b #25	ENSGT00940000156807.e	ENSGT00940000159390.e	ENSGT00390000017581.b.a.a	ENSGT00940000164385.a.a.a.b.c.b	ENSGT00950000183001.a.b.b.k.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.b.g.a.a.a	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b.a.d	ENSGT00990000203982	ENSGT00390000000145.f.b	ENSGT00940000157868.h	ENSGT01100000263502.A.a.a.a.b.a.a.a	ENSGT00940000158714.d.b.a
Goldfish	MODERN SPECIES	49	ENSCARG00000064592	fn1a (ENSCARG00000064711)	ENSCARG00000066428	mnx2a (ENSCARG00000066460)	tuba8l3 (ENSCARG00000066483)	dnajb2 (ENSCARG00000066492)	ptprna (ENSCARG00000066530)	desma (ENSCARG00000066972)	TMEM198 (ENSCARG00000067059)	BIN1 (ENSCARG00000067097)	ENSCARG00000067283	ihha (ENSCARG00000067304)	mitd1 (ENSCARG00000067315)	ENSCARG00000067349	creg2 (ENSCARG00000067360)	ENSCARG00000067380 #22	inpp4aa (ENSCARG00000067460) #25	slc9a2 (ENSCARG00000067604)	MFSD9 (ENSCARG00000067689)	tmem182a (ENSCARG00000067700)	pou3f3a (ENSCARG00000067725)	GPR45 (ENSCARG00000067732)	si:dkeyp-118h3.6 (ENSCARG00000067735)	fhl2a (ENSCARG00000067750)	nck2a (ENSCARG00000067753)	ENSCARG00000067756	ecrg4a (ENSCARG00000067758)	uxs1 (ENSCARG00000067763)	tmtops2b (ENSCARG00000067823)	st6gal2a (ENSCARG00000067833)	ENSCARG00000067852
Cyprininae_a	ANCESTRAL SPECIES	95	ENSGT00950000183165.b.a.e.b.d.a.b.o	ENSGT00950000183165.b.a.e.b.d.a.a.a.b	ENSGT00950000183165.b.a.e.b.d.a.b.p.b	ENSGT00940000167284.p.b.a	ENSGT00940000154095.b.b.a.b.a	ENSGT00940000155522.g.a.b	ENSGT00390000016940.c.b.a.a	ENSGT00950000182882.A.b.b.e.b	ENSGT00950000182953.A	ENSGT00940000164444.a.j	ENSGT00390000010868.g	ENSGT00940000163031.b.a.b.b	ENSGT00390000005914.b.b	ENSGT00940000175825	ENSGT00390000005914.b.a.a	ENSGT00940000159177.g #22	ENSGT00940000157360.d.b #25	ENSGT00940000156807.e	ENSGT00940000159390.e	ENSGT00390000017581.b.a.a	ENSGT00940000164385.a.a.a.b.c.b	ENSGT00950000183001.a.b.b.k.b	ENSGT00390000007488.i	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b.a.d	ENSGT00990000203982.b	ENSGT01100000263502.A.a.a.a.b.a.a.a	ENSGT00940000158714.d.b.a	ENSGT00390000000684.q	ENSGT00950000182849.A.f.b.p	ENSGT01100000263563.c.a.a.a
Common carp reference	MODERN SPECIES	46	ENSCCRG00000064495	ENSCCRG00000068659	mnx2a (ENSCCRG00000073003)	tuba8l5 (ENSCCRG00000060295)	tuba8l3 (ENSCCRG00000010063)	dnajb2 (ENSCCRG00000071393)	desma (ENSCCRG00000011771)	ptprna (ENSCCRG00000071126)	ENSCCRG00000080691	ENSCCRG00000021338	ENSCCRG00000021320	ihha (ENSCCRG00000054515)	mitd1 (ENSCCRG00000004687)	ENSCCRG00000004632	creg2 (ENSCCRG00000080107)	ENSCCRG00000074987 #22	inpp4aa (ENSCCRG00000034683) #25	slc9a2 (ENSCCRG00000034592)	MFSD9 (ENSCCRG00000047853)	tmem182a (ENSCCRG00000074451)	pou3f3a (ENSCCRG00000003131)	GPR45 (ENSCCRG00000013995)	si:dkeyp-118h3.6 (ENSCCRG00000006862)	fhl2a (ENSCCRG00000021945)	nck2a (ENSCCRG00000013985)	ENSCCRG00000013981	ecrg4a (ENSCCRG00000006711)	ENSCCRG00000076164	tmtops2b (ENSCCRG00000053332)	st6gal2a (ENSCCRG00000012563)	ENSCCRG00000040982
Golden-line barbel	MODERN SPECIES	336		fn1a (ENSSGRG00000049450)	ENSSGRG00000050323	mnx2a (ENSSGRG00000050324)	ENSSGRG00000050327	dnajb2 (ENSSGRG00000050328)	ptprna (ENSSGRG00000050337)	desma (ENSSGRG00000050413)	TMEM198 (ENSSGRG00000050463)	ENSSGRG00000050467	ihha (ENSSGRG00000050474)	mitd1 (ENSSGRG00000050475)	ENSSGRG00000050476	ENSSGRG00000050479	creg2 (ENSSGRG00000050480)	MGAT4A (ENSSGRG00000050481) #22	si:dkey-4e7.3 (ENSSGRG00000050482)	inpp4aa (ENSSGRG00000050501) #25	slc9a2 (ENSSGRG00000051188)	MFSD9 (ENSSGRG00000051189)	tmem182a (ENSSGRG00000051190)	pou3f3a (ENSSGRG00000051191)	GPR45 (ENSSGRG00000051192)	si:dkeyp-118h3.6 (ENSSGRG00000051193)	FHL2 (ENSSGRG00000051194)	nck2a (ENSSGRG00000051195)	ecrg4a (ENSSGRG00000051200)	uxs1 (ENSSGRG00000051201)	ENSSGRG00000051203	ENSSGRG00000051204	tmtops2b (ENSSGRG00000051205)
Cyprininae	ANCESTRAL SPECIES	329												ENSGT00940000164444.a.i	ENSGT00390000010868.h	ENSGT00940000163031.b.a.b.a	ENSGT00390000005914.b.a.b	ENSGT00940000159177.h #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d.a #25	ENSGT00940000159390.f	ENSGT00390000017581.b.a.b	ENSGT00940000164385.a.a.a.b.c.a	ENSGT00950000183001.a.b.b.k.a	ENSGT00950000183028.a.a.a.g.b.g.a.b	ENSGT00950000183028.b	ENSGT00950000183028.a.a.a.g.b.g.a.a.b	ENSGT00940000157728.a.b.a.c	ENSGT00390000000145.f.a	ENSGT00940000157868.g	ENSGT01100000263502.A.a.a.a.b.a.a.b	ENSGT00940000158714.d.b.b
Cyprininae_a	ANCESTRAL SPECIES	126		ENSGT00950000183214.a.b.a.b.f.a.a.a.b	ENSGT00940000155126.s.b.a.a	ENSGT00940000166348.a	ENSGT00940000160059.a.b.b.c	ENSGT00950000183165.b.b	ENSGT00940000167284.p.b.b	ENSGT00940000154095.b.b.a.b.b	ENSGT00940000155522.g.a.a	ENSGT00390000016940.c.b.a.b	ENSGT00950000182882.A.b.b.e.a	ENSGT00940000164444.a.i	ENSGT00390000010868.h	ENSGT00940000163031.b.a.b.a	ENSGT00390000005914.b.a.b	ENSGT00940000159177.h #22	ENSGT00940000164275.e	ENSGT00940000157360.d.a #25	ENSGT00940000159390.f	ENSGT00390000017581.b.a.b	ENSGT00940000164385.a.a.a.b.c.a	ENSGT00950000183001.a.b.b.k.a	ENSGT00390000007488.j	ENSGT00950000183028.a.a.a.g.b.g.a.b	ENSGT00950000183028.b	ENSGT00950000183028.a.a.a.g.b.g.a.a.b	ENSGT00940000157728.a.b.a.c	ENSGT00990000203982.a	ENSGT00390000000145.f.b	ENSGT00940000157868.h	ENSGT00940000157868.g
Common carp reference	MODERN SPECIES	41	ENSCCRG00000037457	ENSCCRG00000066621	ENSCCRG00000011725	ENSCCRG00000000774	ENSCCRG00000072723	ENSCCRG00000000795	tuba8l3 (ENSCCRG00000034603)	ENSCCRG00000076394	dnajb2 (ENSCCRG00000064837)	ptprna (ENSCCRG00000034582)	desma (ENSCCRG00000034567)	ENSCCRG00000053719	ENSCCRG00000011773	ihha (ENSCCRG00000021319)	ENSCCRG00000038329	ENSCCRG00000044039 #22	si:dkey-4e7.3 (ENSCCRG00000044028)	inpp4aa (ENSCCRG00000052641) #25	MFSD9 (ENSCCRG00000081946)	tmem182a (ENSCCRG00000047850)	pou3f3a (ENSCCRG00000006869)	GPR45 (ENSCCRG00000074077)	fhl2a (ENSCCRG00000006856)	nck2a (ENSCCRG00000082278)	ENSCCRG00000070296	ecrg4a (ENSCCRG00000013976)	uxs1 (ENSCCRG00000006709)	tmtops2b (ENSCCRG00000058622)	st6gal2a (ENSCCRG00000068601)	ENSCCRG00000000234	pdzk1 (ENSCCRG00000041019)
Golden-line barbel	MODERN SPECIES	412	fn1a (ENSSGRG00000006685)	ENSSGRG00000006630	ENSSGRG00000006628	mnx2a (ENSSGRG00000006627)	tuba8l5 (ENSSGRG00000006625)	ENSSGRG00000006623	dnajb2 (ENSSGRG00000006622)	ptprna (ENSSGRG00000005255)	desma (ENSSGRG00000005065)	TMEM198 (ENSSGRG00000005061)	BIN1 (ENSSGRG00000005056)	ihha (ENSSGRG00000005047)	mitd1 (ENSSGRG00000005044)	ENSSGRG00000005042	creg2 (ENSSGRG00000005040)	MGAT4A (ENSSGRG00000003463) #22	ENSSGRG00000003417	inpp4aa (ENSSGRG00000003384) #25	slc9a2 (ENSSGRG00000003377)	MFSD9 (ENSSGRG00000003374)	tmem182a (ENSSGRG00000003371)	GPR45 (ENSSGRG00000003368)	si:dkeyp-118h3.6 (ENSSGRG00000003366)	fhl2a (ENSSGRG00000003336)	ENSSGRG00000003331	nck2a (ENSSGRG00000003233)	ENSSGRG00000003227	ECRG4 (ENSSGRG00000003223)	uxs1 (ENSSGRG00000003085)	tmtops2b (ENSSGRG00000003067)	st6gal2a (ENSSGRG00000003060)
Goldfish	MODERN SPECIES	27	map3k12 (ENSCARG00000060481)	ENSCARG00000060430	SLC5A7 (ENSCARG00000060301)	ENSCARG00000060068	ENSCARG00000060039	il10rb (ENSCARG00000059996)	ENSCARG00000048942	ENSCARG00000048362	ENSCARG00000048344	ENSCARG00000048332	ENSCARG00000048318	ihha (ENSCARG00000048285)	mitd1 (ENSCARG00000048258)	ENSCARG00000048229	creg2 (ENSCARG00000048190)	MGAT4A (ENSCARG00000047479) #22	coa5 (ENSCARG00000047421) #24	si:dkey-4e7.3 (ENSCARG00000047390)	inpp4aa (ENSCARG00000045636) #25	ENSCARG00000045515	MFSD9 (ENSCARG00000045502)	tmem182a (ENSCARG00000045483)	pou3f3a (ENSCARG00000045450)	GPR45 (ENSCARG00000045435)	si:dkeyp-118h3.6 (ENSCARG00000017359)	fhl2a (ENSCARG00000017338)	nck2a (ENSCARG00000017319)	uxs1 (ENSCARG00000017237)	tmtops2b (ENSCARG00000017220)	st6gal2a (ENSCARG00000017211)	ENSCARG00000016995
Zebrafish	MODERN SPECIES	24	MYO16 (ENSDARG00000078582)	ENSDARG00000006863	mnx2a (ENSDARG00000042106)	tuba8l5 (ENSDARG00000094466)	tuba8l3 (ENSDARG00000070155)	dnajb2 (ENSDARG00000058644)	ptprna (ENSDARG00000058646)	desma (ENSDARG00000058656)	TMEM198 (ENSDARG00000042115)	BIN1 (ENSDARG00000042114)	ENSDARG00000088891	ihha (ENSDARG00000058733)	mitd1 (ENSDARG00000044766)	ENSDARG00000097160	creg2 (ENSDARG00000000666)	MGAT4A (ENSDARG00000063330) #22	coa5 (ENSDARG00000094833) #24	si:dkey-4e7.3 (ENSDARG00000042124)	ENSDARG00000110863	inpp4aa (ENSDARG00000063352) #25	slc9a2 (ENSDARG00000058780)	MFSD9 (ENSDARG00000074728)	tmem182a (ENSDARG00000040374)	ENSDARG00000110808	pou3f3a (ENSDARG00000042032)	GPR45 (ENSDARG00000063357)	C9H2orf49 (ENSDARG00000042025)	fhl2a (ENSDARG00000042018)	nck2a (ENSDARG00000018206)	ecrg4a (ENSDARG00000056087)	uxs1 (ENSDARG00000056102)
Euteleosteomorpha	ANCESTRAL SPECIES	98	ENSGT00530000063715.b	ENSGT00940000166383	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Acanthomorphata	ANCESTRAL SPECIES	5	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	15	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Percomorphaceae	ANCESTRAL SPECIES	23	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Atherinomorphae	ANCESTRAL SPECIES	13	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000175825	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000158714.d.b
Cyprinodontiformes	ANCESTRAL SPECIES	15	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000175825	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000158714.d.b
Aplocheiloidei	ANCESTRAL SPECIES	6	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000175825	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000158714.d.b
Mangrove rivulus	MODERN SPECIES	15	trim13 (ENSKMAG00000002177)	spryd7b (ENSKMAG00000002142)	kpna3 (ENSKMAG00000002059)	rcbtb1 (ENSKMAG00000001988)	ENSKMAG00000001966	MCF2L (ENSKMAG00000001883)	ATP11A (ENSKMAG00000001684)	sox1a (ENSKMAG00000001638)	arhgef7a (ENSKMAG00000001600)	ENSKMAG00000001570	rev1 (ENSKMAG00000001546)	txndc9 (ENSKMAG00000001512)	mrpl30 (ENSKMAG00000001499)	mitd1 (ENSKMAG00000001466)	ENSKMAG00000001442	MGAT4A (ENSKMAG00000001367) #22	coa5 (ENSKMAG00000001340) #24	si:dkey-4e7.3 (ENSKMAG00000001334)	si:dkey-4e7.3 (ENSKMAG00000001300)	inpp4aa (ENSKMAG00000001151) #25	slc9a2 (ENSKMAG00000001008)	MFSD9 (ENSKMAG00000000989)	tmem182a (ENSKMAG00000000977)	ENSKMAG00000000944	GPR45 (ENSKMAG00000000936)	si:dkeyp-118h3.6 (ENSKMAG00000000929)	FHL2 (ENSKMAG00000000896)	nck2a (ENSKMAG00000000872)	ecrg4a (ENSKMAG00000000853)	uxs1 (ENSKMAG00000000837)	tmtops2b (ENSKMAG00000000796)
Turquoise killifish	MODERN SPECIES	1623	rnaseh2b (ENSNFUG00015017501)	trim13 (ENSNFUG00015017521)	SPRYD7 (ENSNFUG00015017523)	KPNA3 (ENSNFUG00015017557)	RCBTB1 (ENSNFUG00015017684)	MCF2L (ENSNFUG00015017797)	ATP11A (ENSNFUG00015018863)	ARHGEF7A (ENSNFUG00015020054)	ENSNFUG00015020288	REV1 (ENSNFUG00015020299)	TXNDC9 (ENSNFUG00015020433)	C9H2ORF15 (ENSNFUG00015020437)	MITD1 (ENSNFUG00015020441)	SI (ENSNFUG00015020451)	creg2 (ENSNFUG00015020456)	MGAT4A (ENSNFUG00015020492) #22	ENSNFUG00015020895	coa5 (ENSNFUG00015020896) #24	si:dkey-4e7.3 (ENSNFUG00015020897)	INPP4AA (ENSNFUG00015020914) #25	ENSNFUG00015021108	slc9a2 (ENSNFUG00015021122)	MFSD9 (ENSNFUG00015021186)	TMEM182 (ENSNFUG00015021188)	ENSNFUG00015021194	GPR45 (ENSNFUG00015021196)	si:dkeyp-118h3.6 (ENSNFUG00015021199)	FHL2 (ENSNFUG00015021201)	NCK2 (ENSNFUG00015021206)	C2ORF40 (ENSNFUG00015021207)	UXS1 (ENSNFUG00015021211)
Cyprinodontoidei	ANCESTRAL SPECIES	13	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000175825	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e.g	ENSGT00940000164275.e.h	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
NAME_4	ANCESTRAL SPECIES	25	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e.g	ENSGT00940000164275.e.h	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Mummichog	MODERN SPECIES	2211	trim13 (ENSFHEG00000012169)	spryd7b (ENSFHEG00000012202)	kpna3 (ENSFHEG00000012312)	rcbtb1 (ENSFHEG00000012359)	ENSFHEG00000012396	MCF2L (ENSFHEG00000012452)	ATP11A (ENSFHEG00000012541)	sox1a (ENSFHEG00000012555)	arhgef7a (ENSFHEG00000012610)	rev1 (ENSFHEG00000012619)	txndc9 (ENSFHEG00000012660)	mrpl30 (ENSFHEG00000012666)	mitd1 (ENSFHEG00000012693)	ENSFHEG00000012701	creg2 (ENSFHEG00000012710)	MGAT4A (ENSFHEG00000012756) #22	coa5 (ENSFHEG00000012776) #24	si:dkey-4e7.3 (ENSFHEG00000012791)	si:dkey-4e7.3 (ENSFHEG00000012817)	inpp4aa (ENSFHEG00000012887) #25	slc9a2 (ENSFHEG00000013004)	MFSD9 (ENSFHEG00000013016)	tmem182a (ENSFHEG00000013024)	ENSFHEG00000013032	GPR45 (ENSFHEG00000013044)	si:dkeyp-118h3.6 (ENSFHEG00000013093)	FHL2 (ENSFHEG00000000297)	nck2a (ENSFHEG00000013112)	ecrg4a (ENSFHEG00000013118)	uxs1 (ENSFHEG00000013125)	tmtops2b (ENSFHEG00000000300)
Sheepshead minnow	MODERN SPECIES	1024					DCUN1D2 (ENSCVAG00000018470)	grtp1b (ENSCVAG00000018440)	lamp1b (ENSCVAG00000018388)	ENSCVAG00000018380	pou2f1b (ENSCVAG00000018375)	rev1 (ENSCVAG00000018356)	txndc9 (ENSCVAG00000018343)	mrpl30 (ENSCVAG00000018330)	mitd1 (ENSCVAG00000018324)	ENSCVAG00000018298	creg2 (ENSCVAG00000018271)	MGAT4A (ENSCVAG00000018256) #22	coa5 (ENSCVAG00000018174) #24	si:dkey-4e7.3 (ENSCVAG00000018172)	si:dkey-4e7.3 (ENSCVAG00000018142)	inpp4aa (ENSCVAG00000018119) #25	slc9a2 (ENSCVAG00000017981)
Poeciliinae	ANCESTRAL SPECIES		ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000175825	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e.g	ENSGT00940000164275.e.h	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Poecilia	ANCESTRAL SPECIES	13	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000175825	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e.g	ENSGT00940000164275.e.h	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
NAME_6	ANCESTRAL SPECIES	49	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000175825	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e.g	ENSGT00940000164275.e.h	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Sailfin molly	MODERN SPECIES	306							tnnt1 (ENSPLAG00000021181)	arhgef7a (ENSPLAG00000021222)	ENSPLAG00000021233	rev1 (ENSPLAG00000021237)	txndc9 (ENSPLAG00000021355)	mrpl30 (ENSPLAG00000021371)	mitd1 (ENSPLAG00000021388)	ENSPLAG00000021397	creg2 (ENSPLAG00000021403)	MGAT4A (ENSPLAG00000021438) #22	coa5 (ENSPLAG00000021454) #24	si:dkey-4e7.3 (ENSPLAG00000021463)	si:dkey-4e7.3 (ENSPLAG00000021469)	inpp4aa (ENSPLAG00000021514) #25	slc9a2 (ENSPLAG00000021608)	MFSD9 (ENSPLAG00000021614)	tmem182a (ENSPLAG00000021625)	ENSPLAG00000021628	GPR45 (ENSPLAG00000021636)	si:dkeyp-118h3.6 (ENSPLAG00000021639)	FHL2 (ENSPLAG00000021646)	nck2a (ENSPLAG00000021651)	ecrg4a (ENSPLAG00000021652)	ENSPLAG00000021670	ENSPLAG00000021837
Amazon molly	MODERN SPECIES	321	trim13 (ENSPFOG00000016718)	spryd7b (ENSPFOG00000016704)	kpna3 (ENSPFOG00000016652)	rcbtb1 (ENSPFOG00000016604)	MCF2L (ENSPFOG00000016374)	ATP11A (ENSPFOG00000016018)	sox1a (ENSPFOG00000015998)	arhgef7a (ENSPFOG00000015847)	ENSPFOG00000015830	rev1 (ENSPFOG00000015784)	txndc9 (ENSPFOG00000015776)	mrpl30 (ENSPFOG00000015775)	mitd1 (ENSPFOG00000015751)	ENSPFOG00000022661	creg2 (ENSPFOG00000015732)	MGAT4A (ENSPFOG00000015688) #22	coa5 (ENSPFOG00000015676) #24	si:dkey-4e7.3 (ENSPFOG00000023585)	si:dkey-4e7.3 (ENSPFOG00000015644)	inpp4aa (ENSPFOG00000015519) #25	slc9a2 (ENSPFOG00000015377)	MFSD9 (ENSPFOG00000015343)	tmem182a (ENSPFOG00000015341)	ENSPFOG00000015330	GPR45 (ENSPFOG00000020103)	si:dkeyp-118h3.6 (ENSPFOG00000015324)	FHL2 (ENSPFOG00000015302)	nck2a (ENSPFOG00000015297)	ecrg4a (ENSPFOG00000015288)	uxs1 (ENSPFOG00000015215)	tmtops2b (ENSPFOG00000015179)
Guppy	MODERN SPECIES	450	kpna3 (ENSPREG00000007816)	rcbtb1 (ENSPREG00000007873)	ENSPREG00000007916	MCF2L (ENSPREG00000007974)	ATP11A (ENSPREG00000008168)	sox1a (ENSPREG00000008412)	arhgef7a (ENSPREG00000008422)	ENSPREG00000008458	rev1 (ENSPREG00000008480)	txndc9 (ENSPREG00000008514)	mrpl30 (ENSPREG00000008569)	ENSPREG00000008578	mitd1 (ENSPREG00000008587)	ENSPREG00000008603	creg2 (ENSPREG00000008617)	MGAT4A (ENSPREG00000008674) #22	coa5 (ENSPREG00000008736) #24	si:dkey-4e7.3 (ENSPREG00000008789)	inpp4aa (ENSPREG00000008865) #25	slc9a2 (ENSPREG00000009022)	MFSD9 (ENSPREG00000009213)	tmem182a (ENSPREG00000009229)	ENSPREG00000009250	GPR45 (ENSPREG00000009256)	FHL2 (ENSPREG00000009261)	nck2a (ENSPREG00000009287)	ecrg4a (ENSPREG00000009295)	uxs1 (ENSPREG00000009314)	tmtops2b (ENSPREG00000009345)	st6gal2a (ENSPREG00000009371)	jam2b (ENSPREG00000009428)
Platyfish	MODERN SPECIES	21	spryd7b (ENSXMAG00000011274)	kpna3 (ENSXMAG00000011285)	rcbtb1 (ENSXMAG00000011306)	ENSXMAG00000011329	MCF2L (ENSXMAG00000011333)	ATP11A (ENSXMAG00000011392)	sox1a (ENSXMAG00000019932)	arhgef7a (ENSXMAG00000011449)	ENSXMAG00000030063	rev1 (ENSXMAG00000011456)	txndc9 (ENSXMAG00000011465)	mrpl30 (ENSXMAG00000024725)	mitd1 (ENSXMAG00000011466)	ENSXMAG00000030028	creg2 (ENSXMAG00000011470)	MGAT4A (ENSXMAG00000011475) #22	coa5 (ENSXMAG00000011505) #24	si:dkey-4e7.3 (ENSXMAG00000028630)	ENSXMAG00000024913	si:dkey-4e7.3 (ENSXMAG00000023487)	inpp4aa (ENSXMAG00000011512) #25	slc9a2 (ENSXMAG00000011549)	MFSD9 (ENSXMAG00000026862)	tmem182a (ENSXMAG00000011583)	ENSXMAG00000023897	GPR45 (ENSXMAG00000019935)	si:dkeyp-118h3.6 (ENSXMAG00000011593)	FHL2 (ENSXMAG00000011596)	nck2a (ENSXMAG00000022396)	ecrg4a (ENSXMAG00000011609)	uxs1 (ENSXMAG00000011616)
Oryzias	ANCESTRAL SPECIES	10	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00940000175825	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000158714.d.b
Oryzias_b	ANCESTRAL SPECIES	10	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000158714.d.b
Indian medaka	MODERN SPECIES	18	spryd7b (ENSOMEG00000012377)	kpna3 (ENSOMEG00000012359)	rcbtb1 (ENSOMEG00000012324)	ENSOMEG00000012299	MCF2L (ENSOMEG00000012266)	ATP11A (ENSOMEG00000012161)	sox1a (ENSOMEG00000011835)	arhgef7a (ENSOMEG00000000851)	ENSOMEG00000011755	rev1 (ENSOMEG00000000279)	txndc9 (ENSOMEG00000011601)	mrpl30 (ENSOMEG00000011587)	mitd1 (ENSOMEG00000011581)	ENSOMEG00000011558	creg2 (ENSOMEG00000011510)	MGAT4A (ENSOMEG00000011501) #22	coa5 (ENSOMEG00000011462) #24	si:dkey-4e7.3 (ENSOMEG00000011435)	si:dkey-4e7.3 (ENSOMEG00000011362)	inpp4aa (ENSOMEG00000011288) #25	slc9a2 (ENSOMEG00000011015)	MFSD9 (ENSOMEG00000010992)	ENSOMEG00000010967	tmem182a (ENSOMEG00000010949)	ENSOMEG00000010934	GPR45 (ENSOMEG00000010925)	si:dkeyp-118h3.6 (ENSOMEG00000010912)	FHL2 (ENSOMEG00000010894)	nck2a (ENSOMEG00000010876)	ecrg4a (ENSOMEG00000010822)	uxs1 (ENSOMEG00000010779)
Javanese ricefish	MODERN SPECIES	13	rcbtb1 (ENSOJAG00000011940)	ENSOJAG00000011929	MCF2L (ENSOJAG00000011841)	ATP11A (ENSOJAG00000010760)	sox1a (ENSOJAG00000010596)	ENSOJAG00000010589	arhgef7a (ENSOJAG00000010391)	ENSOJAG00000010364	rev1 (ENSOJAG00000010353)	txndc9 (ENSOJAG00000010327)	mrpl30 (ENSOJAG00000010291)	mitd1 (ENSOJAG00000010262)	ENSOJAG00000010242	ENSOJAG00000010210	creg2 (ENSOJAG00000010203)	MGAT4A (ENSOJAG00000009320) #22	coa5 (ENSOJAG00000009219) #24	si:dkey-4e7.3 (ENSOJAG00000009163)	inpp4aa (ENSOJAG00000008549) #25	slc9a2 (ENSOJAG00000008279)	MFSD9 (ENSOJAG00000008220)	tmem182a (ENSOJAG00000008205)	ENSOJAG00000008192	GPR45 (ENSOJAG00000008179)	si:dkeyp-118h3.6 (ENSOJAG00000008168)	FHL2 (ENSOJAG00000008063)	nck2a (ENSOJAG00000008032)	ecrg4a (ENSOJAG00000008000)	uxs1 (ENSOJAG00000007195)	tmtops2b (ENSOJAG00000007091)	st6gal2a (ENSOJAG00000007062)
Oryzias_a	ANCESTRAL SPECIES	36	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00940000156974.f	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000175825	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e.i	ENSGT00940000164275.e.j	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Chinese medaka	MODERN SPECIES	757	trim13 (ENSOSIG00000015224)	spryd7b (ENSOSIG00000015225)	kpna3 (ENSOSIG00000015239)	ENSOSIG00000016070	MCF2L (ENSOSIG00000016088)	ATP11A (ENSOSIG00000016270)	sox1a (ENSOSIG00000016873)	arhgef7a (ENSOSIG00000016913)	ENSOSIG00000017283	rev1 (ENSOSIG00000017287)	txndc9 (ENSOSIG00000017290)	mrpl30 (ENSOSIG00000017291)	mitd1 (ENSOSIG00000017295)	ENSOSIG00000017298	creg2 (ENSOSIG00000017299)	MGAT4A (ENSOSIG00000017301) #22	coa5 (ENSOSIG00000017303) #24	si:dkey-4e7.3 (ENSOSIG00000017304)	inpp4aa (ENSOSIG00000017310) #25	slc9a2 (ENSOSIG00000017367)	MFSD9 (ENSOSIG00000017649)	tmem182a (ENSOSIG00000017654)	ENSOSIG00000017659	GPR45 (ENSOSIG00000017660)	si:dkeyp-118h3.6 (ENSOSIG00000017662)	FHL2 (ENSOSIG00000017665)	nck2a (ENSOSIG00000017670)	ecrg4a (ENSOSIG00000017681)	uxs1 (ENSOSIG00000017735)	ENSOSIG00000018522	st6gal2a (ENSOSIG00000018526)
Japanese Medaka HdrR	MODERN SPECIES	13	trim13 (ENSORLG00000011855)	kpna3 (ENSORLG00000011901)	RCBTB1 (ENSORLG00000011958)	ENSORLG00000012020	ENSORLG00000024857	ATP11A (ENSORLG00000012096)	sox1a (ENSORLG00000012110)	arhgef7a (ENSORLG00000012157)	ENSORLG00000022089	rev1 (ENSORLG00000012211)	txndc9 (ENSORLG00000012228)	mrpl30 (ENSORLG00000025091)	mitd1 (ENSORLG00000012263)	ENSORLG00000012269	creg2 (ENSORLG00000012285)	MGAT4A (ENSORLG00000012322) #22	coa5 (ENSORLG00000027137) #24	si:dkey-4e7.3 (ENSORLG00000027912)	si:dkey-4e7.3 (ENSORLG00000024742)	inpp4aa (ENSORLG00000012384) #25	slc9a2 (ENSORLG00000012399)	MFSD9 (ENSORLG00000026729)	tmem182a (ENSORLG00000012431)	ENSORLG00000012448	si:dkeyp-118h3.6 (ENSORLG00000012460)	GPR45 (ENSORLG00000022352)	FHL2 (ENSORLG00000012482)	nck2a (ENSORLG00000012499)	ecrg4a (ENSORLG00000026630)	uxs1 (ENSORLG00000012524)	ENSORLG00000027753
Ovalentaria_B	ANCESTRAL SPECIES	12	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Pomacentridae	ANCESTRAL SPECIES	29	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d.c #25	ENSGT00940000157360.d.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868
Pomacentridae_A	ANCESTRAL SPECIES	29	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d.c #25	ENSGT00940000157360.d.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868
Amphiprion	ANCESTRAL SPECIES	24	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00970000193381.a.a.a.a.b.b.a.b.e	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000157053.u.b
Clown anemonefish	DUPLICATION
Clown anemonefish	MODERN SPECIES	3662														ENSAOCG00000015460	creg2 (ENSAOCG00000015444)	ENSAOCG00000015418 #22	COA5 (ENSAOCG00000015363) #24
Clown anemonefish	MODERN SPECIES	398																MGAT4A (ENSAOCG00000016360) #22	coa5 (ENSAOCG00000016316) #24	si:dkey-4e7.3 (ENSAOCG00000016279)
Orange clownfish	MODERN SPECIES	3	spryd7b (ENSAPEG00000006077)	kpna3 (ENSAPEG00000006105)	rcbtb1 (ENSAPEG00000006180)	ENSAPEG00000006217	MCF2L (ENSAPEG00000006231)	ATP11A (ENSAPEG00000006346)	sox1a (ENSAPEG00000006437)	arhgef7a (ENSAPEG00000006536)	ENSAPEG00000006641	rev1 (ENSAPEG00000006654)	txndc9 (ENSAPEG00000006667)	mrpl30 (ENSAPEG00000006678)	mitd1 (ENSAPEG00000006692)	ENSAPEG00000006709	creg2 (ENSAPEG00000006720)	MGAT4A (ENSAPEG00000006737) #22	coa5 (ENSAPEG00000006792) #24	si:dkey-4e7.3 (ENSAPEG00000006798)	inpp4aa (ENSAPEG00000006814) #25	slc9a2 (ENSAPEG00000006878)	MFSD9 (ENSAPEG00000006895)	tmem182a (ENSAPEG00000006910)	ENSAPEG00000007011	GPR45 (ENSAPEG00000007041)	si:dkeyp-118h3.6 (ENSAPEG00000007056)	ENSAPEG00000007078	FHL2 (ENSAPEG00000007116)	nck2a (ENSAPEG00000007168)	uxs1 (ENSAPEG00000007185)	ENSAPEG00000007207	ENSAPEG00000007212
Spiny chromis	MODERN SPECIES	749							sox1a (ENSAPOG00000006082)	arhgef7a (ENSAPOG00000000712)	ENSAPOG00000006031	rev1 (ENSAPOG00000005994)	txndc9 (ENSAPOG00000005911)	mrpl30 (ENSAPOG00000005884)	mitd1 (ENSAPOG00000005868)	ENSAPOG00000000149	creg2 (ENSAPOG00000005841)	MGAT4A (ENSAPOG00000005808) #22	coa5 (ENSAPOG00000005742) #24	si:dkey-4e7.3 (ENSAPOG00000005728)	ENSAPOG00000005703 #25
Bicolor damselfish	MODERN SPECIES	1353									ENSSPAG00000020071	rev1 (ENSSPAG00000020110)	txndc9 (ENSSPAG00000020132)	mrpl30 (ENSSPAG00000020142)	mitd1 (ENSSPAG00000020163)	ENSSPAG00000020183	creg2 (ENSSPAG00000020196)	MGAT4A (ENSSPAG00000020210) #22	si:dkey-4e7.3 (ENSSPAG00000020246)	coa5 (ENSSPAG00000020259) #24	inpp4aa (ENSSPAG00000020272) #25	slc9a2 (ENSSPAG00000020325)	MFSD9 (ENSSPAG00000020371)	tmem182a (ENSSPAG00000020381)	ENSSPAG00000020407	GPR45 (ENSSPAG00000020421)
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h	ENSGT00950000183134.c.a.a	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000162660.a	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h	ENSGT00950000183134.c.a.a	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000162660.a	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h	ENSGT00950000183134.c.a.a	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000162660.a	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868
Lyretail cichlid	MODERN SPECIES	303	DYNLT3 (ENSNBRG00000005684)	ENSNBRG00000005653	ENSNBRG00000005648	srpx (ENSNBRG00000005555)	ENSNBRG00000005512	OTC (ENSNBRG00000005490)	OTC (ENSNBRG00000005455)	gpr161b (ENSNBRG00000005426)	dcaf6 (ENSNBRG00000005395)	mpc2b (ENSNBRG00000005383)	rpl24 (ENSNBRG00000005337)	ENSNBRG00000005330	nxpe3 (ENSNBRG00000005299)	me3 (ENSNBRG00000005263)	creg2 (ENSNBRG00000005245)	MGAT4A (ENSNBRG00000005200) #22	coa5 (ENSNBRG00000005182) #24	si:dkey-4e7.3 (ENSNBRG00000005146)	inpp4aa (ENSNBRG00000005070) #25	si:ch211-229n2.6 (ENSNBRG00000005054)	slc9a2 (ENSNBRG00000004835)	MFSD9 (ENSNBRG00000004762)	tmem182a (ENSNBRG00000004727)	ENSNBRG00000004715	GPR45 (ENSNBRG00000004683)	si:dkeyp-118h3.6 (ENSNBRG00000004648)	FHL2 (ENSNBRG00000004639)	nck2a (ENSNBRG00000004625)	ENSNBRG00000004617	ecrg4a (ENSNBRG00000004602)	uxs1 (ENSNBRG00000004485)
Haplochromini	ANCESTRAL SPECIES	29	ENSGT00530000063186.a	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417.t	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h	ENSGT00950000183134.c.a.a	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000162660.a	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868
Burton s mouthbrooder	MODERN SPECIES	708											mpc2b (ENSHBUG00000001613)	rpl24 (ENSHBUG00000000011)	cep97 (ENSHBUG00000001598)	me3 (ENSHBUG00000001586)	creg2 (ENSHBUG00000001575)	MGAT4A (ENSHBUG00000001564) #22	coa5 (ENSHBUG00000000880) #24	si:dkey-4e7.3 (ENSHBUG00000000008)	inpp4aa (ENSHBUG00000001533) #25	si:ch211-229n2.6 (ENSHBUG00000001520)	slc9a2 (ENSHBUG00000023758)	MFSD9 (ENSHBUG00000023611)	tmem182a (ENSHBUG00000023599)	ENSHBUG00000023590	ENSHBUG00000023572	GPR45 (ENSHBUG00000023565)	si:dkeyp-118h3.6 (ENSHBUG00000023557)	FHL2 (ENSHBUG00000023549)	nck2a (ENSHBUG00000023514)	ENSHBUG00000023493	ecrg4a (ENSHBUG00000023471)
Haplochromini_A	ANCESTRAL SPECIES	31	ENSGT00390000003231.b	ENSGT00940000155009.a	ENSGT00940000180067	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417.t	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h	ENSGT00950000183134.c.a.a	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000162660.a	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868
P. nyererei	MODERN SPECIES	350														me3 (ENSPNYG00000015188)	creg2 (ENSPNYG00000015174)	MGAT4A (ENSPNYG00000015129) #22	coa5 (ENSPNYG00000015079) #24	si:dkey-4e7.3 (ENSPNYG00000015059)	inpp4aa (ENSPNYG00000014985) #25	si:ch211-229n2.6 (ENSPNYG00000014950)	slc9a2 (ENSPNYG00000014916)	MFSD9 (ENSPNYG00000014868)	tmem182a (ENSPNYG00000014844)	ENSPNYG00000014828	GPR45 (ENSPNYG00000014812)	si:dkeyp-118h3.6 (ENSPNYG00000014795)	FHL2 (ENSPNYG00000014777)	nck2a (ENSPNYG00000014751)	ENSPNYG00000014726	ecrg4a (ENSPNYG00000014718)	uxs1 (ENSPNYG00000014694)
Haplochromini_B	ANCESTRAL SPECIES	17	ENSGT00940000155009.a	ENSGT00940000180067	ENSGT00940000158618	ENSGT00940000160302	ENSGT00940000159616	ENSGT00510000047417.t	ENSGT00510000047417.s	ENSGT00940000157829	ENSGT00950000182900.C	ENSGT00510000047120.fb	ENSGT00950000183105.A	ENSGT00910000144283	ENSGT00950000182866.D.d.a.c.a.h	ENSGT00950000183134.c.a.a	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000162660.a	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868
Zebra mbuna	MODERN SPECIES	1098	ENSMZEG00005022278	SYTL5 (ENSMZEG00005022275)	srpx (ENSMZEG00005022268)	ENSMZEG00005022263	OTC (ENSMZEG00005022259)	GPR161 (ENSMZEG00005022257)	OTC (ENSMZEG00005022228)	GPR161 (ENSMZEG00005022218)	dcaf6 (ENSMZEG00005022216)	mpc2b (ENSMZEG00005022212)	rpl24 (ENSMZEG00005022207)	ENSMZEG00005022203	nxpe3 (ENSMZEG00005022201)	me3 (ENSMZEG00005022197)	creg2 (ENSMZEG00005022193)	MGAT4A (ENSMZEG00005022186) #22	coa5 (ENSMZEG00005022180) #24	si:dkey-4e7.3 (ENSMZEG00005022176)	inpp4aa (ENSMZEG00005022166) #25	si:ch211-229n2.6 (ENSMZEG00005022160)	slc9a2 (ENSMZEG00005022156)	MFSD9 (ENSMZEG00005022154)	tmem182a (ENSMZEG00005022152)	ENSMZEG00005022149	GPR45 (ENSMZEG00005022147)	si:dkeyp-118h3.6 (ENSMZEG00005022144)	FHL2 (ENSMZEG00005022139)	nck2a (ENSMZEG00005022136)	ENSMZEG00005022133	ecrg4a (ENSMZEG00005022131)	uxs1 (ENSMZEG00005022125)
Eastern happy	MODERN SPECIES	7	LANCL3 (ENSACLG00000003280)	xk (ENSACLG00000003267)	DYNLT3 (ENSACLG00000003236)	ENSACLG00000003225	SYTL5 (ENSACLG00000003184)	srpx (ENSACLG00000003162)	ENSACLG00000003028	OTC (ENSACLG00000002992)	gpr161b (ENSACLG00000002956)	dcaf6 (ENSACLG00000002724)	mpc2b (ENSACLG00000002669)	ENSACLG00000002639	rpl24 (ENSACLG00000002583)	ENSACLG00000002572	creg2 (ENSACLG00000002559)	MGAT4A (ENSACLG00000002518) #22	coa5 (ENSACLG00000002488) #24	si:dkey-4e7.3 (ENSACLG00000002473)	si:ch211-229n2.6 (ENSACLG00000002456)	inpp4aa (ENSACLG00000002378) #25	slc9a2 (ENSACLG00000002320)	MFSD9 (ENSACLG00000002313)	tmem182a (ENSACLG00000002301)	ENSACLG00000002290	GPR45 (ENSACLG00000002273)	si:dkeyp-118h3.6 (ENSACLG00000002252)	FHL2 (ENSACLG00000002235)	nck2a (ENSACLG00000002227)	ENSACLG00000002219	ecrg4a (ENSACLG00000002205)	uxs1 (ENSACLG00000002184)
Nile tilapia	MODERN SPECIES	7	LANCL3 (ENSONIG00000014289)	xk (ENSONIG00000033306)	DYNLT3 (ENSONIG00000014284)	SYTL5 (ENSONIG00000014281)	srpx (ENSONIG00000014280)	ENSONIG00000034412	OTC (ENSONIG00000014275)	gpr161b (ENSONIG00000014273)	dcaf6 (ENSONIG00000014268)	rpl24 (ENSONIG00000014266)	mpc2b (ENSONIG00000041689)	cep97 (ENSONIG00000014264)	nxpe3 (ENSONIG00000014263)	me3 (ENSONIG00000014252)	creg2 (ENSONIG00000014249)	MGAT4A (ENSONIG00000014241) #22	coa5 (ENSONIG00000038016) #24	si:dkey-4e7.3 (ENSONIG00000014236)	inpp4aa (ENSONIG00000014230) #25	slc9a2 (ENSONIG00000014228)	mfsd9 (ENSONIG00000014227)	tmem182a (ENSONIG00000014225)	ENSONIG00000020429	GPR45 (ENSONIG00000020428)	si:dkeyp-118h3.6 (ENSONIG00000014223)	FHL2 (ENSONIG00000042852)	nck2a (ENSONIG00000014219)	ENSONIG00000033459	ecrg4a (ENSONIG00000014218)	uxs1 (ENSONIG00000014216)	tmtops2b (ENSONIG00000014214)
Midas cichlid	MODERN SPECIES	650	xk (ENSACIG00000022416)	DYNLT3 (ENSACIG00000022403)	ENSACIG00000022393	ENSACIG00000022386	srpx (ENSACIG00000022363)	ENSACIG00000022350	OTC (ENSACIG00000022336)	gpr161b (ENSACIG00000022322)	dcaf6 (ENSACIG00000022310)	mpc2b (ENSACIG00000022299)	rpl24 (ENSACIG00000022262)	cep97 (ENSACIG00000022238)	nxpe3 (ENSACIG00000022226)	me3 (ENSACIG00000022206)	creg2 (ENSACIG00000022188)	MGAT4A (ENSACIG00000022165) #22	coa5 (ENSACIG00000022143) #24	si:dkey-4e7.3 (ENSACIG00000022121)	inpp4aa (ENSACIG00000022094) #25	si:ch211-229n2.6 (ENSACIG00000022076)	slc9a2 (ENSACIG00000021928)
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Eupercaria	ANCESTRAL SPECIES	18	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000158714.d.a.a
Tetraodon	MODERN SPECIES	13	il1rapl1a (ENSTNIG00000013859)	NR0B1 (ENSTNIG00000013860)	rnaseh2b (ENSTNIG00000013861)	spryd7b (ENSTNIG00000013862)	kpna3 (ENSTNIG00000013863)	rcbtb1 (ENSTNIG00000013864)	MCF2L (ENSTNIG00000013865)	ATP11A (ENSTNIG00000013866)	sox1a (ENSTNIG00000013867)	arhgef7a (ENSTNIG00000013868)	ENSTNIG00000013869	rev1 (ENSTNIG00000013870)	txndc9 (ENSTNIG00000013871)	mrpl30 (ENSTNIG00000013872)	mitd1 (ENSTNIG00000013873)	MGAT4A (ENSTNIG00000013874) #22	coa5 (ENSTNIG00000001478) #24	si:dkey-4e7.3 (ENSTNIG00000001156)	inpp4aa (ENSTNIG00000013875) #25	slc9a2 (ENSTNIG00000013876)	MFSD9 (ENSTNIG00000013877)	tmem182a (ENSTNIG00000013878)	ENSTNIG00000000271	GPR45 (ENSTNIG00000013879)	MAPK12 (ENSTNIG00000013880)	ENSTNIG00000000423	FHL2 (ENSTNIG00000000462)	nck2a (ENSTNIG00000013881)	ecrg4a (ENSTNIG00000013882)	uxs1 (ENSTNIG00000013883)	tmtops2b (ENSTNIG00000000321)
Fugu	MODERN SPECIES		spryd7b (ENSTRUG00000015092)	kpna3 (ENSTRUG00000015005)	rcbtb1 (ENSTRUG00000014969)	ENSTRUG00000024682	MCF2L (ENSTRUG00000014804)	ATP11A (ENSTRUG00000014541)	sox1a (ENSTRUG00000014518)	arhgef7a (ENSTRUG00000014456)	ENSTRUG00000029805	rev1 (ENSTRUG00000014309)	txndc9 (ENSTRUG00000014285)	mrpl30 (ENSTRUG00000022654)	mitd1 (ENSTRUG00000014253)	ENSTRUG00000028354	creg2 (ENSTRUG00000033102)	MGAT4A (ENSTRUG00000014086) #22	coa5 (ENSTRUG00000014082) #24	si:dkey-4e7.3 (ENSTRUG00000022757)	ENSTRUG00000026173	inpp4aa (ENSTRUG00000013844) #25	slc9a2 (ENSTRUG00000013737)	MFSD9 (ENSTRUG00000013712)	tmem182a (ENSTRUG00000013683)	ENSTRUG00000003897	GPR45 (ENSTRUG00000013654)	si:dkeyp-118h3.6 (ENSTRUG00000023190)	FHL2 (ENSTRUG00000013559)	nck2a (ENSTRUG00000013538)	ecrg4a (ENSTRUG00000027159)	uxs1 (ENSTRUG00000022548)	tmtops2b (ENSTRUG00000013462)
Eupecaria_A	ANCESTRAL SPECIES	18	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Ballan wrasse	MODERN SPECIES	305	trim13 (ENSLBEG00000019297)	spryd7b (ENSLBEG00000019266)	kpna3 (ENSLBEG00000019178)	rcbtb1 (ENSLBEG00000019098)	MCF2L (ENSLBEG00000018947)	ATP11A (ENSLBEG00000018719)	sox1a (ENSLBEG00000018628)	arhgef7a (ENSLBEG00000018559)	ENSLBEG00000018497	rev1 (ENSLBEG00000018447)	txndc9 (ENSLBEG00000018412)	mrpl30 (ENSLBEG00000018368)	mitd1 (ENSLBEG00000018339)	ENSLBEG00000018303	creg2 (ENSLBEG00000018280)	MGAT4A (ENSLBEG00000018248) #22	coa5 (ENSLBEG00000018199) #24	si:dkey-4e7.3 (ENSLBEG00000018160)	inpp4aa (ENSLBEG00000017987) #25	slc9a2 (ENSLBEG00000017898)	MFSD9 (ENSLBEG00000017872)	tmem182a (ENSLBEG00000017855)	ENSLBEG00000017830	GPR45 (ENSLBEG00000017812)	si:dkeyp-118h3.6 (ENSLBEG00000017789)	FHL2 (ENSLBEG00000017759)
Eupecaria_B	ANCESTRAL SPECIES	18	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Eupecaria_C	ANCESTRAL SPECIES	21	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Gilthead seabream	MODERN SPECIES	23	spryd7b (ENSSAUG00010009162)	kpna3 (ENSSAUG00010009209)	rcbtb1 (ENSSAUG00010011054)	ENSSAUG00010011203	ENSSAUG00010011205	MCF2L (ENSSAUG00010011223)	ATP11A (ENSSAUG00010016174)	arhgef7a (ENSSAUG00010021310)	ENSSAUG00010021384	rev1 (ENSSAUG00010021387)	txndc9 (ENSSAUG00010021396)	mrpl30 (ENSSAUG00010021398)	mitd1 (ENSSAUG00010021401)	ENSSAUG00010021402	creg2 (ENSSAUG00010021404)	MGAT4A (ENSSAUG00010021406) #22	COA5 (ENSSAUG00010021981) #24	si:dkey-4e7.3 (ENSSAUG00010021982)	inpp4aa (ENSSAUG00010021994) #25	slc9a2 (ENSSAUG00010022015)	MFSD9 (ENSSAUG00010022038)	tmem182a (ENSSAUG00010022040)	ENSSAUG00010022041	GPR45 (ENSSAUG00010022043)	si:dkeyp-118h3.6 (ENSSAUG00010022044)	FHL2 (ENSSAUG00010022045)	nck2a (ENSSAUG00010022046)	ENSSAUG00010022048	ecrg4a (ENSSAUG00010022049)	uxs1 (ENSSAUG00010022058)	tmtops2b (ENSSAUG00010022338)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	18	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000175825	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.b	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868
Large yellow croaker	MODERN SPECIES	490	ENSLCRG00005001143	MCF2L (ENSLCRG00005001172)	ATP11A (ENSLCRG00005004827)	sox1a (ENSLCRG00005006638)	sox1a (ENSLCRG00005006640)	arhgef7a (ENSLCRG00005006650)	ENSLCRG00005009306	rev1 (ENSLCRG00005009309)	txndc9 (ENSLCRG00005009310)	ENSLCRG00005009312	ENSLCRG00005009313	mrpl30 (ENSLCRG00005009314)	mitd1 (ENSLCRG00005009315)	ENSLCRG00005009316	creg2 (ENSLCRG00005009319)	MGAT4A (ENSLCRG00005009344) #22	ENSLCRG00005010329	coa5 (ENSLCRG00005010331) #24	si:dkey-4e7.3 (ENSLCRG00005010332)	LRCH1 (ENSLCRG00005010336)	ENSLCRG00005010342	ENSLCRG00005010349	ENSLCRG00005010350	ENSLCRG00005010352	ENSLCRG00005010353	il10rb (ENSLCRG00005010356)	ENSLCRG00005010358	TMEM50B (ENSLCRG00005010359)	ENSLCRG00005010365	ccdc93 (ENSLCRG00005010392)	ENSLCRG00005011159
European seabass	MODERN SPECIES	5	rnaseh2b (ENSDLAG00005028236)	trim13 (ENSDLAG00005032697)	KPNA3 (ENSDLAG00005020202)	RCBTB1 (ENSDLAG00005019809)	ENSDLAG00005019792	MCF2L (ENSDLAG00005019418)	ATP11A (ENSDLAG00005018843)	SOX1 (ENSDLAG00005018826)	ARHGEF7 (ENSDLAG00005018424)	ENSDLAG00005032548	rev1 (ENSDLAG00005018295)	txndc9 (ENSDLAG00005018270)	mitd1 (ENSDLAG00005027382)	mrpl30 (ENSDLAG00005027441)	ENSDLAG00005029946	MGAT4A (ENSDLAG00005018029) #22	si:dkey-4e7.3 (ENSDLAG00005017997)	inpp4aa (ENSDLAG00005017049) #25	slc9a2 (ENSDLAG00005016359)	MFSD9 (ENSDLAG00005016336)	tmem182a (ENSDLAG00005016330)	ENSDLAG00005016324	GPR45 (ENSDLAG00005029310)	si:dkeyp-118h3.6 (ENSDLAG00005016297)	FHL2 (ENSDLAG00005016283)	nck2a (ENSDLAG00005016267)	ENSDLAG00005016254	ecrg4a (ENSDLAG00005016230)	uxs1 (ENSDLAG00005016009)	tmtops2b (ENSDLAG00005016004)	st6gal2a (ENSDLAG00005015986)
Perciformes	ANCESTRAL SPECIES	20	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000175825	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Cottioidei	ANCESTRAL SPECIES	14	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000175825	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000158714.d.b
Stickleback	MODERN SPECIES	16	spryd7b (ENSGACG00000002826)	kpna3 (ENSGACG00000002834)	rcbtb1 (ENSGACG00000002858)	ENSGACG00000002866	MCF2L (ENSGACG00000002869)	ATP11A (ENSGACG00000002882)	sox1a (ENSGACG00000002889)	arhgef7a (ENSGACG00000002891)	ENSGACG00000002900	rev1 (ENSGACG00000002904)	txndc9 (ENSGACG00000002912)	ENSGACG00000002917	ENSGACG00000002919	mitd1 (ENSGACG00000002921)	creg2 (ENSGACG00000002929)	MGAT4A (ENSGACG00000002932) #22	si:dkey-4e7.3 (ENSGACG00000002945)	inpp4aa (ENSGACG00000002951) #25	slc9a2 (ENSGACG00000002959)	MFSD9 (ENSGACG00000002966)	tmem182a (ENSGACG00000002970)	ENSGACG00000002992	GPR45 (ENSGACG00000002996)	si:dkeyp-118h3.6 (ENSGACG00000003001)	FHL2 (ENSGACG00000003005)	nck2a (ENSGACG00000003022)	ecrg4a (ENSGACG00000003031)	uxs1 (ENSGACG00000003038)	tmtops2b (ENSGACG00000003063)	st6gal2a (ENSGACG00000003067)	jam2b (ENSGACG00000003073)
Lumpfish	MODERN SPECIES	13	trim13 (ENSCLMG00005014611)	spryd7b (ENSCLMG00005014612)	kpna3 (ENSCLMG00005014625)	RCBTB1 (ENSCLMG00005016444)	MCF2L (ENSCLMG00005016477)	ATP11A (ENSCLMG00005018813)	sox1a (ENSCLMG00005018816)	arhgef7a (ENSCLMG00005018834)	ENSCLMG00005019838	rev1 (ENSCLMG00005019840)	txndc9 (ENSCLMG00005019842)	mrpl30 (ENSCLMG00005019845)	mitd1 (ENSCLMG00005019846)	ENSCLMG00005019849	creg2 (ENSCLMG00005019856)	MGAT4A (ENSCLMG00005019895) #22	coa5 (ENSCLMG00005020263) #24	si:dkey-4e7.3 (ENSCLMG00005020264)	inpp4aa (ENSCLMG00005020266) #25	slc9a2 (ENSCLMG00005020272)	MFSD9 (ENSCLMG00005020306)	ENSCLMG00005020307	tmem182a (ENSCLMG00005020308)	ENSCLMG00005020309	GPR45 (ENSCLMG00005020310)	si:dkeyp-118h3.6 (ENSCLMG00005020311)	FHL2 (ENSCLMG00005020312)	nck2a (ENSCLMG00005020313)	ENSCLMG00005020314	uxs1 (ENSCLMG00005020315)	tmtops2b (ENSCLMG00005020330)
Perciformes_a	ANCESTRAL SPECIES	21	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Channel bull blenny	MODERN SPECIES	13	spryd7b (ENSCGOG00000019518)	kpna3 (ENSCGOG00000019569)	rcbtb1 (ENSCGOG00000022023)	MCF2L (ENSCGOG00000022263)	ATP11A (ENSCGOG00000022597)	sox1a (ENSCGOG00000023043)	FASTKD5 (ENSCGOG00000023044)	arhgef7a (ENSCGOG00000023063)	ENSCGOG00000023491	rev1 (ENSCGOG00000023501)	mrpl30 (ENSCGOG00000023567)	txndc9 (ENSCGOG00000023565)	mitd1 (ENSCGOG00000023568)	ENSCGOG00000023577	creg2 (ENSCGOG00000023579)	MGAT4A (ENSCGOG00000023590) #22	inpp4aa (ENSCGOG00000023695) #25	slc9a2 (ENSCGOG00000023728)	MFSD9 (ENSCGOG00000023743)	tmem182a (ENSCGOG00000023745)	ENSCGOG00000023747	GPR45 (ENSCGOG00000023750)	si:dkeyp-118h3.6 (ENSCGOG00000002698)	nck2a (ENSCGOG00000002738)	FHL2 (ENSCGOG00000002757)	ecrg4a (ENSCGOG00000002880)	uxs1 (ENSCGOG00000002903)	tmtops2b (ENSCGOG00000003262)	st6gal2a (ENSCGOG00000003267)	jam2b (ENSCGOG00000003271)	mettl21cb (ENSCGOG00000003274)
Pike perch	MODERN SPECIES	1	rnaseh2b (ENSSLUG00000009532)	trim13 (ENSSLUG00000009548)	spryd7b (ENSSLUG00000009552)	kpna3 (ENSSLUG00000009604)	rcbtb1 (ENSSLUG00000011039)	ENSSLUG00000011162	MCF2L (ENSSLUG00000011277)	ATP11A (ENSSLUG00000003614)	arhgef7a (ENSSLUG00000008929)	rev1 (ENSSLUG00000009060)	txndc9 (ENSSLUG00000009101)	mrpl30 (ENSSLUG00000009108)	mitd1 (ENSSLUG00000009116)	ENSSLUG00000009131	creg2 (ENSSLUG00000009136)	MGAT4A (ENSSLUG00000009153) #22	coa5 (ENSSLUG00000009241) #24	si:dkey-4e7.3 (ENSSLUG00000009246)	inpp4aa (ENSSLUG00000009262) #25	slc9a2 (ENSSLUG00000009319)	MFSD9 (ENSSLUG00000009370)	tmem182a (ENSSLUG00000009373)	ENSSLUG00000009379	GPR45 (ENSSLUG00000009386)	si:dkeyp-118h3.6 (ENSSLUG00000009392)	FHL2 (ENSSLUG00000009398)	nck2a (ENSSLUG00000009401)	ENSSLUG00000009406	ecrg4a (ENSSLUG00000009409)	uxs1 (ENSSLUG00000009454)	tmtops2b (ENSSLUG00000009942)
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Anabantaria	ANCESTRAL SPECIES	14	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Anabantoidei	ANCESTRAL SPECIES	13	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000158714.d.b
Siamese fighting fish	MODERN SPECIES	11	trim13 (ENSBSLG00000005266)	spryd7b (ENSBSLG00000005294)	kpna3 (ENSBSLG00000005583)	rcbtb1 (ENSBSLG00000006396)	MCF2L (ENSBSLG00000006733)	ATP11A (ENSBSLG00000007975)	sox1a (ENSBSLG00000009274)	arhgef7a (ENSBSLG00000009325)	ENSBSLG00000010042	rev1 (ENSBSLG00000010097)	txndc9 (ENSBSLG00000010580)	mrpl30 (ENSBSLG00000010631)	mitd1 (ENSBSLG00000010651)	ENSBSLG00000010722	creg2 (ENSBSLG00000010743)	MGAT4A (ENSBSLG00000010848) #22	coa5 (ENSBSLG00000011596) #24	si:dkey-4e7.3 (ENSBSLG00000011626)	inpp4aa (ENSBSLG00000011678) #25	slc9a2 (ENSBSLG00000011917)	MFSD9 (ENSBSLG00000013048)	tmem182a (ENSBSLG00000013086)	ENSBSLG00000013137	GPR45 (ENSBSLG00000013157)	si:dkeyp-118h3.6 (ENSBSLG00000013177)	FHL2 (ENSBSLG00000013194)	nck2a (ENSBSLG00000013220)	ecrg4a (ENSBSLG00000013277)	uxs1 (ENSBSLG00000013321)	tmtops2b (ENSBSLG00000013423)	st6gal2a (ENSBSLG00000013433)
Climbing perch	MODERN SPECIES	12	spryd7b (ENSATEG00000008399)	KPNA3 (ENSATEG00000008435)	RCBTB1 (ENSATEG00000008508)	ENSATEG00000008579	MCF2L (ENSATEG00000008594)	ATP11A (ENSATEG00000008645)	sox1a (ENSATEG00000008767)	ARHGEF7 (ENSATEG00000008786)	ENSATEG00000008905	rev1 (ENSATEG00000008956)	TXNDC9 (ENSATEG00000008970)	mrpl30 (ENSATEG00000008999)	mitd1 (ENSATEG00000009005)	ENSATEG00000026356	creg2 (ENSATEG00000025467)	MGAT4A (ENSATEG00000009056) #22	coa5 (ENSATEG00000009127) #24	si:dkey-4e7.3 (ENSATEG00000009116)	inpp4aa (ENSATEG00000009171) #25	slc9a2 (ENSATEG00000009275)	MFSD9 (ENSATEG00000009314)	tmem182a (ENSATEG00000009324)	ENSATEG00000009329	GPR45 (ENSATEG00000009341)	si:dkeyp-118h3.6 (ENSATEG00000009349)	FHL2 (ENSATEG00000009384)	nck2a (ENSATEG00000009402)	ecrg4a (ENSATEG00000009419)	uxs1 (ENSATEG00000009425)	tmtops2b (ENSATEG00000009482)	st6gal2a (ENSATEG00000009508)
Zig-zag eel	MODERN SPECIES	13	spryd7b (ENSMAMG00000017086)	KPNA3 (ENSMAMG00000017029)	RCBTB1 (ENSMAMG00000016999)	ENSMAMG00000028183	MCF2L (ENSMAMG00000016959)	ATP11A (ENSMAMG00000016898)	sox1a (ENSMAMG00000016891)	ARHGEF7 (ENSMAMG00000016850)	ENSMAMG00000016840	rev1 (ENSMAMG00000016826)	TXNDC9 (ENSMAMG00000028647)	mrpl30 (ENSMAMG00000024796)	mitd1 (ENSMAMG00000027633)	ENSMAMG00000016769	creg2 (ENSMAMG00000016762)	MGAT4A (ENSMAMG00000016727) #22	coa5 (ENSMAMG00000027891) #24	si:dkey-4e7.3 (ENSMAMG00000028072)	inpp4aa (ENSMAMG00000016659) #25	slc9a2 (ENSMAMG00000016632)	MFSD9 (ENSMAMG00000016623)	tmem182a (ENSMAMG00000016605)	ENSMAMG00000016598	GPR45 (ENSMAMG00000016579)	si:dkeyp-118h3.6 (ENSMAMG00000016562)	FHL2 (ENSMAMG00000026000)	nck2a (ENSMAMG00000016535)	ENSMAMG00000016529	ecrg4a (ENSMAMG00000016523)	uxs1 (ENSMAMG00000016482)	tmtops2b (ENSMAMG00000016465)
Carangaria	ANCESTRAL SPECIES	12	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Carangaria_A	ANCESTRAL SPECIES	11	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Seriola	ANCESTRAL SPECIES	6	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00990000203982	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Yellowtail amberjack	MODERN SPECIES	2701					MCF2L (ENSSLDG00000004784)	ATP11A (ENSSLDG00000004953)	sox1a (ENSSLDG00000005256)	arhgef7a (ENSSLDG00000005312)	ENSSLDG00000005399	rev1 (ENSSLDG00000005463)	txndc9 (ENSSLDG00000005489)	mrpl30 (ENSSLDG00000005509)	mitd1 (ENSSLDG00000005517)	ENSSLDG00000005547	creg2 (ENSSLDG00000005568)	MGAT4A (ENSSLDG00000005594) #22	coa5 (ENSSLDG00000005661) #24	si:dkey-4e7.3 (ENSSLDG00000005697)	inpp4aa (ENSSLDG00000005731) #25	slc9a2 (ENSSLDG00000005795)	MFSD9 (ENSSLDG00000005821)	tmem182a (ENSSLDG00000005832)	ENSSLDG00000005851	GPR45 (ENSSLDG00000005866)	si:dkeyp-118h3.6 (ENSSLDG00000005897)	FHL2 (ENSSLDG00000005880)	nck2a (ENSSLDG00000005918)
Greater amberjack	MODERN SPECIES	21	rnaseh2b (ENSSDUG00000007567)	trim13 (ENSSDUG00000007563)	spryd7b (ENSSDUG00000007546)	kpna3 (ENSSDUG00000007470)	rcbtb1 (ENSSDUG00000007416)	ENSSDUG00000007401	MCF2L (ENSSDUG00000007247)	ATP11A (ENSSDUG00000006896)	sox1a (ENSSDUG00000006843)	arhgef7a (ENSSDUG00000006784)	rev1 (ENSSDUG00000006731)	txndc9 (ENSSDUG00000006714)	mrpl30 (ENSSDUG00000006705)	mitd1 (ENSSDUG00000006686)	creg2 (ENSSDUG00000006678)	MGAT4A (ENSSDUG00000006632) #22	coa5 (ENSSDUG00000006597) #24	si:dkey-4e7.3 (ENSSDUG00000006579)	inpp4aa (ENSSDUG00000006518) #25	slc9a2 (ENSSDUG00000006483)	MFSD9 (ENSSDUG00000006472)	tmem182a (ENSSDUG00000006446)	ENSSDUG00000006431	GPR45 (ENSSDUG00000006419)	si:dkeyp-118h3.6 (ENSSDUG00000006375)	FHL2 (ENSSDUG00000006358)	nck2a (ENSSDUG00000006337)	ENSSDUG00000006333	ecrg4a (ENSSDUG00000006292)	uxs1 (ENSSDUG00000006271)	tmtops2b (ENSSDUG00000006252)
Barramundi perch	MODERN SPECIES	382					MCF2L (ENSLCAG00010005900)	ATP11A (ENSLCAG00010006113)	sox1a (ENSLCAG00010006973)	arhgef7a (ENSLCAG00010007001)	ENSLCAG00010007035	rev1 (ENSLCAG00010007042)	ENSLCAG00010007055	ENSLCAG00010007058	mrpl30 (ENSLCAG00010007067)	mitd1 (ENSLCAG00010007069)	creg2 (ENSLCAG00010007082)	MGAT4A (ENSLCAG00010007096) #22	coa5 (ENSLCAG00010007123) #24	si:dkey-4e7.3 (ENSLCAG00010007128)	inpp4aa (ENSLCAG00010007182) #25	slc9a2 (ENSLCAG00010007282)	MFSD9 (ENSLCAG00010007290)	tmem182a (ENSLCAG00010007295)	ENSLCAG00010007298	GPR45 (ENSLCAG00010007301)	si:dkeyp-118h3.6 (ENSLCAG00010007303)	FHL2 (ENSLCAG00010007311)	nck2a (ENSLCAG00010007325)
Pleuronectoidei	ANCESTRAL SPECIES	9	ENSGT00390000011048	ENSGT01050000244891.C.c.b	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000163665	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a
Tongue sole	MODERN SPECIES	7	grtp1b (ENSCSEG00000004149)	dcun1d2a (ENSCSEG00000004160)	tfdp1a (ENSCSEG00000004170)	grk1a (ENSCSEG00000004181)	mettl21cb (ENSCSEG00000004190)	jam2b (ENSCSEG00000004200)	st6gal2a (ENSCSEG00000004208)	tmtops2b (ENSCSEG00000004215)	uxs1 (ENSCSEG00000004218)	ecrg4a (ENSCSEG00000004235)	mrpl30 (ENSCSEG00000004238)	txndc9 (ENSCSEG00000004242)	mitd1 (ENSCSEG00000004249)	ENSCSEG00000004259	creg2 (ENSCSEG00000004269)	MGAT4A (ENSCSEG00000004275) #22	coa5 (ENSCSEG00000004287) #24	si:dkey-4e7.3 (ENSCSEG00000004285)	inpp4aa (ENSCSEG00000004293) #25	slc9a2 (ENSCSEG00000004322)	MFSD9 (ENSCSEG00000004338)	tmem182a (ENSCSEG00000004342)	ENSCSEG00000004357	GPR45 (ENSCSEG00000004358)	FHL2 (ENSCSEG00000004360)	si:dkeyp-118h3.6 (ENSCSEG00000004362)	nck2a (ENSCSEG00000004366)	rev1 (ENSCSEG00000004373)	arhgef7a (ENSCSEG00000004389)	ENSCSEG00000004395	sox1a (ENSCSEG00000004400)
Turbot	MODERN SPECIES	5	trim13 (ENSSMAG00000028014)	spryd7b (ENSSMAG00000001527)	KPNA3 (ENSSMAG00000001460)	RCBTB1 (ENSSMAG00000001425)	ENSSMAG00000001374	MCF2L (ENSSMAG00000001186)	ATP11A (ENSSMAG00000000950)	sox1a (ENSSMAG00000000930)	ARHGEF7 (ENSSMAG00000000842)	ENSSMAG00000019954	ENSSMAG00000019936	ENSSMAG00000019930	mitd1 (ENSSMAG00000019921)	ENSSMAG00000019911	creg2 (ENSSMAG00000019902)	MGAT4A (ENSSMAG00000019882) #22	coa5 (ENSSMAG00000030200) #24	si:dkey-4e7.3 (ENSSMAG00000019872)	inpp4aa (ENSSMAG00000019841) #25	slc9a2 (ENSSMAG00000019817)	MFSD9 (ENSSMAG00000019813)	tmem182a (ENSSMAG00000028779)	POU3F3 (ENSSMAG00000036495)	GPR45 (ENSSMAG00000019801)	si:dkeyp-118h3.6 (ENSSMAG00000019796)	FHL2 (ENSSMAG00000023656)	nck2a (ENSSMAG00000019775)	ecrg4a (ENSSMAG00000029064)	uxs1 (ENSSMAG00000019732)	tmtops2b (ENSSMAG00000019726)	st6gal2a (ENSSMAG00000036420)
Tiger tail seahorse	MODERN SPECIES	440	trim13 (ENSHCOG00000003413)	ENSHCOG00000003423	spryd7b (ENSHCOG00000000614)	kpna3 (ENSHCOG00000003482)	rcbtb1 (ENSHCOG00000003504)	MCF2L (ENSHCOG00000003543)	ENSHCOG00000003548	ATP11A (ENSHCOG00000003596)	sox1a (ENSHCOG00000000875)	arhgef7a (ENSHCOG00000003631)	rev1 (ENSHCOG00000003672)	ENSHCOG00000003678	mrpl30 (ENSHCOG00000003687)	mitd1 (ENSHCOG00000003704)	creg2 (ENSHCOG00000003718)	MGAT4A (ENSHCOG00000003754) #22	coa5 (ENSHCOG00000003800) #24	si:dkey-4e7.3 (ENSHCOG00000003814)	inpp4aa (ENSHCOG00000003855) #25	slc9a2 (ENSHCOG00000003877)	MFSD9 (ENSHCOG00000003898)	ENSHCOG00000003909	tmem182a (ENSHCOG00000003914)	ENSHCOG00000003928	GPR45 (ENSHCOG00000003938)	si:dkeyp-118h3.6 (ENSHCOG00000003943)	FHL2 (ENSHCOG00000003948)	nck2a (ENSHCOG00000003956)	ecrg4a (ENSHCOG00000003963)	uxs1 (ENSHCOG00000003990)	tmtops2b (ENSHCOG00000003998)
Pinecone sodierfish	MODERN SPECIES	13	rnaseh2b (ENSMMDG00005017240)	trim13 (ENSMMDG00005017235)	spryd7b (ENSMMDG00005017232)	kpna3 (ENSMMDG00005013695)	rcbtb1 (ENSMMDG00005013659)	MCF2L (ENSMMDG00005018096)	ATP11A (ENSMMDG00005018059)	sox1a (ENSMMDG00005018057)	arhgef7a (ENSMMDG00005017439)	rev1 (ENSMMDG00005017425)	txndc9 (ENSMMDG00005017422)	mrpl30 (ENSMMDG00005017421)	mitd1 (ENSMMDG00005017420)	ENSMMDG00005017417	creg2 (ENSMMDG00005017416)	MGAT4A (ENSMMDG00005017387) #22	coa5 (ENSMMDG00005017384) #24	si:dkey-4e7.3 (ENSMMDG00005017381)	inpp4aa (ENSMMDG00005017369) #25	slc9a2 (ENSMMDG00005017329)	MFSD9 (ENSMMDG00005017325)	tmem182a (ENSMMDG00005017317)	ENSMMDG00005017313	GPR45 (ENSMMDG00005017312)	si:dkeyp-118h3.6 (ENSMMDG00005017309)	FHL2 (ENSMMDG00005017299)	nck2a (ENSMMDG00005017296)	ENSMMDG00005017294	ecrg4a (ENSMMDG00005017293)	uxs1 (ENSMMDG00005017234)	tmtops2b (ENSMMDG00005017224)
Cod	MODERN SPECIES	12	trim13 (ENSGMOG00000036710)	spryd7b (ENSGMOG00000016862)	KPNA3 (ENSGMOG00000016870)	ENSGMOG00000022600	ENSGMOG00000027938	MCF2L (ENSGMOG00000012544)	ATP11A (ENSGMOG00000012548)	ARHGEF7 (ENSGMOG00000012557)	ENSGMOG00000028159	REV1 (ENSGMOG00000012562)	TXNDC9 (ENSGMOG00000012569)	MRPL30 (ENSGMOG00000012571)	mitd1 (ENSGMOG00000012573)	ENSGMOG00000033355	creg2 (ENSGMOG00000022677)	MGAT4A (ENSGMOG00000012580) #22	coa5 (ENSGMOG00000026814) #24	si:dkey-4e7.3 (ENSGMOG00000012585)	inpp4aa (ENSGMOG00000012587) #25	slc9a2 (ENSGMOG00000012591)	ENSGMOG00000031678	tmem182a (ENSGMOG00000034452)	ENSGMOG00000022412	ENSGMOG00000026308	ENSGMOG00000025639	ENSGMOG00000035271	ENSGMOG00000003354	ENSGMOG00000002924	ENSGMOG00000002862	ENSGMOG00000029470	ENSGMOG00000025787
Protacanthopterygii	ANCESTRAL SPECIES	86	ENSGT00940000166383.d	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a	ENSGT00940000157874.q.b	ENSGT00940000157849.n.d.a.b	ENSGT00940000157849.n.d.b	ENSGT00940000162479.b	ENSGT00940000155360.B.l	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00390000015645	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b	ENSGT00390000005914.b	ENSGT00940000159177 #22	ENSGT00390000005548 #24	ENSGT00940000164275.e	ENSGT00940000157360.d #25	ENSGT00940000156807.e	ENSGT00940000159390	ENSGT00390000017581.b.a	ENSGT00940000164385.a.a.a.a	ENSGT00950000183001.a.b.b	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a	ENSGT00940000157728.a.b.d	ENSGT00390000000145	ENSGT00940000157868	ENSGT01100000263502.A.a.a.a.b.a.a	ENSGT00940000158714.d.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	295	ENSGT00390000011048.u	ENSGT01050000244891.C.c.b.o.a	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a.a	ENSGT00940000157874.q.b.e.a	ENSGT00940000157849.n.d.a.a	ENSGT00940000162479.b.j.b	ENSGT00940000155360.B.l.f	ENSGT00950000182974.b.f	ENSGT00940000156374.c	ENSGT00390000015645.f	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b.c	ENSGT00390000005914.b.f	ENSGT00940000159177.k #22	ENSGT00940000164275.e.c	ENSGT00940000157360.d.e #25	ENSGT00940000159390.g	ENSGT00390000017581.b.a.c.a	ENSGT00940000164385.a.a.a.a.a	ENSGT00950000183001.a.b.b.j	ENSGT00950000183028.a.a.a.g.a.b	ENSGT00940000157728.a.b.d.a	ENSGT00390000000145.h.a	ENSGT00940000157868.k.b	ENSGT01100000263502.A.a.a.a.b.a.a.j	ENSGT00940000157053.u.b	ENSGT00940000165208.b	ENSGT00940000156596.d.g	ENSGT00940000154652.p.a
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00390000011048.u	ENSGT01050000244891.C.c.b.o.a	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a.a	ENSGT00940000157874.q.b.e.a	ENSGT00940000157849.n.d.a.a	ENSGT00940000162479.b.j.b	ENSGT00940000155360.B.l.f	ENSGT00950000182974.b.f	ENSGT00940000156374.c	ENSGT00390000015645.f	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b.c	ENSGT00390000005914.b.f	ENSGT00940000159177.k #22	ENSGT00940000164275.e.c	ENSGT00940000157360.d.e #25	ENSGT00940000159390.g	ENSGT00390000017581.b.a.c.a	ENSGT00940000164385.a.a.a.a.a	ENSGT00950000183001.a.b.b.j	ENSGT00950000183028.a.a.a.g.a.b	ENSGT00940000157728.a.b.d.a	ENSGT00390000000145.h.a	ENSGT00940000157868.k.b	ENSGT01100000263502.A.a.a.a.b.a.a.j	ENSGT00940000157053.u.b	ENSGT00940000165208.b	ENSGT00940000156596.d.g	ENSGT00940000154652.p.a
Salmo	ANCESTRAL SPECIES	10	ENSGT00390000011048.u	ENSGT01050000244891.C.c.b.o.a	ENSGT00940000155814.n	ENSGT00950000182865.b.a.b.b.b.a.a	ENSGT00940000157874.q.b.e.a	ENSGT00940000157849.n.d.a.a	ENSGT00940000162479.b.j.b	ENSGT00940000155360.B.l.f	ENSGT00950000182974.b.f	ENSGT00940000156374.c	ENSGT00390000015645.f	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b.c	ENSGT00390000005914.b.f	ENSGT00940000159177.k #22	ENSGT00940000164275.e.c	ENSGT00940000157360.d.e #25	ENSGT00940000159390.g	ENSGT00390000017581.b.a.c.a	ENSGT00940000164385.a.a.a.a.a	ENSGT00950000183001.a.b.b.j	ENSGT00950000183028.a.a.a.g.a.b	ENSGT00940000157728.a.b.d.a	ENSGT00940000157868.k.b	ENSGT01100000263502.A.a.a.a.b.a.a.j	ENSGT00940000157053.u.b.c	ENSGT00940000165208.b	ENSGT00990000210160.b.b	ENSGT00940000156596.d.g	ENSGT00940000154652.p.a
River trout	MODERN SPECIES	12	kpna3 (ENSSTUG00000004273)	rcbtb1 (ENSSTUG00000004462)	MCF2L (ENSSTUG00000004646)	ENSSTUG00000008010	ATP11A (ENSSTUG00000008034)	sox1a (ENSSTUG00000008272)	arhgef7a (ENSSTUG00000008293)	ENSSTUG00000008597	rev1 (ENSSTUG00000008627)	ENSSTUG00000008715	txndc9 (ENSSTUG00000008721)	mrpl30 (ENSSTUG00000008732)	mitd1 (ENSSTUG00000008744)	ENSSTUG00000008763	creg2 (ENSSTUG00000008779)	MGAT4A (ENSSTUG00000008790) #22	si:dkey-4e7.3 (ENSSTUG00000008900)	ENSSTUG00000008908	inpp4aa (ENSSTUG00000009025) #25	MFSD9 (ENSSTUG00000011759)	tmem182a (ENSSTUG00000011762)	ENSSTUG00000011767	GPR45 (ENSSTUG00000011771)	FHL2 (ENSSTUG00000011775)	nck2a (ENSSTUG00000011783)	uxs1 (ENSSTUG00000011790)	tmtops2b (ENSSTUG00000011827)	ENSSTUG00000011873	jam2b (ENSSTUG00000011882)	ENSSTUG00000011898	mettl21cb (ENSSTUG00000011921)
Atlantic salmon	MODERN SPECIES	13	ENSSSAG00000084229	KPNA3 (ENSSSAG00000006920)	RCBTB1 (ENSSSAG00000006319)	ENSSSAG00000081489	ENSSSAG00000081445	ENSSSAG00000082665	ENSSSAG00000081197	ENSSSAG00000096634	ENSSSAG00000083430	ENSSSAG00000080958	rev1 (ENSSSAG00000080944)	TXNDC9 (ENSSSAG00000080938)	mrpl30 (ENSSSAG00000097870)	mitd1 (ENSSSAG00000080930)	ENSSSAG00000080927	ENSSSAG00000080908 #22	si:dkey-4e7.3 (ENSSSAG00000110242)	inpp4aa (ENSSSAG00000080849) #25	MFSD9 (ENSSSAG00000085022)	tmem182a (ENSSSAG00000088711)	ENSSSAG00000080842	GPR45 (ENSSSAG00000080840)	FHL2 (ENSSSAG00000080837)	nck2a (ENSSSAG00000080835)	ENSSSAG00000093702	ENSSSAG00000080833	ENSSSAG00000112118	UXS1 (ENSSSAG00000080830)	ENSSSAG00000098456	ENSSSAG00000080820	ENSSSAG00000080812
Oncorhynchus	ANCESTRAL SPECIES	13	ENSGT00390000011048.u	ENSGT01050000244891.C.c.b.o.a	ENSGT00940000155814.n.c	ENSGT00950000182865.b.a.b.b.b.a.a	ENSGT00940000157874.q.b.e.a	ENSGT00940000157849.n.d.a.a	ENSGT00940000162479.b.j.b	ENSGT00940000155360.B.l.f	ENSGT00950000182974.b.f	ENSGT00940000156374.c	ENSGT00390000015645.f	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b.c	ENSGT00390000005914.b.f	ENSGT00940000159177.k #22	ENSGT00940000164275.e.c	ENSGT00940000157360.d.e #25	ENSGT00940000159390.g	ENSGT00390000017581.b.a.c.a	ENSGT00940000164385.a.a.a.a.a	ENSGT00950000183001.a.b.b.j	ENSGT00950000183028.a.a.a.g.a.b	ENSGT00940000157728.a.b.d.a	ENSGT00390000000145.h.a	ENSGT00940000157868.k.b	ENSGT01100000263502.A.a.a.a.b.a.a.j	ENSGT00940000157053.u.b	ENSGT00940000165208.b.d	ENSGT00940000156596.d.g	ENSGT00940000154652.p.a
Oncorhynchus_a	ANCESTRAL SPECIES	11	ENSGT00390000011048.u	ENSGT01050000244891.C.c.b.o.a	ENSGT00940000155814.n.c	ENSGT00950000182865.b.a.b.b.b.a.a	ENSGT00940000157874.q.b.e.a	ENSGT00940000157849.n.d.a.a	ENSGT00940000162479.b.j.b	ENSGT00940000155360.B.l.f	ENSGT00950000182974.b.f	ENSGT00940000156374.c	ENSGT00390000015645.f	ENSGT00940000163829	ENSGT00390000010868	ENSGT00940000163031.b.a.b.c	ENSGT00390000005914.b.f	ENSGT00940000159177.k #22	ENSGT00940000164275.e.c	ENSGT00940000157360.d.e #25	ENSGT00940000159390.g	ENSGT00390000017581.b.a.c.a	ENSGT00940000164385.a.a.a.a.a	ENSGT00950000183001.a.b.b.j	ENSGT00950000183028.a.a.a.g.a.b	ENSGT00940000157728.a.b.d.a	ENSGT00390000000145.h.a	ENSGT00940000157868.k.b	ENSGT01100000263502.A.a.a.a.b.a.a.j	ENSGT00940000157053.u.b	ENSGT00940000165208.b.d	ENSGT00940000156596.d.g	ENSGT00940000154652.p.a
Coho salmon	MODERN SPECIES	18	ENSOKIG00005027363	RCBTB1 (ENSOKIG00005026997)	ENSOKIG00005026942	ENSOKIG00005026930	MCF2L (ENSOKIG00005026525)	ATP11A (ENSOKIG00005021610)	sox1a (ENSOKIG00005021288)	ARHGEF7 (ENSOKIG00005020571)	ENSOKIG00005020512	rev1 (ENSOKIG00005020430)	txndc9 (ENSOKIG00005020394)	mrpl30 (ENSOKIG00005020371)	mitd1 (ENSOKIG00005020343)	ENSOKIG00005020319	creg2 (ENSOKIG00005020299)	MGAT4A (ENSOKIG00005020177) #22	si:dkey-4e7.3 (ENSOKIG00005020145)	inpp4aa (ENSOKIG00005013996) #25	MFSD9 (ENSOKIG00005013710)	tmem182a (ENSOKIG00005013703)	ENSOKIG00005013689	GPR45 (ENSOKIG00005013686)	FHL2 (ENSOKIG00005013678)	nck2a (ENSOKIG00005013671)	UXS1 (ENSOKIG00005013646)	tmtops2b (ENSOKIG00005013551)	ENSOKIG00005013534	jam2b (ENSOKIG00005013509)	mettl21cb (ENSOKIG00005013500)	tfdp1a (ENSOKIG00005013436)	dcun1d2a (ENSOKIG00005013369)
Chinook salmon	MODERN SPECIES	18	kpna3 (ENSOTSG00005010720)	rcbtb1 (ENSOTSG00005010689)	ENSOTSG00005010682	MCF2L (ENSOTSG00005010657)	ATP11A (ENSOTSG00005009914)	sox1a (ENSOTSG00005009910)	arhgef7a (ENSOTSG00005009075)	ENSOTSG00005009073	rev1 (ENSOTSG00005009072)	txndc9 (ENSOTSG00005009069)	ENSOTSG00005009068	mrpl30 (ENSOTSG00005009067)	mitd1 (ENSOTSG00005009064)	ENSOTSG00005009062	creg2 (ENSOTSG00005009061)	MGAT4A (ENSOTSG00005009055) #22	si:dkey-4e7.3 (ENSOTSG00005009053)	inpp4aa (ENSOTSG00005003125) #25	MFSD9 (ENSOTSG00005003026)	tmem182a (ENSOTSG00005002658)	ENSOTSG00005045637	GPR45 (ENSOTSG00005045636)	FHL2 (ENSOTSG00005045635)	NCK2 (ENSOTSG00005045611)	ecrg4a (ENSOTSG00005045609)	tmtops2b (ENSOTSG00005045608)	ENSOTSG00005045606	jam2b (ENSOTSG00005045605)	mettl21cb (ENSOTSG00005045603)	tfdp1a (ENSOTSG00005045591)	dcun1d2a (ENSOTSG00005045589)
Rainbow trout	MODERN SPECIES	14	ENSOMYG00000037826	MCF2L (ENSOMYG00000038075)	ENSOMYG00000053213	ENSOMYG00000054618	ATP11A (ENSOMYG00000039701)	sox1a (ENSOMYG00000043277)	ENSOMYG00000071695	ARHGEF7 (ENSOMYG00000043423)	ENSOMYG00000044214	rev1 (ENSOMYG00000044224)	TXNDC9 (ENSOMYG00000044240)	mrpl30 (ENSOMYG00000044247)	mitd1 (ENSOMYG00000044254)	ENSOMYG00000044263	creg2 (ENSOMYG00000044279)	ENSOMYG00000044300 #22	ENSOMYG00000065385	si:dkey-4e7.3 (ENSOMYG00000044407)	inpp4aa (ENSOMYG00000044474) #25	ENSOMYG00000033720	MFSD9 (ENSOMYG00000044871)	tmem182a (ENSOMYG00000006603)	ENSOMYG00000044877	GPR45 (ENSOMYG00000044883)	FHL2 (ENSOMYG00000044887)	nck2a (ENSOMYG00000044892)	ecrg4a (ENSOMYG00000044894)	tmtops2b (ENSOMYG00000044900)	ENSOMYG00000044910	ENSOMYG00000054941	jam2b (ENSOMYG00000044919)
Huchen	MODERN SPECIES	1903								ENSHHUG00000028544	ENSHHUG00000028548	rev1 (ENSHHUG00000028553)	txndc9 (ENSHHUG00000028621)	MRPL30 (ENSHHUG00000028627)	mitd1 (ENSHHUG00000028634)	ENSHHUG00000028659	creg2 (ENSHHUG00000028679)	MGAT4A (ENSHHUG00000000035) #22	si:dkey-4e7.3 (ENSHHUG00000000206)	inpp4aa (ENSHHUG00000000225) #25	MFSD9 (ENSHHUG00000001204)
Salmoninae	ANCESTRAL SPECIES	288						ENSGT00940000157874.q.b.e.b	ENSGT00940000157849.n.d.a.b	ENSGT00940000162479.b.j.a	ENSGT00940000155360.B.l.e	ENSGT00950000182974.b.e	ENSGT00940000156374.d	ENSGT00390000015645.e	ENSGT01060000253448	ENSGT00940000163031.b.a.b.d	ENSGT00390000005914.b.e	ENSGT00940000159177.l #22	ENSGT00390000005548 #24	ENSGT00940000164275.e.d	ENSGT00940000157360.d.f #25	ENSGT00940000156807.e	ENSGT00940000159390.h	ENSGT00390000017581.b.a.c.b	ENSGT00940000164385.a.a.a.a.b	ENSGT00950000183001.a.b.b.i	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a.a	ENSGT00940000157728.a.b.d.b	ENSGT01100000263996	ENSGT00390000000145.h.b	ENSGT00940000157868.k.a	ENSGT01100000263502.A.a.a.a.b.a.a.i.a.a
Huchen	MODERN SPECIES	2096													ENSHHUG00000019171	ENSHHUG00000019175	creg2 (ENSHHUG00000019203)	MGAT4A (ENSHHUG00000019217) #22	coa5 (ENSHHUG00000019354) #24	inpp4aa (ENSHHUG00000019384) #25	slc9a2 (ENSHHUG00000019591)
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000159715.g	ENSGT00390000011048.t	ENSGT01050000244891.C.c.b.o.b	ENSGT00940000166383.d	ENSGT00950000182865.b.a.b.b.b.a.b	ENSGT00940000157874.q.b.f	ENSGT00940000157874.q.b.e.b	ENSGT00940000157849.n.d.a.b	ENSGT00940000162479.b.j.a	ENSGT00940000155360.B.l.e	ENSGT00950000182974.b.e	ENSGT00940000156374.d	ENSGT00390000015645.e	ENSGT00940000163031.b.a.b.d	ENSGT00390000005914.b.e	ENSGT00940000159177.l #22	ENSGT00390000005548 #24	ENSGT00940000164275.e.d	ENSGT00940000157360.d.f #25	ENSGT00940000156807.e	ENSGT00940000159390.h	ENSGT00390000017581.b.a.c.b	ENSGT00940000164385.a.a.a.a.b	ENSGT00950000183001.a.b.b.i	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a.a	ENSGT00940000157728.a.b.d.b	ENSGT01100000263996	ENSGT00390000000145.h.b	ENSGT00940000157868.k.a	ENSGT01100000263502.A.a.a.a.b.a.a.i.b
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00940000159715.g	ENSGT00390000011048.t	ENSGT01050000244891.C.c.b.o.b	ENSGT00940000166383.d	ENSGT00940000155814.n.d	ENSGT00950000182865.b.a.b.b.b.a.b	ENSGT00940000161734.p	ENSGT00940000157849.n.d.a.b	ENSGT00940000162479.b.j.a	ENSGT00940000155360.B.l.e	ENSGT00950000182974.b.e	ENSGT00940000156374.d	ENSGT00390000015645.e	ENSGT00940000163031.b.a.b.d	ENSGT00390000005914.b.e	ENSGT00940000159177.l #22	ENSGT00390000005548 #24	ENSGT00940000164275.e.d	ENSGT00940000157360.d.f #25	ENSGT00940000156807.e	ENSGT00940000159390.h	ENSGT00390000017581.b.a.c.b	ENSGT00940000164385.a.a.a.a.b	ENSGT00950000183001.a.b.b.i	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a.a	ENSGT00940000157728.a.b.d.b	ENSGT01100000263996	ENSGT00390000000145.h.b	ENSGT00940000157868.k.a	ENSGT01100000263502.A.a.a.a.b.a.a.i.a.b
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00940000159715.g	ENSGT00390000011048.t	ENSGT01050000244891.C.c.b.o.b	ENSGT00940000166383.d	ENSGT00940000155814.n.d	ENSGT00950000182865.b.a.b.b.b.a.b	ENSGT00940000161734.p	ENSGT00940000157849.n.d.a.b	ENSGT00940000162479.b.j.a	ENSGT00940000155360.B.l.e	ENSGT00950000182974.b.e	ENSGT00940000156374.d	ENSGT00390000015645.e	ENSGT00940000163031.b.a.b.d	ENSGT00390000005914.b.e	ENSGT00940000159177.l #22	ENSGT00390000005548 #24	ENSGT00940000164275.e.d	ENSGT00940000157360.d.f #25	ENSGT00940000156807.e	ENSGT00940000159390.h	ENSGT00390000017581.b.a.c.b	ENSGT00940000164385.a.a.a.a.b	ENSGT00950000183001.a.b.b.i	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a.a	ENSGT00940000157728.a.b.d.b	ENSGT01100000263996	ENSGT00390000000145.h.b	ENSGT00940000157868.k.a	ENSGT01100000263502.A.a.a.a.b.a.a.i.a.b
Chinook salmon	MODERN SPECIES	22	kpna3 (ENSOTSG00005007262)	il1rapl1a (ENSOTSG00005007267)	NR0B1 (ENSOTSG00005007268)	ENSOTSG00005007269	rnaseh2b (ENSOTSG00005007270)	trim13 (ENSOTSG00005007273)	spryd7b (ENSOTSG00005007275)	ENSOTSG00005007276	ATP11A (ENSOTSG00005007297)	sox1a (ENSOTSG00005010912)	rev1 (ENSOTSG00005010914)	txndc9 (ENSOTSG00005010922)	ENSOTSG00005010923	creg2 (ENSOTSG00005010924)	ENSOTSG00005010930	MGAT4A (ENSOTSG00005010933) #22	coa5 (ENSOTSG00005010940) #24	si:dkey-4e7.3 (ENSOTSG00005010944)	inpp4aa (ENSOTSG00005011135) #25	slc9a2 (ENSOTSG00005011137)	MFSD9 (ENSOTSG00005011504)	tmem182a (ENSOTSG00005011505)	ENSOTSG00005011506	GPR45 (ENSOTSG00005011508)	si:dkeyp-118h3.6 (ENSOTSG00005011509)	FHL2 (ENSOTSG00005011512)	NCK2 (ENSOTSG00005011516)	ENSOTSG00005011539	ecrg4a (ENSOTSG00005011540)	uxs1 (ENSOTSG00005011541)	tmtops2b (ENSOTSG00005011546)
Coho salmon	MODERN SPECIES	11	trim13 (ENSOKIG00005036444)	spryd7b (ENSOKIG00005036452)	KPNA3 (ENSOKIG00005036484)	ENSOKIG00005036651	ENSOKIG00005036748	ATP11A (ENSOKIG00005037054)	sox1a (ENSOKIG00005043084)	ARHGEF7 (ENSOKIG00005043157)	ENSOKIG00005044236	ENSOKIG00005044250	ENSOKIG00005044262	TXNDC9 (ENSOKIG00005044269)	ENSOKIG00005044287	ENSOKIG00005044298	creg2 (ENSOKIG00005044307)	MGAT4A (ENSOKIG00005044378) #22	coa5 (ENSOKIG00005044940) #24	ENSOKIG00005044953	inpp4aa (ENSOKIG00005000253) #25	slc9a2 (ENSOKIG00005000359)	MFSD9 (ENSOKIG00005000428)	ENSOKIG00005000434	ENSOKIG00005000441	GPR45 (ENSOKIG00005000449)	si:dkeyp-118h3.6 (ENSOKIG00005000453)	FHL2 (ENSOKIG00005000461)	nck2a (ENSOKIG00005000469)	ecrg4a (ENSOKIG00005000472)	uxs1 (ENSOKIG00005000512)	tmtops2b (ENSOKIG00005000623)	st6gal2a (ENSOKIG00005000642)
Rainbow trout	MODERN SPECIES	21	ENSOMYG00000002821	ENSOMYG00000060270	MCF2L (ENSOMYG00000049026)	ATP11A (ENSOMYG00000003084)	ENSOMYG00000048694	ENSOMYG00000075333	sox1a (ENSOMYG00000003510)	ARHGEF7 (ENSOMYG00000063425)	ENSOMYG00000057690	ENSOMYG00000073374	ENSOMYG00000003538	ENSOMYG00000062523	ENSOMYG00000003641	ENSOMYG00000054378	creg2 (ENSOMYG00000003692)	MGAT4A (ENSOMYG00000004916) #22	coa5 (ENSOMYG00000006167) #24	si:dkey-4e7.3 (ENSOMYG00000006304)	inpp4aa (ENSOMYG00000006450) #25	slc9a2 (ENSOMYG00000006542)	ENSOMYG00000056485	ENSOMYG00000006635	ENSOMYG00000067134	si:dkeyp-118h3.6 (ENSOMYG00000006666)	FHL2 (ENSOMYG00000006709)	nck2a (ENSOMYG00000006799)	ENSOMYG00000020512	ecrg4a (ENSOMYG00000006828)	uxs1 (ENSOMYG00000006925)	tmtops2b (ENSOMYG00000007022)	st6gal2a (ENSOMYG00000007142)
Salmo	ANCESTRAL SPECIES	15	ENSGT00390000011439.a	ENSGT00940000159715.g	ENSGT00390000011048.t	ENSGT01050000244891.C.c.b.o.b	ENSGT00940000166383.d	ENSGT00950000182865.b.a.b.b.b.a.b	ENSGT00940000157874.q.b.f	ENSGT00940000157874.q.b.e.b	ENSGT00940000157849.n.d.a.b	ENSGT00940000155360.B.l.e	ENSGT00950000182974.b.e	ENSGT00940000156374.d	ENSGT00390000015645.e	ENSGT00940000163031.b.a.b.d	ENSGT00390000005914.b.e	ENSGT00940000159177.l #22	ENSGT00390000005548 #24	ENSGT00940000157360.d.f #25	ENSGT00940000156807.e	ENSGT00940000159390.h	ENSGT00390000017581.b.a.c.b	ENSGT00940000164385.a.a.a.a.b	ENSGT00950000183001.a.b.b.i	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.a.a	ENSGT00940000157728.a.b.d.b	ENSGT01100000263996	ENSGT00390000000145.h.b	ENSGT00940000157868.k.a	ENSGT01100000263502.A.a.a.a.b.a.a.i.b	ENSGT00940000158714.d.b
Atlantic salmon	MODERN SPECIES	17	NR0B1 (ENSSSAG00000105840)	ENSSSAG00000048770	spryd7b (ENSSSAG00000049124)	trim13 (ENSSSAG00000049116)	KPNA3 (ENSSSAG00000049183)	ENSSSAG00000115822	ENSSSAG00000049964	ENSSSAG00000102422	ENSSSAG00000050161	ENSSSAG00000080971	ENSSSAG00000054330	ENSSSAG00000054410	txndc9 (ENSSSAG00000057052)	ENSSSAG00000095539	creg2 (ENSSSAG00000057053)	ENSSSAG00000057082 #22	si:dkey-4e7.3 (ENSSSAG00000086890)	inpp4aa (ENSSSAG00000057705) #25	slc9a2 (ENSSSAG00000066477)	mfsd9 (ENSSSAG00000067218)	tmem182a (ENSSSAG00000108069)	fhl2 (ENSSSAG00000067236)	ENSSSAG00000113492	GPR45 (ENSSSAG00000084938)	ENSSSAG00000105481	nck2a (ENSSSAG00000067238)	ENSSSAG00000067240	ecrg4a (ENSSSAG00000067245)	uxs1 (ENSSSAG00000067252)	tmtops2b (ENSSSAG00000067287)	st6gal2a (ENSSSAG00000118445)
River trout	MODERN SPECIES	16	spryd7b (ENSSTUG00000004476)	kpna3 (ENSSTUG00000004488)	ENSSTUG00000004543	ENSSTUG00000004545	ENSSTUG00000004584	ATP11A (ENSSTUG00000004727)	ENSSTUG00000008825	ENSSTUG00000008829	sox1a (ENSSTUG00000008840)	ENSSTUG00000008850	rev1 (ENSSTUG00000008877)	txndc9 (ENSSTUG00000009052)	ENSSTUG00000009057	ENSSTUG00000009069	creg2 (ENSSTUG00000009092)	MGAT4A (ENSSTUG00000009189) #22	coa5 (ENSSTUG00000009771) #24	inpp4aa (ENSSTUG00000009835) #25	slc9a2 (ENSSTUG00000012417)	MFSD9 (ENSSTUG00000012708)	tmem182a (ENSSTUG00000012717)	ENSSTUG00000012759	si:dkeyp-118h3.6 (ENSSTUG00000012764)	FHL2 (ENSSTUG00000012766)	nck2a (ENSSTUG00000012801)	ENSSTUG00000012808	ecrg4a (ENSSTUG00000012817)	uxs1 (ENSSTUG00000012849)	tmtops2b (ENSSTUG00000013390)	ENSSTUG00000013426	ENSSTUG00000013435
Northern pike	MODERN SPECIES	15	spryd7b (ENSELUG00000019611)	kpna3 (ENSELUG00000019677)	rcbtb1 (ENSELUG00000019740)	ENSELUG00000019693	MCF2L (ENSELUG00000019792)	ATP11A (ENSELUG00000019927)	sox1a (ENSELUG00000019950)	arhgef7a (ENSELUG00000020052)	ENSELUG00000020087	rev1 (ENSELUG00000020161)	txndc9 (ENSELUG00000020190)	RM30 (ENSELUG00000028324)	mitd1 (ENSELUG00000020259)	ENSELUG00000020279	creg2 (ENSELUG00000020293)	MGAT4A (ENSELUG00000020333) #22	coa5 (ENSELUG00000020349) #24	si:dkey-4e7.3 (ENSELUG00000020363)	inpp4aa (ENSELUG00000020402) #25	ENSELUG00000032616	slc9a2 (ENSELUG00000020477)	MFSD9 (ENSELUG00000020485)	tmem182a (ENSELUG00000001272)	ENSELUG00000020495	GPR45 (ENSELUG00000020508)	si:dkeyp-118h3.6 (ENSELUG00000020535)	FHL2 (ENSELUG00000020555)	nck2a (ENSELUG00000020579)	ENSELUG00000027875	ECRG4 (ENSELUG00000034561)	uxs1 (ENSELUG00000020652)
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	32	ENSGT00940000153676.b	ENSGT00390000004360.a.b.a.a.b.e	ENSGT00940000157874.r	ENSGT00940000157872	ENSGT00940000157849.k	ENSGT00940000162479.b	ENSGT00940000155360.B.j	ENSGT00950000182974.b	ENSGT00940000156374	ENSGT00940000163243	ENSGT00390000010868	ENSGT00390000008846	ENSGT00940000159205 #20	ENSGT00940000163031.b.a.a	ENSGT00390000005914.b	ENSGT00940000159177.m #22	ENSGT00390000018553 #23	ENSGT00940000164275.e.a	ENSGT00940000157360.a #25	ENSGT00940000156807.g	ENSGT00940000159390	ENSGT00390000017581.b	ENSGT00940000164385.a.a.a.b.b	ENSGT00390000011204	ENSGT00390000007488	ENSGT00950000183028.a.a.a.g.b.b	ENSGT01030000235464	ENSGT00940000157728.a.a.k	ENSGT00940000157728.a.a.l	ENSGT00970000193621	ENSGT00390000000145
Asian bonytongue	MODERN SPECIES		cab39l (ENSSFOG00015001102)	MCF2L (ENSSFOG00015001050)	tubgcp3 (ENSSFOG00015000966)	ATP11A (ENSSFOG00015000752)	sox1b (ENSSFOG00015010680)	ARHGEF7 (ENSSFOG00015000626)	ENSSFOG00015000615	rev1 (ENSSFOG00015000610)	ENSSFOG00015000594	ENSSFOG00015000570	mitd1 (ENSSFOG00015000536)	lipt1 (ENSSFOG00015000518)	tsga10 (ENSSFOG00015000509) #20	ENSSFOG00015000430 #21	creg2 (ENSSFOG00015029847)	MGAT4A (ENSSFOG00015000345) #22	si:dkey-4e7.3 (ENSSFOG00015000329)	INPP4A (ENSSFOG00015000226) #25	slc9a2 (ENSSFOG00015000121)	MFSD9 (ENSSFOG00015000113)	tmem182a (ENSSFOG00015000109)	pou3f3b (ENSSFOG00015025403)	mrps9 (ENSSFOG00015023159)	si:dkeyp-118h3.6 (ENSSFOG00015028786)	FHL2 (ENSSFOG00015023146)	nck2b (ENSSFOG00015024726)	ENSSFOG00015023136	ecrg4a (ENSSFOG00015023132)	uxs1 (ENSSFOG00015023127)	ENSSFOG00015011280	st6gal2a (ENSSFOG00015023112)
P. kingsleyae	MODERN SPECIES		ENSPKIG00000012319	rcbtb1 (ENSPKIG00000012257)	ENSPKIG00000012180	cab39l (ENSPKIG00000012122)	MCF2L (ENSPKIG00000012037)	tubgcp3 (ENSPKIG00000011878)	ATP11A (ENSPKIG00000011633)	ARHGEF7 (ENSPKIG00000011301)	ENSPKIG00000011220	rev1 (ENSPKIG00000011180)	ENSPKIG00000011133	lipt1 (ENSPKIG00000011118)	mitd1 (ENSPKIG00000011102)	tsga10 (ENSPKIG00000011073) #20	ENSPKIG00000011021	MGAT4A (ENSPKIG00000010966) #22	unc50 (ENSPKIG00000010941) #23	si:dkey-4e7.3 (ENSPKIG00000010924)	INPP4A (ENSPKIG00000010785) #25	slc9a2 (ENSPKIG00000010686)	MFSD9 (ENSPKIG00000010634)	tmem182a (ENSPKIG00000010605)	ENSPKIG00000010582	pou3f3b (ENSPKIG00000010566)	mrps9 (ENSPKIG00000010542)	si:dkeyp-118h3.6 (ENSPKIG00000010523)	ENSPKIG00000010509	nck2a (ENSPKIG00000010488)	ecrg4a (ENSPKIG00000010463)	uxs1 (ENSPKIG00000010421)	st6gal2a (ENSPKIG00000010361)
Osteoglossiformes	ANCESTRAL SPECIES	379												ENSGT00940000157849.l	ENSGT00940000155360.B.i	ENSGT00390000015645	ENSGT00940000163829	ENSGT00940000159177.n #22	ENSGT00390000005548 #24	ENSGT00940000164275.e.b	ENSGT00940000157360.b #25	ENSGT00940000156807.h	ENSGT00940000164385.a.a.a.b.a	ENSGT00950000183001.a.b.b	ENSGT00530000063596.A.i	ENSGT00950000183028.a.a.a.g.b.a
Asian bonytongue	MODERN SPECIES	5	FILIP1L (ENSSFOG00015010150)	IL1RAPL1 (ENSSFOG00015010161)	nr0b1 (ENSSFOG00015030959)	rnaseh2b (ENSSFOG00015010190)	dleu7 (ENSSFOG00015010221)	trim13 (ENSSFOG00015010232)	SPRYD7 (ENSSFOG00015010238)	kpna3 (ENSSFOG00015010262)	rcbtb1 (ENSSFOG00015030528)	cdadc1 (ENSSFOG00015028089)	MCF2L (ENSSFOG00015010397)	ATP11A (ENSSFOG00015010486)	ARHGEF7 (ENSSFOG00015010764)	txndc9 (ENSSFOG00015010960)	mrpl30 (ENSSFOG00015027487)	MGAT4A (ENSSFOG00015010985) #22	coa5 (ENSSFOG00015011032) #24	si:dkey-4e7.3 (ENSSFOG00015011049)	INPP4A (ENSSFOG00015011105) #25	pou3f3b (ENSSFOG00015031593)	GPR45 (ENSSFOG00015011211)	tgfbrap1 (ENSSFOG00015011218)	fhl2b (ENSSFOG00015011237)	ENSSFOG00015028132	nck2b (ENSSFOG00015028086)	ECRG4 (ENSSFOG00015011262)	ENSSFOG00015032102	ST6GAL2 (ENSSFOG00015011460)	ENSSFOG00015011466	CCKBR (ENSSFOG00015011493)	NALF1 (ENSSFOG00015012851)
P. kingsleyae	MODERN SPECIES	127	nr0b1 (ENSPKIG00000013421)	rnaseh2b (ENSPKIG00000013386)	trim13 (ENSPKIG00000013357)	SPRYD7 (ENSPKIG00000013321)	kpna3 (ENSPKIG00000013244)	rcbtb1 (ENSPKIG00000013163)	cdadc1 (ENSPKIG00000013133)	CAB39L (ENSPKIG00000013086)	MCF2L (ENSPKIG00000013023)	ENSPKIG00000012982	ATP11A (ENSPKIG00000012753)	ENSPKIG00000012624	ARHGEF7 (ENSPKIG00000012477)	txndc9 (ENSPKIG00000012396)	mrpl30 (ENSPKIG00000012379)	MGAT4A (ENSPKIG00000012322) #22	coa5 (ENSPKIG00000012293) #24	si:dkey-4e7.3 (ENSPKIG00000012264)	INPP4A (ENSPKIG00000012052) #25	slc9a2 (ENSPKIG00000011951)	ENSPKIG00000011935	pou3f3b (ENSPKIG00000011908)	GPR45 (ENSPKIG00000011893)	tgfbrap1 (ENSPKIG00000011847)	fhl2b (ENSPKIG00000011824)	ENSPKIG00000011807	nck2b (ENSPKIG00000011794)	ecrg4a (ENSPKIG00000011787)	tmtops2b (ENSPKIG00000011772)	ST6GAL2 (ENSPKIG00000011732)	ENSPKIG00000011712
Spotted gar	MODERN SPECIES	655	u2af1 (ENSLOCG00000001191)	cbsb (ENSLOCG00000001205)	cryaa (ENSLOCG00000001257)	sik1 (ENSLOCG00000001279)	HSF2BP (ENSLOCG00000001309)	ENSLOCG00000001338	rev1 (ENSLOCG00000001353)	EIF5B (ENSLOCG00000001405)	txndc9 (ENSLOCG00000001434)	mrpl30 (ENSLOCG00000001452)	mitd1 (ENSLOCG00000001479)	lipt1 (ENSLOCG00000017769)	tsga10 (ENSLOCG00000001500) #20	ENSLOCG00000001520	creg2 (ENSLOCG00000001535)	MGAT4A (ENSLOCG00000001549) #22	unc50 (ENSLOCG00000001604) #23	coa5 (ENSLOCG00000001639) #24	SLC19A2 (ENSLOCG00000001660)	f5 (ENSLOCG00000001675)	atg3 (ENSLOCG00000001724)	slc35a5 (ENSLOCG00000001739)	ccdc80 (ENSLOCG00000001769)	DIPK2B (ENSLOCG00000001785)	KDM6A (ENSLOCG00000001802)	fundc1 (ENSLOCG00000001923)	efhc2 (ENSLOCG00000001949)	ENSLOCG00000001980	mao (ENSLOCG00000001995)	caska (ENSLOCG00000002012)	ENSLOCG00000002103
Reedfish	MODERN SPECIES	12	RDX (ENSECRG00000004684)	FDX1 (ENSECRG00000004719)	ARHGAP20 (ENSECRG00000004759)	PDCL3 (ENSECRG00000004963)	chst10 (ENSECRG00000004969)	LONRF2 (ENSECRG00000004977)	ENSECRG00000004994	rev1 (ENSECRG00000005010)	EIF5B (ENSECRG00000005048)	txndc9 (ENSECRG00000005091)	mrpl30 (ENSECRG00000000812)	mitd1 (ENSECRG00000000841)	lipt1 (ENSECRG00000000863)	TSGA10 (ENSECRG00000000915) #20	ENSECRG00000000967 #21	MGAT4A (ENSECRG00000001021) #22	unc50 (ENSECRG00000001072) #23	coa5 (ENSECRG00000001092) #24	si:dkey-4e7.3 (ENSECRG00000001105)	si:dkey-4e7.3 (ENSECRG00000001125)	inpp4ab (ENSECRG00000001149) #25	slc9a2 (ENSECRG00000001207)	MFSD9 (ENSECRG00000001251)	tmem182a (ENSECRG00000001300)	ENSECRG00000001375	pou3f3b (ENSECRG00000001402)	mrps9 (ENSECRG00000001413)	GPR45 (ENSECRG00000001439)	tgfbrap1 (ENSECRG00000001453)	si:dkeyp-118h3.6 (ENSECRG00000001475)	fhl2b (ENSECRG00000001499)
Elephant shark	MODERN SPECIES	1503	ENSCMIG00000018026	ucp2 (ENSCMIG00000018023)	ENSCMIG00000018021	ENSCMIG00000018015	ENSCMIG00000018010	ppme1 (ENSCMIG00000018008)	P4HA3 (ENSCMIG00000018001)	ENSCMIG00000017998	ENSCMIG00000017993	ndufc2 (ENSCMIG00000017991)	alg8 (ENSCMIG00000017982)	ENSCMIG00000017980	lipt1 (ENSCMIG00000017978)	ENSCMIG00000017977	ENSCMIG00000017976 #21	MGAT4A (ENSCMIG00000017973) #22	unc50 (ENSCMIG00000017970) #23	ENSCMIG00000017969	inpp4ab (ENSCMIG00000017925) #25	si:dkey-4e7.3 (ENSCMIG00000017901)	ENSCMIG00000017899	ENSCMIG00000017895	TMEM131 (ENSCMIG00000017844) #28	ENSCMIG00000017799	ENSCMIG00000017798 #27	ENSCMIG00000017796 #27	ENSCMIG00000017791 #27	CNGA3 (ENSCMIG00000017789) #26	ube3a (ENSCMIG00000017756)	ATP10A (ENSCMIG00000017712)	ENSCMIG00000017700