Vertebrata	ANCESTRAL SPECIES																	ENSGT00390000011613 #22
Gnathostomata	ANCESTRAL SPECIES	120		ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000159842	ENSGT00940000158245	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000157947	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Euteleostomi	ANCESTRAL SPECIES	6	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000166711	ENSGT00520000055647.b	ENSGT00940000160462	ENSGT00940000158710	ENSGT00390000010440	ENSGT00940000177451	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000168316	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d
Sarcopterygii	ANCESTRAL SPECIES	9	ENSGT00940000160101	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00390000010440	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000168316	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d
Tetrapoda	ANCESTRAL SPECIES	11	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Amniota	ANCESTRAL SPECIES	15	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Mammalia	ANCESTRAL SPECIES	45				ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184	ENSGT00940000166403
Theria	ANCESTRAL SPECIES	24											ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Eutheria	ANCESTRAL SPECIES	8	ENSGT00490000043356.a	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Boreoeutheria	ANCESTRAL SPECIES	3	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Euarchontoglires	ANCESTRAL SPECIES	3	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Primates	ANCESTRAL SPECIES	2	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Haplorrhini	ANCESTRAL SPECIES	17	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Simiiformes	ANCESTRAL SPECIES	2	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.cb #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Catarrhini	ANCESTRAL SPECIES	20	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.cb #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a.c
Cercopithecidae	ANCESTRAL SPECIES	21	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00910000147356	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00940000153773.a.b.a.b	ENSGT01090000260040.a.a.b.u	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.cb #36
Cercopithecinae	ANCESTRAL SPECIES	2	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00910000147356	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT01090000260040.a.a.b.u	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.cb #36	ENSGT01040000240503.A.a.a #37
Cercopithecinae_a	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00910000147356	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.cb #36	ENSGT01040000240503.A.a.a #37	ENSGT00950000182878.b.a.c.a.a.a.a.c.a ##13
Macaca	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc.m.b #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00910000147356	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791.m.a ##35	ENSGT00390000018400.cb #36	ENSGT01040000240503.A.a.a #37	ENSGT00950000182878.b.a.c.a.a.a.a.c.a ##13
Macaca_a	ANCESTRAL SPECIES	2	ENSGT00490000043356.a	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc.m.b #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791.m.a ##35	ENSGT00390000016791.n #35	ENSGT00390000018400.cb #36	ENSGT01040000240503.A.a.a #37
Rhesus	MODERN SPECIES	17	FBN1 (ENSMMUG00000004239) #7	ENSMMUG00000016898 #8	SLC12A1 (ENSMMUG00000016896) #9	CTXN2 (ENSMMUG00000043753) #10	MYEF2 (ENSMMUG00000018834) #11	SLC24A5 (ENSMMUG00000018831) #12	ENSMMUG00000016097 #13	SEMA6D (ENSMMUG00000012144) #14	ENSMMUG00000056847 #15	ENSMMUG00000052233 #16	SQOR (ENSMMUG00000015749) #17	BLOC1S6 (ENSMMUG00000004449) #18	SLC30A4 (ENSMMUG00000011510) #19	C15orf48 (ENSMMUG00000044497) #20	SPATA5L1 (ENSMMUG00000005858) #21	GATM (ENSMMUG00000005856) #22	SLC28A2 (ENSMMUG00000001284) #23	SHF (ENSMMUG00000008757) #24	DUOX1 (ENSMMUG00000008752) #25	DUOXA1 (ENSMMUG00000008748) #26	DUOXA2 (ENSMMUG00000008747) #27	DUOX2 (ENSMMUG00000008746) #28	SORD (ENSMMUG00000015971) #29	TERB2 (ENSMMUG00000049868) #30	TRIM69 (ENSMMUG00000020899) #31	ENSMMUG00000052614 #32	B2M (ENSMMUG00000060797) #33	PATL2 (ENSMMUG00000014294) #34	SPG11 (ENSMMUG00000014291) #35	EIF3J (ENSMMUG00000014288) #36	CTDSPL2 (ENSMMUG00000016742) #37
Crab-eating macaque	MODERN SPECIES	17	SHC4 (ENSMFAG00000038568)	CEP152 (ENSMFAG00000040377)	FBN1 (ENSMFAG00000041075) #7	DUT (ENSMFAG00000037325) #8	SLC12A1 (ENSMFAG00000031713) #9	CTXN2 (ENSMFAG00000065829) #10	MYEF2 (ENSMFAG00000046361) #11	SLC24A5 (ENSMFAG00000033428) #12	ENSMFAG00000048453	SEMA6D (ENSMFAG00000046214) #14	SQOR (ENSMFAG00000039151) #17	BLOC1S6 (ENSMFAG00000034141) #18	SLC30A4 (ENSMFAG00000034326) #19	ENSMFAG00000030902 #20	SPATA5L1 (ENSMFAG00000003414) #21	GATM (ENSMFAG00000003046) #22	ENSMFAG00000061464	ENSMFAG00000048704	SLC28A2 (ENSMFAG00000019210) #23	ENSMFAG00000045114 #24	DUOX1 (ENSMFAG00000043773) #25	DUOXA1 (ENSMFAG00000033232) #26	DUOXA2 (ENSMFAG00000032593) #27	DUOX2 (ENSMFAG00000029863) #28	SORD (ENSMFAG00000022177) #29	TERB2 (ENSMFAG00000046371) #30	TRIM69 (ENSMFAG00000033970) #31	B2M (ENSMFAG00000034244) #33	PATL2 (ENSMFAG00000003565) #34	ENSMFAG00000055129 ##35	ENSMFAG00000052492
Pig-tailed macaque	MODERN SPECIES	77	SHC4 (ENSMNEG00000035410)	CEP152 (ENSMNEG00000033405)	FBN1 (ENSMNEG00000031686) #7	ENSMNEG00000041908 #8	SLC12A1 (ENSMNEG00000025405) #9	CTXN2 (ENSMNEG00000021715) #10	MYEF2 (ENSMNEG00000028845) #11	SLC24A5 (ENSMNEG00000031270) #12	SEMA6D (ENSMNEG00000035871) #14	SQOR (ENSMNEG00000042129) #17	ENSMNEG00000026768	BLOC1S6 (ENSMNEG00000028439) #18	SLC30A4 (ENSMNEG00000029525) #19	ENSMNEG00000035863 #20	SPATA5L1 (ENSMNEG00000006184) #21	GATM (ENSMNEG00000030388) #22	SLC28A2 (ENSMNEG00000045249) #23	SHF (ENSMNEG00000041216) #24	DUOX1 (ENSMNEG00000037599) #25	DUOXA1 (ENSMNEG00000042643) #26	DUOXA2 (ENSMNEG00000044433) #27	DUOX2 (ENSMNEG00000036012) #28	SORD (ENSMNEG00000007912) #29	ENSMNEG00000038118	TERB2 (ENSMNEG00000005578) #30	TRIM69 (ENSMNEG00000026673) #31	B2M (ENSMNEG00000007682) #33	PATL2 (ENSMNEG00000034510) #34	SPG11 (ENSMNEG00000037610) ##35	EIF3J (ENSMNEG00000022347) #36	CTDSPL2 (ENSMNEG00000021961) #37
Cercopithecinae_b	ANCESTRAL SPECIES	30	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00940000164915.a	ENSGT00390000019406 #17	ENSGT00910000147356	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.cb #36	ENSGT01040000240503.A.a.a #37	ENSGT00950000182878.b.a.c.a.a.a.a.c.a ##13
Cercopithecinae_d	ANCESTRAL SPECIES	100	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00950000182895.a.a.a.a.a.a.b.a.b.b.a.b	ENSGT00940000164915.a	ENSGT00390000019406 #17	ENSGT00910000147356	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.cb #36	ENSGT01040000240503.A.a.a #37	ENSGT00950000182878.b.a.c.a.a.a.a.c.a ##13	ENSGT00530000063675.a.c
Sooty mangabey	MODERN SPECIES	130	FBN1 (ENSCATG00000019781) #7	ENSCATG00000038736 #8	SLC12A1 (ENSCATG00000041847) #9	CTXN2 (ENSCATG00000019704) #10	MYEF2 (ENSCATG00000039268) #11	SLC24A5 (ENSCATG00000041136) #12	SEMA6D (ENSCATG00000039652) #14	ENSCATG00000038489	ENSCATG00000021652	SQOR (ENSCATG00000036772) #17	ENSCATG00000005595	BLOC1S6 (ENSCATG00000040072) #18	SLC30A4 (ENSCATG00000031840) #19	ENSCATG00000037581 #20	SPATA5L1 (ENSCATG00000033763) #21	GATM (ENSCATG00000011938) #22	SHF (ENSCATG00000035533) #24	DUOX1 (ENSCATG00000038120) #25	DUOXA1 (ENSCATG00000044890) #26	DUOXA2 (ENSCATG00000035189) #27	DUOX2 (ENSCATG00000039528) #28	ENSCATG00000013184	SORD (ENSCATG00000040485) #29	TERB2 (ENSCATG00000034792) #30	TRIM69 (ENSCATG00000017577) #31	B2M (ENSCATG00000030567) #33	PATL2 (ENSCATG00000034794) #34	SPG11 (ENSCATG00000020504) #35	EIF3J (ENSCATG00000033376) #36	ENSCATG00000030268 ##13	CTDSPL2 (ENSCATG00000030959) #37
Drill	MODERN SPECIES	1075										SQOR (ENSMLEG00000044063) #17	ENSMLEG00000007384	BLOC1S6 (ENSMLEG00000041160) #18	SLC30A4 (ENSMLEG00000040428) #19	ENSMLEG00000038177 #20	SPATA5L1 (ENSMLEG00000043736) #21	GATM (ENSMLEG00000011043) #22	SHF (ENSMLEG00000029833) #24	DUOX1 (ENSMLEG00000029965) #25	DUOXA1 (ENSMLEG00000028100) #26	DUOXA2 (ENSMLEG00000034873) #27	DUOX2 (ENSMLEG00000037993) #28	SORD (ENSMLEG00000038337) #29	TERB2 (ENSMLEG00000034512) #30	TRIM69 (ENSMLEG00000036970) #31	B2M (ENSMLEG00000029483) #33	PATL2 (ENSMLEG00000042248) #34	SPG11 (ENSMLEG00000035781) #35	EIF3J (ENSMLEG00000040280) #36	ENSMLEG00000034555 ##13	CTDSPL2 (ENSMLEG00000041501) #37	GOLM2 (ENSMLEG00000032894)
Olive baboon	MODERN SPECIES	17	ENSPANG00000041088	ENSPANG00000017747 #8	ENSPANG00000017746 #9	ENSPANG00000017757 #11	ENSPANG00000031351 #12	ENSPANG00000017755 #14	ENSPANG00000041118	ENSPANG00000048690 ##15	ENSPANG00000037226	ENSPANG00000040496	SQOR (ENSPANG00000017769) #17	BLOC1S6 (ENSPANG00000017767) #18	SLC30A4 (ENSPANG00000017823) #19	ENSPANG00000017822 #20	SPATA5L1 (ENSPANG00000033678) #21	GATM (ENSPANG00000017833) #22	SLC28A2 (ENSPANG00000017836) #23	SHF (ENSPANG00000017835) #24	DUOX1 (ENSPANG00000017834) #25	DUOXA1 (ENSPANG00000017916) #26	DUOXA2 (ENSPANG00000017915) #27	DUOX2 (ENSPANG00000017925) #28	SORD (ENSPANG00000017924) #29	TERB2 (ENSPANG00000006767) #30	B2M (ENSPANG00000018027) #33	TRIM69 (ENSPANG00000017923) #31	PATL2 (ENSPANG00000018026) #34	SPG11 (ENSPANG00000018025) #35	EIF3J (ENSPANG00000018029) #36	CTDSPL2 (ENSPANG00000018028) #37	GOLM2 (ENSPANG00000018064)
Vervet Monkey	MODERN SPECIES	18	FBN1 (ENSCSAG00000010524) #7	DUT (ENSCSAG00000010486) #8	SLC12A1 (ENSCSAG00000010449) #9	CTXN2 (ENSCSAG00000019746) #10	MYEF2 (ENSCSAG00000010366) #11	SLC24A5 (ENSCSAG00000010355) #12	SEMA6D (ENSCSAG00000010345) #14	ENSCSAG00000019747	SQOR (ENSCSAG00000010332) #17	BLOC1S6 (ENSCSAG00000010324) #18	ENSCSAG00000010315	ENSCSAG00000010306	SLC30A4 (ENSCSAG00000010298) #19	C15orf48 (ENSCSAG00000010290) #20	SPATA5L1 (ENSCSAG00000010282) #21	GATM (ENSCSAG00000010274) #22	ENSCSAG00000019748	SHF (ENSCSAG00000010264) #24	DUOX1 (ENSCSAG00000010204) #25	DUOXA1 (ENSCSAG00000009979) #26	DUOXA2 (ENSCSAG00000009952) #27	DUOX2 (ENSCSAG00000009867) #28	SORD (ENSCSAG00000009647) #29	TERB2 (ENSCSAG00000009639) #30	TRIM69 (ENSCSAG00000009629) #31	B2M (ENSCSAG00000009613) #33	PATL2 (ENSCSAG00000009601) #34	CTDSPL2 (ENSCSAG00000009580) #37	GOLM2 (ENSCSAG00000009572)	FRMD5 (ENSCSAG00000009559)	WDR76 (ENSCSAG00000009507)
Rhinopithecus	ANCESTRAL SPECIES	278					ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00910000147356	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30
Black snub-nosed monkey	MODERN SPECIES	431	DUT (ENSRBIG00000022908) #8	SLC12A1 (ENSRBIG00000032330) #9	CTXN2 (ENSRBIG00000027305) #10	MYEF2 (ENSRBIG00000037503) #11	SLC24A5 (ENSRBIG00000035384) #12	SEMA6D (ENSRBIG00000044260) #14	ENSRBIG00000030189	ENSRBIG00000016675	SQOR (ENSRBIG00000027944) #17	ENSRBIG00000029531	BLOC1S6 (ENSRBIG00000030456) #18	ENSRBIG00000039148	SLC30A4 (ENSRBIG00000037551) #19	ENSRBIG00000044664 #20	SPATA5L1 (ENSRBIG00000044670) #21	GATM (ENSRBIG00000044687) #22	SLC28A2 (ENSRBIG00000009833) #23	SHF (ENSRBIG00000042047) #24	DUOX1 (ENSRBIG00000032046) #25	DUOXA1 (ENSRBIG00000039914) #26	DUOXA2 (ENSRBIG00000041760) #27	DUOX2 (ENSRBIG00000008925) #28	SORD (ENSRBIG00000032673) #29	ENSRBIG00000040064	TERB2 (ENSRBIG00000032763) #30
Golden snub-nosed monkey	MODERN SPECIES	2792													SLC30A4 (ENSRROG00000035169) #19	ENSRROG00000012837 #20	SPATA5L1 (ENSRROG00000028264) #21	GATM (ENSRROG00000031038) #22	SLC28A2 (ENSRROG00000039376) #23	SHF (ENSRROG00000028661) #24	DUOX1 (ENSRROG00000033297) #25	DUOXA1 (ENSRROG00000036353) #26	DUOXA2 (ENSRROG00000028792) #27	DUOX2 (ENSRROG00000044715) #28	ENSRROG00000033551	SORD (ENSRROG00000027997) #29	TERB2 (ENSRROG00000043785) #30
Hominoidea	ANCESTRAL SPECIES	20	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781.m.a #29	ENSGT00390000012336 #30	ENSGT00550000074781.m.b #29	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.cb #36	ENSGT01040000240503.A.a.a #37
Hominidae	ANCESTRAL SPECIES	22	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781.m.a #29	ENSGT00390000012336 #30	ENSGT00550000074781.m.b #29	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.cb #36	ENSGT01040000240503.A.a.a #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	22	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781.m.a #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.cb #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a.c
Gorilla	MODERN SPECIES	6	CEP152 (ENSGGOG00000000404)	ENSGGOG00000037122	FBN1 (ENSGGOG00000003292) #7	ENSGGOG00000005658 #8	SLC12A1 (ENSGGOG00000000757) #9	CTXN2 (ENSGGOG00000024403) #10	MYEF2 (ENSGGOG00000014968) #11	SLC24A5 (ENSGGOG00000015163) #12	ENSGGOG00000023680	SEMA6D (ENSGGOG00000016555) #14	SQOR (ENSGGOG00000006235) #17	BLOC1S6 (ENSGGOG00000013892) #18	SLC30A4 (ENSGGOG00000015394) #19	ENSGGOG00000026815 #20	SPATA5L1 (ENSGGOG00000028274) #21	GATM (ENSGGOG00000010939) #22	SLC28A2 (ENSGGOG00000001151) #23	ENSGGOG00000012356 #24	DUOX1 (ENSGGOG00000012320) #25	ENSGGOG00000011725 #26	DUOXA2 (ENSGGOG00000011720) #27	DUOX2 (ENSGGOG00000011693) #28	ENSGGOG00000026415 #29	TERB2 (ENSGGOG00000024649) #30	ENSGGOG00000017185 #29	TRIM69 (ENSGGOG00000026083) #31	B2M (ENSGGOG00000001602) #33	PATL2 (ENSGGOG00000025923) #34	SPG11 (ENSGGOG00000011834) #35	EIF3J (ENSGGOG00000000548) #36	CTDSPL2 (ENSGGOG00000007377) #37
Homo/Pan group	ANCESTRAL SPECIES	21	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781.m.a #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.cb #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a.c
Human	MODERN SPECIES	6	SHC4 (ENSG00000185634)	CEP152 (ENSG00000103995)	FBN1 (ENSG00000166147) #7	DUT (ENSG00000128951) #8	SLC12A1 (ENSG00000074803) #9	CTXN2 (ENSG00000233932) #10	MYEF2 (ENSG00000104177) #11	SLC24A5 (ENSG00000188467) #12	SEMA6D (ENSG00000137872) #14	SQOR (ENSG00000137767) #17	ENSG00000260170	BLOC1S6 (ENSG00000104164) #18	SLC30A4 (ENSG00000104154) #19	C15orf48 (ENSG00000166920) #20	SPATA5L1 (ENSG00000171763) #21	GATM (ENSG00000171766) #22	SLC28A2 (ENSG00000137860) #23	SHF (ENSG00000138606) #24	DUOX1 (ENSG00000137857) #25	DUOXA1 (ENSG00000140254) #26	DUOXA2 (ENSG00000140274) #27	DUOX2 (ENSG00000140279) #28	SORD (ENSG00000140263) #29	TERB2 (ENSG00000167014) #30	TRIM69 (ENSG00000185880) #31	B2M (ENSG00000166710) #33	PATL2 (ENSG00000229474) #34	SPG11 (ENSG00000104133) #35	EIF3J (ENSG00000104131) #36	CTDSPL2 (ENSG00000137770) #37	GOLM2 (ENSG00000166734)
Pan	ANCESTRAL SPECIES	20	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00940000153294.m.a.c.b.p	ENSGT00390000014818.i.b.a	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781.m.a #29	ENSGT00550000074781.m.b #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.cb #36	ENSGT01040000240503.A.a.a #37
Chimpanzee	MODERN SPECIES	6	ENSPTRG00000049195	FBN1 (ENSPTRG00000007046) #7	DUT (ENSPTRG00000007044) #8	SLC12A1 (ENSPTRG00000007043) #9	CTXN2 (ENSPTRG00000042182) #10	MYEF2 (ENSPTRG00000007042) #11	SLC24A5 (ENSPTRG00000007041) #12	ENSPTRG00000050173	ENSPTRG00000043448	SEMA6D (ENSPTRG00000007040) #14	SQOR (ENSPTRG00000007039) #17	BLOC1S6 (ENSPTRG00000007038) #18	SLC30A4 (ENSPTRG00000007036) #19	C15H15orf48 (ENSPTRG00000007035) #20	SPATA5L1 (ENSPTRG00000007034) #21	GATM (ENSPTRG00000007033) #22	SLC28A2 (ENSPTRG00000007031) #23	SHF (ENSPTRG00000007030) #24	DUOX1 (ENSPTRG00000007029) #25	DUOXA1 (ENSPTRG00000007028) #26	DUOXA2 (ENSPTRG00000007027) #27	DUOX2 (ENSPTRG00000007026) #28	SORD (ENSPTRG00000007025) #29	TRIM69 (ENSPTRG00000007022) #31	PATL2 (ENSPTRG00000041536) #34	SPG11 (ENSPTRG00000007016) #35	EIF3J (ENSPTRG00000051845) #36	CTDSPL2 (ENSPTRG00000007013) #37	GOLM2 (ENSPTRG00000007010)	ENSPTRG00000049283	FRMD5 (ENSPTRG00000007008)
Bonobo	MODERN SPECIES	6	SHC4 (ENSPPAG00000041946)	CEP152 (ENSPPAG00000040355)	FBN1 (ENSPPAG00000042323) #7	DUT (ENSPPAG00000029777) #8	SLC12A1 (ENSPPAG00000002733) #9	CTXN2 (ENSPPAG00000016328) #10	MYEF2 (ENSPPAG00000041556) #11	SLC24A5 (ENSPPAG00000041586) #12	ENSPPAG00000040924	SEMA6D (ENSPPAG00000030511) #14	SQOR (ENSPPAG00000044142) #17	BLOC1S6 (ENSPPAG00000001302) #18	SLC30A4 (ENSPPAG00000044143) #19	ENSPPAG00000044140 #20	SPATA5L1 (ENSPPAG00000044139) #21	GATM (ENSPPAG00000044131) #22	SLC28A2 (ENSPPAG00000039174) #23	ENSPPAG00000019951 #24	DUOX1 (ENSPPAG00000040927) #25	ENSPPAG00000029567 #26	DUOXA2 (ENSPPAG00000033072) #27	DUOX2 (ENSPPAG00000041951) #28	ENSPPAG00000010693 #29	ENSPPAG00000042707 #30	ENSPPAG00000028965 #30	TRIM69 (ENSPPAG00000041111) #31	B2M (ENSPPAG00000017343) #33	PATL2 (ENSPPAG00000007221) #34	SPG11 (ENSPPAG00000038585) #35	ENSPPAG00000043108 ##36	CTDSPL2 (ENSPPAG00000039837) #37
Orangutan	MODERN SPECIES	6	ENSPPYG00000032718	SHC4 (ENSPPYG00000006457)	CEP152 (ENSPPYG00000006456)	FBN1 (ENSPPYG00000006455) #7	ENSPPYG00000006454 #8	SLC12A1 (ENSPPYG00000006453) #9	CTXN2 (ENSPPYG00000035012) #10	MYEF2 (ENSPPYG00000006452) #11	SLC24A5 (ENSPPYG00000006451) #12	SEMA6D (ENSPPYG00000006450) #14	SQOR (ENSPPYG00000029570) #17	BLOC1S6 (ENSPPYG00000037996) #18	SLC30A4 (ENSPPYG00000006447) #19	ENSPPYG00000037114 #20	SPATA5L1 (ENSPPYG00000006445) #21	GATM (ENSPPYG00000006444) #22	SLC28A2 (ENSPPYG00000006443) #23	SHF (ENSPPYG00000006442) #24	DUOX1 (ENSPPYG00000006441) #25	DUOXA1 (ENSPPYG00000006440) #26	DUOXA2 (ENSPPYG00000006439) #27	DUOX2 (ENSPPYG00000006438) #28	SORD (ENSPPYG00000006437) #29	TERB2 (ENSPPYG00000032445) #30	ENSPPYG00000040076 #29	TRIM69 (ENSPPYG00000006434) #31	B2M (ENSPPYG00000006433) #33	PATL2 (ENSPPYG00000035995) #34	SPG11 (ENSPPYG00000006432) #35	EIF3J (ENSPPYG00000006431) #36	CTDSPL2 (ENSPPYG00000006429) #37
Gibbon	MODERN SPECIES	21	SHC4 (ENSNLEG00000006096)	CEP152 (ENSNLEG00000006071)	FBN1 (ENSNLEG00000006015) #7	DUT (ENSNLEG00000005996) #8	SLC12A1 (ENSNLEG00000005967) #9	CTXN2 (ENSNLEG00000018907) #10	MYEF2 (ENSNLEG00000005951) #11	SLC24A5 (ENSNLEG00000005941) #12	SEMA6D (ENSNLEG00000005898) #14	SQOR (ENSNLEG00000005894) #17	ENSNLEG00000033423	BLOC1S6 (ENSNLEG00000031938) #18	SLC30A4 (ENSNLEG00000005881) #19	ENSNLEG00000029050 #20	ENSNLEG00000005871 #21	GATM (ENSNLEG00000035933) #22	SLC28A2 (ENSNLEG00000005830) #23	ENSNLEG00000005822 #24	DUOX1 (ENSNLEG00000034823) #25	ENSNLEG00000005809 #26	DUOXA2 (ENSNLEG00000031072) #27	DUOX2 (ENSNLEG00000005749) #28	SORD (ENSNLEG00000005734) #29	TERB2 (ENSNLEG00000005727) #30	ENSNLEG00000028453 #29	TRIM69 (ENSNLEG00000005707) #31	B2M (ENSNLEG00000033377) #33	PATL2 (ENSNLEG00000005673) #34	SPG11 (ENSNLEG00000005591) #35	EIF3J (ENSNLEG00000005568) #36	CTDSPL2 (ENSNLEG00000005543) #37
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	27	ENSGT00490000043356.a	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc.q.b #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613.e #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.bb.a ##36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Cebidae	ANCESTRAL SPECIES	29	ENSGT00490000043356.a	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc.r #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613.e #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.bb.a.a ##36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Cebidae_a	ANCESTRAL SPECIES	52	ENSGT00490000043356.a	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.jc.r #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613.e #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400.bb.a.a ##36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Bolivian squirrel monkey	MODERN SPECIES	73	ENSSBOG00000036086	CEP152 (ENSSBOG00000031306)	FBN1 (ENSSBOG00000024272) #7	ENSSBOG00000034018 #8	SLC12A1 (ENSSBOG00000022213) #9	CTXN2 (ENSSBOG00000013318) #10	MYEF2 (ENSSBOG00000029634) #11	SLC24A5 (ENSSBOG00000023885) #12	ENSSBOG00000022686	SEMA6D (ENSSBOG00000028001) #14	SQOR (ENSSBOG00000027259) #17	BLOC1S6 (ENSSBOG00000030222) #18	SLC30A4 (ENSSBOG00000022298) #19	C15orf48 (ENSSBOG00000032988) #20	SPATA5L1 (ENSSBOG00000022681) #21	GATM (ENSSBOG00000032067) #22	SLC28A2 (ENSSBOG00000030328) #23	SHF (ENSSBOG00000026120) #24	DUOX1 (ENSSBOG00000035524) #25	DUOXA1 (ENSSBOG00000007091) #26	DUOXA2 (ENSSBOG00000032886) #27	DUOX2 (ENSSBOG00000020226) #28	SORD (ENSSBOG00000033398) #29	TERB2 (ENSSBOG00000036212) #30	TRIM69 (ENSSBOG00000025491) #31	B2M (ENSSBOG00000028380) #33	ENSSBOG00000033636	PATL2 (ENSSBOG00000034766) #34	SPG11 (ENSSBOG00000031896) #35	ENSSBOG00000035282 ##36	CTDSPL2 (ENSSBOG00000036246) #37
Capuchin	MODERN SPECIES	9	ENSCCAG00000000946	FBN1 (ENSCCAG00000025962) #7	DUT (ENSCCAG00000028726) #8	SLC12A1 (ENSCCAG00000028938) #9	CTXN2 (ENSCCAG00000020504) #10	MYEF2 (ENSCCAG00000033878) #11	SLC24A5 (ENSCCAG00000021714) #12	ENSCCAG00000023826	ENSCCAG00000028107	SEMA6D (ENSCCAG00000029426) #14	ENSCCAG00000037009 #17	BLOC1S6 (ENSCCAG00000036699) #18	SLC30A4 (ENSCCAG00000001193) #19	C15orf48 (ENSCCAG00000022789) #20	SPATA5L1 (ENSCCAG00000029452) #21	GATM (ENSCCAG00000031962) #22	SLC28A2 (ENSCCAG00000027848) #23	ENSCCAG00000031747	SHF (ENSCCAG00000037493) #24	DUOX1 (ENSCCAG00000032449) #25	DUOXA1 (ENSCCAG00000026858) #26	DUOXA2 (ENSCCAG00000024977) #27	DUOX2 (ENSCCAG00000034804) #28	SORD (ENSCCAG00000036842) #29	TERB2 (ENSCCAG00000030778) #30	TRIM69 (ENSCCAG00000022680) #31	B2M (ENSCCAG00000028100) #33	ENSCCAG00000028063	PATL2 (ENSCCAG00000025261) #34	SPG11 (ENSCCAG00000035886) #35	EIF3J (ENSCCAG00000028410) ##36
Marmoset	MODERN SPECIES	1	CEP152 (ENSCJAG00000001706)	FBN1 (ENSCJAG00000001735) #7	DUT (ENSCJAG00000001813) #8	SLC12A1 (ENSCJAG00000001821) #9	CTXN2 (ENSCJAG00000040189) #10	MYEF2 (ENSCJAG00000001875) #11	SLC24A5 (ENSCJAG00000001909) #12	SEMA6D (ENSCJAG00000001936) #14	ENSCJAG00000078916	ENSCJAG00000081901	SQOR (ENSCJAG00000002026) #17	BLOC1S6 (ENSCJAG00000002038) #18	SLC30A4 (ENSCJAG00000002049) #19	ENSCJAG00000071931 #20	SPATA5L1 (ENSCJAG00000002067) #21	GATM (ENSCJAG00000002080) #22	ENSCJAG00000086912	ENSCJAG00000076283	SLC28A2 (ENSCJAG00000002124) #23	ENSCJAG00000063604	SHF (ENSCJAG00000002159) #24	DUOX1 (ENSCJAG00000002197) #25	DUOXA1 (ENSCJAG00000002289) #26	DUOXA2 (ENSCJAG00000002302) #27	DUOX2 (ENSCJAG00000002307) #28	SORD (ENSCJAG00000002346) #29	ENSCJAG00000039561	TRIM69 (ENSCJAG00000002369) #31	B2M (ENSCJAG00000002377) #33	ENSCJAG00000064337 ##15	PATL2 (ENSCJAG00000002379) #34
Mas night monkey	MODERN SPECIES	664	ENSANAG00000029738	SHC4 (ENSANAG00000038494)	CEP152 (ENSANAG00000027445)	FBN1 (ENSANAG00000004803) #7	ENSANAG00000021483 #8	SLC12A1 (ENSANAG00000038497) #9	CTXN2 (ENSANAG00000012001) #10	MYEF2 (ENSANAG00000036558) #11	SLC24A5 (ENSANAG00000024361) #12	SEMA6D (ENSANAG00000021514) #14	SQOR (ENSANAG00000036530) #17	ENSANAG00000026700 #18	SLC30A4 (ENSANAG00000009735) #19	C15orf48 (ENSANAG00000022400) #20	SPATA5L1 (ENSANAG00000022791) #21	GATM (ENSANAG00000031836) #22	SLC28A2 (ENSANAG00000023299) #23	SHF (ENSANAG00000013917) #24	DUOX1 (ENSANAG00000026614) #25	DUOXA1 (ENSANAG00000022362) #26	DUOXA2 (ENSANAG00000000424) #27	DUOX2 (ENSANAG00000023067) #28	SORD (ENSANAG00000030942) #29	TERB2 (ENSANAG00000025429) #30	TRIM69 (ENSANAG00000035697) #31	B2M (ENSANAG00000032555) #33	ENSANAG00000030159	PATL2 (ENSANAG00000022701) #34	SPG11 (ENSANAG00000034005) #35	ENSANAG00000019682 ##36	CTDSPL2 (ENSANAG00000028613) #37
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00390000011613.f #22
Mas night monkey	MODERN SPECIES	193																ENSANAG00000015604 #22
Tarsier	MODERN SPECIES	5209														CUNH15orf48 (ENSTSYG00000002375) #20	SPATA5L1 (ENSTSYG00000000184) #21	GATM (ENSTSYG00000010492) #22	SLC28A2 (ENSTSYG00000003361) #23	SHF (ENSTSYG00000001698) #24	DUOX1 (ENSTSYG00000007798) #25	DUOXA1 (ENSTSYG00000013600) #26	DUOXA2 (ENSTSYG00000028517) #27	DUOX2 (ENSTSYG00000014125) #28
Strepsirrhini	ANCESTRAL SPECIES	2	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Lemuriformes	ANCESTRAL SPECIES	8	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406.f #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Mouse lemur	MODERN SPECIES	22	MAP2K1 (ENSMICG00000004393)	SNAPC5 (ENSMICG00000004401)	RPL4 (ENSMICG00000004419)	ZWILCH (ENSMICG00000004429)	LCTL (ENSMICG00000004455)	SMAD6 (ENSMICG00000035205)	SMAD3 (ENSMICG00000006119)	AAGAB (ENSMICG00000044554)	IQCH (ENSMICG00000006127)	ENSMICG00000041604	ENSMICG00000005597 #17	BLOC1S6 (ENSMICG00000005595) #18	SLC30A4 (ENSMICG00000005588) #19	C15orf48 (ENSMICG00000033332) #20	SPATA5L1 (ENSMICG00000035916) #21	GATM (ENSMICG00000005565) #22	ENSMICG00000032669	SLC28A2 (ENSMICG00000009242) #23	SHF (ENSMICG00000033037) #24	DUOX1 (ENSMICG00000009207) #25	DUOXA1 (ENSMICG00000009195) #26	DUOXA2 (ENSMICG00000048012) #27	DUOX2 (ENSMICG00000009164) #28	ENSMICG00000037145 #29	TRIM69 (ENSMICG00000007667) #31	B2M (ENSMICG00000005040) #33	PATL2 (ENSMICG00000005037) #34	SPG11 (ENSMICG00000005014) #35	ENSMICG00000005006 #36	CTDSPL2 (ENSMICG00000032422) #37	ENSMICG00000036371
Lemuriformes_a	ANCESTRAL SPECIES	1	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406.f #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Coquerels sifaka	MODERN SPECIES	424	SHC4 (ENSPCOG00000015169)	CEP152 (ENSPCOG00000027728)	FBN1 (ENSPCOG00000026107) #7	ENSPCOG00000018855 #8	SLC12A1 (ENSPCOG00000020544) #9	CTXN2 (ENSPCOG00000007859) #10	MYEF2 (ENSPCOG00000024570) #11	SLC24A5 (ENSPCOG00000024898) #12	SEMA6D (ENSPCOG00000016613) #14	ENSPCOG00000019176	ENSPCOG00000014606 #17	BLOC1S6 (ENSPCOG00000025749) #18	SLC30A4 (ENSPCOG00000028885) #19	C15orf48 (ENSPCOG00000028882) #20	SPATA5L1 (ENSPCOG00000028883) #21	GATM (ENSPCOG00000027557) #22	SLC28A2 (ENSPCOG00000025730) #23	SHF (ENSPCOG00000028513) #24	DUOX1 (ENSPCOG00000022246) #25	DUOXA1 (ENSPCOG00000026812) #26	DUOXA2 (ENSPCOG00000025495) #27	DUOX2 (ENSPCOG00000018972) #28	SORD (ENSPCOG00000023092) #29	TERB2 (ENSPCOG00000027938) #30	TRIM69 (ENSPCOG00000023254) #31	B2M (ENSPCOG00000023458) #33	PATL2 (ENSPCOG00000000295) #34	SPG11 (ENSPCOG00000017523) #35	EIF3J (ENSPCOG00000021934) #36	CTDSPL2 (ENSPCOG00000027804) #37	GOLM2 (ENSPCOG00000020622)
Greater bamboo lemur	MODERN SPECIES	205	EID1 (ENSPSMG00000021836)	SHC4 (ENSPSMG00000021831)	CEP152 (ENSPSMG00000021783)	FBN1 (ENSPSMG00000021704) #7	DUT (ENSPSMG00000021615) #8	SLC12A1 (ENSPSMG00000021467) #9	CTXN2 (ENSPSMG00000021313) #10	MYEF2 (ENSPSMG00000021272) #11	SLC24A5 (ENSPSMG00000021137) #12	SEMA6D (ENSPSMG00000020877) #14	SQOR (ENSPSMG00000020526) #17	BLOC1S6 (ENSPSMG00000020483) #18	SLC30A4 (ENSPSMG00000020465) #19	C15orf48 (ENSPSMG00000020452) #20	SPATA5L1 (ENSPSMG00000020446) #21	GATM (ENSPSMG00000020436) #22	SLC28A2 (ENSPSMG00000020416) #23	SHF (ENSPSMG00000020407) #24	DUOX1 (ENSPSMG00000020284) #25	DUOXA1 (ENSPSMG00000019986) #26	DUOXA2 (ENSPSMG00000019968) #27	DUOX2 (ENSPSMG00000019904) #28	SORD (ENSPSMG00000019696) #29	TERB2 (ENSPSMG00000019656) #30	TRIM69 (ENSPSMG00000019643) #31	ENSPSMG00000019616
Bushbaby	MODERN SPECIES	165											SQOR (ENSOGAG00000013707) #17	ENSOGAG00000013706 #18	SLC30A4 (ENSOGAG00000013703) #19	SPATA5L1 (ENSOGAG00000009471) #21	ENSOGAG00000029977	GATM (ENSOGAG00000009464) #22	SLC28A2 (ENSOGAG00000009453) #23	SHF (ENSOGAG00000012778) #24	DUOX1 (ENSOGAG00000003484) #25	DUOXA1 (ENSOGAG00000012771) #26	DUOXA2 (ENSOGAG00000012768) #27	DUOX2 (ENSOGAG00000012762) #28	SORD (ENSOGAG00000025959) #29	TERB2 (ENSOGAG00000000510) #30	TRIM69 (ENSOGAG00000006505) #31	B2M (ENSOGAG00000004711) #33	PATL2 (ENSOGAG00000004709) #34	SPG11 (ENSOGAG00000004699) #35	EIF3J (ENSOGAG00000004694) #36	CTDSPL2 (ENSOGAG00000004689) #37	ENSOGAG00000034831
Euarchontoglires_A	ANCESTRAL SPECIES	3	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Glires	ANCESTRAL SPECIES	15	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Rodentia	ANCESTRAL SPECIES	3	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Rodentia_B	ANCESTRAL SPECIES	11	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Myomorpha	ANCESTRAL SPECIES	33	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Chinese hamster chok1gshd	MODERN SPECIES	188	Eid1 (ENSCGRG00001010267)	Cep152 (ENSCGRG00001000747)	Fbn1 (ENSCGRG00001019162) #7	ENSCGRG00001010033 #8	Slc12a1 (ENSCGRG00001018507) #9	Ctxn2 (ENSCGRG00001010557) #10	ENSCGRG00001024080 #11	Slc24a5 (ENSCGRG00001014479) #12	Sema6d (ENSCGRG00001005980) #14	ENSCGRG00001010885	Sqor (ENSCGRG00001021599) #17	Bloc1s6 (ENSCGRG00001023580) #18	Slc30a4 (ENSCGRG00001015143) #19	AA467197 (ENSCGRG00001022257) #20	Spata5l1 (ENSCGRG00001022792) #21	Gatm (ENSCGRG00001021815) #22	ENSCGRG00001023496 #23	Shf (ENSCGRG00001024124) #24	Duox1 (ENSCGRG00001021686) #25	Duoxa1 (ENSCGRG00001023908) #26	Duoxa2 (ENSCGRG00001002266) #27	Duox2 (ENSCGRG00001024853) #28	Sord (ENSCGRG00001006100) #29	Terb2 (ENSCGRG00001009237) #30	Trim69 (ENSCGRG00001016620) #31	B2M (ENSCGRG00001018239) #33	Patl2 (ENSCGRG00001010801) #34	Spg11 (ENSCGRG00001011033) #35	ENSCGRG00001009334 #36	Ctdspl2 (ENSCGRG00001005065) #37	Golm2 (ENSCGRG00001015365)
Golden Hamster	MODERN SPECIES	631	ENSMAUG00000021022	Cep152 (ENSMAUG00000013711)	Fbn1 (ENSMAUG00000019785) #7	Dut (ENSMAUG00000000956) #8	Slc12a1 (ENSMAUG00000004531) #9	Ctxn2 (ENSMAUG00000008152) #10	ENSMAUG00000019642 #11	Slc24a5 (ENSMAUG00000010924) #12	ENSMAUG00000009790	Sema6d (ENSMAUG00000017126) #14	ENSMAUG00000009422 #17	Bloc1s6 (ENSMAUG00000013622) #18	Slc30a4 (ENSMAUG00000016970) #19	AA467197 (ENSMAUG00000008273) #20	Spata5l1 (ENSMAUG00000004328) #21	Gatm (ENSMAUG00000003375) #22	ENSMAUG00000004595 #23	Shf (ENSMAUG00000022235) #24	Duox1 (ENSMAUG00000021739) #25	Duoxa1 (ENSMAUG00000021016) #26	Duoxa2 (ENSMAUG00000019412) #27	Duox2 (ENSMAUG00000014703) #28	Sord (ENSMAUG00000001896) #29	B2m (ENSMAUG00000022234) #33	Patl2 (ENSMAUG00000001008) #34	Spg11 (ENSMAUG00000010225) #35	ENSMAUG00000019190 #36	Ctdspl2 (ENSMAUG00000015192) #37	Golm2 (ENSMAUG00000005066)	ENSMAUG00000000797	Frmd5 (ENSMAUG00000018567)
Cricetidae_B	ANCESTRAL SPECIES	4	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Prairie vole	MODERN SPECIES	81	Shc4 (ENSMOCG00000020474)	Cep152 (ENSMOCG00000016204)	Fbn1 (ENSMOCG00000016631) #7	Dut (ENSMOCG00000009765) #8	Slc12a1 (ENSMOCG00000017261) #9	Ctxn2 (ENSMOCG00000020162) #10	ENSMOCG00000006917 #11	Slc24a5 (ENSMOCG00000014049) #12	Sema6d (ENSMOCG00000022881) #14	ENSMOCG00000022725 #17	ENSMOCG00000019232	Bloc1s6 (ENSMOCG00000011404) #18	Slc30a4 (ENSMOCG00000001105) #19	AA467197 (ENSMOCG00000011759) #20	Spata5l1 (ENSMOCG00000018887) #21	Gatm (ENSMOCG00000013911) #22	ENSMOCG00000007140 #23	Shf (ENSMOCG00000007839) #24	Duox1 (ENSMOCG00000017608) #25	Duoxa1 (ENSMOCG00000002434) #26	Duoxa2 (ENSMOCG00000017053) #27	Duox2 (ENSMOCG00000019172) #28	Sord (ENSMOCG00000020086) #29	ENSMOCG00000008799	Terb2 (ENSMOCG00000015731) #30	Trim69 (ENSMOCG00000008858) #31	B2m (ENSMOCG00000000289) #33	Patl2 (ENSMOCG00000015367) #34	Spg11 (ENSMOCG00000010865) #35	ENSMOCG00000022505 #36	Ctdspl2 (ENSMOCG00000013493) #37
Northern American deer mouse	MODERN SPECIES	17	Cep152 (ENSPEMG00000005457)	ENSPEMG00000029696 #7	Dut (ENSPEMG00000030951) #8	Slc12a1 (ENSPEMG00000008530) #9	Ctxn2 (ENSPEMG00000000448) #10	ENSPEMG00000006286 #11	Slc24a5 (ENSPEMG00000008978) #12	Sema6d (ENSPEMG00000019804) #14	ENSPEMG00000029798	Sqor (ENSPEMG00000019516) #17	Bloc1s6 (ENSPEMG00000019452) #18	Slc30a4 (ENSPEMG00000019620) #19	AA467197 (ENSPEMG00000020057) #20	ENSPEMG00000028484 #21	ENSPEMG00000028037 #21	Gatm (ENSPEMG00000019330) #22	ENSPEMG00000000442 #23	Shf (ENSPEMG00000023166) #24	Duox1 (ENSPEMG00000015205) #25	Duoxa1 (ENSPEMG00000009620) #26	Duoxa2 (ENSPEMG00000012396) #27	Duox2 (ENSPEMG00000015955) #28	Sord (ENSPEMG00000011334) #29	Terb2 (ENSPEMG00000009561) #30	Trim69 (ENSPEMG00000013977) #31	B2m (ENSPEMG00000011405) #33	Patl2 (ENSPEMG00000016509) #34	Spg11 (ENSPEMG00000018443) #35	ENSPEMG00000029980 #36	Ctdspl2 (ENSPEMG00000010867) #37	Golm2 (ENSPEMG00000012792)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Mus	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00990000206984	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Mus_A	ANCESTRAL SPECIES		ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00990000206984	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Mus_B	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00990000206984	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397.s #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h.e.b #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a.m #37	ENSGT00530000063675.a
Mus_C	ANCESTRAL SPECIES		ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00990000206984	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397.s #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h.f #23	ENSGT00390000016025.b.h.e.a #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a.m #37
spretus	MODERN SPECIES	11	Shc4 (MGP_SPRETEiJ_G0025149)	Cep152 (MGP_SPRETEiJ_G0025148)	MGP_SPRETEiJ_G0025147	Fbn1 (MGP_SPRETEiJ_G0025146) #7	Dut (MGP_SPRETEiJ_G0025145) #8	Slc12a1 (MGP_SPRETEiJ_G0025144) #9	Ctxn2 (MGP_SPRETEiJ_G0025143) #10	MGP_SPRETEiJ_G0025142 #11	Myef2 (MGP_SPRETEiJ_G0025141) #11	Slc24a5 (MGP_SPRETEiJ_G0025140) #12	Sema6d (MGP_SPRETEiJ_G0025139) #14	Sqor (MGP_SPRETEiJ_G0025138) #17	Bloc1s6 (MGP_SPRETEiJ_G0025137) #18	Slc30a4 (MGP_SPRETEiJ_G0025136) #19	AA467197 (MGP_SPRETEiJ_G0025135) #20	Gatm (MGP_SPRETEiJ_G0025134) #22	Slc28a2 (MGP_SPRETEiJ_G0025133) #23	Slc28a2b (MGP_SPRETEiJ_G0025132) #23	Shf (MGP_SPRETEiJ_G0025131) #24	Duox1 (MGP_SPRETEiJ_G0025130) #25	Duoxa1 (MGP_SPRETEiJ_G0025129) #26	Duoxa2 (MGP_SPRETEiJ_G0025128) #27	Duox2 (MGP_SPRETEiJ_G0025127) #28	Sord (MGP_SPRETEiJ_G0025126) #29	Terb2 (MGP_SPRETEiJ_G0025125) #30	Trim69 (MGP_SPRETEiJ_G0025124) #31	B2m (MGP_SPRETEiJ_G0025123) #33	Patl2 (MGP_SPRETEiJ_G0025122) #34	Spg11 (MGP_SPRETEiJ_G0025121) #35	MGP_SPRETEiJ_G0025120 #36	Ctdspl2 (MGP_SPRETEiJ_G0025118) #37
Steppe mouse	MODERN SPECIES	2164											Sqor (ENSMSIG00000020464) #17	Bloc1s6 (ENSMSIG00000020442) #18	Slc30a4 (ENSMSIG00000020400) #19	AA467197 (ENSMSIG00000020373) #20	Spata5l1 (ENSMSIG00000020360) #21	Gatm (ENSMSIG00000020334) #22	ENSMSIG00000019812 #23
Mouse	MODERN SPECIES	11	Eid1 (ENSMUSG00000091337)	Shc4 (ENSMUSG00000035109)	Cep152 (ENSMUSG00000068394)	Fbn1 (ENSMUSG00000027204) #7	Dut (ENSMUSG00000027203) #8	Slc12a1 (ENSMUSG00000027202) #9	Ctxn2 (ENSMUSG00000074872) #10	Myef2 (ENSMUSG00000027201) #11	Slc24a5 (ENSMUSG00000035183) #12	Sema6d (ENSMUSG00000027200) #14	Sqor (ENSMUSG00000005803) #17	Bloc1s6 (ENSMUSG00000005804) #18	Slc30a4 (ENSMUSG00000005802) #19	AA467197 (ENSMUSG00000033213) #20	Spata5l1 (ENSMUSG00000118663) #21	Gatm (ENSMUSG00000027199) #22	Slc28a2b (ENSMUSG00000079071) #23	Slc28a2 (ENSMUSG00000027219) #23	Shf (ENSMUSG00000033256) #24	Duox1 (ENSMUSG00000033268) #25	Duoxa1 (ENSMUSG00000027224) #26	Duoxa2 (ENSMUSG00000027225) #27	Duox2 (ENSMUSG00000068452) #28	Sord (ENSMUSG00000027227) #29	Terb2 (ENSMUSG00000027229) #30	Trim69 (ENSMUSG00000033368) #31	B2m (ENSMUSG00000060802) #33	Patl2 (ENSMUSG00000027233) #34	Spg11 (ENSMUSG00000033396) #35	Eif3j1 (ENSMUSG00000027236) #36	Ctdspl2 (ENSMUSG00000033411) #37
Ryukyu mouse	MODERN SPECIES	11	Eid1 (MGP_CAROLIEiJ_G0024230)	Shc4 (MGP_CAROLIEiJ_G0024229)	Cep152 (MGP_CAROLIEiJ_G0024228)	MGP_CAROLIEiJ_G0024227	Fbn1 (MGP_CAROLIEiJ_G0024226) #7	Dut (MGP_CAROLIEiJ_G0024225) #8	Slc12a1 (MGP_CAROLIEiJ_G0024224) #9	Ctxn2 (MGP_CAROLIEiJ_G0024223) #10	MGP_CAROLIEiJ_G0024222 #11	Slc24a5 (MGP_CAROLIEiJ_G0024221) #12	Sema6d (MGP_CAROLIEiJ_G0024220) #14	Sqor (MGP_CAROLIEiJ_G0024219) #17	Bloc1s6 (MGP_CAROLIEiJ_G0024218) #18	Slc30a4 (MGP_CAROLIEiJ_G0024217) #19	AA467197 (MGP_CAROLIEiJ_G0024216) #20	Gatm (MGP_CAROLIEiJ_G0024215) #22	Shf (MGP_CAROLIEiJ_G0024214) #24	Duox1 (MGP_CAROLIEiJ_G0024213) #25	Duoxa1 (MGP_CAROLIEiJ_G0024212) #26	Duoxa2 (MGP_CAROLIEiJ_G0024211) #27	Duox2 (MGP_CAROLIEiJ_G0024210) #28	Sord (MGP_CAROLIEiJ_G0024209) #29	Terb2 (MGP_CAROLIEiJ_G0024208) #30	Trim69 (MGP_CAROLIEiJ_G0024207) #31	B2m (MGP_CAROLIEiJ_G0024206) #33	Patl2 (MGP_CAROLIEiJ_G0024205) #34	MGP_CAROLIEiJ_G0024203 #35	MGP_CAROLIEiJ_G0024202 #36	MGP_CAROLIEiJ_G0024201 #36	Ctdspl2 (MGP_CAROLIEiJ_G0024200) #37	Golm2 (MGP_CAROLIEiJ_G0024199)
Shrew mouse	MODERN SPECIES	16	Shc4 (MGP_PahariEiJ_G0025675)	Cep152 (MGP_PahariEiJ_G0025674)	MGP_PahariEiJ_G0025673	Fbn1 (MGP_PahariEiJ_G0025672) #7	Dut (MGP_PahariEiJ_G0025671) #8	Slc12a1 (MGP_PahariEiJ_G0025670) #9	Ctxn2 (MGP_PahariEiJ_G0025669) #10	MGP_PahariEiJ_G0025668 #11	MGP_PahariEiJ_G0025667 #11	Slc24a5 (MGP_PahariEiJ_G0025666) #12	Sema6d (MGP_PahariEiJ_G0025665) #14	Sqor (MGP_PahariEiJ_G0025664) #17	Bloc1s6 (MGP_PahariEiJ_G0025663) #18	Slc30a4 (MGP_PahariEiJ_G0025662) #19	AA467197 (MGP_PahariEiJ_G0025661) #20	Gatm (MGP_PahariEiJ_G0025660) #22	MGP_PahariEiJ_G0025659 #23	MGP_PahariEiJ_G0025658 #23	Shf (MGP_PahariEiJ_G0025657) #24	Duox1 (MGP_PahariEiJ_G0025656) #25	Duoxa1 (MGP_PahariEiJ_G0025655) #26	Duoxa2 (MGP_PahariEiJ_G0025654) #27	Duox2 (MGP_PahariEiJ_G0025653) #28	Sord (MGP_PahariEiJ_G0025652) #29	Terb2 (MGP_PahariEiJ_G0025651) #30	Trim69 (MGP_PahariEiJ_G0025650) #31	B2m (MGP_PahariEiJ_G0025649) #33	Patl2 (MGP_PahariEiJ_G0025648) #34	Spg11 (MGP_PahariEiJ_G0025647) #35	MGP_PahariEiJ_G0025646 #36	MGP_PahariEiJ_G0025645 #36
Rat	MODERN SPECIES	13	LOC120101650 (ENSRNOG00000031585)	Cep152 (ENSRNOG00000065817)	Fbn1 (ENSRNOG00000007302) #7	Dut (ENSRNOG00000007221) #8	Rpl32-ps1 (ENSRNOG00000032605)	Slc12a1 (ENSRNOG00000005367) #9	Ctxn2 (ENSRNOG00000037146) #10	Myef2 (ENSRNOG00000005258) #11	Slc24a5 (ENSRNOG00000005158) #12	Sema6d (ENSRNOG00000004812) #14	ENSRNOG00000063280	ENSRNOG00000062726	Sqor (ENSRNOG00000000172) #17	Slc30a4 (ENSRNOG00000000170) #19	Spata5l1 (ENSRNOG00000000169) #21	Gatm (ENSRNOG00000000168) #22	Tra2b-ps3 (ENSRNOG00000051627)	LOC120101644 (ENSRNOG00000068036) #23	LOC120101643 (ENSRNOG00000066870) #23	Slc28a2 (ENSRNOG00000028668) #23	Shf (ENSRNOG00000028685) #24	Duox1 (ENSRNOG00000033348) #25	Duoxa1 (ENSRNOG00000018005) #26	Duoxa2 (ENSRNOG00000017805) #27	Duox2 (ENSRNOG00000017395) #28	AC112350.1 (ENSRNOG00000047508)	Sord (ENSRNOG00000017291) #29	Terb2 (ENSRNOG00000037178) #30	Trim69 (ENSRNOG00000017157) #31	B2m (ENSRNOG00000017123) #33	Patl2 (ENSRNOG00000017061) #34
Upper Galilee mountains blind mole rat	MODERN SPECIES	485					Fbxw17 (ENSNGAG00000010163)	Slc12a1 (ENSNGAG00000019829) #9	Ctxn2 (ENSNGAG00000017667) #10	ENSNGAG00000010756 #11	Slc24a5 (ENSNGAG00000000925) #12	Sema6d (ENSNGAG00000008187) #14	Sqor (ENSNGAG00000016277) #17	Bloc1s6 (ENSNGAG00000000881) #18	Slc30a4 (ENSNGAG00000019503) #19	AA467197 (ENSNGAG00000019050) #20	ENSNGAG00000018215 #21	Gatm (ENSNGAG00000020438) #22	ENSNGAG00000019081 #23	ENSNGAG00000016110	Shf (ENSNGAG00000014190) #24	Duox1 (ENSNGAG00000020793) #25	Duoxa1 (ENSNGAG00000001141) #26	Duoxa2 (ENSNGAG00000010918) #27	Duox2 (ENSNGAG00000014762) #28	Sord (ENSNGAG00000011504) #29	Terb2 (ENSNGAG00000000628) #30	Trim69 (ENSNGAG00000017042) #31	ENSNGAG00000013079	B2m (ENSNGAG00000011440) #33	Patl2 (ENSNGAG00000020368) #34	Spg11 (ENSNGAG00000006405) #35	ENSNGAG00000017917 #36
Lesser Egyptian jerboa	MODERN SPECIES	79	ENSJJAG00000024039	Mpped2 (ENSJJAG00000003402)	Fshb (ENSJJAG00000011959)	Kcna4 (ENSJJAG00000017398)	ENSJJAG00000017907	Mettl15 (ENSJJAG00000019606)	Lgr4 (ENSJJAG00000019874)	ENSJJAG00000005395	Bbox1 (ENSJJAG00000010708)	Fibin (ENSJJAG00000012158)	Slc5a12 (ENSJJAG00000015003)	Ano3 (ENSJJAG00000021499)	Muc15 (ENSJJAG00000024050)	ENSJJAG00000014852	AA467197 (ENSJJAG00000015034) #20	Gatm (ENSJJAG00000000329) #22	ENSJJAG00000013917 #23	Shf (ENSJJAG00000024265) #24	Duox1 (ENSJJAG00000014943) #25	Duoxa1 (ENSJJAG00000012397) #26	Duoxa2 (ENSJJAG00000018767) #27	ENSJJAG00000000265 #29	Terb2 (ENSJJAG00000017833) #30	Trim69 (ENSJJAG00000022679) #31	Spg11 (ENSJJAG00000015413) #35	ENSJJAG00000013170	ENSJJAG00000017217	Frmd5 (ENSJJAG00000014174)	Wdr76 (ENSJJAG00000024151)	ENSJJAG00000014416	ENSJJAG00000010647
Kangaroo rat	MODERN SPECIES	330	Cops2 (ENSDORG00000006941)	Secisbp2l (ENSDORG00000008662)	ENSDORG00000030215	ENSDORG00000010573	ENSDORG00000010570	Fbn1 (ENSDORG00000010561) #7	ENSDORG00000010560 #8	Slc12a1 (ENSDORG00000010558) #9	ENSDORG00000015835 #11	Slc24a5 (ENSDORG00000015834) #12	Sema6d (ENSDORG00000000896) #14	ENSDORG00000026845	Sqor (ENSDORG00000011465) #17	Bloc1s6 (ENSDORG00000024796) #18	Slc30a4 (ENSDORG00000028460) #19	Gatm (ENSDORG00000009786) #22	ENSDORG00000016196 #23	Shf (ENSDORG00000015296) #24	Duox1 (ENSDORG00000015290) #25	Duoxa1 (ENSDORG00000015289) #26	Duoxa2 (ENSDORG00000024063) #27	Duox2 (ENSDORG00000011040) #28	Sord (ENSDORG00000011039) #29	Terb2 (ENSDORG00000002002) #30	ENSDORG00000029129 #31	ENSDORG00000030028	Patl2 (ENSDORG00000026649) #34	Spg11 (ENSDORG00000008343) #35	ENSDORG00000008339 #36	Ctdspl2 (ENSDORG00000005704) #37	Golm2 (ENSDORG00000008498)
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Sciuridae	ANCESTRAL SPECIES	11	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397.p #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Marmotini	ANCESTRAL SPECIES	9	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397.p #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00390000012976.c.b.a	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37
Marmotini_b	ANCESTRAL SPECIES	4	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.xb.b #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397.p #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00390000012976.c.b.a	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37
Squirrel	MODERN SPECIES	71	SHC4 (ENSSTOG00000003069)	CEP152 (ENSSTOG00000003043)	FBN1 (ENSSTOG00000007824) #7	ENSSTOG00000007811 #8	SLC12A1 (ENSSTOG00000007768) #9	CTXN2 (ENSSTOG00000023277) #10	MYEF2 (ENSSTOG00000007740) #11	SLC24A5 (ENSSTOG00000007727) #12	SEMA6D (ENSSTOG00000015296) #14	ENSSTOG00000025343 #8	SQOR (ENSSTOG00000005093) #17	BLOC1S6 (ENSSTOG00000001615) #18	SLC30A4 (ENSSTOG00000001606) #19	C15orf48 (ENSSTOG00000021929) #20	SPATA5L1 (ENSSTOG00000028609) #21	GATM (ENSSTOG00000012180) #22	SLC28A2 (ENSSTOG00000012167) #23	SHF (ENSSTOG00000026488) #24	DUOX1 (ENSSTOG00000008816) #25	DUOXA1 (ENSSTOG00000008792) #26	DUOXA2 (ENSSTOG00000008782) #27	DUOX2 (ENSSTOG00000008727) #28	SORD (ENSSTOG00000008709) #29	TERB2 (ENSSTOG00000013661) #30	ENSSTOG00000033780	TRIM69 (ENSSTOG00000002274) #31	B2M (ENSSTOG00000032330) #33	PATL2 (ENSSTOG00000033848) #34	ENSSTOG00000002225 #35	EIF3J (ENSSTOG00000025483) #36	CTDSPL2 (ENSSTOG00000002215) #37
Arctic ground squirrel	MODERN SPECIES	4	SHC4 (ENSUPAG00010008562)	EID1 (ENSUPAG00010008597)	CEP152 (ENSUPAG00010008621)	FBN1 (ENSUPAG00010008765) #7	ENSUPAG00010008861 #8	SLC12A1 (ENSUPAG00010008880) #9	CTXN2 (ENSUPAG00010009280) #10	MYEF2 (ENSUPAG00010009284) #11	SLC24A5 (ENSUPAG00010009513) #12	SEMA6D (ENSUPAG00010009526) #14	SQOR (ENSUPAG00010009674) #17	BLOC1S6 (ENSUPAG00010009684) #18	SLC30A4 (ENSUPAG00010009697) #19	C15orf48 (ENSUPAG00010009717) #20	SPATA5L1 (ENSUPAG00010009731) #21	GATM (ENSUPAG00010009746) #22	SLC28A2 (ENSUPAG00010009757) #23	SHF (ENSUPAG00010009782) #24	DUOX1 (ENSUPAG00010009803) #25	DUOXA1 (ENSUPAG00010009830) #26	DUOXA2 (ENSUPAG00010009876) #27	DUOX2 (ENSUPAG00010009883) #28	SORD (ENSUPAG00010009931) #29	TERB2 (ENSUPAG00010009958) #30	TRIM69 (ENSUPAG00010009970) #31	ENSUPAG00010009982	B2M (ENSUPAG00010009989) #33	PATL2 (ENSUPAG00010009997) #34	SPG11 (ENSUPAG00010010037) #35	EIF3J (ENSUPAG00010010111) #36	CTDSPL2 (ENSUPAG00010010125) #37
Alpin marmot	MODERN SPECIES	7	SHC4 (ENSMMMG00000016518)	EID1 (ENSMMMG00000016532)	ENSMMMG00000016537	FBN1 (ENSMMMG00000016560) #7	ENSMMMG00000016659 #8	SLC12A1 (ENSMMMG00000016667) #9	CTXN2 (ENSMMMG00000016815) #10	ENSMMMG00000016819 #11	SLC24A5 (ENSMMMG00000016953) #12	SEMA6D (ENSMMMG00000016971) #14	SQOR (ENSMMMG00000017646) #17	BLOC1S6 (ENSMMMG00000017665) #18	SLC30A4 (ENSMMMG00000017672) #19	C15orf48 (ENSMMMG00000017695) #20	SPATA5L1 (ENSMMMG00000017707) #21	GATM (ENSMMMG00000017727) #22	SLC28A2 (ENSMMMG00000017753) #23	SHF (ENSMMMG00000017757) #24	DUOX1 (ENSMMMG00000017791) #25	DUOXA1 (ENSMMMG00000017815) #26	DUOXA2 (ENSMMMG00000017845) #27	DUOX2 (ENSMMMG00000017855) #28	SORD (ENSMMMG00000017888) #29	TERB2 (ENSMMMG00000017900) #30	TRIM69 (ENSMMMG00000017914) #31	ENSMMMG00000017923	B2M (ENSMMMG00000017935) #33	PATL2 (ENSMMMG00000017944) #34	SPG11 (ENSMMMG00000017966) #35	ENSMMMG00000017993 #36	CTDSPL2 (ENSMMMG00000018015) #37
Eurasian red squirrel	MODERN SPECIES	11	ENSSVLG00005001795	ENSSVLG00005001781	FBN1 (ENSSVLG00005001645) #7	ENSSVLG00005001592	ENSSVLG00005001505 #8	SLC12A1 (ENSSVLG00005001381) #9	CTXN2 (ENSSVLG00005001303) #10	MYEF2 (ENSSVLG00005001267) #11	SLC24A5 (ENSSVLG00005001196) #12	SEMA6D (ENSSVLG00005000952) #14	SQOR (ENSSVLG00005000806) #17	ENSSVLG00005000768 #18	SLC30A4 (ENSSVLG00005000746) #19	C15orf48 (ENSSVLG00005000724) #20	SPATA5L1 (ENSSVLG00005000694) #21	GATM (ENSSVLG00005000654) #22	SLC28A2 (ENSSVLG00005000606) #23	SHF (ENSSVLG00005000549) #24	DUOX1 (ENSSVLG00005000466) #25	DUOXA1 (ENSSVLG00005000409) #26	DUOXA2 (ENSSVLG00005000372) #27	DUOX2 (ENSSVLG00005000281) #28	SORD (ENSSVLG00005000220) #29	ENSSVLG00005000192	TERB2 (ENSSVLG00005000182) #30	TRIM69 (ENSSVLG00005005647) #31	B2M (ENSSVLG00005005583) #33	PATL2 (ENSSVLG00005005476) #34	ENSSVLG00005005441	SPG11 (ENSSVLG00005005365) #35	ENSSVLG00005005225 #36
Hystricomorpha	ANCESTRAL SPECIES	15	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT01010000222666	ENSGT00940000157224	ENSGT00730000111340	ENSGT00940000161456	ENSGT00390000002030	ENSGT00390000013481.c.a
Hystricomorpha_a	ANCESTRAL SPECIES	18	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00940000158652	ENSGT00940000157224	ENSGT00730000111340	ENSGT00940000161456	ENSGT00390000002030	ENSGT00390000013481.c.a
Hystricomorpha_b	ANCESTRAL SPECIES	18	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00940000158652	ENSGT00940000157224	ENSGT00730000111340	ENSGT00940000161456	ENSGT00390000002030	ENSGT00390000013481.c.a
Degu	MODERN SPECIES	146	ENSODEG00000007686	SECISBP2L (ENSODEG00000007846)	ENSODEG00000007930	ENSODEG00000007307	CEP152 (ENSODEG00000008644)	FBN1 (ENSODEG00000007689) #7	ENSODEG00000008550 #8	SLC12A1 (ENSODEG00000009402) #9	MYEF2 (ENSODEG00000007463) #11	SLC24A5 (ENSODEG00000010497) #12	SEMA6D (ENSODEG00000007614) #14	SQOR (ENSODEG00000008455) #17	BLOC1S6 (ENSODEG00000007779) #18	SLC30A4 (ENSODEG00000007906) #19	C15orf48 (ENSODEG00000009386) #20	GATM (ENSODEG00000009765) #22	SLC28A2 (ENSODEG00000010816) #23	SHF (ENSODEG00000008606) #24	DUOX1 (ENSODEG00000008417) #25	DUOXA1 (ENSODEG00000008753) #26	DUOXA2 (ENSODEG00000009819) #27	DUOX2 (ENSODEG00000009257) #28	SORD (ENSODEG00000008350) #29	TERB2 (ENSODEG00000010250) #30	TRIM69 (ENSODEG00000010623) #31	ENSODEG00000008739	ENSODEG00000008942
Long-tailed chinchilla	MODERN SPECIES	116	SHC4 (ENSCLAG00000014691)	EID1 (ENSCLAG00000008705)	CEP152 (ENSCLAG00000012592)	FBN1 (ENSCLAG00000014723) #7	DUT (ENSCLAG00000011626) #8	SLC12A1 (ENSCLAG00000008362) #9	CTXN2 (ENSCLAG00000011672) #10	MYEF2 (ENSCLAG00000008328) #11	SLC24A5 (ENSCLAG00000009536) #12	SEMA6D (ENSCLAG00000010651) #14	SQOR (ENSCLAG00000015903) #17	BLOC1S6 (ENSCLAG00000015243) #18	SLC30A4 (ENSCLAG00000010503) #19	C15orf48 (ENSCLAG00000010562) #20	ENSCLAG00000008984 #21	GATM (ENSCLAG00000012238) #22	SLC28A2 (ENSCLAG00000011544) #23	SHF (ENSCLAG00000009719) #24	DUOX1 (ENSCLAG00000011832) #25	DUOXA1 (ENSCLAG00000007621) #26	DUOXA2 (ENSCLAG00000009352) #27	DUOX2 (ENSCLAG00000009210) #28	SORD (ENSCLAG00000009127) #29	TERB2 (ENSCLAG00000012436) #30	TRIM69 (ENSCLAG00000013033) #31	DLGAP5 (ENSCLAG00000008776)	LGALS3 (ENSCLAG00000009650)	MAPK1IP1L (ENSCLAG00000009943)	SOCS4 (ENSCLAG00000010226)	ENSCLAG00000013863	GCH1 (ENSCLAG00000009462)
Guinea pig	MODERN SPECIES	23	ENSCPOG00000006525	CEP152 (ENSCPOG00000006518)	FBN1 (ENSCPOG00000004298) #7	DUT (ENSCPOG00000024107) #8	SLC12A1 (ENSCPOG00000005122) #9	CTXN2 (ENSCPOG00000031158) #10	MYEF2 (ENSCPOG00000010584) #11	SLC24A5 (ENSCPOG00000010579) #12	SEMA6D (ENSCPOG00000006931) #14	ENSCPOG00000025021	SQOR (ENSCPOG00000021297) #17	BLOC1S6 (ENSCPOG00000037068) #18	SLC30A4 (ENSCPOG00000040539) #19	C15orf48 (ENSCPOG00000033924) #20	SPATA5L1 (ENSCPOG00000008384) #21	GATM (ENSCPOG00000007904) #22	SLC28A2 (ENSCPOG00000005300) #23	SHF (ENSCPOG00000027041) #24	DUOX1 (ENSCPOG00000007302) #25	ENSCPOG00000030849 #26	DUOXA2 (ENSCPOG00000005034) #27	DUOX2 (ENSCPOG00000007267) #28	SORD (ENSCPOG00000002241) #29	TERB2 (ENSCPOG00000009515) #30	TRIM69 (ENSCPOG00000025547) #31	DLGAP5 (ENSCPOG00000004807)	LGALS3 (ENSCPOG00000038163)	MAPK1IP1L (ENSCPOG00000003450)	SOCS4 (ENSCPOG00000003449)	WDHD1 (ENSCPOG00000003440)	GCH1 (ENSCPOG00000003585)
Naked mole-rat female	MODERN SPECIES	11	ENSHGLG00000037945	DUT (ENSHGLG00000011864) #8	SLC12A1 (ENSHGLG00000014401) #9	CTXN2 (ENSHGLG00000018257) #10	MYEF2 (ENSHGLG00000018166) #11	SLC24A5 (ENSHGLG00000013142) #12	ENSHGLG00000032184	SEMA6D (ENSHGLG00000009924) #14	ENSHGLG00000038651	ENSHGLG00000035166	SQOR (ENSHGLG00000018746) #17	BLOC1S6 (ENSHGLG00000019337) #18	SLC30A4 (ENSHGLG00000016667) #19	C15orf48 (ENSHGLG00000016670) #20	SPATA5L1 (ENSHGLG00000043333) #21	GATM (ENSHGLG00000019276) #22	SLC28A2 (ENSHGLG00000014172) #23	ENSHGLG00000012788 #24	DUOX1 (ENSHGLG00000014552) #25	ENSHGLG00000013326 #26	DUOXA2 (ENSHGLG00000019350) #27	DUOX2 (ENSHGLG00000010033) #28	ENSHGLG00000041547	ENSHGLG00000050443	SORD (ENSHGLG00000039417) #29	ENSHGLG00000014203 #30	ENSHGLG00000044277	ENSHGLG00000046252 #31	ENSHGLG00000036163	ENSHGLG00000014601	LGALS3 (ENSHGLG00000019099)
Lagomorpha	ANCESTRAL SPECIES	7	ENSGT00940000154796.A	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Pika	MODERN SPECIES	1525													SLC30A4 (ENSOPRG00000016505) #19	C15orf48 (ENSOPRG00000016494) #20	SPATA5L1 (ENSOPRG00000016466) #21	GATM (ENSOPRG00000016460) #22	SLC28A2 (ENSOPRG00000016432) #23
Rabbit	MODERN SPECIES	8	MYEF2 (ENSOCUG00000013043) #11	SLC24A5 (ENSOCUG00000013038) #12	ENSOCUG00000031757	ENSOCUG00000021707	SEMA6D (ENSOCUG00000007901) #14	ENSOCUG00000035692	ENSOCUG00000032462	ENSOCUG00000030558	SQOR (ENSOCUG00000014347) #17	BLOC1S6 (ENSOCUG00000017351) #18	ENSOCUG00000030326	SLC30A4 (ENSOCUG00000013313) #19	ENSOCUG00000037926	ENSOCUG00000029216 #20	SPATA5L1 (ENSOCUG00000011209) #21	GATM (ENSOCUG00000014352) #22	SLC28A2 (ENSOCUG00000014340) #23	ENSOCUG00000014332 #24	DUOX1 (ENSOCUG00000014307) #25	DUOXA1 (ENSOCUG00000014298) #26	DUOXA2 (ENSOCUG00000014290) #27	DUOX2 (ENSOCUG00000014255) #28	SORD (ENSOCUG00000014246) #29	TERB2 (ENSOCUG00000027500) #30	TRIM69 (ENSOCUG00000008683) #31	ENSOCUG00000031456	B2M (ENSOCUG00000017117) #33	PATL2 (ENSOCUG00000006339) #34	SPG11 (ENSOCUG00000006317) #35	EIF3J (ENSOCUG00000005376) #36	CTDSPL2 (ENSOCUG00000005366) #37
Tree shrew	MODERN SPECIES	1814														C15orf48 (ENSTBEG00000009212) #20	SPATA5L1 (ENSTBEG00000008955) #21	GATM (ENSTBEG00000008793) #22	SLC28A2 (ENSTBEG00000008224) #23
Laurasiatheria	ANCESTRAL SPECIES	3	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Eulipotyphla	ANCESTRAL SPECIES	2352																ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23
Hedgehog	MODERN SPECIES	12737																GATM (ENSEEUG00000007782) #22
Common shrew	MODERN SPECIES	2663																GATM (ENSSARG00000006359) #22	SLC28A2 (ENSSARG00000006335) #23
Laurasiatheria_a	ANCESTRAL SPECIES	2	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Artiodactyla	ANCESTRAL SPECIES	3	ENSGT00940000154796.C	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Suina	ANCESTRAL SPECIES	12	ENSGT00940000154796.C	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Chacoan peccary	MODERN SPECIES	162	SHC4 (ENSCWAG00000013443)	CEP152 (ENSCWAG00000013079)	FBN1 (ENSCWAG00000012108) #7	DUT (ENSCWAG00000011642) #8	SLC12A1 (ENSCWAG00000010955) #9	CTXN2 (ENSCWAG00000010894) #10	MYEF2 (ENSCWAG00000010804) #11	SLC24A5 (ENSCWAG00000010661) #12	ENSCWAG00000010627	SEMA6D (ENSCWAG00000008056) #14	SQOR (ENSCWAG00000007880) #17	BLOC1S6 (ENSCWAG00000007810) #18	SLC30A4 (ENSCWAG00000005374) #19	C15orf48 (ENSCWAG00000005336) #20	SPATA5L1 (ENSCWAG00000005277) #21	GATM (ENSCWAG00000005235) #22	SLC28A2 (ENSCWAG00000005145) #23	SHF (ENSCWAG00000004983) #24	DUOX1 (ENSCWAG00000004826) #25	DUOXA1 (ENSCWAG00000004747) #26	DUOXA2 (ENSCWAG00000004695) #27	DUOX2 (ENSCWAG00000004540) #28	SORD (ENSCWAG00000004459) #29	TERB2 (ENSCWAG00000004414) #30	TRIM69 (ENSCWAG00000004231) #31	ENSCWAG00000004186 #33	PATL2 (ENSCWAG00000004115) #34	SPG11 (ENSCWAG00000004037) #35	EIF3J (ENSCWAG00000003919) #36	CTDSPL2 (ENSCWAG00000003850) #37	GOLM2 (ENSCWAG00000003803)
Pig	MODERN SPECIES		FBN1 (ENSSSCG00000004658) #7	DUT (ENSSSCG00000032141) #8	SLC12A1 (ENSSSCG00000004659) #9	CTXN2 (ENSSSCG00000040204) #10	MYEF2 (ENSSSCG00000004661) #11	SLC24A5 (ENSSSCG00000004662) #12	SEMA6D (ENSSSCG00000004663) #14	ENSSSCG00000052630	ENSSSCG00000051796	ENSSSCG00000044345	SQOR (ENSSSCG00000004666) #17	BLOC1S6 (ENSSSCG00000037384) #18	SLC30A4 (ENSSSCG00000004668) #19	C15orf48 (ENSSSCG00000004670) #20	SPATA5L1 (ENSSSCG00000004671) #21	GATM (ENSSSCG00000004672) #22	SLC28A2 (ENSSSCG00000004673) #23	SHF (ENSSSCG00000004674) #24	DUOX1 (ENSSSCG00000004675) #25	DUOXA1 (ENSSSCG00000004677) #26	DUOXA2 (ENSSSCG00000004676) #27	DUOX2 (ENSSSCG00000004678) #28	SORD (ENSSSCG00000004679) #29	TERB2 (ENSSSCG00000004680) #30	TRIM69 (ENSSSCG00000004681) #31	ENSSSCG00000004687 #33	B2M (ENSSSCG00000051899) #33	PATL2 (ENSSSCG00000061749) #34	SPG11 (ENSSSCG00000004684) #35	EIF3J (ENSSSCG00000004691) #36	CTDSPL2 (ENSSSCG00000035827) #37
Artiodactyla_a	ANCESTRAL SPECIES	2	ENSGT00940000154796.C	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Camelidae	ANCESTRAL SPECIES	23	ENSGT00490000043356.a	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700.d #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Arabian camel	MODERN SPECIES	32	SHC4 (ENSCDRG00005019741)	ENSCDRG00005019782	CEP152 (ENSCDRG00005019796)	FBN1 (ENSCDRG00005019854) #7	ENSCDRG00005020063	DUT (ENSCDRG00005006369) #8	SLC12A1 (ENSCDRG00005006494) #9	MYEF2 (ENSCDRG00005006730) #11	SLC24A5 (ENSCDRG00005007294) #12	SEMA6D (ENSCDRG00005007458) #14	SQOR (ENSCDRG00005007684) #17	BLOC1S6 (ENSCDRG00005007805) #18	SLC30A4 (ENSCDRG00005007913) #19	C15orf48 (ENSCDRG00005007958) #20	ENSCDRG00005008007 #21	GATM (ENSCDRG00005008146) #22	SLC28A2 (ENSCDRG00005008199) #23	SHF (ENSCDRG00005008251) #24	DUOX1 (ENSCDRG00005008355) #25	DUOXA1 (ENSCDRG00005008545) #26	DUOXA2 (ENSCDRG00005008709) #27	DUOX2 (ENSCDRG00005008808) #28	SORD (ENSCDRG00005008947) #29	TERB2 (ENSCDRG00005009057) #30	TRIM69 (ENSCDRG00005009159) #31	ENSCDRG00005009776	B2M (ENSCDRG00005009849) #33	PATL2 (ENSCDRG00005010156) #34	SPG11 (ENSCDRG00005010417) #35	EIF3J (ENSCDRG00005010710) #36	CTDSPL2 (ENSCDRG00005010912) #37
Alpaca	MODERN SPECIES	702														C15orf48 (ENSVPAG00000002727) #20	SPATA5L1 (ENSVPAG00000002725) #21	GATM (ENSVPAG00000002724) #22	SLC28A2 (ENSVPAG00000002722) #23	ENSVPAG00000002721 #24
Artiodactyla_b	ANCESTRAL SPECIES	2	ENSGT00940000154796.C	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.fb #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Cetacea	ANCESTRAL SPECIES	2	ENSGT00940000154796.C	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.fb.a.a #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397.y #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Odontoceti	ANCESTRAL SPECIES	2	ENSGT00940000154796.C	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.fb.a.a #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397.y #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00940000154796.C	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.fb.a.a #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397.y #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227.r #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.fb.b #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397.y #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT01010000228914	ENSGT00690000102227.r #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Monodontidae	ANCESTRAL SPECIES	15	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.fb.b #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397.y #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT01010000228914	ENSGT00690000102227.r #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Narwhal	MODERN SPECIES	308	ENSMMNG00015009285	CEP152 (ENSMMNG00015009292)	FBN1 (ENSMMNG00015009350) #7	ENSMMNG00015009615 #8	SLC12A1 (ENSMMNG00015009684) #9	MYEF2 (ENSMMNG00015009800) #11	CTXN2 (ENSMMNG00015009812) #10	SLC24A5 (ENSMMNG00015009832) #12	SEMA6D (ENSMMNG00015009885) #14	ENSMMNG00015009923	SQOR (ENSMMNG00015009936) #17	BLOC1S6 (ENSMMNG00015009962) #18	SLC30A4 (ENSMMNG00015009975) #19	C15orf48 (ENSMMNG00015009990) #20	SPATA5L1 (ENSMMNG00015010006) #21	GATM (ENSMMNG00015010024) #22	SLC28A2 (ENSMMNG00015010044) #23	SHF (ENSMMNG00015010074) #24	DUOXA1 (ENSMMNG00015010122) #26	DUOXA2 (ENSMMNG00015010141) #27	DUOX2 (ENSMMNG00015010174) #28	SORD (ENSMMNG00015010241) #29	TERB2 (ENSMMNG00015010263) #30	TRIM69 (ENSMMNG00015010291) #31	ENSMMNG00015010337	ENSMMNG00015010348	PATL2 (ENSMMNG00015010362) #34	SPG11 (ENSMMNG00015010483) #35	EIF3J (ENSMMNG00015010692) #36	CTDSPL2 (ENSMMNG00015010751) #37	GOLM2 (ENSMMNG00015010809)
Beluga whale	MODERN SPECIES	6	CEP152 (ENSDLEG00000002321)	FBN1 (ENSDLEG00000002928) #7	DUT (ENSDLEG00000006173) #8	SLC12A1 (ENSDLEG00000006236) #9	CTXN2 (ENSDLEG00000006560) #10	MYEF2 (ENSDLEG00000006582) #11	SLC24A5 (ENSDLEG00000006685) #12	SEMA6D (ENSDLEG00000006708) #14	ENSDLEG00000006773	ENSDLEG00000006776	SQOR (ENSDLEG00000006785) #17	BLOC1S6 (ENSDLEG00000006798) #18	SLC30A4 (ENSDLEG00000006806) #19	CUNH15orf48 (ENSDLEG00000006820) #20	SPATA5L1 (ENSDLEG00000006836) #21	GATM (ENSDLEG00000006846) #22	SLC28A2 (ENSDLEG00000006857) #23	SHF (ENSDLEG00000006873) #24	DUOXA1 (ENSDLEG00000006881) #26	ENSDLEG00000006884 #27	DUOX2 (ENSDLEG00000006894) #28	SORD (ENSDLEG00000006936) #29	TERB2 (ENSDLEG00000006943) #30	TRIM69 (ENSDLEG00000006949) #31	ENSDLEG00000006956	ENSDLEG00000006964	ENSDLEG00000006977 #33	PATL2 (ENSDLEG00000006992) #34	SPG11 (ENSDLEG00000007005) #35	EIF3J (ENSDLEG00000007104) #36	CTDSPL2 (ENSDLEG00000007127) #37
Vaquita	MODERN SPECIES	11	CEP152 (ENSPSNG00000001370)	FBN1 (ENSPSNG00000001444) #7	ENSPSNG00000001566 #8	SLC12A1 (ENSPSNG00000001705) #9	CTXN2 (ENSPSNG00000001834) #10	MYEF2 (ENSPSNG00000001875) #11	SLC24A5 (ENSPSNG00000001931) #12	SEMA6D (ENSPSNG00000002044) #14	ENSPSNG00000002100	ENSPSNG00000002115	SQOR (ENSPSNG00000002134) #17	BLOC1S6 (ENSPSNG00000002166) #18	SLC30A4 (ENSPSNG00000002193) #19	C15orf48 (ENSPSNG00000002224) #20	SPATA5L1 (ENSPSNG00000002248) #21	GATM (ENSPSNG00000002284) #22	SLC28A2 (ENSPSNG00000002310) #23	SHF (ENSPSNG00000002356) #24	DUOXA1 (ENSPSNG00000002438) #26	DUOXA2 (ENSPSNG00000002471) #27	DUOX2 (ENSPSNG00000002511) #28	SORD (ENSPSNG00000002602) #29	TERB2 (ENSPSNG00000002623) #30	TRIM69 (ENSPSNG00000002669) #31	ENSPSNG00000002746	ENSPSNG00000002764	B2M (ENSPSNG00000002776) #33	SPG11 (ENSPSNG00000002856) #35	EIF3J (ENSPSNG00000002999) #36	CTDSPL2 (ENSPSNG00000003048) #37	GOLM2 (ENSPSNG00000003082)
Dolphin	MODERN SPECIES	1896													SLC30A4 (ENSTTRG00000007663) #19	C15orf48 (ENSTTRG00000007655) #20	SPATA5L1 (ENSTTRG00000007646) #21	GATM (ENSTTRG00000007628) #22
Sperm whale	MODERN SPECIES	2	EID1 (ENSPCTG00005014143)	CEP152 (ENSPCTG00005014169)	FBN1 (ENSPCTG00005014246) #7	ENSPCTG00005015021 #8	SLC12A1 (ENSPCTG00005015544) #9	CTXN2 (ENSPCTG00005016323) #10	MYEF2 (ENSPCTG00005016362) #11	SLC24A5 (ENSPCTG00005016485) #12	SEMA6D (ENSPCTG00005016729) #14	ENSPCTG00005016975	SQOR (ENSPCTG00005017011) #17	BLOC1S6 (ENSPCTG00005017061) #18	SLC30A4 (ENSPCTG00005017182) #19	C11H15orf48 (ENSPCTG00005017238) #20	SPATA5L1 (ENSPCTG00005017290) #21	GATM (ENSPCTG00005017467) #22	SLC28A2 (ENSPCTG00005017518) #23	ENSPCTG00005017682 #24	DUOXA1 (ENSPCTG00005018438) #26	DUOXA2 (ENSPCTG00005018517) #27	DUOX2 (ENSPCTG00005018604) #28	ENSPCTG00005019153	SORD (ENSPCTG00005019172) #29	TERB2 (ENSPCTG00005019262) #30	TRIM69 (ENSPCTG00005019343) #31	ENSPCTG00005019525	B2M (ENSPCTG00005019544) #33	PATL2 (ENSPCTG00005019565) #34	SPG11 (ENSPCTG00005019767) #35	EIF3J (ENSPCTG00005019919) #36	CTDSPL2 (ENSPCTG00005019994) #37
Blue whale	MODERN SPECIES	11	SHC4 (ENSBMSG00010000726)	ENSBMSG00010000767	CEP152 (ENSBMSG00010000790)	FBN1 (ENSBMSG00010000886) #7	ENSBMSG00010000939 #8	SLC12A1 (ENSBMSG00010001064) #9	CTXN2 (ENSBMSG00010001235) #10	ENSBMSG00010001257 #11	SLC24A5 (ENSBMSG00010001301) #12	SEMA6D (ENSBMSG00010001437) #14	SQOR (ENSBMSG00010002207) #17	BLOC1S6 (ENSBMSG00010002230) #18	SLC30A4 (ENSBMSG00010002255) #19	C15orf48 (ENSBMSG00010002270) #20	SPATA5L1 (ENSBMSG00010002300) #21	GATM (ENSBMSG00010002348) #22	SLC28A2 (ENSBMSG00010002376) #23	SHF (ENSBMSG00010002435) #24	ENSBMSG00010002513 #28	DUOXA1 (ENSBMSG00010002535) #26	DUOXA2 (ENSBMSG00010002560) #27	DUOX2 (ENSBMSG00010002594) #28	SORD (ENSBMSG00010002662) #29	TERB2 (ENSBMSG00010002683) #30	TRIM69 (ENSBMSG00010002716) #31	B2M (ENSBMSG00010002841) #33	PATL2 (ENSBMSG00010002866) #34	SPG11 (ENSBMSG00010002909) #35	EIF3J (ENSBMSG00010002953) #36	CTDSPL2 (ENSBMSG00010002980) #37	GOLM2 (ENSBMSG00010003023)
Pecora	ANCESTRAL SPECIES	6	ENSGT00950000182870.a.b	ENSGT00940000154796.C.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.eb.a #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT00940000159502	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00390000004542	ENSGT00940000157933
Yarkand deer	MODERN SPECIES	3	ENSCHYG00000008356	ENSCHYG00000008383	CEP152 (ENSCHYG00000008408)	FBN1 (ENSCHYG00000008666) #7	ENSCHYG00000009220 #8	SLC12A1 (ENSCHYG00000009510) #9	CTXN2 (ENSCHYG00000010052) #10	MYEF2 (ENSCHYG00000010098) #11	SLC24A5 (ENSCHYG00000010192) #12	SEMA6D (ENSCHYG00000010351) #14	SQOR (ENSCHYG00000010838) #17	BLOC1S6 (ENSCHYG00000010914) #18	SLC30A4 (ENSCHYG00000010991) #19	C15orf48 (ENSCHYG00000011060) #20	SPATA5L1 (ENSCHYG00000011113) #21	GATM (ENSCHYG00000011211) #22	SLC28A2 (ENSCHYG00000011368) #23	SHF (ENSCHYG00000011602) #24	DUOX1 (ENSCHYG00000011814) #25	DUOXA1 (ENSCHYG00000012051) #26	DUOXA2 (ENSCHYG00000012114) #27	DUOX2 (ENSCHYG00000012306) #28	SORD (ENSCHYG00000012685) #29	FERMT2 (ENSCHYG00000012885)	DDHD1 (ENSCHYG00000013189)	ENSCHYG00000013717	BMP4 (ENSCHYG00000013745)	ENSCHYG00000013842	GMFB (ENSCHYG00000014201)	CGRRF1 (ENSCHYG00000014731)	SAMD4A (ENSCHYG00000014855)
Percora_a	ANCESTRAL SPECIES	8	ENSGT00950000182870.a.b	ENSGT00940000154796.C.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.eb.a #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT00940000159502	ENSGT00390000004717	ENSGT00950000182834.A.a.a	ENSGT00390000008920.c.a	ENSGT00390000004542	ENSGT00940000157933
Siberian musk deer	MODERN SPECIES	257	ENSMMSG00000010395	ENSMMSG00000010418	FBN1 (ENSMMSG00000010464) #7	ENSMMSG00000010905 #8	SLC12A1 (ENSMMSG00000011169) #9	CTXN2 (ENSMMSG00000011671) #10	MYEF2 (ENSMMSG00000011680) #11	SLC24A5 (ENSMMSG00000011715) #12	SEMA6D (ENSMMSG00000011831) #14	ENSMMSG00000011941	SQOR (ENSMMSG00000011958) #17	BLOC1S6 (ENSMMSG00000012005) #18	SLC30A4 (ENSMMSG00000012031) #19	C15orf48 (ENSMMSG00000012059) #20	SPATA5L1 (ENSMMSG00000012093) #21	GATM (ENSMMSG00000012122) #22	SLC28A2 (ENSMMSG00000012154) #23	ENSMMSG00000012230	SHF (ENSMMSG00000012264) #24	DUOX1 (ENSMMSG00000012375) #25	DUOXA1 (ENSMMSG00000012480) #26	DUOXA2 (ENSMMSG00000012519) #27	DUOX2 (ENSMMSG00000012565) #28	ENSMMSG00000012770 #29	ENSMMSG00000012843	FERMT2 (ENSMMSG00000012876)	DDHD1 (ENSMMSG00000012936)	BMP4 (ENSMMSG00000013092)	ENSMMSG00000013129	ENSMMSG00000013239	GMFB (ENSMMSG00000013304)
Bovidae	ANCESTRAL SPECIES	7	ENSGT00940000154796.C.b	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.eb.a #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT00940000159502	ENSGT00390000004717	ENSGT00950000182834.A.a.a.x	ENSGT00390000008920.c.a	ENSGT00390000004542	ENSGT00940000157933
Bovinae	ANCESTRAL SPECIES	11	ENSGT00490000043356.a	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.eb.a #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000002398.e.b	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT00940000159502	ENSGT00390000004717	ENSGT00950000182834.A.a.a.x	ENSGT00390000008920.c.a	ENSGT00390000004542
Bos	ANCESTRAL SPECIES	13	ENSGT00940000165319	ENSGT00940000154796.C.b.a	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.eb.a #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000002398.e.b	ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.a.a.a	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT01030000234574.B.c.a.b	ENSGT00940000159502	ENSGT00390000004717	ENSGT00950000182834.A.a.a.x
Bos_a	ANCESTRAL SPECIES	1	ENSGT00940000154796.C.b.a	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.eb.a #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000002398.e.b	ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.a.a.a	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT01030000234574.B.c.a.b	ENSGT00940000159502	ENSGT00390000004717	ENSGT00950000182834.A.a.a.x
Domestic yak	MODERN SPECIES	2	CEP152 (ENSBGRG00000015031)	FBN1 (ENSBGRG00000015364) #7	ENSBGRG00000016185 #8	SLC12A1 (ENSBGRG00000016691) #9	CTXN2 (ENSBGRG00000017870) #10	MYEF2 (ENSBGRG00000017891) #11	SLC24A5 (ENSBGRG00000018186) #12	SEMA6D (ENSBGRG00000018349) #14	SQOR (ENSBGRG00000018720) #17	BLOC1S6 (ENSBGRG00000018884) #18	SLC30A4 (ENSBGRG00000018987) #19	ENSBGRG00000019041	C15orf48 (ENSBGRG00000019087) #20	SPATA5L1 (ENSBGRG00000019163) #21	ENSBGRG00000019317	GATM (ENSBGRG00000019341) #22	SLC28A2 (ENSBGRG00000019499) #23	SHF (ENSBGRG00000019626) #24	DUOX1 (ENSBGRG00000020085) #25	DUOXA1 (ENSBGRG00000020344) #26	DUOXA2 (ENSBGRG00000020365) #27	DUOX2 (ENSBGRG00000020426) #28	SORD (ENSBGRG00000020659) #29	ENSBGRG00000021022	FERMT2 (ENSBGRG00000021063)	DDHD1 (ENSBGRG00000021474)	ENSBGRG00000022535	BMP4 (ENSBGRG00000022589)	ENSBGRG00000022641	CDKN3 (ENSBGRG00000022709)	CNIH1 (ENSBGRG00000023478)
Wild yak	MODERN SPECIES	225											SQOR (ENSBMUG00000024884) #17	BLOC1S6 (ENSBMUG00000024894) #18	SLC30A4 (ENSBMUG00000024903) #19	C15orf48 (ENSBMUG00000024914) #20	SPATA5L1 (ENSBMUG00000000099) #21	GATM (ENSBMUG00000000227) #22	SLC28A2 (ENSBMUG00000000501) #23	ENSBMUG00000000541 #24	DUOX1 (ENSBMUG00000000683) #25	DUOXA1 (ENSBMUG00000000715) #26	DUOXA2 (ENSBMUG00000000729) #27
Bos_b	ANCESTRAL SPECIES	11	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.eb.a #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT01100000263480.a.a.a.a.b.a.a.a.b.b.b	ENSGT01100000263480.a.b.b.a.a.b.b.a.b.a.a	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000002398.e.b	ENSGT01100000263506.a.e.a.a.a.b.a.a.a.c.a.a.a	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT01030000234574.B.c.a.b	ENSGT00940000159502	ENSGT00390000004717	ENSGT00950000182834.A.a.a.x
Cow	MODERN SPECIES	1	CEP152 (ENSBTAG00000011661)	FBN1 (ENSBTAG00000002278) #7	DUT (ENSBTAG00000011998) #8	SLC12A1 (ENSBTAG00000010145) #9	CTXN2 (ENSBTAG00000045847) #10	MYEF2 (ENSBTAG00000008771) #11	SLC24A5 (ENSBTAG00000004854) #12	SEMA6D (ENSBTAG00000016800) #14	SQOR (ENSBTAG00000010365) #17	BLOC1S6 (ENSBTAG00000012250) #18	SLC30A4 (ENSBTAG00000021019) #19	C10H15orf48 (ENSBTAG00000004558) #20	ENSBTAG00000050965	SPATA5L1 (ENSBTAG00000018279) #21	ENSBTAG00000053174	GATM (ENSBTAG00000005586) #22	SLC28A2 (ENSBTAG00000016327) #23	SHF (ENSBTAG00000020934) #24	DUOX1 (ENSBTAG00000016246) #25	DUOXA1 (ENSBTAG00000016242) #26	DUOXA2 (ENSBTAG00000016239) #27	DUOX2 (ENSBTAG00000016234) #28	SORD (ENSBTAG00000025496) #29	ENSBTAG00000052848	ENSBTAG00000047170	FERMT2 (ENSBTAG00000014501)	DDHD1 (ENSBTAG00000019924)	BMP4 (ENSBTAG00000003835)	CDKN3 (ENSBTAG00000019496)	CNIH1 (ENSBTAG00000019500)	GMFB (ENSBTAG00000054095)
Hybrid Bos Indicus	MODERN SPECIES	1	FBN1 (ENSBIXG00005014593) #7	DUT (ENSBIXG00005014535) #8	SLC12A1 (ENSBIXG00005014377) #9	CTXN2 (ENSBIXG00005001891) #10	MYEF2 (ENSBIXG00005001882) #11	SLC24A5 (ENSBIXG00005000248) #12	SEMA6D (ENSBIXG00005007268) #14	SQOR (ENSBIXG00005014032) #17	ENSBIXG00005014009	ENSBIXG00005013960	SLC30A4 (ENSBIXG00005013936) #19	ENSBIXG00005013915 #20	SPATA5L1 (ENSBIXG00005013882) #21	ENSBIXG00005006214	ENSBIXG00005013852	GATM (ENSBIXG00005013846) #22	SLC28A2 (ENSBIXG00005013807) #23	ENSBIXG00005013784	SHF (ENSBIXG00005013755) #24	DUOX1 (ENSBIXG00005013592) #25	DUOXA1 (ENSBIXG00005013371) #26	DUOXA2 (ENSBIXG00005013311) #27	DUOX2 (ENSBIXG00005007113) #28	SORD (ENSBIXG00005013158) #29	ENSBIXG00005013027	ENSBIXG00005013018	FERMT2 (ENSBIXG00005006212)	DDHD1 (ENSBIXG00005006721)	ENSBIXG00005012619	BMP4 (ENSBIXG00005006112)	ENSBIXG00005012544
American bison	MODERN SPECIES	3170										ENSBBBG00000018158	SQOR (ENSBBBG00000018180) #17	BLOC1S6 (ENSBBBG00000018197) #18	SLC30A4 (ENSBBBG00000007315) #19	C15orf48 (ENSBBBG00000018229) #20	SPATA5L1 (ENSBBBG00000018295) #21	GATM (ENSBBBG00000018314) #22	SLC28A2 (ENSBBBG00000018336) #23	SHF (ENSBBBG00000007622) #24	DUOX1 (ENSBBBG00000004505) #25	DUOXA1 (ENSBBBG00000004518) #26	DUOXA2 (ENSBBBG00000018452) #27	DUOX2 (ENSBBBG00000018501) #28	SORD (ENSBBBG00000004560) #29	ENSBBBG00000018520	FERMT2 (ENSBBBG00000007508)	DDHD1 (ENSBBBG00000004625)	BMP4 (ENSBBBG00000018643)	CDKN3 (ENSBBBG00000018754)	CNIH1 (ENSBBBG00000018822)	GMFB (ENSBBBG00000018858)	CGRRF1 (ENSBBBG00000018871)
Caprinae	ANCESTRAL SPECIES	11	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00990000208676	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.fb #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406.g #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT00940000159502	ENSGT00390000004717	ENSGT00950000182834.A.a.a.x	ENSGT00390000008920.c.a	ENSGT00390000004542	ENSGT00940000157933
Goat	MODERN SPECIES	1	CEP152 (ENSCHIG00000020655)	ENSCHIG00000008960	ENSCHIG00000016675	FBN1 (ENSCHIG00000021045) #7	ENSCHIG00000010553 #8	SLC12A1 (ENSCHIG00000020238) #9	CTXN2 (ENSCHIG00000013170) #10	MYEF2 (ENSCHIG00000022164) #11	SLC24A5 (ENSCHIG00000012687) #12	SEMA6D (ENSCHIG00000012568) #14	ENSCHIG00000011868 #17	BLOC1S6 (ENSCHIG00000021707) #18	SLC30A4 (ENSCHIG00000020960) #19	C15orf48 (ENSCHIG00000009615) #20	SPATA5L1 (ENSCHIG00000020089) #21	GATM (ENSCHIG00000017304) #22	SLC28A2 (ENSCHIG00000021565) #23	ENSCHIG00000012733 #24	DUOX1 (ENSCHIG00000008514) #25	DUOXA1 (ENSCHIG00000013626) #26	DUOXA2 (ENSCHIG00000010151) #27	DUOX2 (ENSCHIG00000012801) #28	SORD (ENSCHIG00000021458) #29	ENSCHIG00000012549	FERMT2 (ENSCHIG00000023803)	DDHD1 (ENSCHIG00000025888)	ENSCHIG00000008708	BMP4 (ENSCHIG00000021149)	CDKN3 (ENSCHIG00000010569)	CNIH1 (ENSCHIG00000021943)	GMFB (ENSCHIG00000022138)
Rambouillet Sheep	MODERN SPECIES	23	MYEF2 (ENSOARG00020007659) #11	SLC24A5 (ENSOARG00020008222) #12	SEMA6D (ENSOARG00020008460) #14	ENSOARG00020008814	ENSOARG00020008828	ENSOARG00020008854	ENSOARG00020008904	ENSOARG00020008939	ENSOARG00020008972	SQOR (ENSOARG00020009009) #17	ENSOARG00020009067	BLOC1S6 (ENSOARG00020009083) #18	SLC30A4 (ENSOARG00020009191) #19	C15orf48 (ENSOARG00020009251) #20	SPATA5L1 (ENSOARG00020009315) #21	GATM (ENSOARG00020009432) #22	SLC28A2 (ENSOARG00020009490) #23	SHF (ENSOARG00020009604) #24	DUOX1 (ENSOARG00020010050) #25	DUOXA1 (ENSOARG00020011656) #26	DUOXA2 (ENSOARG00020011766) #27	DUOX2 (ENSOARG00020011873) #28	SORD (ENSOARG00020012388) #29	FERMT2 (ENSOARG00020012866)	DDHD1 (ENSOARG00020013495)	BMP4 (ENSOARG00020014655)	CDKN3 (ENSOARG00020014749)	CNIH1 (ENSOARG00020015091)	GMFB (ENSOARG00020015342)	CGRRF1 (ENSOARG00020015430)	SAMD4A (ENSOARG00020015503)
Laurasiatheria_b	ANCESTRAL SPECIES	3	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Carnivora	ANCESTRAL SPECIES		ENSGT00950000182870.a.b	ENSGT00940000154796.B	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00940000164980	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Caniformia	ANCESTRAL SPECIES	12	ENSGT00950000182870.a.b	ENSGT00940000154796.B	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00940000164980	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Caniformia_b	ANCESTRAL SPECIES	15	ENSGT00950000182870.a.b	ENSGT00940000154796.B	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00940000164980	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Ursidae	ANCESTRAL SPECIES	21	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000154555.b	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00940000154259.l.q.a.a	ENSGT00550000074781 #29	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a	ENSGT00940000156346
Ursus	ANCESTRAL SPECIES	223									ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000153314.a.a	ENSGT00940000154555.b	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00940000154259.l.q.a.a	ENSGT00550000074781 #29
American black bear	MODERN SPECIES	4190														C15orf48 (ENSUAMG00000024606) #20	SPATA5L1 (ENSUAMG00000024605) #21	GATM (ENSUAMG00000024601) #22
Polar bear	MODERN SPECIES	509									SQOR (ENSUMAG00000018985) #17	BLOC1S6 (ENSUMAG00000018982) #18	ENSUMAG00000018980	ENSUMAG00000018978	SLC30A4 (ENSUMAG00000018970) #19	C15orf48 (ENSUMAG00000018966) #20	ENSUMAG00000018965 #21	GATM (ENSUMAG00000018949) #22	ENSUMAG00000018937 #24	DUOX1 (ENSUMAG00000018697) #25	DUOXA1 (ENSUMAG00000018659) #26	DUOXA2 (ENSUMAG00000018652) #27	DUOX2 (ENSUMAG00000017101) #28	ENSUMAG00000016947	SORD (ENSUMAG00000016945) #29
Giant Panda	MODERN SPECIES	15	DUT (ENSAMEG00000001873) #8	SLC12A1 (ENSAMEG00000001894) #9	CTXN2 (ENSAMEG00000019296) #10	MYEF2 (ENSAMEG00000001964) #11	SLC24A5 (ENSAMEG00000002007) #12	SEMA6D (ENSAMEG00000002021) #14	ENSAMEG00000028409	ENSAMEG00000019159	SQOR (ENSAMEG00000012577) #17	BLOC1S6 (ENSAMEG00000012604) #18	ENSAMEG00000029724	ENSAMEG00000012620	SLC30A4 (ENSAMEG00000012621) #19	C15orf48 (ENSAMEG00000012639) #20	SPATA5L1 (ENSAMEG00000012640) #21	GATM (ENSAMEG00000012647) #22	ENSAMEG00000029216 #24	ENSAMEG00000014940 #28	ENSAMEG00000024346	ENSAMEG00000024775	ENSAMEG00000014949 #29	TRIM69 (ENSAMEG00000014975) #31	B2M (ENSAMEG00000023631) #33	SPG11 (ENSAMEG00000015003) #35	EIF3J (ENSAMEG00000015104) #36	CTDSPL2 (ENSAMEG00000015120) #37	GOLM2 (ENSAMEG00000015143)	FRMD5 (ENSAMEG00000015158)	WDR76 (ENSAMEG00000028955)	MFAP1 (ENSAMEG00000015181)	HYPK (ENSAMEG00000027266)
Mustelinae	ANCESTRAL SPECIES	28	ENSGT00940000154796.B	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00940000164980	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
American mink	MODERN SPECIES	33																GATM (ENSNVIG00000021706) #22	ENSNVIG00000021693	SHF (ENSNVIG00000021661) #24	DUOX1 (ENSNVIG00000021571) #25	DUOXA1 (ENSNVIG00000021534) #26	DUOXA2 (ENSNVIG00000021525) #27	DUOX2 (ENSNVIG00000021471) #28	DHSO (ENSNVIG00000021441) #29	TERB2 (ENSNVIG00000021431) #30	TRIM69 (ENSNVIG00000021378) #31	B2M (ENSNVIG00000021359) #33	PATL2 (ENSNVIG00000021337) #34	ENSNVIG00000021323	SPG11 (ENSNVIG00000021173) #35	EIF3J (ENSNVIG00000021150) #36	CTSL2 (ENSNVIG00000021084) #37
Ferret	MODERN SPECIES	190	COPS2 (ENSMPUG00000012327)	SECISBP2L (ENSMPUG00000012321)	ENSMPUG00000019845	SHC4 (ENSMPUG00000012311)	CEP152 (ENSMPUG00000012304)	FBN1 (ENSMPUG00000011861) #7	DUT (ENSMPUG00000011820) #8	SLC12A1 (ENSMPUG00000011351) #9	MYEF2 (ENSMPUG00000011254) #11	SLC24A5 (ENSMPUG00000011175) #12	SEMA6D (ENSMPUG00000011169) #14	SQOR (ENSMPUG00000011163) #17	BLOC1S6 (ENSMPUG00000011159) #18	SLC30A4 (ENSMPUG00000011156) #19	SPATA5L1 (ENSMPUG00000011151) #21	GATM (ENSMPUG00000011127) #22	ENSMPUG00000011125	SHF (ENSMPUG00000011096) #24	DUOX1 (ENSMPUG00000010923) #25	DUOXA1 (ENSMPUG00000010890) #26	DUOXA2 (ENSMPUG00000010863) #27	ENSMPUG00000010889 #28	DUOX2 (ENSMPUG00000010854) #28	SORD (ENSMPUG00000010850) #29	TERB2 (ENSMPUG00000010841) #30	TRIM69 (ENSMPUG00000010837) #31	B2M (ENSMPUG00000010832) #33	ENSMPUG00000010828 #34	SPG11 (ENSMPUG00000010811) #35	EIF3J (ENSMPUG00000010765) #36	CTDSPL2 (ENSMPUG00000010708) #37
Canidae	ANCESTRAL SPECIES	15	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00940000154955.e.b.b	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00390000018086.z.j.b.a.b.a.a	ENSGT00940000154555.b	ENSGT00940000157545 #19	ENSGT00390000009277.w #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00940000154259.l.q.a.a	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT01090000260593
Canis_lupus	ANCESTRAL SPECIES	17	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00940000154955.e.b.b	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00390000018086.z.j.b.a.b.a.a	ENSGT00940000157545 #19	ENSGT00390000009277.w #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00940000154259.l.q.a.a	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT01090000260593
Dog	MODERN SPECIES	23	ENSCAFG00845020766	FBN1 (ENSCAFG00845020514) #7	ENSCAFG00845020266 #8	SLC12A1 (ENSCAFG00845019364) #9	CTXN2 (ENSCAFG00845019232) #10	MYEF2 (ENSCAFG00845018891) #11	SLC24A5 (ENSCAFG00845018687) #12	SEMA6D (ENSCAFG00845018164) #14	ENSCAFG00845030832	ENSCAFG00845030823	ENSCAFG00845030816	SLC30A4 (ENSCAFG00845030805) #19	SQOR (ENSCAFG00845030784) #17	ENSCAFG00845030762 #20	SPATA5L1 (ENSCAFG00845030761) #21	GATM (ENSCAFG00845030751) #22	SHF (ENSCAFG00845030708) #24	DUOX1 (ENSCAFG00845030684) #25	DUOXA1 (ENSCAFG00845030668) #26	ENSCAFG00845030661 #27	ENSCAFG00845029770 #28	ENSCAFG00845028980	ENSCAFG00845028964	SORD (ENSCAFG00845028851) #29	TERB2 (ENSCAFG00845028800) #30	TRIM69 (ENSCAFG00845028698) #31	B2M (ENSCAFG00845028622) #33	PATL2 (ENSCAFG00845028566) #34	SPG11 (ENSCAFG00845028015) #35	EIF3J (ENSCAFG00845027834) #36	ENSCAFG00845027793
Dingo	MODERN SPECIES	205	DUT (ENSCAFG00020021937) #8	SLC12A1 (ENSCAFG00020021951) #9	CTXN2 (ENSCAFG00020021998) #10	ENSCAFG00020021999 #11	ENSCAFG00020022004 #11	SLC24A5 (ENSCAFG00020022007) #12	SEMA6D (ENSCAFG00020022019) #14	ENSCAFG00020022062	SQOR (ENSCAFG00020022072) #17	ENSCAFG00020022076 #18	ENSCAFG00020022078	ENSCAFG00020022080	SLC30A4 (ENSCAFG00020022087) #19	ENSCAFG00020022099 #20	SPATA5L1 (ENSCAFG00020022102) #21	GATM (ENSCAFG00020022103) #22	SHF (ENSCAFG00020022108) #24	DUOX1 (ENSCAFG00020022112) #25	DUOXA1 (ENSCAFG00020022117) #26	DUOXA2 (ENSCAFG00020022121) #27	DUOX2 (ENSCAFG00020022124) #28	ENSCAFG00020022140	ENSCAFG00020022141	SORD (ENSCAFG00020022142) #29	TERB2 (ENSCAFG00020022149) #30	TRIM69 (ENSCAFG00020022153) #31	ENSCAFG00020022163	B2M (ENSCAFG00020022164) #33	PATL2 (ENSCAFG00020022169) #34	ENSCAFG00020022175 #35	EIF3J (ENSCAFG00020022194) #36
Red fox	MODERN SPECIES	28	DUT (ENSVVUG00000014696) #8	SLC12A1 (ENSVVUG00000014691) #9	CTXN2 (ENSVVUG00000014689) #10	MYEF2 (ENSVVUG00000014591) #11	SLC24A5 (ENSVVUG00000014565) #12	SEMA6D (ENSVVUG00000014505) #14	ENSVVUG00000014487	ENSVVUG00000014466	SQOR (ENSVVUG00000014449) #17	BLOC1S6 (ENSVVUG00000014441) #18	ENSVVUG00000014437	ENSVVUG00000014434	SLC30A4 (ENSVVUG00000014431) #19	ENSVVUG00000014428	SPATA5L1 (ENSVVUG00000014419) #21	GATM (ENSVVUG00000014413) #22	ENSVVUG00000014411	ENSVVUG00000014405 #24	DUOX1 (ENSVVUG00000012755) #25	DUOXA1 (ENSVVUG00000012625) #26	DUOXA2 (ENSVVUG00000012595) #27	DUOX2 (ENSVVUG00000011752) #28	ENSVVUG00000011679	ENSVVUG00000011669	ENSVVUG00000011649 #29	TERB2 (ENSVVUG00000011641) #30	TRIM69 (ENSVVUG00000011621) #31	ENSVVUG00000011616	B2M (ENSVVUG00000011612) #33	PATL2 (ENSVVUG00000011576) #34	SPG11 (ENSVVUG00000010933) #35
Felidae	ANCESTRAL SPECIES	1	ENSGT00940000154796.B.a	ENSGT00950000182870.b	ENSGT00950000183178.a.q.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.lb #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00940000164980	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Panthera	ANCESTRAL SPECIES	3	ENSGT00940000154796.B.a	ENSGT00950000182870.b	ENSGT00950000183178.a.q.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.lb #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00940000164980	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Tiger	MODERN SPECIES	162											SQOR (ENSPTIG00000012750) #17	ENSPTIG00000012523 #18	SLC30A4 (ENSPTIG00000012335) #19	C15orf48 (ENSPTIG00000012233) #20	SPATA5L1 (ENSPTIG00000011590) #21	GATM (ENSPTIG00000011027) #22	ENSPTIG00000010931 #24	DUOXA1 (ENSPTIG00000009004) #26	DUOXA2 (ENSPTIG00000008771) #27	DUOX2 (ENSPTIG00000006269) #28	SORD (ENSPTIG00000005806) #29	TERB2 (ENSPTIG00000020953) #30	TRIM69 (ENSPTIG00000020194) #31	B2M (ENSPTIG00000020043) #33	PATL2 (ENSPTIG00000018964) #34	ENSPTIG00000018506	SPG11 (ENSPTIG00000014679) #35	ENSPTIG00000014467 #36	CTDSPL2 (ENSPTIG00000014014) #37	GOLM2 (ENSPTIG00000013118)	FRMD5 (ENSPTIG00000011007)
Panthera_a	ANCESTRAL SPECIES	15	ENSGT00940000154796.B.a	ENSGT00950000182870.b	ENSGT00950000183178.a.q.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390.lb #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00940000164980	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
leopard	MODERN SPECIES	7	CEP152 (ENSPPRG00000018946)	ENSPPRG00000021032	FBN1 (ENSPPRG00000014404) #7	ENSPPRG00000012937 #8	SLC12A1 (ENSPPRG00000012425) #9	CTXN2 (ENSPPRG00000020991) #10	MYEF2 (ENSPPRG00000011446) #11	SLC24A5 (ENSPPRG00000009506) #12	SEMA6D (ENSPPRG00000009330) #14	SQOR (ENSPPRG00000008452) #17	BLOC1S6 (ENSPPRG00000008244) #18	ENSPPRG00000007887	SLC30A4 (ENSPPRG00000007859) #19	C15orf48 (ENSPPRG00000007756) #20	SPATA5L1 (ENSPPRG00000007724) #21	GATM (ENSPPRG00000007457) #22	ENSPPRG00000007254 #24	DUOX1 (ENSPPRG00000007197) #25	DUOXA1 (ENSPPRG00000006399) #26	DUOXA2 (ENSPPRG00000006212) #27	DUOX2 (ENSPPRG00000006178) #28	SORD (ENSPPRG00000005633) #29	TERB2 (ENSPPRG00000005472) #30	TRIM69 (ENSPPRG00000004978) #31	B2M (ENSPPRG00000004663) #33	PATL2 (ENSPPRG00000004279) #34	SPG11 (ENSPPRG00000004121) #35	ENSPPRG00000001708	EIF3J (ENSPPRG00000001550) #36	CTDSPL2 (ENSPPRG00000001320) #37	GOLM2 (ENSPPRG00000000787)
lion	MODERN SPECIES	6	CEP152 (ENSPLOG00000004689)	ENSPLOG00000004708	FBN1 (ENSPLOG00000004746) #7	ENSPLOG00000004839 #8	SLC12A1 (ENSPLOG00000004906) #9	CTXN2 (ENSPLOG00000004969) #10	MYEF2 (ENSPLOG00000005065) #11	SLC24A5 (ENSPLOG00000005120) #12	SEMA6D (ENSPLOG00000005257) #14	SQOR (ENSPLOG00000005467) #17	BLOC1S6 (ENSPLOG00000005492) #18	ENSPLOG00000005512	SLC30A4 (ENSPLOG00000005527) #19	C15orf48 (ENSPLOG00000005558) #20	SPATA5L1 (ENSPLOG00000005594) #21	GATM (ENSPLOG00000005638) #22	SHF (ENSPLOG00000010778) #24	DUOX1 (ENSPLOG00000010950) #25	DUOXA1 (ENSPLOG00000011350) #26	DUOXA2 (ENSPLOG00000011446) #27	DUOX2 (ENSPLOG00000011532) #28	SORD (ENSPLOG00000012043) #29	TERB2 (ENSPLOG00000012132) #30	TRIM69 (ENSPLOG00000012241) #31	ENSPLOG00000012459	B2M (ENSPLOG00000012478) #33	PATL2 (ENSPLOG00000012569) #34	SPG11 (ENSPLOG00000012786) #35	ENSPLOG00000012840	EIF3J (ENSPLOG00000012912) #36	CTDSPL2 (ENSPLOG00000013170) #37
Cat	MODERN SPECIES	237	SHC4 (ENSFCAG00000035557)	ENSFCAG00000029320	CEP152 (ENSFCAG00000009080)	ENSFCAG00000035975	FBN1 (ENSFCAG00000015352) #7	ENSFCAG00000015350 #8	SLC12A1 (ENSFCAG00000015347) #9	MYEF2 (ENSFCAG00000027198) #11	SLC24A5 (ENSFCAG00000022887) #12	SEMA6D (ENSFCAG00000010985) #14	SQOR (ENSFCAG00000007568) #17	BLOC1S6 (ENSFCAG00000039690) #18	SLC30A4 (ENSFCAG00000022435) #19	CB3H15orf48 (ENSFCAG00000037777) #20	SPATA5L1 (ENSFCAG00000019110) #21	GATM (ENSFCAG00000023809) #22	SHF (ENSFCAG00000007565) #24	DUOX1 (ENSFCAG00000007564) #25	DUOXA1 (ENSFCAG00000039686) #26	DUOXA2 (ENSFCAG00000007562) #27	DUOX2 (ENSFCAG00000007561) #28	SORD (ENSFCAG00000032311) #29	TERB2 (ENSFCAG00000038712) #30	TRIM69 (ENSFCAG00000002880) #31	ENSFCAG00000053809	ENSFCAG00000049044	B2M (ENSFCAG00000012230) #33	SPG11 (ENSFCAG00000012217) #35	ENSFCAG00000037985	EIF3J (ENSFCAG00000034878) #36	CTDSPL2 (ENSFCAG00000036750) #37
Laurasiatheria_c	ANCESTRAL SPECIES	1	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Chiroptera	ANCESTRAL SPECIES	17	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Microchiroptera	ANCESTRAL SPECIES	20	ENSGT00950000182870.a.b	ENSGT00940000154796.A	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Microbat	MODERN SPECIES	960	ENSMLUG00000026203	DUT (ENSMLUG00000006842) #8	SLC12A1 (ENSMLUG00000006815) #9	CTXN2 (ENSMLUG00000025495) #10	MYEF2 (ENSMLUG00000006781) #11	SLC24A5 (ENSMLUG00000006760) #12	ENSMLUG00000030579	SEMA6D (ENSMLUG00000007932) #14	SQOR (ENSMLUG00000005503) #17	BLOC1S6 (ENSMLUG00000005498) #18	SLC30A4 (ENSMLUG00000005492) #19	C15orf48 (ENSMLUG00000006208) #20	SPATA5L1 (ENSMLUG00000030376) #21	ENSMLUG00000029436	ENSMLUG00000029217	GATM (ENSMLUG00000007241) #22
Greater horseshoe bat	MODERN SPECIES	24	SHC4 (ENSRFEG00010002689)	ENSRFEG00010002721	CEP152 (ENSRFEG00010002757)	FBN1 (ENSRFEG00010002836) #7	ENSRFEG00010002932 #8	SLC12A1 (ENSRFEG00010002987) #9	CTXN2 (ENSRFEG00010003027) #10	ENSRFEG00010003062 #11	SLC24A5 (ENSRFEG00010003102) #12	SEMA6D (ENSRFEG00010003213) #14	SQOR (ENSRFEG00010003335) #17	BLOC1S6 (ENSRFEG00010003358) #18	SLC30A4 (ENSRFEG00010003375) #19	ENSRFEG00010003387 #20	SPATA5L1 (ENSRFEG00010003397) #21	GATM (ENSRFEG00010003409) #22	SLC28A2 (ENSRFEG00010003439) #23	SHF (ENSRFEG00010003501) #24	DUOX1 (ENSRFEG00010003542) #25	DUOXA1 (ENSRFEG00010003595) #26	DUOXA2 (ENSRFEG00010003625) #27	DUOX2 (ENSRFEG00010003663) #28	SORD (ENSRFEG00010003730) #29	TERB2 (ENSRFEG00010003759) #30	TRIM69 (ENSRFEG00010003788) #31	ENSRFEG00010003828	B2M (ENSRFEG00010003837) #33	PATL2 (ENSRFEG00010003861) #34	SPG11 (ENSRFEG00010003925) #35	EIF3J (ENSRFEG00010003971) #36	CTDSPL2 (ENSRFEG00010003997) #37
Megabat	MODERN SPECIES	4420											SQOR (ENSPVAG00000003080) #17	BLOC1S6 (ENSPVAG00000003079) #18	SLC30A4 (ENSPVAG00000003077) #19	C15orf48 (ENSPVAG00000003076) #20	SPATA5L1 (ENSPVAG00000003075) #21	GATM (ENSPVAG00000003074) #22
Equus	ANCESTRAL SPECIES	4	ENSGT00950000182870.a.b	ENSGT00940000154796.C	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030.o #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812.k #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00390000010318	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37
Donkey	MODERN SPECIES	11	ENSEASG00005016810	CEP152 (ENSEASG00005016832)	FBN1 (ENSEASG00005017178) #7	DUT (ENSEASG00005017779) #8	SLC12A1 (ENSEASG00005017794) #9	CTXN2 (ENSEASG00005023826) #10	MYEF2 (ENSEASG00005017818) #11	SLC24A5 (ENSEASG00005017836) #12	SEMA6D (ENSEASG00005017844) #14	ENSEASG00005017867	SQOR (ENSEASG00005017873) #17	ENSEASG00005034859 #18	SLC30A4 (ENSEASG00005017885) #19	ENSEASG00005035204 #20	SPATA5L1 (ENSEASG00005017892) #21	GATM (ENSEASG00005017893) #22	ENSEASG00005033893 #23	SHF (ENSEASG00005017909) #24	DUOX1 (ENSEASG00005017922) #25	DUOXA1 (ENSEASG00005017942) #26	DUOXA2 (ENSEASG00005017945) #27	DUOX2 (ENSEASG00005017953) #28	SORD (ENSEASG00005017966) #29	TERB2 (ENSEASG00005017968) #30	TRIM69 (ENSEASG00005017972) #31	ENSEASG00005024955	B2M (ENSEASG00005038138) #33	PATL2 (ENSEASG00005017984) #34	SPG11 (ENSEASG00005017999) #35	EIF3J (ENSEASG00005018015) #36	CTDSPL2 (ENSEASG00005018020) #37
Horse	MODERN SPECIES		MYEF2 (ENSECAG00000005741) #11	ENSECAG00000032930 #12	DUT (ENSECAG00000015971) #8	ENSECAG00000038938 #9	ENSECAG00000044310 #10	ENSECAG00000034546 #11	ENSECAG00000038008 #12	SEMA6D (ENSECAG00000016676) #14	ENSECAG00000049121	ENSECAG00000051852	SQOR (ENSECAG00000008826) #17	ENSECAG00000051169 #18	SLC30A4 (ENSECAG00000020274) #19	C1H15orf48 (ENSECAG00000012148) #20	SPATA5L1 (ENSECAG00000012436) #21	GATM (ENSECAG00000014243) #22	SLC28A2 (ENSECAG00000017825) #23	SHF (ENSECAG00000017035) #24	DUOX1 (ENSECAG00000023918) #25	DUOXA1 (ENSECAG00000009034) #26	DUOXA2 (ENSECAG00000014758) #27	DUOX2 (ENSECAG00000017764) #28	SORD (ENSECAG00000005266) #29	TERB2 (ENSECAG00000014348) #30	TRIM69 (ENSECAG00000018398) #31	B2M (ENSECAG00000000685)	SPG11 (ENSECAG00000001155) #35	EIF3J (ENSECAG00000008716) #36	CTDSPL2 (ENSECAG00000011865) #37	GOLM2 (ENSECAG00000016304)	ENSECAG00000045361
Atlantogenata	ANCESTRAL SPECIES	2	ENSGT00490000043356.a	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00510000046908.a.b	ENSGT00390000000973.a.b	ENSGT00390000010318	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35
Xenarthra	ANCESTRAL SPECIES	17														ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00940000160707.b #31	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a	ENSGT00940000156346
Sloth	MODERN SPECIES	5955																GATM (ENSCHOG00000007781) #22
Armadillo	MODERN SPECIES	2343															SPATA5L1 (ENSDNOG00000017889) #21	GATM (ENSDNOG00000003385) #22	SLC28A2 (ENSDNOG00000008853) #23	SHF (ENSDNOG00000033228) #24	DUOX1 (ENSDNOG00000018039) #25	DUOXA1 (ENSDNOG00000024883) #26	DUOXA2 (ENSDNOG00000024760) #27	DUOX2 (ENSDNOG00000018036) #28	SORD (ENSDNOG00000045476) #29	TRIM69 (ENSDNOG00000011843) #31	B2M (ENSDNOG00000038230) #33	PATL2 (ENSDNOG00000036837) #34	ENSDNOG00000032325	SPG11 (ENSDNOG00000000762) #35	EIF3J (ENSDNOG00000042545) #36	CTDSPL2 (ENSDNOG00000000228) #37	GOLM2 (ENSDNOG00000017815)
Afrotheria	ANCESTRAL SPECIES	101	ENSGT00490000043356.a	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00940000164052	ENSGT00390000000973.a.b	ENSGT00390000010318	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35
Afrotheria_a	ANCESTRAL SPECIES	102	ENSGT00490000043356.a	ENSGT00950000182870.a.b	ENSGT00950000182870.b	ENSGT00950000183158.D.b.f #7	ENSGT00390000018390 #8	ENSGT00940000158030 #9	ENSGT00940000154412.B.b #10	ENSGT00940000157397 #11	ENSGT01030000234532.A.b #12	ENSGT00940000159303 #14	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00940000164052	ENSGT00390000000973.a.b	ENSGT00390000010318	ENSGT00690000102227 #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35
Elephant	MODERN SPECIES	568	SECISBP2L (ENSLAFG00000006484)	SHC4 (ENSLAFG00000008736)	CEP152 (ENSLAFG00000014279)	FBN1 (ENSLAFG00000000416) #7	DUT (ENSLAFG00000004976) #8	SLC12A1 (ENSLAFG00000012999) #9	CTXN2 (ENSLAFG00000029871) #10	MYEF2 (ENSLAFG00000012990) #11	SLC24A5 (ENSLAFG00000021672) #12	SEMA6D (ENSLAFG00000006206) #14	SQOR (ENSLAFG00000008703) #17	BLOC1S6 (ENSLAFG00000000655) #18	SLC30A4 (ENSLAFG00000015131) #19	C15orf48 (ENSLAFG00000016645) #20	ENSLAFG00000016633 #21	GATM (ENSLAFG00000017301) #22	ENSLAFG00000017118 #23	SHF (ENSLAFG00000017107) #24	DUOX1 (ENSLAFG00000017095) #25	DUOXA1 (ENSLAFG00000017086) #26	DUOXA2 (ENSLAFG00000017083) #27	DUOX2 (ENSLAFG00000017067) #28	SORD (ENSLAFG00000026045) #29	TERB2 (ENSLAFG00000005909) #30	TRIM69 (ENSLAFG00000005906) #31	ENSLAFG00000030698	B2M (ENSLAFG00000006059) #33	PATL2 (ENSLAFG00000031124) #34	SPG11 (ENSLAFG00000009271) #35	EIF3J (ENSLAFG00000009268) #36	CTDSPL2 (ENSLAFG00000009263) #37
Hyrax	MODERN SPECIES	12182																GATM (ENSPCAG00000000880) #22
Tenrec	MODERN SPECIES	6518																GATM (ENSETEG00000016314) #22
Marsupialia	ANCESTRAL SPECIES		ENSGT00970000193421.B	ENSGT00940000156572	ENSGT00390000006205.b	ENSGT00940000153431.a	ENSGT01020000230438.B.b.b.a	ENSGT00950000183193.B	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227.h #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00940000156572	ENSGT00390000006205.b	ENSGT00940000153431.a	ENSGT01020000230438.B.b.b.a	ENSGT00950000182945.b.b.e.b	ENSGT00950000183193.B	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227.h #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Diprotodontia	ANCESTRAL SPECIES		ENSGT00940000156572	ENSGT00390000006205.b	ENSGT00940000153431.a	ENSGT01020000230438.B.b.b.a	ENSGT00950000182945.b.b.e.b	ENSGT00950000183193.B	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277 #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227.h #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Diprotodontia_a	ANCESTRAL SPECIES	1	ENSGT00940000156572	ENSGT00390000006205.b	ENSGT00940000153431.a	ENSGT01020000230438.B.b.b.a	ENSGT00950000182945.b.b.e.b	ENSGT00950000183193.B	ENSGT00940000154553.a.b	ENSGT00810000125473.B	ENSGT00940000158051	ENSGT00940000158745	ENSGT00390000019406 #17	ENSGT00510000047812 #18	ENSGT00940000157545 #19	ENSGT00390000009277.bb #20	ENSGT00940000160700 #21	ENSGT00390000011613 #22	ENSGT00390000016025.b.h #23	ENSGT00940000159452 #24	ENSGT00940000161792 #25	ENSGT00390000008240.m #26	ENSGT00390000008240.n #27	ENSGT00940000160291 #28	ENSGT00550000074781 #29	ENSGT00390000012336 #30	ENSGT00940000160707.b #31	ENSGT00690000102227.h #33	ENSGT00520000055649.b #34	ENSGT00390000016791 #35	ENSGT00390000018400 #36	ENSGT01040000240503.A.a.a #37	ENSGT00530000063675.a
Common wonbat	MODERN SPECIES	1031	HEATR5A (ENSVURG00010001756)	DTD2 (ENSVURG00010001842)	GPR33 (ENSVURG00010001847)	NUBPL (ENSVURG00010001936)	ENSVURG00010002007	ARHGAP5 (ENSVURG00010002087)	AKAP6 (ENSVURG00010002193)	NPAS3 (ENSVURG00010002315)	EGLN3 (ENSVURG00010002628)	ENSVURG00010002650	SQOR (ENSVURG00010002691) #17	BLOC1S6 (ENSVURG00010002717) #18	SLC30A4 (ENSVURG00010002727) #19	ENSVURG00010002749 #20	SPATA5L1 (ENSVURG00010002757) #21	GATM (ENSVURG00010002775) #22	SLC28A2 (ENSVURG00010002858) #23	SHF (ENSVURG00010004068) #24	DUOX1 (ENSVURG00010004192) #25	DUOXA1 (ENSVURG00010004249) #26	DUOXA2 (ENSVURG00010004271) #27	DUOX2 (ENSVURG00010004330) #28	SORD (ENSVURG00010004446) #29	TERB2 (ENSVURG00010004481) #30	ENSVURG00010004496 #31	ENSVURG00010004533 #33	PATL2 (ENSVURG00010004547) #34	SPG11 (ENSVURG00010004690) #35	EIF3J (ENSVURG00010005418) #36	CTDSPL2 (ENSVURG00010005444) #37	GOLM2 (ENSVURG00010005465)
koala	MODERN SPECIES	135								ENSPCIG00000034983	NPAS3 (ENSPCIG00000019859)	EGLN3 (ENSPCIG00000036989)	SQOR (ENSPCIG00000036709) #17	BLOC1S6 (ENSPCIG00000030830) #18	SLC30A4 (ENSPCIG00000019902) #19	ENSPCIG00000019905 #20	SPATA5L1 (ENSPCIG00000019906) #21	GATM (ENSPCIG00000019907) #22	ENSPCIG00000008429	SLC28A2 (ENSPCIG00000019908) #23	SHF (ENSPCIG00000019911) #24	DUOX1 (ENSPCIG00000019915) #25	DUOXA1 (ENSPCIG00000020297) #26	DUOXA2 (ENSPCIG00000020304) #27	DUOX2 (ENSPCIG00000020309) #28	ENSPCIG00000026855 #29	TERB2 (ENSPCIG00000018251) #30	TRIM69 (ENSPCIG00000018252) #31	ENSPCIG00000018254 #33	ENSPCIG00000018256 #34	SPG11 (ENSPCIG00000018260) #35	ENSPCIG00000018265 #36	CTDSPL2 (ENSPCIG00000018267) #37
Wallaby	MODERN SPECIES	8051																ENSMEUG00000014902 #22
Tasmanian devil	MODERN SPECIES	1	AP4S1 (ENSSHAG00000013484)	HECTD1 (ENSSHAG00000013045)	HEATR5A (ENSSHAG00000011970)	DTD2 (ENSSHAG00000024859)	GPR33 (ENSSHAG00000011325)	ENSSHAG00000028480	NUBPL (ENSSHAG00000008500)	ARHGAP5 (ENSSHAG00000001822)	AKAP6 (ENSSHAG00000013667)	NPAS3 (ENSSHAG00000025296)	ENSSHAG00000012920	ENSSHAG00000008981 #17	SLC30A4 (ENSSHAG00000025011) #19	C15orf48 (ENSSHAG00000006212) #20	SPATA5L1 (ENSSHAG00000005783) #21	GATM (ENSSHAG00000004129) #22	SLC28A2 (ENSSHAG00000002014) #23	SHF (ENSSHAG00000017575) #24	DUOX1 (ENSSHAG00000017498) #25	DUOXA1 (ENSSHAG00000017473) #26	DUOXA2 (ENSSHAG00000017461) #27	DUOX2 (ENSSHAG00000017417) #28	SORD (ENSSHAG00000017314) #29	TERB2 (ENSSHAG00000029007) #30	TRIM69 (ENSSHAG00000017021) #31	PATL2 (ENSSHAG00000016963) #34	SPG11 (ENSSHAG00000016808) #35	EIF3J (ENSSHAG00000026935) #36	CTDSPL2 (ENSSHAG00000016577) #37	GOLM2 (ENSSHAG00000022377)	FRMD5 (ENSSHAG00000014835)
Opossum	MODERN SPECIES		DTD2 (ENSMODG00000045920)	GPR33 (ENSMODG00000050260)	ENSMODG00000024099	NUBPL (ENSMODG00000024100)	ARHGAP5 (ENSMODG00000017613)	AKAP6 (ENSMODG00000017618)	NPAS3 (ENSMODG00000017620)	ENSMODG00000042896	EGLN3 (ENSMODG00000017625)	SQOR (ENSMODG00000017627) #17	BLOC1S6 (ENSMODG00000017628) #18	SLC30A4 (ENSMODG00000017630) #19	ENSMODG00000042102 #20	ENSMODG00000028279 #20	SPATA5L1 (ENSMODG00000017634) #21	GATM (ENSMODG00000017640) #22	ENSMODG00000027763 ##23	SLC28A2 (ENSMODG00000017644) #23	ENSMODG00000017645 #24	DUOX1 (ENSMODG00000017660) #25	DUOXA1 (ENSMODG00000017670) #26	DUOXA2 (ENSMODG00000017671) #27	ENSMODG00000017680 #28	SORD (ENSMODG00000017683) #29	TERB2 (ENSMODG00000017684) #30	TRIM69 (ENSMODG00000017686) #31	B2M (ENSMODG00000017688) #33	PATL2 (ENSMODG00000017690) #34	SPG11 (ENSMODG00000017693) #35	ENSMODG00000017696 #36	ENSMODG00000017697
Platypus	MODERN SPECIES	16	ZFAND6 (ENSOANG00000002944)	ENSOANG00000047570	BCL2A1 (ENSOANG00000013017)	MTHFS (ENSOANG00000009193)	ENSOANG00000045582 #20	SLC30A4 (ENSOANG00000006336) #19	BLOC1S6 (ENSOANG00000042638) #18	SQOR (ENSOANG00000015184) #17	SPPL2A (ENSOANG00000008684)	TRPM7 (ENSOANG00000006883)	USP50 (ENSOANG00000006882)	USP8 (ENSOANG00000006879)	GABPB1 (ENSOANG00000006878)	HDC (ENSOANG00000038775)	SLC27A2 (ENSOANG00000006875)	ENSOANG00000006872 #22	ENSOANG00000044704	PDE8A (ENSOANG00000049727)	FSD2 (ENSOANG00000004282)	WHAMM (ENSOANG00000046757)	HOMER2 (ENSOANG00000050248)	ENSOANG00000004275	ENSOANG00000004274	BTBD1 (ENSOANG00000013090)	TM6SF1 (ENSOANG00000020097)	ENSOANG00000004080	BNC1 (ENSOANG00000048584)	SH3GL3 (ENSOANG00000004069)	MINAR1 (ENSOANG00000010787)	ENSOANG00000020741	TMC3 (ENSOANG00000041878)
Sauria	ANCESTRAL SPECIES	10	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Lepidosauria	ANCESTRAL SPECIES	19	ENSGT00940000160101.w	ENSGT00940000160101.x	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d
Episquamata	ANCESTRAL SPECIES	9	ENSGT00390000004624.a.b	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Laterata	ANCESTRAL SPECIES	16	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160700 #21	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00940000168079	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00550000074806
Common wall lizard	MODERN SPECIES	5	ENSPMRG00000016350	ENSPMRG00000016356	SPATA5L1 (ENSPMRG00000016369) #21	ENSPMRG00000016374	SLC30A4 (ENSPMRG00000016379) #19	BLOC1S6 (ENSPMRG00000016383) #18	SQOR (ENSPMRG00000016388) #17	ENSPMRG00000016394	SPPL2A (ENSPMRG00000016403)	TRPM7 (ENSPMRG00000016586)	USP50 (ENSPMRG00000017719)	USP8 (ENSPMRG00000017790)	GABPB1 (ENSPMRG00000017997)	HDC (ENSPMRG00000018009)	SLC27A2 (ENSPMRG00000018083)	GATM (ENSPMRG00000018090) #22	PDE8A (ENSPMRG00000018103)	ENSPMRG00000018111	FSD2 (ENSPMRG00000018115)	WHAMM (ENSPMRG00000018125)	ENSPMRG00000018135	BTBD1 (ENSPMRG00000018147)	ENSPMRG00000018155	ENSPMRG00000018159	TM6SF1 (ENSPMRG00000018163)	HDGFL3 (ENSPMRG00000018170)	BNC1 (ENSPMRG00000018178)	SH3GL3 (ENSPMRG00000018185)	ENSPMRG00000018196	ADAMTSL3 (ENSPMRG00000018219)	ENSPMRG00000018292
Argentine black and white tegu	MODERN SPECIES	46	DTWD1 (ENSSMRG00000022361)	ENSSMRG00000022362	SPATA5L1 (ENSSMRG00000022363) #21	SLC30A4 (ENSSMRG00000022365) #19	BLOC1S6 (ENSSMRG00000022367) #18	SQOR (ENSSMRG00000022368) #17	ENSSMRG00000022369	SPPL2A (ENSSMRG00000022370)	TRPM7 (ENSSMRG00000022371)	USP50 (ENSSMRG00000022372)	USP8 (ENSSMRG00000022373)	ENSSMRG00000022374	GABPB1 (ENSSMRG00000022375)	HDC (ENSSMRG00000022376)	SLC27A2 (ENSSMRG00000022377)	GATM (ENSSMRG00000022378) #22	PDE8A (ENSSMRG00000022379)
Toxicofera	ANCESTRAL SPECIES	15	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Elapidae	DUPLICATION
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES	12	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000159842.ac.a	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613.a.a #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324.s	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b.a	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143.e	ENSGT00390000007252.d	ENSGT00940000171184
Elapidae_a	ANCESTRAL SPECIES	17	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000159842.ac.a	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613.a.a #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324.s	ENSGT00390000011190	ENSGT00940000168079	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b.a	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143.e	ENSGT00390000007252.d
Acanthophiinae	ANCESTRAL SPECIES	17	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000159842.ac.a	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613.a.a #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324.s	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b.a	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143.e	ENSGT00390000007252.d	ENSGT00940000171184
Mainland tiger snake	MODERN SPECIES	88	ENSNSUG00000019469 #21	C15orf48 (ENSNSUG00000019467) #20	SLC30A4 (ENSNSUG00000019449) #19	BLOC1S6 (ENSNSUG00000019448) #18	ENSNSUG00000019447	SQOR (ENSNSUG00000019446) #17	ENSNSUG00000019445	ENSNSUG00000019444	SPPL2A (ENSNSUG00000019443)	TRPM7 (ENSNSUG00000019442)	USP50 (ENSNSUG00000019441)	USP8 (ENSNSUG00000019440)	GABPB1 (ENSNSUG00000019439)	HDC (ENSNSUG00000019438)	SLC27A2 (ENSNSUG00000019437)	ENSNSUG00000019436 #22	ENSNSUG00000019435	ENSNSUG00000019434	ENSNSUG00000019433	ENSNSUG00000019432	HOMER2 (ENSNSUG00000019431)	ENSNSUG00000019430	ENSNSUG00000019429	BTBD1 (ENSNSUG00000019428)	TM6SF1 (ENSNSUG00000019427)	HDGFL3 (ENSNSUG00000019426)	BNC1 (ENSNSUG00000019425)	SH3GL3 (ENSNSUG00000019424)	ENSNSUG00000019423	ENSNSUG00000019422	ENSNSUG00000019421
Eastern brown snake	MODERN SPECIES	44	ENSPTXG00000008379	SPATA5L1 (ENSPTXG00000008376) #21	C15orf48 (ENSPTXG00000005750) #20	SLC30A4 (ENSPTXG00000005749) #19	BLOC1S6 (ENSPTXG00000005748) #18	SQOR (ENSPTXG00000005747) #17	ENSPTXG00000005746	ENSPTXG00000005745	SPPL2A (ENSPTXG00000005744)	TRPM7 (ENSPTXG00000005743)	USP50 (ENSPTXG00000005742)	USP8 (ENSPTXG00000005741)	GABPB1 (ENSPTXG00000005739)	HDC (ENSPTXG00000005707)	SLC27A2 (ENSPTXG00000005706)	GATM (ENSPTXG00000005705) #22	ENSPTXG00000005704	ENSPTXG00000005699	ENSPTXG00000005697	WHAMM (ENSPTXG00000005696)	HOMER2 (ENSPTXG00000005695)	ENSPTXG00000005693	ENSPTXG00000005692	BTBD1 (ENSPTXG00000005690)	ENSPTXG00000005689	ENSPTXG00000005687	HDGFL3 (ENSPTXG00000005686)	BNC1 (ENSPTXG00000005667)	SH3GL3 (ENSPTXG00000005660)	ENSPTXG00000005658	ADAMTSL3 (ENSPTXG00000005649)
Elapidae	ANCESTRAL SPECIES																	ENSGT00390000011613.a.b #22
Indian cobra	MODERN SPECIES	14	ENSNNAG00000019103	SPATA5L1 (ENSNNAG00000019114) #21	C15orf48 (ENSNNAG00000019116) #20	SLC30A4 (ENSNNAG00000019118) #19	BLOC1S6 (ENSNNAG00000019120) #18	SQOR (ENSNNAG00000019122) #17	ENSNNAG00000019125	ENSNNAG00000019126	ENSNNAG00000019128	TRPM7 (ENSNNAG00000019137)	USP50 (ENSNNAG00000019144)	USP8 (ENSNNAG00000019145)	GABPB1 (ENSNNAG00000019146)	HDC (ENSNNAG00000019147)	SLC27A2 (ENSNNAG00000003825)	ENSNNAG00000003902 #22	PDE8A (ENSNNAG00000003934)	FSD2 (ENSNNAG00000003958)	WHAMM (ENSNNAG00000004004)	HOMER2 (ENSNNAG00000004093)	ENSNNAG00000004126	ENSNNAG00000004139	BTBD1 (ENSNNAG00000004162)	TM6SF1 (ENSNNAG00000004210)	HDGFL3 (ENSNNAG00000004248)	BNC1 (ENSNNAG00000004277)	SH3GL3 (ENSNNAG00000004309)	ENSNNAG00000004376	ADAMTSL3 (ENSNNAG00000004464)	SAXO2 (ENSNNAG00000004922)	EFL1 (ENSNNAG00000004951)
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00390000011613.a.b #22
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00390000011613.a.b #22
Mainland tiger snake	MODERN SPECIES	2568																ENSNSUG00000003584 #22
Elapidae	ANCESTRAL SPECIES																	ENSGT00390000011613.b #22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00390000011613.b #22
Blue-lipped sea krait	MODERN SPECIES	533													KCNJ2 (ENSLLTG00000010455)	ENSLLTG00000009767	SLC27A2 (ENSLLTG00000009739)	GATM (ENSLLTG00000009724) #22
Lizard	MODERN SPECIES	447																ENSACAG00000004389 #22
tuatara	MODERN SPECIES	126	ENSSPUG00000011407	ENSSPUG00000011395	ATP8B4 (ENSSPUG00000011354)	C15orf48 (ENSSPUG00000011293) #20	SLC30A4 (ENSSPUG00000011286) #19	BLOC1S6 (ENSSPUG00000011274) #18	SQOR (ENSSPUG00000011244) #17	ENSSPUG00000011228	SPPL2A (ENSSPUG00000011146)	TRPM7 (ENSSPUG00000010871)	USP50 (ENSSPUG00000010816)	USP8 (ENSSPUG00000010804)	GABPB1 (ENSSPUG00000010792)	HDC (ENSSPUG00000010770)	SLC27A2 (ENSSPUG00000010748)	GATM (ENSSPUG00000010726) #22	ENSSPUG00000010709	ENSSPUG00000010702	ENSSPUG00000010693	ENSSPUG00000010686	ENSSPUG00000010676	ENSSPUG00000010665	FSD2 (ENSSPUG00000010593)	WHAMM (ENSSPUG00000010552)	ENSSPUG00000010544	HOMER2 (ENSSPUG00000010512)	ENSSPUG00000010499	C15orf40 (ENSSPUG00000010493)	BTBD1 (ENSSPUG00000010473)	SUPT16H (ENSSPUG00000010408)	RAB2B (ENSSPUG00000010112)
Archelosauria	ANCESTRAL SPECIES	13	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Archosauria	ANCESTRAL SPECIES	9	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Aves	ANCESTRAL SPECIES	14	ENSGT00990000205468	ENSGT00940000153766.B	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00910000146654	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Neognathae	ANCESTRAL SPECIES	11	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Neognathae_b	ANCESTRAL SPECIES	13	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Passeriformes	ANCESTRAL SPECIES	12	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Passeriformes_d	ANCESTRAL SPECIES	12	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Passeriformes_g	ANCESTRAL SPECIES	13	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Passeroidea	ANCESTRAL SPECIES	12	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Zebra finch	MODERN SPECIES	1	FGF7 (ENSTGUG00000027805)	DTWD1 (ENSTGUG00000007331)	SPATA5L1 (ENSTGUG00000007340) #21	ENSTGUG00000022847	SLC30A4 (ENSTGUG00000007351) #19	BLOC1S6 (ENSTGUG00000007369) #18	SQOR (ENSTGUG00000007375) #17	ENSTGUG00000007396	ENSTGUG00000025054	SPPL2A (ENSTGUG00000007425)	TRPM7 (ENSTGUG00000007440)	USP8 (ENSTGUG00000007507)	USP50 (ENSTGUG00000007496)	GABPB1 (ENSTGUG00000026845)	HDC (ENSTGUG00000007569)	GATM (ENSTGUG00000007597) #22	PDE8A (ENSTGUG00000007621)	FSD2 (ENSTGUG00000007666)	WHAMM (ENSTGUG00000007672)	HOMER2 (ENSTGUG00000007682)	ENSTGUG00000028282	ENSTGUG00000007701	BTBD1 (ENSTGUG00000007705)	TM6SF1 (ENSTGUG00000007727)	HDGFL3 (ENSTGUG00000007749)	BNC1 (ENSTGUG00000007753)	SH3GL3 (ENSTGUG00000007759)	ENSTGUG00000007777	ADAMTSL3 (ENSTGUG00000007800)	SAXO2 (ENSTGUG00000007844)	EFL1 (ENSTGUG00000007850)
Common canary	MODERN SPECIES	12	FGF7 (ENSSCAG00000005194)	DTWD1 (ENSSCAG00000005200)	SPATA5L1 (ENSSCAG00000005208) #21	C15orf48 (ENSSCAG00000005211) #20	SLC30A4 (ENSSCAG00000005215) #19	BLOC1S6 (ENSSCAG00000005220) #18	SQOR (ENSSCAG00000005222) #17	ENSSCAG00000005225	ENSSCAG00000005229	SPPL2A (ENSSCAG00000005244)	TRPM7 (ENSSCAG00000005261)	USP8 (ENSSCAG00000005275)	USP50 (ENSSCAG00000005283)	GABPB1 (ENSSCAG00000005288)	HDC (ENSSCAG00000005290)	GATM (ENSSCAG00000005298) #22	PDE8A (ENSSCAG00000005304)	FSD2 (ENSSCAG00000005320)	WHAMM (ENSSCAG00000005332)	HOMER2 (ENSSCAG00000005338)	ENSSCAG00000005341	ENSSCAG00000005344	BTBD1 (ENSSCAG00000005352)	TM6SF1 (ENSSCAG00000005360)	HDGFL3 (ENSSCAG00000005367)	BNC1 (ENSSCAG00000005374)	SH3GL3 (ENSSCAG00000005388)	ENSSCAG00000005399	ADAMTSL3 (ENSSCAG00000005422)	SAXO2 (ENSSCAG00000005481)	ENSSCAG00000005483
Medium ground finch	MODERN SPECIES	16	FGF7 (ENSGFOG00000002066)	DTWD1 (ENSGFOG00000002054)	SPATA5L1 (ENSGFOG00000002043) #21	ENSGFOG00000002035	SLC30A4 (ENSGFOG00000002020) #19	BLOC1S6 (ENSGFOG00000002011) #18	SQOR (ENSGFOG00000002001) #17	ENSGFOG00000001995	ENSGFOG00000001989	SPPL2A (ENSGFOG00000001961)	TRPM7 (ENSGFOG00000001913)	USP50 (ENSGFOG00000001892)	USP8 (ENSGFOG00000001867)	GABPB1 (ENSGFOG00000001861)	HDC (ENSGFOG00000001849)	GATM (ENSGFOG00000001842) #22	PDE8A (ENSGFOG00000001830)	FSD2 (ENSGFOG00000001811)	WHAMM (ENSGFOG00000001797)	HOMER2 (ENSGFOG00000001781)	ENSGFOG00000001775	ENSGFOG00000001764	BTBD1 (ENSGFOG00000001720)	TM6SF1 (ENSGFOG00000001702)	HDGFL3 (ENSGFOG00000001696)	BNC1 (ENSGFOG00000001682)	SH3GL3 (ENSGFOG00000001675)	ENSGFOG00000001643	ADAMTSL3 (ENSGFOG00000001615)	SAXO2 (ENSGFOG00000001605)	ENSGFOG00000001596
Flycatcher	MODERN SPECIES	1	DTWD1 (ENSFALG00000025090)	ENSFALG00000027735	SPATA5L1 (ENSFALG00000011487) #21	C15orf48 (ENSFALG00000011485) #20	SLC30A4 (ENSFALG00000011480) #19	BLOC1S6 (ENSFALG00000026626) #18	SQOR (ENSFALG00000027391) #17	ENSFALG00000028981	ENSFALG00000027060	SPPL2A (ENSFALG00000011434)	TRPM7 (ENSFALG00000011416)	USP50 (ENSFALG00000026025)	USP8 (ENSFALG00000011392)	GABPB1 (ENSFALG00000011370)	HDC (ENSFALG00000011339)	ENSFALG00000011319 #22	ENSFALG00000011280	FSD2 (ENSFALG00000022881)	WHAMM (ENSFALG00000011224)	HOMER2 (ENSFALG00000011215)	ENSFALG00000011211	BTBD1 (ENSFALG00000025818)	TM6SF1 (ENSFALG00000011182)	HDGFL3 (ENSFALG00000011161)	BNC1 (ENSFALG00000011147)	SH3GL3 (ENSFALG00000011132)	ENSFALG00000011122	ADAMTSL3 (ENSFALG00000011113)	SAXO2 (ENSFALG00000027196)	EFL1 (ENSFALG00000011103)	MEX3B (ENSFALG00000011102)
Great tit	MODERN SPECIES	1	GALK2 (ENSPMJG00000019184)	FGF7 (ENSPMJG00000019185)	DTWD1 (ENSPMJG00000019187)	SPATA5L1 (ENSPMJG00000019190) #21	ENSPMJG00000019191	SLC30A4 (ENSPMJG00000019193) #19	BLOC1S6 (ENSPMJG00000019194) #18	SQOR (ENSPMJG00000019195) #17	ENSPMJG00000019196	SPPL2A (ENSPMJG00000019197)	TRPM7 (ENSPMJG00000019198)	USP50 (ENSPMJG00000019199)	USP8 (ENSPMJG00000000051)	GABPB1 (ENSPMJG00000000237)	HDC (ENSPMJG00000000248)	GATM (ENSPMJG00000000282) #22	PDE8A (ENSPMJG00000000298)	FSD2 (ENSPMJG00000000348)	WHAMM (ENSPMJG00000000360)	HOMER2 (ENSPMJG00000000385)	ENSPMJG00000000408	ENSPMJG00000000420	BTBD1 (ENSPMJG00000000426)	TM6SF1 (ENSPMJG00000000441)	HDGFL3 (ENSPMJG00000000466)	BNC1 (ENSPMJG00000000487)	SH3GL3 (ENSPMJG00000000514)	ENSPMJG00000000530	ADAMTSL3 (ENSPMJG00000000577)	SAXO2 (ENSPMJG00000000642)	EFL1 (ENSPMJG00000000647)
Neognathae_c	ANCESTRAL SPECIES	15	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Kakapo	MODERN SPECIES	1	GALK2 (ENSSHBG00005020296)	FGF7 (ENSSHBG00005020294)	DTWD1 (ENSSHBG00005020290)	SPATA5L1 (ENSSHBG00005020287) #21	C15orf48 (ENSSHBG00005020286) #20	SLC30A4 (ENSSHBG00005020283) #19	BLOC1S6 (ENSSHBG00005020282) #18	SQOR (ENSSHBG00005020281) #17	NMRK2 (ENSSHBG00005020278)	SPPL2A (ENSSHBG00005020276)	TRPM7 (ENSSHBG00005016879)	USP8 (ENSSHBG00005016425)	GABPB1 (ENSSHBG00005016414)	HDC (ENSSHBG00005016403)	SLC27A2 (ENSSHBG00005016387)	GATM (ENSSHBG00005016379) #22	ENSSHBG00005016362	ENSSHBG00005016358	FSD2 (ENSSHBG00005016341)	WHAMM (ENSSHBG00005016334)	HOMER2 (ENSSHBG00005016330)	ENSSHBG00005016325	ENSSHBG00005016318	BTBD1 (ENSSHBG00005016313)	TM6SF1 (ENSSHBG00005016309)	HDGFL3 (ENSSHBG00005016303)	BNC1 (ENSSHBG00005016268)	SH3GL3 (ENSSHBG00005016254)	ENSSHBG00005016250	ADAMTSL3 (ENSSHBG00005016233)	SAXO2 (ENSSHBG00005016220)
Golden eagle	MODERN SPECIES	21	DTWD1 (ENSACCG00020011221)	SPATA5L1 (ENSACCG00020011230) #21	C15orf48 (ENSACCG00020011244) #20	SLC30A4 (ENSACCG00020011263) #19	BLOC1S6 (ENSACCG00020011273) #18	SQOR (ENSACCG00020011285) #17	ENSACCG00020011306	ENSACCG00020011322	SPPL2A (ENSACCG00020011358)	TRPM7 (ENSACCG00020011402)	USP50 (ENSACCG00020011427)	USP8 (ENSACCG00020011473)	GABPB1 (ENSACCG00020011533)	HDC (ENSACCG00020011559)	SLC27A2 (ENSACCG00020011594)	GATM (ENSACCG00020011727) #22	PDE8A (ENSACCG00020011791)	FSD2 (ENSACCG00020011900)	WHAMM (ENSACCG00020011947)	HOMER2 (ENSACCG00020011969)	ENSACCG00020012036	BTBD1 (ENSACCG00020012130)	TM6SF1 (ENSACCG00020012235)	HDGFL3 (ENSACCG00020012292)	BNC1 (ENSACCG00020012355)	SH3GL3 (ENSACCG00020012411)	ENSACCG00020012454	ADAMTSL3 (ENSACCG00020012570)	SAXO2 (ENSACCG00020012741)	ENSACCG00020012760	EFL1 (ENSACCG00020012793)
Galloanserae	ANCESTRAL SPECIES	10	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Anatidae	DUPLICATION
Anatidae	ANCESTRAL SPECIES	47											ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613.c #22	ENSGT00390000011613.d #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d
Duck	MODERN SPECIES	2	ENSAPLG00000005706	ALPK3 (ENSAPLG00000028618)	ENSAPLG00000005884 #23	ENSAPLG00000006184 #24	ENSAPLG00000025363	ENSAPLG00000026725	ENSAPLG00000024532	ENSAPLG00000000602	ENSAPLG00000002065	OR11L1 (ENSAPLG00000002086)	SPPL2A (ENSAPLG00000014658)	TRPM7 (ENSAPLG00000015254)	USP8 (ENSAPLG00000001449)	GABPB1 (ENSAPLG00000002560)	HDC (ENSAPLG00000002933)	GATM (ENSAPLG00000003331) #22	PDE8A (ENSAPLG00000003946)	FSD2 (ENSAPLG00000004759)	WHAMM (ENSAPLG00000004963)	HOMER2 (ENSAPLG00000005079)	ENSAPLG00000021975	ENSAPLG00000027363	BTBD1 (ENSAPLG00000005398)	TM6SF1 (ENSAPLG00000005660)	HDGFL3 (ENSAPLG00000005715)	BNC1 (ENSAPLG00000005793)	SH3GL3 (ENSAPLG00000005948)	ENSAPLG00000006348	ADAMTSL3 (ENSAPLG00000011192)	SAXO2 (ENSAPLG00000011186)	ENSAPLG00000022974
Pink-footed goose	MODERN SPECIES	54									ENSABRG00000003311	ENSABRG00000003294	SPPL2A (ENSABRG00000003190)	TRPM7 (ENSABRG00000003140)	USP8 (ENSABRG00000003086)	GABPB1 (ENSABRG00000003054)	HDC (ENSABRG00000001689)	ENSABRG00000001566 #22	ENSABRG00000001528 #22	PDE8A (ENSABRG00000001371)	FSD2 (ENSABRG00000001284)	WHAMM (ENSABRG00000001247)	HOMER2 (ENSABRG00000001179)	ENSABRG00000001161	ENSABRG00000001141	BTBD1 (ENSABRG00000001098)	TM6SF1 (ENSABRG00000001021)	HDGFL3 (ENSABRG00000000979)	BNC1 (ENSABRG00000000876)	SH3GL3 (ENSABRG00000000806)	ENSABRG00000000673	ADAMTSL3 (ENSABRG00000000633)	SAXO2 (ENSABRG00000000626)
Anatidae	ANCESTRAL SPECIES	47										ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613.c #22	ENSGT00390000011613.d #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Pink-footed goose	MODERN SPECIES	54								ENSABRG00000003311	ENSABRG00000003294	SPPL2A (ENSABRG00000003190)	TRPM7 (ENSABRG00000003140)	USP8 (ENSABRG00000003086)	GABPB1 (ENSABRG00000003054)	HDC (ENSABRG00000001689)	ENSABRG00000001566 #22	ENSABRG00000001528 #22	PDE8A (ENSABRG00000001371)	FSD2 (ENSABRG00000001284)	WHAMM (ENSABRG00000001247)	HOMER2 (ENSABRG00000001179)	ENSABRG00000001161	ENSABRG00000001141	BTBD1 (ENSABRG00000001098)	TM6SF1 (ENSABRG00000001021)	HDGFL3 (ENSABRG00000000979)	BNC1 (ENSABRG00000000876)	SH3GL3 (ENSABRG00000000806)	ENSABRG00000000673	ADAMTSL3 (ENSABRG00000000633)	SAXO2 (ENSABRG00000000626)	ENSABRG00000000602
Phasianidae	ANCESTRAL SPECIES	11	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Japanese quail	MODERN SPECIES	1	GALK2 (ENSCJPG00005020066)	FGF7 (ENSCJPG00005020071)	DTWD1 (ENSCJPG00005020072)	SPATA5L1 (ENSCJPG00005020074) #21	C15orf48 (ENSCJPG00005020076) #20	SLC30A4 (ENSCJPG00005020078) #19	BLOC1S6 (ENSCJPG00005020079) #18	SQOR (ENSCJPG00005020080) #17	ENSCJPG00005020089	ENSCJPG00005020090	SPPL2A (ENSCJPG00005020091)	TRPM7 (ENSCJPG00005020093)	USP8 (ENSCJPG00005020198)	GABPB1 (ENSCJPG00005020200)	HDC (ENSCJPG00005020202)	GATM (ENSCJPG00005020207) #22	PDE8A (ENSCJPG00005020208)	FSD2 (ENSCJPG00005020212)	WHAMM (ENSCJPG00005020213)	HOMER2 (ENSCJPG00005020214)	ENSCJPG00005020219	ENSCJPG00005020220	BTBD1 (ENSCJPG00005020221)	TM6SF1 (ENSCJPG00005020222)	HDGFL3 (ENSCJPG00005020224)	BNC1 (ENSCJPG00005020227)	SH3GL3 (ENSCJPG00005020230)	ENSCJPG00005020233	ADAMTSL3 (ENSCJPG00005020237)	SAXO2 (ENSCJPG00005020255)	EFL1 (ENSCJPG00005020256)
Phasianidae_b	ANCESTRAL SPECIES	11	ENSGT00490000043356.a	ENSGT00530000063301.a.b	ENSGT00950000183187.A	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00940000171184
Turkey	MODERN SPECIES	3	ENSMGAG00000018690 #9	ENSMGAG00000006751 #9	DUT (ENSMGAG00000006960) #8	FBN1 (ENSMGAG00000006969) #7	CEP152 (ENSMGAG00000007112)	SHC4 (ENSMGAG00000007143)	SECISBP2L (ENSMGAG00000007165)	COPS2 (ENSMGAG00000007200)	GALK2 (ENSMGAG00000007213)	FGF7 (ENSMGAG00000007239)	DTWD1 (ENSMGAG00000007251)	C15orf48 (ENSMGAG00000007267) #20	SLC30A4 (ENSMGAG00000007274) #19	BLOC1S6 (ENSMGAG00000007293) #18	SQOR (ENSMGAG00000007296) #17	ENSMGAG00000007552 #22	ENSMGAG00000007325	SPPL2A (ENSMGAG00000007335)	TRPM7 (ENSMGAG00000007383)	USP8 (ENSMGAG00000007448)	GABPB1 (ENSMGAG00000007495)	HDC (ENSMGAG00000007531)	ENSMGAG00000007592	FSD2 (ENSMGAG00000007666)	HOMER2 (ENSMGAG00000007704)	ENSMGAG00000016131	BTBD1 (ENSMGAG00000007743)	TM6SF1 (ENSMGAG00000007791)	HDGFL3 (ENSMGAG00000007835)	BNC1 (ENSMGAG00000007844)	SH3GL3 (ENSMGAG00000007852)
Chicken	MODERN SPECIES	1	FGF7 (ENSGALG00010016094)	FAM227B (ENSGALG00010016101)	DTWD1 (ENSGALG00010016113)	SPATA5L1 (ENSGALG00010016122) #21	C10H15ORF48 (ENSGALG00010016930) #20	SLC30A4 (ENSGALG00010016931) #19	SQRDL (ENSGALG00010016962) #17	BLOC1S6 (ENSGALG00010017070) #18	ITGB1BP3 (ENSGALG00010017109)	ENSGALG00010017135	SPPL2A (ENSGALG00010017221)	TRPM7 (ENSGALG00010017300)	USP8 (ENSGALG00010017377)	GABPB1 (ENSGALG00010017451)	HDC (ENSGALG00010017510)	GATM (ENSGALG00010017604) #22	PDE8A (ENSGALG00010020912)	FSD2 (ENSGALG00010017656)	WHAMM (ENSGALG00010017658)	HOMER2 (ENSGALG00010016591)	FAM103A1 (ENSGALG00010016607)	ENSGALG00010016620	BTBD1 (ENSGALG00010016643)	TM6SF1 (ENSGALG00010016664)	HDGFL3 (ENSGALG00010016746)	ENSGALG00010016765	BNC1 (ENSGALG00010016769)	SH3GL3 (ENSGALG00010016810)	ADAMTSL3 (ENSGALG00010016874)	ENSGALG00010016888	SAXO2 (ENSGALG00010016899)
African ostrich	MODERN SPECIES	834	DTWD1 (ENSSCUG00000014264)	SPATA5L1 (ENSSCUG00000014260) #21	SLC30A4 (ENSSCUG00000014256) #19	BLOC1S6 (ENSSCUG00000014252) #18	SQOR (ENSSCUG00000014248) #17	ENSSCUG00000014242	ENSSCUG00000014239	SPPL2A (ENSSCUG00000014216)	TRPM7 (ENSSCUG00000014197)	USP50 (ENSSCUG00000014190)	USP8 (ENSSCUG00000014181)	ENSSCUG00000014179	GABPB1 (ENSSCUG00000014173)	HDC (ENSSCUG00000014170)	SLC27A2 (ENSSCUG00000014162)	GATM (ENSSCUG00000014155) #22	PDE8A (ENSSCUG00000014146)	FSD2 (ENSSCUG00000014139)	WHAMM (ENSSCUG00000014136)	HOMER2 (ENSSCUG00000014134)	ENSSCUG00000014131	ENSSCUG00000014129	BTBD1 (ENSSCUG00000014127)	TM6SF1 (ENSSCUG00000014122)	HDGFL3 (ENSSCUG00000014117)	BNC1 (ENSSCUG00000014110)	SH3GL3 (ENSSCUG00000014101)	ENSSCUG00000014090	ADAMTSL3 (ENSSCUG00000014073)	ENSSCUG00000014067	EFL1 (ENSSCUG00000014064)
Australian saltwater crocodile	MODERN SPECIES	31	ENSCPRG00005014657	ATP8B4 (ENSCPRG00005014680)	SPATA5L1 (ENSCPRG00005014904) #21	C15orf48 (ENSCPRG00005014908) #20	SLC30A4 (ENSCPRG00005014914) #19	BLOC1S6 (ENSCPRG00005014919) #18	SQOR (ENSCPRG00005014924) #17	ENSCPRG00005014929	SPPL2A (ENSCPRG00005014945)	TRPM7 (ENSCPRG00005015267)	USP50 (ENSCPRG00005016060)	USP8 (ENSCPRG00005016079)	GABPB1 (ENSCPRG00005016149)	HDC (ENSCPRG00005016158)	SLC27A2 (ENSCPRG00005016163)	GATM (ENSCPRG00005016170) #22	PDE8A (ENSCPRG00005016191)	FSD2 (ENSCPRG00005016209)	WHAMM (ENSCPRG00005016212)	HOMER2 (ENSCPRG00005016216)	ENSCPRG00005016223	BTBD1 (ENSCPRG00005016227)	TM6SF1 (ENSCPRG00005016236)	HDGFL3 (ENSCPRG00005016242)	BNC1 (ENSCPRG00005016251)	SH3GL3 (ENSCPRG00005016257)	ENSCPRG00005016266	ADAMTSL3 (ENSCPRG00005016284)	SAXO2 (ENSCPRG00005016298)	ENSCPRG00005016299	EFL1 (ENSCPRG00005016302)
Cryptodira	ANCESTRAL SPECIES	13	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000172921	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00550000074806
Testudinoidea	ANCESTRAL SPECIES	6	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00550000074806
Emydidae	ANCESTRAL SPECIES	21	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00550000074806
painted turtle	MODERN SPECIES	2428	ATP8B4 (ENSCPBG00000011023)	SPATA5L1 (ENSCPBG00000011438) #21	C15orf48 (ENSCPBG00000011439) #20	SLC30A4 (ENSCPBG00000011442) #19	BLOC1S6 (ENSCPBG00000011446) #18	SQOR (ENSCPBG00000011447) #17	ENSCPBG00000011450	ENSCPBG00000011453	SPPL2A (ENSCPBG00000011455)	TRPM7 (ENSCPBG00000011596)	USP50 (ENSCPBG00000017542)	USP8 (ENSCPBG00000017545)	GABPB1 (ENSCPBG00000017554)	HDC (ENSCPBG00000017556)	SLC27A2 (ENSCPBG00000017561)	GATM (ENSCPBG00000017569) #22	PDE8A (ENSCPBG00000017575)	FSD2 (ENSCPBG00000017580)	WHAMM (ENSCPBG00000017584)	HOMER2 (ENSCPBG00000017592)	ENSCPBG00000017593	C15orf40 (ENSCPBG00000017596)	BTBD1 (ENSCPBG00000017598)	TM6SF1 (ENSCPBG00000017600)	ENSCPBG00000017602	ENSCPBG00000017604	BNC1 (ENSCPBG00000017606)	SH3GL3 (ENSCPBG00000017611)	ENSCPBG00000017613	ADAMTSL3 (ENSCPBG00000017620)	SAXO2 (ENSCPBG00000017634)
Three-toed box turtle	MODERN SPECIES	27	ENSTMTG00000017188	ENSTMTG00000017200	SPATA5L1 (ENSTMTG00000017254) #21	C15orf48 (ENSTMTG00000017267) #20	SLC30A4 (ENSTMTG00000017282) #19	BLOC1S6 (ENSTMTG00000017326) #18	SQOR (ENSTMTG00000017342) #17	ENSTMTG00000017360	SPPL2A (ENSTMTG00000017391)	TRPM7 (ENSTMTG00000017546)	USP50 (ENSTMTG00000018550)	USP8 (ENSTMTG00000018583)	GABPB1 (ENSTMTG00000018609)	HDC (ENSTMTG00000018634)	SLC27A2 (ENSTMTG00000018667)	GATM (ENSTMTG00000018691) #22	PDE8A (ENSTMTG00000018725)	FSD2 (ENSTMTG00000018876)	WHAMM (ENSTMTG00000018907)	HOMER2 (ENSTMTG00000018929)	ENSTMTG00000018956	ENSTMTG00000018966	BTBD1 (ENSTMTG00000018975)	TM6SF1 (ENSTMTG00000019027)	HDGFL3 (ENSTMTG00000019254)	BNC1 (ENSTMTG00000019280)	SH3GL3 (ENSTMTG00000019386)	ENSTMTG00000019420	ENSTMTG00000019528	ADAMTSL3 (ENSTMTG00000019545)	SAXO2 (ENSTMTG00000019643)
Testudinidae	ANCESTRAL SPECIES	3	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00390000012420	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00550000074806
Goode s thornscrub tortoise	MODERN SPECIES	1	SPATA5L1 (ENSGEVG00005019817) #21	ENSGEVG00005019809 #20	SLC30A4 (ENSGEVG00005019801) #19	BLOC1S6 (ENSGEVG00005019795) #18	SQOR (ENSGEVG00005019788) #17	ENSGEVG00005019778	ENSGEVG00005019773	ENSGEVG00005019765	ENSGEVG00005019759	TRPM7 (ENSGEVG00005012812)	USP50 (ENSGEVG00005011334)	USP8 (ENSGEVG00005011194)	GABPB1 (ENSGEVG00005011119)	HDC (ENSGEVG00005011066)	SLC27A2 (ENSGEVG00005010875)	GATM (ENSGEVG00005010821) #22	PDE8A (ENSGEVG00005010317)	FSD2 (ENSGEVG00005010161)	WHAMM (ENSGEVG00005009947)	HOMER2 (ENSGEVG00005009845)	ENSGEVG00005009820	BTBD1 (ENSGEVG00005009767)	TM6SF1 (ENSGEVG00005009728)	HDGFL3 (ENSGEVG00005009699)	BNC1 (ENSGEVG00005009519)	SH3GL3 (ENSGEVG00005009451)	ENSGEVG00005009365	ADAMTSL3 (ENSGEVG00005009066)	SAXO2 (ENSGEVG00005008919)	EFL1 (ENSGEVG00005008676)	MEX3B (ENSGEVG00005008615)
Abingdon island giant tortoise	MODERN SPECIES	1533		ENSCABG00000016022	ENSCABG00000016025	SPATA5L1 (ENSCABG00000016039) #21	SLC30A4 (ENSCABG00000016143) #19	BLOC1S6 (ENSCABG00000016144) #18	SQOR (ENSCABG00000016145) #17	ENSCABG00000016147	SPPL2A (ENSCABG00000016151)	TRPM7 (ENSCABG00000016163)	USP50 (ENSCABG00000017195)	USP8 (ENSCABG00000017201)	GABPB1 (ENSCABG00000017268)	HDC (ENSCABG00000017269)	SLC27A2 (ENSCABG00000017271)	GATM (ENSCABG00000017272) #22	ENSCABG00000017276	ENSCABG00000017280	FSD2 (ENSCABG00000017286)	WHAMM (ENSCABG00000017287)	HOMER2 (ENSCABG00000017291)	ENSCABG00000017292	C15orf40 (ENSCABG00000017293)	BTBD1 (ENSCABG00000017296)	TM6SF1 (ENSCABG00000017387)	HDGFL3 (ENSCABG00000017390)	BNC1 (ENSCABG00000017396)	ENSCABG00000017405	SH3GL3 (ENSCABG00000017406)	ENSCABG00000017410	ADAMTSL3 (ENSCABG00000017422)
Chinese turtle	MODERN SPECIES	2248										ENSPSIG00000017896	USP50 (ENSPSIG00000018029)	ENSPSIG00000018031	GABPB1 (ENSPSIG00000018045)	HDC (ENSPSIG00000018114)	SLC27A2 (ENSPSIG00000005751)	GATM (ENSPSIG00000006047) #22	PDE8A (ENSPSIG00000006401)	FSD2 (ENSPSIG00000006685)	WHAMM (ENSPSIG00000006692)	HOMER2 (ENSPSIG00000006694)	ENSPSIG00000006833	ENSPSIG00000006838	BTBD1 (ENSPSIG00000006934)	TM6SF1 (ENSPSIG00000007151)	HDGFL3 (ENSPSIG00000007220)	BNC1 (ENSPSIG00000007268)	SH3GL3 (ENSPSIG00000007506)	ENSPSIG00000007569	ADAMTSL3 (ENSPSIG00000007706)	SAXO2 (ENSPSIG00000007772)	EFL1 (ENSPSIG00000007790)
Anura	ANCESTRAL SPECIES		ENSGT00390000004624.a.b	ENSGT00940000160101	ENSGT00940000160700 #21	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000159842	ENSGT00940000158245	ENSGT00940000157722	ENSGT00940000157091.a	ENSGT00940000157091.b	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT00940000164952	ENSGT00940000158143	ENSGT00390000007252.d	ENSGT00550000074806
Frog	MODERN SPECIES	3	spata5l1 (ENSXETG00000038441) #21	slc30a4 (ENSXETG00000022040) #19	bloc1s6 (ENSXETG00000022045) #18	sqor (ENSXETG00000022046) #17	nmrk2 (ENSXETG00000022049)	ENSXETG00000034852	cdc42se2 (ENSXETG00000022051)	sppl2a (ENSXETG00000022052)	trpm7 (ENSXETG00000022057)	ENSXETG00000047653	XB5892783 [provisional:trpm7] (ENSXETG00000035125)	usp8 (ENSXETG00000016117)	gabpb1 (ENSXETG00000016116)	hdc (ENSXETG00000019831)	slc27a2 (ENSXETG00000016111)	gatm (ENSXETG00000016109) #22	pde8a (ENSXETG00000016104)	fsd2 (ENSXETG00000016103)	whamm (ENSXETG00000016099)	homer2 (ENSXETG00000016094)	tm6sf1 (ENSXETG00000025132)	c15orf40 (ENSXETG00000006028)	btbd1 (ENSXETG00000016087)	hdgfl3 (ENSXETG00000016086)	bnc1 (ENSXETG00000016084)	sh3gl3 (ENSXETG00000007747)	lmnb3 (ENSXETG00000015792)	adamtsl3 (ENSXETG00000006128)	ENSXETG00000043109	saxo2 (ENSXETG00000025129)	efl1 (ENSXETG00000015701)
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000006841	ENSLLEG00000006966	ENSLLEG00000006994	SPPL2A (ENSLLEG00000007069)	ENSLLEG00000007316	ENSLLEG00000007438	ENSLLEG00000008295	ENSLLEG00000009019	USP8 (ENSLLEG00000009062)	ENSLLEG00000009344	GABPB1 (ENSLLEG00000009418)	HDC (ENSLLEG00000010063)	ENSLLEG00000010342	ENSLLEG00000010491	ENSLLEG00000010987	GATM (ENSLLEG00000011091) #22	PDE8A (ENSLLEG00000011255)	ENSLLEG00000011795	ENSLLEG00000011814	ENSLLEG00000011870	ENSLLEG00000011910	WHAMM (ENSLLEG00000011929)	HOMER2 (ENSLLEG00000012024)	ENSLLEG00000012178	ENSLLEG00000012232	TM6SF1 (ENSLLEG00000012320)	HDGFL3 (ENSLLEG00000012483)	ENSLLEG00000012622	ENSLLEG00000012657	BNC1 (ENSLLEG00000012684)	ENSLLEG00000012723
Coelacanth	MODERN SPECIES	269								TRPM7 (ENSLACG00000018358)	ENSLACG00000022650	USP50 (ENSLACG00000022208)	USP8 (ENSLACG00000018295)	GABPB1 (ENSLACG00000018253)	HDC (ENSLACG00000018205)	SLC27A2 (ENSLACG00000018170)	ENSLACG00000018162	GATM (ENSLACG00000018140) #22	PDE8A (ENSLACG00000018003)	FSD2 (ENSLACG00000017964)	WHAMM (ENSLACG00000017931)	HOMER2 (ENSLACG00000017843)	ENSLACG00000017822	ENSLACG00000017810	zgc:193812 (ENSLACG00000017770)	ENSLACG00000017654	TM6SF1 (ENSLACG00000017623)	HDGFL3 (ENSLACG00000017575)	BNC1 (ENSLACG00000017528)	SH3GL3 (ENSLACG00000017223)	ENSLACG00000017205	ENSLACG00000017162	ADAMTSL3 (ENSLACG00000016634)
Actinopterygii	ANCESTRAL SPECIES	18	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000157722	ENSGT00940000157091	ENSGT00390000010440	ENSGT00940000177451	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000161137	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000168316	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT01090000260005.a.b.b
Neopterygii	ANCESTRAL SPECIES	11	ENSGT00940000160101	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398	ENSGT01090000260005.a.b.b	ENSGT00940000159206.b
Osteoglossocephalai	ANCESTRAL SPECIES	10	ENSGT00940000160101	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00390000019406 #17	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000164795	ENSGT00390000010463.b	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398.i.a	ENSGT01090000260005.a.b.b	ENSGT00940000159206.b
Osteoglossiformes	ANCESTRAL SPECIES	13		ENSGT00940000159843.a	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160101.a	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545.b #19	ENSGT00940000159842.wc	ENSGT00940000157091.i	ENSGT00940000157542	ENSGT00940000157875.a	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422.a	ENSGT00510000047412.b	ENSGT00510000046704.b.b	ENSGT00940000157324.a	ENSGT00390000010463.b	ENSGT00390000012913.b	ENSGT00390000005844.a.a.d.a	ENSGT00940000157398.i.a	ENSGT01090000260005.a.b.b	ENSGT00940000159206.b	ENSGT00940000164952	ENSGT00940000158143.bb.b	ENSGT00390000007252.d	ENSGT00550000074806	ENSGT00940000160013.d
P. kingsleyae	MODERN SPECIES	14	dtwd1 (ENSPKIG00000020145)	ENSPKIG00000020109	ATP8B4 (ENSPKIG00000020020)	spata5l1 (ENSPKIG00000019971) #21	zgc:153317 (ENSPKIG00000019958) #20	slc30a4 (ENSPKIG00000019931) #19	NMRK2 (ENSPKIG00000019908)	ENSPKIG00000019883	trpm7 (ENSPKIG00000019818)	USP8 (ENSPKIG00000019742)	gabpb1 (ENSPKIG00000019705)	ENSPKIG00000019693	hdc (ENSPKIG00000019642)	ENSPKIG00000019612	ENSPKIG00000019594	gatm (ENSPKIG00000019560) #22	pde8a (ENSPKIG00000019448)	ENSPKIG00000019387	WHAMM (ENSPKIG00000019349)	HOMER2 (ENSPKIG00000019278)	ENSPKIG00000019209	TM6SF1 (ENSPKIG00000019182)	BNC1 (ENSPKIG00000019153)	sh3gl3a (ENSPKIG00000019090)	gjd6 (ENSPKIG00000019048)	ENSPKIG00000018976	lmnl3 (ENSPKIG00000018883)	ENSPKIG00000018838	ENSPKIG00000018811	ENSPKIG00000018794	ENSPKIG00000018777
Asian bonytongue	MODERN SPECIES	2	FGF7 (ENSSFOG00015013548)	dtwd1 (ENSSFOG00015013665)	ENSSFOG00015013602	ATP8B4 (ENSSFOG00015013706)	spata5l1 (ENSSFOG00015013907) #21	ENSSFOG00015029255 #20	slc30a4 (ENSSFOG00015013936) #19	NMRK2 (ENSSFOG00015013954)	ENSSFOG00015013971	trpm7 (ENSSFOG00015014022)	USP8 (ENSSFOG00015014211)	gabpb1 (ENSSFOG00015014308)	hdc (ENSSFOG00015014342)	slc27a2a (ENSSFOG00015014467)	SLC27A2 (ENSSFOG00015015329)	gatm (ENSSFOG00015015354) #22	pde8a (ENSSFOG00015015418)	ENSSFOG00015015618	WHAMM (ENSSFOG00015015669)	HOMER2 (ENSSFOG00015015742)	ENSSFOG00015027901	TM6SF1 (ENSSFOG00015015912)	BNC1 (ENSSFOG00015015932)	sh3gl3a (ENSSFOG00015015962)	gjd6 (ENSSFOG00015016045)	MARCHF3 (ENSSFOG00015016056)	lmnl3 (ENSSFOG00015016091)	ADAMTSL3 (ENSSFOG00015016182)	saxo2 (ENSSFOG00015016210)	EFL1 (ENSSFOG00015016244)	MEX3B (ENSSFOG00015033205)
Clupeocephala	ANCESTRAL SPECIES	55	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398.i.a	ENSGT01090000260005.a.b.b	ENSGT00940000159206.b	ENSGT00940000164952	ENSGT00940000158143
Otomorpha	ANCESTRAL SPECIES	47	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000167699
Clupeiformes	ANCESTRAL SPECIES	44	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756.g	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT01060000248998	ENSGT01030000235336	ENSGT01030000235123	ENSGT00940000154706.rb.a	ENSGT00940000154688.a.a
Denticle herring	MODERN SPECIES	7	spata5l1 (ENSDCDG00000034686) #21	zgc:153317 (ENSDCDG00000034684) #20	slc30a4 (ENSDCDG00000034681) #19	bloc1s6 (ENSDCDG00000034679) #18	mibp2 (ENSDCDG00000034675)	ENSDCDG00000034671	SPPL2A (ENSDCDG00000034664)	trpm7 (ENSDCDG00000032159)	USP8 (ENSDCDG00000031420)	gabpb1 (ENSDCDG00000031385)	hdc (ENSDCDG00000030901)	slc27a2a (ENSDCDG00000030799)	ENSDCDG00000030474	ENSDCDG00000029976	ENSDCDG00000029816	gatm (ENSDCDG00000029807) #22	pde8a (ENSDCDG00000029146)	ENSDCDG00000029124	FSD2 (ENSDCDG00000029121)	WHAMM (ENSDCDG00000029117)	HOMER2 (ENSDCDG00000029113)	RAMAC (ENSDCDG00000029111)	nap1l4b (ENSDCDG00000029103)	cars1 (ENSDCDG00000028076)	SBF2 (ENSDCDG00000022757)	adma (ENSDCDG00000022641)	ENSDCDG00000022640	ENSDCDG00000022639	mob2b (ENSDCDG00000031645)	DUSP8 (ENSDCDG00000031643)	PTPN5 (ENSDCDG00000031636)
Atlantic herring	MODERN SPECIES	22	CTXN2 (ENSCHAG00000027094) #10	SLC12A1 (ENSCHAG00000026896) #9	dut (ENSCHAG00000026861) #8	FBN1 (ENSCHAG00000026378) #7	SHC4 (ENSCHAG00000026318)	SECISBP2L (ENSCHAG00000026315)	fgf7 (ENSCHAG00000026314)	trpm7 (ENSCHAG00000025138)	USP50 (ENSCHAG00000024971)	USP8 (ENSCHAG00000024764)	gabpb1 (ENSCHAG00000024666)	hdc (ENSCHAG00000024348)	slc27a2a (ENSCHAG00000024270)	ENSCHAG00000024250	ENSCHAG00000023685	gatm (ENSCHAG00000023628) #22	pde8a (ENSCHAG00000022667)	ENSCHAG00000022594	FSD2 (ENSCHAG00000022583)	WHAMM (ENSCHAG00000022574)	HOMER2 (ENSCHAG00000022545)	RAMAC (ENSCHAG00000022537)	BTBD1 (ENSCHAG00000022510)	TM6SF1 (ENSCHAG00000022465)	HDGFL3 (ENSCHAG00000022405)	BNC1 (ENSCHAG00000022380)	dnaja2a (ENSCHAG00000022281)	oaz2b (ENSCHAG00000022246)	rbpms2b (ENSCHAG00000022237)	cpeb1b (ENSCHAG00000021921)	ENSCHAG00000021126
Otophysi	ANCESTRAL SPECIES	76	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000157947.a.b	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00940000168079	ENSGT00940000156756	ENSGT00390000012913.b
Characiphysae	ANCESTRAL SPECIES	125	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938.s	ENSGT00940000164068.a.b.b	ENSGT00940000157947.a.b	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00940000168079	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b
Channel catfish	MODERN SPECIES	23	cyp19a1a (ENSIPUG00000017676)	ENSIPUG00000017656	ENSIPUG00000017632	ENSIPUG00000017615	ENSIPUG00000017604	ENSIPUG00000017575	mibp2 (ENSIPUG00000017560)	cdc42se2 (ENSIPUG00000017541)	sppl2a (ENSIPUG00000017501)	trpm7 (ENSIPUG00000017419)	USP8 (ENSIPUG00000017369)	gabpb1 (ENSIPUG00000017273)	hdc (ENSIPUG00000017191)	SLC27A2 (ENSIPUG00000017159)	ENSIPUG00000017141	ENSIPUG00000017134 #22	pde8a (ENSIPUG00000017054)	ENSIPUG00000017011	fsd2 (ENSIPUG00000017001)	ENSIPUG00000016990	homer2 (ENSIPUG00000016976)	ENSIPUG00000016949	tm6sf1 (ENSIPUG00000016918)	HDGFL3 (ENSIPUG00000016897)	BNC1 (ENSIPUG00000016867)	ENSIPUG00000016852	ENSIPUG00000016841	ENSIPUG00000016833	ENSIPUG00000016813	arpp19a (ENSIPUG00000016806)	MYO5A (ENSIPUG00000016577)
Characiphysae_b	ANCESTRAL SPECIES	128	ENSGT00940000159843	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00940000159842	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938.s	ENSGT00940000164068.a.b.b	ENSGT00940000157947.a.b	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00940000168079	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b
Electric eel	MODERN SPECIES	143															zgc:158482 (ENSEEEG00000018364)	gatm (ENSEEEG00000018363) #22	pde8a (ENSEEEG00000018362)	ENSEEEG00000018360	FSD2 (ENSEEEG00000018359)	ENSEEEG00000018358	homer2 (ENSEEEG00000018350)	ENSEEEG00000018347	BTBD1 (ENSEEEG00000018341)	TM6SF1 (ENSEEEG00000018338)	HDGFL3 (ENSEEEG00000018337)	BNC1 (ENSEEEG00000018332)	acadl (ENSEEEG00000018326)	tnfaip8l3 (ENSEEEG00000018325)	cyp19a1a (ENSEEEG00000015657)	gldn (ENSEEEG00000015576)	dmxl2 (ENSEEEG00000015572)
Characoidei	ANCESTRAL SPECIES	456															ENSGT00940000157947.a.b	ENSGT00390000011613 #22	ENSGT00940000156422
Mexicana tetra	MODERN SPECIES	614									ENSAMXG00000040601	homer2 (ENSAMXG00000029601)	ENSAMXG00000034573	FSD2 (ENSAMXG00000043145)	ENSAMXG00000001167	ENSAMXG00000041106	zgc:158482 (ENSAMXG00000031817)	gatm (ENSAMXG00000008299) #22	pde8a (ENSAMXG00000041948)	slc27a2a (ENSAMXG00000033051)	hdc (ENSAMXG00000041840)	gabpb1 (ENSAMXG00000039169)	USP8 (ENSAMXG00000041256)	ENSAMXG00000038145	trpm7 (ENSAMXG00000040086)	ENSAMXG00000033315	SPPL2A (ENSAMXG00000011067)	ENSAMXG00000035375	mibp2 (ENSAMXG00000040660)	bloc1s6 (ENSAMXG00000029463) #18	slc30a4 (ENSAMXG00000043270) #19	zgc:153317 (ENSAMXG00000042391) #20	spata5l1 (ENSAMXG00000031455) #21
Red-bellied piranha	MODERN SPECIES	1314														ENSPNAG00000008487	zgc:158482 (ENSPNAG00000008450)	gatm (ENSPNAG00000008388) #22
Cyprinoidei	ANCESTRAL SPECIES	143	ENSGT00940000153766.B	ENSGT00390000004624.a.b	ENSGT00940000160700 #21	ENSGT00390000009277 #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00940000159842	ENSGT00940000158245.dc	ENSGT00940000157722	ENSGT00940000157091	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000157947.a.b	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324
Cyprininae	ANCESTRAL SPECIES	431	ENSGT00390000009277.g #20	ENSGT00940000153766.B.k.b	ENSGT00390000009277.h #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00940000159842.sc	ENSGT00940000159842.rc.a	ENSGT00940000158245.dc	ENSGT00940000157722.h	ENSGT00940000157091.l	ENSGT00940000157091.k	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000157947.a.b	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324.d.b	ENSGT00940000153942.b.l
Cyprininae_a	ANCESTRAL SPECIES	325	ENSGT00940000159843.e	ENSGT00940000153766.B.k.b	ENSGT00390000009277.h #20	ENSGT00940000157545 #19	ENSGT00510000047812 #18	ENSGT00940000159842.rc.a	ENSGT00940000158245.dc	ENSGT00940000157722.h	ENSGT00940000157091.l	ENSGT00940000157091.k	ENSGT00940000157542	ENSGT00940000157875	ENSGT00940000157938	ENSGT00940000157947.a.b	ENSGT00940000164068.a.b.b	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324.d.b	ENSGT00940000153942.b.l	ENSGT00390000005844.a.a.fd.a
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	200	CTXN2 (ENSSGRG00000048949) #10	ENSSGRG00000048950 #9	dut (ENSSGRG00000048952) #8	ENSSGRG00000048958	fgf7 (ENSSGRG00000048959)	dtwd1 (ENSSGRG00000048960)	spata5l1 (ENSSGRG00000048963) #21	zgc:153317 (ENSSGRG00000048964) #20	slc30a4 (ENSSGRG00000048965) #19	bloc1s6 (ENSSGRG00000048966) #18	mibp2 (ENSSGRG00000048967)	mibp2 (ENSSGRG00000048968)	ENSSGRG00000048969	trpm7 (ENSSGRG00000049002)	gabpb1 (ENSSGRG00000049305)	gatm (ENSSGRG00000049307) #22	pde8a (ENSSGRG00000049322)	ENSSGRG00000049329	WHAMM (ENSSGRG00000049336)	homer2 (ENSSGRG00000049341)	HDGFL3 (ENSSGRG00000049347)	ENSSGRG00000049348
Golden-line barbel	MODERN SPECIES	1395										trpm7 (ENSSGRG00000028244)	USP8 (ENSSGRG00000028568)	gabpb1 (ENSSGRG00000028570)	hdc (ENSSGRG00000028573)	hdc (ENSSGRG00000028574)	zgc:158482 (ENSSGRG00000028578)	gatm (ENSSGRG00000028615) #22	pde8a (ENSSGRG00000028617)	ENSSGRG00000028703	homer2 (ENSSGRG00000028704)	ENSSGRG00000028726
Common carp reference	MODERN SPECIES	19	dut (ENSCCRG00000010105) #8	ENSCCRG00000081561 #7	SECISBP2L (ENSCCRG00000033388)	fgf7 (ENSCCRG00000066176)	dtwd1 (ENSCCRG00000016304)	slc30a4 (ENSCCRG00000076898) #19	zgc:153317 (ENSCCRG00000044187) #20	bloc1s6 (ENSCCRG00000015224) #18	mibp2 (ENSCCRG00000072914)	ENSCCRG00000076045	trpm7 (ENSCCRG00000035964)	SPPL2A (ENSCCRG00000009471)	USP8 (ENSCCRG00000069890)	gabpb1 (ENSCCRG00000014831)	slc27a2a (ENSCCRG00000021357)	gatm (ENSCCRG00000027820) #22	pde8a (ENSCCRG00000056992)	WHAMM (ENSCCRG00000052466)	homer2 (ENSCCRG00000008463)	HDGFL3 (ENSCCRG00000073324)	ENSCCRG00000052234
Goldfish	DUPLICATION
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	37	ENSCARG00000020494	ENSCARG00000020483	mibp2 (ENSCARG00000020468)	ENSCARG00000020463	zgc:153317 (ENSCARG00000020447) #20	spata5l1 (ENSCARG00000020437) #21	ENSCARG00000018850	fgf7 (ENSCARG00000018796)	SECISBP2L (ENSCARG00000018785)	bloc1s6 (ENSCARG00000018764) #18	ENSCARG00000018743 #7	ENSCARG00000018674	ENSCARG00000057191	hdc (ENSCARG00000057074)	zgc:158482 (ENSCARG00000057022)	gatm (ENSCARG00000056905) #22	pde8a (ENSCARG00000056736)	ENSCARG00000056674
Goldfish	MODERN SPECIES	9	pard6a (ENSCARG00000026658)	ranbp10 (ENSCARG00000026694)	tsnaxip1 (ENSCARG00000027094)	nutf2 (ENSCARG00000027109)	edc4 (ENSCARG00000027166)	NRN1L (ENSCARG00000028199)	pskh1 (ENSCARG00000028209)	fan1 (ENSCARG00000028223)	mbtps1 (ENSCARG00000028403)	SLC38A8 (ENSCARG00000030978)	necab2 (ENSCARG00000031006)	trpm7 (ENSCARG00000002058)	USP8 (ENSCARG00000002303)	hdc (ENSCARG00000002388)	zgc:158482 (ENSCARG00000002690)	gatm (ENSCARG00000002711) #22	ENSCARG00000002730	ENSCARG00000002733	ENSCARG00000002734	snrpa (ENSCARG00000002745)	zgc:153119 (ENSCARG00000002762)	itpkcb (ENSCARG00000002768)	ryr1b (ENSCARG00000003067)	rasgrp4 (ENSCARG00000006386)	HNRNPUL1 (ENSCARG00000006475)	opa3 (ENSCARG00000006723)	ppp1r13l (ENSCARG00000006738)	TMEM91 (ENSCARG00000006747)	exosc5 (ENSCARG00000006758)	bckdha (ENSCARG00000006788)	b3gat1a (ENSCARG00000006814)
Goldfish	MODERN SPECIES	9	larp6a (ENSCARG00000002513)	CTXN2 (ENSCARG00000002518) #10	dut (ENSCARG00000002810) #8	SECISBP2L (ENSCARG00000003027)	fgf7 (ENSCARG00000003047)	dtwd1 (ENSCARG00000003063)	zgc:153317 (ENSCARG00000003072) #20	slc30a4 (ENSCARG00000003080) #19	mibp2 (ENSCARG00000003091)	ENSCARG00000003108	SPPL2A (ENSCARG00000003142)	trpm7 (ENSCARG00000003284)	ENSCARG00000003442	gabpb1 (ENSCARG00000003457)	slc27a2a (ENSCARG00000003465)	gatm (ENSCARG00000003508) #22	pde8a (ENSCARG00000003538)	WHAMM (ENSCARG00000003565)	homer2 (ENSCARG00000003575)	ENSCARG00000003588	HDGFL3 (ENSCARG00000003594)	BNC1 (ENSCARG00000003601)	PARP6 (ENSCARG00000003642)	pkma (ENSCARG00000004076)	dhdh.2 (ENSCARG00000004502)	CELF6 (ENSCARG00000004579)	dhdh.1 (ENSCARG00000004684)	capn5a (ENSCARG00000004746)	dcun1d5 (ENSCARG00000004974)	serp1 (ENSCARG00000005005)	LRCH3 (ENSCARG00000005054)
Zebrafish	MODERN SPECIES	9	wtip (ENSDARG00000103607)	gpib (ENSDARG00000103826)	ENSDARG00000102796	GARRE1 (ENSDARG00000105288)	ss18l2 (ENSDARG00000101085)	lsm14ab (ENSDARG00000100553)	ENSDARG00000092774	tm2d3 (ENSDARG00000076618)	larp6a (ENSDARG00000005355)	trpm7 (ENSDARG00000036232)	USP8 (ENSDARG00000063719)	gabpb1 (ENSDARG00000023659)	hdc (ENSDARG00000075454)	slc27a2a (ENSDARG00000036237)	zgc:158482 (ENSDARG00000067520)	gatm (ENSDARG00000036239) #22	pde8a (ENSDARG00000087941)	ENSDARG00000103011	homer2 (ENSDARG00000059349)
Euteleosteomorpha	ANCESTRAL SPECIES	51	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000153942.b	ENSGT00390000005844.a.a	ENSGT00940000157398.i.a	ENSGT01090000260005.a.b.b	ENSGT00940000159206.b	ENSGT00940000164952	ENSGT00940000158143
Acanthomorphata	ANCESTRAL SPECIES	105	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A
Euacanthomorphacea	ANCESTRAL SPECIES	25	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000161181.c	ENSGT00940000157355.c
Pinecone sodierfish	MODERN SPECIES	17	polr2l (ENSMMDG00005000150)	CPSF7 (ENSMMDG00005000159)	sdhaf2 (ENSMMDG00005000174)	syt7b (ENSMMDG00005000192)	saa (ENSMMDG00005000208)	saa (ENSMMDG00005000214)	saa (ENSMMDG00005000222)	tmod2 (ENSMMDG00005000252)	leo1 (ENSMMDG00005000296)	mapk6 (ENSMMDG00005000307)	USP50 (ENSMMDG00005000320)	USP8 (ENSMMDG00005000391)	hdc (ENSMMDG00005000553)	slc27a2a (ENSMMDG00005002197)	ENSMMDG00005002492	gatm (ENSMMDG00005002819) #22	pde8a (ENSMMDG00005002907)	ENSMMDG00005004292	FSD2 (ENSMMDG00005004308)	WHAMM (ENSMMDG00005004322)	homer2 (ENSMMDG00005004343)	RAMAC (ENSMMDG00005004357)	BTBD1 (ENSMMDG00005004374)	TM6SF1 (ENSMMDG00005004488)	ZRSR2 (ENSMMDG00005004508)	ap1s2 (ENSMMDG00005004533)	ENSMMDG00005004596	ppef1 (ENSMMDG00005004614)	ENSMMDG00005004627	cdkl5 (ENSMMDG00005004643)	ENSMMDG00005004675
Percomorphaceae	ANCESTRAL SPECIES	15	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000161181.c	ENSGT00940000157355.c
Tiger tail seahorse	MODERN SPECIES	348	sema6dl (ENSHCOG00000001615) #14	dmxl2 (ENSHCOG00000001569)	gldn (ENSHCOG00000001538)	cyp19a1a (ENSHCOG00000001526)	tnfaip8l3 (ENSHCOG00000001518)	scg3 (ENSHCOG00000001502)	lysmd2 (ENSHCOG00000001488)	tmod2 (ENSHCOG00000001479)	leo1 (ENSHCOG00000001464)	mapk6 (ENSHCOG00000001456)	USP50 (ENSHCOG00000001443)	USP8 (ENSHCOG00000001428)	hdc (ENSHCOG00000021012)	slc27a2a (ENSHCOG00000020884)	ENSHCOG00000020878	gatm (ENSHCOG00000020850) #22	pde8a (ENSHCOG00000020827)	ENSHCOG00000020785	FSD2 (ENSHCOG00000020768)	WHAMM (ENSHCOG00000020763)	HOMER2 (ENSHCOG00000020729)	ENSHCOG00000020696	RAMAC (ENSHCOG00000000556)	BTBD1 (ENSHCOG00000020685)	TM6SF1 (ENSHCOG00000020669)	ZRSR2 (ENSHCOG00000020661)	ap1s2 (ENSHCOG00000020643)	PHKA2 (ENSHCOG00000020629)	ppef1 (ENSHCOG00000020577)	rs1a (ENSHCOG00000020541)	ENSHCOG00000020528
Percomorphaceae_B	ANCESTRAL SPECIES	12	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT01000000220501	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000161181.c
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT01000000220501	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000161181.c
Percomorphaceae_D	ANCESTRAL SPECIES	11	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00940000166817	ENSGT01000000220501	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000161181.c
Anabantaria	ANCESTRAL SPECIES	11	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c	ENSGT00940000159407.q
Anabantoidei	ANCESTRAL SPECIES	8	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000157334	ENSGT00940000157355.c	ENSGT00940000159407.q
Climbing perch	MODERN SPECIES	16	sema6dl (ENSATEG00000017659) #14	dmxl2 (ENSATEG00000017438)	gldn (ENSATEG00000017422)	cyp19a1a (ENSATEG00000017392)	tnfaip8l3 (ENSATEG00000017365)	scg3 (ENSATEG00000017352)	lysmd2 (ENSATEG00000017347)	tmod2 (ENSATEG00000017316)	ENSATEG00000017300	mapk6 (ENSATEG00000017234)	USP50 (ENSATEG00000017201)	ENSATEG00000017188	hdc (ENSATEG00000017150)	slc27a2a (ENSATEG00000017134)	ENSATEG00000017088	gatm (ENSATEG00000017058) #22	pde8a (ENSATEG00000016933)	ENSATEG00000025699	ENSATEG00000016862	WHAMM (ENSATEG00000016846)	homer2 (ENSATEG00000016830)	RAMAC (ENSATEG00000016819)	BTBD1 (ENSATEG00000016780)	TM6SF1 (ENSATEG00000016763)	ENSATEG00000025875	ENSATEG00000016735	ENSATEG00000016521	ENSATEG00000016469	PPEF1 (ENSATEG00000016433)	ENSATEG00000016415	cdkl5 (ENSATEG00000016371)
Siamese fighting fish	MODERN SPECIES	14		dmxl2 (ENSBSLG00000004472)	gldn (ENSBSLG00000004340)	cyp19a1a (ENSBSLG00000004284)	tnfaip8l3 (ENSBSLG00000004280)	scg3 (ENSBSLG00000004273)	lysmd2 (ENSBSLG00000004267)	tmod2 (ENSBSLG00000004212)	leo1 (ENSBSLG00000004159)	mapk6 (ENSBSLG00000004144)	USP50 (ENSBSLG00000004132)	USP8 (ENSBSLG00000003855)	hdc (ENSBSLG00000003221)	slc27a2a (ENSBSLG00000003205)	ENSBSLG00000003193	gatm (ENSBSLG00000003189) #22	pde8a (ENSBSLG00000002693)	ENSBSLG00000002349	ENSBSLG00000002313	WHAMM (ENSBSLG00000002284)	homer2 (ENSBSLG00000002210)	RAMAC (ENSBSLG00000001912)	BTBD1 (ENSBSLG00000001833)	TM6SF1 (ENSBSLG00000001823)	ZRSR2 (ENSBSLG00000001814)	ap1s2 (ENSBSLG00000001793)	ENSBSLG00000001788	PHKA2 (ENSBSLG00000001403)	ppef1 (ENSBSLG00000000919)	ENSBSLG00000000903	cdkl5 (ENSBSLG00000000880)
Zig-zag eel	MODERN SPECIES	17	ENSMAMG00000011368	dmxl2 (ENSMAMG00000011273)	gldn (ENSMAMG00000011254)	cyp19a1a (ENSMAMG00000011245)	tnfaip8l3 (ENSMAMG00000025301)	scg3 (ENSMAMG00000011230)	lysmd2 (ENSMAMG00000011220)	tmod2 (ENSMAMG00000011188)	leo1 (ENSMAMG00000011168)	mapk6 (ENSMAMG00000011149)	ENSMAMG00000011122	ENSMAMG00000011073	ENSMAMG00000011066	ENSMAMG00000011048	ENSMAMG00000011023	gatm (ENSMAMG00000010991) #22	pde8a (ENSMAMG00000010958)	ENSMAMG00000010931	FSD2 (ENSMAMG00000010882)	WHAMM (ENSMAMG00000010873)	homer2 (ENSMAMG00000010853)	RAMAC (ENSMAMG00000010845)	BTBD1 (ENSMAMG00000010819)	TM6SF1 (ENSMAMG00000010807)	ENSMAMG00000010779	ENSMAMG00000010759	PHKA2 (ENSMAMG00000010670)	ppef1 (ENSMAMG00000010651)	ENSMAMG00000010639	cdkl5 (ENSMAMG00000010484)	SCML2 (ENSMAMG00000010470)
Carangaria	ANCESTRAL SPECIES	11	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT01000000220501	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000161181.c	ENSGT00940000157355.c
Pleuronectoidei	ANCESTRAL SPECIES	10	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT01000000220501	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c
Turbot	MODERN SPECIES	17	sema6dl (ENSSMAG00000021276) #14	dmxl2 (ENSSMAG00000021275)	gldn (ENSSMAG00000021274)	cyp19a1a (ENSSMAG00000014538)	tnfaip8l3 (ENSSMAG00000036688)	scg3 (ENSSMAG00000014287)	lysmd2 (ENSSMAG00000014268)	tmod2 (ENSSMAG00000014241)	leo1 (ENSSMAG00000014228)	mapk6 (ENSSMAG00000014205)	ENSSMAG00000014197	ENSSMAG00000014186	hdc (ENSSMAG00000014150)	slc27a2a (ENSSMAG00000014132)	ENSSMAG00000014127	gatm (ENSSMAG00000014093) #22	pde8a (ENSSMAG00000014068)	ENSSMAG00000013994	FSD2 (ENSSMAG00000013983)	WHAMM (ENSSMAG00000013975)	homer2 (ENSSMAG00000013939)	ENSSMAG00000013934	BTBD1 (ENSSMAG00000013911)	TM6SF1 (ENSSMAG00000013892)	ENSSMAG00000013874	ENSSMAG00000025910	ENSSMAG00000013858	PHKA2 (ENSSMAG00000013655)	ppef1 (ENSSMAG00000013627)	ENSSMAG00000013605	cdkl5 (ENSSMAG00000013472)
Tongue sole	MODERN SPECIES	15	tmem208 (ENSCSEG00000012613)	SMAD6 (ENSCSEG00000012602)	SMAD3 (ENSCSEG00000012585)	map2k5 (ENSCSEG00000012573)	ccnd1 (ENSCSEG00000012564)	vstm2b (ENSCSEG00000012557)	scg3 (ENSCSEG00000012546)	lysmd2 (ENSCSEG00000012539)	tmod2 (ENSCSEG00000012523)	leo1 (ENSCSEG00000012502)	mapk6 (ENSCSEG00000012488)	ENSCSEG00000012481	USP8 (ENSCSEG00000012449)	hdc (ENSCSEG00000010006)	slc27a2a (ENSCSEG00000009981)	gatm (ENSCSEG00000009953) #22	pde8a (ENSCSEG00000009892)	ENSCSEG00000009860	FSD2 (ENSCSEG00000009849)	homer2 (ENSCSEG00000009815)	RAMAC (ENSCSEG00000009800)	ENSCSEG00000009786	BTBD1 (ENSCSEG00000009763)	TM6SF1 (ENSCSEG00000009726)	ZRSR2 (ENSCSEG00000009682)	ap1s2 (ENSCSEG00000009663)	PHKA2 (ENSCSEG00000009624)	ppef1 (ENSCSEG00000009602)	ENSCSEG00000009585	cdkl5 (ENSCSEG00000009558)	SCML2 (ENSCSEG00000009536)
Carangaria_A	ANCESTRAL SPECIES	19	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT01000000220501	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000164218	ENSGT00940000159830	ENSGT00940000161181.c
Seriola	ANCESTRAL SPECIES	30		ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183152.A	ENSGT00390000012913.b	ENSGT00940000165890	ENSGT00940000157369.b	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.A.a.h
Greater amberjack	MODERN SPECIES	3		dmxl2 (ENSSDUG00000003667)	gldn (ENSSDUG00000003629)	cyp19a1a (ENSSDUG00000003606)	tnfaip8l3 (ENSSDUG00000003597)	scg3 (ENSSDUG00000003574)	lysmd2 (ENSSDUG00000003541)	tmod2 (ENSSDUG00000003503)	leo1 (ENSSDUG00000003483)	mapk6 (ENSSDUG00000003444)	USP50 (ENSSDUG00000003425)	USP8 (ENSSDUG00000003393)	hdc (ENSSDUG00000003241)	slc27a2a (ENSSDUG00000003195)	ENSSDUG00000003186	gatm (ENSSDUG00000003160) #22	pde8a (ENSSDUG00000003079)	ENSSDUG00000003044	FSD2 (ENSSDUG00000002921)	WHAMM (ENSSDUG00000002890)	homer2 (ENSSDUG00000002857)	RAMAC (ENSSDUG00000002843)	BTBD1 (ENSSDUG00000002814)	ap1s2 (ENSSDUG00000002801)	ZRSR2 (ENSSDUG00000002784)	TM6SF1 (ENSSDUG00000002771)	crybgx (ENSSDUG00000002750)	lctla (ENSSDUG00000002714)	tipin (ENSSDUG00000002701)	dis3l (ENSSDUG00000002630)	ENSSDUG00000002599
Yellowtail amberjack	MODERN SPECIES	2798		dmxl2 (ENSSLDG00000011135)	gldn (ENSSLDG00000011076)	cyp19a1a (ENSSLDG00000011037)	tnfaip8l3 (ENSSLDG00000011020)	scg3 (ENSSLDG00000010953)	lysmd2 (ENSSLDG00000010930)	tmod2 (ENSSLDG00000010883)	leo1 (ENSSLDG00000010803)	mapk6 (ENSSLDG00000010745)	USP50 (ENSSLDG00000010708)	USP8 (ENSSLDG00000010574)	hdc (ENSSLDG00000010482)	slc27a2a (ENSSLDG00000010432)	ENSSLDG00000010403	gatm (ENSSLDG00000010359) #22	pde8a (ENSSLDG00000010194)	ENSSLDG00000010060	FSD2 (ENSSLDG00000010016)	WHAMM (ENSSLDG00000009986)	homer2 (ENSSLDG00000009970)	HOMER2 (ENSSLDG00000009944)	RAMAC (ENSSLDG00000009924)	BTBD1 (ENSSLDG00000009893)	ap1s2 (ENSSLDG00000009877)	ENSSLDG00000009759	TM6SF1 (ENSSLDG00000009722)	crybgx (ENSSLDG00000009695)	lctla (ENSSLDG00000009618)	tipin (ENSSLDG00000009591)	dis3l (ENSSLDG00000009525)
Barramundi perch	MODERN SPECIES	96	ENSLCAG00010004382	sema6dl (ENSLCAG00010004441) #14	dmxl2 (ENSLCAG00010004591)	cyp19a1a (ENSLCAG00010004693)	tnfaip8l3 (ENSLCAG00010004733)	scg3 (ENSLCAG00010004735)	lysmd2 (ENSLCAG00010004741)	tmod2 (ENSLCAG00010004750)	leo1 (ENSLCAG00010004765)	mapk6 (ENSLCAG00010004774)	USP50 (ENSLCAG00010004782)	USP8 (ENSLCAG00010004793)	hdc (ENSLCAG00010004811)	slc27a2a (ENSLCAG00010004818)	ENSLCAG00010004829	gatm (ENSLCAG00010004861) #22	pde8a (ENSLCAG00010004887)	ENSLCAG00010004942	ENSLCAG00010004951	WHAMM (ENSLCAG00010004960)	HOMER2 (ENSLCAG00010004968)	RAMAC (ENSLCAG00010004975)	BTBD1 (ENSLCAG00010004976)	TM6SF1 (ENSLCAG00010004986)	ENSLCAG00010004989	ENSLCAG00010004992	ap1s2 (ENSLCAG00010005007)	PHKA2 (ENSLCAG00010005084)	ENSLCAG00010005185	ppef1 (ENSLCAG00010005196)	rs1a (ENSLCAG00010005206)
Eupercaria	ANCESTRAL SPECIES	14	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000161181.c	ENSGT00940000157355.c
Tetraodontidae	ANCESTRAL SPECIES	4	ENSGT01100000263555.a.a.a	ENSGT00940000156082.a.b	ENSGT00730000111116	ENSGT00940000155126.s.a	ENSGT00390000004553	ENSGT00940000160059.a.b.a	ENSGT00550000075037	ENSGT00390000010218	ENSGT01090000259985.b.b.a.b	ENSGT01090000259985.b.b.a.a.k.b	ENSGT01090000259985.b.b.a.a.k.a	ENSGT00390000000155.a.a	ENSGT00390000018895.a	ENSGT00950000183058.A.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000154664.h.n.c.q	ENSGT00940000154664.h.n.c.r	ENSGT00940000159830	ENSGT00940000166846
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	20	PLA2R1 (ENSTNIG00000009475)	ITGB6 (ENSTNIG00000009476)	RBMS1 (ENSTNIG00000009477)	psmd14 (ENSTNIG00000009478)	fn1b (ENSTNIG00000009479)	atic (ENSTNIG00000009480)	mnx2b (ENSTNIG00000009481)	stk16 (ENSTNIG00000000931)	pcnp (ENSTNIG00000009482)	ENSTNIG00000001437	PRSS23 (ENSTNIG00000009483)	tmem39a (ENSTNIG00000009484)	ildr1a (ENSTNIG00000009485)	ENSTNIG00000009486	gatm (ENSTNIG00000009487) #22	gatm (ENSTNIG00000012575) #22	pde8a (ENSTNIG00000009488)	FSD2 (ENSTNIG00000009489)	WHAMM (ENSTNIG00000009490)	HOMER2 (ENSTNIG00000009491)	RAMAC (ENSTNIG00000009492)	BTBD1 (ENSTNIG00000009493)	TM6SF1 (ENSTNIG00000009494)	ZRSR2 (ENSTNIG00000009495)	ap1s2 (ENSTNIG00000009496)	PHKA2 (ENSTNIG00000009497)	KLHL10 (ENSTNIG00000009498)	KLHL10 (ENSTNIG00000009499)	ppef1 (ENSTNIG00000009500)	ENSTNIG00000009501	cdkl5 (ENSTNIG00000009502)
Tetraodon	MODERN SPECIES	20	ENSTNIG00000009474	PLA2R1 (ENSTNIG00000009475)	ITGB6 (ENSTNIG00000009476)	RBMS1 (ENSTNIG00000009477)	psmd14 (ENSTNIG00000009478)	fn1b (ENSTNIG00000009479)	atic (ENSTNIG00000009480)	mnx2b (ENSTNIG00000009481)	stk16 (ENSTNIG00000000931)	pcnp (ENSTNIG00000009482)	ENSTNIG00000001437	PRSS23 (ENSTNIG00000009483)	tmem39a (ENSTNIG00000009484)	ildr1a (ENSTNIG00000009485)	ENSTNIG00000009486	gatm (ENSTNIG00000009487) #22	gatm (ENSTNIG00000012575) #22	pde8a (ENSTNIG00000009488)	FSD2 (ENSTNIG00000009489)	WHAMM (ENSTNIG00000009490)	HOMER2 (ENSTNIG00000009491)	RAMAC (ENSTNIG00000009492)	BTBD1 (ENSTNIG00000009493)	TM6SF1 (ENSTNIG00000009494)	ZRSR2 (ENSTNIG00000009495)	ap1s2 (ENSTNIG00000009496)	PHKA2 (ENSTNIG00000009497)	KLHL10 (ENSTNIG00000009498)	KLHL10 (ENSTNIG00000009499)	ppef1 (ENSTNIG00000009500)	ENSTNIG00000009501
Fugu	MODERN SPECIES	4	ITGB6 (ENSTRUG00000020431)	RBMS1 (ENSTRUG00000017155)	psmd14 (ENSTRUG00000017153)	atic (ENSTRUG00000017131)	mnx2b (ENSTRUG00000022705)	fn1b (ENSTRUG00000017137)	stk16 (ENSTRUG00000020005)	pcnp (ENSTRUG00000023392)	ENSTRUG00000033439	ENSTRUG00000017124	ENSTRUG00000020540	PRSS23 (ENSTRUG00000017120)	tmem39a (ENSTRUG00000017117)	ildr1a (ENSTRUG00000017115)	ENSTRUG00000017113	gatm (ENSTRUG00000017109) #22	pde8a (ENSTRUG00000017107)	ENSTRUG00000017106	ENSTRUG00000017105	WHAMM (ENSTRUG00000017098)	HOMER2 (ENSTRUG00000017096)	RAMAC (ENSTRUG00000019891)	BTBD1 (ENSTRUG00000017094)	TM6SF1 (ENSTRUG00000017092)	ENSTRUG00000023769	ap1s2 (ENSTRUG00000017087)	PHKA2 (ENSTRUG00000017072)	KLHL10 (ENSTRUG00000017069)	KLHL10 (ENSTRUG00000017068)	ppef1 (ENSTRUG00000017060)	ENSTRUG00000023615
Eupecaria_A	ANCESTRAL SPECIES	15	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000161181.c	ENSGT00940000157355.c
Ballan wrasse	MODERN SPECIES	107									leo1 (ENSLBEG00000023895)	mapk6 (ENSLBEG00000023939)	USP50 (ENSLBEG00000023975)	USP8 (ENSLBEG00000024024)	hdc (ENSLBEG00000024097)	slc27a2a (ENSLBEG00000024149)	ENSLBEG00000024176	gatm (ENSLBEG00000024205) #22	pde8a (ENSLBEG00000024275)	ENSLBEG00000024341	FSD2 (ENSLBEG00000024404)	WHAMM (ENSLBEG00000024435)	homer2 (ENSLBEG00000024491)	ENSLBEG00000024550	BTBD1 (ENSLBEG00000024568)	TM6SF1 (ENSLBEG00000024596)	ENSLBEG00000024627	ap1s2 (ENSLBEG00000024656)	PHKA2 (ENSLBEG00000024738)	ppef1 (ENSLBEG00000024940)	rs1a (ENSLBEG00000024988)	cdkl5 (ENSLBEG00000025071)	ENSLBEG00000025225
Eupecaria_B	ANCESTRAL SPECIES	15	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000161181.c	ENSGT00940000157355.c
Perciformes	ANCESTRAL SPECIES	15	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000157334	ENSGT00940000166846
Cottioidei	ANCESTRAL SPECIES	13					ENSGT00390000012054.b.c	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000157334	ENSGT00940000166846	ENSGT00940000157355.c
Stickleback	MODERN SPECIES	1	zgc:101040 (ENSGACG00000014973)	ENSGACG00000014976	ENSGACG00000014977	ENSGACG00000014978	ENSGACG00000014980	scg3 (ENSGACG00000014981)	lysmd2 (ENSGACG00000014985)	tmod2 (ENSGACG00000014989)	leo1 (ENSGACG00000014999)	mapk6 (ENSGACG00000015004)	USP50 (ENSGACG00000015008)	USP8 (ENSGACG00000015010)	hdc (ENSGACG00000015018)	slc27a2a (ENSGACG00000015021)	ENSGACG00000015025	gatm (ENSGACG00000015028) #22	pde8a (ENSGACG00000015037)	ENSGACG00000015040	FSD2 (ENSGACG00000015044)	WHAMM (ENSGACG00000015047)	HOMER2 (ENSGACG00000015051)	RAMAC (ENSGACG00000015052)	BTBD1 (ENSGACG00000015053)	TM6SF1 (ENSGACG00000015059)	ZRSR2 (ENSGACG00000015069)	ap1s2 (ENSGACG00000015072)	PHKA2 (ENSGACG00000015078)	ppef1 (ENSGACG00000015084)	ENSGACG00000015091	cdkl5 (ENSGACG00000015093)	SCML2 (ENSGACG00000015096)
Lumpfish	MODERN SPECIES	18	ENSCLMG00005003005	ENSCLMG00005003040	dhcr7 (ENSCLMG00005003186)	MMP15 (ENSCLMG00005003189)	zgc:101040 (ENSCLMG00005003191)	scg3 (ENSCLMG00005003194)	lysmd2 (ENSCLMG00005003274)	tmod2 (ENSCLMG00005003275)	leo1 (ENSCLMG00005003282)	mapk6 (ENSCLMG00005003286)	USP50 (ENSCLMG00005003291)	USP8 (ENSCLMG00005003315)	hdc (ENSCLMG00005003335)	slc27a2a (ENSCLMG00005005836)	ENSCLMG00005005839	gatm (ENSCLMG00005006018) #22	pde8a (ENSCLMG00005006030)	ENSCLMG00005007419	FSD2 (ENSCLMG00005007422)	WHAMM (ENSCLMG00005007423)	HOMER2 (ENSCLMG00005007425)	RAMAC (ENSCLMG00005007426)	BTBD1 (ENSCLMG00005007427)	sdr42e1 (ENSCLMG00005007438)	wtip (ENSCLMG00005007439)	gpib (ENSCLMG00005007445)	GARRE1 (ENSCLMG00005007632)	ss18l2 (ENSCLMG00005007635)	PHKB (ENSCLMG00005007656)	ITFG1 (ENSCLMG00005012691)	NETO2 (ENSCLMG00005012823)
Perciformes_a	ANCESTRAL SPECIES	13	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000157334	ENSGT00940000157355.c
Channel bull blenny	MODERN SPECIES	17	sema6dl (ENSCGOG00000014318) #14	dmxl2 (ENSCGOG00000016075)	gldn (ENSCGOG00000017158)	cyp19a1a (ENSCGOG00000017219)	tnfaip8l3 (ENSCGOG00000019666)	scg3 (ENSCGOG00000019667)	lysmd2 (ENSCGOG00000019669)	tmod2 (ENSCGOG00000019676)	leo1 (ENSCGOG00000020013)	mapk6 (ENSCGOG00000020022)	USP50 (ENSCGOG00000020044)	USP8 (ENSCGOG00000020077)	hdc (ENSCGOG00000020688)	ENSCGOG00000020725	ENSCGOG00000020737	gatm (ENSCGOG00000020970) #22	pde8a (ENSCGOG00000020973)	ENSCGOG00000021126	ENSCGOG00000021127	WHAMM (ENSCGOG00000021130)	homer2 (ENSCGOG00000021139)	HOMER2 (ENSCGOG00000021158)	RAMAC (ENSCGOG00000021165)	BTBD1 (ENSCGOG00000021167)	TM6SF1 (ENSCGOG00000021170)	ENSCGOG00000021171	ap1s2 (ENSCGOG00000021174)	PHKA2 (ENSCGOG00000021261)	ENSCGOG00000023017	ENSCGOG00000023018	rs1a (ENSCGOG00000023020)
Pike perch	DUPLICATION
Pike perch	MODERN SPECIES	20	sema6dl (ENSSLUG00000025355) #14	dmxl2 (ENSSLUG00000025439)	gldn (ENSSLUG00000025470)	cyp19a1a (ENSSLUG00000025475)	tnfaip8l3 (ENSSLUG00000025477)	scg3 (ENSSLUG00000025480)	lysmd2 (ENSSLUG00000025484)	tmod2 (ENSSLUG00000025503)	leo1 (ENSSLUG00000025525)	mapk6 (ENSSLUG00000025532)	USP50 (ENSSLUG00000025537)	USP8 (ENSSLUG00000025547)	hdc (ENSSLUG00000000317)	slc27a2a (ENSSLUG00000000428)	ENSSLUG00000000582	gatm (ENSSLUG00000000714) #22	pde8a (ENSSLUG00000000765)	ENSSLUG00000000874	FSD2 (ENSSLUG00000000881)	ENSSLUG00000000886	HOMER2 (ENSSLUG00000000893)	RAMAC (ENSSLUG00000000901)	BTBD1 (ENSSLUG00000000906)	TM6SF1 (ENSSLUG00000000918)	ZRSR2 (ENSSLUG00000000930)	ap1s2 (ENSSLUG00000000935)	PHKA2 (ENSSLUG00000000992)	ppef1 (ENSSLUG00000001148)	ENSSLUG00000001165	cdkl5 (ENSSLUG00000001173)	ENSSLUG00000001183
Pike perch	MODERN SPECIES	21	ENSSLUG00000002785	slc35e1 (ENSSLUG00000002783)	MED26 (ENSSLUG00000002778)	smim7 (ENSSLUG00000002775)	tmem38a (ENSSLUG00000002769)	comp (ENSSLUG00000001910)	CRTC1 (ENSSLUG00000001556)	klhl26 (ENSSLUG00000001533)	ENSSLUG00000001517	MAST3 (ENSSLUG00000001339)	ndufa7 (ENSSLUG00000001299)	ENSSLUG00000001296	ENSSLUG00000001294	ENSSLUG00000001291	b3gnt3.4 (ENSSLUG00000001289)	gatm (ENSSLUG00000001282) #22	ENSSLUG00000001209	slc5a5 (ENSSLUG00000001137)	cluap1 (ENSSLUG00000001114)	ccdc124 (ENSSLUG00000001108)	KCNN1 (ENSSLUG00000001092)	uhrf1 (ENSSLUG00000001039)	kdm4b (ENSSLUG00000000972)	PTPRS (ENSSLUG00000000739)	tbxa2r (ENSSLUG00000000625)	gipc3 (ENSSLUG00000000615)	ENSSLUG00000000606	lim2.2 (ENSSLUG00000000581)	wdr47b (ENSSLUG00000000527)	camsap2a (ENSSLUG00000000503)	ddx59 (ENSSLUG00000000469)
Eupecaria_C	ANCESTRAL SPECIES	11	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a.j	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000161181.c	ENSGT00940000157355.c
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	7	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a.j	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000161181.c	ENSGT00940000157355.c
European seabass	DUPLICATION
European seabass	MODERN SPECIES	18	sema6dl (ENSDLAG00005025180) #14	dmxl2 (ENSDLAG00005024523)	gldn (ENSDLAG00005028372)	cyp19a1a (ENSDLAG00005024320)	tnfaip8l3 (ENSDLAG00005024311)	scg3 (ENSDLAG00005024308)	lysmd2 (ENSDLAG00005028308)	tmod2 (ENSDLAG00005024291)	leo1 (ENSDLAG00005024255)	mapk6 (ENSDLAG00005024244)	ENSDLAG00005024240	ENSDLAG00005024171	hdc (ENSDLAG00005023903)	slc27a2a (ENSDLAG00005023817)	ENSDLAG00005023808	gatm (ENSDLAG00005003052) #22	ENSDLAG00005002930	gatm (ENSDLAG00005010400) #22	pde8a (ENSDLAG00005023214)	ENSDLAG00005023183	FSD2 (ENSDLAG00005023165)	WHAMM (ENSDLAG00005023157)	HOMER2 (ENSDLAG00005023144)	RAMAC (ENSDLAG00005034097)	BTBD1 (ENSDLAG00005023093)	TM6SF1 (ENSDLAG00005023074)	ENSDLAG00005023069	ENSDLAG00005034814	PHKA2 (ENSDLAG00005022998)	ppef1 (ENSDLAG00005022972)	RS1 (ENSDLAG00005030303)
European seabass	MODERN SPECIES	18	gldn (ENSDLAG00005028372)	cyp19a1a (ENSDLAG00005024320)	tnfaip8l3 (ENSDLAG00005024311)	scg3 (ENSDLAG00005024308)	lysmd2 (ENSDLAG00005028308)	tmod2 (ENSDLAG00005024291)	leo1 (ENSDLAG00005024255)	mapk6 (ENSDLAG00005024244)	ENSDLAG00005024240	ENSDLAG00005024171	hdc (ENSDLAG00005023903)	slc27a2a (ENSDLAG00005023817)	ENSDLAG00005023808	gatm (ENSDLAG00005003052) #22	ENSDLAG00005002930	gatm (ENSDLAG00005010400) #22	pde8a (ENSDLAG00005023214)	ENSDLAG00005023183	FSD2 (ENSDLAG00005023165)	WHAMM (ENSDLAG00005023157)	HOMER2 (ENSDLAG00005023144)	RAMAC (ENSDLAG00005034097)	BTBD1 (ENSDLAG00005023093)	TM6SF1 (ENSDLAG00005023074)	ENSDLAG00005023069	ENSDLAG00005034814	PHKA2 (ENSDLAG00005022998)	ppef1 (ENSDLAG00005022972)	RS1 (ENSDLAG00005030303)	cdkl5 (ENSDLAG00005029698)	SCML2 (ENSDLAG00005022951)
Large yellow croaker	MODERN SPECIES	480	sema6dl (ENSLCRG00005021111) #14	dmxl2 (ENSLCRG00005016306)	gldn (ENSLCRG00005016234)	cyp19a1a (ENSLCRG00005016193)	tnfaip8l3 (ENSLCRG00005016189)	scg3 (ENSLCRG00005016183)	lysmd2 (ENSLCRG00005016182)	tmod2 (ENSLCRG00005016155)	leo1 (ENSLCRG00005016152)	mapk6 (ENSLCRG00005016151)	USP50 (ENSLCRG00005016147)	USP8 (ENSLCRG00005016140)	hdc (ENSLCRG00005016067)	slc27a2a (ENSLCRG00005015804)	ENSLCRG00005015596	gatm (ENSLCRG00005015578) #22	pde8a (ENSLCRG00005014288)	ENSLCRG00005014270	FSD2 (ENSLCRG00005014263)	WHAMM (ENSLCRG00005014261)	homer2 (ENSLCRG00005014259)	ENSLCRG00005014258	BTBD1 (ENSLCRG00005013954)	TM6SF1 (ENSLCRG00005013951)	ZRSR2 (ENSLCRG00005013949)	ap1s2 (ENSLCRG00005013948)	ENSLCRG00005013947	PHKA2 (ENSLCRG00005013589)	ENSLCRG00005013583	ppef1 (ENSLCRG00005013574)	RS1 (ENSLCRG00005013573)
Gilthead seabream	MODERN SPECIES	18	sema6dl (ENSSAUG00010022220) #14	dmxl2 (ENSSAUG00010022332)	gldn (ENSSAUG00010022349)	cyp19a1a (ENSSAUG00010022362)	tnfaip8l3 (ENSSAUG00010022651)	scg3 (ENSSAUG00010022653)	lysmd2 (ENSSAUG00010022656)	tmod2 (ENSSAUG00010022659)	leo1 (ENSSAUG00010022669)	mapk6 (ENSSAUG00010022674)	ENSSAUG00010022675	USP8 (ENSSAUG00010022679)	hdc (ENSSAUG00010022696)	slc27a2a (ENSSAUG00010022708)	ENSSAUG00010022874	gatm (ENSSAUG00010022921) #22	ENSSAUG00010022922	ENSSAUG00010022923	ENSSAUG00010022931	ENSSAUG00010022934	fam219b (ENSSAUG00010022936)	COX5a2 (ENSSAUG00010022937)	SNAP25 (ENSSAUG00010022941)	LRRC28 (ENSSAUG00010022944)	igf1rb (ENSSAUG00010022954)	ap3s2 (ENSSAUG00010023180)	ANPEP (ENSSAUG00010023189)	ANPEP (ENSSAUG00010023403)	mespaa (ENSSAUG00010023648)	mespba (ENSSAUG00010023650)	sv2ba (ENSSAUG00010023666)
Ovalentaria	ANCESTRAL SPECIES	17	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT01000000220501	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000161181.c
Atherinomorphae	ANCESTRAL SPECIES	8	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT01000000220501	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000166846
Cyprinodontiformes	ANCESTRAL SPECIES	9	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c	ENSGT00940000159407.q
Aplocheiloidei	ANCESTRAL SPECIES	48										ENSGT00940000154351	ENSGT00940000160441.l	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000157334	ENSGT00940000157355.c	ENSGT00940000159407.q
Turquoise killifish	MODERN SPECIES	1616	SLC12A1 (ENSNFUG00015012441) #9	CTXN2 (ENSNFUG00015014721) #10	myef2 (ENSNFUG00015014748) #11	slc24a5 (ENSNFUG00015014791) #12	RNF128 (ENSNFUG00015014983)	SEMA6DL (ENSNFUG00015015127) #14	ENSNFUG00015016858	dmxl2 (ENSNFUG00015017061)	ENSNFUG00015021737	MAPK6 (ENSNFUG00015021741)	USP50 (ENSNFUG00015021748)	USP8 (ENSNFUG00015021753)	hdc (ENSNFUG00015021763)	slc27a2a (ENSNFUG00015021794)	ENSNFUG00015021824	gatm (ENSNFUG00015021982) #22	PDE8A (ENSNFUG00015022081)	ENSNFUG00015023174	ENSNFUG00015023176	Nfu_g_1_003224 (ENSNFUG00015023178)	ENSNFUG00015023181	WHAMM (ENSNFUG00015023184)	HOMER2 (ENSNFUG00015023189)	RAMAC (ENSNFUG00015023200)	BTBD1 (ENSNFUG00015023206)	TM6SF1 (ENSNFUG00015023230)	ENSNFUG00015023245	AP1S2 (ENSNFUG00015023257)	PHKA2 (ENSNFUG00015023279)	ENSNFUG00015023586	PPEF1 (ENSNFUG00015003201)
Mangrove rivulus	MODERN SPECIES	880														ENSKMAG00000005067	ENSKMAG00000005078	gatm (ENSKMAG00000005100) #22
Cyprinodontoidei	ANCESTRAL SPECIES	6	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c	ENSGT00940000159407.q
Poeciliinae	ANCESTRAL SPECIES	13	ENSGT00940000159303 #14	ENSGT00390000000096.b.a.f	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c	ENSGT00940000159407.q
Poecilia	ANCESTRAL SPECIES	4	ENSGT00940000159303 #14	ENSGT00390000000096.b.a.f	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c	ENSGT00940000159407.q
NAME_6	ANCESTRAL SPECIES	77	ENSGT00390000000096.b.a.f	ENSGT00940000158020.d.e	ENSGT00940000158020.d.f	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c	ENSGT00940000159407.q
Amazon molly	MODERN SPECIES	363	ENSPFOG00000022115	gldn (ENSPFOG00000017909)	cyp19a1a (ENSPFOG00000017864)	tnfaip8l3 (ENSPFOG00000020850)	tnfaip8l3 (ENSPFOG00000020849)	scg3 (ENSPFOG00000017829)	lysmd2 (ENSPFOG00000017823)	tmod2 (ENSPFOG00000017790)	leo1 (ENSPFOG00000017762)	mapk6 (ENSPFOG00000017732)	ENSPFOG00000024374	USP8 (ENSPFOG00000017705)	hdc (ENSPFOG00000017675)	slc27a2a (ENSPFOG00000017641)	ENSPFOG00000017620	gatm (ENSPFOG00000017592) #22	pde8a (ENSPFOG00000017477)	ENSPFOG00000017459	FSD2 (ENSPFOG00000017446)	WHAMM (ENSPFOG00000017430)	homer2 (ENSPFOG00000017423)	HOMER2 (ENSPFOG00000017369)	RAMAC (ENSPFOG00000017361)	BTBD1 (ENSPFOG00000017331)	TM6SF1 (ENSPFOG00000017318)	ZRSR2 (ENSPFOG00000017288)	ap1s2 (ENSPFOG00000017274)	PHKA2 (ENSPFOG00000017142)	ppef1 (ENSPFOG00000017085)	ENSPFOG00000017071	cdkl5 (ENSPFOG00000017036)
Sailfin molly	MODERN SPECIES	487										mapk6 (ENSPLAG00000019155)	USP50 (ENSPLAG00000019177)	USP8 (ENSPLAG00000019236)	hdc (ENSPLAG00000019292)	slc27a2a (ENSPLAG00000019388)	ENSPLAG00000019398	gatm (ENSPLAG00000019428) #22	pde8a (ENSPLAG00000019501)	ENSPLAG00000019561	FSD2 (ENSPLAG00000019746)	WHAMM (ENSPLAG00000019767)	HOMER2 (ENSPLAG00000019823)	RAMAC (ENSPLAG00000019830)	BTBD1 (ENSPLAG00000019856)	TM6SF1 (ENSPLAG00000019860)	ZRSR2 (ENSPLAG00000019869)	ap1s2 (ENSPLAG00000000641)	PHKA2 (ENSPLAG00000019960)	ppef1 (ENSPLAG00000020021)	ENSPLAG00000020051	cdkl5 (ENSPLAG00000020105)	SCML2 (ENSPLAG00000020120)
Guppy	MODERN SPECIES	455	dmxl2 (ENSPREG00000011194)	gldn (ENSPREG00000011547)	cyp19a1a (ENSPREG00000012213)	tnfaip8l3 (ENSPREG00000018651)	scg3 (ENSPREG00000018659)	lysmd2 (ENSPREG00000018677)	tmod2 (ENSPREG00000018693)	leo1 (ENSPREG00000018743)	mapk6 (ENSPREG00000018774)	USP50 (ENSPREG00000018791)	USP8 (ENSPREG00000018813)	hdc (ENSPREG00000018872)	slc27a2a (ENSPREG00000018896)	ENSPREG00000018911	ENSPREG00000018922	gatm (ENSPREG00000018938) #22	pde8a (ENSPREG00000018974)	FSD2 (ENSPREG00000019086)	WHAMM (ENSPREG00000019100)	HOMER2 (ENSPREG00000019120)	ENSPREG00000019136	BTBD1 (ENSPREG00000019151)	TM6SF1 (ENSPREG00000019184)	ZRSR2 (ENSPREG00000019201)	ap1s2 (ENSPREG00000019224)	PHKA2 (ENSPREG00000019259)	ppef1 (ENSPREG00000019419)	ENSPREG00000019438	cdkl5 (ENSPREG00000019470)	SCML2 (ENSPREG00000019550)	NHS (ENSPREG00000019576)
Platyfish	MODERN SPECIES	18	sema6dl (ENSXMAG00000002234) #14	dmxl2 (ENSXMAG00000002209)	gldn (ENSXMAG00000002203)	cyp19a1a (ENSXMAG00000002192)	tnfaip8l3 (ENSXMAG00000002189)	scg3 (ENSXMAG00000002179)	lysmd2 (ENSXMAG00000027022)	tmod2 (ENSXMAG00000002168)	leo1 (ENSXMAG00000002158)	mapk6 (ENSXMAG00000002154)	USP50 (ENSXMAG00000002152)	USP8 (ENSXMAG00000002148)	hdc (ENSXMAG00000024575)	slc27a2a (ENSXMAG00000002117)	ENSXMAG00000002111	gatm (ENSXMAG00000002105) #22	pde8a (ENSXMAG00000002082)	ENSXMAG00000022313	ENSXMAG00000029722	FSD2 (ENSXMAG00000002076)	WHAMM (ENSXMAG00000002066)	HOMER2 (ENSXMAG00000002059)	RAMAC (ENSXMAG00000015208)	BTBD1 (ENSXMAG00000015211)	TM6SF1 (ENSXMAG00000015231)	ZRSR2 (ENSXMAG00000015258)	ap1s2 (ENSXMAG00000015858)	PHKA2 (ENSXMAG00000002032)	ppef1 (ENSXMAG00000002022)	ENSXMAG00000028344	cdkl5 (ENSXMAG00000002007)
NAME_4	ANCESTRAL SPECIES	6	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000157334	ENSGT00940000157355.c	ENSGT00940000159407.q
Sheepshead minnow	MODERN SPECIES	234	ENSCVAG00000011053	dmxl2 (ENSCVAG00000011203)	gldn (ENSCVAG00000011216)	cyp19a1a (ENSCVAG00000011244)	tnfaip8l3 (ENSCVAG00000011253)	scg3 (ENSCVAG00000011399)	lysmd2 (ENSCVAG00000011412)	tmod2 (ENSCVAG00000011453)	leo1 (ENSCVAG00000011488)	mapk6 (ENSCVAG00000011499)	USP50 (ENSCVAG00000011525)	USP8 (ENSCVAG00000011538)	hdc (ENSCVAG00000011565)	slc27a2a (ENSCVAG00000011574)	ENSCVAG00000011603	gatm (ENSCVAG00000011627) #22	pde8a (ENSCVAG00000011637)	ENSCVAG00000011650	FSD2 (ENSCVAG00000011667)	WHAMM (ENSCVAG00000011675)	HOMER2 (ENSCVAG00000011709)	RAMAC (ENSCVAG00000011717)	BTBD1 (ENSCVAG00000011742)	paqr5a (ENSCVAG00000011779)
Mummichog	MODERN SPECIES	421		dmxl2 (ENSFHEG00000008267)	gldn (ENSFHEG00000008159)	cyp19a1a (ENSFHEG00000008132)	tnfaip8l3 (ENSFHEG00000008048)	scg3 (ENSFHEG00000008043)	lysmd2 (ENSFHEG00000008031)	tmod2 (ENSFHEG00000008019)	leo1 (ENSFHEG00000007981)	mapk6 (ENSFHEG00000007971)	USP50 (ENSFHEG00000007950)	USP8 (ENSFHEG00000007910)	hdc (ENSFHEG00000007888)	slc27a2a (ENSFHEG00000007856)	ENSFHEG00000007841	gatm (ENSFHEG00000007791) #22
Oryzias	ANCESTRAL SPECIES	13	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT01000000220501	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000157334
Oryzias_a	ANCESTRAL SPECIES	6	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000168079	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c
Japanese Medaka HdrR	MODERN SPECIES	17	ENSORLG00000025494	gldn (ENSORLG00000002908)	cyp19a1a (ENSORLG00000002949)	tnfaip8l3 (ENSORLG00000027022)	scg3 (ENSORLG00000002989)	lysmd2 (ENSORLG00000026773)	ENSORLG00000029392	tmod2 (ENSORLG00000003045)	leo1 (ENSORLG00000003064)	mapk6 (ENSORLG00000003082)	ENSORLG00000003094	USP8 (ENSORLG00000003140)	hdc (ENSORLG00000003155)	slc27a2a (ENSORLG00000003164)	ENSORLG00000003218	gatm (ENSORLG00000003253) #22	pde8a (ENSORLG00000003332)	ENSORLG00000003341	FSD2 (ENSORLG00000003348)	WHAMM (ENSORLG00000003364)	homer2 (ENSORLG00000003402)	ENSORLG00000003414	BTBD1 (ENSORLG00000003434)	TM6SF1 (ENSORLG00000003460)	ZRSR2 (ENSORLG00000003476)	ap1s2 (ENSORLG00000024796)	PHKA2 (ENSORLG00000003555)	ppef1 (ENSORLG00000003571)	ENSORLG00000022456	cdkl5 (ENSORLG00000003597)	SCML2 (ENSORLG00000003607)
Chinese medaka	MODERN SPECIES	72				ENSOSIG00000022468	dmxl2 (ENSOSIG00000022486)	gldn (ENSOSIG00000022489)	cyp19a1a (ENSOSIG00000022494)	tnfaip8l3 (ENSOSIG00000022498)	tmod2 (ENSOSIG00000022516)	leo1 (ENSOSIG00000022520)	mapk6 (ENSOSIG00000000090)	ENSOSIG00000000102	USP8 (ENSOSIG00000000138)	slc27a2a (ENSOSIG00000000228)	ENSOSIG00000000460	gatm (ENSOSIG00000000960) #22	pde8a (ENSOSIG00000001008)	ENSOSIG00000007311	FSD2 (ENSOSIG00000007316)	WHAMM (ENSOSIG00000007318)	HOMER2 (ENSOSIG00000007320)	RAMAC (ENSOSIG00000007321)	ZRSR2 (ENSOSIG00000007323)	ap1s2 (ENSOSIG00000007326)	PHKA2 (ENSOSIG00000007349)	ppef1 (ENSOSIG00000007384)	ENSOSIG00000007387	cdkl5 (ENSOSIG00000007391)	SCML2 (ENSOSIG00000007514)	NHS (ENSOSIG00000007518)	ace2 (ENSOSIG00000007535)
Oryzias_b	ANCESTRAL SPECIES	5	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00550000074952	ENSGT00940000158280	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT01000000220501	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000165409.f	ENSGT00940000159830	ENSGT00940000157334
Indian medaka	MODERN SPECIES	26	sema6dl (ENSOMEG00000000246) #14	dmxl2 (ENSOMEG00000000249)	gldn (ENSOMEG00000010517)	cyp19a1a (ENSOMEG00000010567)	tnfaip8l3 (ENSOMEG00000010579)	scg3 (ENSOMEG00000010616)	lysmd2 (ENSOMEG00000010630)	tmod2 (ENSOMEG00000010680)	leo1 (ENSOMEG00000010732)	mapk6 (ENSOMEG00000010774)	USP50 (ENSOMEG00000010801)	USP8 (ENSOMEG00000010929)	hdc (ENSOMEG00000011031)	slc27a2a (ENSOMEG00000011076)	ENSOMEG00000011120	gatm (ENSOMEG00000011167) #22	pde8a (ENSOMEG00000011337)	ENSOMEG00000000695	FSD2 (ENSOMEG00000011485)	WHAMM (ENSOMEG00000011562)	HOMER2 (ENSOMEG00000011626)	RAMAC (ENSOMEG00000011658)	BTBD1 (ENSOMEG00000011710)	TM6SF1 (ENSOMEG00000011787)	ZRSR2 (ENSOMEG00000011857)	ap1s2 (ENSOMEG00000011899)	PHKA2 (ENSOMEG00000012081)	ENSOMEG00000012119	ppef1 (ENSOMEG00000012152)	rs1a (ENSOMEG00000012169)	cdkl5 (ENSOMEG00000012262)
Javanese ricefish	MODERN SPECIES	17	slc24a5 (ENSOJAG00000000119) #12	sema6dl (ENSOJAG00000000388) #14	gldn (ENSOJAG00000000624)	tnfaip8l3 (ENSOJAG00000000632)	scg3 (ENSOJAG00000000637)	lysmd2 (ENSOJAG00000000648)	leo1 (ENSOJAG00000000660)	tmod2 (ENSOJAG00000000678)	mapk6 (ENSOJAG00000000712)	USP50 (ENSOJAG00000000736)	USP8 (ENSOJAG00000000766)	hdc (ENSOJAG00000000791)	slc27a2a (ENSOJAG00000000805)	ENSOJAG00000000811	ENSOJAG00000000814	gatm (ENSOJAG00000000821) #22	pde8a (ENSOJAG00000001062)	ENSOJAG00000001570	ENSOJAG00000001600	WHAMM (ENSOJAG00000001609)	HOMER2 (ENSOJAG00000001631)	ENSOJAG00000001683	BTBD1 (ENSOJAG00000001731)	TM6SF1 (ENSOJAG00000001807)	ENSOJAG00000001816	ENSOJAG00000001827	ap1s2 (ENSOJAG00000001842)	ppef1 (ENSOJAG00000002077)	rs1a (ENSOJAG00000002133)	cdkl5 (ENSOJAG00000002160)	ENSOJAG00000002206
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000161181.c	ENSGT00940000157355.c	ENSGT00940000175826
Pomacentridae	ANCESTRAL SPECIES	15	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000161181.c	ENSGT00940000157355.c	ENSGT00940000159407.q
Pomacentridae_A	ANCESTRAL SPECIES	28	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000161181.c	ENSGT00940000157355.c	ENSGT00940000159407.q.k
Amphiprion	ANCESTRAL SPECIES	37															ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000161181.c	ENSGT00940000157355.c	ENSGT00940000159407.q.k
Orange clownfish	DUPLICATION
Orange clownfish	MODERN SPECIES		cyp19a1a (ENSAPEG00000024822)	tnfaip8l3 (ENSAPEG00000024806)	scg3 (ENSAPEG00000024804)	lysmd2 (ENSAPEG00000024802)	tmod2 (ENSAPEG00000024798)	ENSAPEG00000024794	slc27a2a (ENSAPEG00000024790)	hdc (ENSAPEG00000024785)	USP8 (ENSAPEG00000024777)	USP50 (ENSAPEG00000024776)	mapk6 (ENSAPEG00000024774)	leo1 (ENSAPEG00000024770)	ENSAPEG00000024767	gatm (ENSAPEG00000024765) #22	ENSAPEG00000024763	gatm (ENSAPEG00000024762) #22	pde8a (ENSAPEG00000024753)	ENSAPEG00000024734	FSD2 (ENSAPEG00000024731)	WHAMM (ENSAPEG00000024724)	homer2 (ENSAPEG00000024715)	RAMAC (ENSAPEG00000024710)	BTBD1 (ENSAPEG00000024697)	TM6SF1 (ENSAPEG00000024682)	ZRSR2 (ENSAPEG00000024673)	ap1s2 (ENSAPEG00000024669)	PHKA2 (ENSAPEG00000024655)	ppef1 (ENSAPEG00000024648)	RS1 (ENSAPEG00000024644)	ENSAPEG00000024641	ENSAPEG00000024639
Orange clownfish	MODERN SPECIES		dmxl2 (ENSAPEG00000024830)	gldn (ENSAPEG00000024829)	cyp19a1a (ENSAPEG00000024822)	tnfaip8l3 (ENSAPEG00000024806)	scg3 (ENSAPEG00000024804)	lysmd2 (ENSAPEG00000024802)	tmod2 (ENSAPEG00000024798)	ENSAPEG00000024794	slc27a2a (ENSAPEG00000024790)	hdc (ENSAPEG00000024785)	USP8 (ENSAPEG00000024777)	USP50 (ENSAPEG00000024776)	mapk6 (ENSAPEG00000024774)	leo1 (ENSAPEG00000024770)	ENSAPEG00000024767	gatm (ENSAPEG00000024765) #22	ENSAPEG00000024763	gatm (ENSAPEG00000024762) #22	pde8a (ENSAPEG00000024753)	ENSAPEG00000024734	FSD2 (ENSAPEG00000024731)	WHAMM (ENSAPEG00000024724)	homer2 (ENSAPEG00000024715)	RAMAC (ENSAPEG00000024710)	BTBD1 (ENSAPEG00000024697)	TM6SF1 (ENSAPEG00000024682)	ZRSR2 (ENSAPEG00000024673)	ap1s2 (ENSAPEG00000024669)	PHKA2 (ENSAPEG00000024655)	ppef1 (ENSAPEG00000024648)	RS1 (ENSAPEG00000024644)
Clown anemonefish	MODERN SPECIES	578															ENSAOCG00000014534	gatm (ENSAOCG00000014563) #22	pde8a (ENSAOCG00000014649)	ENSAOCG00000001817	FSD2 (ENSAOCG00000014720)	WHAMM (ENSAOCG00000014746)	ENSAOCG00000014807	ENSAOCG00000014856	ENSAOCG00000001011	slc22a4 (ENSAOCG00000001017)	ENSAOCG00000014894	slc22a21 (ENSAOCG00000014901)	ENSAOCG00000002106	ENSAOCG00000015128	SLC34A1 (ENSAOCG00000015205)	pdlim4 (ENSAOCG00000015228)
Spiny chromis	MODERN SPECIES	15	ENSAPOG00000005500	ENSAPOG00000005476	CFAP91 (ENSAPOG00000005434)	nr1i2 (ENSAPOG00000005425)	gsk3ba (ENSAPOG00000005406)	GPR156 (ENSAPOG00000005361)	LRRC58 (ENSAPOG00000005325)	fstl1b (ENSAPOG00000005305)	ENSAPOG00000005255	gja8a (ENSAPOG00000005225)	USP50 (ENSAPOG00000005219)	USP8 (ENSAPOG00000005184)	hdc (ENSAPOG00000005147)	slc27a2a (ENSAPOG00000005081)	ENSAPOG00000005065	gatm (ENSAPOG00000005045) #22	pde8a (ENSAPOG00000004983)	ENSAPOG00000004907	FSD2 (ENSAPOG00000004867)	WHAMM (ENSAPOG00000004852)	HOMER2 (ENSAPOG00000004827)	RAMAC (ENSAPOG00000004796)	BTBD1 (ENSAPOG00000004778)	TM6SF1 (ENSAPOG00000004747)	ENSAPOG00000004712	ap1s2 (ENSAPOG00000000114)	PHKA2 (ENSAPOG00000004565)	ppef1 (ENSAPOG00000004359)	RS1 (ENSAPOG00000004340)	cdkl5 (ENSAPOG00000004306)	SCML2 (ENSAPOG00000004266)
Bicolor damselfish	MODERN SPECIES	698															slc27a2a (ENSSPAG00000010251)	gatm (ENSSPAG00000010283) #22	ENSSPAG00000010334	pde8a (ENSSPAG00000010364)	ENSSPAG00000010401	FSD2 (ENSSPAG00000010421)	WHAMM (ENSSPAG00000010471)	homer2 (ENSSPAG00000010478)	RAMAC (ENSSPAG00000010519)	BTBD1 (ENSSPAG00000010525)	TM6SF1 (ENSSPAG00000010564)	ZRSR2 (ENSSPAG00000010595)	ap1s2 (ENSSPAG00000010613)	PHKA2 (ENSSPAG00000010647)	ppef1 (ENSSPAG00000010848)	ENSSPAG00000010923	SCML2 (ENSSPAG00000010951)
Cichlidae	ANCESTRAL SPECIES	11	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c	ENSGT00940000175826
Pseudocrenilabrinae	ANCESTRAL SPECIES	13	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c	ENSGT00940000175826
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13	ENSGT00940000159303 #14	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c	ENSGT00940000175826
Haplochromini	ANCESTRAL SPECIES	11	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b.v	ENSGT00940000164068.a.b.b.u	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c	ENSGT00940000175826
Burton s mouthbrooder	MODERN SPECIES	641															ENSHBUG00000003097	gatm (ENSHBUG00000003085) #22	pde8a (ENSHBUG00000003068)	ENSHBUG00000002962	FSD2 (ENSHBUG00000002952)	WHAMM (ENSHBUG00000002934)	homer2 (ENSHBUG00000002891)	RAMAC (ENSHBUG00000002870)	BTBD1 (ENSHBUG00000002857)	TM6SF1 (ENSHBUG00000002812)	ZRSR2 (ENSHBUG00000000797)	ap1s2 (ENSHBUG00000000796)	PHKA2 (ENSHBUG00000023784)	ppef1 (ENSHBUG00000023559)	ENSHBUG00000023531	cdkl5 (ENSHBUG00000023503)	SCML2 (ENSHBUG00000000889)
Haplochromini_A	ANCESTRAL SPECIES	10	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000161137	ENSGT00940000164068.a.b.b.v	ENSGT00940000164068.a.b.b.u	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c	ENSGT00940000175826
P. nyererei	MODERN SPECIES	689													ENSPNYG00000017909	slc27a2a (ENSPNYG00000017948)	ENSPNYG00000018151	gatm (ENSPNYG00000018166) #22	pde8a (ENSPNYG00000018198)	ENSPNYG00000018218	FSD2 (ENSPNYG00000018257)	WHAMM (ENSPNYG00000018274)	homer2 (ENSPNYG00000018308)	RAMAC (ENSPNYG00000018343)	BTBD1 (ENSPNYG00000018358)	ENSPNYG00000018406	ZRSR2 (ENSPNYG00000018426)	ap1s2 (ENSPNYG00000018487)	PHKA2 (ENSPNYG00000018513)	ppef1 (ENSPNYG00000018619)	ENSPNYG00000018669	cdkl5 (ENSPNYG00000018699)	ENSPNYG00000018745
Haplochromini_B	ANCESTRAL SPECIES	3	ENSGT00390000000096.b.a	ENSGT00940000158020.d	ENSGT00840000129915.b	ENSGT00390000003488.a.a	ENSGT00390000005488	ENSGT00940000160054	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b.v	ENSGT00940000164068.a.b.b.u	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000156756	ENSGT00390000012913.b	ENSGT00950000183152.A	ENSGT00970000193372.a.a.tc.a	ENSGT00950000183118.A.c.a	ENSGT00940000159830	ENSGT00940000166846	ENSGT00940000157355.c	ENSGT00940000159407.q
Eastern happy	MODERN SPECIES		dmxl2 (ENSACLG00000018247)	gldn (ENSACLG00000018741)	cyp19a1a (ENSACLG00000018805)	tnfaip8l3 (ENSACLG00000018837)	scg3 (ENSACLG00000018841)	lysmd2 (ENSACLG00000018861)	tmod2 (ENSACLG00000018873)	leo1 (ENSACLG00000018946)	mapk6 (ENSACLG00000018989)	ENSACLG00000018995	USP8 (ENSACLG00000019006)	hdc (ENSACLG00000019048)	slc27a2a (ENSACLG00000019098)	slc27a2a (ENSACLG00000019112)	ENSACLG00000019129	gatm (ENSACLG00000019193) #22	pde8a (ENSACLG00000019234)	ENSACLG00000019348	FSD2 (ENSACLG00000019390)	WHAMM (ENSACLG00000019425)	homer2 (ENSACLG00000019478)	ENSACLG00000019516	BTBD1 (ENSACLG00000019537)	TM6SF1 (ENSACLG00000019609)	ZRSR2 (ENSACLG00000019635)	ap1s2 (ENSACLG00000019778)	PHKA2 (ENSACLG00000019794)	ENSACLG00000020048	ppef1 (ENSACLG00000020084)	ENSACLG00000020223	cdkl5 (ENSACLG00000020255)
Zebra mbuna	MODERN SPECIES	1091	cyp19a1a (ENSMZEG00005007207)	tnfaip8l3 (ENSMZEG00005007197)	scg3 (ENSMZEG00005007186)	lysmd2 (ENSMZEG00005007166)	tmod2 (ENSMZEG00005007119)	leo1 (ENSMZEG00005007090)	ENSMZEG00005007074	mapk6 (ENSMZEG00005007063)	USP50 (ENSMZEG00005007047)	USP8 (ENSMZEG00005006937)	hdc (ENSMZEG00005006893)	slc27a2a (ENSMZEG00005006850)	ENSMZEG00005006825	slc27a2a (ENSMZEG00005006791)	ENSMZEG00005006764	gatm (ENSMZEG00005006734) #22	pde8a (ENSMZEG00005006720)	ENSMZEG00005006674	FSD2 (ENSMZEG00005006662)	WHAMM (ENSMZEG00005006649)	homer2 (ENSMZEG00005006626)	RAMAC (ENSMZEG00005006611)	BTBD1 (ENSMZEG00005006580)	TM6SF1 (ENSMZEG00005006541)	ZRSR2 (ENSMZEG00005006531)	ap1s2 (ENSMZEG00005006513)	PHKA2 (ENSMZEG00005006455)	ppef1 (ENSMZEG00005006426)	ENSMZEG00005006401	cdkl5 (ENSMZEG00005006367)	SCML2 (ENSMZEG00005006322)
Lyretail cichlid	MODERN SPECIES	290															ENSNBRG00000021490	gatm (ENSNBRG00000021453) #22	pde8a (ENSNBRG00000021356)	FSD2 (ENSNBRG00000021320)	WHAMM (ENSNBRG00000021300)	homer2 (ENSNBRG00000021275)	RAMAC (ENSNBRG00000021267)	BTBD1 (ENSNBRG00000021242)	TM6SF1 (ENSNBRG00000021192)	ZRSR2 (ENSNBRG00000021146)	ap1s2 (ENSNBRG00000021132)	PHKA2 (ENSNBRG00000021078)	ppef1 (ENSNBRG00000021029)	ENSNBRG00000021014	cdkl5 (ENSNBRG00000020971)	ENSNBRG00000020957	ENSNBRG00000020944
Nile tilapia	MODERN SPECIES		cyp19a1a (ENSONIG00000000155)	tnfaip8l3 (ENSONIG00000041467)	scg3 (ENSONIG00000000167)	lysmd2 (ENSONIG00000000172)	tmod2 (ENSONIG00000000174)	leo1 (ENSONIG00000000176)	mapk6 (ENSONIG00000000180)	ENSONIG00000000183	USP8 (ENSONIG00000000185)	hdc (ENSONIG00000000190)	slc27a2a (ENSONIG00000030469)	slc27a2a (ENSONIG00000034343)	slc27a2a (ENSONIG00000015562)	ENSONIG00000036671	ENSONIG00000000192	gatm (ENSONIG00000000198) #22	pde8a (ENSONIG00000000200)	ENSONIG00000000206	ENSONIG00000038956	WHAMM (ENSONIG00000000209)	homer2 (ENSONIG00000000214)	RAMAC (ENSONIG00000041300)	BTBD1 (ENSONIG00000000221)	TM6SF1 (ENSONIG00000000225)	ZRSR2 (ENSONIG00000000228)	ap1s2 (ENSONIG00000010036)	ENSONIG00000040178	ENSONIG00000035438	ENSONIG00000034624	PHKA2 (ENSONIG00000038261)	ppef1 (ENSONIG00000040091)
Midas cichlid	MODERN SPECIES	149									mapk6 (ENSACIG00000003997)	USP50 (ENSACIG00000004035)	USP8 (ENSACIG00000004085)	hdc (ENSACIG00000004200)	hdc (ENSACIG00000004236)	slc27a2a (ENSACIG00000004265)	ENSACIG00000004289	gatm (ENSACIG00000004325) #22	pde8a (ENSACIG00000004340)	FSD2 (ENSACIG00000004423)	WHAMM (ENSACIG00000004489)	homer2 (ENSACIG00000004517)	ENSACIG00000004536	BTBD1 (ENSACIG00000004540)	TM6SF1 (ENSACIG00000004562)	ENSACIG00000004601	ap1s2 (ENSACIG00000004677)	PHKA2 (ENSACIG00000004689)	ppef1 (ENSACIG00000004747)	ENSACIG00000004788	cdkl5 (ENSACIG00000004821)	SCML2 (ENSACIG00000004866)	NHS (ENSACIG00000004902)
Cod	MODERN SPECIES	5	ENSGMOG00000012968	tssc4 (ENSGMOG00000029139)	ENSGMOG00000005940	ENSGMOG00000036015	ENSGMOG00000024372	cd81a (ENSGMOG00000004521)	kcnc1a (ENSGMOG00000031054)	tph1b (ENSGMOG00000000022)	ENSGMOG00000000019	ENSGMOG00000016010	ENSGMOG00000031103	hdc (ENSGMOG00000016050)	ENSGMOG00000016102	ENSGMOG00000016076	ENSGMOG00000008131	ENSGMOG00000008134 #22	ENSGMOG00000008135	ENSGMOG00000036681	ENSGMOG00000008141	ENSGMOG00000024769	ENSGMOG00000034158	ENSGMOG00000027767	ENSGMOG00000030829	ENSGMOG00000033889	ENSGMOG00000035164	cyp1a (ENSGMOG00000000318)	ENSGMOG00000029214	CSK (ENSGMOG00000012780)	ENSGMOG00000029058	ENSGMOG00000020169	ULK3 (ENSGMOG00000002181)
Protacanthopterygii	ANCESTRAL SPECIES	101	ENSGT00390000006347.a	ENSGT00940000160333	ENSGT00390000017790	ENSGT00940000155568	ENSGT00940000163723.A.e	ENSGT00940000163723.A.f.b	ENSGT01050000244900.a.a.b.eb	ENSGT00940000158280	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000168079	ENSGT00940000165890	ENSGT00940000157369.b	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.A.a	ENSGT00940000154914.vb	ENSGT00940000155836.B	ENSGT01030000234532.B.e.b.e ##12
Salmoninae	ANCESTRAL SPECIES	1	ENSGT00390000006347.a	ENSGT00940000160333	ENSGT00390000017790	ENSGT00940000155568	ENSGT00940000163723.A.e	ENSGT00940000163723.A.f.b	ENSGT01050000244900.a.a.b.eb.h	ENSGT00940000158280.l	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422.j	ENSGT00940000156422.i	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b	ENSGT00940000157324	ENSGT00390000011190	ENSGT00940000168079	ENSGT00940000165890	ENSGT00940000157369.b	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.A.a	ENSGT00940000154914.vb	ENSGT00940000155836.B.j
Salmoninae_a	ANCESTRAL SPECIES	85	ENSGT00390000017790	ENSGT00940000155568	ENSGT00940000163723.A.e	ENSGT00940000163723.A.f.b	ENSGT01050000244900.a.a.b.eb.h	ENSGT00940000158280.l	ENSGT01050000244900.a.a.b.eb.g.a	ENSGT00940000158280.k	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000157938	ENSGT00940000164068.a.b.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422.j	ENSGT00940000156422.i	ENSGT00510000047412.b	ENSGT00940000158441	ENSGT00510000046704.b.b.a	ENSGT00940000157324.l	ENSGT00390000011190	ENSGT00940000165890	ENSGT00940000157369.b	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.A.a.i.a	ENSGT00940000154914.vb	ENSGT00940000155836.B.j	ENSGT01030000234532.B.e.b.e ##12
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	188								ENSGT00940000154351.yb	ENSGT00940000160441	ENSGT00940000157542.e.b	ENSGT00940000163460.a.a.c.a.b	ENSGT00940000157938	ENSGT00940000164068.a.b.b.o	ENSGT00940000164068.a.b.a.a.a.e	ENSGT00390000011613.t #22	ENSGT00390000011613.s #22	ENSGT00940000156422.j	ENSGT00510000047412.b.f	ENSGT00940000158441.f	ENSGT00510000046704.b.b.a.d	ENSGT00940000157324.l	ENSGT00390000011190	ENSGT00940000165890.a
River trout	DUPLICATION
River trout	MODERN SPECIES	145										mapk6 (ENSSTUG00000024747)	USP50 (ENSSTUG00000024724)	ENSSTUG00000024710	ENSSTUG00000024600	hdc (ENSSTUG00000023126)	slc27a2a (ENSSTUG00000022965)	gatm (ENSSTUG00000022939) #22	ENSSTUG00000022932	pde8a (ENSSTUG00000022848)	ENSSTUG00000022829	FSD2 (ENSSTUG00000022799)	ENSSTUG00000022791	WHAMM (ENSSTUG00000022766)	HOMER2 (ENSSTUG00000022734)	RAMAC (ENSSTUG00000022713)	gatm (ENSSTUG00000022702) #22
River trout	MODERN SPECIES	145																gatm (ENSSTUG00000022702) #22	RAMAC (ENSSTUG00000022713)	HOMER2 (ENSSTUG00000022734)	WHAMM (ENSSTUG00000022766)	ENSSTUG00000022791	FSD2 (ENSSTUG00000022799)	ENSSTUG00000022829	pde8a (ENSSTUG00000022848)	ENSSTUG00000022932	gatm (ENSSTUG00000022939) #22	slc27a2a (ENSSTUG00000022965)	hdc (ENSSTUG00000023126)	ENSSTUG00000024600	ENSSTUG00000024710	USP50 (ENSSTUG00000024724)	mapk6 (ENSSTUG00000024747)
Atlantic salmon	MODERN SPECIES	18	ENSSSAG00000105914	ENSSSAG00000086985	ENSSSAG00000076581	ENSSSAG00000005625	ENSSSAG00000055518	tmod2 (ENSSSAG00000060985)	ENSSSAG00000116709	ENSSSAG00000055469	USP50 (ENSSSAG00000110764)	ENSSSAG00000121071	ENSSSAG00000111698	ENSSSAG00000091356	hdc (ENSSSAG00000042330)	slc27a2a (ENSSSAG00000122085)	s27a2 (ENSSSAG00000115180)	gatm (ENSSSAG00000055493) #22	pde8a (ENSSSAG00000094947)	ENSSSAG00000073264	ENSSSAG00000095380	WHAMM (ENSSSAG00000110696)	homer2 (ENSSSAG00000098183)	RAMAC (ENSSSAG00000069672)	crybgx (ENSSSAG00000069661)	lctla (ENSSSAG00000043842)	tipin (ENSSSAG00000043439)	dis3l (ENSSSAG00000121052)	ENSSSAG00000092940	RAB11A (ENSSSAG00000062971)	DENND4A (ENSSSAG00000082487)	SLC24A1 (ENSSSAG00000010183) ##12	HACD3 (ENSSSAG00000095799)
Salmo	ANCESTRAL SPECIES	188									ENSGT00940000154351.yb	ENSGT00940000160441	ENSGT00940000157542.e.b	ENSGT00940000163460.a.a.c.a.b	ENSGT00940000157938	ENSGT00940000164068.a.b.b.o	ENSGT00940000164068.a.b.a.a.a.e	ENSGT00390000011613.t #22	ENSGT00390000011613.s #22	ENSGT00940000156422.j	ENSGT00510000047412.b.f	ENSGT00940000158441.f	ENSGT00510000046704.b.b.a.d	ENSGT00940000157324.l	ENSGT00390000011190	ENSGT00940000165890.a
River trout	MODERN SPECIES	21	slc22a18 (ENSSTUG00000009401)	pex16 (ENSSTUG00000009372)	arfgap2 (ENSSTUG00000009272)	ENSSTUG00000009257	ENSSTUG00000009241	ENSSTUG00000009226	ENSSTUG00000009200	tmod2 (ENSSTUG00000009120)	mapk6 (ENSSTUG00000009095)	USP50 (ENSSTUG00000009048)	USP8 (ENSSTUG00000009019)	ENSSTUG00000009007	hdc (ENSSTUG00000008064)	slc27a2a (ENSSTUG00000007988)	ENSSTUG00000007666	gatm (ENSSTUG00000007634) #22	ENSSTUG00000007632	pde8a (ENSSTUG00000006015)	ENSSTUG00000005958	FSD2 (ENSSTUG00000005940)	WHAMM (ENSSTUG00000005932)	HOMER2 (ENSSTUG00000005871)	ENSSTUG00000005865	crybgx (ENSSTUG00000005860)	lctla (ENSSTUG00000005848)	tipin (ENSSTUG00000005839)	dis3l (ENSSTUG00000005812)	ENSSTUG00000005780	rab11a (ENSSTUG00000005754)	dennd4a (ENSSTUG00000004971)	SLC24A1 (ENSSTUG00000004931) ##12
Atlantic salmon	MODERN SPECIES	2	ENSSSAG00000009752	ENSSSAG00000098004	ENSSSAG00000108375	ENSSSAG00000089459	ENSSSAG00000118428	ENSSSAG00000088019	leo1 (ENSSSAG00000110496)	mapk6 (ENSSSAG00000086103)	USP50 (ENSSSAG00000108441)	ENSSSAG00000010195	ENSSSAG00000009637	ENSSSAG00000093071	hdc (ENSSSAG00000098647)	slc27a2a (ENSSSAG00000012340)	ENSSSAG00000108011	gatm (ENSSSAG00000069650) #22	pde8a (ENSSSAG00000097988)	ENSSSAG00000009779	FSD2 (ENSSSAG00000073255)	ENSSSAG00000092676	ENSSSAG00000121906	HOMER2 (ENSSSAG00000103439)	crybgx (ENSSSAG00000008876)	ENSSSAG00000008839	tipin (ENSSSAG00000082602)	ENSSSAG00000103573	RAB11A (ENSSSAG00000099276)	DENND4A (ENSSSAG00000100635)	SLC24A1 (ENSSSAG00000009849) ##12	HACD3 (ENSSSAG00000009594)	ENSSSAG00000099816
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00940000160333	ENSGT00390000017790	ENSGT01080000257714.b	ENSGT00940000155568	ENSGT00940000163723.A.e	ENSGT00940000163723.A.f.b	ENSGT01050000244900.a.a.b.eb.h	ENSGT00940000158280.l	ENSGT00550000074952	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000163460.a.a.c.a.b	ENSGT00940000157938.j.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422.i	ENSGT00940000158441	ENSGT00510000046704.b.b.a	ENSGT00940000157324.l	ENSGT00390000011190	ENSGT00940000165890	ENSGT00940000157369.b	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT00940000155333.A.a.i.a	ENSGT00940000154914.vb	ENSGT00940000155836.B.j	ENSGT01030000234532.B.e.b.e ##12	ENSGT00530000062962.b.a.e	ENSGT00940000155744.t.a
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	18	galr1b (ENSOMYG00000068843)	ENSOMYG00000034905	ENSOMYG00000077523	ENSOMYG00000068387	ENSOMYG00000072026	atp6v0d1 (ENSOMYG00000062310)	hsd11b2 (ENSOMYG00000035088)	ENSOMYG00000004677	USP50 (ENSOMYG00000004722)	ENSOMYG00000051725	ENSOMYG00000076732	ENSOMYG00000065259	hdc (ENSOMYG00000055036)	slc27a2a (ENSOMYG00000030348)	ENSOMYG00000060174	gatm (ENSOMYG00000040856) #22	pde8a (ENSOMYG00000058534)	ENSOMYG00000053548	ENSOMYG00000075465	ENSOMYG00000049883	FSD2 (ENSOMYG00000050212)	WHAMM (ENSOMYG00000067414)	homer2 (ENSOMYG00000000066)	ENSOMYG00000053924	crybgx (ENSOMYG00000049421)	lctla (ENSOMYG00000004788)	tipin (ENSOMYG00000050576)	dis3l (ENSOMYG00000048031)	ENSOMYG00000021812	ENSOMYG00000074521	RAB11A (ENSOMYG00000026657)
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000077260	ENSOMYG00000004192	ENSOMYG00000003351	ENSOMYG00000003441	ENSOMYG00000053221	ENSOMYG00000004444	ENSOMYG00000073125	ENSOMYG00000024703	ENSOMYG00000004588	USP50 (ENSOMYG00000004613)	ENSOMYG00000054987	ENSOMYG00000036605	hdc (ENSOMYG00000048576)	slc27a2a (ENSOMYG00000035881)	ENSOMYG00000073495	gatm (ENSOMYG00000058991) #22	ENSOMYG00000060984	pde8a (ENSOMYG00000074691)	ENSOMYG00000076233	ENSOMYG00000058176	ENSOMYG00000064324	ENSOMYG00000077619	ENSOMYG00000058373	FSD2 (ENSOMYG00000048469)	WHAMM (ENSOMYG00000057419)	homer2 (ENSOMYG00000063764)	ENSOMYG00000050671	crybgx (ENSOMYG00000048390)	lctla (ENSOMYG00000056022)	tipin (ENSOMYG00000074288)	dis3l (ENSOMYG00000052777)
Oncorhynchus_a	ANCESTRAL SPECIES	106	ENSGT00940000160333	ENSGT00390000017790	ENSGT01080000257714.b	ENSGT00940000155568	ENSGT00940000163723.A.e	ENSGT00940000163723.A.f.b	ENSGT01050000244900.a.a.b.eb.h	ENSGT00940000158280.l	ENSGT00550000074952.k	ENSGT00940000154351	ENSGT00940000160441	ENSGT00940000157542	ENSGT00940000163460.a.a.c.a.b	ENSGT00940000157938.j.b	ENSGT00940000164068.a.b.a.a.a	ENSGT00390000011613 #22	ENSGT00940000156422.i	ENSGT00940000158441	ENSGT00510000046704.b.b.b	ENSGT00940000157324.l	ENSGT00390000011190	ENSGT00940000165890	ENSGT00940000157369.b	ENSGT00390000005764	ENSGT00530000063106.B	ENSGT01030000234532.B.e.b.e ##12	ENSGT00530000062962.b.a.e	ENSGT00940000155744.t.a	ENSGT00940000156926.d	ENSGT00940000153246.a.a.a.d	ENSGT00940000160967.f
Coho salmon	DUPLICATION
Coho salmon	MODERN SPECIES	32	PEX16 (ENSOKIG00005036181)	ENSOKIG00005036243	arfgap2 (ENSOKIG00005036260)	ENSOKIG00005036401	ENSOKIG00005036436	ENSOKIG00005036557	ENSOKIG00005037624	LEO1 (ENSOKIG00005037738)	mapk6 (ENSOKIG00005037802)	USP50 (ENSOKIG00005037824)	ENSOKIG00005037888	ENSOKIG00005037954	ENSOKIG00005037965	hdc (ENSOKIG00005038039)	ENSOKIG00005039108	gatm (ENSOKIG00005039835) #22	pde8a (ENSOKIG00005039876)	ENSOKIG00005040000	ENSOKIG00005040012	FSD2 (ENSOKIG00005040033)	WHAMM (ENSOKIG00005040049)	HOMER2 (ENSOKIG00005040071)	ENSOKIG00005040199	crybgx (ENSOKIG00005040244)	lctla (ENSOKIG00005040258)	ENSOKIG00005040323	dis3l (ENSOKIG00005040437)	rab11a (ENSOKIG00005041589)	ENSOKIG00005041640	ENSOKIG00005041656	DENND4A (ENSOKIG00005041726)
Coho salmon	MODERN SPECIES	1453													hdc (ENSOKIG00005032872)	slc27a2a (ENSOKIG00005033441)	ENSOKIG00005034091	gatm (ENSOKIG00005034244) #22
Huchen	MODERN SPECIES	3454														ENSHHUG00000010444	ENSHHUG00000010546	gatm (ENSHHUG00000010585) #22
Northern pike	MODERN SPECIES	1	cars1 (ENSELUG00000020347)	slc22a18 (ENSELUG00000020269)	pex16 (ENSELUG00000020226)	arfgap2 (ENSELUG00000020186)	ENSELUG00000020152	ENSELUG00000020067	ENSELUG00000032105	ppfia1 (ENSELUG00000020126)	tmod2 (ENSELUG00000020038)	leo1 (ENSELUG00000019983)	mapk6 (ENSELUG00000019924)	USP50 (ENSELUG00000019889)	USP8 (ENSELUG00000019872)	hdc (ENSELUG00000019843)	slc27a2a (ENSELUG00000019801)	gatm (ENSELUG00000001472) #22	pde8a (ENSELUG00000019742)	ENSELUG00000019621	ENSELUG00000019658	WHAMM (ENSELUG00000019600)	ENSELUG00000019542	homer2 (ENSELUG00000019561)	crybgx (ENSELUG00000019531)	lctla (ENSELUG00000019497)	tipin (ENSELUG00000019453)	dis3l (ENSELUG00000019420)	ENSELUG00000019353	RAB11B (ENSELUG00000019240)	dennd4a (ENSELUG00000000821)	SLC24A1 (ENSELUG00000019158) ##12	HACD3 (ENSELUG00000019142)
Spotted gar	MODERN SPECIES	669	spata5l1 (ENSLOCG00000013121) #21	zgc:153317 (ENSLOCG00000013117) #20	slc30a4 (ENSLOCG00000013108) #19	bloc1s6 (ENSLOCG00000013103) #18	sqor (ENSLOCG00000013097) #17	mibp2 (ENSLOCG00000013090)	ENSLOCG00000013085	SPPL2A (ENSLOCG00000013070)	trpm7 (ENSLOCG00000013042)	ENSLOCG00000013040	USP8 (ENSLOCG00000013028)	gabpb1 (ENSLOCG00000013022)	hdc (ENSLOCG00000013010)	slc27a2a (ENSLOCG00000012998)	ENSLOCG00000012993	gatm (ENSLOCG00000012986) #22	pde8a (ENSLOCG00000012971)	ENSLOCG00000012968	FSD2 (ENSLOCG00000012962)	WHAMM (ENSLOCG00000012953)	homer2 (ENSLOCG00000012948)	RAMAC (ENSLOCG00000012944)	zgc:193812 (ENSLOCG00000012937)	ENSLOCG00000012927	BTBD1 (ENSLOCG00000012920)	TM6SF1 (ENSLOCG00000012911)	HDGFL3 (ENSLOCG00000012906)	BNC1 (ENSLOCG00000012902)	gjd6 (ENSLOCG00000017944)	sh3gl3a (ENSLOCG00000012899)	ENSLOCG00000012896
Reedfish	MODERN SPECIES	8	ENSECRG00000021916 #8	slc30a4 (ENSECRG00000021911) #19	bloc1s6 (ENSECRG00000021900) #18	sqor (ENSECRG00000021889) #17	mibp2 (ENSECRG00000021880)	ENSECRG00000021869	SPPL2A (ENSECRG00000021827)	trpm7 (ENSECRG00000021761)	ENSECRG00000021733	USP50 (ENSECRG00000021721)	USP8 (ENSECRG00000021700)	gabpb1 (ENSECRG00000021662)	hdc (ENSECRG00000021252)	slc27a2a (ENSECRG00000021203)	ENSECRG00000021181	gatm (ENSECRG00000021172) #22	pde8a (ENSECRG00000021121)	ENSECRG00000021077	FSD2 (ENSECRG00000021063)	WHAMM (ENSECRG00000021046)	HOMER2 (ENSECRG00000021026)	RAMAC (ENSECRG00000021018)	ENSECRG00000021009	zgc:193812 (ENSECRG00000020992)	ENSECRG00000020972	BTBD1 (ENSECRG00000020951)	TM6SF1 (ENSECRG00000020778)	HDGFL3 (ENSECRG00000020727)	BNC1 (ENSECRG00000020705)	sh3gl3a (ENSECRG00000020612)	gjd6 (ENSECRG00000020596)
Elephant shark	MODERN SPECIES	1490	arpin (ENSCMIG00000018893)	ENSCMIG00000018892	spata5l1 (ENSCMIG00000018891) #21	ENSCMIG00000018890 #20	slc30a4 (ENSCMIG00000018888) #19	BLOC1S6 (ENSCMIG00000018887) #18	sqor (ENSCMIG00000018881) #17	mibp2 (ENSCMIG00000018877)	ENSCMIG00000018874	SPPL2A (ENSCMIG00000018858)	trpm7 (ENSCMIG00000018835)	USP50 (ENSCMIG00000018807)	USP8 (ENSCMIG00000018799)	gabpb1 (ENSCMIG00000018784)	zgc:158482 (ENSCMIG00000018766)	gatm (ENSCMIG00000018754) #22	pde8a (ENSCMIG00000018732)	ENSCMIG00000018718	ENSCMIG00000018715	HOMER2 (ENSCMIG00000018710)	hacd3 (ENSCMIG00000018702)	ints14 (ENSCMIG00000018688)	SLC24A1 (ENSCMIG00000018682) ##12	dennd4a (ENSCMIG00000018666)	rab11a (ENSCMIG00000018649)	MEGF11 (ENSCMIG00000018640)	dis3l (ENSCMIG00000018578)	tipin (ENSCMIG00000018527)	map2k1 (ENSCMIG00000018523)	zwilch (ENSCMIG00000018499)	rpl4 (ENSCMIG00000018485)
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00390000011613 #22
Hagfish	MODERN SPECIES	995	ENSEBUG00000003582	ENSEBUG00000007598	ENSEBUG00000000930	ENSEBUG00000007330	ENSEBUG00000008868	me3 (ENSEBUG00000001502)	ENSEBUG00000005440	tmem135 (ENSEBUG00000002175)	ENSEBUG00000012912	ENSEBUG00000004361	ENSEBUG00000014722	ENSEBUG00000009860	nudc (ENSEBUG00000001914)	ENSEBUG00000002568	ENSEBUG00000015125	ENSEBUG00000007946 #22	mettl14 (ENSEBUG00000006504)	ENSEBUG00000005092	ENSEBUG00000015332	ENSEBUG00000006632	txnl4b (ENSEBUG00000006810)	ENSEBUG00000009064	ENSEBUG00000012056	rpl13a (ENSEBUG00000007234)	ENSEBUG00000004260	zgc:101858 (ENSEBUG00000003770)	ENSEBUG00000007638