Rodentia	ANCESTRAL SPECIES	5	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896 #30	ENSGT00940000153331 #31	ENSGT00500000045764	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686	ENSGT00390000008751.a	ENSGT00530000063718.a.b
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896 #30	ENSGT00940000153331 #31	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686	ENSGT00390000008751.a	ENSGT00530000063718.a.b	ENSGT00940000158004
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896 #30	ENSGT00940000153331.y.b #31	ENSGT00940000153331.y.a #35	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686	ENSGT00390000008751.a	ENSGT00530000063718.a.b
Muroidea	ANCESTRAL SPECIES	5	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896 #30	ENSGT00940000153331.y.b.b #31	ENSGT00940000153331.y.b.a.a ##31	ENSGT00940000153331.y.b.a.b #34	ENSGT00940000153331.y.a #35	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896 #30	ENSGT00940000153331.y.b.a.a ##31	ENSGT00940000153331.y.b.b #31	ENSGT00940000153331.y.b.a.b #34	ENSGT00940000153331.y.a #35	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896.h #30	ENSGT00940000153331.y.b.b #31	ENSGT00940000153331.y.b.a.a ##31	ENSGT00940000153331.y.b.a.b #34	ENSGT00940000153331.y.a #35	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896.h #30	ENSGT00940000153331.y.b.b #31	ENSGT00940000153331.y.a #35	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686	ENSGT00390000008751.a	ENSGT00530000063718.a.b
Chinese hamster chok1gshd	MODERN SPECIES	1	Parvg (ENSCGRG00001020780) #7	Parvb (ENSCGRG00001020564) #8	ENSCGRG00001020966 #9	Samm50 (ENSCGRG00001020546) #10	Pnpla3 (ENSCGRG00001023026) #11	Pnpla5 (ENSCGRG00001003411) #12	Sult4a1 (ENSCGRG00001022132) #13	Efcab6 (ENSCGRG00001023590) #14	Mpped1 (ENSCGRG00001023154) #15	Scube1 (ENSCGRG00001022393) #16	Ttll12 (ENSCGRG00001020693) #17	Tspo (ENSCGRG00001020463) #18	Mcat (ENSCGRG00001021409) #19	Bik (ENSCGRG00001021137) #20	Ttll1 (ENSCGRG00001020591) #21	Pacsin2 (ENSCGRG00001020366) #22	Arfgap3 (ENSCGRG00001022527) #23	A4galt (ENSCGRG00001010449) #24	Cyb5r3 (ENSCGRG00001002853) #25	ENSCGRG00001004211 #26	ENSCGRG00001021873 #27	Serhl (ENSCGRG00001021008) #28	Nfam1 (ENSCGRG00001021390) #29	ENSCGRG00001021131 #30	ENSCGRG00001020758 #31	ENSCGRG00001020509 #32	ENSCGRG00001020807 #33	ENSCGRG00001020612 #34	Cyp2d22 (ENSCGRG00001021750) #35	Ndufa6 (ENSCGRG00001021387) #36	Smdt1 (ENSCGRG00001008476) #37
Golden Hamster	MODERN SPECIES	626	Shisal1 (ENSMAUG00000020671)	Parvg (ENSMAUG00000022195) #7	Parvb (ENSMAUG00000018794) #8	Samm50 (ENSMAUG00000019203) #10	Pnpla3 (ENSMAUG00000004304) #11	Pnpla5 (ENSMAUG00000017738) #12	Sult4a1 (ENSMAUG00000020511) #13	Efcab6 (ENSMAUG00000016708) #14	Mpped1 (ENSMAUG00000015435) #15	ENSMAUG00000014861 #16	ENSMAUG00000020344	Tspo (ENSMAUG00000022011) #18	Mcat (ENSMAUG00000001870) #19	Bik (ENSMAUG00000019844) #20	Ttll1 (ENSMAUG00000006755) #21	Pacsin2 (ENSMAUG00000018738) #22	Arfgap3 (ENSMAUG00000017439) #23	A4galt (ENSMAUG00000020066) #24	Cyb5r3 (ENSMAUG00000018937) #25	Poldip3 (ENSMAUG00000014002) #26	ENSMAUG00000019905 #27	Nfam1 (ENSMAUG00000021430) #29	ENSMAUG00000016173 #30	Smdt1 (ENSMAUG00000013006) #37	Pheta2 (ENSMAUG00000012084)	ENSMAUG00000021300	Wbp2nl (ENSMAUG00000021409)	ENSMAUG00000014933	Smim45 (ENSMAUG00000010423)	Cenpm (ENSMAUG00000013641)	Tnfrsf13c (ENSMAUG00000021132)
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896.h #30	ENSGT00940000153331.y.b.b #31	ENSGT00940000153331.y.b.a.a ##31	ENSGT00940000153331.y.b.a.b #34	ENSGT00940000153331.y.a #35	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686
Prairie vole	MODERN SPECIES	2	Shisal1 (ENSMOCG00000001832)	Parvg (ENSMOCG00000018338) #7	Parvb (ENSMOCG00000022443) #8	Samm50 (ENSMOCG00000009596) #10	Pnpla3 (ENSMOCG00000020770) #11	Pnpla5 (ENSMOCG00000012819) #12	Sult4a1 (ENSMOCG00000021180) #13	Efcab6 (ENSMOCG00000003964) #14	Mpped1 (ENSMOCG00000018115) #15	Scube1 (ENSMOCG00000002809) #16	Ttll12 (ENSMOCG00000013400) #17	Tspo (ENSMOCG00000000457) #18	Mcat (ENSMOCG00000001331) #19	Bik (ENSMOCG00000001896) #20	Ttll1 (ENSMOCG00000009806) #21	Pacsin2 (ENSMOCG00000013530) #22	Arfgap3 (ENSMOCG00000017076) #23	A4galt (ENSMOCG00000001881) #24	Cyb5r3 (ENSMOCG00000007336) #25	Poldip3 (ENSMOCG00000014101) #26	Nfam1 (ENSMOCG00000015515) #29	ENSMOCG00000019326 #30	ENSMOCG00000001543 #31	ENSMOCG00000003545 #31	Cyp2d40 (ENSMOCG00000019528) ##31	ENSMOCG00000015222 #31	ENSMOCG00000011450 #34	Cyp2d22 (ENSMOCG00000012735) #35	Ndufa6 (ENSMOCG00000014629) #36	Smdt1 (ENSMOCG00000017726) #37	Pheta2 (ENSMOCG00000006143)
Northern American deer mouse	MODERN SPECIES	12	Samm50 (ENSPEMG00000021164) #10	Pnpla3 (ENSPEMG00000021087) #11	Pnpla5 (ENSPEMG00000020991) #12	ENSPEMG00000022556 #13	Efcab6 (ENSPEMG00000021803) #14	Mpped1 (ENSPEMG00000021045) #15	ENSPEMG00000020858	Scube1 (ENSPEMG00000012750) #16	Ttll12 (ENSPEMG00000021052) #17	Tspo (ENSPEMG00000020791) #18	Mcat (ENSPEMG00000020839) #19	ENSPEMG00000020645 #20	ENSPEMG00000028833 #20	ENSPEMG00000027753	Ttll1 (ENSPEMG00000021844) #21	Pacsin2 (ENSPEMG00000008083) #22	Arfgap3 (ENSPEMG00000021159) #23	A4galt (ENSPEMG00000021237) #24	Cyb5r3 (ENSPEMG00000020740) #25	Poldip3 (ENSPEMG00000021065) #26	Rrp7a (ENSPEMG00000022265) #27	Serhl (ENSPEMG00000030338) #28	Nfam1 (ENSPEMG00000021252) #29	ENSPEMG00000020573 #30	ENSPEMG00000029535 #31	ENSPEMG00000029803 #31	ENSPEMG00000027063 #31	ENSPEMG00000029885 ##31	ENSPEMG00000029293 ##31	ENSPEMG00000030889 ##31	ENSPEMG00000030236 ##31
Murinae	ANCESTRAL SPECIES	10	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896 #30	ENSGT00940000153331.y.b.a.a ##31	ENSGT00940000153331.y.b.b #31	ENSGT00940000153331.y.b.a.b #34	ENSGT00940000153331.y.a #35	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686
Mus	ANCESTRAL SPECIES	11	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896.e #30	ENSGT00940000153331.y.b.a.a.a.a ##31	ENSGT00940000153331.y.b.a.b.b #34	ENSGT00940000153331.y.b.b #31	ENSGT00940000153331.z ##31	ENSGT00940000153331.y.a #35	ENSGT00940000153331.y.b.a.b.a.b #34	ENSGT00940000153331.y.b.a.b.a.a #34
Mus_A	ANCESTRAL SPECIES	13	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896.e #30	ENSGT00940000153331.y.b.a.a.a.a ##31	ENSGT00940000153331.y.b.a.b.b #34	ENSGT00940000153331.y.b.b #31	ENSGT00940000153331.z ##31	ENSGT00940000153331.y.b.a.b.a.b #34	ENSGT00940000153331.y.b.a.b.a.a.b #34	ENSGT00940000153331.y.b.a.b.a.a.a #34
Ryukyu mouse	MODERN SPECIES	6	Shisal1 (MGP_CAROLIEiJ_G0020113)	Parvg (MGP_CAROLIEiJ_G0020112) #7	Parvb (MGP_CAROLIEiJ_G0020111) #8	Samm50 (MGP_CAROLIEiJ_G0020110) #10	Pnpla3 (MGP_CAROLIEiJ_G0020109) #11	Pnpla5 (MGP_CAROLIEiJ_G0020108) #12	Sult4a1 (MGP_CAROLIEiJ_G0020107) #13	Efcab6 (MGP_CAROLIEiJ_G0020106) #14	Mpped1 (MGP_CAROLIEiJ_G0020105) #15	Scube1 (MGP_CAROLIEiJ_G0020104) #16	Ttll12 (MGP_CAROLIEiJ_G0020103) #17	Tspo (MGP_CAROLIEiJ_G0020102) #18	Mcat (MGP_CAROLIEiJ_G0020101) #19	MGP_CAROLIEiJ_G0020100 #20	Ttll1 (MGP_CAROLIEiJ_G0020099) #21	Pacsin2 (MGP_CAROLIEiJ_G0020098) #22	MGP_CAROLIEiJ_G0020097	Arfgap3 (MGP_CAROLIEiJ_G0020096) #23	A4galt (MGP_CAROLIEiJ_G0020095) #24	MGP_CAROLIEiJ_G0020094 #25	Poldip3 (MGP_CAROLIEiJ_G0020093) #26	Rrp7a (MGP_CAROLIEiJ_G0020092) #27	Serhl (MGP_CAROLIEiJ_G0020091) #28	Nfam1 (MGP_CAROLIEiJ_G0020090) #29	Tcf20 (MGP_CAROLIEiJ_G0020089) #30	MGP_CAROLIEiJ_G0020088 #31	MGP_CAROLIEiJ_G0020087 ##31	MGP_CAROLIEiJ_G0020086 #34	Cyp2d11 (MGP_CAROLIEiJ_G0020085) #34	Cyp2d22 (MGP_CAROLIEiJ_G0020084) #35	Ndufa6 (MGP_CAROLIEiJ_G0020083) #36
Mus_B	ANCESTRAL SPECIES	12	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896.e #30	ENSGT00940000153331.y.b.a.a.a.a ##31	ENSGT00940000153331.y.b.a.b.b #34	ENSGT00940000153331.y.b.b #31	ENSGT00940000153331.z ##31	ENSGT00940000153331.y.b.a.b.a.b.a #34	ENSGT00940000153331.y.b.a.b.a.a.b.a.b #34	ENSGT00940000153331.y.b.a.b.a.a.a #34
Mouse	MODERN SPECIES	6	Shisal1 (ENSMUSG00000062760)	Parvg (ENSMUSG00000022439) #7	Parvb (ENSMUSG00000022438) #8	Samm50 (ENSMUSG00000022437) #10	Pnpla3 (ENSMUSG00000041653) #11	Pnpla5 (ENSMUSG00000018868) #12	Sult4a1 (ENSMUSG00000018865) #13	Efcab6 (ENSMUSG00000022441) #14	Mpped1 (ENSMUSG00000041708) #15	Scube1 (ENSMUSG00000016763) #16	Ttll12 (ENSMUSG00000016757) #17	Tspo (ENSMUSG00000041736) #18	Mcat (ENSMUSG00000048755) #19	Bik (ENSMUSG00000016758) #20	Ttll1 (ENSMUSG00000022442) #21	Pacsin2 (ENSMUSG00000016664) #22	Arfgap3 (ENSMUSG00000054277) #23	A4galt (ENSMUSG00000047878) #24	Cyb5r3 (ENSMUSG00000018042) #25	Poldip3 (ENSMUSG00000041815) #26	Rrp7a (ENSMUSG00000018040) #27	Serhl (ENSMUSG00000058586) #28	Nfam1 (ENSMUSG00000058099) #29	Tcf20 (ENSMUSG00000041852) #30	Cyp2d26 (ENSMUSG00000022445) #31	Cyp2d40 (ENSMUSG00000068083) ##31	Cyp2d13 (ENSMUSG00000118516) #34	Cyp2d34 (ENSMUSG00000094559) #34	Cyp2d12 (ENSMUSG00000096852) #34	Cyp2d9 (ENSMUSG00000068086) #34	Cyp2d10 (ENSMUSG00000094806) #34
Mus_C	ANCESTRAL SPECIES	17	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896.e #30	ENSGT00940000153331.y.b.a.a.a.a ##31	ENSGT00940000153331.y.b.b #31	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686	ENSGT00390000008751.a	ENSGT00530000063718.a.b
spretus	MODERN SPECIES	6	Shisal1 (MGP_SPRETEiJ_G0021010)	Parvg (MGP_SPRETEiJ_G0021009) #7	Parvb (MGP_SPRETEiJ_G0021008) #8	Samm50 (MGP_SPRETEiJ_G0021007) #10	Pnpla3 (MGP_SPRETEiJ_G0021006) #11	Pnpla5 (MGP_SPRETEiJ_G0021005) #12	Sult4a1 (MGP_SPRETEiJ_G0021004) #13	Efcab6 (MGP_SPRETEiJ_G0021003) #14	Mpped1 (MGP_SPRETEiJ_G0021002) #15	Scube1 (MGP_SPRETEiJ_G0021001) #16	Ttll12 (MGP_SPRETEiJ_G0021000) #17	Tspo (MGP_SPRETEiJ_G0020999) #18	Mcat (MGP_SPRETEiJ_G0020998) #19	Bik (MGP_SPRETEiJ_G0020997) #20	Ttll1 (MGP_SPRETEiJ_G0020996) #21	Pacsin2 (MGP_SPRETEiJ_G0020995) #22	Arfgap3 (MGP_SPRETEiJ_G0020994) #23	A4galt (MGP_SPRETEiJ_G0020993) #24	Cyb5r3 (MGP_SPRETEiJ_G0020992) #25	Poldip3 (MGP_SPRETEiJ_G0020991) #26	Rrp7a (MGP_SPRETEiJ_G0020990) #27	Serhl (MGP_SPRETEiJ_G0020989) #28	Nfam1 (MGP_SPRETEiJ_G0020988) #29	Tcf20 (MGP_SPRETEiJ_G0020987) #30	MGP_SPRETEiJ_G0020986 #34	Cyp2d26 (MGP_SPRETEiJ_G0020985) #31	Cyp2d22 (MGP_SPRETEiJ_G0020984) #35	Ndufa6 (MGP_SPRETEiJ_G0020983) #36	Smdt1 (MGP_SPRETEiJ_G0020982) #37	Pheta2 (MGP_SPRETEiJ_G0020981)	Naga (MGP_SPRETEiJ_G0020980)
Steppe mouse	MODERN SPECIES	3375	Shisal1 (ENSMSIG00000018310)	Parvg (ENSMSIG00000018240) #7	Parvb (ENSMSIG00000018208) #8	Samm50 (ENSMSIG00000018181) #10	Pnpla3 (ENSMSIG00000018162) #11	Pnpla5 (ENSMSIG00000018110) #12	Sult4a1 (ENSMSIG00000018043) #13	Efcab6 (ENSMSIG00000017906) #14	Mpped1 (ENSMSIG00000017870) #15	Scube1 (ENSMSIG00000017647) #16	Ttll12 (ENSMSIG00000017603) #17	Tspo (ENSMSIG00000017574) #18	Mcat (ENSMSIG00000017549) #19	Bik (ENSMSIG00000017503) #20	Ttll1 (ENSMSIG00000017485) #21	Pacsin2 (ENSMSIG00000017290) #22	Arfgap3 (ENSMSIG00000017189) #23	A4galt (ENSMSIG00000017180) #24	Cyb5r3 (ENSMSIG00000017092) #25	Poldip3 (ENSMSIG00000017028) #26	Rrp7a (ENSMSIG00000017010) #27	Serhl (ENSMSIG00000016951) #28	Nfam1 (ENSMSIG00000016901) #29	Tcf20 (ENSMSIG00000016858) #30	Cyp2d40 (ENSMSIG00000016818) ##31	Cyp2d26 (ENSMSIG00000016753) #31	ENSMSIG00000016748 ##31	Cyp2d9 (ENSMSIG00000016551) #34
Shrew mouse	MODERN SPECIES	8	Shisal1 (MGP_PahariEiJ_G0020119)	Parvg (MGP_PahariEiJ_G0020118) #7	Parvb (MGP_PahariEiJ_G0020117) #8	Samm50 (MGP_PahariEiJ_G0020116) #10	Pnpla3 (MGP_PahariEiJ_G0020115) #11	Pnpla5 (MGP_PahariEiJ_G0020114) #12	Sult4a1 (MGP_PahariEiJ_G0020113) #13	Efcab6 (MGP_PahariEiJ_G0020112) #14	Mpped1 (MGP_PahariEiJ_G0020111) #15	Scube1 (MGP_PahariEiJ_G0020110) #16	Ttll12 (MGP_PahariEiJ_G0020109) #17	Tspo (MGP_PahariEiJ_G0020108) #18	Mcat (MGP_PahariEiJ_G0020107) #19	Bik (MGP_PahariEiJ_G0020106) #20	Ttll1 (MGP_PahariEiJ_G0020105) #21	Pacsin2 (MGP_PahariEiJ_G0020104) #22	Arfgap3 (MGP_PahariEiJ_G0020103) #23	A4galt (MGP_PahariEiJ_G0020102) #24	Cyb5r3 (MGP_PahariEiJ_G0020101) #25	Poldip3 (MGP_PahariEiJ_G0020100) #26	Rrp7a (MGP_PahariEiJ_G0020099) #27	Serhl (MGP_PahariEiJ_G0020098) #28	Nfam1 (MGP_PahariEiJ_G0020097) #29	Tcf20 (MGP_PahariEiJ_G0020096) #30	Cyp2d26 (MGP_PahariEiJ_G0020095) #31	MGP_PahariEiJ_G0020094 ##31	MGP_PahariEiJ_G0020093 ##31	MGP_PahariEiJ_G0020092 ##31	MGP_PahariEiJ_G0020091 ##31	MGP_PahariEiJ_G0020090 #34	MGP_PahariEiJ_G0020089 #34
Rat	MODERN SPECIES	17	Shisal1 (ENSRNOG00000052725)	Parvg (ENSRNOG00000052064) #7	Parvb (ENSRNOG00000055305) #8	Samm50 (ENSRNOG00000011952) #10	Pnpla3 (ENSRNOG00000022268) #11	Pnpla5 (ENSRNOG00000022296) #12	Sult4a1 (ENSRNOG00000046975) #13	Efcab6 (ENSRNOG00000011094) #14	Mpped1 (ENSRNOG00000010834) #15	Scube1 (ENSRNOG00000010617) #16	Ttll12 (ENSRNOG00000022623) #17	Tspo (ENSRNOG00000010549) #18	Mcat (ENSRNOG00000010539) #19	Bik (ENSRNOG00000010359) #20	Ttll1 (ENSRNOG00000010141) #21	Pacsin2 (ENSRNOG00000009756) #22	Arfgap3 (ENSRNOG00000046472) #23	A4galt (ENSRNOG00000009736) #24	AABR07058366.1 (ENSRNOG00000025046)	Cyb5r3 (ENSRNOG00000009592) #25	Poldip3 (ENSRNOG00000022877) #26	Rrp7a (ENSRNOG00000022896) #27	Serhl2 (ENSRNOG00000022932) #28	Nfam1 (ENSRNOG00000022975) #29	Tcf20 (ENSRNOG00000009585) #30	Cyp2d2 (ENSRNOG00000008988) #31	Cyp2d3 (ENSRNOG00000029179) #34	Cyp2d5 (ENSRNOG00000029128) #34	Cyp2d4 (ENSRNOG00000032261) #35	Ndufa6 (ENSRNOG00000008569) #36	Smdt1 (ENSRNOG00000070907) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1277	Rtl6 (ENSNGAG00000015474)	Shisal1 (ENSNGAG00000019729)	Parvg (ENSNGAG00000000831) #7	ENSNGAG00000000427 #8	Samm50 (ENSNGAG00000018315) #10	Pnpla3 (ENSNGAG00000016346) #11	Sult4a1 (ENSNGAG00000018152) #13	ENSNGAG00000006827	Mpped1 (ENSNGAG00000011686) #15	ENSNGAG00000000494 #16	Ttll12 (ENSNGAG00000020285) #17	Tspo (ENSNGAG00000017715) #18	Mcat (ENSNGAG00000019327) #19	Bik (ENSNGAG00000000452) #20	Ttll1 (ENSNGAG00000012516) #21	Pacsin2 (ENSNGAG00000011688) #22	Arfgap3 (ENSNGAG00000014403) #23	A4galt (ENSNGAG00000017374) #24	Cyb5r3 (ENSNGAG00000010471) #25	Poldip3 (ENSNGAG00000000210) #26	Rrp7a (ENSNGAG00000010039) #27	Serhl (ENSNGAG00000000560) #28	ENSNGAG00000010915 #29	ENSNGAG00000017213 #30	Cyp2d26 (ENSNGAG00000019264) #31	ENSNGAG00000019982 ##31	ENSNGAG00000012213 ##31	ENSNGAG00000000143 ##31	ENSNGAG00000015048 ##31	ENSNGAG00000000577 ##31	Cyp2d22 (ENSNGAG00000020195) #35
Lesser Egyptian jerboa	MODERN SPECIES	42	Parvg (ENSJJAG00000019773) #7	Parvb (ENSJJAG00000008521) #8	Samm50 (ENSJJAG00000023006) #10	Pnpla3 (ENSJJAG00000020833) #11	Pnpla5 (ENSJJAG00000018734) #12	Sult4a1 (ENSJJAG00000019977) #13	Efcab6 (ENSJJAG00000003593) #14	Mpped1 (ENSJJAG00000021690) #15	Scube1 (ENSJJAG00000004523) #16	Ttll12 (ENSJJAG00000016923) #17	Tspo (ENSJJAG00000021263) #18	Mcat (ENSJJAG00000020943) #19	Bik (ENSJJAG00000017292) #20	Ttll1 (ENSJJAG00000003375) #21	ENSJJAG00000018057	Pacsin2 (ENSJJAG00000022165) #22	Arfgap3 (ENSJJAG00000011502) #23	A4galt (ENSJJAG00000020299) #24	Cyb5r3 (ENSJJAG00000022835) #25	Poldip3 (ENSJJAG00000018034) #26	Rrp7a (ENSJJAG00000019486) #27	Serhl (ENSJJAG00000019158) #28	ENSJJAG00000017824 #29	ENSJJAG00000019261 #30	ENSJJAG00000017515 #31	Cyp2d22 (ENSJJAG00000021489) #35	Ndufa6 (ENSJJAG00000020053) #36	Smdt1 (ENSJJAG00000017571) #37	Pheta2 (ENSJJAG00000005475)	Naga (ENSJJAG00000021575)	ENSJJAG00000019913
Kangaroo rat	MODERN SPECIES	398													Mcat (ENSDORG00000012225) #19	Bik (ENSDORG00000012228) #20	Ttll1 (ENSDORG00000004194) #21	Pacsin2 (ENSDORG00000004122) #22	ENSDORG00000027695 #23	A4galt (ENSDORG00000015599) #24	Poldip3 (ENSDORG00000006590) #26	Rrp7a (ENSDORG00000016138) #27	ENSDORG00000026270 #30	ENSDORG00000028779 #31	ENSDORG00000006508 #31	ENSDORG00000002430 #31	ENSDORG00000001647 #31	Ndufa6 (ENSDORG00000008733) #36	Smdt1 (ENSDORG00000008734) #37	Pheta2 (ENSDORG00000024472)	Naga (ENSDORG00000008736)	Wbp2nl (ENSDORG00000026174)	ENSDORG00000014056
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896 #30	ENSGT00940000153331 #31	ENSGT00500000045764	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686	ENSGT00390000008751.a	ENSGT00530000063718.a.b
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00960000188846	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896 #30	ENSGT00940000153331 #31	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686	ENSGT00390000008751.a	ENSGT00530000063718.a.b	ENSGT00940000158004
Marmotini	ANCESTRAL SPECIES	4	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00960000188846	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00390000000787 #29	ENSGT00940000157896 #30	ENSGT00940000153331.u.b #31	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686	ENSGT00390000008751.a	ENSGT00530000063718.a.b	ENSGT00940000158004
Marmotini_b	ANCESTRAL SPECIES	60	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00960000188846	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00530000063960 #28	ENSGT00940000157896 #30	ENSGT00940000153331.u.b #31	ENSGT00940000153331.u.a #31	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686	ENSGT00390000008751.a
Arctic ground squirrel	MODERN SPECIES	136	SHISAL1 (ENSUPAG00010001734)	PARVG (ENSUPAG00010001757) #7	PARVB (ENSUPAG00010001809) #8	SAMM50 (ENSUPAG00010001870) #10	PNPLA3 (ENSUPAG00010001903) #11	PNPLA5 (ENSUPAG00010001928) #12	SULT4A1 (ENSUPAG00010001963) #13	EFCAB6 (ENSUPAG00010002017) #14	MPPED1 (ENSUPAG00010002082) #15	SCUBE1 (ENSUPAG00010002113) #16	TTLL12 (ENSUPAG00010002356) #17	TSPO (ENSUPAG00010002375) #18	MCAT (ENSUPAG00010002384) #19	ENSUPAG00010002398	TTLL1 (ENSUPAG00010002417) #21	PACSIN2 (ENSUPAG00010002434) #22	ARFGAP3 (ENSUPAG00010002503) #23	A4GALT (ENSUPAG00010002535) #24	CYB5R3 (ENSUPAG00010002538) #25	POLDIP3 (ENSUPAG00010002551) #26	RRP7A (ENSUPAG00010002574) #27	SERHL2 (ENSUPAG00010002586) #28	TCF20 (ENSUPAG00010002621) #30
Squirrel	MODERN SPECIES	318	RTL6 (ENSSTOG00000005224)	SHISAL1 (ENSSTOG00000029147)	PARVB (ENSSTOG00000027879) #8	SAMM50 (ENSSTOG00000013891) #10	PNPLA3 (ENSSTOG00000014059) #11	PNPLA5 (ENSSTOG00000019885) #12	SULT4A1 (ENSSTOG00000023129) #13	EFCAB6 (ENSSTOG00000004012) #14	MPPED1 (ENSSTOG00000027935) #15	SCUBE1 (ENSSTOG00000002898) #16	TTLL12 (ENSSTOG00000002879) #17	TSPO (ENSSTOG00000002875) #18	MCAT (ENSSTOG00000001359) #19	ENSSTOG00000000060	TTLL1 (ENSSTOG00000026789) #21	PACSIN2 (ENSSTOG00000004795) #22	ARFGAP3 (ENSSTOG00000020407) #23	ENSSTOG00000023571 #24	CYB5R3 (ENSSTOG00000025231) #25	POLDIP3 (ENSSTOG00000008230) #26	RRP7A (ENSSTOG00000003111) #27	ENSSTOG00000022403 #28	TCF20 (ENSSTOG00000025883) #30	ENSSTOG00000031756 #31	ENSSTOG00000020124 #31	NDUFA6 (ENSSTOG00000015696) #36	SMDT1 (ENSSTOG00000015700) #37	NAGA (ENSSTOG00000023109)
Alpin marmot	MODERN SPECIES	76	PRR5 (ENSMMMG00000022969)	RTL6 (ENSMMMG00000023111)	PARVG (ENSMMMG00000023115) #7	SAMM50 (ENSMMMG00000002215) #10	PNPLA3 (ENSMMMG00000002236) #11	PNPLA5 (ENSMMMG00000002336) #12	SULT4A1 (ENSMMMG00000002358) #13	EFCAB6 (ENSMMMG00000002371) #14	MPPED1 (ENSMMMG00000002444) #15	SCUBE1 (ENSMMMG00000002455) #16	TTLL12 (ENSMMMG00000002675) #17	TSPO (ENSMMMG00000002740) #18	ENSMMMG00000002745 #19	ENSMMMG00000002773	TTLL1 (ENSMMMG00000002791) #21	PACSIN2 (ENSMMMG00000002833) #22	ARFGAP3 (ENSMMMG00000002860) #23	A4GALT (ENSMMMG00000002992) #24	CYB5R3 (ENSMMMG00000002994) #25	POLDIP3 (ENSMMMG00000003008) #26	RRP7A (ENSMMMG00000003038) #27	SERHL2 (ENSMMMG00000003053) #28	NFAM1 (ENSMMMG00000003088) #29	TCF20 (ENSMMMG00000003101) #30	ENSMMMG00000003138 #31	NDUFA6 (ENSMMMG00000003211) #36	SMDT1 (ENSMMMG00000003226) #37	NAGA (ENSMMMG00000003269)	ENSMMMG00000003326	ENSMMMG00000003339	SMIM45 (ENSMMMG00000003396)
Eurasian red squirrel	MODERN SPECIES	14	PARVG (ENSSVLG00005005192) #7	PARVB (ENSSVLG00005005116) #8	SAMM50 (ENSSVLG00005005065) #10	PNPLA3 (ENSSVLG00005005043) #11	PNPLA5 (ENSSVLG00005004974) #12	SULT4A1 (ENSSVLG00005004928) #13	EFCAB6 (ENSSVLG00005004762) #14	MPPED1 (ENSSVLG00005004708) #15	SCUBE1 (ENSSVLG00005004646) #16	TTLL12 (ENSSVLG00005004617) #17	TSPO (ENSSVLG00005004596) #18	MCAT (ENSSVLG00005004575) #19	ENSSVLG00005004560	ENSSVLG00005004532 #20	TTLL1 (ENSSVLG00005004510) #21	PACSIN2 (ENSSVLG00005004476) #22	ARFGAP3 (ENSSVLG00005004430) #23	A4GALT (ENSSVLG00005004406) #24	ENSSVLG00005004382 #25	POLDIP3 (ENSSVLG00005004309) #26	RRP7A (ENSSVLG00005004268) #27	SERHL2 (ENSSVLG00005004215) #28	NFAM1 (ENSSVLG00005004168) #29	TCF20 (ENSSVLG00005004152) #30	ENSSVLG00005003890 #31	ENSSVLG00005003721	ENSSVLG00005003686 #31	NDUFA6 (ENSSVLG00005003661) #36	SMDT1 (ENSSVLG00005003647) #37	PHETA2 (ENSSVLG00005003635)	NAGA (ENSSVLG00005003614)
Hystricomorpha	ANCESTRAL SPECIES	13	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00390000000787 #29	ENSGT00940000157896 #30	ENSGT00940000153331.q.b #31	ENSGT00940000153331.q.a.a.a #31	ENSGT00940000153331.q.a.a.b #31	ENSGT00940000153331.q.a.b #31	ENSGT00940000153331.r #31	ENSGT00500000045764	ENSGT00390000018898 #36	ENSGT00390000017489 #37
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00390000000787 #29	ENSGT00940000157896 #30	ENSGT00940000153331.q.b #31	ENSGT00940000153331.q.a.a.a #31	ENSGT00940000153331.q.a.a.b #31	ENSGT00940000153331.q.a.b #31	ENSGT00940000153331.r #31	ENSGT00500000045764	ENSGT00390000018898 #36	ENSGT00390000017489 #37
Guinea pig	MODERN SPECIES	28	SHISAL1 (ENSCPOG00000037356)	PARVG (ENSCPOG00000022528) #7	PARVB (ENSCPOG00000019700) #8	SAMM50 (ENSCPOG00000005200) #10	PNPLA3 (ENSCPOG00000020336) #11	PNPLA5 (ENSCPOG00000008894) #12	SULT4A1 (ENSCPOG00000012199) #13	EFCAB6 (ENSCPOG00000004320) #14	MPPED1 (ENSCPOG00000002983) #15	SCUBE1 (ENSCPOG00000026406) #16	TTLL12 (ENSCPOG00000002155) #17	TSPO (ENSCPOG00000031571) #18	MCAT (ENSCPOG00000026399) #19	ENSCPOG00000022451 #20	TTLL1 (ENSCPOG00000002675) #21	PACSIN2 (ENSCPOG00000001359) #22	ARFGAP3 (ENSCPOG00000021017) #23	A4GALT (ENSCPOG00000001858) #24	CYB5R3 (ENSCPOG00000020349) #25	POLDIP3 (ENSCPOG00000019524) #26	RRP7A (ENSCPOG00000030547) #27	ENSCPOG00000014975	NFAM1 (ENSCPOG00000019664) #29	TCF20 (ENSCPOG00000024611) #30	ENSCPOG00000031413 #31	ENSCPOG00000034989 #31	ENSCPOG00000036957 #31	ENSCPOG00000035390 #31	ENSCPOG00000035752 #31	ENSCPOG00000033260 #31	ENSCPOG00000039514 #31
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00390000006791	ENSGT00950000183194.b #7	ENSGT00950000183194.a.a #8	ENSGT00390000011355 #10	ENSGT00940000155662 #11	ENSGT00940000162116 #12	ENSGT00940000158662 #13	ENSGT00390000013629 #14	ENSGT00390000007681.b.a.b #15	ENSGT00940000153185.a.a.a #16	ENSGT00390000006760 #17	ENSGT00390000012980.a #18	ENSGT00390000013715 #19	ENSGT00530000064453 #20	ENSGT00940000156720 #21	ENSGT00950000182973.a.c.b #22	ENSGT00940000158466 #23	ENSGT00510000047981.c #24	ENSGT00940000153962.b #25	ENSGT00390000018868.A #26	ENSGT00390000018482 #27	ENSGT00390000000787 #29	ENSGT00940000157896 #30	ENSGT00940000153331.q.b #31	ENSGT00940000153331.q.a.b #31	ENSGT00940000153331.q.a.a.b #31	ENSGT00940000153331.r #31	ENSGT00500000045764	ENSGT00390000018898 #36	ENSGT00390000017489 #37	ENSGT00940000162686
Long-tailed chinchilla	MODERN SPECIES	120	RTL6 (ENSCLAG00000018095)	SHISAL1 (ENSCLAG00000017217)	PARVG (ENSCLAG00000017133) #7	PARVB (ENSCLAG00000017228) #8	SAMM50 (ENSCLAG00000017226) #10	PNPLA3 (ENSCLAG00000016788) #11	PNPLA5 (ENSCLAG00000016574) #12	SULT4A1 (ENSCLAG00000017221) #13	EFCAB6 (ENSCLAG00000016383) #14	MPPED1 (ENSCLAG00000016822) #15	SCUBE1 (ENSCLAG00000016931) #16	TTLL12 (ENSCLAG00000017211) #17	TSPO (ENSCLAG00000016768) #18	MCAT (ENSCLAG00000017236) #19	TTLL1 (ENSCLAG00000017162) #21	PACSIN2 (ENSCLAG00000016516) #22	ARFGAP3 (ENSCLAG00000016273) #23	A4GALT (ENSCLAG00000018104) #24	CYB5R3 (ENSCLAG00000015151) #25	POLDIP3 (ENSCLAG00000016864) #26	RRP7A (ENSCLAG00000016715) #27	NFAM1 (ENSCLAG00000016829) #29	TCF20 (ENSCLAG00000016780) #30	ENSCLAG00000017192 #31	ENSCLAG00000016575 #31	ENSCLAG00000017186 #31	ENSCLAG00000017000	NDUFA6 (ENSCLAG00000016285) #36	SMDT1 (ENSCLAG00000016250) #37	PHETA2 (ENSCLAG00000017176)	NAGA (ENSCLAG00000017177)
Degu	MODERN SPECIES	194	SHISAL1 (ENSODEG00000015668)	PARVG (ENSODEG00000014889) #7	PARVB (ENSODEG00000014657) #8	SAMM50 (ENSODEG00000014631) #10	PNPLA3 (ENSODEG00000014968) #11	PNPLA5 (ENSODEG00000015510) #12	SULT4A1 (ENSODEG00000014672) #13	EFCAB6 (ENSODEG00000014555) #14	MPPED1 (ENSODEG00000016392) #15	ENSODEG00000014829 #16	TTLL12 (ENSODEG00000015110) #17	TSPO (ENSODEG00000015371) #18	MCAT (ENSODEG00000014684) #19	ENSODEG00000015823 #20	TTLL1 (ENSODEG00000015690) #21	PACSIN2 (ENSODEG00000013973) #22	ENSODEG00000014382	ARFGAP3 (ENSODEG00000014423) #23	A4GALT (ENSODEG00000014971) #24	ENSODEG00000020211	CYB5R3 (ENSODEG00000014899) #25	POLDIP3 (ENSODEG00000014224) #26	RRP7A (ENSODEG00000015126) #27	ENSODEG00000014415 #30	ENSODEG00000014147 #31	ENSODEG00000014495 #31	ENSODEG00000015120 #31
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000018749 #10	ENSHGLG00000043827	PNPLA5 (ENSHGLG00000005141) #12	SULT4A1 (ENSHGLG00000005968) #13	ENSHGLG00000008695	ENSHGLG00000037061	ENSHGLG00000036603	ENSHGLG00000005238 #14	MPPED1 (ENSHGLG00000005407) #15	SCUBE1 (ENSHGLG00000008233) #16	TTLL12 (ENSHGLG00000005068) #17	TSPO (ENSHGLG00000046511) #18	MCAT (ENSHGLG00000050791) #19	ENSHGLG00000008535 #20	TTLL1 (ENSHGLG00000038614) #21	PACSIN2 (ENSHGLG00000015562) #22	ARFGAP3 (ENSHGLG00000018359) #23	A4GALT (ENSHGLG00000048655) #24	CYB5R3 (ENSHGLG00000016147) #25	POLDIP3 (ENSHGLG00000013156) #26	ENSHGLG00000015706 #27	ENSHGLG00000039538	NFAM1 (ENSHGLG00000041183) #29	TCF20 (ENSHGLG00000009579) #30	ENSHGLG00000010614 #31	ENSHGLG00000019048 #31	ENSHGLG00000018202 #31	ENSHGLG00000017416 #31	ENSHGLG00000004933 #31	ENSHGLG00000047435	NDUFA6 (ENSHGLG00000040424) #36