Euarchontoglires_A	ANCESTRAL SPECIES	3	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Glires	ANCESTRAL SPECIES	15	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Rodentia	ANCESTRAL SPECIES	3	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Rodentia_B	ANCESTRAL SPECIES	11	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Myomorpha	ANCESTRAL SPECIES	33	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Mus	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00990000206984 #10	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Mus_A	ANCESTRAL SPECIES		ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00990000206984 #10	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Ryukyu mouse	MODERN SPECIES	11	Eid1 (MGP_CAROLIEiJ_G0024230) #7	Shc4 (MGP_CAROLIEiJ_G0024229) #8	Cep152 (MGP_CAROLIEiJ_G0024228) #9	MGP_CAROLIEiJ_G0024227 #10	Fbn1 (MGP_CAROLIEiJ_G0024226) #11	Dut (MGP_CAROLIEiJ_G0024225) #12	Slc12a1 (MGP_CAROLIEiJ_G0024224) #13	Ctxn2 (MGP_CAROLIEiJ_G0024223) #14	MGP_CAROLIEiJ_G0024222 #15	Slc24a5 (MGP_CAROLIEiJ_G0024221) #16	Sema6d (MGP_CAROLIEiJ_G0024220) #17	Sqor (MGP_CAROLIEiJ_G0024219) #18	Bloc1s6 (MGP_CAROLIEiJ_G0024218) #19	Slc30a4 (MGP_CAROLIEiJ_G0024217) #20	AA467197 (MGP_CAROLIEiJ_G0024216) #21	Gatm (MGP_CAROLIEiJ_G0024215) #22	Shf (MGP_CAROLIEiJ_G0024214) #23	Duox1 (MGP_CAROLIEiJ_G0024213) #24	Duoxa1 (MGP_CAROLIEiJ_G0024212) #25	Duoxa2 (MGP_CAROLIEiJ_G0024211) #26	Duox2 (MGP_CAROLIEiJ_G0024210) #27	Sord (MGP_CAROLIEiJ_G0024209) #28	Terb2 (MGP_CAROLIEiJ_G0024208) #29	Trim69 (MGP_CAROLIEiJ_G0024207) #30	B2m (MGP_CAROLIEiJ_G0024206) #31	Patl2 (MGP_CAROLIEiJ_G0024205) #32	MGP_CAROLIEiJ_G0024203 #33	MGP_CAROLIEiJ_G0024202 #34	MGP_CAROLIEiJ_G0024201 #35	Ctdspl2 (MGP_CAROLIEiJ_G0024200) #36	Golm2 (MGP_CAROLIEiJ_G0024199) #37
Mus_B	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00990000206984 #10	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397.s #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h.e.b	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a.m #36	ENSGT00530000063675.a #37
Mus_C	ANCESTRAL SPECIES		ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00990000206984 #10	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397.s #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h.f	ENSGT00390000016025.b.h.e.a	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a.m #36
spretus	MODERN SPECIES	11	Shc4 (MGP_SPRETEiJ_G0025149) #8	Cep152 (MGP_SPRETEiJ_G0025148) #9	MGP_SPRETEiJ_G0025147 #10	Fbn1 (MGP_SPRETEiJ_G0025146) #11	Dut (MGP_SPRETEiJ_G0025145) #12	Slc12a1 (MGP_SPRETEiJ_G0025144) #13	Ctxn2 (MGP_SPRETEiJ_G0025143) #14	MGP_SPRETEiJ_G0025142 #15	Myef2 (MGP_SPRETEiJ_G0025141) #15	Slc24a5 (MGP_SPRETEiJ_G0025140) #16	Sema6d (MGP_SPRETEiJ_G0025139) #17	Sqor (MGP_SPRETEiJ_G0025138) #18	Bloc1s6 (MGP_SPRETEiJ_G0025137) #19	Slc30a4 (MGP_SPRETEiJ_G0025136) #20	AA467197 (MGP_SPRETEiJ_G0025135) #21	Gatm (MGP_SPRETEiJ_G0025134) #22	Slc28a2 (MGP_SPRETEiJ_G0025133)	Slc28a2b (MGP_SPRETEiJ_G0025132)	Shf (MGP_SPRETEiJ_G0025131) #23	Duox1 (MGP_SPRETEiJ_G0025130) #24	Duoxa1 (MGP_SPRETEiJ_G0025129) #25	Duoxa2 (MGP_SPRETEiJ_G0025128) #26	Duox2 (MGP_SPRETEiJ_G0025127) #27	Sord (MGP_SPRETEiJ_G0025126) #28	Terb2 (MGP_SPRETEiJ_G0025125) #29	Trim69 (MGP_SPRETEiJ_G0025124) #30	B2m (MGP_SPRETEiJ_G0025123) #31	Patl2 (MGP_SPRETEiJ_G0025122) #32	Spg11 (MGP_SPRETEiJ_G0025121) #33	MGP_SPRETEiJ_G0025120 #34	Ctdspl2 (MGP_SPRETEiJ_G0025118) #36
Steppe mouse	MODERN SPECIES	2164											Sqor (ENSMSIG00000020464) #18	Bloc1s6 (ENSMSIG00000020442) #19	Slc30a4 (ENSMSIG00000020400) #20	AA467197 (ENSMSIG00000020373) #21	Spata5l1 (ENSMSIG00000020360)	Gatm (ENSMSIG00000020334) #22	ENSMSIG00000019812
Mouse	MODERN SPECIES	11	Eid1 (ENSMUSG00000091337) #7	Shc4 (ENSMUSG00000035109) #8	Cep152 (ENSMUSG00000068394) #9	Fbn1 (ENSMUSG00000027204) #11	Dut (ENSMUSG00000027203) #12	Slc12a1 (ENSMUSG00000027202) #13	Ctxn2 (ENSMUSG00000074872) #14	Myef2 (ENSMUSG00000027201) #15	Slc24a5 (ENSMUSG00000035183) #16	Sema6d (ENSMUSG00000027200) #17	Sqor (ENSMUSG00000005803) #18	Bloc1s6 (ENSMUSG00000005804) #19	Slc30a4 (ENSMUSG00000005802) #20	AA467197 (ENSMUSG00000033213) #21	Spata5l1 (ENSMUSG00000118663)	Gatm (ENSMUSG00000027199) #22	Slc28a2b (ENSMUSG00000079071)	Slc28a2 (ENSMUSG00000027219)	Shf (ENSMUSG00000033256) #23	Duox1 (ENSMUSG00000033268) #24	Duoxa1 (ENSMUSG00000027224) #25	Duoxa2 (ENSMUSG00000027225) #26	Duox2 (ENSMUSG00000068452) #27	Sord (ENSMUSG00000027227) #28	Terb2 (ENSMUSG00000027229) #29	Trim69 (ENSMUSG00000033368) #30	B2m (ENSMUSG00000060802) #31	Patl2 (ENSMUSG00000027233) #32	Spg11 (ENSMUSG00000033396) #33	Eif3j1 (ENSMUSG00000027236) #34	Ctdspl2 (ENSMUSG00000033411) #36
Shrew mouse	MODERN SPECIES	16	Shc4 (MGP_PahariEiJ_G0025675) #8	Cep152 (MGP_PahariEiJ_G0025674) #9	MGP_PahariEiJ_G0025673 #10	Fbn1 (MGP_PahariEiJ_G0025672) #11	Dut (MGP_PahariEiJ_G0025671) #12	Slc12a1 (MGP_PahariEiJ_G0025670) #13	Ctxn2 (MGP_PahariEiJ_G0025669) #14	MGP_PahariEiJ_G0025668 #15	MGP_PahariEiJ_G0025667 #15	Slc24a5 (MGP_PahariEiJ_G0025666) #16	Sema6d (MGP_PahariEiJ_G0025665) #17	Sqor (MGP_PahariEiJ_G0025664) #18	Bloc1s6 (MGP_PahariEiJ_G0025663) #19	Slc30a4 (MGP_PahariEiJ_G0025662) #20	AA467197 (MGP_PahariEiJ_G0025661) #21	Gatm (MGP_PahariEiJ_G0025660) #22	MGP_PahariEiJ_G0025659	MGP_PahariEiJ_G0025658	Shf (MGP_PahariEiJ_G0025657) #23	Duox1 (MGP_PahariEiJ_G0025656) #24	Duoxa1 (MGP_PahariEiJ_G0025655) #25	Duoxa2 (MGP_PahariEiJ_G0025654) #26	Duox2 (MGP_PahariEiJ_G0025653) #27	Sord (MGP_PahariEiJ_G0025652) #28	Terb2 (MGP_PahariEiJ_G0025651) #29	Trim69 (MGP_PahariEiJ_G0025650) #30	B2m (MGP_PahariEiJ_G0025649) #31	Patl2 (MGP_PahariEiJ_G0025648) #32	Spg11 (MGP_PahariEiJ_G0025647) #33	MGP_PahariEiJ_G0025646 #34	MGP_PahariEiJ_G0025645 #34
Rat	MODERN SPECIES	13	LOC120101650 (ENSRNOG00000031585)	Cep152 (ENSRNOG00000065817) #9	Fbn1 (ENSRNOG00000007302) #11	Dut (ENSRNOG00000007221) #12	Rpl32-ps1 (ENSRNOG00000032605)	Slc12a1 (ENSRNOG00000005367) #13	Ctxn2 (ENSRNOG00000037146) #14	Myef2 (ENSRNOG00000005258) #15	Slc24a5 (ENSRNOG00000005158) #16	Sema6d (ENSRNOG00000004812) #17	ENSRNOG00000063280	ENSRNOG00000062726	Sqor (ENSRNOG00000000172) #18	Slc30a4 (ENSRNOG00000000170) #20	Spata5l1 (ENSRNOG00000000169)	Gatm (ENSRNOG00000000168) #22	Tra2b-ps3 (ENSRNOG00000051627)	LOC120101644 (ENSRNOG00000068036)	LOC120101643 (ENSRNOG00000066870)	Slc28a2 (ENSRNOG00000028668)	Shf (ENSRNOG00000028685) #23	Duox1 (ENSRNOG00000033348) #24	Duoxa1 (ENSRNOG00000018005) #25	Duoxa2 (ENSRNOG00000017805) #26	Duox2 (ENSRNOG00000017395) #27	AC112350.1 (ENSRNOG00000047508)	Sord (ENSRNOG00000017291) #28	Terb2 (ENSRNOG00000037178) #29	Trim69 (ENSRNOG00000017157) #30	B2m (ENSRNOG00000017123) #31	Patl2 (ENSRNOG00000017061) #32
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.b #8	ENSGT00940000154796.A #7	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Chinese hamster chok1gshd	MODERN SPECIES	188	Eid1 (ENSCGRG00001010267) #7	Cep152 (ENSCGRG00001000747) #9	Fbn1 (ENSCGRG00001019162) #11	ENSCGRG00001010033 #12	Slc12a1 (ENSCGRG00001018507) #13	Ctxn2 (ENSCGRG00001010557) #14	ENSCGRG00001024080 #15	Slc24a5 (ENSCGRG00001014479) #16	Sema6d (ENSCGRG00001005980) #17	ENSCGRG00001010885	Sqor (ENSCGRG00001021599) #18	Bloc1s6 (ENSCGRG00001023580) #19	Slc30a4 (ENSCGRG00001015143) #20	AA467197 (ENSCGRG00001022257) #21	Spata5l1 (ENSCGRG00001022792)	Gatm (ENSCGRG00001021815) #22	ENSCGRG00001023496	Shf (ENSCGRG00001024124) #23	Duox1 (ENSCGRG00001021686) #24	Duoxa1 (ENSCGRG00001023908) #25	Duoxa2 (ENSCGRG00001002266) #26	Duox2 (ENSCGRG00001024853) #27	Sord (ENSCGRG00001006100) #28	Terb2 (ENSCGRG00001009237) #29	Trim69 (ENSCGRG00001016620) #30	B2M (ENSCGRG00001018239) #31	Patl2 (ENSCGRG00001010801) #32	Spg11 (ENSCGRG00001011033) #33	ENSCGRG00001009334 #34	Ctdspl2 (ENSCGRG00001005065) #36	Golm2 (ENSCGRG00001015365) #37
Golden Hamster	MODERN SPECIES	631	ENSMAUG00000021022 #8	Cep152 (ENSMAUG00000013711) #9	Fbn1 (ENSMAUG00000019785) #11	Dut (ENSMAUG00000000956) #12	Slc12a1 (ENSMAUG00000004531) #13	Ctxn2 (ENSMAUG00000008152) #14	ENSMAUG00000019642 #15	Slc24a5 (ENSMAUG00000010924) #16	ENSMAUG00000009790	Sema6d (ENSMAUG00000017126) #17	ENSMAUG00000009422 #18	Bloc1s6 (ENSMAUG00000013622) #19	Slc30a4 (ENSMAUG00000016970) #20	AA467197 (ENSMAUG00000008273) #21	Spata5l1 (ENSMAUG00000004328)	Gatm (ENSMAUG00000003375) #22	ENSMAUG00000004595	Shf (ENSMAUG00000022235) #23	Duox1 (ENSMAUG00000021739) #24	Duoxa1 (ENSMAUG00000021016) #25	Duoxa2 (ENSMAUG00000019412) #26	Duox2 (ENSMAUG00000014703) #27	Sord (ENSMAUG00000001896) #28	B2m (ENSMAUG00000022234) #31	Patl2 (ENSMAUG00000001008) #32	Spg11 (ENSMAUG00000010225) #33	ENSMAUG00000019190 #34	Ctdspl2 (ENSMAUG00000015192) #36	Golm2 (ENSMAUG00000005066) #37	ENSMAUG00000000797	Frmd5 (ENSMAUG00000018567)
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Prairie vole	MODERN SPECIES	81	Shc4 (ENSMOCG00000020474) #8	Cep152 (ENSMOCG00000016204) #9	Fbn1 (ENSMOCG00000016631) #11	Dut (ENSMOCG00000009765) #12	Slc12a1 (ENSMOCG00000017261) #13	Ctxn2 (ENSMOCG00000020162) #14	ENSMOCG00000006917 #15	Slc24a5 (ENSMOCG00000014049) #16	Sema6d (ENSMOCG00000022881) #17	ENSMOCG00000022725 #18	ENSMOCG00000019232	Bloc1s6 (ENSMOCG00000011404) #19	Slc30a4 (ENSMOCG00000001105) #20	AA467197 (ENSMOCG00000011759) #21	Spata5l1 (ENSMOCG00000018887)	Gatm (ENSMOCG00000013911) #22	ENSMOCG00000007140	Shf (ENSMOCG00000007839) #23	Duox1 (ENSMOCG00000017608) #24	Duoxa1 (ENSMOCG00000002434) #25	Duoxa2 (ENSMOCG00000017053) #26	Duox2 (ENSMOCG00000019172) #27	Sord (ENSMOCG00000020086) #28	ENSMOCG00000008799	Terb2 (ENSMOCG00000015731) #29	Trim69 (ENSMOCG00000008858) #30	B2m (ENSMOCG00000000289) #31	Patl2 (ENSMOCG00000015367) #32	Spg11 (ENSMOCG00000010865) #33	ENSMOCG00000022505 #34	Ctdspl2 (ENSMOCG00000013493) #36
Northern American deer mouse	MODERN SPECIES	17	Cep152 (ENSPEMG00000005457) #9	ENSPEMG00000029696 #11	Dut (ENSPEMG00000030951) #12	Slc12a1 (ENSPEMG00000008530) #13	Ctxn2 (ENSPEMG00000000448) #14	ENSPEMG00000006286 #15	Slc24a5 (ENSPEMG00000008978) #16	Sema6d (ENSPEMG00000019804) #17	ENSPEMG00000029798	Sqor (ENSPEMG00000019516) #18	Bloc1s6 (ENSPEMG00000019452) #19	Slc30a4 (ENSPEMG00000019620) #20	AA467197 (ENSPEMG00000020057) #21	ENSPEMG00000028484	ENSPEMG00000028037	Gatm (ENSPEMG00000019330) #22	ENSPEMG00000000442	Shf (ENSPEMG00000023166) #23	Duox1 (ENSPEMG00000015205) #24	Duoxa1 (ENSPEMG00000009620) #25	Duoxa2 (ENSPEMG00000012396) #26	Duox2 (ENSPEMG00000015955) #27	Sord (ENSPEMG00000011334) #28	Terb2 (ENSPEMG00000009561) #29	Trim69 (ENSPEMG00000013977) #30	B2m (ENSPEMG00000011405) #31	Patl2 (ENSPEMG00000016509) #32	Spg11 (ENSPEMG00000018443) #33	ENSPEMG00000029980 #34	Ctdspl2 (ENSPEMG00000010867) #36	Golm2 (ENSPEMG00000012792) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	485					Fbxw17 (ENSNGAG00000010163)	Slc12a1 (ENSNGAG00000019829) #13	Ctxn2 (ENSNGAG00000017667) #14	ENSNGAG00000010756 #15	Slc24a5 (ENSNGAG00000000925) #16	Sema6d (ENSNGAG00000008187) #17	Sqor (ENSNGAG00000016277) #18	Bloc1s6 (ENSNGAG00000000881) #19	Slc30a4 (ENSNGAG00000019503) #20	AA467197 (ENSNGAG00000019050) #21	ENSNGAG00000018215	Gatm (ENSNGAG00000020438) #22	ENSNGAG00000019081	ENSNGAG00000016110	Shf (ENSNGAG00000014190) #23	Duox1 (ENSNGAG00000020793) #24	Duoxa1 (ENSNGAG00000001141) #25	Duoxa2 (ENSNGAG00000010918) #26	Duox2 (ENSNGAG00000014762) #27	Sord (ENSNGAG00000011504) #28	Terb2 (ENSNGAG00000000628) #29	Trim69 (ENSNGAG00000017042) #30	ENSNGAG00000013079	B2m (ENSNGAG00000011440) #31	Patl2 (ENSNGAG00000020368) #32	Spg11 (ENSNGAG00000006405) #33	ENSNGAG00000017917 #34
Lesser Egyptian jerboa	MODERN SPECIES	79	ENSJJAG00000024039	Mpped2 (ENSJJAG00000003402)	Fshb (ENSJJAG00000011959)	Kcna4 (ENSJJAG00000017398)	ENSJJAG00000017907	Mettl15 (ENSJJAG00000019606)	Lgr4 (ENSJJAG00000019874)	ENSJJAG00000005395	Bbox1 (ENSJJAG00000010708)	Fibin (ENSJJAG00000012158)	Slc5a12 (ENSJJAG00000015003)	Ano3 (ENSJJAG00000021499)	Muc15 (ENSJJAG00000024050)	ENSJJAG00000014852	AA467197 (ENSJJAG00000015034) #21	Gatm (ENSJJAG00000000329) #22	ENSJJAG00000013917	Shf (ENSJJAG00000024265) #23	Duox1 (ENSJJAG00000014943) #24	Duoxa1 (ENSJJAG00000012397) #25	Duoxa2 (ENSJJAG00000018767) #26	ENSJJAG00000000265 #28	Terb2 (ENSJJAG00000017833) #29	Trim69 (ENSJJAG00000022679) #30	Spg11 (ENSJJAG00000015413) #33	ENSJJAG00000013170 #37	ENSJJAG00000017217	Frmd5 (ENSJJAG00000014174)	Wdr76 (ENSJJAG00000024151)	ENSJJAG00000014416	ENSJJAG00000010647
Kangaroo rat	MODERN SPECIES	330	Cops2 (ENSDORG00000006941)	Secisbp2l (ENSDORG00000008662)	ENSDORG00000030215	ENSDORG00000010573 #8	ENSDORG00000010570 #9	Fbn1 (ENSDORG00000010561) #11	ENSDORG00000010560 #12	Slc12a1 (ENSDORG00000010558) #13	ENSDORG00000015835 #15	Slc24a5 (ENSDORG00000015834) #16	Sema6d (ENSDORG00000000896) #17	ENSDORG00000026845	Sqor (ENSDORG00000011465) #18	Bloc1s6 (ENSDORG00000024796) #19	Slc30a4 (ENSDORG00000028460) #20	Gatm (ENSDORG00000009786) #22	ENSDORG00000016196	Shf (ENSDORG00000015296) #23	Duox1 (ENSDORG00000015290) #24	Duoxa1 (ENSDORG00000015289) #25	Duoxa2 (ENSDORG00000024063) #26	Duox2 (ENSDORG00000011040) #27	Sord (ENSDORG00000011039) #28	Terb2 (ENSDORG00000002002) #29	ENSDORG00000029129 #30	ENSDORG00000030028	Patl2 (ENSDORG00000026649) #32	Spg11 (ENSDORG00000008343) #33	ENSDORG00000008339 #34	Ctdspl2 (ENSDORG00000005704) #36	Golm2 (ENSDORG00000008498) #37
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Sciuridae	ANCESTRAL SPECIES	11	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397.p #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Marmotini	ANCESTRAL SPECIES	9	ENSGT00950000182870.a.b #8	ENSGT00940000154796.A #7	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397.p #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00390000012976.c.b.a	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36
Marmotini_b	ANCESTRAL SPECIES	4	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390.xb.b #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397.p #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00390000012976.c.b.a	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36
Squirrel	MODERN SPECIES	71	SHC4 (ENSSTOG00000003069) #8	CEP152 (ENSSTOG00000003043) #9	FBN1 (ENSSTOG00000007824) #11	ENSSTOG00000007811 #12	SLC12A1 (ENSSTOG00000007768) #13	CTXN2 (ENSSTOG00000023277) #14	MYEF2 (ENSSTOG00000007740) #15	SLC24A5 (ENSSTOG00000007727) #16	SEMA6D (ENSSTOG00000015296) #17	ENSSTOG00000025343 #12	SQOR (ENSSTOG00000005093) #18	BLOC1S6 (ENSSTOG00000001615) #19	SLC30A4 (ENSSTOG00000001606) #20	C15orf48 (ENSSTOG00000021929) #21	SPATA5L1 (ENSSTOG00000028609)	GATM (ENSSTOG00000012180) #22	SLC28A2 (ENSSTOG00000012167)	SHF (ENSSTOG00000026488) #23	DUOX1 (ENSSTOG00000008816) #24	DUOXA1 (ENSSTOG00000008792) #25	DUOXA2 (ENSSTOG00000008782) #26	DUOX2 (ENSSTOG00000008727) #27	SORD (ENSSTOG00000008709) #28	TERB2 (ENSSTOG00000013661) #29	ENSSTOG00000033780	TRIM69 (ENSSTOG00000002274) #30	B2M (ENSSTOG00000032330) #31	PATL2 (ENSSTOG00000033848) #32	ENSSTOG00000002225 #33	EIF3J (ENSSTOG00000025483) #34	CTDSPL2 (ENSSTOG00000002215) #36
Arctic ground squirrel	MODERN SPECIES	4	SHC4 (ENSUPAG00010008562) #8	EID1 (ENSUPAG00010008597) #7	CEP152 (ENSUPAG00010008621) #9	FBN1 (ENSUPAG00010008765) #11	ENSUPAG00010008861 #12	SLC12A1 (ENSUPAG00010008880) #13	CTXN2 (ENSUPAG00010009280) #14	MYEF2 (ENSUPAG00010009284) #15	SLC24A5 (ENSUPAG00010009513) #16	SEMA6D (ENSUPAG00010009526) #17	SQOR (ENSUPAG00010009674) #18	BLOC1S6 (ENSUPAG00010009684) #19	SLC30A4 (ENSUPAG00010009697) #20	C15orf48 (ENSUPAG00010009717) #21	SPATA5L1 (ENSUPAG00010009731)	GATM (ENSUPAG00010009746) #22	SLC28A2 (ENSUPAG00010009757)	SHF (ENSUPAG00010009782) #23	DUOX1 (ENSUPAG00010009803) #24	DUOXA1 (ENSUPAG00010009830) #25	DUOXA2 (ENSUPAG00010009876) #26	DUOX2 (ENSUPAG00010009883) #27	SORD (ENSUPAG00010009931) #28	TERB2 (ENSUPAG00010009958) #29	TRIM69 (ENSUPAG00010009970) #30	ENSUPAG00010009982	B2M (ENSUPAG00010009989) #31	PATL2 (ENSUPAG00010009997) #32	SPG11 (ENSUPAG00010010037) #33	EIF3J (ENSUPAG00010010111) #34	CTDSPL2 (ENSUPAG00010010125) #36
Alpin marmot	MODERN SPECIES	7	SHC4 (ENSMMMG00000016518) #8	EID1 (ENSMMMG00000016532) #7	ENSMMMG00000016537 #9	FBN1 (ENSMMMG00000016560) #11	ENSMMMG00000016659 #12	SLC12A1 (ENSMMMG00000016667) #13	CTXN2 (ENSMMMG00000016815) #14	ENSMMMG00000016819 #15	SLC24A5 (ENSMMMG00000016953) #16	SEMA6D (ENSMMMG00000016971) #17	SQOR (ENSMMMG00000017646) #18	BLOC1S6 (ENSMMMG00000017665) #19	SLC30A4 (ENSMMMG00000017672) #20	C15orf48 (ENSMMMG00000017695) #21	SPATA5L1 (ENSMMMG00000017707)	GATM (ENSMMMG00000017727) #22	SLC28A2 (ENSMMMG00000017753)	SHF (ENSMMMG00000017757) #23	DUOX1 (ENSMMMG00000017791) #24	DUOXA1 (ENSMMMG00000017815) #25	DUOXA2 (ENSMMMG00000017845) #26	DUOX2 (ENSMMMG00000017855) #27	SORD (ENSMMMG00000017888) #28	TERB2 (ENSMMMG00000017900) #29	TRIM69 (ENSMMMG00000017914) #30	ENSMMMG00000017923	B2M (ENSMMMG00000017935) #31	PATL2 (ENSMMMG00000017944) #32	SPG11 (ENSMMMG00000017966) #33	ENSMMMG00000017993 #34	CTDSPL2 (ENSMMMG00000018015) #36
Eurasian red squirrel	MODERN SPECIES	11	ENSSVLG00005001795	ENSSVLG00005001781	FBN1 (ENSSVLG00005001645) #11	ENSSVLG00005001592	ENSSVLG00005001505 #12	SLC12A1 (ENSSVLG00005001381) #13	CTXN2 (ENSSVLG00005001303) #14	MYEF2 (ENSSVLG00005001267) #15	SLC24A5 (ENSSVLG00005001196) #16	SEMA6D (ENSSVLG00005000952) #17	SQOR (ENSSVLG00005000806) #18	ENSSVLG00005000768 #19	SLC30A4 (ENSSVLG00005000746) #20	C15orf48 (ENSSVLG00005000724) #21	SPATA5L1 (ENSSVLG00005000694)	GATM (ENSSVLG00005000654) #22	SLC28A2 (ENSSVLG00005000606)	SHF (ENSSVLG00005000549) #23	DUOX1 (ENSSVLG00005000466) #24	DUOXA1 (ENSSVLG00005000409) #25	DUOXA2 (ENSSVLG00005000372) #26	DUOX2 (ENSSVLG00005000281) #27	SORD (ENSSVLG00005000220) #28	ENSSVLG00005000192	TERB2 (ENSSVLG00005000182) #29	TRIM69 (ENSSVLG00005005647) #30	B2M (ENSSVLG00005005583) #31	PATL2 (ENSSVLG00005005476) #32	ENSSVLG00005005441	SPG11 (ENSSVLG00005005365) #33	ENSSVLG00005005225 #34
Hystricomorpha	ANCESTRAL SPECIES	15	ENSGT00950000182870.a.b #8	ENSGT00940000154796.A #7	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT01010000222666	ENSGT00940000157224	ENSGT00730000111340	ENSGT00940000161456	ENSGT00390000002030	ENSGT00390000013481.c.a
Hystricomorpha_a	ANCESTRAL SPECIES	18	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00940000158652	ENSGT00940000157224	ENSGT00730000111340	ENSGT00940000161456	ENSGT00390000002030	ENSGT00390000013481.c.a
Hystricomorpha_b	ANCESTRAL SPECIES	18	ENSGT00950000182870.a.b #8	ENSGT00940000154796.A #7	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00940000158652	ENSGT00940000157224	ENSGT00730000111340	ENSGT00940000161456	ENSGT00390000002030	ENSGT00390000013481.c.a
Degu	MODERN SPECIES	146	ENSODEG00000007686	SECISBP2L (ENSODEG00000007846)	ENSODEG00000007930	ENSODEG00000007307 #8	CEP152 (ENSODEG00000008644) #9	FBN1 (ENSODEG00000007689) #11	ENSODEG00000008550 #12	SLC12A1 (ENSODEG00000009402) #13	MYEF2 (ENSODEG00000007463) #15	SLC24A5 (ENSODEG00000010497) #16	SEMA6D (ENSODEG00000007614) #17	SQOR (ENSODEG00000008455) #18	BLOC1S6 (ENSODEG00000007779) #19	SLC30A4 (ENSODEG00000007906) #20	C15orf48 (ENSODEG00000009386) #21	GATM (ENSODEG00000009765) #22	SLC28A2 (ENSODEG00000010816)	SHF (ENSODEG00000008606) #23	DUOX1 (ENSODEG00000008417) #24	DUOXA1 (ENSODEG00000008753) #25	DUOXA2 (ENSODEG00000009819) #26	DUOX2 (ENSODEG00000009257) #27	SORD (ENSODEG00000008350) #28	TERB2 (ENSODEG00000010250) #29	TRIM69 (ENSODEG00000010623) #30	ENSODEG00000008739	ENSODEG00000008942
Long-tailed chinchilla	MODERN SPECIES	116	SHC4 (ENSCLAG00000014691) #8	EID1 (ENSCLAG00000008705) #7	CEP152 (ENSCLAG00000012592) #9	FBN1 (ENSCLAG00000014723) #11	DUT (ENSCLAG00000011626) #12	SLC12A1 (ENSCLAG00000008362) #13	CTXN2 (ENSCLAG00000011672) #14	MYEF2 (ENSCLAG00000008328) #15	SLC24A5 (ENSCLAG00000009536) #16	SEMA6D (ENSCLAG00000010651) #17	SQOR (ENSCLAG00000015903) #18	BLOC1S6 (ENSCLAG00000015243) #19	SLC30A4 (ENSCLAG00000010503) #20	C15orf48 (ENSCLAG00000010562) #21	ENSCLAG00000008984	GATM (ENSCLAG00000012238) #22	SLC28A2 (ENSCLAG00000011544)	SHF (ENSCLAG00000009719) #23	DUOX1 (ENSCLAG00000011832) #24	DUOXA1 (ENSCLAG00000007621) #25	DUOXA2 (ENSCLAG00000009352) #26	DUOX2 (ENSCLAG00000009210) #27	SORD (ENSCLAG00000009127) #28	TERB2 (ENSCLAG00000012436) #29	TRIM69 (ENSCLAG00000013033) #30	DLGAP5 (ENSCLAG00000008776)	LGALS3 (ENSCLAG00000009650)	MAPK1IP1L (ENSCLAG00000009943)	SOCS4 (ENSCLAG00000010226)	ENSCLAG00000013863	GCH1 (ENSCLAG00000009462)
Guinea pig	MODERN SPECIES	23	ENSCPOG00000006525 #8	CEP152 (ENSCPOG00000006518) #9	FBN1 (ENSCPOG00000004298) #11	DUT (ENSCPOG00000024107) #12	SLC12A1 (ENSCPOG00000005122) #13	CTXN2 (ENSCPOG00000031158) #14	MYEF2 (ENSCPOG00000010584) #15	SLC24A5 (ENSCPOG00000010579) #16	SEMA6D (ENSCPOG00000006931) #17	ENSCPOG00000025021	SQOR (ENSCPOG00000021297) #18	BLOC1S6 (ENSCPOG00000037068) #19	SLC30A4 (ENSCPOG00000040539) #20	C15orf48 (ENSCPOG00000033924) #21	SPATA5L1 (ENSCPOG00000008384)	GATM (ENSCPOG00000007904) #22	SLC28A2 (ENSCPOG00000005300)	SHF (ENSCPOG00000027041) #23	DUOX1 (ENSCPOG00000007302) #24	ENSCPOG00000030849 #25	DUOXA2 (ENSCPOG00000005034) #26	DUOX2 (ENSCPOG00000007267) #27	SORD (ENSCPOG00000002241) #28	TERB2 (ENSCPOG00000009515) #29	TRIM69 (ENSCPOG00000025547) #30	DLGAP5 (ENSCPOG00000004807)	LGALS3 (ENSCPOG00000038163)	MAPK1IP1L (ENSCPOG00000003450)	SOCS4 (ENSCPOG00000003449)	WDHD1 (ENSCPOG00000003440)	GCH1 (ENSCPOG00000003585)
Naked mole-rat female	MODERN SPECIES	11	ENSHGLG00000037945	DUT (ENSHGLG00000011864) #12	SLC12A1 (ENSHGLG00000014401) #13	CTXN2 (ENSHGLG00000018257) #14	MYEF2 (ENSHGLG00000018166) #15	SLC24A5 (ENSHGLG00000013142) #16	ENSHGLG00000032184	SEMA6D (ENSHGLG00000009924) #17	ENSHGLG00000038651	ENSHGLG00000035166	SQOR (ENSHGLG00000018746) #18	BLOC1S6 (ENSHGLG00000019337) #19	SLC30A4 (ENSHGLG00000016667) #20	C15orf48 (ENSHGLG00000016670) #21	SPATA5L1 (ENSHGLG00000043333)	GATM (ENSHGLG00000019276) #22	SLC28A2 (ENSHGLG00000014172)	ENSHGLG00000012788 #23	DUOX1 (ENSHGLG00000014552) #24	ENSHGLG00000013326 #25	DUOXA2 (ENSHGLG00000019350) #26	DUOX2 (ENSHGLG00000010033) #27	ENSHGLG00000041547	ENSHGLG00000050443	SORD (ENSHGLG00000039417) #28	ENSHGLG00000014203 #29	ENSHGLG00000044277	ENSHGLG00000046252 #30	ENSHGLG00000036163	ENSHGLG00000014601	LGALS3 (ENSHGLG00000019099)
Lagomorpha	ANCESTRAL SPECIES	7	ENSGT00940000154796.A #7	ENSGT00950000182870.a.b #8	ENSGT00950000182870.b #9	ENSGT00950000183158.D.b.f #11	ENSGT00390000018390 #12	ENSGT00940000158030 #13	ENSGT00940000154412.B.b #14	ENSGT00940000157397 #15	ENSGT01030000234532.A.b #16	ENSGT00940000159303 #17	ENSGT00390000019406 #18	ENSGT00510000047812 #19	ENSGT00940000157545 #20	ENSGT00390000009277 #21	ENSGT00940000160700	ENSGT00390000011613 #22	ENSGT00390000016025.b.h	ENSGT00940000159452 #23	ENSGT00940000161792 #24	ENSGT00390000008240.m #25	ENSGT00390000008240.n #26	ENSGT00940000160291 #27	ENSGT00550000074781 #28	ENSGT00390000012336 #29	ENSGT00940000160707.b #30	ENSGT00690000102227 #31	ENSGT00520000055649.b #32	ENSGT00390000016791 #33	ENSGT00390000018400 #34	ENSGT01040000240503.A.a.a #36	ENSGT00530000063675.a #37
Pika	MODERN SPECIES	1525													SLC30A4 (ENSOPRG00000016505) #20	C15orf48 (ENSOPRG00000016494) #21	SPATA5L1 (ENSOPRG00000016466)	GATM (ENSOPRG00000016460) #22	SLC28A2 (ENSOPRG00000016432)
Rabbit	MODERN SPECIES	8	MYEF2 (ENSOCUG00000013043) #15	SLC24A5 (ENSOCUG00000013038) #16	ENSOCUG00000031757	ENSOCUG00000021707	SEMA6D (ENSOCUG00000007901) #17	ENSOCUG00000035692	ENSOCUG00000032462	ENSOCUG00000030558	SQOR (ENSOCUG00000014347) #18	BLOC1S6 (ENSOCUG00000017351) #19	ENSOCUG00000030326	SLC30A4 (ENSOCUG00000013313) #20	ENSOCUG00000037926	ENSOCUG00000029216 #21	SPATA5L1 (ENSOCUG00000011209)	GATM (ENSOCUG00000014352) #22	SLC28A2 (ENSOCUG00000014340)	ENSOCUG00000014332 #23	DUOX1 (ENSOCUG00000014307) #24	DUOXA1 (ENSOCUG00000014298) #25	DUOXA2 (ENSOCUG00000014290) #26	DUOX2 (ENSOCUG00000014255) #27	SORD (ENSOCUG00000014246) #28	TERB2 (ENSOCUG00000027500) #29	TRIM69 (ENSOCUG00000008683) #30	ENSOCUG00000031456	B2M (ENSOCUG00000017117) #31	PATL2 (ENSOCUG00000006339) #32	SPG11 (ENSOCUG00000006317) #33	EIF3J (ENSOCUG00000005376) #34	CTDSPL2 (ENSOCUG00000005366) #36
Tree shrew	MODERN SPECIES	1814														C15orf48 (ENSTBEG00000009212) #21	SPATA5L1 (ENSTBEG00000008955)	GATM (ENSTBEG00000008793) #22	SLC28A2 (ENSTBEG00000008224)