Acanthomorphata	ANCESTRAL SPECIES	5	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT01010000223530.a	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00740000117080	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00970000197261	ENSGT00940000170370	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35
Euacanthomorphacea	ANCESTRAL SPECIES	15	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT01010000223530.a	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00740000117080	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37
Percomorphaceae	ANCESTRAL SPECIES	34	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00740000117080	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT01010000223530.a	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00740000117080	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37
Carangaria	ANCESTRAL SPECIES	12	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.b #36
Carangaria_A	ANCESTRAL SPECIES	11	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000161051.a.a.a.a.b #36	ENSGT00390000005911 #37
Seriola	ANCESTRAL SPECIES	6	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT01100000263521.b #15	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000161051.a.a.a.a.b #36	ENSGT00390000005911 #37
Greater amberjack	MODERN SPECIES	21	ihha (ENSSDUG00000015029) #7	snx4 (ENSSDUG00000015041) #8	ENSSDUG00000015061 #9	ENSSDUG00000015101 #10	ENSSDUG00000015372 #11	ENSSDUG00000015485 #12	ercc1 (ENSSDUG00000016794) #13	prmt2 (ENSSDUG00000016811) #14	ENSSDUG00000016828	ENSSDUG00000016836 #16	DIP2A (ENSSDUG00000016872) #17	ENSSDUG00000017128 #18	hycc2 (ENSSDUG00000017151) #19	trpm2 (ENSSDUG00000017210) #20	MAP3K13 (ENSSDUG00000017262) #21	PFKL (ENSSDUG00000017336) #22	TMEM169 (ENSSDUG00000017381) #23	xrcc5 (ENSSDUG00000017389) #24	COL6A2 (ENSSDUG00000017419) #25	MARCHF4 (ENSSDUG00000017455) #27	SMARCAL1 (ENSSDUG00000017470) #28	nme9 (ENSSDUG00000017498) #29	ENSSDUG00000017536	zgc:162707 (ENSSDUG00000017544) #30	ehhadh (ENSSDUG00000017550) #31	tmem41aa (ENSSDUG00000017558) #32	igf2bp2a (ENSSDUG00000017581) #33	tra2b (ENSSDUG00000017670) #34	ENSSDUG00000017678 #35	ENSSDUG00000017705 #36	ANKZF1 (ENSSDUG00000017724) #37
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	DUPLICATION
Yellowtail amberjack	MODERN SPECIES	413															ENSSLDG00000010837 #22	ENSSLDG00000010865 #22
Yellowtail amberjack	MODERN SPECIES	413																ENSSLDG00000010837 #22	ENSSLDG00000010865 #22
Yellowtail amberjack	MODERN SPECIES	414																ENSSLDG00000010892 #22
Yellowtail amberjack	MODERN SPECIES	3174	snx4 (ENSSLDG00000008791) #8	ENSSLDG00000008756 #9	ARSD (ENSSLDG00000008448) #10	ENSSLDG00000008351 #11	ENSSLDG00000006718 #12	ercc1 (ENSSLDG00000006393) #13	prmt2 (ENSSLDG00000006377) #14	ENSSLDG00000006359 #15	ENSSLDG00000006340 #16	DIP2A (ENSSLDG00000006259) #17	ENSSLDG00000006228 #18	hycc2 (ENSSLDG00000006118) #19	ENSSLDG00000006079 #20	trpm2 (ENSSLDG00000005925) #20	MAP3K13 (ENSSLDG00000005796) #21	ENSSLDG00000005750 #22
Yellowtail amberjack	MODERN SPECIES	2388																ENSSLDG00000007414 #22	TMEM169 (ENSSLDG00000007402) #23	xrcc5 (ENSSLDG00000007353) #24	ENSSLDG00000007329 #25	ENSSLDG00000007300 #26	MARCHF4 (ENSSLDG00000007291) #27	SMARCAL1 (ENSSLDG00000007224) #28	nme9 (ENSSLDG00000007187) #29	zgc:162707 (ENSSLDG00000007170) #30	ehhadh (ENSSLDG00000007146) #31	tmem41aa (ENSSLDG00000007119) #32	igf2bp2a (ENSSLDG00000007046) #33	tra2b (ENSSLDG00000007005) #34	ENSSLDG00000006947 #35	ENSSLDG00000006914 #36	ANKZF1 (ENSSLDG00000006877) #37
Barramundi perch	MODERN SPECIES	153	BIN1 (ENSLCAG00010020355)	ihha (ENSLCAG00010020398) #7	ARSD (ENSLCAG00010020404) #10	ENSLCAG00010020409 ##11	ENSLCAG00010020411 #11	ENSLCAG00010020418 #12	ercc1 (ENSLCAG00010020420) #13	prmt2 (ENSLCAG00010020424) #14	ENSLCAG00010020426	ENSLCAG00010020428 #16	DIP2A (ENSLCAG00010020909) #17	ENSLCAG00010022606 #18	hycc2 (ENSLCAG00010022612) #19	trpm2 (ENSLCAG00010022631) #20	MAP3K13 (ENSLCAG00010022673) #21	PFKL (ENSLCAG00010022730) #22	TMEM169 (ENSLCAG00010022961) #23	ENSLCAG00010022967	srpx (ENSLCAG00010022987)	SYTL5 (ENSLCAG00010022998)	DYNLT3 (ENSLCAG00010023004)	xk (ENSLCAG00010023008)	LANCL3 (ENSLCAG00010023013)	GRPR (ENSLCAG00010023018)	asb11 (ENSLCAG00010023024)	piga (ENSLCAG00010023038)	appb (ENSLCAG00010023089)	gabpa (ENSLCAG00010023176)	CBS (ENSLCAG00010023223)	sik1 (ENSLCAG00010023325)	ankrd10b (ENSLCAG00010023326)
Pleuronectoidei	ANCESTRAL SPECIES	9	ENSGT00950000182882.A.b.b.e	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT01100000263533.b.b.a.a.a.b.a	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37	ENSGT00950000182942.a.b
Tongue sole	MODERN SPECIES	7	trappc2 (ENSCSEG00000010105)	RAB9A (ENSCSEG00000010116)	ofd1 (ENSCSEG00000010129)	gpm6bb (ENSCSEG00000010160)	glra2 (ENSCSEG00000010196)	ercc1 (ENSCSEG00000010206) #13	prmt2 (ENSCSEG00000010235) #14	ENSCSEG00000010264	ENSCSEG00000010280 #16	DIP2A (ENSCSEG00000010300) #17	ENSCSEG00000010328 #18	hycc2 (ENSCSEG00000010372) #19	ENSCSEG00000010405 #20	ENSCSEG00000010429 #20	MAP3K13 (ENSCSEG00000010489) #21	pfkl (ENSCSEG00000010541) #22	TMEM169 (ENSCSEG00000010669) #23	xrcc5 (ENSCSEG00000010680) #24	COL6A2 (ENSCSEG00000010759) #25	MARCHF4 (ENSCSEG00000010778) #27	SMARCAL1 (ENSCSEG00000010785) #28	nme9 (ENSCSEG00000010797) #29	rpe (ENSCSEG00000010822)	ackr3a (ENSCSEG00000010829)	ENSCSEG00000010833	ENSCSEG00000010837	vangl1 (ENSCSEG00000010842)	casq2 (ENSCSEG00000010861)	ENSCSEG00000010876	SLC5A3 (ENSCSEG00000010879)	DOP1B (ENSCSEG00000010882)
Turbot	MODERN SPECIES	5	ENSSMAG00000009463	ENSSMAG00000009473	ihha (ENSSMAG00000036550) #7	ENSSMAG00000009633 #8	ENSSMAG00000009689 #10	ENSSMAG00000009712 #11	ENSSMAG00000009725 #12	ENSSMAG00000009766 #13	ENSSMAG00000009806 #16	ENSSMAG00000009841 #17	ENSSMAG00000028111	ENSSMAG00000010005 #18	ENSSMAG00000010020 #19	trpm2 (ENSSMAG00000010126) #20	ENSSMAG00000010180 #21	ENSSMAG00000010223 #22	xrcc5 (ENSSMAG00000010286) #24	ENSSMAG00000010326 #25	MARCHF4 (ENSSMAG00000010382) #27	SMARCAL1 (ENSSMAG00000010427) #28	nme9 (ENSSMAG00000010453) #29	zgc:162707 (ENSSMAG00000010513) #30	ehhadh (ENSSMAG00000010530) #31	tmem41aa (ENSSMAG00000010541) #32	igf2bp2a (ENSSMAG00000010576) #33	tra2b (ENSSMAG00000010614) #34	ENSSMAG00000010627 #35	ENSSMAG00000010640	glb1l (ENSSMAG00000010689)	ENSSMAG00000010739	ENSSMAG00000010851
Anabantaria	ANCESTRAL SPECIES	14	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000161051.a.a.a.a.b #36	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37
Anabantoidei	ANCESTRAL SPECIES	13	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT01100000263556.a.a.q.d	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000161051.a.a.a.a.b #36	ENSGT00390000005911 #37	ENSGT00950000182942.a.b
Climbing perch	MODERN SPECIES	12	ENSATEG00000021382 #8	ENSATEG00000021355 #9	ENSATEG00000021258 #10	ENSATEG00000029089 #11	ENSATEG00000021181 #12	ENSATEG00000021164 #13	ENSATEG00000021156 #14	ENSATEG00000028914	ENSATEG00000021143 #16	ENSATEG00000021089 #17	ENSATEG00000021072 #18	ENSATEG00000021031 #19	ENSATEG00000021006 #20	ENSATEG00000020918 #20	ENSATEG00000020870 #21	ENSATEG00000020810 #22	TMEM169 (ENSATEG00000020797) #23	xrcc5 (ENSATEG00000020733) #24	ENSATEG00000020687 #25	MARCHF4 (ENSATEG00000020649) #27	SMARCAL1 (ENSATEG00000020624) #28	nme9 (ENSATEG00000020557) #29	ENSATEG00000029040	zgc:162707 (ENSATEG00000025802) #30	ehhadh (ENSATEG00000020518) #31	tmem41aa (ENSATEG00000020502) #32	igf2bp2a (ENSATEG00000020389) #33	tra2b (ENSATEG00000020354) #34	ENSATEG00000020337 #35	ENSATEG00000020302 #36	ENSATEG00000020278 #37
Siamese fighting fish	MODERN SPECIES	11	BIN1 (ENSBSLG00000018210)	ihha (ENSBSLG00000018156) #7	snx4 (ENSBSLG00000016902) #8	ARSD (ENSBSLG00000016694) #10	ENSBSLG00000016662 #11	ENSBSLG00000015588 #12	ercc1 (ENSBSLG00000015472) #13	prmt2 (ENSBSLG00000015428) #14	ENSBSLG00000015389	ENSBSLG00000015374 #16	ENSBSLG00000013487 #17	ENSBSLG00000013077 #18	hycc2 (ENSBSLG00000012192) #19	trpm2 (ENSBSLG00000011733) #20	MAP3K13 (ENSBSLG00000011289) #21	PFKL (ENSBSLG00000008466) #22	TMEM169 (ENSBSLG00000008220) #23	xrcc5 (ENSBSLG00000007922) #24	COL6A2 (ENSBSLG00000007732) #25	MARCHF4 (ENSBSLG00000007287) #27	SMARCAL1 (ENSBSLG00000006782) #28	nme9 (ENSBSLG00000006456) #29	zgc:162707 (ENSBSLG00000006279) #30	ehhadh (ENSBSLG00000005946) #31	tmem41aa (ENSBSLG00000005941) #32	igf2bp2a (ENSBSLG00000005124) #33	tra2b (ENSBSLG00000004950) #34	ENSBSLG00000004919 #35	ENSBSLG00000026238 #36	glb1l (ENSBSLG00000026206)	ANKZF1 (ENSBSLG00000026199) #37
Zig-zag eel	MODERN SPECIES	13	ihha (ENSMAMG00000019587) #7	ENSMAMG00000019607 #8	ENSMAMG00000019630 #9	ENSMAMG00000019642 #10	ENSMAMG00000019648 #11	ENSMAMG00000019670 #12	ENSMAMG00000019693 #13	ENSMAMG00000025846 #14	ENSMAMG00000019704	ENSMAMG00000019714 #16	ENSMAMG00000019732 #17	ENSMAMG00000019834 #18	ENSMAMG00000019843 #19	trpm2 (ENSMAMG00000000410) #20	ENSMAMG00000000542 #21	ENSMAMG00000000621 #22	xrcc5 (ENSMAMG00000000708) #24	ENSMAMG00000000735 #25	ENSMAMG00000000772	ENSMAMG00000000791	ENSMAMG00000000828 #28	nme9 (ENSMAMG00000000849) #29	zgc:162707 (ENSMAMG00000025518) #30	ehhadh (ENSMAMG00000000910) #31	tmem41aa (ENSMAMG00000000927) #32	igf2bp2a (ENSMAMG00000000969) #33	tra2b (ENSMAMG00000001051) #34	ENSMAMG00000001075 #35	ENSMAMG00000001094	ENSMAMG00000001160 #37	glb1l (ENSMAMG00000001126)
Eupercaria	ANCESTRAL SPECIES	25	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00950000182882.A.b.b.e	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000161051.a.a.a.a.b #36	ENSGT00390000005911 #37	ENSGT00950000182942.a.b
Fugu	MODERN SPECIES		ENSTRUG00000025638	ENSTRUG00000013330 #11	ENSTRUG00000013178 #12	ENSTRUG00000029899	ENSTRUG00000022269	ercc1 (ENSTRUG00000013151) #13	prmt2 (ENSTRUG00000013061) #14	ENSTRUG00000027529	ENSTRUG00000013037 #16	DIP2A (ENSTRUG00000012903) #17	ENSTRUG00000012711 #18	hycc2 (ENSTRUG00000012635) #19	ENSTRUG00000023328	trpm2 (ENSTRUG00000012200) #20	MAP3K13 (ENSTRUG00000012102) #21	PFKL (ENSTRUG00000011575) #22	TMEM169 (ENSTRUG00000011553) #23	xrcc5 (ENSTRUG00000011292) #24	COL6A2 (ENSTRUG00000010965) #25	MARCHF4 (ENSTRUG00000010920) #27	SMARCAL1 (ENSTRUG00000010701) #28	nme9 (ENSTRUG00000010490) #29	zgc:162707 (ENSTRUG00000027774) #30	ehhadh (ENSTRUG00000010383) #31	tmem41aa (ENSTRUG00000010355) #32	igf2bp2a (ENSTRUG00000009908) #33	ENSTRUG00000020345 #35	fgc6ast2 (ENSTRUG00000009748) #36	ANKZF1 (ENSTRUG00000009630) #37	glb1l (ENSTRUG00000009251)	ENSTRUG00000008967
Tetraodon	MODERN SPECIES	13	TMEM198 (ENSTNIG00000016447)	BIN1 (ENSTNIG00000016448)	ihha (ENSTNIG00000016449) #7	snx4 (ENSTNIG00000016450) #8	ARSD (ENSTNIG00000016451) #10	ENSTNIG00000016452 #11	ENSTNIG00000016453 #12	ercc1 (ENSTNIG00000016454) #13	prmt2 (ENSTNIG00000016455) #14	ENSTNIG00000016456 #16	DIP2A (ENSTNIG00000016457) #17	ENSTNIG00000016458 #18	hycc2 (ENSTNIG00000016459) #19	trpm2 (ENSTNIG00000016460) #20	MAP3K13 (ENSTNIG00000016461) #21	PFKL (ENSTNIG00000016462) #22	TMEM169 (ENSTNIG00000016463) #23	xrcc5 (ENSTNIG00000016464) #24	COL6A2 (ENSTNIG00000016465) #25	MARCHF4 (ENSTNIG00000016466) #27	SMARCAL1 (ENSTNIG00000016467) #28	nme9 (ENSTNIG00000016468) #29	zgc:162707 (ENSTNIG00000016469) #30	ehhadh (ENSTNIG00000016470) #31	tmem41aa (ENSTNIG00000016471) #32	igf2bp2a (ENSTNIG00000016472) #33	tra2b (ENSTNIG00000000790) #34	ENSTNIG00000016473 #35	ENSTNIG00000016474 #36	ANKZF1 (ENSTNIG00000016475) #37	glb1l (ENSTNIG00000016476)
Eupecaria_A	ANCESTRAL SPECIES	24	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37
Ballan wrasse	MODERN SPECIES	387				prmt2 (ENSLBEG00000001807) #14	ENSLBEG00000001858	ENSLBEG00000001880 #16	DIP2A (ENSLBEG00000002017) #17	ENSLBEG00000002132 #18	hycc2 (ENSLBEG00000002161) #19	trpm2 (ENSLBEG00000002282) #20	ENSLBEG00000002645 #20	ENSLBEG00000002693 #20	ENSLBEG00000002747 #20	ENSLBEG00000003014 #20	MAP3K13 (ENSLBEG00000003152) #21	PFKL (ENSLBEG00000003240) #22	TMEM169 (ENSLBEG00000003297) #23	xrcc5 (ENSLBEG00000003316) #24	COL6A2 (ENSLBEG00000003366) #25	MARCHF4 (ENSLBEG00000003451) #27	SMARCAL1 (ENSLBEG00000003493) #28	ENSLBEG00000003548	nme9 (ENSLBEG00000003566) #29	zgc:162707 (ENSLBEG00000003609) #30	ehhadh (ENSLBEG00000003623) #31	tmem41aa (ENSLBEG00000003655) #32	igf2bp2a (ENSLBEG00000003710) #33	ENSLBEG00000003842
Eupecaria_B	ANCESTRAL SPECIES	24	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37	ENSGT00950000182942.a.b
Perciformes	ANCESTRAL SPECIES	23	ENSGT00950000182882.A.b.b.e	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37	ENSGT00950000182942.a.b
Cottioidei	ANCESTRAL SPECIES	14	ENSGT00950000182882.A.b.b.e	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000161051.a.a.a.a.b #36	ENSGT00390000005911 #37	ENSGT00950000182942.a.b
Lumpfish	MODERN SPECIES	13	BIN1 (ENSCLMG00005022301)	ihha (ENSCLMG00005022296) #7	snx4 (ENSCLMG00005022249) #8	ARSD (ENSCLMG00005022248) #10	ENSCLMG00005022247 #11	ENSCLMG00005022246 #12	ercc1 (ENSCLMG00005022245) #13	ENSCLMG00005022244 #14	ENSCLMG00005022243	ENSCLMG00005022242 #16	DIP2A (ENSCLMG00005020925) #17	ENSCLMG00005020839 #18	hycc2 (ENSCLMG00005020836) #19	trpm2 (ENSCLMG00005020832) #20	MAP3K13 (ENSCLMG00005020572) #21	PFKL (ENSCLMG00005020466) #22	TMEM169 (ENSCLMG00005020464) #23	xrcc5 (ENSCLMG00005020365) #24	COL6A2 (ENSCLMG00005020111) #25	MARCHF4 (ENSCLMG00005020098) #27	SMARCAL1 (ENSCLMG00005020081) #28	ENSCLMG00005020079 #29	nme9 (ENSCLMG00005020077) #29	zgc:162707 (ENSCLMG00005020075) #30	ehhadh (ENSCLMG00005020073) #31	tmem41aa (ENSCLMG00005020072) #32	igf2bp2a (ENSCLMG00005020011) #33	tra2b (ENSCLMG00005019973) #34	ENSCLMG00005019965 #35	ENSCLMG00005019962 #36	ANKZF1 (ENSCLMG00005019959) #37
Stickleback	MODERN SPECIES	16	ENSGACG00000006329	ARSD (ENSGACG00000006325) #10	ENSGACG00000006317 #11	ENSGACG00000006314 #12	ENSGACG00000006312	ercc1 (ENSGACG00000006301) #13	prmt2 (ENSGACG00000006286) #14	ENSGACG00000006283 #15	ENSGACG00000006275 #16	DIP2A (ENSGACG00000006240) #17	ENSGACG00000006235 #18	hycc2 (ENSGACG00000006226) #19	trpm2 (ENSGACG00000006218) #20	trpm2 (ENSGACG00000006203) #20	MAP3K13 (ENSGACG00000006196) #21	PFKL (ENSGACG00000006173) #22	TMEM169 (ENSGACG00000006165) #23	xrcc5 (ENSGACG00000006130) #24	COL6A2 (ENSGACG00000006089) #25	MARCHF4 (ENSGACG00000006082) #27	SMARCAL1 (ENSGACG00000006073) #28	nme9 (ENSGACG00000006066) #29	zgc:162707 (ENSGACG00000006064) #30	ehhadh (ENSGACG00000006057) #31	tmem41aa (ENSGACG00000006043) #32	igf2bp2a (ENSGACG00000005991) #33	tra2b (ENSGACG00000005986) #34	ENSGACG00000005978 #35	ENSGACG00000005972 #37	glb1l (ENSGACG00000005954)	ENSGACG00000005949
Perciformes_a	ANCESTRAL SPECIES	23	ENSGT00950000182882.A.b.b.e	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37	ENSGT00950000182942.a.b
Pike perch	MODERN SPECIES	1	ENSSLUG00000008514 ##11	ENSSLUG00000008503 #12	ercc1 (ENSSLUG00000008493) #13	prmt2 (ENSSLUG00000008483) #14	ENSSLUG00000008475	ENSSLUG00000008464 #16	DIP2A (ENSSLUG00000000757) #17	ENSSLUG00000000142 #18	hycc2 (ENSSLUG00000000104) #19	ENSSLUG00000000087 #20	ENSSLUG00000000083 #20	trpm2 (ENSSLUG00000000073) #20	trpm2 (ENSSLUG00000000054) #20	ENSSLUG00000000050 #20	MAP3K13 (ENSSLUG00000023747) #21	PFKL (ENSSLUG00000023509) #22	TMEM169 (ENSSLUG00000023466) #23	xrcc5 (ENSSLUG00000023452) #24	ENSSLUG00000023446 #25	MARCHF4 (ENSSLUG00000023443) #27	SMARCAL1 (ENSSLUG00000023356) #28	nme9 (ENSSLUG00000023329) #29	ENSSLUG00000023325	zgc:162707 (ENSSLUG00000023322) #30	ehhadh (ENSSLUG00000023319) #31	tmem41aa (ENSSLUG00000023315) #32	igf2bp2a (ENSSLUG00000023280) #33	tra2b (ENSSLUG00000023261) #34	ENSSLUG00000023250 #35	ENSSLUG00000023243	ANKZF1 (ENSSLUG00000023223) #37
Channel bull blenny	MODERN SPECIES	13	ube2al (ENSCGOG00000020073)	ankrd10b (ENSCGOG00000020066)	sik1 (ENSCGOG00000019947)	u2af1 (ENSCGOG00000019940)	gabpa (ENSCGOG00000019802)	appb (ENSCGOG00000019644)	piga (ENSCGOG00000019638)	asb11 (ENSCGOG00000019636)	GRPR (ENSCGOG00000019633)	xk (ENSCGOG00000019630)	DYNLT3 (ENSCGOG00000019627)	SYTL5 (ENSCGOG00000019557)	srpx (ENSCGOG00000019551)	ENSCGOG00000019549	ENSCGOG00000019548	PFKL (ENSCGOG00000013823) #22	TMEM169 (ENSCGOG00000013665) #23	xrcc5 (ENSCGOG00000013112) #24	COL6A2 (ENSCGOG00000024729) #25	MARCHF4 (ENSCGOG00000024728) #27	SMARCAL1 (ENSCGOG00000024727) #28	nme9 (ENSCGOG00000024726) #29	zgc:162707 (ENSCGOG00000024725) #30	ehhadh (ENSCGOG00000024724) #31	tmem41aa (ENSCGOG00000024723) #32	igf2bp2a (ENSCGOG00000024722) #33	tra2b (ENSCGOG00000024721) #34	ENSCGOG00000024720 #35	ENSCGOG00000024719	ANKZF1 (ENSCGOG00000024717) #37	glb1l (ENSCGOG00000024716)
Eupecaria_C	ANCESTRAL SPECIES	24	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000161051.a.a.a.a.b #36	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37
Gilthead seabream	MODERN SPECIES	23	ENSSAUG00010027623 #9	ARSD (ENSSAUG00010027621) #10	ENSSAUG00010027618 #11	ENSSAUG00010027617 #12	ercc1 (ENSSAUG00010027616) #13	prmt2 (ENSSAUG00010027615) #14	ENSSAUG00010027614	ENSSAUG00010027613 #16	ENSSAUG00010027612 #16	ENSSAUG00010027611 #16	DIP2A (ENSSAUG00010027610) #17	ENSSAUG00010027609 #18	hycc2 (ENSSAUG00010027608) #19	trpm2 (ENSSAUG00010027607) #20	MAP3K13 (ENSSAUG00010027605) #21	PFKL (ENSSAUG00010027515) #22	TMEM169 (ENSSAUG00010027458) #23	xrcc5 (ENSSAUG00010027408) #24	ENSSAUG00010027394 #25	MARCHF4 (ENSSAUG00010027393) #27	SMARCAL1 (ENSSAUG00010027379) #28	nme9 (ENSSAUG00010027377) #29	zgc:162707 (ENSSAUG00010027376) #30	ehhadh (ENSSAUG00010027375) #31	tmem41aa (ENSSAUG00010027374) #32	igf2bp2a (ENSSAUG00010027330) #33	tra2b (ENSSAUG00010027319) #34	ENSSAUG00010027315 #35	ENSSAUG00010027313	ANKZF1 (ENSSAUG00010027309) #37	glb1l (ENSSAUG00010027170)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	24	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000161051.a.a.a.a.b #36	ENSGT00390000005911 #37	ENSGT00950000182942.a.b
European seabass	MODERN SPECIES	5	ENSDLAG00005010771	ihha (ENSDLAG00005033424) #7	ENSDLAG00005011314 #8	ENSDLAG00005011575 #10	ENSDLAG00005011609 #11	ENSDLAG00005031289 #12	ENSDLAG00005011660 #13	ENSDLAG00005032364 #14	ENSDLAG00005011731	ENSDLAG00005031857 #16	ENSDLAG00005011798 #17	ENSDLAG00005013519 #19	ENSDLAG00005013492 #18	trpm2 (ENSDLAG00005014086) #20	ENSDLAG00005014136 #21	ENSDLAG00005014466 #22	ENSDLAG00005018228 #23	ENSDLAG00005019485 #25	MARCHF4 (ENSDLAG00005019516) #27	SMARCAL1 (ENSDLAG00005019533) #28	nme9 (ENSDLAG00005019963) #29	ehhadh (ENSDLAG00005020031) #31	tmem41aa (ENSDLAG00005027741) #32	igf2bp2a (ENSDLAG00005020121) #33	tra2b (ENSDLAG00005021470) #34	ENSDLAG00005000115 #35	ENSDLAG00005000133 #36	ENSDLAG00005000283	ENSDLAG00005000671	ENSDLAG00005030476	ENSDLAG00005030680
Large yellow croaker	MODERN SPECIES	490	ihha (ENSLCRG00005021917) #7	snx4 (ENSLCRG00005021921) #8	ENSLCRG00005021966 #9	ARSD (ENSLCRG00005021977) #10	ENSLCRG00005022015 #11	ENSLCRG00005000815 #12	ercc1 (ENSLCRG00005000836) #13	prmt2 (ENSLCRG00005000855) #14	ENSLCRG00005000869	ENSLCRG00005000879 #16	DIP2A (ENSLCRG00005000968) #17	ENSLCRG00005003528 #18	hycc2 (ENSLCRG00005003539) #19	trpm2 (ENSLCRG00005003855) #20	MAP3K13 (ENSLCRG00005006646) #21	PFKL (ENSLCRG00005007069) #22	TMEM169 (ENSLCRG00005007803) #23	TMEM169 (ENSLCRG00005007806) #23	xrcc5 (ENSLCRG00005007819) #24	COL6A2 (ENSLCRG00005009580) #25	SMARCAL1 (ENSLCRG00005009591) #28	nme9 (ENSLCRG00005009804) #29	zgc:162707 (ENSLCRG00005009805) #30	ehhadh (ENSLCRG00005009806) #31	tmem41aa (ENSLCRG00005009808) #32	igf2bp2a (ENSLCRG00005009811) #33	ENSLCRG00005010177	tra2b (ENSLCRG00005010179) #34	ENSLCRG00005010183 #35	ENSLCRG00005010188 #36	ANKZF1 (ENSLCRG00005010191) #37
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT01010000223530.a	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00740000117080	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35
Atherinomorphae	ANCESTRAL SPECIES	13	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT01010000223530.a	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00740000117080	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35
Cyprinodontiformes	ANCESTRAL SPECIES	15	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT01010000223530.a	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00740000117080	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35
Aplocheiloidei	ANCESTRAL SPECIES	6	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT01010000223530.a	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37	ENSGT00950000182942.a.b
Mangrove rivulus	MODERN SPECIES	78											DIP2A (ENSKMAG00000011203) #17	ENSKMAG00000011549 #18	hycc2 (ENSKMAG00000011583) #19	trpm2 (ENSKMAG00000011719) #20	MAP3K13 (ENSKMAG00000011794) #21	PFKL (ENSKMAG00000011853) #22	TMEM169 (ENSKMAG00000011897) #23	xrcc5 (ENSKMAG00000011921) #24	COL6A2 (ENSKMAG00000011962) #25	MARCHF4 (ENSKMAG00000012001) #27	SMARCAL1 (ENSKMAG00000012023) #28	nme9 (ENSKMAG00000012056) #29	zgc:162707 (ENSKMAG00000012092) #30	ehhadh (ENSKMAG00000012099) #31	tmem41aa (ENSKMAG00000012117) #32	igf2bp2a (ENSKMAG00000012177) #33	tra2b (ENSKMAG00000012273) #34	ENSKMAG00000012295 #35	ENSKMAG00000012311	ANKZF1 (ENSKMAG00000012399) #37	glb1l (ENSKMAG00000012339)
Turquoise killifish	MODERN SPECIES	1623	ENSNFUG00015025221	ENSNFUG00015025219 #11	ENSNFUG00015025218 #12	ENSNFUG00015025216	ercc1 (ENSNFUG00015025214) #13	prmt2 (ENSNFUG00015025212) #14	CABZ01067071.1 (ENSNFUG00015025211)	ENSNFUG00015025210 #16	DIP2A (ENSNFUG00015025203) #17	ENSNFUG00015025202	CFLAR (ENSNFUG00015025201) #18	FAM126B (ENSNFUG00015025198) #19	TRPM2 (ENSNFUG00015025173) #20	MAP3K13 (ENSNFUG00015025154) #21	ENSNFUG00015025139	PFKL (ENSNFUG00015025023) #22	TMEM169 (ENSNFUG00015025012) #23	xrcc5 (ENSNFUG00015024995) #24	COL6A2 (ENSNFUG00015024962) #25	DNAL1 (ENSNFUG00015024954)	MARCH4 (ENSNFUG00015024950) #27	SMARCAL1 (ENSNFUG00015024913) #28	nme9 (ENSNFUG00015024888) #29	zgc:162707 (ENSNFUG00015024880) #30	ehhadh (ENSNFUG00015024876) #31	TMEM41AA (ENSNFUG00015024872) #32	IGF2BP2A (ENSNFUG00015024804) #33	tra2b (ENSNFUG00015024781) #34	ENSNFUG00015024694 #35	ENSNFUG00015024684	ANKZF1 (ENSNFUG00015024679) #37
Cyprinodontoidei	ANCESTRAL SPECIES	13	ENSGT00950000182882.A.b.b.e	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00740000117080	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35
Poeciliinae	ANCESTRAL SPECIES	25	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b.f #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866.o.a #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404.nb.b.a.a.a #20	ENSGT00940000156404.nb.a #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00740000117080	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158208.b	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000161051.a.a.a.a.b #36
Poecilia	ANCESTRAL SPECIES	13	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b.f #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866.o.a #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404.nb.b.a.a.a #20	ENSGT00940000156404.nb.a #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00740000117080	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158208.b	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000161051.a.a.a.a.b #36
NAME_6	ANCESTRAL SPECIES	265					ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866.o.a #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404.nb.b.a.a.a #20	ENSGT00940000156404.nb.a #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00740000117080	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158208.b	ENSGT00940000157608 #28	ENSGT00940000164537 #29
Sailfin molly	MODERN SPECIES	268				ercc1 (ENSPLAG00000000472) #13	prmt2 (ENSPLAG00000022074) #14	ENSPLAG00000022041 #16	ENSPLAG00000022010	ENSPLAG00000021985 #16	DIP2A (ENSPLAG00000021961) #17	ENSPLAG00000021848 #18	hycc2 (ENSPLAG00000021843) #19	ENSPLAG00000021829 #20	trpm2 (ENSPLAG00000021799) #20	trpm2 (ENSPLAG00000021685) #20	MAP3K13 (ENSPLAG00000021630) #21	PFKL (ENSPLAG00000021587) #22	TMEM169 (ENSPLAG00000021551) #23	xrcc5 (ENSPLAG00000021546) #24	COL6A2 (ENSPLAG00000021540) #25	ENSPLAG00000021527 #26	MARCHF9 (ENSPLAG00000021521)
Amazon molly	MODERN SPECIES	697														trpm2 (ENSPFOG00000000056) #20	MAP3K13 (ENSPFOG00000000130) #21	PFKL (ENSPFOG00000000166) #22	ENSPFOG00000023152	TMEM169 (ENSPFOG00000000226) #23	xrcc5 (ENSPFOG00000000246) #24	COL6A2 (ENSPFOG00000000302) #25	MARCHF9 (ENSPFOG00000000507)	SMARCAL1 (ENSPFOG00000000560) #28	nme9 (ENSPFOG00000000739) #29
Guppy	MODERN SPECIES	450	snx4 (ENSPREG00000010854) #8	ARSD (ENSPREG00000010574) #10	ENSPREG00000010525 #11	ENSPREG00000010502 #11	ENSPREG00000010465 #12	ercc1 (ENSPREG00000010451) #13	prmt2 (ENSPREG00000010427) #14	ENSPREG00000010413	ENSPREG00000010406 #16	ENSPREG00000010389 #16	DIP2A (ENSPREG00000010145) #17	ENSPREG00000010084 #18	hycc2 (ENSPREG00000010028) #19	TRPM2 (ENSPREG00000009936) #20	MAP3K13 (ENSPREG00000009876) #21	PFKL (ENSPREG00000009825) #22	TMEM169 (ENSPREG00000009814) #23	xrcc5 (ENSPREG00000009711) #24	COL6A2 (ENSPREG00000009680) #25	MARCHF9 (ENSPREG00000009664)	SMARCAL1 (ENSPREG00000009591) #28	ENSPREG00000009577	nme9 (ENSPREG00000009546) #29	zgc:162707 (ENSPREG00000009511) #30	ehhadh (ENSPREG00000009505) #31	tmem41aa (ENSPREG00000009491) #32	igf2bp2a (ENSPREG00000009440) #33	tra2b (ENSPREG00000009405) #34	ENSPREG00000009384 #35	ENSPREG00000009375 #36	ANKZF1 (ENSPREG00000009367) #37
Platyfish	MODERN SPECIES	21	ihha (ENSXMAG00000015886) #7	snx4 (ENSXMAG00000015869) #8	ARSD (ENSXMAG00000015844) #10	ENSXMAG00000015840 #11	ENSXMAG00000015816 #12	ercc1 (ENSXMAG00000015806) #13	prmt2 (ENSXMAG00000015793) #14	ENSXMAG00000026615	ENSXMAG00000016351 #16	DIP2A (ENSXMAG00000016253) #17	ENSXMAG00000015789 #18	hycc2 (ENSXMAG00000015770) #19	trpm2 (ENSXMAG00000015757) #20	trpm2 (ENSXMAG00000015702) #20	MAP3K13 (ENSXMAG00000015692) #21	PFKL (ENSXMAG00000015646) #22	TMEM169 (ENSXMAG00000015642) #23	xrcc5 (ENSXMAG00000015625) #24	COL6A2 (ENSXMAG00000015599) #25	MARCHF9 (ENSXMAG00000021114)	SMARCAL1 (ENSXMAG00000015575) #28	nme9 (ENSXMAG00000015556) #29	zgc:162707 (ENSXMAG00000022603) #30	ehhadh (ENSXMAG00000021635) #31	tmem41aa (ENSXMAG00000015534) #32	igf2bp2a (ENSXMAG00000015507) #33	tra2b (ENSXMAG00000001784) #34	ENSXMAG00000015483 #35	ENSXMAG00000015480	ENSXMAG00000015465 #37	glb1l (ENSXMAG00000015413)
NAME_4	ANCESTRAL SPECIES	32	ENSGT00950000182882.A.b.b.e	ENSGT00940000164444.a.d #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d
Mummichog	MODERN SPECIES	2402						DIP2A (ENSFHEG00000009229) #17	ENSFHEG00000009144	ENSFHEG00000009095 #18	hycc2 (ENSFHEG00000009077) #19	ENSFHEG00000009018 #20	ENSFHEG00000008954 #20	ENSFHEG00000008885 #20	ENSFHEG00000008813 #20	ENSFHEG00000008787 #20	MAP3K13 (ENSFHEG00000008670) #21	PFKL (ENSFHEG00000008593) #22	TMEM169 (ENSFHEG00000008494) #23	xrcc5 (ENSFHEG00000008475) #24	ENSFHEG00000008458 #25	ENSFHEG00000008422 #26	MARCHF4 (ENSFHEG00000008402) #27	SMARCAL1 (ENSFHEG00000008380) #28	nme9 (ENSFHEG00000008367) #29	zgc:162707 (ENSFHEG00000008323) #30	ehhadh (ENSFHEG00000008315) #31	tmem41aa (ENSFHEG00000008292) #32	igf2bp2a (ENSFHEG00000008263) #33	tra2b (ENSFHEG00000008203) #34	ENSFHEG00000008189 #35	ENSFHEG00000008172	ENSFHEG00000008104 #37
Sheepshead minnow	MODERN SPECIES	468		ENSCVAG00000019689 #7	snx4 (ENSCVAG00000019663) #8	ARSD (ENSCVAG00000019609) #10	ENSCVAG00000019594 #11	ENSCVAG00000019566 #12	ercc1 (ENSCVAG00000019532) #13	prmt2 (ENSCVAG00000019527) #14	ENSCVAG00000019519	ENSCVAG00000019510 #16	DIP2A (ENSCVAG00000019472) #17	ENSCVAG00000019371 #18	hycc2 (ENSCVAG00000019237) #19	trpm2 (ENSCVAG00000019145) #20	MAP3K13 (ENSCVAG00000019010) #21	PFKL (ENSCVAG00000018982) #22	TMEM169 (ENSCVAG00000018924) #23	xrcc5 (ENSCVAG00000018914) #24	ENSCVAG00000018898 #25	ENSCVAG00000018852 #26	MARCHF9 (ENSCVAG00000018810)	SMARCAL1 (ENSCVAG00000018780) #28	ENSCVAG00000018766	nme9 (ENSCVAG00000018754) #29
Oryzias	ANCESTRAL SPECIES	10	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866.l.a #16	ENSGT01100000263521.b #15	ENSGT00940000164866.k #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37
Oryzias_b	ANCESTRAL SPECIES	10	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866.l.a #16	ENSGT01100000263521.b #15	ENSGT00940000164866.k #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911.k #37
Indian medaka	MODERN SPECIES	18	BIN1 (ENSOMEG00000001504)	ihha (ENSOMEG00000001513) #7	snx4 (ENSOMEG00000001521) #8	ARSD (ENSOMEG00000001528) #10	ENSOMEG00000001545 #11	ENSOMEG00000001560 #12	ercc1 (ENSOMEG00000001587) #13	prmt2 (ENSOMEG00000001593) #14	ENSOMEG00000001598 #15	ENSOMEG00000001602 #16	DIP2A (ENSOMEG00000001649) #17	ENSOMEG00000001680 #18	hycc2 (ENSOMEG00000001700) #19	trpm2 (ENSOMEG00000001747) #20	MAP3K13 (ENSOMEG00000001768) #21	PFKL (ENSOMEG00000001783) #22	TMEM169 (ENSOMEG00000001790) #23	xrcc5 (ENSOMEG00000001816) #24	ENSOMEG00000001820 #25	ENSOMEG00000001828 #26	MARCHF4 (ENSOMEG00000001832) #27	SMARCAL1 (ENSOMEG00000001845) #28	nme9 (ENSOMEG00000001858) #29	zgc:162707 (ENSOMEG00000001863) #30	ehhadh (ENSOMEG00000001872) #31	tmem41aa (ENSOMEG00000001879) #32	igf2bp2a (ENSOMEG00000001908) #33	tra2b (ENSOMEG00000000738) #34	ENSOMEG00000001926 #35	ENSOMEG00000001932	ENSOMEG00000001937 #37
Javanese ricefish	MODERN SPECIES	13	myl1 (ENSOJAG00000023978)	CPS1 (ENSOJAG00000023907)	ERBB4 (ENSOJAG00000023771)	IKZF2 (ENSOJAG00000023709)	vwc2l (ENSOJAG00000023705)	BARD1 (ENSOJAG00000023702)	ABCA12 (ENSOJAG00000023678)	pofut2 (ENSOJAG00000023650)	MPPED1 (ENSOJAG00000023646)	slco1d1 (ENSOJAG00000023608)	SLC2A13 (ENSOJAG00000023581)	DIP2A (ENSOJAG00000023414) #17	ENSOJAG00000023347 #18	hycc2 (ENSOJAG00000023326) #19	MAP3K13 (ENSOJAG00000023295) #21	PFKL (ENSOJAG00000023258) #22	TMEM169 (ENSOJAG00000023227) #23	xrcc5 (ENSOJAG00000023123) #24	MARCHF4 (ENSOJAG00000023073) #27	SMARCAL1 (ENSOJAG00000022962) #28	nme9 (ENSOJAG00000022929) #29	zgc:162707 (ENSOJAG00000022928) #30	ehhadh (ENSOJAG00000022915) #31	tmem41aa (ENSOJAG00000022894) #32	igf2bp2a (ENSOJAG00000022770) #33	tra2b (ENSOJAG00000022708) #34	ENSOJAG00000022707 #35	ENSOJAG00000022701	ANKZF1 (ENSOJAG00000022699) #37	ENSOJAG00000022216	ENSOJAG00000022176
Oryzias_a	ANCESTRAL SPECIES	21	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866.l.a #16	ENSGT00940000164866.l.b #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37	ENSGT00950000182942.a.b
Japanese Medaka HdrR	MODERN SPECIES	13	ARSD (ENSORLG00000016189) #10	ENSORLG00000016206 #11	ENSORLG00000028523	ENSORLG00000016217 #12	ercc1 (ENSORLG00000016225) #13	prmt2 (ENSORLG00000016240) #14	ENSORLG00000016243	ENSORLG00000024731 #16	ENSORLG00000019524 #17	ENSORLG00000025038 #16	DIP2A (ENSORLG00000016258) #17	cflar (ENSORLG00000016267) #18	hycc2 (ENSORLG00000016277) #19	trpm2 (ENSORLG00000016331) #20	MAP3K13 (ENSORLG00000016342) #21	PFKL (ENSORLG00000016369) #22	TMEM169 (ENSORLG00000022975) #23	xrcc5 (ENSORLG00000016396) #24	ENSORLG00000016429 #25	ENSORLG00000021789	MARCHF4 (ENSORLG00000016440) #27	SMARCAL1 (ENSORLG00000016455) #28	nme9 (ENSORLG00000016469) #29	zgc:162707 (ENSORLG00000016472) #30	ehhadh (ENSORLG00000016481) #31	tmem41aa (ENSORLG00000016494) #32	igf2bp2a (ENSORLG00000016532) #33	tra2b (ENSORLG00000016554) #34	mc6ast5 (ENSORLG00000016557) #35	mc6ast4 (ENSORLG00000016562)	ANKZF1 (ENSORLG00000016576) #37
Ovalentaria_B	ANCESTRAL SPECIES	12	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00950000182882.A.b.b.e	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00950000183126.a.p.a.o	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866.q.a.b.a #16	ENSGT00940000164866.q.a.a #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00950000183126.a.p.a.o.b	ENSGT00950000183126.a.p.a.o.a	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866.q.a.b.a #16	ENSGT00940000164866.q.a.a #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00950000183126.a.p.a.o.b	ENSGT00950000183126.a.p.a.o.a	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34
Haplochromini	ANCESTRAL SPECIES	19	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866.q.a.b.a #16	ENSGT00940000164866.r #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00950000183126.a.p.a.o.b	ENSGT00950000183126.a.p.a.o.a	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866.q.a.b.a #16	ENSGT00940000164866.q.b #16	ENSGT00940000164866.q.a.a #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00950000183126.a.p.a.o.b	ENSGT00950000183126.a.p.a.o.a	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34
Haplochromini_B	ANCESTRAL SPECIES	17	ENSGT00930000151029.i.a #8	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000165332.B	ENSGT00940000160683 #14	ENSGT00940000164866.q.a.b.a #16	ENSGT00940000164866.q.b #16	ENSGT00940000164866.q.a.a #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00950000183126.a.p.a.o.b	ENSGT00950000183126.a.p.a.o.a	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913 #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35
Eastern happy	MODERN SPECIES	7	ARSD (ENSACLG00000017616) #10	ENSACLG00000017564 #11	ENSACLG00000017506 #12	ercc1 (ENSACLG00000017486) #13	ENSACLG00000017480	prmt2 (ENSACLG00000017462) #14	ENSACLG00000017436 #16	ENSACLG00000017330 #16	ENSACLG00000017318	ENSACLG00000017309 #16	DIP2A (ENSACLG00000016955) #17	ENSACLG00000016906 #18	hycc2 (ENSACLG00000016763) #19	trpm2 (ENSACLG00000016644) #20	MAP3K13 (ENSACLG00000016481) #21	PFKL (ENSACLG00000016404) #22	TMEM169 (ENSACLG00000016388) #23	xrcc5 (ENSACLG00000016331) #24	COL6A2 (ENSACLG00000016186) #25	ENSACLG00000016169	ENSACLG00000016093	MARCHF4 (ENSACLG00000016071) #27	SMARCAL1 (ENSACLG00000015990) #28	nme9 (ENSACLG00000015875) #29	zgc:162707 (ENSACLG00000015853) #30	ehhadh (ENSACLG00000015819) #31	tmem41aa (ENSACLG00000015796) #32	igf2bp2a (ENSACLG00000015512) #33	tra2b (ENSACLG00000015461) #34	ENSACLG00000015432 #35	ENSACLG00000015369
Zebra mbuna	MODERN SPECIES	1098	ercc1 (ENSMZEG00005009646) #13	ENSMZEG00005009641	prmt2 (ENSMZEG00005009630) #14	ENSMZEG00005009612 #16	ENSMZEG00005009599	ntm (ENSMZEG00005009583)	opcml (ENSMZEG00005009567)	ENSMZEG00005009556	ENSMZEG00005009545	ENSMZEG00005009529 #16	DIP2A (ENSMZEG00005009388) #17	ENSMZEG00005009363 #18	hycc2 (ENSMZEG00005009350) #19	trpm2 (ENSMZEG00005009295) #20	MAP3K13 (ENSMZEG00005009269) #21	PFKL (ENSMZEG00005009192) #22	TMEM169 (ENSMZEG00005009179) #23	xrcc5 (ENSMZEG00005009043) #24	ENSMZEG00005009014 #25	TANC1 (ENSMZEG00005008882)	DAPL1 (ENSMZEG00005008853)	PKP4 (ENSMZEG00005008828)	ENSMZEG00005008806	upp2 (ENSMZEG00005008793)	ENSMZEG00005008772	ENSMZEG00005008721	ACVR1C (ENSMZEG00005008690)	CYTIP (ENSMZEG00005008668)	GALNT5 (ENSMZEG00005008302)	ENSMZEG00005008236	nr4a2a (ENSMZEG00005008220)
P. nyererei	MODERN SPECIES	304	ARSD (ENSPNYG00000019558) #10	ENSPNYG00000019569 #11	ENSPNYG00000019580 #12	ercc1 (ENSPNYG00000019606) #13	prmt2 (ENSPNYG00000019621) #14	ENSPNYG00000019648	ENSPNYG00000019666 #16	ENSPNYG00000019701 #16	ENSPNYG00000019740 #16	ENSPNYG00000019776 #16	DIP2A (ENSPNYG00000019802) #17	ENSPNYG00000019883 #18	hycc2 (ENSPNYG00000019965) #19	trpm2 (ENSPNYG00000000679) #20	MAP3K13 (ENSPNYG00000000790) #21	PFKL (ENSPNYG00000000802) #22	TMEM169 (ENSPNYG00000000898) #23	xrcc5 (ENSPNYG00000000911) #24	ENSPNYG00000000925 #25	ENSPNYG00000000944 #26	ENSPNYG00000000965	ENSPNYG00000000972	MARCHF4 (ENSPNYG00000000999) #27	SMARCAL1 (ENSPNYG00000001058) #28	ENSPNYG00000001099	nme9 (ENSPNYG00000001110) #29	zgc:162707 (ENSPNYG00000001153) #30	ehhadh (ENSPNYG00000001157) #31	ENSPNYG00000001166 #32	igf2bp2a (ENSPNYG00000001187) #33	tra2b (ENSPNYG00000001238) #34
Burton s mouthbrooder	MODERN SPECIES	292	ihha (ENSHBUG00000002444) #7	snx4 (ENSHBUG00000002456) #8	ARSD (ENSHBUG00000002466) #10	ENSHBUG00000002478 #11	ENSHBUG00000002501 #12	ercc1 (ENSHBUG00000002515) #13	prmt2 (ENSHBUG00000002521) #14	ENSHBUG00000002524	ENSHBUG00000002551 #16	ENSHBUG00000002573 #16	DIP2A (ENSHBUG00000002696) #17	ENSHBUG00000001010 #18	hycc2 (ENSHBUG00000001171) #19	trpm2 (ENSHBUG00000002764) #20	MAP3K13 (ENSHBUG00000002814) #21	PFKL (ENSHBUG00000002877) #22	TMEM169 (ENSHBUG00000002883) #23	xrcc5 (ENSHBUG00000002906) #24	COL6A2 (ENSHBUG00000002922) #25	ENSHBUG00000002949	MARCHF4 (ENSHBUG00000000068) #27	SMARCAL1 (ENSHBUG00000002973) #28	nme9 (ENSHBUG00000003004) #29	zgc:162707 (ENSHBUG00000003020) #30	ehhadh (ENSHBUG00000003028) #31	tmem41aa (ENSHBUG00000003047) #32	igf2bp2a (ENSHBUG00000003126) #33	tra2b (ENSHBUG00000003145) #34	ENSHBUG00000003161 #35	ENSHBUG00000003190	ANKZF1 (ENSHBUG00000003208) #37
Lyretail cichlid	MODERN SPECIES	303	snx4 (ENSNBRG00000017482) #8	ARSD (ENSNBRG00000017455) #10	ENSNBRG00000017391 #11	ENSNBRG00000017353 #12	ercc1 (ENSNBRG00000017310) #13	prmt2 (ENSNBRG00000017273) #14	ENSNBRG00000017262	ENSNBRG00000017248 #16	DIP2A (ENSNBRG00000017189) #17	ENSNBRG00000017163 #18	hycc2 (ENSNBRG00000017132) #19	ENSNBRG00000016863 #20	trpm2 (ENSNBRG00000016802) #20	ENSNBRG00000016764	MAP3K13 (ENSNBRG00000016703) #21	PFKL (ENSNBRG00000016638) #22	TMEM169 (ENSNBRG00000016609) #23	xrcc5 (ENSNBRG00000016487) #24	COL6A2 (ENSNBRG00000016418) #25	ENSNBRG00000016401	MARCHF4 (ENSNBRG00000016380) #27	SMARCAL1 (ENSNBRG00000016273) #28	ENSNBRG00000016254	nme9 (ENSNBRG00000016220) #29	zgc:162707 (ENSNBRG00000016203) #30	ehhadh (ENSNBRG00000016194) #31	tmem41aa (ENSNBRG00000016175) #32	igf2bp2a (ENSNBRG00000016140) #33	tra2b (ENSNBRG00000016092) #34	ENSNBRG00000016058 #35	ENSNBRG00000016037
Nile tilapia	MODERN SPECIES	7	snx4 (ENSONIG00000004151) #8	ENSONIG00000004145 #10	ENSONIG00000004142 #11	ENSONIG00000004137 #12	ercc1 (ENSONIG00000004132) #13	prmt2 (ENSONIG00000004127) #14	ENSONIG00000036478 #16	ENSONIG00000037894 #16	ENSONIG00000040443 #16	DIP2A (ENSONIG00000009096) #17	ENSONIG00000032971 #18	ENSONIG00000009095 #18	fam126b (ENSONIG00000031870) #19	trpm2 (ENSONIG00000009086) #20	MAP3K13 (ENSONIG00000009084) #21	PFKL (ENSONIG00000009075) #22	tmem169 (ENSONIG00000036428) #23	xrcc5 (ENSONIG00000009057) #24	COL6A2 (ENSONIG00000009044) #25	ENSONIG00000009040	ENSONIG00000034118	ENSONIG00000036866	MARCHF4 (ENSONIG00000009038) #27	SMARCAL1 (ENSONIG00000009036) #28	nme9 (ENSONIG00000009034) #29	zgc:162707 (ENSONIG00000029797) #30	ehhadh (ENSONIG00000036880) #31	tmem41aa (ENSONIG00000040431) #32	igf2bp2a (ENSONIG00000009029) #33	tra2b (ENSONIG00000009025) #34	ENSONIG00000009023 #35
Midas cichlid	MODERN SPECIES	1312										DIP2A (ENSACIG00000002167) #17	ENSACIG00000002126 #18	hycc2 (ENSACIG00000002107) #19	ENSACIG00000002037 #20	ENSACIG00000002000 #20	MAP3K13 (ENSACIG00000001962) #21	PFKL (ENSACIG00000001893) #22	TMEM169 (ENSACIG00000001883) #23	xrcc5 (ENSACIG00000001685) #24	ENSACIG00000001656 #25	ENSACIG00000001629 #26	ENSACIG00000001602	MARCHF4 (ENSACIG00000001550) #27	SMARCAL1 (ENSACIG00000001500) #28	ENSACIG00000001490	nme9 (ENSACIG00000001452) #29	zgc:162707 (ENSACIG00000001437) #30	ehhadh (ENSACIG00000001368) #31	tmem41aa (ENSACIG00000001348) #32	igf2bp2a (ENSACIG00000001308) #33	tra2b (ENSACIG00000001289) #34	ENSACIG00000001261 #35
Pomacentridae	ANCESTRAL SPECIES	17	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b.j.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000177394	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913.q #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d
Pomacentridae_A	ANCESTRAL SPECIES	14	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b.j.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913.q #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37
Amphiprion	ANCESTRAL SPECIES	8	ENSGT00940000164444.a #7	ENSGT00930000151029.i.a #8	ENSGT00940000177459 #9	ENSGT00940000161140 #10	ENSGT00940000159942.a.c.b.j.b #11	ENSGT00940000156607.a.b #12	ENSGT00390000011275 #13	ENSGT00940000160683 #14	ENSGT00940000165332.B	ENSGT00940000164866 #16	ENSGT00950000182997.a.b.b.a #17	ENSGT00530000064199 #18	ENSGT00390000011295.a #19	ENSGT00940000156404 #20	ENSGT00940000158216 #21	ENSGT00940000159292 #22	ENSGT00390000015276 #23	ENSGT00940000153239.A #24	ENSGT00940000155682.g.a #25	ENSGT01030000235116 #26	ENSGT00940000158179.b #27	ENSGT00940000157608 #28	ENSGT00940000164537 #29	ENSGT00390000006618 #30	ENSGT00940000157516 #31	ENSGT00940000163412 #32	ENSGT00940000154913.q #33	ENSGT00950000183009.db.b #34	ENSGT00940000161051.a.a.a.a.a #35	ENSGT00940000154856.A.a.d	ENSGT00390000005911 #37
Clown anemonefish	MODERN SPECIES	1499													hycc2 (ENSAOCG00000022407) #19	trpm2 (ENSAOCG00000022365) #20	MAP3K13 (ENSAOCG00000022293) #21	PFKL (ENSAOCG00000002417) #22	TMEM169 (ENSAOCG00000022166) #23
Orange clownfish	MODERN SPECIES	3	ENSAPEG00000014989 #10	ENSAPEG00000015006 #11	ENSAPEG00000015043 #11	ENSAPEG00000015062 #11	ENSAPEG00000015099 #12	ercc1 (ENSAPEG00000015157) #13	prmt2 (ENSAPEG00000015165) #14	ENSAPEG00000015178	ENSAPEG00000015186 #16	DIP2A (ENSAPEG00000015236) #17	ENSAPEG00000015432 #18	hycc2 (ENSAPEG00000015448) #19	trpm2 (ENSAPEG00000015548) #20	ENSAPEG00000015627	MAP3K13 (ENSAPEG00000015656) #21	PFKL (ENSAPEG00000015689) #22	TMEM169 (ENSAPEG00000015766) #23	xrcc5 (ENSAPEG00000015778) #24	ENSAPEG00000015807 #25	ENSAPEG00000015813 #26	MARCHF4 (ENSAPEG00000015828) #27	SMARCAL1 (ENSAPEG00000015861) #28	nme9 (ENSAPEG00000015896) #29	zgc:162707 (ENSAPEG00000015979) #30	ehhadh (ENSAPEG00000015995) #31	tmem41aa (ENSAPEG00000016010) #32	igf2bp2a (ENSAPEG00000016037) #33	tra2b (ENSAPEG00000016141) #34	ENSAPEG00000016161 #35	ENSAPEG00000016190	ENSAPEG00000016246 #37
Spiny chromis	MODERN SPECIES	247		ENSAPOG00000019214 #11	ENSAPOG00000019263 #11	ENSAPOG00000019299 #12	ercc1 (ENSAPOG00000019312) #13	ENSAPOG00000019351	ENSAPOG00000019370	prmt2 (ENSAPOG00000019380) #14	ENSAPOG00000019453 #16	DIP2A (ENSAPOG00000019584) #17	ENSAPOG00000019602	ENSAPOG00000019607 #18	hycc2 (ENSAPOG00000019672) #19	trpm2 (ENSAPOG00000019812) #20	MAP3K13 (ENSAPOG00000019855) #21	PFKL (ENSAPOG00000019989) #22	TMEM169 (ENSAPOG00000019993) #23	xrcc5 (ENSAPOG00000020006) #24	COL6A2 (ENSAPOG00000020016) #25	MARCHF4 (ENSAPOG00000020079) #27	SMARCAL1 (ENSAPOG00000020156) #28	nme9 (ENSAPOG00000020251) #29	zgc:162707 (ENSAPOG00000020273) #30	ehhadh (ENSAPOG00000020301) #31	ehhadh (ENSAPOG00000020320) #31
Bicolor damselfish	MODERN SPECIES	747					ENSSPAG00000000032 #11	ENSSPAG00000021761 #12	ercc1 (ENSSPAG00000021674) #13	prmt2 (ENSSPAG00000021664) #14	ENSSPAG00000021653	ENSSPAG00000021645 #16	DIP2A (ENSSPAG00000021512) #17	ENSSPAG00000021489 #18	hycc2 (ENSSPAG00000021461) #19	trpm2 (ENSSPAG00000021413) #20	MAP3K13 (ENSSPAG00000021367) #21	PFKL (ENSSPAG00000021312) #22	TMEM169 (ENSSPAG00000021305) #23
Tiger tail seahorse	MODERN SPECIES	313	ENSHCOG00000015460 #11	ENSHCOG00000017217 #12	ercc1 (ENSHCOG00000017316) #13	prmt2 (ENSHCOG00000017343) #14	ENSHCOG00000017354 #16	DIP2A (ENSHCOG00000017424) #17	ENSHCOG00000017437	ENSHCOG00000017456	ENSHCOG00000017464 #18	hycc2 (ENSHCOG00000017492) #19	ENSHCOG00000017504	trpm2 (ENSHCOG00000017597) #20	ENSHCOG00000017618 #20	ENSHCOG00000017629 #20	MAP3K13 (ENSHCOG00000017685) #21	PFKL (ENSHCOG00000017753) #22	TMEM169 (ENSHCOG00000017761) #23	xrcc5 (ENSHCOG00000017773) #24	COL6A2 (ENSHCOG00000017794) #25	MARCHF4 (ENSHCOG00000017906) #27	SMARCAL1 (ENSHCOG00000017921) #28	ENSHCOG00000017928 #29	nme9 (ENSHCOG00000017975) #29	zgc:162707 (ENSHCOG00000017988) #30	ehhadh (ENSHCOG00000018012) #31	tmem41aa (ENSHCOG00000018036) #32	igf2bp2a (ENSHCOG00000018090) #33	ANKZF1 (ENSHCOG00000018225) #37	glb1l (ENSHCOG00000018244)	ENSHCOG00000018260	ENSHCOG00000018273
Pinecone sodierfish	MODERN SPECIES	13	snx4 (ENSMMDG00005023926) #8	ENSMMDG00005024039 #9	ARSD (ENSMMDG00005024067) #10	ENSMMDG00005024156 #11	ENSMMDG00005024160 #12	mab21l3 (ENSMMDG00005024164)	ercc1 (ENSMMDG00005024166) #13	prmt2 (ENSMMDG00005024170) #14	ENSMMDG00005002510	ENSMMDG00005002521 #16	DIP2A (ENSMMDG00005002972) #17	ENSMMDG00005008769 #18	hycc2 (ENSMMDG00005008777) #19	trpm2 (ENSMMDG00005009219) #20	MAP3K13 (ENSMMDG00005009367) #21	PFKL (ENSMMDG00005009446) #22	TMEM169 (ENSMMDG00005011183) #23	xrcc5 (ENSMMDG00005011217) #24	ENSMMDG00005011762 #25	COL6A2 (ENSMMDG00005011763) #25	MARCHF4 (ENSMMDG00005011767) #27	SMARCAL1 (ENSMMDG00005011782) #28	ENSMMDG00005012370 #29	nme9 (ENSMMDG00005012373) #29	zgc:162707 (ENSMMDG00005012376) #30	ehhadh (ENSMMDG00005012377) #31	tmem41aa (ENSMMDG00005012383) #32	igf2bp2a (ENSMMDG00005012390) #33	tra2b (ENSMMDG00005012404) #34	ENSMMDG00005012405 #35	ENSMMDG00005012414
Cod	MODERN SPECIES	12	ENSGMOG00000030808	ENSGMOG00000017781 #13	ENSGMOG00000017765	ENSGMOG00000030992 #16	ENSGMOG00000017606 #17	ENSGMOG00000023701	ENSGMOG00000028059 #18	ENSGMOG00000009496 #19	ENSGMOG00000029329	ENSGMOG00000035105	trpm2 (ENSGMOG00000015349) #20	ENSGMOG00000035286	ENSGMOG00000011554 #21	ENSGMOG00000023839	ENSGMOG00000024551	ENSGMOG00000014643 #22	ENSGMOG00000023606	ENSGMOG00000034883 #23	xrcc5 (ENSGMOG00000014582) #24	ENSGMOG00000014528 #25	ENSGMOG00000029514	ENSGMOG00000002281	ENSGMOG00000030938	ENSGMOG00000037051	cerkl (ENSGMOG00000014633)	neurod1 (ENSGMOG00000027437)	ENSGMOG00000032801	PDE1A (ENSGMOG00000009168)	frzb (ENSGMOG00000013868)	dnajc10 (ENSGMOG00000000883)	ENSGMOG00000024544