Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00530000062962.b.a #22 Gnathostomata ANCESTRAL SPECIES 196 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000165890 ENSGT00390000010331 #32 Euteleostomi ANCESTRAL SPECIES 6 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00510000052431 ENSGT00390000017828 #10 ENSGT00390000018225.A ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Sarcopterygii ANCESTRAL SPECIES 9 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00510000052431 ENSGT00390000017828 #10 ENSGT00390000018225.A ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Tetrapoda ANCESTRAL SPECIES 11 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00510000052431 ENSGT00390000017828 #10 ENSGT00390000018225.A ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Amniota ANCESTRAL SPECIES 15 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00510000052431 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Mammalia ANCESTRAL SPECIES 28 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Theria ANCESTRAL SPECIES 22 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Eutheria ANCESTRAL SPECIES 8 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #36 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #36 Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Glires ANCESTRAL SPECIES 15 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Rodentia ANCESTRAL SPECIES 3 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Rodentia_B ANCESTRAL SPECIES 11 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Myomorpha ANCESTRAL SPECIES 25 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Muroidea ANCESTRAL SPECIES 23 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Muroidea_A ANCESTRAL SPECIES 6 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Murinae ANCESTRAL SPECIES 3 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Mus ANCESTRAL SPECIES 4 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Mus_A ANCESTRAL SPECIES 4 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Mus_B ANCESTRAL SPECIES 3 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828.s #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000154925.c.a ##30 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Mus_C ANCESTRAL SPECIES 8 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828.s #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000154925.c.a ##30 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 spretus MODERN SPECIES 18 Plekho2 (MGP_SPRETEiJ_G0033504) #7 Ankdd1a (MGP_SPRETEiJ_G0033503) #8 Spg21 (MGP_SPRETEiJ_G0033502) #9 Mtfmt (MGP_SPRETEiJ_G0033501) #10 Slc51b (MGP_SPRETEiJ_G0033500) #11 Rasl12 (MGP_SPRETEiJ_G0033499) #12 Kbtbd13 (MGP_SPRETEiJ_G0033498) #13 Ubap1l (MGP_SPRETEiJ_G0033497) #14 Pdcd7 (MGP_SPRETEiJ_G0033496) #15 Clpx (MGP_SPRETEiJ_G0033495) #16 Cilp (MGP_SPRETEiJ_G0033494) #17 Parp16 (MGP_SPRETEiJ_G0033493) #18 Igdcc3 (MGP_SPRETEiJ_G0033492) #19 Igdcc4 (MGP_SPRETEiJ_G0033491) #20 Dpp8 (MGP_SPRETEiJ_G0033490) #21 Hacd3 (MGP_SPRETEiJ_G0033489) #22 Ints14 (MGP_SPRETEiJ_G0033488) #23 Slc24a1 (MGP_SPRETEiJ_G0033487) #24 Dennd4a (MGP_SPRETEiJ_G0033486) #25 Rab11a (MGP_SPRETEiJ_G0033485) #26 Megf11 (MGP_SPRETEiJ_G0033484) #27 Dis3l (MGP_SPRETEiJ_G0033483) #28 Tipin (MGP_SPRETEiJ_G0033482) #29 MGP_SPRETEiJ_G0033481 #30 Map2k1 (MGP_SPRETEiJ_G0033480) #31 Snapc5 (MGP_SPRETEiJ_G0033479) #32 Rpl4 (MGP_SPRETEiJ_G0033478) #33 Zwilch (MGP_SPRETEiJ_G0033477) #34 Lctl (MGP_SPRETEiJ_G0033476) #35 Smad6 (MGP_SPRETEiJ_G0033475) #36 Smad3 (MGP_SPRETEiJ_G0033474) #37 Steppe mouse MODERN SPECIES 3365 Spg21 (ENSMSIG00000005730) #9 Mtfmt (ENSMSIG00000005704) #10 Slc51b (ENSMSIG00000005686) #11 Rasl12 (ENSMSIG00000005656) #12 Kbtbd13 (ENSMSIG00000005647) #13 ENSMSIG00000005605 #14 Pdcd7 (ENSMSIG00000005596) #15 ENSMSIG00000005574 ENSMSIG00000005568 Clpx (ENSMSIG00000005427) #16 Cilp (ENSMSIG00000005391) #17 Parp16 (ENSMSIG00000005362) #18 Igdcc3 (ENSMSIG00000005288) #19 Igdcc4 (ENSMSIG00000005197) #20 Dpp8 (ENSMSIG00000005153) #21 Hacd3 (ENSMSIG00000005101) #22 Ints14 (ENSMSIG00000005077) #23 Slc24a1 (ENSMSIG00000005039) #24 Dennd4a (ENSMSIG00000004975) #25 Rab11a (ENSMSIG00000004938) #26 Megf11 (ENSMSIG00000004481) #27 Dis3l (ENSMSIG00000004353) #28 Tipin (ENSMSIG00000004296) #29 Uchl4 (ENSMSIG00000004289) ##30 Map2k1 (ENSMSIG00000004246) #31 Snapc5 (ENSMSIG00000004231) #32 Rpl4 (ENSMSIG00000004124) #33 Zwilch (ENSMSIG00000003872) #34 Lctl (ENSMSIG00000003776) #35 ENSMSIG00000003769 ENSMSIG00000003749 Mouse MODERN SPECIES 18 Plekho2 (ENSMUSG00000050721) #7 Ankdd1a (ENSMUSG00000066510) #8 Spg21 (ENSMUSG00000032388) #9 Mtfmt (ENSMUSG00000059183) #10 Slc51b (ENSMUSG00000053862) #11 Rasl12 (ENSMUSG00000041696) #12 Kbtbd13 (ENSMUSG00000054978) #13 Ubap1l (ENSMUSG00000086228) #14 Pdcd7 (ENSMUSG00000041837) #15 Clpx (ENSMUSG00000015357) #16 Cilp (ENSMUSG00000042254) #17 Parp16 (ENSMUSG00000032392) #18 Igdcc3 (ENSMUSG00000032394) #19 Igdcc4 (ENSMUSG00000032816) #20 Dpp8 (ENSMUSG00000032393) #21 Hacd3 (ENSMUSG00000033629) #22 Ints14 (ENSMUSG00000034263) #23 Slc24a1 (ENSMUSG00000034452) #24 Dennd4a (ENSMUSG00000053641) #25 Rab11a (ENSMUSG00000004771) #26 Megf11 (ENSMUSG00000036466) #27 Dis3l (ENSMUSG00000032396) #28 Tipin (ENSMUSG00000032397) #29 Uchl4 (ENSMUSG00000035337) ##30 Map2k1 (ENSMUSG00000004936) #31 Snapc5 (ENSMUSG00000032398) #32 Rpl4 (ENSMUSG00000032399) #33 Zwilch (ENSMUSG00000032400) #34 Lctl (ENSMUSG00000032401) #35 Smad6 (ENSMUSG00000036867) #36 Smad3 (ENSMUSG00000032402) #37 Ryukyu mouse MODERN SPECIES 18 Plekho2 (MGP_CAROLIEiJ_G0032365) #7 Ankdd1a (MGP_CAROLIEiJ_G0032364) #8 Spg21 (MGP_CAROLIEiJ_G0032363) #9 Mtfmt (MGP_CAROLIEiJ_G0032362) #10 Slc51b (MGP_CAROLIEiJ_G0032361) #11 Rasl12 (MGP_CAROLIEiJ_G0032360) #12 Kbtbd13 (MGP_CAROLIEiJ_G0032359) #13 Ubap1l (MGP_CAROLIEiJ_G0032358) #14 Pdcd7 (MGP_CAROLIEiJ_G0032357) #15 Clpx (MGP_CAROLIEiJ_G0032356) #16 MGP_CAROLIEiJ_G0032355 Parp16 (MGP_CAROLIEiJ_G0032354) #18 Igdcc3 (MGP_CAROLIEiJ_G0032353) #19 Igdcc4 (MGP_CAROLIEiJ_G0032352) #20 Dpp8 (MGP_CAROLIEiJ_G0032351) #21 Hacd3 (MGP_CAROLIEiJ_G0032350) #22 Ints14 (MGP_CAROLIEiJ_G0032349) #23 Slc24a1 (MGP_CAROLIEiJ_G0032348) #24 Dennd4a (MGP_CAROLIEiJ_G0032347) #25 Rab11a (MGP_CAROLIEiJ_G0032346) #26 Megf11 (MGP_CAROLIEiJ_G0032345) #27 Dis3l (MGP_CAROLIEiJ_G0032344) #28 Tipin (MGP_CAROLIEiJ_G0032343) #29 MGP_CAROLIEiJ_G0032342 ##30 Map2k1 (MGP_CAROLIEiJ_G0032341) #31 Snapc5 (MGP_CAROLIEiJ_G0032340) #32 Rpl4 (MGP_CAROLIEiJ_G0032339) #33 Zwilch (MGP_CAROLIEiJ_G0032338) #34 Lctl (MGP_CAROLIEiJ_G0032337) #35 Smad6 (MGP_CAROLIEiJ_G0032336) #36 Smad3 (MGP_CAROLIEiJ_G0032335) #37 Shrew mouse MODERN SPECIES 1 Plekho2 (MGP_PahariEiJ_G0015230) #7 Ankdd1a (MGP_PahariEiJ_G0015229) #8 Spg21 (MGP_PahariEiJ_G0015228) #9 Mtfmt (MGP_PahariEiJ_G0015227) #10 Slc51b (MGP_PahariEiJ_G0015226) #11 Rasl12 (MGP_PahariEiJ_G0015225) #12 Kbtbd13 (MGP_PahariEiJ_G0015224) #13 Ubap1l (MGP_PahariEiJ_G0015223) #14 Pdcd7 (MGP_PahariEiJ_G0015222) #15 Clpx (MGP_PahariEiJ_G0015221) #16 MGP_PahariEiJ_G0015220 Parp16 (MGP_PahariEiJ_G0015219) #18 MGP_PahariEiJ_G0015218 #19 Igdcc4 (MGP_PahariEiJ_G0015217) #20 Dpp8 (MGP_PahariEiJ_G0015216) #21 Hacd3 (MGP_PahariEiJ_G0015215) #22 Ints14 (MGP_PahariEiJ_G0015214) #23 Slc24a1 (MGP_PahariEiJ_G0015213) #24 Dennd4a (MGP_PahariEiJ_G0015212) #25 Rab11a (MGP_PahariEiJ_G0015211) #26 Megf11 (MGP_PahariEiJ_G0015210) #27 Dis3l (MGP_PahariEiJ_G0015209) #28 Tipin (MGP_PahariEiJ_G0015208) #29 Map2k1 (MGP_PahariEiJ_G0015207) #31 Snapc5 (MGP_PahariEiJ_G0015206) #32 Rpl4 (MGP_PahariEiJ_G0015205) #33 Zwilch (MGP_PahariEiJ_G0015204) #34 Smad6 (MGP_PahariEiJ_G0015202) #36 Smad3 (MGP_PahariEiJ_G0015201) #37 Aagab (MGP_PahariEiJ_G0015200) Iqch (MGP_PahariEiJ_G0015199) Rat MODERN SPECIES 18 Ankdd1a (ENSRNOG00000015554) #8 Spg21 (ENSRNOG00000015019) #9 Mtfmt (ENSRNOG00000014602) #10 Slc51b (ENSRNOG00000028889) #11 Rasl12 (ENSRNOG00000032339) #12 AABR07070456.1 (ENSRNOG00000014383) #13 Ubap1l (ENSRNOG00000050979) #14 Pdcd7 (ENSRNOG00000014340) #15 Clpx (ENSRNOG00000030225) #16 Cilp (ENSRNOG00000029911) #17 Parp16 (ENSRNOG00000029127) #18 ENSRNOG00000063066 Igdcc3 (ENSRNOG00000030800) #19 Igdcc4 (ENSRNOG00000033496) #20 Dpp8 (ENSRNOG00000019105) #21 Hacd3 (ENSRNOG00000030232) #22 Ints14 (ENSRNOG00000012469) #23 Slc24a1 (ENSRNOG00000052051) #24 Dennd4a (ENSRNOG00000011739) #25 LOC120094392 (ENSRNOG00000071140) Rab11a (ENSRNOG00000011302) #26 Megf11 (ENSRNOG00000010634) #27 Dis3l (ENSRNOG00000010537) #28 Tipin (ENSRNOG00000043068) #29 Map2k1 (ENSRNOG00000010176) #31 Rpl4 (ENSRNOG00000009378) #33 Zwilch (ENSRNOG00000009303) #34 Lctl (ENSRNOG00000009193) #35 Smad6 (ENSRNOG00000009173) #36 Smad3 (ENSRNOG00000008620) #37 Aagab (ENSRNOG00000008424) Cricetidae ANCESTRAL SPECIES 4 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Cricetinae ANCESTRAL SPECIES 6 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.kb #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Chinese hamster chok1gshd MODERN SPECIES 284 Plekho2 (ENSCGRG00001003734) #7 Ankdd1a (ENSCGRG00001014311) #8 Spg21 (ENSCGRG00001022317) #9 Mtfmt (ENSCGRG00001010938) #10 Slc51b (ENSCGRG00001013856) #11 Rasl12 (ENSCGRG00001015470) #12 Kbtbd13 (ENSCGRG00001012125) #13 Ubap1l (ENSCGRG00001023243) #14 Pdcd7 (ENSCGRG00001011256) #15 Clpx (ENSCGRG00001020872) #16 Cilp (ENSCGRG00001023319) #17 Parp16 (ENSCGRG00001011381) #18 Igdcc3 (ENSCGRG00001015803) #19 Igdcc4 (ENSCGRG00001004819) #20 Dpp8 (ENSCGRG00001024771) #21 Hacd3 (ENSCGRG00001019214) #22 Ints14 (ENSCGRG00001022061) #23 Slc24a1 (ENSCGRG00001023812) #24 Dennd4a (ENSCGRG00001019979) #25 Rab11a (ENSCGRG00001023313) #26 Megf11 (ENSCGRG00001019210) #27 Dis3l (ENSCGRG00001017825) #28 Tipin (ENSCGRG00001018146) #29 Snapc5 (ENSCGRG00001013968) #32 Zwilch (ENSCGRG00001018206) #34 Lctl (ENSCGRG00001017716) #35 Smad6 (ENSCGRG00001002733) #36 Smad3 (ENSCGRG00001013999) #37 Aagab (ENSCGRG00001020082) Iqch (ENSCGRG00001006084) ENSCGRG00001000811 Golden Hamster MODERN SPECIES 672 Ankdd1a (ENSMAUG00000009278) #8 Spg21 (ENSMAUG00000011488) #9 Mtfmt (ENSMAUG00000019476) #10 Slc51b (ENSMAUG00000016209) #11 Rasl12 (ENSMAUG00000021367) #12 Kbtbd13 (ENSMAUG00000007549) #13 Ubap1l (ENSMAUG00000019477) #14 Pdcd7 (ENSMAUG00000010175) #15 Clpx (ENSMAUG00000018798) #16 ENSMAUG00000009833 Cilp (ENSMAUG00000019346) #17 Parp16 (ENSMAUG00000014432) #18 Igdcc3 (ENSMAUG00000019761) #19 Igdcc4 (ENSMAUG00000021589) #20 Dpp8 (ENSMAUG00000020059) #21 Hacd3 (ENSMAUG00000004278) #22 Ints14 (ENSMAUG00000020937) #23 Slc24a1 (ENSMAUG00000012813) #24 Dennd4a (ENSMAUG00000018527) #25 Rab11a (ENSMAUG00000018551) #26 Megf11 (ENSMAUG00000003129) #27 Dis3l (ENSMAUG00000008265) #28 Tipin (ENSMAUG00000012421) #29 Map2k1 (ENSMAUG00000011379) #31 Snapc5 (ENSMAUG00000008645) #32 Rpl4 (ENSMAUG00000018867) #33 Zwilch (ENSMAUG00000021210) #34 Lctl (ENSMAUG00000009957) #35 Smad6 (ENSMAUG00000009859) #36 Smad3 (ENSMAUG00000022258) #37 Aagab (ENSMAUG00000005383) Cricetidae_B ANCESTRAL SPECIES 24 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Northern American deer mouse MODERN SPECIES 20 Plekho2 (ENSPEMG00000020353) #7 Ankdd1a (ENSPEMG00000020958) #8 Spg21 (ENSPEMG00000021006) #9 Mtfmt (ENSPEMG00000021536) #10 Slc51b (ENSPEMG00000030201) #11 Rasl12 (ENSPEMG00000026265) #12 Kbtbd13 (ENSPEMG00000005949) #13 Ubap1l (ENSPEMG00000017986) #14 Pdcd7 (ENSPEMG00000001830) #15 Clpx (ENSPEMG00000021528) #16 Cilp (ENSPEMG00000021273) #17 Parp16 (ENSPEMG00000022071) #18 Igdcc3 (ENSPEMG00000021097) #19 Igdcc4 (ENSPEMG00000020857) #20 Dpp8 (ENSPEMG00000024195) #21 Hacd3 (ENSPEMG00000008076) #22 Ints14 (ENSPEMG00000008550) #23 Slc24a1 (ENSPEMG00000022814) #24 Dennd4a (ENSPEMG00000022452) #25 ENSPEMG00000021125 #26 Megf11 (ENSPEMG00000017797) #27 Dis3l (ENSPEMG00000001213) #28 Tipin (ENSPEMG00000002370) #29 Map2k1 (ENSPEMG00000007282) #31 Snapc5 (ENSPEMG00000007852) #32 Rpl4 (ENSPEMG00000012064) #33 Zwilch (ENSPEMG00000014485) #34 Lctl (ENSPEMG00000016229) #35 Smad6 (ENSPEMG00000017040) #36 Smad3 (ENSPEMG00000028676) #37 Aagab (ENSPEMG00000018465) Prairie vole MODERN SPECIES 13 Ankdd1a (ENSMOCG00000010903) #8 ENSMOCG00000008827 Spg21 (ENSMOCG00000018012) #9 Mtfmt (ENSMOCG00000022110) #10 Slc51b (ENSMOCG00000016544) #11 Rasl12 (ENSMOCG00000022051) #12 Kbtbd13 (ENSMOCG00000001263) #13 Ubap1l (ENSMOCG00000021453) #14 Pdcd7 (ENSMOCG00000007159) #15 Clpx (ENSMOCG00000011980) #16 Cilp (ENSMOCG00000022194) #17 Parp16 (ENSMOCG00000014635) #18 Igdcc3 (ENSMOCG00000017628) #19 Igdcc4 (ENSMOCG00000017733) #20 Dpp8 (ENSMOCG00000018103) #21 Hacd3 (ENSMOCG00000004995) #22 Ints14 (ENSMOCG00000020364) #23 Slc24a1 (ENSMOCG00000002968) #24 Dennd4a (ENSMOCG00000008521) #25 Rab11a (ENSMOCG00000021138) #26 Megf11 (ENSMOCG00000003573) #27 Dis3l (ENSMOCG00000005278) #28 Tipin (ENSMOCG00000010343) #29 Map2k1 (ENSMOCG00000013072) #31 Snapc5 (ENSMOCG00000015348) #32 ENSMOCG00000021901 #33 Zwilch (ENSMOCG00000017159) #34 Lctl (ENSMOCG00000004744) #35 Smad6 (ENSMOCG00000014458) #36 Smad3 (ENSMOCG00000018490) #37 Aagab (ENSMOCG00000021340) Upper Galilee mountains blind mole rat MODERN SPECIES 955 ENSNGAG00000003639 Ankdd1a (ENSNGAG00000009321) #8 ENSNGAG00000021527 #9 Mtfmt (ENSNGAG00000023307) #10 Slc51b (ENSNGAG00000016122) #11 Rasl12 (ENSNGAG00000019976) #12 ENSNGAG00000011880 #13 Ubap1l (ENSNGAG00000022357) #14 Pdcd7 (ENSNGAG00000018415) #15 Clpx (ENSNGAG00000001488) #16 Cilp (ENSNGAG00000019472) #17 Parp16 (ENSNGAG00000004884) #18 Igdcc3 (ENSNGAG00000012915) #19 Igdcc4 (ENSNGAG00000022064) #20 Dpp8 (ENSNGAG00000019579) #21 Hacd3 (ENSNGAG00000016924) #22 Ints14 (ENSNGAG00000007105) #23 Slc24a1 (ENSNGAG00000010674) #24 ENSNGAG00000022619 #25 Rab11a (ENSNGAG00000013726) #26 Megf11 (ENSNGAG00000011352) #27 Dis3l (ENSNGAG00000017008) #28 Tipin (ENSNGAG00000018237) #29 Map2k1 (ENSNGAG00000006894) #31 Snapc5 (ENSNGAG00000006133) #32 ENSNGAG00000006653 #33 Zwilch (ENSNGAG00000016626) #34 Lctl (ENSNGAG00000012911) #35 Smad6 (ENSNGAG00000021223) #36 ENSNGAG00000022756 Smad3 (ENSNGAG00000023535) #37 Lesser Egyptian jerboa MODERN SPECIES 92 Plekho2 (ENSJJAG00000014316) #7 Ankdd1a (ENSJJAG00000014309) #8 ENSJJAG00000013627 #9 Mtfmt (ENSJJAG00000021378) #10 Slc51b (ENSJJAG00000017452) #11 Rasl12 (ENSJJAG00000019387) #12 ENSJJAG00000011177 #13 ENSJJAG00000016922 #14 Pdcd7 (ENSJJAG00000012031) #15 Clpx (ENSJJAG00000012714) #16 Cilp (ENSJJAG00000012559) #17 Parp16 (ENSJJAG00000019303) #18 Igdcc3 (ENSJJAG00000010487) #19 Igdcc4 (ENSJJAG00000022092) #20 Dpp8 (ENSJJAG00000018252) #21 Hacd3 (ENSJJAG00000016608) #22 Ints14 (ENSJJAG00000005359) #23 Slc24a1 (ENSJJAG00000009344) #24 ENSJJAG00000012113 #25 ENSJJAG00000015445 #26 Megf11 (ENSJJAG00000023890) #27 ENSJJAG00000019234 Dis3l (ENSJJAG00000016147) #28 Tipin (ENSJJAG00000017947) #29 Map2k1 (ENSJJAG00000021452) #31 Snapc5 (ENSJJAG00000022013) #32 ENSJJAG00000013677 #33 Zwilch (ENSJJAG00000010189) #34 Lctl (ENSJJAG00000013579) #35 Smad6 (ENSJJAG00000019623) #36 Smad3 (ENSJJAG00000021414) #37 Kangaroo rat MODERN SPECIES 330 Pif1 (ENSDORG00000010176) Plekho2 (ENSDORG00000010180) #7 Ankdd1a (ENSDORG00000008259) #8 Spg21 (ENSDORG00000003605) #9 Mtfmt (ENSDORG00000004684) #10 Slc51b (ENSDORG00000023591) #11 Rasl12 (ENSDORG00000000119) #12 Kbtbd13 (ENSDORG00000024320) #13 Ubap1l (ENSDORG00000024217) #14 Pdcd7 (ENSDORG00000008214) #15 Clpx (ENSDORG00000016116) #16 Cilp (ENSDORG00000014410) #17 Parp16 (ENSDORG00000028265) #18 Igdcc4 (ENSDORG00000015148) #20 Dpp8 (ENSDORG00000009050) #21 Hacd3 (ENSDORG00000009307) #22 Ints14 (ENSDORG00000009309) #23 Slc24a1 (ENSDORG00000007185) #24 Dennd4a (ENSDORG00000002146) #25 ENSDORG00000028034 #26 ENSDORG00000026125 Megf11 (ENSDORG00000001008) #27 Dis3l (ENSDORG00000014909) #28 Tipin (ENSDORG00000028988) #29 Map2k1 (ENSDORG00000001301) #31 Snapc5 (ENSDORG00000030051) #32 Rpl4 (ENSDORG00000016287) #33 Zwilch (ENSDORG00000016288) #34 Lctl (ENSDORG00000016291) #35 Smad6 (ENSDORG00000028234) #36 ENSDORG00000026894 Rodentia_A ANCESTRAL SPECIES 2 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Hystricomorpha ANCESTRAL SPECIES 36 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.vb #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Hystricomorpha_a ANCESTRAL SPECIES 38 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.vb #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Hystricomorpha_b ANCESTRAL SPECIES 35 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.vb #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Long-tailed chinchilla MODERN SPECIES 157 ENSCLAG00000010665 GP9 (ENSCLAG00000012298) SPG21 (ENSCLAG00000011678) #9 MTFMT (ENSCLAG00000014170) #10 SLC51B (ENSCLAG00000011594) #11 RASL12 (ENSCLAG00000011152) #12 KBTBD13 (ENSCLAG00000018082) #13 UBAP1L (ENSCLAG00000010285) #14 PDCD7 (ENSCLAG00000007922) #15 CLPX (ENSCLAG00000016601) #16 CILP (ENSCLAG00000014495) #17 PARP16 (ENSCLAG00000012092) #18 IGDCC3 (ENSCLAG00000010244) #19 IGDCC4 (ENSCLAG00000007751) #20 DPP8 (ENSCLAG00000014937) #21 HACD3 (ENSCLAG00000010725) #22 INTS14 (ENSCLAG00000009395) #23 SLC24A1 (ENSCLAG00000013073) #24 DENND4A (ENSCLAG00000007003) #25 RAB11A (ENSCLAG00000007435) #26 MEGF11 (ENSCLAG00000013146) #27 DIS3L (ENSCLAG00000005741) #28 TIPIN (ENSCLAG00000004924) #29 MAP2K1 (ENSCLAG00000013042) #31 SNAPC5 (ENSCLAG00000011660) #32 RPL4 (ENSCLAG00000010827) #33 ZWILCH (ENSCLAG00000010124) #34 LCTL (ENSCLAG00000004564) #35 ENSCLAG00000005550 #36 SMAD3 (ENSCLAG00000005027) #37 AAGAB (ENSCLAG00000008364) Degu MODERN SPECIES 67 SPG21 (ENSODEG00000016267) #9 ENSODEG00000017695 #10 SLC51B (ENSODEG00000016552) #11 RASL12 (ENSODEG00000016297) #12 KBTBD13 (ENSODEG00000020550) #13 ENSODEG00000016276 #14 PDCD7 (ENSODEG00000016758) #15 ENSODEG00000016607 CLPX (ENSODEG00000016361) #16 CILP (ENSODEG00000016085) #17 ENSODEG00000020368 PARP16 (ENSODEG00000016601) #18 IGDCC3 (ENSODEG00000016285) #19 IGDCC4 (ENSODEG00000016455) #20 DPP8 (ENSODEG00000016356) #21 HACD3 (ENSODEG00000016975) #22 INTS14 (ENSODEG00000017006) #23 SLC24A1 (ENSODEG00000016047) #24 ENSODEG00000016544 #25 ENSODEG00000016435 ENSODEG00000016878 #26 MEGF11 (ENSODEG00000015967) #27 DIS3L (ENSODEG00000015811) #28 MAP2K1 (ENSODEG00000016739) #31 ENSODEG00000016495 #33 ZWILCH (ENSODEG00000016374) #34 LCTL (ENSODEG00000016271) #35 ENSODEG00000020317 SMAD6 (ENSODEG00000016272) #36 SMAD3 (ENSODEG00000015739) #37 ENSODEG00000015886 Guinea pig MODERN SPECIES 101 BNIP2 (ENSCPOG00000004962) GTF2A2 (ENSCPOG00000035441) GCNT3 (ENSCPOG00000022353) FAM81A (ENSCPOG00000015628) MYO1E (ENSCPOG00000002570) CCNB2 (ENSCPOG00000026977) RNF111 (ENSCPOG00000010550) SLTM (ENSCPOG00000026109) MINDY2 (ENSCPOG00000002287) CLPX (ENSCPOG00000003391) #16 CILP (ENSCPOG00000036223) #17 PARP16 (ENSCPOG00000025232) #18 IGDCC3 (ENSCPOG00000006751) #19 IGDCC4 (ENSCPOG00000004519) #20 DPP8 (ENSCPOG00000014124) #21 HACD3 (ENSCPOG00000013593) #22 INTS14 (ENSCPOG00000000764) #23 SLC24A1 (ENSCPOG00000013596) #24 DENND4A (ENSCPOG00000013602) #25 RAB11A (ENSCPOG00000037599) #26 MEGF11 (ENSCPOG00000006468) #27 DIS3L (ENSCPOG00000000250) #28 TIPIN (ENSCPOG00000000251) #29 MAP2K1 (ENSCPOG00000003053) #31 RPL4 (ENSCPOG00000003055) #33 ZWILCH (ENSCPOG00000001241) #34 LCTL (ENSCPOG00000001245) #35 ENSCPOG00000026722 ENSCPOG00000003533 ENSCPOG00000013176 ENSCPOG00000015403 Naked mole-rat female MODERN SPECIES 19 ENSHGLG00000048650 ENSHGLG00000016618 SPG21 (ENSHGLG00000015251) #9 ENSHGLG00000048707 #10 SLC51B (ENSHGLG00000040758) #11 ENSHGLG00000008881 #12 ENSHGLG00000007567 #13 UBAP1L (ENSHGLG00000005478) #14 PDCD7 (ENSHGLG00000005335) #15 CLPX (ENSHGLG00000008735) #16 CILP (ENSHGLG00000011932) #17 PARP16 (ENSHGLG00000010657) #18 IGDCC3 (ENSHGLG00000006674) #19 IGDCC4 (ENSHGLG00000017462) #20 DPP8 (ENSHGLG00000014997) #21 HACD3 (ENSHGLG00000011870) #22 INTS14 (ENSHGLG00000010722) #23 SLC24A1 (ENSHGLG00000008872) #24 DENND4A (ENSHGLG00000009810) #25 ENSHGLG00000044288 RAB11A (ENSHGLG00000048551) #26 MEGF11 (ENSHGLG00000011012) #27 ENSHGLG00000007770 #28 ENSHGLG00000005971 #29 ENSHGLG00000048822 ENSHGLG00000010036 #31 ENSHGLG00000040904 #32 ENSHGLG00000008054 #33 ZWILCH (ENSHGLG00000016059) #34 LCTL (ENSHGLG00000015669) #35 SMAD6 (ENSHGLG00000008453) #36 Sciuridae ANCESTRAL SPECIES 11 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Marmotini ANCESTRAL SPECIES 9 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857.w #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Marmotini_b ANCESTRAL SPECIES 4 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857.w #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Arctic ground squirrel MODERN SPECIES 33 ENSUPAG00010000549 ANKDD1A (ENSUPAG00010000557) #8 SPG21 (ENSUPAG00010000593) #9 MTFMT (ENSUPAG00010000615) #10 SLC51B (ENSUPAG00010000624) #11 RASL12 (ENSUPAG00010000634) #12 KBTBD13 (ENSUPAG00010000664) #13 UBAP1L (ENSUPAG00010000672) #14 PDCD7 (ENSUPAG00010000682) #15 CLPX (ENSUPAG00010000698) #16 CILP (ENSUPAG00010000774) #17 PARP16 (ENSUPAG00010000785) #18 IGDCC3 (ENSUPAG00010000811) #19 IGDCC4 (ENSUPAG00010000872) #20 DPP8 (ENSUPAG00010000912) #21 HACD3 (ENSUPAG00010001090) #22 INTS14 (ENSUPAG00010001105) #23 SLC24A1 (ENSUPAG00010001132) #24 DENND4A (ENSUPAG00010001204) #25 RAB11A (ENSUPAG00010001338) #26 MEGF11 (ENSUPAG00010001370) #27 DIS3L (ENSUPAG00010001911) #28 Squirrel MODERN SPECIES 71 ANKDD1A (ENSSTOG00000010088) #8 ENSSTOG00000010101 #9 MTFMT (ENSSTOG00000020944) #10 SLC51B (ENSSTOG00000010125) #11 RASL12 (ENSSTOG00000024973) #12 KBTBD13 (ENSSTOG00000010131) #13 UBAP1L (ENSSTOG00000019679) #14 PDCD7 (ENSSTOG00000003742) #15 CLPX (ENSSTOG00000003763) #16 CILP (ENSSTOG00000026112) #17 PARP16 (ENSSTOG00000008979) #18 IGDCC3 (ENSSTOG00000023391) #19 IGDCC4 (ENSSTOG00000002189) #20 DPP8 (ENSSTOG00000002203) #21 ENSSTOG00000025872 HACD3 (ENSSTOG00000002211) #22 INTS14 (ENSSTOG00000002217) #23 SLC24A1 (ENSSTOG00000002228) #24 DENND4A (ENSSTOG00000026966) #25 RAB11A (ENSSTOG00000015255) #26 MEGF11 (ENSSTOG00000015258) #27 DIS3L (ENSSTOG00000009158) #28 TIPIN (ENSSTOG00000009182) #29 MAP2K1 (ENSSTOG00000009190) #31 SNAPC5 (ENSSTOG00000009201) #32 RPL4 (ENSSTOG00000009221) #33 ZWILCH (ENSSTOG00000009607) #34 LCTL (ENSSTOG00000028073) #35 SMAD6 (ENSSTOG00000000696) #36 SMAD3 (ENSSTOG00000010286) #37 AAGAB (ENSSTOG00000010291) Alpin marmot MODERN SPECIES 7 PIF1 (ENSMMMG00000007343) PLEKHO2 (ENSMMMG00000007337) #7 ANKDD1A (ENSMMMG00000007304) #8 SPG21 (ENSMMMG00000007291) #9 ENSMMMG00000007284 #10 ENSMMMG00000007278 #11 RASL12 (ENSMMMG00000007263) #12 KBTBD13 (ENSMMMG00000007256) #13 UBAP1L (ENSMMMG00000007244) #14 CLPX (ENSMMMG00000007193) #16 CILP (ENSMMMG00000007122) #17 PARP16 (ENSMMMG00000007101) #18 IGDCC3 (ENSMMMG00000007025) #19 IGDCC4 (ENSMMMG00000006948) #20 DPP8 (ENSMMMG00000006899) #21 HACD3 (ENSMMMG00000006884) #22 INTS14 (ENSMMMG00000006868) #23 SLC24A1 (ENSMMMG00000006817) #24 DENND4A (ENSMMMG00000006769) #25 ENSMMMG00000006762 RAB11A (ENSMMMG00000006747) #26 MEGF11 (ENSMMMG00000006311) #27 DIS3L (ENSMMMG00000006220) #28 TIPIN (ENSMMMG00000006196) #29 MAP2K1 (ENSMMMG00000006173) #31 SNAPC5 (ENSMMMG00000006163) #32 RPL4 (ENSMMMG00000006109) #33 ENSMMMG00000006104 ZWILCH (ENSMMMG00000006077) #34 LCTL (ENSMMMG00000006061) #35 SMAD6 (ENSMMMG00000006032) #36 Eurasian red squirrel MODERN SPECIES 11 SPG21 (ENSSVLG00005022592) #9 MTFMT (ENSSVLG00005022671) #10 SLC51B (ENSSVLG00005022725) #11 RASL12 (ENSSVLG00005022769) #12 KBTBD13 (ENSSVLG00005022826) #13 UBAP1L (ENSSVLG00005022843) #14 PDCD7 (ENSSVLG00005022889) #15 CLPX (ENSSVLG00005022929) #16 CILP (ENSSVLG00005022969) #17 PARP16 (ENSSVLG00005023083) #18 ENSSVLG00005023161 IGDCC3 (ENSSVLG00005023208) #19 IGDCC4 (ENSSVLG00005023281) #20 DPP8 (ENSSVLG00005023347) #21 ENSSVLG00005023642 HACD3 (ENSSVLG00005023708) #22 INTS14 (ENSSVLG00005023820) #23 SLC24A1 (ENSSVLG00005023979) #24 DENND4A (ENSSVLG00005024160) #25 RAB11A (ENSSVLG00005024246) #26 MEGF11 (ENSSVLG00005024351) #27 DIS3L (ENSSVLG00005024622) #28 TIPIN (ENSSVLG00005024668) #29 MAP2K1 (ENSSVLG00005024707) #31 SNAPC5 (ENSSVLG00005024729) #32 ENSSVLG00005024744 #33 ZWILCH (ENSSVLG00005024833) #34 LCTL (ENSSVLG00005024912) #35 SMAD6 (ENSSVLG00005024946) #36 ENSSVLG00005024968 SMAD3 (ENSSVLG00005024991) #37 Lagomorpha ANCESTRAL SPECIES 7 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00950000183167.a.b.a ENSGT00940000153499.b.b #37 Rabbit MODERN SPECIES 8 ANKDD1A (ENSOCUG00000005353) #8 ENSOCUG00000016136 #9 MTFMT (ENSOCUG00000016147) #10 SLC51B (ENSOCUG00000010723) #11 RASL12 (ENSOCUG00000010729) #12 KBTBD13 (ENSOCUG00000022127) #13 UBAP1L (ENSOCUG00000029183) #14 ENSOCUG00000032347 PDCD7 (ENSOCUG00000007292) #15 CLPX (ENSOCUG00000007293) #16 CILP (ENSOCUG00000007302) #17 PARP16 (ENSOCUG00000007306) #18 IGDCC3 (ENSOCUG00000000310) #19 IGDCC4 (ENSOCUG00000000312) #20 DPP8 (ENSOCUG00000011751) #21 HACD3 (ENSOCUG00000007513) #22 INTS14 (ENSOCUG00000007520) #23 ENSOCUG00000027844 #24 DENND4A (ENSOCUG00000007953) #25 RAB11A (ENSOCUG00000014755) #26 MEGF11 (ENSOCUG00000014760) #27 DIS3L (ENSOCUG00000002206) #28 TIPIN (ENSOCUG00000002212) #29 ENSOCUG00000023060 MAP2K1 (ENSOCUG00000008782) #31 SNAPC5 (ENSOCUG00000039231) #32 ENSOCUG00000008794 #33 ZWILCH (ENSOCUG00000008800) #34 LCTL (ENSOCUG00000021771) #35 ENSOCUG00000006134 #36 ENSOCUG00000014186 Pika MODERN SPECIES 3550 IGDCC3 (ENSOPRG00000000533) #19 IGDCC4 (ENSOPRG00000000551) #20 DPP8 (ENSOPRG00000000578) #21 HACD3 (ENSOPRG00000000598) #22 INTS14 (ENSOPRG00000000613) #23 SLC24A1 (ENSOPRG00000000623) #24 ENSOPRG00000000630 #25 Tree shrew MODERN SPECIES 4089 ENSTBEG00000000605 #21 HACD3 (ENSTBEG00000000884) #22 INTS14 (ENSTBEG00000001112) #23 Primates ANCESTRAL SPECIES 2 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #36 Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Lemuriformes ANCESTRAL SPECIES 8 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Mouse lemur MODERN SPECIES 22 PIF1 (ENSMICG00000007373) PLEKHO2 (ENSMICG00000047618) #7 ANKDD1A (ENSMICG00000002854) #8 SPG21 (ENSMICG00000002862) #9 MTFMT (ENSMICG00000002867) #10 SLC51B (ENSMICG00000046031) #11 RASL12 (ENSMICG00000000624) #12 UBAP1L (ENSMICG00000034396) #14 PDCD7 (ENSMICG00000034171) #15 CLPX (ENSMICG00000014970) #16 CILP (ENSMICG00000015198) #17 PARP16 (ENSMICG00000004993) #18 IGDCC3 (ENSMICG00000003513) #19 IGDCC4 (ENSMICG00000046639) #20 DPP8 (ENSMICG00000000049) #21 HACD3 (ENSMICG00000003985) #22 INTS14 (ENSMICG00000003990) #23 SLC24A1 (ENSMICG00000003996) #24 ENSMICG00000034025 ENSMICG00000028970 ENSMICG00000044235 DENND4A (ENSMICG00000004000) #25 RAB11A (ENSMICG00000041504) #26 ENSMICG00000035335 MEGF11 (ENSMICG00000004354) #27 DIS3L (ENSMICG00000004374) #28 TIPIN (ENSMICG00000004386) #29 MAP2K1 (ENSMICG00000004393) #31 SNAPC5 (ENSMICG00000004401) #32 RPL4 (ENSMICG00000004419) #33 ZWILCH (ENSMICG00000004429) #34 Lemuriformes_a ANCESTRAL SPECIES 1 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00940000170330 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 Coquerels sifaka MODERN SPECIES 321 PLEKHO2 (ENSPCOG00000015719) #7 ANKDD1A (ENSPCOG00000020935) #8 SPG21 (ENSPCOG00000025563) #9 ENSPCOG00000019663 SLC51B (ENSPCOG00000020658) #11 RASL12 (ENSPCOG00000005311) #12 UBAP1L (ENSPCOG00000021980) #14 PDCD7 (ENSPCOG00000020644) #15 ENSPCOG00000017733 CLPX (ENSPCOG00000024478) #16 CILP (ENSPCOG00000019277) #17 PARP16 (ENSPCOG00000019309) #18 IGDCC3 (ENSPCOG00000012584) #19 IGDCC4 (ENSPCOG00000024000) #20 DPP8 (ENSPCOG00000013983) #21 HACD3 (ENSPCOG00000013603) #22 INTS14 (ENSPCOG00000022468) #23 SLC24A1 (ENSPCOG00000028227) #24 DENND4A (ENSPCOG00000015787) #25 ENSPCOG00000008655 MEGF11 (ENSPCOG00000016212) #27 ENSPCOG00000020947 DIS3L (ENSPCOG00000015776) #28 ENSPCOG00000024692 MAP2K1 (ENSPCOG00000019709) #31 SNAPC5 (ENSPCOG00000018513) #32 RPL4 (ENSPCOG00000018140) #33 ZWILCH (ENSPCOG00000014834) #34 LCTL (ENSPCOG00000018210) #35 AKAP4 (ENSPCOG00000016065) CCNB3 (ENSPCOG00000017115) Greater bamboo lemur MODERN SPECIES 105 HERC1 (ENSPSMG00000003501) FBXL22 (ENSPSMG00000003647) USP3 (ENSPSMG00000003840) CA12 (ENSPSMG00000004183) APH1B (ENSPSMG00000004224) RAB8B (ENSPSMG00000004246) ENSPSMG00000004263 LACTB (ENSPSMG00000004273) TPM1 (ENSPSMG00000005012) ENSPSMG00000005970 TLN2 (ENSPSMG00000006148) PARP16 (ENSPSMG00000006207) #18 IGDCC3 (ENSPSMG00000006222) #19 IGDCC4 (ENSPSMG00000006239) #20 DPP8 (ENSPSMG00000006379) #21 HACD3 (ENSPSMG00000006624) #22 INTS14 (ENSPSMG00000006782) #23 SLC24A1 (ENSPSMG00000006805) #24 DENND4A (ENSPSMG00000006976) #25 RAB11A (ENSPSMG00000007014) #26 MEGF11 (ENSPSMG00000007120) #27 Bushbaby MODERN SPECIES 126 PLEKHO2 (ENSOGAG00000010379) #7 SPG21 (ENSOGAG00000010385) #9 MTFMT (ENSOGAG00000010388) #10 SLC51B (ENSOGAG00000010390) #11 RASL12 (ENSOGAG00000010391) #12 KBTBD13 (ENSOGAG00000032677) #13 UBAP1L (ENSOGAG00000026705) #14 PDCD7 (ENSOGAG00000028484) #15 CLPX (ENSOGAG00000013626) #16 CILP (ENSOGAG00000033324) #17 PARP16 (ENSOGAG00000013641) #18 ENSOGAG00000027481 IGDCC3 (ENSOGAG00000013646) #19 IGDCC4 (ENSOGAG00000034827) #20 DPP8 (ENSOGAG00000013651) #21 HACD3 (ENSOGAG00000013661) #22 INTS14 (ENSOGAG00000013667) #23 SLC24A1 (ENSOGAG00000013674) #24 DENND4A (ENSOGAG00000013678) #25 RAB11A (ENSOGAG00000007642) #26 MEGF11 (ENSOGAG00000007644) #27 ENSOGAG00000034665 DIS3L (ENSOGAG00000024086) #28 ENSOGAG00000028488 #29 MAP2K1 (ENSOGAG00000015876) #31 SNAPC5 (ENSOGAG00000015881) #32 ENSOGAG00000015884 #33 ZWILCH (ENSOGAG00000015886) #34 LCTL (ENSOGAG00000015893) #35 SMAD6 (ENSOGAG00000015387) #36 ENSOGAG00000034467 Haplorrhini ANCESTRAL SPECIES 17 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #36 Tarsier MODERN SPECIES 994 DPP8 (ENSTSYG00000013318) #21 HACD3 (ENSTSYG00000005717) #22 INTS14 (ENSTSYG00000005722) #23 SLC24A1 (ENSTSYG00000006765) #24 Simiiformes ANCESTRAL SPECIES 2 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.a.a #33 ENSGT00390000013696 #34 ENSGT00910000147890 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 Catarrhini ANCESTRAL SPECIES 20 ENSGT00910000148680 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.a.a #33 ENSGT00390000013696 #34 ENSGT00910000147890 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 Cercopithecidae ANCESTRAL SPECIES 21 ENSGT00910000148680 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625.c #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.a.a #33 ENSGT00390000013696 #34 ENSGT00910000147890 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 Rhinopithecus ANCESTRAL SPECIES 49 ENSGT00530000063561 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625.c #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.a.a #33 ENSGT00390000013696 #34 ENSGT00910000147890 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 Golden snub-nosed monkey MODERN SPECIES 3011 PIF1 (ENSRROG00000031261) PLEKHO2 (ENSRROG00000037689) #7 ANKDD1A (ENSRROG00000040585) #8 SPG21 (ENSRROG00000001355) #9 MTFMT (ENSRROG00000023835) #10 SLC51B (ENSRROG00000010776) #11 RASL12 (ENSRROG00000040793) #12 UBAP1L (ENSRROG00000012092) #14 ENSRROG00000033371 #15 ENSRROG00000033036 #16 CILP (ENSRROG00000037983) #17 PARP16 (ENSRROG00000043358) #18 IGDCC3 (ENSRROG00000031915) #19 IGDCC4 (ENSRROG00000035002) #20 DPP8 (ENSRROG00000033287) #21 HACD3 (ENSRROG00000025311) #22 INTS14 (ENSRROG00000043135) #23 SLC24A1 (ENSRROG00000037268) #24 DENND4A (ENSRROG00000038960) #25 Black snub-nosed monkey MODERN SPECIES 1519 ENSRBIG00000028588 #16 CILP (ENSRBIG00000004854) #17 PARP16 (ENSRBIG00000040761) #18 IGDCC3 (ENSRBIG00000032739) #19 IGDCC4 (ENSRBIG00000024016) #20 DPP8 (ENSRBIG00000037591) #21 HACD3 (ENSRBIG00000040553) #22 INTS14 (ENSRBIG00000037004) #23 SLC24A1 (ENSRBIG00000029938) #24 DENND4A (ENSRBIG00000043812) #25 RAB11A (ENSRBIG00000035649) #26 MEGF11 (ENSRBIG00000032238) #27 DIS3L (ENSRBIG00000029360) #28 TIPIN (ENSRBIG00000035207) #29 MAP2K1 (ENSRBIG00000031516) #31 SNAPC5 (ENSRBIG00000033556) #32 ENSRBIG00000043139 #33 ZWILCH (ENSRBIG00000043121) #34 ENSRBIG00000038789 LCTL (ENSRBIG00000034724) #35 ENSRBIG00000044058 SMAD6 (ENSRBIG00000039005) #36 Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00910000148680 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625.c #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.a.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b Vervet Monkey MODERN SPECIES 18 PLEKHO2 (ENSCSAG00000012623) #7 ANKDD1A (ENSCSAG00000012637) #8 SPG21 (ENSCSAG00000012649) #9 MTFMT (ENSCSAG00000012690) #10 SLC51B (ENSCSAG00000012708) #11 RASL12 (ENSCSAG00000012718) #12 KBTBD13 (ENSCSAG00000019737) #13 UBAP1L (ENSCSAG00000012725) #14 PDCD7 (ENSCSAG00000012751) #15 CLPX (ENSCSAG00000012812) #16 CILP (ENSCSAG00000012835) #17 PARP16 (ENSCSAG00000012842) #18 IGDCC3 (ENSCSAG00000012887) #19 IGDCC4 (ENSCSAG00000012938) #20 DPP8 (ENSCSAG00000012960) #21 HACD3 (ENSCSAG00000012971) #22 INTS14 (ENSCSAG00000012981) #23 SLC24A1 (ENSCSAG00000013003) #24 DENND4A (ENSCSAG00000013032) #25 RAB11A (ENSCSAG00000013038) #26 MEGF11 (ENSCSAG00000013112) #27 DIS3L (ENSCSAG00000013140) #28 TIPIN (ENSCSAG00000013176) #29 MAP2K1 (ENSCSAG00000013191) #31 SNAPC5 (ENSCSAG00000013199) #32 ENSCSAG00000013205 #33 ZWILCH (ENSCSAG00000013218) #34 LCTL (ENSCSAG00000013237) #35 SMAD6 (ENSCSAG00000013248) #36 ENSCSAG00000013271 ENSCSAG00000019736 Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00910000148680 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625.c #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.a.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b Macaca ANCESTRAL SPECIES 1 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625.c #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.a.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b Pig-tailed macaque MODERN SPECIES 77 PLEKHO2 (ENSMNEG00000033712) #7 ANKDD1A (ENSMNEG00000037506) #8 SPG21 (ENSMNEG00000040418) #9 MTFMT (ENSMNEG00000040880) #10 SLC51B (ENSMNEG00000037631) #11 RASL12 (ENSMNEG00000043863) #12 KBTBD13 (ENSMNEG00000014591) #13 UBAP1L (ENSMNEG00000039075) #14 PDCD7 (ENSMNEG00000033283) #15 ENSMNEG00000030071 #16 CILP (ENSMNEG00000031330) #17 PARP16 (ENSMNEG00000028481) #18 IGDCC3 (ENSMNEG00000043800) #19 IGDCC4 (ENSMNEG00000039603) #20 DPP8 (ENSMNEG00000033598) #21 HACD3 (ENSMNEG00000037877) #22 INTS14 (ENSMNEG00000039516) #23 SLC24A1 (ENSMNEG00000041188) #24 DENND4A (ENSMNEG00000031159) #25 RAB11A (ENSMNEG00000043040) #26 MEGF11 (ENSMNEG00000028540) #27 DIS3L (ENSMNEG00000035066) #28 TIPIN (ENSMNEG00000031947) #29 MAP2K1 (ENSMNEG00000027299) #31 SNAPC5 (ENSMNEG00000032504) #32 ENSMNEG00000027886 #33 ZWILCH (ENSMNEG00000034955) #34 LCTL (ENSMNEG00000002923) #35 ENSMNEG00000031888 SMAD6 (ENSMNEG00000034598) #36 ENSMNEG00000032567 Macaca_a ANCESTRAL SPECIES 2 ENSGT01100000263539.b.b.a.a.a.b.b.a ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625.c #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.a.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b Rhesus MODERN SPECIES 17 ANKDD1A (ENSMMUG00000010948) #8 ENSMMUG00000051023 ENSMMUG00000049680 SPG21 (ENSMMUG00000010949) #9 MTFMT (ENSMMUG00000061537) #10 SLC51B (ENSMMUG00000049468) #11 RASL12 (ENSMMUG00000004029) #12 KBTBD13 (ENSMMUG00000004028) #13 PDCD7 (ENSMMUG00000006297) #15 CLPX (ENSMMUG00000006714) #16 CILP (ENSMMUG00000009659) #17 PARP16 (ENSMMUG00000005749) #18 IGDCC3 (ENSMMUG00000021783) #19 IGDCC4 (ENSMMUG00000021788) #20 DPP8 (ENSMMUG00000015447) #21 HACD3 (ENSMMUG00000015450) #22 INTS14 (ENSMMUG00000008095) #23 SLC24A1 (ENSMMUG00000022059) #24 DENND4A (ENSMMUG00000022056) #25 RAB11A (ENSMMUG00000008006) #26 MEGF11 (ENSMMUG00000008007) #27 DIS3L (ENSMMUG00000003693) #28 TIPIN (ENSMMUG00000003695) #29 MAP2K1 (ENSMMUG00000016840) #31 SNAPC5 (ENSMMUG00000060148) #32 RPL4 (ENSMMUG00000016844) #33 ZWILCH (ENSMMUG00000029588) #34 LCTL (ENSMMUG00000017447) #35 ENSMMUG00000063378 SMAD6 (ENSMMUG00000019018) #36 ENSMMUG00000057696 Crab-eating macaque MODERN SPECIES 17 SPG21 (ENSMFAG00000034518) #9 MTFMT (ENSMFAG00000000627) #10 SLC51B (ENSMFAG00000003137) #11 RASL12 (ENSMFAG00000040074) #12 UBAP1L (ENSMFAG00000042428) #14 PDCD7 (ENSMFAG00000031997) #15 CLPX (ENSMFAG00000032196) #16 ENSMFAG00000047489 CILP (ENSMFAG00000039594) #17 PARP16 (ENSMFAG00000051640) #18 ENSMFAG00000036137 ENSMFAG00000061482 IGDCC3 (ENSMFAG00000041666) #19 IGDCC4 (ENSMFAG00000031165) #20 DPP8 (ENSMFAG00000043661) #21 HACD3 (ENSMFAG00000032102) #22 INTS14 (ENSMFAG00000031689) #23 SLC24A1 (ENSMFAG00000000105) #24 DENND4A (ENSMFAG00000030601) #25 ENSMFAG00000047947 ENSMFAG00000060677 ENSMFAG00000055472 RAB11A (ENSMFAG00000000699) #26 MEGF11 (ENSMFAG00000038247) #27 DIS3L (ENSMFAG00000035628) #28 TIPIN (ENSMFAG00000031924) #29 MAP2K1 (ENSMFAG00000036522) #31 ENSMFAG00000063036 SNAPC5 (ENSMFAG00000046383) #32 RPL4 (ENSMFAG00000036412) #33 ZWILCH (ENSMFAG00000036529) #34 Cercopithecinae_b ANCESTRAL SPECIES 31 ENSGT00910000148680 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625.c #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.a.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b Olive baboon MODERN SPECIES 17 ENSPANG00000034589 ANKDD1A (ENSPANG00000016757) #8 SPG21 (ENSPANG00000016758) #9 MTFMT (ENSPANG00000016759) #10 SLC51B (ENSPANG00000016744) #11 RASL12 (ENSPANG00000016745) #12 KBTBD13 (ENSPANG00000007309) #13 UBAP1L (ENSPANG00000016746) #14 PDCD7 (ENSPANG00000016743) #15 CLPX (ENSPANG00000016723) #16 CILP (ENSPANG00000016724) #17 PARP16 (ENSPANG00000016725) #18 IGDCC3 (ENSPANG00000016709) #19 IGDCC4 (ENSPANG00000016710) #20 DPP8 (ENSPANG00000016711) #21 HACD3 (ENSPANG00000016698) #22 INTS14 (ENSPANG00000016699) #23 SLC24A1 (ENSPANG00000016700) #24 DENND4A (ENSPANG00000016685) #25 RAB11A (ENSPANG00000016687) #26 MEGF11 (ENSPANG00000016670) #27 ENSPANG00000024144 ENSPANG00000046531 DIS3L (ENSPANG00000016671) #28 TIPIN (ENSPANG00000016672) #29 MAP2K1 (ENSPANG00000016664) #31 SNAPC5 (ENSPANG00000016665) #32 ENSPANG00000016666 #33 ZWILCH (ENSPANG00000016646) #34 LCTL (ENSPANG00000016647) #35 SMAD6 (ENSPANG00000016648) #36 Cercopithecinae_d ANCESTRAL SPECIES 37 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625.c #16 ENSGT00390000008152.B.b #17 ENSGT00910000147481 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.a.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b Sooty mangabey MODERN SPECIES 336 ANKDD1A (ENSCATG00000035001) #8 SPG21 (ENSCATG00000043599) #9 MTFMT (ENSCATG00000024224) #10 SLC51B (ENSCATG00000043736) #11 RASL12 (ENSCATG00000042289) #12 KBTBD13 (ENSCATG00000021610) #13 UBAP1L (ENSCATG00000035325) #14 PDCD7 (ENSCATG00000032985) #15 ENSCATG00000041300 #16 CILP (ENSCATG00000007240) #17 ENSCATG00000031421 PARP16 (ENSCATG00000029968) #18 IGDCC3 (ENSCATG00000041269) #19 IGDCC4 (ENSCATG00000041870) #20 DPP8 (ENSCATG00000037927) #21 HACD3 (ENSCATG00000030252) #22 INTS14 (ENSCATG00000039488) #23 SLC24A1 (ENSCATG00000034684) #24 DENND4A (ENSCATG00000030001) #25 RAB11A (ENSCATG00000034739) #26 MEGF11 (ENSCATG00000032543) #27 DIS3L (ENSCATG00000044661) #28 TIPIN (ENSCATG00000040328) #29 MAP2K1 (ENSCATG00000038127) #31 SNAPC5 (ENSCATG00000029571) #32 ENSCATG00000031544 #33 ZWILCH (ENSCATG00000036836) #34 LCTL (ENSCATG00000033622) #35 ENSCATG00000019079 SMAD6 (ENSCATG00000002013) #36 ENSCATG00000035445 Drill MODERN SPECIES 253 PLEKHO2 (ENSMLEG00000020553) #7 ANKDD1A (ENSMLEG00000027812) #8 SPG21 (ENSMLEG00000039160) #9 MTFMT (ENSMLEG00000012111) #10 SLC51B (ENSMLEG00000026018) #11 RASL12 (ENSMLEG00000043142) #12 KBTBD13 (ENSMLEG00000023512) #13 UBAP1L (ENSMLEG00000037677) #14 ENSMLEG00000029629 #16 CILP (ENSMLEG00000042537) #17 ENSMLEG00000027861 PARP16 (ENSMLEG00000035171) #18 IGDCC3 (ENSMLEG00000038371) #19 IGDCC4 (ENSMLEG00000028139) #20 DPP8 (ENSMLEG00000039474) #21 HACD3 (ENSMLEG00000005763) #22 INTS14 (ENSMLEG00000027622) #23 SLC24A1 (ENSMLEG00000039031) #24 DENND4A (ENSMLEG00000041101) #25 RAB11A (ENSMLEG00000032505) #26 MEGF11 (ENSMLEG00000042443) #27 ENSMLEG00000039621 DIS3L (ENSMLEG00000034558) #28 TIPIN (ENSMLEG00000031419) #29 MAP2K1 (ENSMLEG00000034124) #31 SNAPC5 (ENSMLEG00000044262) #32 ENSMLEG00000043250 #33 ZWILCH (ENSMLEG00000031789) #34 LCTL (ENSMLEG00000011538) #35 ENSMLEG00000036582 ENSMLEG00000039010 Hominoidea ANCESTRAL SPECIES 20 ENSGT00910000148680 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.b #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00860000136046 ENSGT00940000153499.b.b #37 Gibbon MODERN SPECIES 21 ENSNLEG00000031983 ANKDD1A (ENSNLEG00000012524) #8 SPG21 (ENSNLEG00000012567) #9 MTFMT (ENSNLEG00000034733) #10 SLC51B (ENSNLEG00000012610) #11 RASL12 (ENSNLEG00000012613) #12 UBAP1L (ENSNLEG00000012621) #14 PDCD7 (ENSNLEG00000012628) #15 CLPX (ENSNLEG00000012633) #16 CILP (ENSNLEG00000012638) #17 ENSNLEG00000034448 ENSNLEG00000012643 #18 IGDCC3 (ENSNLEG00000012651) #19 IGDCC4 (ENSNLEG00000012668) #20 DPP8 (ENSNLEG00000012689) #21 HACD3 (ENSNLEG00000012725) #22 INTS14 (ENSNLEG00000012745) #23 ENSNLEG00000012767 #24 DENND4A (ENSNLEG00000012772) #25 RAB11A (ENSNLEG00000012853) #26 MEGF11 (ENSNLEG00000012863) #27 DIS3L (ENSNLEG00000012891) #28 TIPIN (ENSNLEG00000012909) #29 MAP2K1 (ENSNLEG00000012913) #31 SNAPC5 (ENSNLEG00000033124) #32 ENSNLEG00000012938 #33 ZWILCH (ENSNLEG00000012950) #34 LCTL (ENSNLEG00000012956) #35 SMAD6 (ENSNLEG00000032864) #36 ENSNLEG00000028836 SMAD3 (ENSNLEG00000012983) #37 Hominidae ANCESTRAL SPECIES 22 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.b #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00860000136046 ENSGT00940000153499.b.b #37 Orangutan MODERN SPECIES 6 PLEKHO2 (ENSPPYG00000006555) #7 ANKDD1A (ENSPPYG00000006556) #8 SPG21 (ENSPPYG00000006557) #9 MTFMT (ENSPPYG00000006558) #10 SLC51B (ENSPPYG00000037628) #11 RASL12 (ENSPPYG00000006560) #12 KBTBD13 (ENSPPYG00000006561) #13 UBAP1L (ENSPPYG00000030696) #14 PDCD7 (ENSPPYG00000006562) #15 CLPX (ENSPPYG00000006563) #16 CILP (ENSPPYG00000006564) #17 PARP16 (ENSPPYG00000006565) #18 IGDCC3 (ENSPPYG00000006566) #19 IGDCC4 (ENSPPYG00000006567) #20 DPP8 (ENSPPYG00000006568) #21 HACD3 (ENSPPYG00000006569) #22 INTS14 (ENSPPYG00000006570) #23 SLC24A1 (ENSPPYG00000006571) #24 DENND4A (ENSPPYG00000006572) #25 RAB11A (ENSPPYG00000006573) #26 MEGF11 (ENSPPYG00000039385) #27 DIS3L (ENSPPYG00000006575) #28 TIPIN (ENSPPYG00000031745) #29 MAP2K1 (ENSPPYG00000006576) #31 ENSPPYG00000032290 SNAPC5 (ENSPPYG00000040277) #32 RPL4 (ENSPPYG00000006578) #33 ZWILCH (ENSPPYG00000006579) #34 LCTL (ENSPPYG00000006580) #35 ENSPPYG00000006581 #36 ENSPPYG00000006582 Homo/Pan/Gorilla group ANCESTRAL SPECIES 22 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.b.a.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00910000147041 ENSGT00860000136046 Homo/Pan group ANCESTRAL SPECIES 21 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.b.a.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00910000147041 ENSGT00860000136046 Pan ANCESTRAL SPECIES 20 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00510000046986.m.a ENSGT00940000153487.b.b.i.a #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.b.a.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00910000147041 Chimpanzee MODERN SPECIES 6 PLEKHO2 (ENSPTRG00000007168) #7 ANKDD1A (ENSPTRG00000007169) #8 SPG21 (ENSPTRG00000007170) #9 MTFMT (ENSPTRG00000007171) #10 SLC51B (ENSPTRG00000007172) #11 RASL12 (ENSPTRG00000007173) #12 KBTBD13 (ENSPTRG00000042018) #13 UBAP1L (ENSPTRG00000039407) #14 PDCD7 (ENSPTRG00000045629) #15 CLPX (ENSPTRG00000007176) #16 CILP (ENSPTRG00000007177) #17 PARP16 (ENSPTRG00000007178) #18 IGDCC3 (ENSPTRG00000007179) #19 IGDCC4 (ENSPTRG00000007180) #20 DPP8 (ENSPTRG00000007182) #21 HACD3 (ENSPTRG00000007183) #22 INTS14 (ENSPTRG00000007184) #23 SLC24A1 (ENSPTRG00000007185) #24 DENND4A (ENSPTRG00000007186) #25 RAB11A (ENSPTRG00000044358) #26 MEGF11 (ENSPTRG00000007189) #27 DIS3L (ENSPTRG00000007191) #28 TIPIN (ENSPTRG00000007192) #29 ENSPTRG00000051889 MAP2K1 (ENSPTRG00000007193) #31 ENSPTRG00000049603 SNAPC5 (ENSPTRG00000007194) #32 RPL4 (ENSPTRG00000007195) #33 ZWILCH (ENSPTRG00000007196) #34 LCTL (ENSPTRG00000007197) #35 SMAD6 (ENSPTRG00000007198) #36 Bonobo MODERN SPECIES 6 PLEKHO2 (ENSPPAG00000021793) #7 ANKDD1A (ENSPPAG00000035127) #8 SPG21 (ENSPPAG00000014442) #9 MTFMT (ENSPPAG00000035142) #10 SLC51B (ENSPPAG00000029986) #11 RASL12 (ENSPPAG00000031385) #12 KBTBD13 (ENSPPAG00000010722) #13 ENSPPAG00000033811 #14 ENSPPAG00000035027 #15 CLPX (ENSPPAG00000040563) #16 CILP (ENSPPAG00000042751) #17 PARP16 (ENSPPAG00000030232) #18 IGDCC3 (ENSPPAG00000042057) #19 IGDCC4 (ENSPPAG00000036548) #20 DPP8 (ENSPPAG00000032419) #21 HACD3 (ENSPPAG00000014660) #22 INTS14 (ENSPPAG00000030391) #23 SLC24A1 (ENSPPAG00000042941) #24 DENND4A (ENSPPAG00000022752) #25 RAB11A (ENSPPAG00000030195) #26 MEGF11 (ENSPPAG00000043580) #27 DIS3L (ENSPPAG00000019888) #28 TIPIN (ENSPPAG00000033427) #29 ENSPPAG00000041842 ENSPPAG00000038145 MAP2K1 (ENSPPAG00000028577) #31 ENSPPAG00000033063 SNAPC5 (ENSPPAG00000041196) #32 ENSPPAG00000035309 #33 ZWILCH (ENSPPAG00000033861) #34 LCTL (ENSPPAG00000040836) #35 Human MODERN SPECIES 6 ENSG00000249240 ANKDD1A (ENSG00000166839) #8 SPG21 (ENSG00000090487) #9 MTFMT (ENSG00000103707) #10 SLC51B (ENSG00000186198) #11 RASL12 (ENSG00000103710) #12 KBTBD13 (ENSG00000234438) #13 UBAP1L (ENSG00000246922) #14 PDCD7 (ENSG00000090470) #15 CLPX (ENSG00000166855) #16 CILP (ENSG00000138615) #17 PARP16 (ENSG00000138617) #18 IGDCC3 (ENSG00000174498) #19 IGDCC4 (ENSG00000103742) #20 DPP8 (ENSG00000074603) #21 HACD3 (ENSG00000074696) #22 INTS14 (ENSG00000138614) #23 SLC24A1 (ENSG00000074621) #24 DENND4A (ENSG00000174485) #25 RAB11A (ENSG00000103769) #26 MEGF11 (ENSG00000157890) #27 DIS3L (ENSG00000166938) #28 TIPIN (ENSG00000075131) #29 MAP2K1 (ENSG00000169032) #31 SNAPC5 (ENSG00000174446) #32 RPL4 (ENSG00000174444) #33 ZWILCH (ENSG00000174442) #34 LCTL (ENSG00000188501) #35 SMAD6 (ENSG00000137834) #36 SMAD3 (ENSG00000166949) #37 AAGAB (ENSG00000103591) Gorilla MODERN SPECIES 6 PIF1 (ENSGGOG00000012347) PLEKHO2 (ENSGGOG00000005801) #7 ANKDD1A (ENSGGOG00000003179) #8 SPG21 (ENSGGOG00000004763) #9 MTFMT (ENSGGOG00000001124) #10 SLC51B (ENSGGOG00000015637) #11 RASL12 (ENSGGOG00000024110) #12 UBAP1L (ENSGGOG00000038121) #14 PDCD7 (ENSGGOG00000005814) #15 CLPX (ENSGGOG00000000326) #16 CILP (ENSGGOG00000042968) #17 PARP16 (ENSGGOG00000022851) #18 IGDCC3 (ENSGGOG00000010452) #19 IGDCC4 (ENSGGOG00000010463) #20 DPP8 (ENSGGOG00000012470) #21 HACD3 (ENSGGOG00000022837) #22 INTS14 (ENSGGOG00000003838) #23 SLC24A1 (ENSGGOG00000016389) #24 DENND4A (ENSGGOG00000014870) #25 ENSGGOG00000022841 RAB11A (ENSGGOG00000014252) #26 MEGF11 (ENSGGOG00000000293) #27 DIS3L (ENSGGOG00000001549) #28 TIPIN (ENSGGOG00000000061) #29 ENSGGOG00000024529 MAP2K1 (ENSGGOG00000003687) #31 ENSGGOG00000042752 SNAPC5 (ENSGGOG00000003693) #32 ENSGGOG00000003695 #33 ZWILCH (ENSGGOG00000003703) #34 LCTL (ENSGGOG00000006350) #35 Platyrrhini ANCESTRAL SPECIES 27 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a.a #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.a.a #33 ENSGT00390000013696 #34 ENSGT00910000147890 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Cebidae ANCESTRAL SPECIES 29 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00940000170330 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.a.a #33 ENSGT00390000013696 #34 ENSGT00910000147890 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Marmoset MODERN SPECIES 1 ENSCJAG00000075564 ANKDD1A (ENSCJAG00000031989) #8 ENSCJAG00000005282 #9 MTFMT (ENSCJAG00000006848) #10 SLC51B (ENSCJAG00000006852) #11 RASL12 (ENSCJAG00000080082) #12 KBTBD13 (ENSCJAG00000023428) #13 UBAP1L (ENSCJAG00000035221) #14 PDCD7 (ENSCJAG00000045698) #15 CLPX (ENSCJAG00000006870) #16 CILP (ENSCJAG00000047691) #17 PARP16 (ENSCJAG00000006929) #18 IGDCC3 (ENSCJAG00000006940) #19 IGDCC4 (ENSCJAG00000006951) #20 DPP8 (ENSCJAG00000006987) #21 HACD3 (ENSCJAG00000007084) #22 INTS14 (ENSCJAG00000007118) #23 SLC24A1 (ENSCJAG00000007180) #24 DENND4A (ENSCJAG00000007209) #25 RAB11A (ENSCJAG00000042037) #26 ENSCJAG00000083582 MEGF11 (ENSCJAG00000007353) #27 DIS3L (ENSCJAG00000007411) #28 ENSCJAG00000085355 MAP2K1 (ENSCJAG00000007460) #31 SNAPC5 (ENSCJAG00000070895) #32 ENSCJAG00000007491 #33 ZWILCH (ENSCJAG00000007524) #34 LCTL (ENSCJAG00000007558) #35 SMAD6 (ENSCJAG00000044644) #36 SMAD3 (ENSCJAG00000002088) #37 Cebidae_a ANCESTRAL SPECIES 39 ENSGT00530000063561 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.cb.a.a.a #33 ENSGT00390000013696 #34 ENSGT00910000147890 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Capuchin MODERN SPECIES 485 MTFMT (ENSCCAG00000018534) #10 SLC51B (ENSCCAG00000031349) #11 RASL12 (ENSCCAG00000037599) #12 ENSCCAG00000019927 UBAP1L (ENSCCAG00000037075) #14 PDCD7 (ENSCCAG00000026810) #15 ENSCCAG00000028918 #16 CILP (ENSCCAG00000021521) #17 PARP16 (ENSCCAG00000032095) #18 IGDCC3 (ENSCCAG00000029122) #19 IGDCC4 (ENSCCAG00000034061) #20 DPP8 (ENSCCAG00000023015) #21 HACD3 (ENSCCAG00000037841) #22 INTS14 (ENSCCAG00000030079) #23 SLC24A1 (ENSCCAG00000024899) #24 DENND4A (ENSCCAG00000036137) #25 ENSCCAG00000032078 RAB11A (ENSCCAG00000021286) #26 MEGF11 (ENSCCAG00000029113) #27 DIS3L (ENSCCAG00000037964) #28 ENSCCAG00000018227 #31 Bolivian squirrel monkey MODERN SPECIES 179 ENSSBOG00000023129 ANKDD1A (ENSSBOG00000006335) #8 SPG21 (ENSSBOG00000021959) #9 MTFMT (ENSSBOG00000024674) #10 SLC51B (ENSSBOG00000023480) #11 RASL12 (ENSSBOG00000032264) #12 UBAP1L (ENSSBOG00000026917) #14 PDCD7 (ENSSBOG00000020378) #15 CLPX (ENSSBOG00000023525) #16 CILP (ENSSBOG00000034310) #17 PARP16 (ENSSBOG00000032698) #18 IGDCC3 (ENSSBOG00000030768) #19 IGDCC4 (ENSSBOG00000027481) #20 ENSSBOG00000019694 DPP8 (ENSSBOG00000031844) #21 HACD3 (ENSSBOG00000025352) #22 INTS14 (ENSSBOG00000033678) #23 SLC24A1 (ENSSBOG00000035560) #24 DENND4A (ENSSBOG00000021504) #25 RAB11A (ENSSBOG00000017326) #26 MEGF11 (ENSSBOG00000026335) #27 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 599 MTFMT (ENSANAG00000030327) #10 SLC51B (ENSANAG00000025993) #11 RASL12 (ENSANAG00000027475) #12 UBAP1L (ENSANAG00000029321) #14 PDCD7 (ENSANAG00000020593) #15 CLPX (ENSANAG00000023812) #16 CILP (ENSANAG00000022242) #17 PARP16 (ENSANAG00000026820) #18 IGDCC3 (ENSANAG00000021787) #19 IGDCC4 (ENSANAG00000026571) #20 DPP8 (ENSANAG00000038141) #21 ENSANAG00000026926 #22 INTS14 (ENSANAG00000038417) #23 SLC24A1 (ENSANAG00000016940) #24 DENND4A (ENSANAG00000037563) #25 RAB11A (ENSANAG00000008429) #26 MEGF11 (ENSANAG00000031211) #27 DIS3L (ENSANAG00000024523) #28 ENSANAG00000030739 #29 MAP2K1 (ENSANAG00000023179) #31 ENSANAG00000023149 #32 ENSANAG00000029866 #33 ZWILCH (ENSANAG00000037776) #34 LCTL (ENSANAG00000029715) #35 ENSANAG00000038383 IL33 (ENSANAG00000019780) ENSANAG00000033312 Mas night monkey MODERN SPECIES 185 ENSANAG00000007809 #22 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #36 Eulipotyphla ANCESTRAL SPECIES 381 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 Common shrew MODERN SPECIES 5577 DPP8 (ENSSARG00000007676) #21 ENSSARG00000007714 #22 INTS14 (ENSSARG00000007722) #23 Hedgehog MODERN SPECIES 7467 ENSEEUG00000014934 #22 INTS14 (ENSEEUG00000015000) #23 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #36 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Suina ANCESTRAL SPECIES 12 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Pig MODERN SPECIES MALT1 (ENSSSCG00000004917) ALPK2 (ENSSSCG00000004918) NEDD4L (ENSSSCG00000004919) ATP8B1 (ENSSSCG00000004921) SLC51B (ENSSSCG00000004923) #11 RASL12 (ENSSSCG00000038071) #12 KBTBD13 (ENSSSCG00000035667) #13 UBAP1L (ENSSSCG00000035506) #14 PDCD7 (ENSSSCG00000004926) #15 CLPX (ENSSSCG00000004927) #16 CILP (ENSSSCG00000004928) #17 PARP16 (ENSSSCG00000004929) #18 IGDCC3 (ENSSSCG00000054127) #19 IGDCC4 (ENSSSCG00000004931) #20 DPP8 (ENSSSCG00000004934) #21 HACD3 (ENSSSCG00000004935) #22 INTS14 (ENSSSCG00000004936) #23 SLC24A1 (ENSSSCG00000004937) #24 DENND4A (ENSSSCG00000004938) #25 RAB11A (ENSSSCG00000032312) #26 MEGF11 (ENSSSCG00000004939) #27 DIS3L (ENSSSCG00000004941) #28 TIPIN (ENSSSCG00000004942) #29 MAP2K1 (ENSSSCG00000004943) #31 SNAPC5 (ENSSSCG00000038941) #32 RPL4 (ENSSSCG00000004945) #33 ZWILCH (ENSSSCG00000004946) #34 ENSSSCG00000051767 LCTL (ENSSSCG00000004947) #35 SMAD6 (ENSSSCG00000004948) #36 SMAD3 (ENSSSCG00000004952) #37 Chacoan peccary MODERN SPECIES 786 MALT1 (ENSCWAG00000006556) ALPK2 (ENSCWAG00000006468) NEDD4L (ENSCWAG00000003914) ATP8B1 (ENSCWAG00000003691) SLC51B (ENSCWAG00000019198) #11 RASL12 (ENSCWAG00000019157) #12 KBTBD13 (ENSCWAG00000019145) #13 UBAP1L (ENSCWAG00000019106) #14 PDCD7 (ENSCWAG00000019076) #15 CLPX (ENSCWAG00000019024) #16 CILP (ENSCWAG00000019001) #17 PARP16 (ENSCWAG00000018965) #18 IGDCC3 (ENSCWAG00000018736) #19 IGDCC4 (ENSCWAG00000018683) #20 DPP8 (ENSCWAG00000018161) #21 HACD3 (ENSCWAG00000017975) #22 INTS14 (ENSCWAG00000017595) #23 SLC24A1 (ENSCWAG00000017106) #24 DENND4A (ENSCWAG00000016363) #25 RAB11A (ENSCWAG00000016259) #26 MEGF11 (ENSCWAG00000015726) #27 DIS3L (ENSCWAG00000015597) #28 TIPIN (ENSCWAG00000015560) #29 MAP2K1 (ENSCWAG00000015519) #31 SNAPC5 (ENSCWAG00000015485) #32 RPL4 (ENSCWAG00000015376) #33 ZWILCH (ENSCWAG00000015266) #34 LCTL (ENSCWAG00000015109) #35 SMAD6 (ENSCWAG00000015079) #36 SMAD3 (ENSCWAG00000015026) #37 AAGAB (ENSCWAG00000014993) Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.xc #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Cetacea ANCESTRAL SPECIES 2 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.xc.b #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 Odontoceti ANCESTRAL SPECIES 2 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.xc.b #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 Sperm whale MODERN SPECIES 2 RBPMS2 (ENSPCTG00005012971) ENSPCTG00005013043 #8 SPG21 (ENSPCTG00005013161) #9 MTFMT (ENSPCTG00005013322) #10 SLC51B (ENSPCTG00005013568) #11 RASL12 (ENSPCTG00005013690) #12 KBTBD13 (ENSPCTG00005013835) #13 UBAP1L (ENSPCTG00005013861) #14 PDCD7 (ENSPCTG00005013950) #15 CLPX (ENSPCTG00005014028) #16 CILP (ENSPCTG00005014102) #17 PARP16 (ENSPCTG00005014147) #18 IGDCC3 (ENSPCTG00005014269) #19 IGDCC4 (ENSPCTG00005014441) #20 DPP8 (ENSPCTG00005014761) #21 HACD3 (ENSPCTG00005015026) #22 INTS14 (ENSPCTG00005015317) #23 SLC24A1 (ENSPCTG00005015689) #24 DENND4A (ENSPCTG00005016168) #25 RAB11A (ENSPCTG00005016434) #26 MEGF11 (ENSPCTG00005016590) #27 DIS3L (ENSPCTG00005017408) #28 TIPIN (ENSPCTG00005017493) #29 MAP2K1 (ENSPCTG00005017538) #31 SNAPC5 (ENSPCTG00005017569) #32 ENSPCTG00005017611 #33 ZWILCH (ENSPCTG00005017727) #34 LCTL (ENSPCTG00005017782) #35 ENSPCTG00005018004 SMAD6 (ENSPCTG00005018032) #36 ENSPCTG00005018068 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392.a #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.xc.b #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392.a #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.xc.b #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 Monodontidae ANCESTRAL SPECIES 27 ENSGT00530000063561 ENSGT00530000063760.a #7 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392.a #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.xc.b #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 Beluga whale MODERN SPECIES 20 PIF1 (ENSDLEG00000008546) PLEKHO2 (ENSDLEG00000008575) #7 SPG21 (ENSDLEG00000008610) #9 MTFMT (ENSDLEG00000008641) #10 SLC51B (ENSDLEG00000008675) #11 RASL12 (ENSDLEG00000008693) #12 KBTBD13 (ENSDLEG00000008734) #13 UBAP1L (ENSDLEG00000008757) #14 PDCD7 (ENSDLEG00000008786) #15 CLPX (ENSDLEG00000008818) #16 CILP (ENSDLEG00000008922) #17 PARP16 (ENSDLEG00000008951) #18 IGDCC3 (ENSDLEG00000009011) #19 IGDCC4 (ENSDLEG00000009168) #20 DPP8 (ENSDLEG00000009245) #21 HACD3 (ENSDLEG00000009324) #22 INTS14 (ENSDLEG00000009368) #23 SLC24A1 (ENSDLEG00000009406) #24 DENND4A (ENSDLEG00000009569) #25 RAB11A (ENSDLEG00000009643) #26 MEGF11 (ENSDLEG00000009720) #27 DIS3L (ENSDLEG00000009982) #28 TIPIN (ENSDLEG00000010313) #29 ENSDLEG00000010343 MAP2K1 (ENSDLEG00000010364) #31 SNAPC5 (ENSDLEG00000010421) #32 RPL4 (ENSDLEG00000010430) #33 ZWILCH (ENSDLEG00000010482) #34 LCTL (ENSDLEG00000010607) #35 ENSDLEG00000010647 ENSDLEG00000010657 Narwhal MODERN SPECIES 308 PIF1 (ENSMMNG00015011099) PLEKHO2 (ENSMMNG00015011123) #7 ENSMMNG00015011156 ENSMMNG00015011175 #8 MTFMT (ENSMMNG00015011203) #10 SLC51B (ENSMMNG00015011224) #11 RASL12 (ENSMMNG00015011250) #12 KBTBD13 (ENSMMNG00015011265) #13 UBAP1L (ENSMMNG00015011279) #14 PDCD7 (ENSMMNG00015006276) #15 CILP (ENSMMNG00015006369) #17 PARP16 (ENSMMNG00015006524) #18 IGDCC3 (ENSMMNG00015006574) #19 IGDCC4 (ENSMMNG00015006606) #20 DPP8 (ENSMMNG00015006705) #21 HACD3 (ENSMMNG00015006843) #22 INTS14 (ENSMMNG00015006934) #23 SLC24A1 (ENSMMNG00015007028) #24 DENND4A (ENSMMNG00015007114) #25 RAB11A (ENSMMNG00015007170) #26 MEGF11 (ENSMMNG00015007280) #27 DIS3L (ENSMMNG00015007393) #28 TIPIN (ENSMMNG00015007474) #29 ENSMMNG00015007536 MAP2K1 (ENSMMNG00015007579) #31 SNAPC5 (ENSMMNG00015007601) #32 ENSMMNG00015007652 #33 ZWILCH (ENSMMNG00015007746) #34 LCTL (ENSMMNG00015007784) #35 ENSMMNG00015007816 SMAD6 (ENSMMNG00015007869) #36 Vaquita MODERN SPECIES 11 PLEKHO2 (ENSPSNG00000003679) #7 ENSPSNG00000003661 #8 SPG21 (ENSPSNG00000003632) #9 MTFMT (ENSPSNG00000003605) #10 SLC51B (ENSPSNG00000003589) #11 RASL12 (ENSPSNG00000003572) #12 KBTBD13 (ENSPSNG00000003554) #13 UBAP1L (ENSPSNG00000003535) #14 PDCD7 (ENSPSNG00000003524) #15 CLPX (ENSPSNG00000003510) #16 CILP (ENSPSNG00000003465) #17 PARP16 (ENSPSNG00000003434) #18 IGDCC3 (ENSPSNG00000003386) #19 IGDCC4 (ENSPSNG00000003316) #20 DPP8 (ENSPSNG00000003202) #21 HACD3 (ENSPSNG00000003119) #22 INTS14 (ENSPSNG00000003047) #23 SLC24A1 (ENSPSNG00000002890) #24 DENND4A (ENSPSNG00000002770) #25 ENSPSNG00000002715 RAB11A (ENSPSNG00000002694) #26 MEGF11 (ENSPSNG00000002539) #27 ENSPSNG00000002464 #28 TIPIN (ENSPSNG00000002436) #29 MAP2K1 (ENSPSNG00000002407) #31 SNAPC5 (ENSPSNG00000002388) #32 ENSPSNG00000002352 #33 ZWILCH (ENSPSNG00000002336) #34 LCTL (ENSPSNG00000002318) #35 ENSPSNG00000002306 SMAD6 (ENSPSNG00000002293) #36 Dolphin MODERN SPECIES 2020 IGDCC3 (ENSTTRG00000011813) #19 IGDCC4 (ENSTTRG00000011838) #20 DPP8 (ENSTTRG00000011856) #21 HACD3 (ENSTTRG00000011863) #22 INTS14 (ENSTTRG00000011869) #23 SLC24A1 (ENSTTRG00000011873) #24 DENND4A (ENSTTRG00000011877) #25 RAB11A (ENSTTRG00000011885) #26 MEGF11 (ENSTTRG00000011888) #27 Blue whale MODERN SPECIES 11 PIF1 (ENSBMSG00010005687) PLEKHO2 (ENSBMSG00010005672) #7 ENSBMSG00010005663 #8 SPG21 (ENSBMSG00010005631) #9 MTFMT (ENSBMSG00010005614) #10 SLC51B (ENSBMSG00010005596) #11 KBTBD13 (ENSBMSG00010005585) #13 UBAP1L (ENSBMSG00010005534) #14 PDCD7 (ENSBMSG00010005492) #15 CLPX (ENSBMSG00010005401) #16 CILP (ENSBMSG00010005283) #17 PARP16 (ENSBMSG00010005241) #18 IGDCC3 (ENSBMSG00010005178) #19 IGDCC4 (ENSBMSG00010005162) #20 DPP8 (ENSBMSG00010004802) #21 HACD3 (ENSBMSG00010004707) #22 INTS14 (ENSBMSG00010004651) #23 SLC24A1 (ENSBMSG00010004497) #24 DENND4A (ENSBMSG00010004402) #25 RAB11A (ENSBMSG00010004363) #26 MEGF11 (ENSBMSG00010004218) #27 DIS3L (ENSBMSG00010004171) #28 ENSBMSG00010004151 #29 ENSBMSG00010004137 MAP2K1 (ENSBMSG00010004109) #31 ENSBMSG00010004081 #32 ENSBMSG00010004041 #33 ZWILCH (ENSBMSG00010004025) #34 LCTL (ENSBMSG00010003979) #35 SMAD6 (ENSBMSG00010003960) #36 SMAD3 (ENSBMSG00010003929) #37 Pecora ANCESTRAL SPECIES 6 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.xc #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Yarkand deer MODERN SPECIES 3 ENSCHYG00000006677 PTGER2 (ENSCHYG00000006703) SPG21 (ENSCHYG00000006758) #9 MTFMT (ENSCHYG00000006870) #10 SLC51B (ENSCHYG00000006898) #11 RASL12 (ENSCHYG00000006929) #12 KBTBD13 (ENSCHYG00000006975) #13 UBAP1L (ENSCHYG00000007000) #14 PDCD7 (ENSCHYG00000007035) #15 CLPX (ENSCHYG00000007103) #16 CILP (ENSCHYG00000007285) #17 ENSCHYG00000007376 #18 IGDCC3 (ENSCHYG00000007443) #19 IGDCC4 (ENSCHYG00000007622) #20 DPP8 (ENSCHYG00000007762) #21 HACD3 (ENSCHYG00000008236) #22 INTS14 (ENSCHYG00000008447) #23 SLC24A1 (ENSCHYG00000008613) #24 DENND4A (ENSCHYG00000008838) #25 ENSCHYG00000009117 ENSCHYG00000009145 #26 MEGF11 (ENSCHYG00000009296) #27 DIS3L (ENSCHYG00000010099) #28 TIPIN (ENSCHYG00000010297) #29 MAP2K1 (ENSCHYG00000010364) #31 ENSCHYG00000010432 SNAPC5 (ENSCHYG00000010450) #32 ENSCHYG00000010506 #33 ZWILCH (ENSCHYG00000010774) #34 LCTL (ENSCHYG00000011283) #35 ENSCHYG00000011323 Percora_a ANCESTRAL SPECIES 8 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.xc #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Bovidae ANCESTRAL SPECIES 7 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.xc #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Bovinae ANCESTRAL SPECIES 33 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.ib #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.xc #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Bos ANCESTRAL SPECIES 31 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.ib #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.xc.e.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Bos_b ANCESTRAL SPECIES 28 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.ib #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.xc.e.a #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Hybrid Bos Indicus MODERN SPECIES 1 TXNDC16 (ENSBIXG00005008420) PTGER2 (ENSBIXG00005008392) SPG21 (ENSBIXG00005008355) #9 MTFMT (ENSBIXG00005008282) #10 SLC51B (ENSBIXG00005008262) #11 RASL12 (ENSBIXG00005008245) #12 KBTBD13 (ENSBIXG00005008220) #13 UBAP1L (ENSBIXG00005008208) #14 PDCD7 (ENSBIXG00005008169) #15 CILP (ENSBIXG00005008107) #17 PARP16 (ENSBIXG00005008021) #18 IGDCC3 (ENSBIXG00005007974) #19 IGDCC4 (ENSBIXG00005007962) #20 DPP8 (ENSBIXG00005007925) #21 DENND4A (ENSBIXG00005007862) #25 HACD3 (ENSBIXG00005029324) #22 INTS14 (ENSBIXG00005029402) #23 SLC24A1 (ENSBIXG00005029443) #24 ENSBIXG00005029457 RAB11A (ENSBIXG00005029469) #26 MEGF11 (ENSBIXG00005029582) #27 DIS3L (ENSBIXG00005029839) #28 TIPIN (ENSBIXG00005029852) #29 ENSBIXG00005029869 #31 SNAPC5 (ENSBIXG00005029881) #32 ENSBIXG00005029889 #33 ZWILCH (ENSBIXG00005029921) #34 LCTL (ENSBIXG00005029961) #35 SMAD6 (ENSBIXG00005030012) #36 SMAD3 (ENSBIXG00005030065) #37 AAGAB (ENSBIXG00005030085) Cow MODERN SPECIES 1 GPR137C (ENSBTAG00000000821) TXNDC16 (ENSBTAG00000010399) PTGER2 (ENSBTAG00000002163) SPG21 (ENSBTAG00000011540) #9 MTFMT (ENSBTAG00000021630) #10 SLC51B (ENSBTAG00000003737) #11 RASL12 (ENSBTAG00000000062) #12 KBTBD13 (ENSBTAG00000017471) #13 UBAP1L (ENSBTAG00000051351) #14 PDCD7 (ENSBTAG00000039658) #15 CLPX (ENSBTAG00000008386) #16 PARP16 (ENSBTAG00000012352) #18 IGDCC3 (ENSBTAG00000008828) #19 IGDCC4 (ENSBTAG00000006440) #20 DPP8 (ENSBTAG00000014807) #21 HACD3 (ENSBTAG00000015155) #22 INTS14 (ENSBTAG00000015158) #23 SLC24A1 (ENSBTAG00000025826) #24 DENND4A (ENSBTAG00000017095) #25 RAB11A (ENSBTAG00000018959) #26 MEGF11 (ENSBTAG00000034140) #27 DIS3L (ENSBTAG00000000371) #28 TIPIN (ENSBTAG00000000372) #29 MAP2K1 (ENSBTAG00000033983) #31 SNAPC5 (ENSBTAG00000005210) #32 RPL4 (ENSBTAG00000005211) #33 ZWILCH (ENSBTAG00000005213) #34 LCTL (ENSBTAG00000005214) #35 ENSBTAG00000050356 SMAD6 (ENSBTAG00000000625) #36 SMAD3 (ENSBTAG00000012599) #37 Bos_a ANCESTRAL SPECIES 26 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.ib #26 ENSGT00940000154914.hb #26 ENSGT00940000165165 ENSGT00940000162492.x ENSGT00950000182841.b.a.a.a.d.b.a.a.a.b ENSGT00940000158538 ENSGT00940000163515 ENSGT00950000182841.b.a.a.a.d.b.a.b ENSGT00530000063186.a ENSGT00390000003231.b ENSGT00940000160244 ENSGT00940000155009.i Domestic yak MODERN SPECIES 2 PTGER2 (ENSBGRG00000004014) SPG21 (ENSBGRG00000003878) #9 MTFMT (ENSBGRG00000003791) #10 SLC51B (ENSBGRG00000003756) #11 RASL12 (ENSBGRG00000003705) #12 KBTBD13 (ENSBGRG00000003675) #13 ENSBGRG00000003640 UBAP1L (ENSBGRG00000003616) #14 PDCD7 (ENSBGRG00000025646) #15 CLPX (ENSBGRG00000025615) #16 CILP (ENSBGRG00000025584) #17 PARP16 (ENSBGRG00000025545) #18 IGDCC3 (ENSBGRG00000025511) #19 IGDCC4 (ENSBGRG00000025454) #20 DPP8 (ENSBGRG00000025360) #21 HACD3 (ENSBGRG00000025307) #22 INTS14 (ENSBGRG00000025180) #23 SLC24A1 (ENSBGRG00000025095) #24 ENSBGRG00000025078 DENND4A (ENSBGRG00000024953) #25 ENSBGRG00000024884 #26 MEGF11 (ENSBGRG00000024819) #27 DIS3L (ENSBGRG00000024760) #28 TIPIN (ENSBGRG00000024730) #29 MAP2K1 (ENSBGRG00000024678) #31 SNAPC5 (ENSBGRG00000024649) #32 ENSBGRG00000024489 #33 ZWILCH (ENSBGRG00000024356) #34 LCTL (ENSBGRG00000024229) #35 SMAD6 (ENSBGRG00000024050) #36 SMAD3 (ENSBGRG00000023965) #37 Wild yak MODERN SPECIES 1147 ENSBMUG00000004055 TXNDC16 (ENSBMUG00000004085) PTGER2 (ENSBMUG00000004113) SPG21 (ENSBMUG00000004643) #9 MTFMT (ENSBMUG00000004677) #10 SLC51B (ENSBMUG00000004707) #11 RASL12 (ENSBMUG00000004727) #12 ENSBMUG00000004737 #13 ENSBMUG00000004770 ENSBMUG00000004785 #15 CILP (ENSBMUG00000004840) #17 PARP16 (ENSBMUG00000004892) #18 IGDCC3 (ENSBMUG00000004930) #19 IGDCC4 (ENSBMUG00000004971) #20 DPP8 (ENSBMUG00000005098) #21 HACD3 (ENSBMUG00000005161) #22 INTS14 (ENSBMUG00000005195) #23 SLC24A1 (ENSBMUG00000005281) #24 DENND4A (ENSBMUG00000005355) #25 RAB11A (ENSBMUG00000005380) #26 MEGF11 (ENSBMUG00000005468) #27 American bison MODERN SPECIES 2972 GPR137C (ENSBBBG00000006657) TXNDC16 (ENSBBBG00000025167) PTGER2 (ENSBBBG00000025180) SPG21 (ENSBBBG00000007770) #9 MTFMT (ENSBBBG00000025276) #10 SLC51B (ENSBBBG00000025287) #11 RASL12 (ENSBBBG00000007855) #12 ENSBBBG00000006712 #13 PDCD7 (ENSBBBG00000007861) #15 CLPX (ENSBBBG00000025450) #16 CILP (ENSBBBG00000025485) #17 PARP16 (ENSBBBG00000009370) #18 IGDCC3 (ENSBBBG00000001479) #19 IGDCC4 (ENSBBBG00000009376) #20 DPP8 (ENSBBBG00000001480) #21 HACD3 (ENSBBBG00000009384) #22 INTS14 (ENSBBBG00000001482) #23 SLC24A1 (ENSBBBG00000009385) #24 DENND4A (ENSBBBG00000009388) #25 ENSBBBG00000001484 #26 MEGF11 (ENSBBBG00000009393) #27 DIS3L (ENSBBBG00000001485) #28 ENSBBBG00000009401 MAP2K1 (ENSBBBG00000009402) #31 SNAPC5 (ENSBBBG00000009405) #32 RPL4 (ENSBBBG00000009410) #33 ZWILCH (ENSBBBG00000007486) #34 LCTL (ENSBBBG00000009415) #35 SMAD6 (ENSBBBG00000001493) #36 SMAD3 (ENSBBBG00000009419) #37 AAGAB (ENSBBBG00000009422) Caprinae ANCESTRAL SPECIES 30 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.o #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.xc #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Rambouillet Sheep MODERN SPECIES 23 PTGER2 (ENSOARG00020005033) SPG21 (ENSOARG00020005066) #9 MTFMT (ENSOARG00020005121) #10 SLC51B (ENSOARG00020005165) #11 RASL12 (ENSOARG00020005185) #12 KBTBD13 (ENSOARG00020005214) #13 UBAP1L (ENSOARG00020005231) #14 PDCD7 (ENSOARG00020005266) #15 ENSOARG00020005294 CLPX (ENSOARG00020005303) #16 CILP (ENSOARG00020005386) #17 PARP16 (ENSOARG00020005448) #18 IGDCC3 (ENSOARG00020005562) #19 IGDCC4 (ENSOARG00020005613) #20 DPP8 (ENSOARG00020005690) #21 HACD3 (ENSOARG00020005830) #22 INTS14 (ENSOARG00020006021) #23 SLC24A1 (ENSOARG00020006188) #24 DENND4A (ENSOARG00020006221) #25 ENSOARG00020006812 #26 MEGF11 (ENSOARG00020006928) #27 DIS3L (ENSOARG00020007756) #28 TIPIN (ENSOARG00020007825) #29 MAP2K1 (ENSOARG00020007890) #31 SNAPC5 (ENSOARG00020007973) #32 RPL4 (ENSOARG00020008040) #33 ZWILCH (ENSOARG00020008203) #34 LCTL (ENSOARG00020008384) #35 SMAD6 (ENSOARG00020008552) #36 SMAD3 (ENSOARG00020008589) #37 ENSOARG00020008703 Goat MODERN SPECIES 1 TXNDC16 (ENSCHIG00000016034) PTGER2 (ENSCHIG00000026600) SPG21 (ENSCHIG00000008189) #9 MTFMT (ENSCHIG00000015447) #10 SLC51B (ENSCHIG00000026254) #11 RASL12 (ENSCHIG00000011540) #12 KBTBD13 (ENSCHIG00000006594) #13 UBAP1L (ENSCHIG00000019099) #14 PDCD7 (ENSCHIG00000014756) #15 CLPX (ENSCHIG00000023656) #16 CILP (ENSCHIG00000012679) #17 PARP16 (ENSCHIG00000011861) #18 IGDCC3 (ENSCHIG00000013215) #19 IGDCC4 (ENSCHIG00000021302) #20 DPP8 (ENSCHIG00000013527) #21 HACD3 (ENSCHIG00000020855) #22 INTS14 (ENSCHIG00000012971) #23 SLC24A1 (ENSCHIG00000023644) #24 ENSCHIG00000015128 DENND4A (ENSCHIG00000024015) #25 ENSCHIG00000012183 #26 ENSCHIG00000006809 MEGF11 (ENSCHIG00000023140) #27 DIS3L (ENSCHIG00000009744) #28 ENSCHIG00000000481 #29 MAP2K1 (ENSCHIG00000021340) #31 SNAPC5 (ENSCHIG00000011315) #32 RPL4 (ENSCHIG00000012421) #33 ZWILCH (ENSCHIG00000015830) #34 LCTL (ENSCHIG00000017181) #35 SMAD6 (ENSCHIG00000012651) #36 Siberian musk deer MODERN SPECIES 70 ENSMMSG00000019166 SPG21 (ENSMMSG00000019185) #9 MTFMT (ENSMMSG00000019272) #10 SLC51B (ENSMMSG00000019303) #11 RASL12 (ENSMMSG00000019343) #12 KBTBD13 (ENSMMSG00000019390) #13 UBAP1L (ENSMMSG00000019405) #14 PDCD7 (ENSMMSG00000019450) #15 CLPX (ENSMMSG00000019476) #16 CILP (ENSMMSG00000019540) #17 PARP16 (ENSMMSG00000019586) #18 IGDCC3 (ENSMMSG00000000099) #19 IGDCC4 (ENSMMSG00000000147) #20 DPP8 (ENSMMSG00000000258) #21 ENSMMSG00000000445 HACD3 (ENSMMSG00000000485) #22 INTS14 (ENSMMSG00000000581) #23 SLC24A1 (ENSMMSG00000000735) #24 ENSMMSG00000000783 DENND4A (ENSMMSG00000000845) #25 ENSMMSG00000000971 #26 MEGF11 (ENSMMSG00000001023) #27 DIS3L (ENSMMSG00000001148) #28 TIPIN (ENSMMSG00000001178) #29 MAP2K1 (ENSMMSG00000001210) #31 SNAPC5 (ENSMMSG00000001249) #32 ENSMMSG00000001277 #33 ZWILCH (ENSMMSG00000001358) #34 LCTL (ENSMMSG00000001442) #35 SMAD6 (ENSMMSG00000001473) #36 SMAD3 (ENSMMSG00000001493) #37 Camelidae ANCESTRAL SPECIES 83 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147890 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Arabian camel MODERN SPECIES 32 PLEKHO2 (ENSCDRG00005001250) #7 ANKDD1A (ENSCDRG00005001275) #8 SPG21 (ENSCDRG00005001313) #9 MTFMT (ENSCDRG00005001402) #10 SLC51B (ENSCDRG00005001421) #11 RASL12 (ENSCDRG00005001442) #12 ENSCDRG00005001457 #13 ENSCDRG00005001464 #14 PDCD7 (ENSCDRG00005001491) #15 CLPX (ENSCDRG00005001522) #16 CILP (ENSCDRG00005001549) #17 PARP16 (ENSCDRG00005001584) #18 IGDCC3 (ENSCDRG00005001651) #19 IGDCC4 (ENSCDRG00005001726) #20 DPP8 (ENSCDRG00005001839) #21 HACD3 (ENSCDRG00005001929) #22 INTS14 (ENSCDRG00005001994) #23 SLC24A1 (ENSCDRG00005002129) #24 DENND4A (ENSCDRG00005002286) #25 RAB11A (ENSCDRG00005002443) #26 MEGF11 (ENSCDRG00005002479) #27 DIS3L (ENSCDRG00005002526) #28 TIPIN (ENSCDRG00005002562) #29 MAP2K1 (ENSCDRG00005002580) #31 SNAPC5 (ENSCDRG00005002604) #32 ENSCDRG00005002627 #33 ZWILCH (ENSCDRG00005002673) #34 LCTL (ENSCDRG00005002712) #35 ENSCDRG00005002745 ENSCDRG00005002755 #36 SMAD3 (ENSCDRG00005002780) #37 Alpaca MODERN SPECIES 2210 DPP8 (ENSVPAG00000004541) #21 HACD3 (ENSVPAG00000004546) #22 INTS14 (ENSVPAG00000004548) #23 ENSVPAG00000004549 #24 DENND4A (ENSVPAG00000004550) #25 RAB11A (ENSVPAG00000004556) #26 Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 ENSGT00860000136046 Carnivora ANCESTRAL SPECIES ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00860000136046 ENSGT00940000153499.b.b #37 Caniformia ANCESTRAL SPECIES 12 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Caniformia_b ANCESTRAL SPECIES 15 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Mustelinae ANCESTRAL SPECIES 66 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Ferret MODERN SPECIES 228 PIF1 (ENSMPUG00000000549) PLEKHO2 (ENSMPUG00000000547) #7 ANKDD1A (ENSMPUG00000000544) #8 SPG21 (ENSMPUG00000000528) #9 MTFMT (ENSMPUG00000000527) #10 RASL12 (ENSMPUG00000000526) #12 KBTBD13 (ENSMPUG00000019445) #13 UBAP1L (ENSMPUG00000000525) #14 PDCD7 (ENSMPUG00000000523) #15 CLPX (ENSMPUG00000000518) #16 CILP (ENSMPUG00000000506) #17 PARP16 (ENSMPUG00000000505) #18 IGDCC3 (ENSMPUG00000000488) #19 IGDCC4 (ENSMPUG00000000484) #20 DPP8 (ENSMPUG00000000480) #21 HACD3 (ENSMPUG00000000475) #22 INTS14 (ENSMPUG00000000472) #23 SLC24A1 (ENSMPUG00000000468) #24 DENND4A (ENSMPUG00000000388) #25 RAB11A (ENSMPUG00000000387) #26 MEGF11 (ENSMPUG00000000383) #27 DIS3L (ENSMPUG00000000378) #28 TIPIN (ENSMPUG00000000365) #29 MAP2K1 (ENSMPUG00000000363) #31 SNAPC5 (ENSMPUG00000000356) #32 ENSMPUG00000000337 #33 ZWILCH (ENSMPUG00000000333) #34 LCTL (ENSMPUG00000000312) #35 ENSMPUG00000000309 SMAD6 (ENSMPUG00000000307) #36 SMAD3 (ENSMPUG00000000304) #37 American mink MODERN SPECIES 46 ANKDD1A (ENSNVIG00000017875) #8 SPG21 (ENSNVIG00000017776) #9 MTFMT (ENSNVIG00000017747) #10 SLC51B (ENSNVIG00000017732) #11 RASL12 (ENSNVIG00000017710) #12 KBTBD13 (ENSNVIG00000017694) #13 UBAP1L (ENSNVIG00000017675) #14 PDCD7 (ENSNVIG00000017665) #15 CLPX (ENSNVIG00000017631) #16 CILP (ENSNVIG00000017597) #17 PARP16 (ENSNVIG00000017580) #18 ENSNVIG00000017573 IGDCC3 (ENSNVIG00000017539) #19 IGDCC4 (ENSNVIG00000017489) #20 DPP8 (ENSNVIG00000017340) #21 HACD3 (ENSNVIG00000017259) #22 CO044 (ENSNVIG00000017199) #23 SLC24A1 (ENSNVIG00000017089) #24 DENND4A (ENSNVIG00000016862) #25 RAB11A (ENSNVIG00000016821) #26 MEGF11 (ENSNVIG00000016583) #27 DIS3L (ENSNVIG00000016535) #28 TIPIN (ENSNVIG00000016513) #29 MAP2K1 (ENSNVIG00000016498) #31 SNAPC5 (ENSNVIG00000016483) #32 RPL4 (ENSNVIG00000016412) #33 ZWILC (ENSNVIG00000016326) #34 LCTL (ENSNVIG00000016282) #35 SMAD6 (ENSNVIG00000016271) #36 SMAD3 (ENSNVIG00000016249) #37 AAGAB (ENSNVIG00000016212) Ursidae ANCESTRAL SPECIES 21 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B.p #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Ursus ANCESTRAL SPECIES 37 ENSGT00530000063561 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B.p #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Polar bear MODERN SPECIES 320 OAZ2 (ENSUMAG00000012619) RBPMS2 (ENSUMAG00000012614) PIF1 (ENSUMAG00000012605) PLEKHO2 (ENSUMAG00000012599) #7 SPG21 (ENSUMAG00000012587) #9 MTFMT (ENSUMAG00000012561) #10 SLC51B (ENSUMAG00000012546) #11 RASL12 (ENSUMAG00000012538) #12 ENSUMAG00000012533 #13 CLPX (ENSUMAG00000012513) #16 CILP (ENSUMAG00000012508) #17 PARP16 (ENSUMAG00000012504) #18 IGDCC3 (ENSUMAG00000012461) #19 ENSUMAG00000012451 #20 DPP8 (ENSUMAG00000012441) #21 HACD3 (ENSUMAG00000012379) #22 INTS14 (ENSUMAG00000012368) #23 SLC24A1 (ENSUMAG00000012325) #24 DENND4A (ENSUMAG00000012290) #25 RAB11A (ENSUMAG00000012273) #26 MEGF11 (ENSUMAG00000012242) #27 DIS3L (ENSUMAG00000012227) #28 TIPIN (ENSUMAG00000012215) #29 MAP2K1 (ENSUMAG00000012208) #31 RPL4 (ENSUMAG00000012178) #33 ZWILCH (ENSUMAG00000012145) #34 LCTL (ENSUMAG00000012072) #35 ENSUMAG00000012057 #37 AAGAB (ENSUMAG00000012048) IQCH (ENSUMAG00000012020) C15orf61 (ENSUMAG00000012016) American black bear MODERN SPECIES 4975 HACD3 (ENSUAMG00000019602) #22 INTS14 (ENSUAMG00000019601) #23 SLC24A1 (ENSUAMG00000019598) #24 ENSUAMG00000019405 #25 Giant Panda MODERN SPECIES 15 PLEKHO2 (ENSAMEG00000029578) #7 ANKDD1A (ENSAMEG00000002723) #8 SPG21 (ENSAMEG00000002738) #9 MTFMT (ENSAMEG00000002756) #10 ENSAMEG00000002772 #11 RASL12 (ENSAMEG00000029508) #12 KBTBD13 (ENSAMEG00000025813) #13 UBAP1L (ENSAMEG00000030738) #14 PDCD7 (ENSAMEG00000027984) #15 CLPX (ENSAMEG00000002810) #16 CILP (ENSAMEG00000002854) #17 PARP16 (ENSAMEG00000002861) #18 IGDCC3 (ENSAMEG00000002876) #19 IGDCC4 (ENSAMEG00000002889) #20 DPP8 (ENSAMEG00000002924) #21 HACD3 (ENSAMEG00000002983) #22 INTS14 (ENSAMEG00000003002) #23 SLC24A1 (ENSAMEG00000003029) #24 DENND4A (ENSAMEG00000003046) #25 RAB11A (ENSAMEG00000003119) #26 MEGF11 (ENSAMEG00000003131) #27 DIS3L (ENSAMEG00000003166) #28 TIPIN (ENSAMEG00000027725) #29 MAP2K1 (ENSAMEG00000003218) #31 SNAPC5 (ENSAMEG00000003249) #32 ENSAMEG00000029170 #33 ZWILCH (ENSAMEG00000003251) #34 LCTL (ENSAMEG00000003300) #35 SMAD6 (ENSAMEG00000029979) #36 SMAD3 (ENSAMEG00000003318) #37 AAGAB (ENSAMEG00000028433) Canidae ANCESTRAL SPECIES 15 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167.q #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00950000185603 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Canis_lupus ANCESTRAL SPECIES 17 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167.q #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145.lc.a #33 ENSGT00390000013696 #34 ENSGT00950000185603 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Dog MODERN SPECIES 23 PLEKHO2 (ENSCAFG00845023843) #7 ANKDD1A (ENSCAFG00845023984) #8 SPG21 (ENSCAFG00845024150) #9 MTFMT (ENSCAFG00845024367) #10 SLC51B (ENSCAFG00845024623) #11 KBTBD13 (ENSCAFG00845024657) #13 PDCD7 (ENSCAFG00845024725) #15 UBAP1L (ENSCAFG00845024876) #14 CLPX (ENSCAFG00845024932) #16 CILP (ENSCAFG00845025013) #17 AVPI1 (ENSCAFG00845025073) PARP16 (ENSCAFG00845025116) #18 IGDCC3 (ENSCAFG00845025254) #19 IGDCC4 (ENSCAFG00845025408) #20 DPP8 (ENSCAFG00845025611) #21 HACD3 (ENSCAFG00845025953) #22 INTS14 (ENSCAFG00845026081) #23 SLC24A1 (ENSCAFG00845026323) #24 DENND4A (ENSCAFG00845026536) #25 RAB11A (ENSCAFG00845027320) #26 ENSCAFG00845014976 #27 DIS3L (ENSCAFG00845015076) #28 TIPIN (ENSCAFG00845015229) #29 ENSCAFG00845015268 MAP2K1 (ENSCAFG00845015371) #31 SNAPC5 (ENSCAFG00845015512) #32 RPL4 (ENSCAFG00845015609) #33 ZWILCH (ENSCAFG00845015845) #34 ENSCAFG00845016122 LCTL (ENSCAFG00845016168) #35 SMAD6 (ENSCAFG00845016415) #36 Dingo MODERN SPECIES 205 ANKDD1A (ENSCAFG00020008860) #8 SPG21 (ENSCAFG00020008856) #9 MTFMT (ENSCAFG00020008826) #10 SLC51B (ENSCAFG00020008823) #11 ENSCAFG00020008821 #12 KBTBD13 (ENSCAFG00020008818) #13 UBAP1L (ENSCAFG00020008809) #14 PDCD7 (ENSCAFG00020008800) #15 CLPX (ENSCAFG00020008792) #16 CILP (ENSCAFG00020008785) #17 ENSCAFG00020008780 PARP16 (ENSCAFG00020008773) #18 IGDCC3 (ENSCAFG00020008743) #19 IGDCC4 (ENSCAFG00020008701) #20 DPP8 (ENSCAFG00020008685) #21 HACD3 (ENSCAFG00020008678) #22 INTS14 (ENSCAFG00020008669) #23 SLC24A1 (ENSCAFG00020008562) #24 DENND4A (ENSCAFG00020008501) #25 RAB11A (ENSCAFG00020008478) #26 MEGF11 (ENSCAFG00020008443) #27 DIS3L (ENSCAFG00020008413) #28 TIPIN (ENSCAFG00020008398) #29 MAP2K1 (ENSCAFG00020008392) #31 SNAPC5 (ENSCAFG00020008387) #32 ENSCAFG00020008355 #33 ZWILCH (ENSCAFG00020008215) #34 LCTL (ENSCAFG00020008195) #35 SMAD6 (ENSCAFG00020008193) #36 SMAD3 (ENSCAFG00020008177) #37 ENSCAFG00020008170 Red fox MODERN SPECIES ENSVVUG00000013805 PLEKHO2 (ENSVVUG00000013810) #7 ANKDD1A (ENSVVUG00000013820) #8 SPG21 (ENSVVUG00000013822) #9 MTFMT (ENSVVUG00000013827) #10 SLC51B (ENSVVUG00000013831) #11 RASL12 (ENSVVUG00000013838) #12 ENSVVUG00000013847 #13 PDCD7 (ENSVVUG00000013851) #15 CLPX (ENSVVUG00000013882) #16 CILP (ENSVVUG00000014204) #17 PARP16 (ENSVVUG00000014214) #18 IGDCC3 (ENSVVUG00000014224) #19 IGDCC4 (ENSVVUG00000014242) #20 DPP8 (ENSVVUG00000014284) #21 HACD3 (ENSVVUG00000014290) #22 INTS14 (ENSVVUG00000014296) #23 SLC24A1 (ENSVVUG00000014313) #24 DENND4A (ENSVVUG00000014392) #25 RAB11A (ENSVVUG00000014435) #26 MEGF11 (ENSVVUG00000014448) #27 DIS3L (ENSVVUG00000014492) #28 TIPIN (ENSVVUG00000014501) #29 MAP2K1 (ENSVVUG00000014514) #31 SNAPC5 (ENSVVUG00000014527) #32 ENSVVUG00000014531 #33 ZWILCH (ENSVVUG00000014559) #34 ENSVVUG00000014578 LCTL (ENSVVUG00000014585) #35 ENSVVUG00000014612 ENSVVUG00000014615 Felidae ANCESTRAL SPECIES 1 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00860000136046 ENSGT00940000153499.b.b #37 Panthera ANCESTRAL SPECIES 3 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00860000136046 ENSGT00940000153499.b.b #37 Panthera_a ANCESTRAL SPECIES 15 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00860000136046 ENSGT00940000153499.b.b #37 leopard MODERN SPECIES 7 ANKDD1A (ENSPPRG00000021337) #8 SPG21 (ENSPPRG00000024485) #9 MTFMT (ENSPPRG00000024322) #10 SLC51B (ENSPPRG00000024145) #11 RASL12 (ENSPPRG00000024033) #12 KBTBD13 (ENSPPRG00000014815) #13 UBAP1L (ENSPPRG00000023664) #14 PDCD7 (ENSPPRG00000023540) #15 CLPX (ENSPPRG00000023475) #16 CILP (ENSPPRG00000023132) #17 PARP16 (ENSPPRG00000022890) #18 IGDCC3 (ENSPPRG00000022706) #19 IGDCC4 (ENSPPRG00000000219) #20 DPP8 (ENSPPRG00000001353) #21 ENSPPRG00000001945 HACD3 (ENSPPRG00000003107) #22 INTS14 (ENSPPRG00000003935) #23 SLC24A1 (ENSPPRG00000006682) #24 DENND4A (ENSPPRG00000009637) #25 RAB11A (ENSPPRG00000010471) #26 MEGF11 (ENSPPRG00000014069) #27 DIS3L (ENSPPRG00000019912) #28 TIPIN (ENSPPRG00000022554) #29 MAP2K1 (ENSPPRG00000022608) #31 SNAPC5 (ENSPPRG00000000465) #32 ENSPPRG00000000610 #33 ZWILCH (ENSPPRG00000001390) #34 LCTL (ENSPPRG00000002315) #35 SMAD6 (ENSPPRG00000002502) #36 SMAD3 (ENSPPRG00000003306) #37 AAGAB (ENSPPRG00000003564) lion MODERN SPECIES 6 ANKDD1A (ENSPLOG00000011255) #8 SPG21 (ENSPLOG00000011106) #9 MTFMT (ENSPLOG00000011004) #10 SLC51B (ENSPLOG00000010972) #11 RASL12 (ENSPLOG00000010906) #12 KBTBD13 (ENSPLOG00000010867) #13 UBAP1L (ENSPLOG00000010817) #14 PDCD7 (ENSPLOG00000010782) #15 CLPX (ENSPLOG00000010665) #16 CILP (ENSPLOG00000010583) #17 PARP16 (ENSPLOG00000010532) #18 IGDCC3 (ENSPLOG00000010421) #19 IGDCC4 (ENSPLOG00000010305) #20 DPP8 (ENSPLOG00000010171) #21 ENSPLOG00000010122 HACD3 (ENSPLOG00000009943) #22 INTS14 (ENSPLOG00000009755) #23 SLC24A1 (ENSPLOG00000009464) #24 DENND4A (ENSPLOG00000008717) #25 RAB11A (ENSPLOG00000008488) #26 MEGF11 (ENSPLOG00000008100) #27 DIS3L (ENSPLOG00000007929) #28 TIPIN (ENSPLOG00000007894) #29 MAP2K1 (ENSPLOG00000007836) #31 SNAPC5 (ENSPLOG00000007792) #32 RPL4 (ENSPLOG00000007707) #33 ZWILCH (ENSPLOG00000007600) #34 LCTL (ENSPLOG00000007528) #35 SMAD6 (ENSPLOG00000007495) #36 ENSPLOG00000007093 SMAD3 (ENSPLOG00000007068) #37 Tiger MODERN SPECIES 204 PLEKHO2 (ENSPTIG00000020432) #7 ANKDD1A (ENSPTIG00000020864) #8 SPG21 (ENSPTIG00000021286) #9 MTFMT (ENSPTIG00000021473) #10 SLC51B (ENSPTIG00000021613) #11 RASL12 (ENSPTIG00000021753) #12 ENSPTIG00000005399 #13 UBAP1L (ENSPTIG00000021877) #14 CLPX (ENSPTIG00000022022) #16 CILP (ENSPTIG00000001633) #17 PARP16 (ENSPTIG00000004433) #18 IGDCC3 (ENSPTIG00000005842) #19 IGDCC4 (ENSPTIG00000006772) #20 DPP8 (ENSPTIG00000008731) #21 ENSPTIG00000012013 HACD3 (ENSPTIG00000012698) #22 INTS14 (ENSPTIG00000014987) #23 SLC24A1 (ENSPTIG00000017335) #24 DENND4A (ENSPTIG00000018874) #25 RAB11A (ENSPTIG00000021637) #26 MEGF11 (ENSPTIG00000001273) #27 DIS3L (ENSPTIG00000009042) #28 ENSPTIG00000009826 MAP2K1 (ENSPTIG00000010070) #31 SNAPC5 (ENSPTIG00000010493) #32 ENSPTIG00000010784 #33 ZWILCH (ENSPTIG00000011456) #34 LCTL (ENSPTIG00000012036) #35 SMAD3 (ENSPTIG00000012606) #37 AAGAB (ENSPTIG00000013747) IQCH (ENSPTIG00000014096) Cat MODERN SPECIES 237 PLEKHO2 (ENSFCAG00000040159) #7 ANKDD1A (ENSFCAG00000011452) #8 SPG21 (ENSFCAG00000011454) #9 MTFMT (ENSFCAG00000011455) #10 SLC51B (ENSFCAG00000026998) #11 RASL12 (ENSFCAG00000011458) #12 KBTBD13 (ENSFCAG00000030165) #13 UBAP1L (ENSFCAG00000044872) #14 PDCD7 (ENSFCAG00000040312) #15 CLPX (ENSFCAG00000026710) #16 CILP (ENSFCAG00000011462) #17 PARP16 (ENSFCAG00000011463) #18 IGDCC3 (ENSFCAG00000011465) #19 IGDCC4 (ENSFCAG00000011466) #20 DPP8 (ENSFCAG00000025415) #21 HACD3 (ENSFCAG00000008691) #22 INTS14 (ENSFCAG00000008692) #23 SLC24A1 (ENSFCAG00000008693) #24 DENND4A (ENSFCAG00000008694) #25 RAB11A (ENSFCAG00000030174) #26 MEGF11 (ENSFCAG00000003091) #27 DIS3L (ENSFCAG00000029869) #28 TIPIN (ENSFCAG00000035191) #29 MAP2K1 (ENSFCAG00000028389) #31 SNAPC5 (ENSFCAG00000012291) #32 RPL4 (ENSFCAG00000012293) #33 ZWILCH (ENSFCAG00000012294) #34 LCTL (ENSFCAG00000012298) #35 SMAD6 (ENSFCAG00000012300) #36 SMAD3 (ENSFCAG00000027081) #37 AAGAB (ENSFCAG00000004418) Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.db.a #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Chiroptera ANCESTRAL SPECIES 17 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.db.a #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Microchiroptera ANCESTRAL SPECIES 20 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.db.a #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00910000147041 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 Microbat DUPLICATION Microbat MODERN SPECIES 1052 SPG21 (ENSMLUG00000016404) #9 MTFMT (ENSMLUG00000016414) #10 SLC51B (ENSMLUG00000016432) #11 RASL12 (ENSMLUG00000016438) #12 KBTBD13 (ENSMLUG00000029350) #13 PDCD7 (ENSMLUG00000030414) #15 CLPX (ENSMLUG00000008769) #16 CILP (ENSMLUG00000008793) #17 ENSMLUG00000008817 #18 ENSMLUG00000008591 ENSMLUG00000028492 ENSMLUG00000028574 IGDCC3 (ENSMLUG00000000621) #19 IGDCC4 (ENSMLUG00000000632) #20 DPP8 (ENSMLUG00000009434) #21 ENSMLUG00000015087 #22 INTS14 (ENSMLUG00000015095) #23 SLC24A1 (ENSMLUG00000015104) #24 DENND4A (ENSMLUG00000015110) #25 ENSMLUG00000008820 #26 MEGF11 (ENSMLUG00000008226) #27 ENSMLUG00000022949 #28 MAP2K1 (ENSMLUG00000011790) #31 SNAPC5 (ENSMLUG00000011803) #32 ENSMLUG00000011809 #33 ZWILCH (ENSMLUG00000011819) #34 LCTL (ENSMLUG00000011849) #35 Microbat MODERN SPECIES 1257 TM9SF2 (ENSMLUG00000005464) UBAC2 (ENSMLUG00000001242) GPR183 (ENSMLUG00000001245) GPR18 (ENSMLUG00000017014) ENSMLUG00000029636 #22 ENSMLUG00000024254 DOCK9 (ENSMLUG00000014111) SLC15A1 (ENSMLUG00000000006) ENSMLUG00000023148 STK24 (ENSMLUG00000012880) FARP1 (ENSMLUG00000012869) Greater horseshoe bat MODERN SPECIES 24 PLEKHO2 (ENSRFEG00010008395) #7 ANKDD1A (ENSRFEG00010008103) #8 SPG21 (ENSRFEG00010007949) #9 MTFMT (ENSRFEG00010007904) #10 SLC51B (ENSRFEG00010007859) #11 RASL12 (ENSRFEG00010007809) #12 KBTBD13 (ENSRFEG00010007789) #13 UBAP1L (ENSRFEG00010007722) #14 PDCD7 (ENSRFEG00010007642) #15 CLPX (ENSRFEG00010007597) #16 CILP (ENSRFEG00010007498) #17 PARP16 (ENSRFEG00010007410) #18 IGDCC3 (ENSRFEG00010007254) #19 IGDCC4 (ENSRFEG00010007212) #20 DPP8 (ENSRFEG00010007043) #21 HACD3 (ENSRFEG00010004527) #22 INTS14 (ENSRFEG00010004454) #23 SLC24A1 (ENSRFEG00010004368) #24 DENND4A (ENSRFEG00010004242) #25 ENSRFEG00010004168 #26 MEGF11 (ENSRFEG00010004126) #27 DIS3L (ENSRFEG00010004058) #28 TIPIN (ENSRFEG00010004026) #29 MAP2K1 (ENSRFEG00010004010) #31 SNAPC5 (ENSRFEG00010003999) #32 ENSRFEG00010003980 #33 ZWILCH (ENSRFEG00010003952) #34 LCTL (ENSRFEG00010003917) #35 ENSRFEG00010003900 SMAD6 (ENSRFEG00010003887) #36 SMAD3 (ENSRFEG00010003872) #37 Megabat MODERN SPECIES 2040 CLPX (ENSPVAG00000004858) #16 CILP (ENSPVAG00000004867) #17 PARP16 (ENSPVAG00000004875) #18 IGDCC3 (ENSPVAG00000004879) #19 IGDCC4 (ENSPVAG00000004888) #20 DPP8 (ENSPVAG00000004890) #21 HACD3 (ENSPVAG00000004891) #22 INTS14 (ENSPVAG00000004892) #23 SLC24A1 (ENSPVAG00000004893) #24 DENND4A (ENSPVAG00000004894) #25 RAB11A (ENSPVAG00000004909) #26 MEGF11 (ENSPVAG00000004914) #27 DIS3L (ENSPVAG00000004927) #28 TIPIN (ENSPVAG00000004933) #29 Equus ANCESTRAL SPECIES 4 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.eb #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Horse MODERN SPECIES PLEKHO2 (ENSECAG00000022172) #7 ANKDD1A (ENSECAG00000017284) #8 SPG21 (ENSECAG00000012886) #9 MTFMT (ENSECAG00000012255) #10 SLC51B (ENSECAG00000012241) #11 RASL12 (ENSECAG00000009263) #12 KBTBD13 (ENSECAG00000003990) #13 UBAP1L (ENSECAG00000033711) #14 PDCD7 (ENSECAG00000026989) #15 CLPX (ENSECAG00000016127) #16 CILP (ENSECAG00000014515) #17 PARP16 (ENSECAG00000011251) #18 IGDCC3 (ENSECAG00000024763) #19 IGDCC4 (ENSECAG00000024668) #20 DPP8 (ENSECAG00000010846) #21 HACD3 (ENSECAG00000023082) #22 INTS14 (ENSECAG00000018884) #23 SLC24A1 (ENSECAG00000013327) #24 DENND4A (ENSECAG00000024306) #25 RAB11A (ENSECAG00000023865) #26 MEGF11 (ENSECAG00000000706) #27 DIS3L (ENSECAG00000007302) #28 TIPIN (ENSECAG00000004590) #29 MAP2K1 (ENSECAG00000010640) #31 RPL4 (ENSECAG00000023179) #33 ZWILCH (ENSECAG00000018367) #34 LCTL (ENSECAG00000014254) #35 SMAD6 (ENSECAG00000013706) #36 SMAD3 (ENSECAG00000020259) #37 ENSECAG00000047849 AAGAB (ENSECAG00000013142) Donkey MODERN SPECIES 11 PLEKHO2 (ENSEASG00005033707) #7 ANKDD1A (ENSEASG00005006509) #8 SPG21 (ENSEASG00005006508) #9 MTFMT (ENSEASG00005006503) #10 SLC51B (ENSEASG00005029917) #11 RASL12 (ENSEASG00005006494) #12 KBTBD13 (ENSEASG00005036296) #13 UBAP1L (ENSEASG00005006489) #14 PDCD7 (ENSEASG00005006486) #15 CLPX (ENSEASG00005006483) #16 CILP (ENSEASG00005006479) #17 PARP16 (ENSEASG00005030198) #18 IGDCC3 (ENSEASG00005006470) #19 IGDCC4 (ENSEASG00005006466) #20 DPP8 (ENSEASG00005006459) #21 HACD3 (ENSEASG00005006456) #22 INTS14 (ENSEASG00005006454) #23 SLC24A1 (ENSEASG00005006448) #24 DENND4A (ENSEASG00005006437) #25 RAB11A (ENSEASG00005006431) #26 MEGF11 (ENSEASG00005006429) #27 DIS3L (ENSEASG00005006407) #28 TIPIN (ENSEASG00005006396) #29 MAP2K1 (ENSEASG00005006387) #31 SNAPC5 (ENSEASG00005006384) #32 RPL4 (ENSEASG00005006373) #33 ZWILCH (ENSEASG00005006339) #34 LCTL (ENSEASG00005006319) #35 ENSEASG00005025450 #36 SMAD3 (ENSEASG00005006315) #37 AAGAB (ENSEASG00005006311) Atlantogenata ANCESTRAL SPECIES 2 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Xenarthra ANCESTRAL SPECIES 230 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 Armadillo MODERN SPECIES 984 IGDCC4 (ENSDNOG00000015741) #20 DPP8 (ENSDNOG00000001444) #21 HACD3 (ENSDNOG00000001687) #22 INTS14 (ENSDNOG00000001690) #23 SLC24A1 (ENSDNOG00000000816) #24 DENND4A (ENSDNOG00000019872) #25 ENSDNOG00000038479 #26 MEGF11 (ENSDNOG00000016951) #27 DIS3L (ENSDNOG00000016967) #28 TIPIN (ENSDNOG00000003177) #29 MAP2K1 (ENSDNOG00000016563) #31 ENSDNOG00000006689 #32 ENSDNOG00000006693 #33 ZWILCH (ENSDNOG00000006711) #34 LCTL (ENSDNOG00000006740) #35 SMAD6 (ENSDNOG00000008227) #36 Sloth MODERN SPECIES 6971 HACD3 (ENSCHOG00000009948) #22 INTS14 (ENSCHOG00000009962) #23 Afrotheria ANCESTRAL SPECIES 58 ENSGT00530000063561 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Tenrec MODERN SPECIES 6878 HACD3 (ENSETEG00000007887) #22 INTS14 (ENSETEG00000007891) #23 SLC24A1 (ENSETEG00000007893) #24 Afrotheria_a ANCESTRAL SPECIES 56 ENSGT00530000063561 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Elephant MODERN SPECIES 466 PIF1 (ENSLAFG00000023289) PLEKHO2 (ENSLAFG00000001775) #7 ANKDD1A (ENSLAFG00000002637) #8 SPG21 (ENSLAFG00000002639) #9 MTFMT (ENSLAFG00000006985) #10 SLC51B (ENSLAFG00000030011) #11 RASL12 (ENSLAFG00000006982) #12 KBTBD13 (ENSLAFG00000031048) #13 PDCD7 (ENSLAFG00000004977) #15 CLPX (ENSLAFG00000004978) #16 CILP (ENSLAFG00000005873) #17 PARP16 (ENSLAFG00000014938) #18 IGDCC3 (ENSLAFG00000000244) #19 IGDCC4 (ENSLAFG00000022955) #20 DPP8 (ENSLAFG00000013000) #21 HACD3 (ENSLAFG00000010226) #22 INTS14 (ENSLAFG00000010235) #23 DENND4A (ENSLAFG00000010247) #25 RAB11A (ENSLAFG00000011418) #26 MEGF11 (ENSLAFG00000011424) #27 DIS3L (ENSLAFG00000006866) #28 TIPIN (ENSLAFG00000026016) #29 MAP2K1 (ENSLAFG00000006487) #31 SNAPC5 (ENSLAFG00000006491) #32 RPL4 (ENSLAFG00000006494) #33 LCTL (ENSLAFG00000012306) #35 SMAD6 (ENSLAFG00000013285) #36 SMAD3 (ENSLAFG00000021903) #37 AAGAB (ENSLAFG00000022590) IQCH (ENSLAFG00000011381) C15orf61 (ENSLAFG00000000737) Hyrax MODERN SPECIES 5734 IGDCC3 (ENSPCAG00000003153) #19 ENSPCAG00000003257 #20 DPP8 (ENSPCAG00000003339) #21 HACD3 (ENSPCAG00000003430) #22 INTS14 (ENSPCAG00000003481) #23 Marsupialia ANCESTRAL SPECIES ENSGT00390000007209.l ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Marsupialia_b ANCESTRAL SPECIES ENSGT00390000007209.l ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Diprotodontia ANCESTRAL SPECIES ENSGT00390000007209.l ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Diprotodontia_a ANCESTRAL SPECIES 1 ENSGT00390000007209.l ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017828 #10 ENSGT00390000010409 #11 ENSGT00940000160167 #12 ENSGT00940000161629 #13 ENSGT00390000008092.b #14 ENSGT00390000017392 #15 ENSGT00390000017625 #16 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 koala MODERN SPECIES PIF1 (ENSPCIG00000029446) PLEKHO2 (ENSPCIG00000029445) #7 ENSPCIG00000029444 ANKDD1A (ENSPCIG00000032384) #8 SPG21 (ENSPCIG00000024124) #9 MTFMT (ENSPCIG00000024121) #10 ENSPCIG00000024118 #11 RASL12 (ENSPCIG00000035910) #12 UBAP1L (ENSPCIG00000024116) #14 PDCD7 (ENSPCIG00000024115) #15 CLPX (ENSPCIG00000024113) #16 CILP (ENSPCIG00000024111) #17 PARP16 (ENSPCIG00000024110) #18 IGDCC4 (ENSPCIG00000024106) #20 DPP8 (ENSPCIG00000024105) #21 HACD3 (ENSPCIG00000008851) #22 INTS14 (ENSPCIG00000008852) #23 ENSPCIG00000008854 #24 DENND4A (ENSPCIG00000006919) #25 RAB11A (ENSPCIG00000006878) #26 MEGF11 (ENSPCIG00000006843) #27 DIS3L (ENSPCIG00000006827) #28 TIPIN (ENSPCIG00000006818) #29 MAP2K1 (ENSPCIG00000006816) #31 ENSPCIG00000006812 #32 RPL4 (ENSPCIG00000006799) #33 ZWILCH (ENSPCIG00000006798) #34 LCTL (ENSPCIG00000006796) #35 SMAD6 (ENSPCIG00000006792) #36 SMAD3 (ENSPCIG00000014066) #37 AAGAB (ENSPCIG00000014065) Common wonbat MODERN SPECIES 581 PLEKHO2 (ENSVURG00010016489) #7 ENSVURG00010016494 ANKDD1A (ENSVURG00010016514) #8 SPG21 (ENSVURG00010016616) #9 MTFMT (ENSVURG00010016671) #10 RASL12 (ENSVURG00010016692) #12 KBTBD13 (ENSVURG00010016711) #13 UBAP1L (ENSVURG00010016718) #14 PDCD7 (ENSVURG00010016727) #15 CLPX (ENSVURG00010016746) #16 CILP (ENSVURG00010016754) #17 PARP16 (ENSVURG00010016773) #18 IGDCC3 (ENSVURG00010016786) #19 IGDCC4 (ENSVURG00010016817) #20 DPP8 (ENSVURG00010016847) #21 HACD3 (ENSVURG00010016877) #22 INTS14 (ENSVURG00010016912) #23 ENSVURG00010017031 #24 DENND4A (ENSVURG00010017069) #25 RAB11A (ENSVURG00010017156) #26 MEGF11 (ENSVURG00010017205) #27 DIS3L (ENSVURG00010017304) #28 TIPIN (ENSVURG00010017324) #29 MAP2K1 (ENSVURG00010017352) #31 SNAPC5 (ENSVURG00010017361) #32 RPL4 (ENSVURG00010017371) #33 ZWILCH (ENSVURG00010017403) #34 LCTL (ENSVURG00010017479) #35 SMAD6 (ENSVURG00010017499) #36 SMAD3 (ENSVURG00010017513) #37 AAGAB (ENSVURG00010017532) Wallaby MODERN SPECIES 4582 ENSMEUG00000012201 #22 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000009145 ANKDD1A (ENSSHAG00000009607) #8 MTFMT (ENSSHAG00000012265) #10 SPG21 (ENSSHAG00000009982) #9 ENSSHAG00000010231 #11 RASL12 (ENSSHAG00000010405) #12 KBTBD13 (ENSSHAG00000031944) #13 UBAP1L (ENSSHAG00000024296) #14 PDCD7 (ENSSHAG00000021601) #15 CLPX (ENSSHAG00000021063) #16 CILP (ENSSHAG00000011619) #17 PARP16 (ENSSHAG00000028933) #18 IGDCC3 (ENSSHAG00000012266) #19 IGDCC4 (ENSSHAG00000012686) #20 DPP8 (ENSSHAG00000012989) #21 HACD3 (ENSSHAG00000013349) #22 INTS14 (ENSSHAG00000013462) #23 SLC24A1 (ENSSHAG00000013623) #24 DENND4A (ENSSHAG00000002367) #25 RAB11A (ENSSHAG00000006622) #26 MEGF11 (ENSSHAG00000006869) #27 DIS3L (ENSSHAG00000010970) #28 TIPIN (ENSSHAG00000011237) #29 MAP2K1 (ENSSHAG00000029460) #31 SNAPC5 (ENSSHAG00000025154) #32 RPL4 (ENSSHAG00000002421) #33 ZWILCH (ENSSHAG00000002622) #34 LCTL (ENSSHAG00000003461) #35 SMAD6 (ENSSHAG00000007962) #36 SMAD3 (ENSSHAG00000023904) #37 AAGAB (ENSSHAG00000012729) Opossum MODERN SPECIES ENSMODG00000010455 ANKDD1A (ENSMODG00000010452) #8 SPG21 (ENSMODG00000010438) #9 MTFMT (ENSMODG00000010418) #10 ENSMODG00000048415 #11 RASL12 (ENSMODG00000038689) #12 UBAP1L (ENSMODG00000029751) #14 PDCD7 (ENSMODG00000010358) #15 CLPX (ENSMODG00000010348) #16 ENSMODG00000029783 CILP (ENSMODG00000010296) #17 PARP16 (ENSMODG00000041084) #18 IGDCC3 (ENSMODG00000010271) #19 IGDCC4 (ENSMODG00000010244) #20 DPP8 (ENSMODG00000010208) #21 HACD3 (ENSMODG00000009893) #22 INTS14 (ENSMODG00000009876) #23 SLC24A1 (ENSMODG00000009861) #24 DENND4A (ENSMODG00000009838) #25 RAB11A (ENSMODG00000009810) #26 MEGF11 (ENSMODG00000009795) #27 DIS3L (ENSMODG00000009760) #28 TIPIN (ENSMODG00000009724) #29 ENSMODG00000039883 MAP2K1 (ENSMODG00000009715) #31 ENSMODG00000025470 #32 RPL4 (ENSMODG00000009657) #33 ZWILCH (ENSMODG00000009648) #34 LCTL (ENSMODG00000009632) #35 SMAD6 (ENSMODG00000009620) #36 SMAD3 (ENSMODG00000038564) #37 Platypus MODERN SPECIES 16 ENSOANG00000046297 ENSOANG00000042846 TNFAIP8L3 (ENSOANG00000005399) ENSOANG00000047689 #7 SPG21 (ENSOANG00000038130) #9 CLPX (ENSOANG00000009957) #16 PDCD7 (ENSOANG00000039127) #15 KBTBD13 (ENSOANG00000037536) #13 RASL12 (ENSOANG00000047854) #12 MTFMT (ENSOANG00000036007) #10 CILP (ENSOANG00000002696) #17 PARP16 (ENSOANG00000008180) #18 IGDCC3 (ENSOANG00000012253) #19 IGDCC4 (ENSOANG00000011112) #20 DPP8 (ENSOANG00000008346) #21 ENSOANG00000046972 #22 INTS14 (ENSOANG00000001669) #23 ENSOANG00000043682 #24 DENND4A (ENSOANG00000044994) #25 RAB11A (ENSOANG00000038794) #26 MEGF11 (ENSOANG00000037204) #27 DIS3L (ENSOANG00000009753) #28 TIPIN (ENSOANG00000048848) #29 MAP2K1 (ENSOANG00000009750) #31 SNAPC5 (ENSOANG00000039654) #32 RPL4 (ENSOANG00000048650) #33 ZWILCH (ENSOANG00000004555) #34 LCTL (ENSOANG00000004554) #35 SMAD6 (ENSOANG00000042174) #36 SMAD3 (ENSOANG00000037003) #37 AAGAB (ENSOANG00000046695) Sauria ANCESTRAL SPECIES 10 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00510000052431 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00950000182960.b ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Lepidosauria ANCESTRAL SPECIES 19 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00950000182960.b ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00950000186456 Episquamata ANCESTRAL SPECIES 9 ENSGT00950000182940.b.a.a ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00950000186456 ENSGT00390000008908 Laterata ANCESTRAL SPECIES 16 ENSGT00950000182940.b.a.a ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Common wall lizard MODERN SPECIES 5 SPG21 (ENSPMRG00000013948) #9 CLPX (ENSPMRG00000013971) #16 PDCD7 (ENSPMRG00000013985) #15 UBAP1L (ENSPMRG00000013988) #14 KBTBD13 (ENSPMRG00000013998) #13 RASL12 (ENSPMRG00000014003) #12 MTFMT (ENSPMRG00000014009) #10 CILP (ENSPMRG00000014021) #17 GNRHR (ENSPMRG00000014032) PARP16 (ENSPMRG00000014048) #18 IGDCC3 (ENSPMRG00000014065) #19 IGDCC4 (ENSPMRG00000014090) #20 DPP8 (ENSPMRG00000014125) #21 ENSPMRG00000014139 ENSPMRG00000014144 HACD3 (ENSPMRG00000014152) #22 INTS14 (ENSPMRG00000014159) #23 DENND4A (ENSPMRG00000014169) #25 RAB11A (ENSPMRG00000014183) #26 MEGF11 (ENSPMRG00000014263) #27 ENSPMRG00000014534 ENSPMRG00000014537 DIS3L (ENSPMRG00000014540) #28 TIPIN (ENSPMRG00000014546) #29 MAP2K1 (ENSPMRG00000014555) #31 SNAPC5 (ENSPMRG00000014563) #32 RPL4 (ENSPMRG00000014570) #33 ZWILCH (ENSPMRG00000014603) #34 SMAD6 (ENSPMRG00000014612) #36 ENSPMRG00000014621 #37 AAGAB (ENSPMRG00000014629) Argentine black and white tegu MODERN SPECIES 46 SV2B (ENSSMRG00000021607) ANKDD1A (ENSSMRG00000021606) #8 SPG21 (ENSSMRG00000021605) #9 CLPX (ENSSMRG00000021604) #16 PDCD7 (ENSSMRG00000021603) #15 UBAP1L (ENSSMRG00000021602) #14 KBTBD13 (ENSSMRG00000021601) #13 RASL12 (ENSSMRG00000021600) #12 MTFMT (ENSSMRG00000021598) #10 CILP (ENSSMRG00000021597) #17 ENSSMRG00000021596 PARP16 (ENSSMRG00000021595) #18 IGDCC3 (ENSSMRG00000021594) #19 IGDCC4 (ENSSMRG00000021593) #20 DPP8 (ENSSMRG00000021592) #21 HACD3 (ENSSMRG00000021591) #22 INTS14 (ENSSMRG00000021590) #23 DENND4A (ENSSMRG00000021589) #25 RAB11A (ENSSMRG00000021588) #26 MEGF11 (ENSSMRG00000021585) #27 DIS3L (ENSSMRG00000021584) #28 TIPIN (ENSSMRG00000021582) #29 MAP2K1 (ENSSMRG00000021581) #31 SNAPC5 (ENSSMRG00000021580) #32 RPL4 (ENSSMRG00000021574) #33 ZWILCH (ENSSMRG00000021573) #34 SMAD6 (ENSSMRG00000021572) #36 SMAD3 (ENSSMRG00000021571) #37 AAGAB (ENSSMRG00000021570) IQCH (ENSSMRG00000021569) C15orf61 (ENSSMRG00000021568) Toxicofera ANCESTRAL SPECIES 40 ENSGT00950000182940.b.a.a ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00950000186456 ENSGT00390000008908 Elapidae ANCESTRAL SPECIES 12 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000156291 ENSGT00940000157540.A ENSGT00940000160523 ENSGT00510000048902.b ENSGT00940000156682 ENSGT00940000159268.d ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b.d #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00950000186456 ENSGT00390000008908 Elapidae_a ANCESTRAL SPECIES 37 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000156291 ENSGT00940000157540.A ENSGT00940000160523 ENSGT00940000156682 ENSGT00940000159268.d ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B.m #25 ENSGT00940000155836.B.n #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b.d #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Acanthophiinae ANCESTRAL SPECIES 37 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000156291 ENSGT00940000157540.A ENSGT00940000160523 ENSGT00940000156682 ENSGT00940000159268.d ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B.m #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b.d #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 Mainland tiger snake MODERN SPECIES 49 SPG21 (ENSNSUG00000002842) #9 CLPX (ENSNSUG00000002848) #16 PDCD7 (ENSNSUG00000002856) #15 KBTBD13 (ENSNSUG00000002870) #13 RASL12 (ENSNSUG00000002872) #12 CILP (ENSNSUG00000002889) #17 PARP16 (ENSNSUG00000002898) #18 IGDCC3 (ENSNSUG00000002912) #19 IGDCC4 (ENSNSUG00000002913) #20 MCTP2 (ENSNSUG00000002916) NR2F2 (ENSNSUG00000002923) ARRDC4 (ENSNSUG00000002927) IGF1R (ENSNSUG00000002935) SYNM (ENSNSUG00000002939) DPP8 (ENSNSUG00000002945) #21 HACD3 (ENSNSUG00000003778) #22 INTS14 (ENSNSUG00000003780) #23 ENSNSUG00000003906 #25 RAB11A (ENSNSUG00000003908) #26 MEGF11 (ENSNSUG00000003910) #27 ENSNSUG00000003922 #28 TIPIN (ENSNSUG00000003924) #29 MAP2K1 (ENSNSUG00000003931) #31 SNAPC5 (ENSNSUG00000003966) #32 ENSNSUG00000003967 #33 ZWILCH (ENSNSUG00000003975) #34 SMAD3 (ENSNSUG00000003978) #37 AAGAB (ENSNSUG00000003997) C15orf61 (ENSNSUG00000004019) MAP2K5 (ENSNSUG00000004022) Eastern brown snake MODERN SPECIES 43 PDCD7 (ENSPTXG00000015762) #15 UBAP1L (ENSPTXG00000015759) #14 KBTBD13 (ENSPTXG00000015758) #13 RASL12 (ENSPTXG00000015757) #12 MTFMT (ENSPTXG00000015656) #10 CILP (ENSPTXG00000015654) #17 PARP16 (ENSPTXG00000015653) #18 IGDCC3 (ENSPTXG00000015652) #19 IGDCC4 (ENSPTXG00000015649) #20 MCTP2 (ENSPTXG00000015590) NR2F2 (ENSPTXG00000015588) ARRDC4 (ENSPTXG00000015586) IGF1R (ENSPTXG00000015585) SYNM (ENSPTXG00000015583) DPP8 (ENSPTXG00000015569) #21 HACD3 (ENSPTXG00000015568) #22 INTS14 (ENSPTXG00000015567) #23 DENND4A (ENSPTXG00000015565) #25 RAB11A (ENSPTXG00000015564) #26 MEGF11 (ENSPTXG00000015560) #27 DIS3L (ENSPTXG00000015557) #28 TIPIN (ENSPTXG00000015555) #29 MAP2K1 (ENSPTXG00000015554) #31 SNAPC5 (ENSPTXG00000015552) #32 RPL4 (ENSPTXG00000015545) #33 SMAD6 (ENSPTXG00000015543) #36 SMAD3 (ENSPTXG00000015540) #37 AAGAB (ENSPTXG00000015539) IQCH (ENSPTXG00000015536) C15orf61 (ENSPTXG00000015534) MAP2K5 (ENSPTXG00000015531) Blue-lipped sea krait MODERN SPECIES 7781 HACD3 (ENSLLTG00000016593) #22 INTS14 (ENSLLTG00000016595) #23 ENSLLTG00000016601 #25 Indian cobra MODERN SPECIES 14 RASL12 (ENSNNAG00000003818) #12 MTFMT (ENSNNAG00000003854) #10 CILP (ENSNNAG00000004153) #17 PARP16 (ENSNNAG00000004225) #18 IGDCC3 (ENSNNAG00000004271) #19 IGDCC4 (ENSNNAG00000004504) #20 MCTP2 (ENSNNAG00000004568) NR2F2 (ENSNNAG00000004668) ENSNNAG00000004739 ENSNNAG00000004760 ARRDC4 (ENSNNAG00000004766) ENSNNAG00000004785 IGF1R (ENSNNAG00000004949) SYNM (ENSNNAG00000007433) DPP8 (ENSNNAG00000007591) #21 HACD3 (ENSNNAG00000009979) #22 INTS14 (ENSNNAG00000010021) #23 DENND4A (ENSNNAG00000010330) #25 RAB11A (ENSNNAG00000010435) #26 MEGF11 (ENSNNAG00000010468) #27 DIS3L (ENSNNAG00000010799) #28 TIPIN (ENSNNAG00000010924) #29 MAP2K1 (ENSNNAG00000010963) #31 SNAPC5 (ENSNNAG00000011012) #32 RPL4 (ENSNNAG00000011026) #33 ZWILCH (ENSNNAG00000011099) #34 SMAD6 (ENSNNAG00000011230) #36 SMAD3 (ENSNNAG00000011272) #37 AAGAB (ENSNNAG00000011287) ENSNNAG00000011356 IQCH (ENSNNAG00000011412) Lizard MODERN SPECIES 1115 ENSACAG00000041474 ENSACAG00000043295 #19 IGDCC4 (ENSACAG00000004850) #20 DPP8 (ENSACAG00000004752) #21 HACD3 (ENSACAG00000004719) #22 INTS14 (ENSACAG00000004673) #23 DENND4A (ENSACAG00000004531) #25 ENSACAG00000034809 ENSACAG00000041175 ENSACAG00000045369 RAB11A (ENSACAG00000004479) #26 MEGF11 (ENSACAG00000004442) #27 tuatara MODERN SPECIES 1605 PCSK6 (ENSSPUG00000010521) PLEKHO2 (ENSSPUG00000010218) #7 ANKDD1A (ENSSPUG00000010169) #8 SPG21 (ENSSPUG00000010154) #9 CLPX (ENSSPUG00000010113) #16 PDCD7 (ENSSPUG00000010062) #15 UBAP1L (ENSSPUG00000010040) #14 RASL12 (ENSSPUG00000009991) #12 ENSSPUG00000009869 #10 GNRHR (ENSSPUG00000009801) PARP16 (ENSSPUG00000009787) #18 ENSSPUG00000009766 IGDCC3 (ENSSPUG00000009723) #19 IGDCC4 (ENSSPUG00000009684) #20 DPP8 (ENSSPUG00000009654) #21 HACD3 (ENSSPUG00000009636) #22 INTS14 (ENSSPUG00000009616) #23 Archelosauria ANCESTRAL SPECIES 13 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00510000052431 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00950000182960.b.f ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Archosauria ANCESTRAL SPECIES 9 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00950000182960.b.f ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Aves ANCESTRAL SPECIES 14 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Neognathae ANCESTRAL SPECIES 11 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Galloanserae ANCESTRAL SPECIES 10 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Anatidae ANCESTRAL SPECIES 36 ENSGT00940000159506 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Pink-footed goose MODERN SPECIES 52 ANKDD1A (ENSABRG00000009479) #8 SPG21 (ENSABRG00000009446) #9 CLPX (ENSABRG00000009416) #16 ENSABRG00000009376 UBAP1L (ENSABRG00000009337) #14 KBTBD13 (ENSABRG00000009312) #13 RASL12 (ENSABRG00000009304) #12 MTFMT (ENSABRG00000009286) #10 CILP (ENSABRG00000009276) #17 GNRHR (ENSABRG00000009256) PARP16 (ENSABRG00000009242) #18 IGDCC3 (ENSABRG00000009234) #19 IGDCC4 (ENSABRG00000009006) #20 DPP8 (ENSABRG00000008939) #21 ENSABRG00000008924 HACD3 (ENSABRG00000008901) #22 INTS14 (ENSABRG00000008861) #23 SLC24A1 (ENSABRG00000008827) #24 DENND4A (ENSABRG00000008768) #25 RAB11A (ENSABRG00000008748) #26 MEGF11 (ENSABRG00000008723) #27 DIS3L (ENSABRG00000008682) #28 TIPIN (ENSABRG00000008669) #29 ENSABRG00000008668 MAP2K1 (ENSABRG00000008635) #31 SNAPC5 (ENSABRG00000008617) #32 RPL4 (ENSABRG00000008586) #33 ZWILCH (ENSABRG00000008567) #34 LCTL (ENSABRG00000008534) #35 SMAD6 (ENSABRG00000008516) #36 SMAD3 (ENSABRG00000008486) #37 Duck MODERN SPECIES 2 PLEKHO2 (ENSAPLG00000027780) #7 ANKDD1A (ENSAPLG00000014397) #8 SPG21 (ENSAPLG00000014668) #9 CLPX (ENSAPLG00000014863) #16 UBAP1L (ENSAPLG00000023567) #14 KBTBD13 (ENSAPLG00000015571) #13 RASL12 (ENSAPLG00000015628) #12 PARP16 (ENSAPLG00000015958) #18 ENSAPLG00000022299 MTFMT (ENSAPLG00000015719) #10 CILP (ENSAPLG00000026330) #17 GNRHR (ENSAPLG00000024770) IGDCC3 (ENSAPLG00000016111) #19 IGDCC4 (ENSAPLG00000013127) #20 DPP8 (ENSAPLG00000013345) #21 HACD3 (ENSAPLG00000013863) #22 INTS14 (ENSAPLG00000014064) #23 SLC24A1 (ENSAPLG00000014168) #24 DENND4A (ENSAPLG00000014243) #25 RAB11A (ENSAPLG00000014962) #26 MEGF11 (ENSAPLG00000015095) #27 DIS3L (ENSAPLG00000015294) #28 TIPIN (ENSAPLG00000015332) #29 MAP2K1 (ENSAPLG00000015480) #31 SNAPC5 (ENSAPLG00000001863) #32 RPL4 (ENSAPLG00000015853) #33 ZWILCH (ENSAPLG00000000968) #34 ENSAPLG00000028241 #35 SMAD6 (ENSAPLG00000000997) #36 SMAD3 (ENSAPLG00000007006) #37 AAGAB (ENSAPLG00000007346) Phasianidae ANCESTRAL SPECIES 11 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Japanese quail MODERN SPECIES 1 PCSK6 (ENSCJPG00005020709) PLEKHO2 (ENSCJPG00005020725) #7 SPG21 (ENSCJPG00005020726) #9 CLPX (ENSCJPG00005020729) #16 PDCD7 (ENSCJPG00005020752) #15 UBAP1L (ENSCJPG00005020753) #14 KBTBD13 (ENSCJPG00005020754) #13 RASL12 (ENSCJPG00005020755) #12 MTFMT (ENSCJPG00005020757) #10 CILP (ENSCJPG00005020758) #17 ENSCJPG00005020760 PARP16 (ENSCJPG00005020761) #18 IGDCC3 (ENSCJPG00005020762) #19 IGDCC4 (ENSCJPG00005020763) #20 DPP8 (ENSCJPG00005020764) #21 HACD3 (ENSCJPG00005020802) #22 INTS14 (ENSCJPG00005020803) #23 SLC24A1 (ENSCJPG00005020804) #24 DENND4A (ENSCJPG00005020807) #25 RAB11A (ENSCJPG00005020908) #26 MEGF11 (ENSCJPG00005020910) #27 DIS3L (ENSCJPG00005020941) #28 TIPIN (ENSCJPG00005020942) #29 MAP2K1 (ENSCJPG00005020944) #31 SNAPC5 (ENSCJPG00005020958) #32 RPL4 (ENSCJPG00005020961) #33 ZWILCH (ENSCJPG00005020968) #34 SMAD6 (ENSCJPG00005020969) #36 SMAD3 (ENSCJPG00005020970) #37 AAGAB (ENSCJPG00005020971) IQCH (ENSCJPG00005020972) Phasianidae_b ANCESTRAL SPECIES 11 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Chicken MODERN SPECIES 1 PLEKHO2 (ENSGALG00010019123) #7 ANKDD1A (ENSGALG00010019185) #8 SPG21 (ENSGALG00010019230) #9 CLPX (ENSGALG00010017577) #16 PDCD7 (ENSGALG00010017616) #15 UBAP1L (ENSGALG00010017620) #14 KBTBD13 (ENSGALG00010017654) #13 RASL12 (ENSGALG00010017679) #12 MTFMT (ENSGALG00010017693) #10 CILP (ENSGALG00010017715) #17 GNRHR (ENSGALG00010017753) PARP16 (ENSGALG00010017761) #18 IGDCC3 (ENSGALG00010017764) #19 IGDCC4 (ENSGALG00010017782) #20 DPP8 (ENSGALG00010017805) #21 HACD3 (ENSGALG00010017811) #22 VWA9 (ENSGALG00010017815) #23 SLC24A1 (ENSGALG00010017819) #24 DENND4A (ENSGALG00010017830) #25 RAB11A (ENSGALG00010017870) #26 MEGF11 (ENSGALG00010017904) #27 DIS3L (ENSGALG00010017941) #28 TIPIN (ENSGALG00010017956) #29 MAP2K1 (ENSGALG00010018000) #31 SNAPC5 (ENSGALG00010018020) #32 RPL4 (ENSGALG00010018036) #33 ZWILCH (ENSGALG00010018042) #34 SMAD6 (ENSGALG00010018054) #36 SMAD3 (ENSGALG00010018099) #37 AAGAB (ENSGALG00010018150) IQCH (ENSGALG00010018192) Turkey MODERN SPECIES 3 SNRPA1 (ENSMGAG00000009427) PCSK6 (ENSMGAG00000009429) ENSMGAG00000009470 #7 ENSMGAG00000009485 #9 CLPX (ENSMGAG00000009513) #16 UBAP1L (ENSMGAG00000017613) #14 KBTBD13 (ENSMGAG00000009546) #13 RASL12 (ENSMGAG00000009547) #12 MTFMT (ENSMGAG00000009584) #10 CILP (ENSMGAG00000009589) #17 ENSMGAG00000009590 PARP16 (ENSMGAG00000009579) #18 IGDCC3 (ENSMGAG00000009604) #19 IGDCC4 (ENSMGAG00000009630) #20 DPP8 (ENSMGAG00000009649) #21 HACD3 (ENSMGAG00000009683) #22 INTS14 (ENSMGAG00000009693) #23 SLC24A1 (ENSMGAG00000009715) #24 DENND4A (ENSMGAG00000009728) #25 RAB11A (ENSMGAG00000009797) #26 MEGF11 (ENSMGAG00000009776) #27 DIS3L (ENSMGAG00000009805) #28 TIPIN (ENSMGAG00000009857) #29 MAP2K1 (ENSMGAG00000009864) #31 ENSMGAG00000019153 RPL4 (ENSMGAG00000009822) #33 ZWILCH (ENSMGAG00000009851) #34 SMAD6 (ENSMGAG00000009875) #36 SMAD3 (ENSMGAG00000009879) #37 AAGAB (ENSMGAG00000009906) IQCH (ENSMGAG00000009928) Neognathae_b ANCESTRAL SPECIES 13 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Passeriformes ANCESTRAL SPECIES 12 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Great tit MODERN SPECIES 1 PLEKHO2 (ENSPMJG00000009784) #7 ANKDD1A (ENSPMJG00000009785) #8 SPG21 (ENSPMJG00000009786) #9 CLPX (ENSPMJG00000009789) #16 PDCD7 (ENSPMJG00000009809) #15 UBAP1L (ENSPMJG00000009813) #14 KBTBD13 (ENSPMJG00000009814) #13 RASL12 (ENSPMJG00000009816) #12 MTFMT (ENSPMJG00000009817) #10 CILP (ENSPMJG00000009819) #17 ENSPMJG00000009825 PARP16 (ENSPMJG00000009828) #18 IGDCC3 (ENSPMJG00000009863) #19 IGDCC4 (ENSPMJG00000009904) #20 DPP8 (ENSPMJG00000009912) #21 HACD3 (ENSPMJG00000009915) #22 INTS14 (ENSPMJG00000009916) #23 SLC24A1 (ENSPMJG00000009917) #24 DENND4A (ENSPMJG00000009918) #25 RAB11A (ENSPMJG00000009921) #26 MEGF11 (ENSPMJG00000009924) #27 DIS3L (ENSPMJG00000009931) #28 TIPIN (ENSPMJG00000009939) #29 MAP2K1 (ENSPMJG00000009964) #31 SNAPC5 (ENSPMJG00000009967) #32 RPL4 (ENSPMJG00000009971) #33 ZWILCH (ENSPMJG00000009977) #34 LCTL (ENSPMJG00000009979) #35 SMAD6 (ENSPMJG00000009983) #36 SMAD3 (ENSPMJG00000009991) #37 AAGAB (ENSPMJG00000009992) Passeriformes_d ANCESTRAL SPECIES 12 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Flycatcher MODERN SPECIES 1 PLEKHO2 (ENSFALG00000027240) #7 ENSFALG00000010172 #8 SPG21 (ENSFALG00000023877) #9 CLPX (ENSFALG00000010151) #16 PDCD7 (ENSFALG00000010138) #15 UBAP1L (ENSFALG00000010134) #14 KBTBD13 (ENSFALG00000015316) #13 RASL12 (ENSFALG00000010132) #12 MTFMT (ENSFALG00000010118) #10 CILP (ENSFALG00000010116) #17 ENSFALG00000010114 PARP16 (ENSFALG00000010108) #18 IGDCC3 (ENSFALG00000010105) #19 IGDCC4 (ENSFALG00000010102) #20 DPP8 (ENSFALG00000010098) #21 HACD3 (ENSFALG00000010085) #22 INTS14 (ENSFALG00000010068) #23 SLC24A1 (ENSFALG00000010063) #24 DENND4A (ENSFALG00000010056) #25 RAB11A (ENSFALG00000010052) #26 MEGF11 (ENSFALG00000010040) #27 DIS3L (ENSFALG00000010033) #28 TIPIN (ENSFALG00000010027) #29 MAP2K1 (ENSFALG00000028438) #31 SNAPC5 (ENSFALG00000025446) #32 ENSFALG00000028967 ENSFALG00000009988 ENSFALG00000009983 ENSFALG00000009980 ENSFALG00000009958 ENSFALG00000009937 Passeriformes_g ANCESTRAL SPECIES 13 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT01060000252718 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Passeroidea ANCESTRAL SPECIES 12 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT01060000252718 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Zebra finch MODERN SPECIES 1 PCSK6 (ENSTGUG00000008972) PLEKHO2 (ENSTGUG00000009006) #7 ANKDD1A (ENSTGUG00000009014) #8 SPG21 (ENSTGUG00000019593) #9 CLPX (ENSTGUG00000009033) #16 PDCD7 (ENSTGUG00000009069) #15 KBTBD13 (ENSTGUG00000020316) #13 RASL12 (ENSTGUG00000009081) #12 MTFMT (ENSTGUG00000009090) #10 CILP (ENSTGUG00000009096) #17 GNRHR (ENSTGUG00000020538) PARP16 (ENSTGUG00000009103) #18 IGDCC3 (ENSTGUG00000009117) #19 IGDCC4 (ENSTGUG00000009136) #20 DPP8 (ENSTGUG00000009145) #21 HACD3 (ENSTGUG00000009174) #22 INTS14 (ENSTGUG00000009182) #23 SLC24A1 (ENSTGUG00000009206) #24 DENND4A (ENSTGUG00000009220) #25 RAB11A (ENSTGUG00000009279) #26 MEGF11 (ENSTGUG00000009293) #27 DIS3L (ENSTGUG00000009315) #28 TIPIN (ENSTGUG00000009358) #29 ENSTGUG00000019914 MAP2K1 (ENSTGUG00000009363) #31 RPL4 (ENSTGUG00000009403) #33 ZWILCH (ENSTGUG00000009439) #34 LCTL (ENSTGUG00000009457) #35 SMAD6 (ENSTGUG00000009467) #36 SMAD3 (ENSTGUG00000009470) #37 AAGAB (ENSTGUG00000009497) Common canary MODERN SPECIES 12 PLEKHO2 (ENSSCAG00000010064) #7 ANKDD1A (ENSSCAG00000010071) #8 SPG21 (ENSSCAG00000010087) #9 CLPX (ENSSCAG00000010094) #16 PDCD7 (ENSSCAG00000010101) #15 UBAP1L (ENSSCAG00000010105) #14 KBTBD13 (ENSSCAG00000010108) #13 RASL12 (ENSSCAG00000010110) #12 MTFMT (ENSSCAG00000010115) #10 CILP (ENSSCAG00000010128) #17 GNRHR (ENSSCAG00000010133) PARP16 (ENSSCAG00000010143) #18 IGDCC3 (ENSSCAG00000010169) #19 IGDCC4 (ENSSCAG00000010185) #20 DPP8 (ENSSCAG00000010189) #21 HACD3 (ENSSCAG00000010199) #22 INTS14 (ENSSCAG00000010200) #23 SLC24A1 (ENSSCAG00000010206) #24 DENND4A (ENSSCAG00000010214) #25 RAB11A (ENSSCAG00000010226) #26 MEGF11 (ENSSCAG00000010255) #27 DIS3L (ENSSCAG00000010324) #28 TIPIN (ENSSCAG00000010328) #29 MAP2K1 (ENSSCAG00000010333) #31 ENSSCAG00000010341 RPL4 (ENSSCAG00000010344) #33 ZWILCH (ENSSCAG00000010364) #34 LCTL (ENSSCAG00000010374) #35 ENSSCAG00000010394 ENSSCAG00000010404 SMAD6 (ENSSCAG00000010407) #36 Medium ground finch MODERN SPECIES 69 PCSK6 (ENSGFOG00000009712) PLEKHO2 (ENSGFOG00000009993) #7 ANKDD1A (ENSGFOG00000009999) #8 SPG21 (ENSGFOG00000010013) #9 CLPX (ENSGFOG00000010023) #16 UBAP1L (ENSGFOG00000010035) #14 KBTBD13 (ENSGFOG00000010042) #13 RASL12 (ENSGFOG00000010043) #12 MTFMT (ENSGFOG00000010047) #10 CILP (ENSGFOG00000010056) #17 GNRHR (ENSGFOG00000010060) PARP16 (ENSGFOG00000010067) #18 IGDCC3 (ENSGFOG00000010086) #19 IGDCC4 (ENSGFOG00000010130) #20 DPP8 (ENSGFOG00000010227) #21 HACD3 (ENSGFOG00000010246) #22 INTS14 (ENSGFOG00000010255) #23 SLC24A1 (ENSGFOG00000010269) #24 DENND4A (ENSGFOG00000010346) #25 RAB11A (ENSGFOG00000011557) #26 MEGF11 (ENSGFOG00000011585) #27 DIS3L (ENSGFOG00000011782) #28 TIPIN (ENSGFOG00000011794) #29 MAP2K1 (ENSGFOG00000011801) #31 ENSGFOG00000011806 RPL4 (ENSGFOG00000011811) #33 ZWILCH (ENSGFOG00000011836) #34 LCTL (ENSGFOG00000011846) #35 SMAD6 (ENSGFOG00000011856) #36 SMAD3 (ENSGFOG00000011865) #37 ENSGFOG00000011872 Neognathae_c ANCESTRAL SPECIES 15 ENSGT00530000063760.a #7 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Kakapo MODERN SPECIES 1 ANKDD1A (ENSSHBG00005015083) #8 SPG21 (ENSSHBG00005015042) #9 CLPX (ENSSHBG00005015027) #16 PDCD7 (ENSSHBG00005015010) #15 UBAP1L (ENSSHBG00005014999) #14 KBTBD13 (ENSSHBG00005014990) #13 RASL12 (ENSSHBG00005014984) #12 MTFMT (ENSSHBG00005014974) #10 CILP (ENSSHBG00005014963) #17 ENSSHBG00005014956 PARP16 (ENSSHBG00005014952) #18 IGDCC3 (ENSSHBG00005014931) #19 IGDCC4 (ENSSHBG00005014913) #20 ENSSHBG00005014900 DPP8 (ENSSHBG00005009877) #21 HACD3 (ENSSHBG00005009669) #22 INTS14 (ENSSHBG00005009649) #23 SLC24A1 (ENSSHBG00005009620) #24 DENND4A (ENSSHBG00005009346) #25 RAB11A (ENSSHBG00005009201) #26 ENSSHBG00005009181 #27 ENSSHBG00005009158 #27 DIS3L (ENSSHBG00005009084) #28 TIPIN (ENSSHBG00005009068) #29 MAP2K1 (ENSSHBG00005009053) #31 SNAPC5 (ENSSHBG00005009047) #32 RPL4 (ENSSHBG00005009017) #33 ZWILCH (ENSSHBG00005008951) #34 LCTL (ENSSHBG00005008922) #35 SMAD6 (ENSSHBG00005000779) #36 SMAD3 (ENSSHBG00005000770) #37 Golden eagle MODERN SPECIES 21 PLEKHO2 (ENSACCG00020008731) #7 ANKDD1A (ENSACCG00020008748) #8 SPG21 (ENSACCG00020008780) #9 CLPX (ENSACCG00020008811) #16 PDCD7 (ENSACCG00020008848) #15 UBAP1L (ENSACCG00020008862) #14 KBTBD13 (ENSACCG00020008880) #13 RASL12 (ENSACCG00020008888) #12 MTFMT (ENSACCG00020008908) #10 CILP (ENSACCG00020008937) #17 ENSACCG00020008952 PARP16 (ENSACCG00020008969) #18 IGDCC3 (ENSACCG00020009002) #19 IGDCC4 (ENSACCG00020009048) #20 DPP8 (ENSACCG00020009512) #21 HACD3 (ENSACCG00020009900) #22 INTS14 (ENSACCG00020009917) #23 SLC24A1 (ENSACCG00020009936) #24 DENND4A (ENSACCG00020009959) #25 RAB11A (ENSACCG00020009992) #26 MEGF11 (ENSACCG00020010081) #27 DIS3L (ENSACCG00020010156) #28 TIPIN (ENSACCG00020010172) #29 MAP2K1 (ENSACCG00020010187) #31 SNAPC5 (ENSACCG00020010201) #32 RPL4 (ENSACCG00020000310) #33 ZWILCH (ENSACCG00020000434) #34 LCTL (ENSACCG00020000480) #35 SMAD6 (ENSACCG00020000507) #36 SMAD3 (ENSACCG00020000522) #37 AAGAB (ENSACCG00020000560) African ostrich MODERN SPECIES 834 SNRPA1 (ENSSCUG00000013266) PCSK6 (ENSSCUG00000013263) PLEKHO2 (ENSSCUG00000013256) #7 ANKDD1A (ENSSCUG00000013249) #8 SPG21 (ENSSCUG00000013243) #9 CLPX (ENSSCUG00000013235) #16 KBTBD13 (ENSSCUG00000013233) #13 ENSSCUG00000013230 MTFMT (ENSSCUG00000013228) #10 CILP (ENSSCUG00000013224) #17 ENSSCUG00000013219 PARP16 (ENSSCUG00000013209) #18 IGDCC3 (ENSSCUG00000013201) #19 IGDCC4 (ENSSCUG00000013192) #20 DPP8 (ENSSCUG00000013188) #21 HACD3 (ENSSCUG00000013184) #22 INTS14 (ENSSCUG00000013179) #23 SLC24A1 (ENSSCUG00000013178) #24 DENND4A (ENSSCUG00000013174) #25 RAB11A (ENSSCUG00000013170) #26 MEGF11 (ENSSCUG00000013159) #27 DIS3L (ENSSCUG00000013154) #28 TIPIN (ENSSCUG00000013149) #29 Australian saltwater crocodile MODERN SPECIES 31 ANKDD1A (ENSCPRG00005018498) #8 SPG21 (ENSCPRG00005000063) #9 CLPX (ENSCPRG00005000076) #16 ENSCPRG00005000092 UBAP1L (ENSCPRG00005000139) #14 KBTBD13 (ENSCPRG00005000153) #13 RASL12 (ENSCPRG00005000165) #12 MTFMT (ENSCPRG00005000206) #10 CILP (ENSCPRG00005000226) #17 GNRHR (ENSCPRG00005000240) PARP16 (ENSCPRG00005000279) #18 ENSCPRG00005000326 IGDCC3 (ENSCPRG00005000353) #19 IGDCC4 (ENSCPRG00005000364) #20 DPP8 (ENSCPRG00005000410) #21 HACD3 (ENSCPRG00005000454) #22 INTS14 (ENSCPRG00005000472) #23 ENSCPRG00005000476 #24 ENSCPRG00005000484 #24 DENND4A (ENSCPRG00005000499) #25 RAB11A (ENSCPRG00005000532) #26 MEGF11 (ENSCPRG00005000552) #27 DIS3L (ENSCPRG00005000594) #28 TIPIN (ENSCPRG00005000607) #29 MAP2K1 (ENSCPRG00005000623) #31 SNAPC5 (ENSCPRG00005000626) #32 RPL4 (ENSCPRG00005000630) #33 ZWILCH (ENSCPRG00005000651) #34 LCTL (ENSCPRG00005000669) #35 SMAD6 (ENSCPRG00005000698) #36 SMAD3 (ENSCPRG00005000730) #37 Cryptodira ANCESTRAL SPECIES 13 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00510000052431 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Testudinoidea ANCESTRAL SPECIES 6 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00510000052431 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Emydidae ANCESTRAL SPECIES 21 ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392 #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00510000052431 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.b #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 painted turtle MODERN SPECIES 802 MTFMT (ENSCPBG00000014686) #10 CILP (ENSCPBG00000014676) #17 ENSCPBG00000014672 PARP16 (ENSCPBG00000014669) #18 IGDCC3 (ENSCPBG00000014663) #19 IGDCC4 (ENSCPBG00000014652) #20 DPP8 (ENSCPBG00000014645) #21 HACD3 (ENSCPBG00000014643) #22 INTS14 (ENSCPBG00000014639) #23 SLC24A1 (ENSCPBG00000014637) #24 DENND4A (ENSCPBG00000014626) #25 RAB11A (ENSCPBG00000014614) #26 MEGF11 (ENSCPBG00000014150) #27 DIS3L (ENSCPBG00000014111) #28 ENSCPBG00000014108 #29 MAP2K1 (ENSCPBG00000014102) #31 SNAPC5 (ENSCPBG00000014100) #32 RPL4 (ENSCPBG00000014091) #33 ZWILCH (ENSCPBG00000014089) #34 LCTL (ENSCPBG00000014087) #35 NADSYN1 (ENSCPBG00000014079) DHCR7 (ENSCPBG00000014076) ZDHHC13 (ENSCPBG00000014073) Three-toed box turtle MODERN SPECIES 27 PLEKHO2 (ENSTMTG00000006762) #7 SPG21 (ENSTMTG00000006774) #9 CLPX (ENSTMTG00000006784) #16 PDCD7 (ENSTMTG00000006848) #15 UBAP1L (ENSTMTG00000006872) #14 KBTBD13 (ENSTMTG00000006908) #13 RASL12 (ENSTMTG00000006934) #12 ENSTMTG00000006996 MTFMT (ENSTMTG00000007020) #10 CILP (ENSTMTG00000007052) #17 ENSTMTG00000007083 PARP16 (ENSTMTG00000007137) #18 IGDCC3 (ENSTMTG00000007155) #19 IGDCC4 (ENSTMTG00000007233) #20 DPP8 (ENSTMTG00000007513) #21 HACD3 (ENSTMTG00000007567) #22 INTS14 (ENSTMTG00000007590) #23 SLC24A1 (ENSTMTG00000007638) #24 DENND4A (ENSTMTG00000007680) #25 RAB11A (ENSTMTG00000007735) #26 MEGF11 (ENSTMTG00000007756) #27 DIS3L (ENSTMTG00000007906) #28 ENSTMTG00000007940 #29 MAP2K1 (ENSTMTG00000007966) #31 ENSTMTG00000007987 ENSTMTG00000008003 #33 ZWILCH (ENSTMTG00000008057) #34 LCTL (ENSTMTG00000008371) #35 SMAD6 (ENSTMTG00000008403) #36 SMAD3 (ENSTMTG00000008413) #37 AAGAB (ENSTMTG00000008426) Testudinidae ANCESTRAL SPECIES 3 ENSGT00940000159506 ENSGT00530000063760.a #7 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00960000189242 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00960000193170 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Goode s thornscrub tortoise MODERN SPECIES 1 PLEKHO2 (ENSGEVG00005006925) #7 SPG21 (ENSGEVG00005006892) #9 CLPX (ENSGEVG00005006842) #16 ENSGEVG00005006801 UBAP1L (ENSGEVG00005006777) #14 KBTBD13 (ENSGEVG00005006765) #13 ENSGEVG00005006705 #12 ENSGEVG00005006652 #12 MTFMT (ENSGEVG00005006568) #10 CILP (ENSGEVG00005006481) #17 ENSGEVG00005006396 PARP16 (ENSGEVG00005006356) #18 IGDCC3 (ENSGEVG00005006282) #19 IGDCC4 (ENSGEVG00005006195) #20 DPP8 (ENSGEVG00005006156) #21 HACD3 (ENSGEVG00005006129) #22 INTS14 (ENSGEVG00005006084) #23 SLC24A1 (ENSGEVG00005006015) #24 DENND4A (ENSGEVG00005005910) #25 RAB11A (ENSGEVG00005005859) #26 ENSGEVG00005005833 MEGF11 (ENSGEVG00005005633) #27 DIS3L (ENSGEVG00005005574) #28 TIPIN (ENSGEVG00005005547) #29 MAP2K1 (ENSGEVG00005005509) #31 SNAPC5 (ENSGEVG00005005478) #32 RPL4 (ENSGEVG00005005421) #33 ZWILCH (ENSGEVG00005005317) #34 LCTL (ENSGEVG00005005207) #35 SMAD6 (ENSGEVG00005005184) #36 SMAD3 (ENSGEVG00005005160) #37 Abingdon island giant tortoise MODERN SPECIES 2548 SNRPA1 (ENSCABG00000013576) PCSK6 (ENSCABG00000013580) PLEKHO2 (ENSCABG00000013628) #7 SPG21 (ENSCABG00000013631) #9 CLPX (ENSCABG00000013633) #16 UBAP1L (ENSCABG00000013636) #14 KBTBD13 (ENSCABG00000013639) #13 RASL12 (ENSCABG00000013642) #12 MTFMT (ENSCABG00000013646) #10 CILP (ENSCABG00000013652) #17 ENSCABG00000013655 PARP16 (ENSCABG00000013665) #18 IGDCC3 (ENSCABG00000013669) #19 IGDCC4 (ENSCABG00000013673) #20 DPP8 (ENSCABG00000013708) #21 HACD3 (ENSCABG00000015923) #22 INTS14 (ENSCABG00000015930) #23 SLC24A1 (ENSCABG00000015939) #24 DENND4A (ENSCABG00000015963) #25 RAB11A (ENSCABG00000016119) #26 MEGF11 (ENSCABG00000016122) #27 ENSCABG00000016124 DIS3L (ENSCABG00000016126) #28 TIPIN (ENSCABG00000016127) #29 MAP2K1 (ENSCABG00000016130) #31 SNAPC5 (ENSCABG00000016133) #32 RPL4 (ENSCABG00000016134) #33 ZWILCH (ENSCABG00000016148) #34 LCTL (ENSCABG00000016203) #35 SMAD6 (ENSCABG00000016207) #36 Chinese turtle MODERN SPECIES 1534 ANKDD1A (ENSPSIG00000013712) #8 SPG21 (ENSPSIG00000013709) #9 CLPX (ENSPSIG00000013590) #16 PDCD7 (ENSPSIG00000013569) #15 UBAP1L (ENSPSIG00000013562) #14 KBTBD13 (ENSPSIG00000000666) #13 RASL12 (ENSPSIG00000013266) #12 MTFMT (ENSPSIG00000013256) #10 CILP (ENSPSIG00000013247) #17 ENSPSIG00000013222 PARP16 (ENSPSIG00000013215) #18 IGDCC3 (ENSPSIG00000013033) #19 IGDCC4 (ENSPSIG00000012679) #20 ENSPSIG00000000654 DPP8 (ENSPSIG00000012529) #21 HACD3 (ENSPSIG00000012431) #22 INTS14 (ENSPSIG00000012238) #23 SLC24A1 (ENSPSIG00000012130) #24 DENND4A (ENSPSIG00000011965) #25 RAB11A (ENSPSIG00000011930) #26 ENSPSIG00000011794 #27 ENSPSIG00000011768 #27 DIS3L (ENSPSIG00000011629) #28 TIPIN (ENSPSIG00000011616) #29 MAP2K1 (ENSPSIG00000011457) #31 RPL4 (ENSPSIG00000011400) #33 ZWILCH (ENSPSIG00000011386) #34 LCTL (ENSPSIG00000011332) #35 Anura ANCESTRAL SPECIES ENSGT00940000154170.B #8 ENSGT00390000007857 #9 ENSGT00390000017625 #16 ENSGT00390000017392.g #15 ENSGT00390000008092.b #14 ENSGT00940000161629 #13 ENSGT00940000160167 #12 ENSGT00390000017828 #10 ENSGT00390000018225.A ENSGT00390000008152.B.b #17 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000010331 #32 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000158146 #36 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Leishan spiny toad MODERN SPECIES 6 KBTBD13 (ENSLLEG00000007189) #13 RASL12 (ENSLLEG00000007219) #12 ENSLLEG00000007271 ENSLLEG00000007308 #10 ENSLLEG00000007446 ENSLLEG00000007538 ENSLLEG00000007550 CILP (ENSLLEG00000007563) #17 ENSLLEG00000007608 ENSLLEG00000007619 ENSLLEG00000007629 PARP16 (ENSLLEG00000007698) #18 IGDCC3 (ENSLLEG00000007896) #19 IGDCC4 (ENSLLEG00000005550) #20 DPP8 (ENSLLEG00000005938) #21 HACD3 (ENSLLEG00000006102) #22 INTS14 (ENSLLEG00000006176) #23 SLC24A1 (ENSLLEG00000006354) #24 DENND4A (ENSLLEG00000006505) #25 RAB11A (ENSLLEG00000007065) #26 MEGF11 (ENSLLEG00000007218) #27 ENSLLEG00000007739 DIS3L (ENSLLEG00000007758) #28 TIPIN (ENSLLEG00000007891) #29 ENSLLEG00000007941 #31 SNAPC5 (ENSLLEG00000008005) #32 ENSLLEG00000008024 ENSLLEG00000008052 #33 ZWILCH (ENSLLEG00000008260) #34 LCTL (ENSLLEG00000008419) #35 ENSLLEG00000009059 Frog MODERN SPECIES 3 ankdd1a (ENSXETG00000006661) #8 spg21 (ENSXETG00000006659) #9 clpx (ENSXETG00000006656) #16 pdcd7 (ENSXETG00000040352) #15 ubap1l (ENSXETG00000036190) #14 kbtbd13 (ENSXETG00000006653) #13 rasl12 (ENSXETG00000040362) #12 mtfmt (ENSXETG00000006652) #10 XB5959486 [provisional] (ENSXETG00000006651) cilp (ENSXETG00000006650) #17 gnrhr2/nmi (ENSXETG00000038283) parp16 (ENSXETG00000006648) #18 igdcc3 (ENSXETG00000033022) #19 igdcc4 (ENSXETG00000006647) dpp8 (ENSXETG00000006646) #21 hacd3 (ENSXETG00000030041) #22 ints14 (ENSXETG00000006644) #23 slc24a1 (ENSXETG00000033301) #24 dennd4a (ENSXETG00000006641) #25 rab11a (ENSXETG00000006639) #26 megf11 (ENSXETG00000015852) #27 dis3l (ENSXETG00000015865) #28 tipin (ENSXETG00000024752) #29 map2k1 (ENSXETG00000015887) #31 snapc5 (ENSXETG00000015893) rpl4 (ENSXETG00000015898) #33 zwilch (ENSXETG00000015894) #34 lctl (ENSXETG00000015904) #35 smad6 (ENSXETG00000015939) #36 smad3 (ENSXETG00000007804) #37 aagab (ENSXETG00000007805) Coelacanth MODERN SPECIES 280 ADAMTS17 (ENSLACG00000017235) LYSMD4 (ENSLACG00000017183) CLPX (ENSLACG00000017095) #16 PDCD7 (ENSLACG00000017066) #15 KBTBD13 (ENSLACG00000016995) #13 RASL12 (ENSLACG00000016896) #12 MTFMT (ENSLACG00000016817) #10 si:ch73-314g15.3 (ENSLACG00000016787) CILP (ENSLACG00000016729) #17 gnrhr1 (ENSLACG00000016584) ENSLACG00000016540 PARP16 (ENSLACG00000016410) #18 IGDCC3 (ENSLACG00000015818) #19 IGDCC4 (ENSLACG00000014876) #20 DPP8 (ENSLACG00000014154) #21 HACD3 (ENSLACG00000013954) #22 INTS14 (ENSLACG00000013825) #23 DENND4A (ENSLACG00000012485) #25 RAB11A (ENSLACG00000012184) #26 MEGF11 (ENSLACG00000010981) #27 DIS3L (ENSLACG00000007995) #28 TIPIN (ENSLACG00000007807) #29 MAP2K1 (ENSLACG00000006464) #31 RPL4 (ENSLACG00000006259) #33 ZWILCH (ENSLACG00000005435) #34 LCTL (ENSLACG00000005143) #35 crybgx (ENSLACG00000004693) SNAPC5 (ENSLACG00000004572) #32 Actinopterygii ANCESTRAL SPECIES 92 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000153499.b.b.d #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Neopterygii ANCESTRAL SPECIES 85 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000008152.B.b #17 ENSGT00950000183129.a #18 ENSGT00940000156969 #19 ENSGT00940000159637 #20 ENSGT00940000160717 #21 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 Osteoglossocephalai ANCESTRAL SPECIES 148 ENSGT00940000156926.d ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369 #35 ENSGT00940000153499.b.b.d #37 ENSGT00390000007218 ENSGT00390000008908 Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES ENSGT00530000062962.b.a.e #22 Euteleosteomorpha ANCESTRAL SPECIES 261 ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000158477.a.a ENSGT00950000182959.b.a.a ENSGT00940000157490 ENSGT00390000002049.c.b ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.a ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #35 ENSGT00940000165890 Protacanthopterygii ANCESTRAL SPECIES 101 ENSGT00940000160309.e.b ENSGT00940000158707.a.a ENSGT00390000001802 ENSGT00940000159464 ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000153901.a.b.a ENSGT01000000216979 ENSGT00940000158477.a.a ENSGT00950000182959.b.a.a ENSGT00940000157490 ENSGT00390000002049.c.b ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000155744.t.a ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000154914.vb #26 ENSGT00940000155333.A.a ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #35 ENSGT00940000165890 ENSGT00940000168079 ENSGT00390000011190 ENSGT00940000157324 ENSGT00510000046704.b.b ENSGT00940000158441 ENSGT00510000047412.b ENSGT00940000156422 Salmoninae ANCESTRAL SPECIES 1 ENSGT00940000155733.a.a ENSGT00940000160892.f ENSGT01030000234588.b.b.b.b.a.a.b.c ENSGT01030000234588.b.b.b.b.a.b.a.e.b.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000153901.a.b.a ENSGT01000000216979 ENSGT00940000158477.a.a ENSGT00950000182959.b.a.a ENSGT00940000157490 ENSGT00390000002049.c.b ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000155744.t.a ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B.j #25 ENSGT00940000154914.vb #26 ENSGT00940000155333.A.a ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #35 ENSGT00940000165890 ENSGT00940000168079 ENSGT00390000011190 ENSGT00940000157324 ENSGT00510000046704.b.b ENSGT00940000158441 ENSGT00510000047412.b ENSGT00940000156422.i Huchen MODERN SPECIES 2902 ENSHHUG00000038923 ENSHHUG00000038918 arih1l (ENSHHUG00000038911) HACD3 (ENSHHUG00000038802) #22 ENSHHUG00000038769 #24 Salmoninae_a ANCESTRAL SPECIES 85 ENSGT00940000158707.a.a ENSGT00390000001802 ENSGT00940000159464 ENSGT01030000234588.b.b.b.b.a.b.b.b ENSGT01030000234588.b.b.b.b.a.b.b.a.b ENSGT01030000234588.b.b.b.b.a.b.b.a.a.b ENSGT00940000153901.a.b.a ENSGT00940000158477.a.a ENSGT00950000182959.b.a.a ENSGT00940000157490 ENSGT00390000002049.c.b ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000155744.t.a ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B.j #25 ENSGT00940000154914.vb #26 ENSGT00940000155333.A.a.i.a ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #35 ENSGT00940000165890 ENSGT00390000011190 ENSGT00940000157324.l ENSGT00510000046704.b.b.a ENSGT00940000158441 ENSGT00510000047412.b ENSGT00940000156422.i ENSGT00940000156422.j Salmo DUPLICATION Salmo ANCESTRAL SPECIES 112 ENSGT00940000163911.b.c.a.b ENSGT01030000234588.b.b.b.b.a.b.b.b ENSGT01030000234588.b.b.b.b.a.b.b.a.b ENSGT01030000234588.b.b.b.b.a.b.b.a.a.b ENSGT00940000153901.a.b.a ENSGT00940000158477.a.a.d ENSGT01000000216979.a ENSGT00940000158477.a.a.c ENSGT00950000182959.b.a.a ENSGT00940000157490 ENSGT00390000002049.c.b.l ENSGT00940000160967.f.b ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d.b ENSGT00940000155744.t.a ENSGT00530000062962.b.a.e.a #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B.j.b #25 ENSGT00940000154914.vb.a #26 ENSGT00940000155333.A.a.j ##27 ENSGT00940000155836.B.j.a #25 ENSGT00940000154914.vb.b #26 ENSGT00940000155333.A.a.i.a ##27 ENSGT00530000063106.B.j #28 ENSGT00390000005764.s #29 ENSGT00390000005764.t #29 ENSGT00940000157369.b #35 ENSGT00940000165890.b ENSGT00940000168079 ENSGT00940000157324.k ENSGT00510000046704.b.b.a.c Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 18 tnni2b.2 (ENSSSAG00000010154) TNNI2 (ENSSSAG00000010176) TNNI2 (ENSSSAG00000084513) ENSSSAG00000095150 ENSSSAG00000103815 ENSSSAG00000108582 TNNT3 (ENSSSAG00000009998) ENSSSAG00000010004 ENSSSAG00000056579 ENSSSAG00000104869 ENSSSAG00000010246 ENSSSAG00000119131 ENSSSAG00000009811 ENSSSAG00000009961 ENSSSAG00000095519 HACD3 (ENSSSAG00000095799) #22 SLC24A1 (ENSSSAG00000010183) #24 DENND4A (ENSSSAG00000082487) #25 RAB11A (ENSSSAG00000062971) #26 ENSSSAG00000092940 ##27 dis3l (ENSSSAG00000121052) #28 tipin (ENSSSAG00000043439) #29 lctla (ENSSSAG00000043842) #35 crybgx (ENSSSAG00000069661) RAMAC (ENSSSAG00000069672) homer2 (ENSSSAG00000098183) WHAMM (ENSSSAG00000110696) ENSSSAG00000095380 ENSSSAG00000073264 pde8a (ENSSSAG00000094947) gatm (ENSSSAG00000055493) Atlantic salmon MODERN SPECIES 2 ENSSSAG00000096849 ENSSSAG00000102508 tnni2b.2 (ENSSSAG00000115361) TNNI2 (ENSSSAG00000009799) ENSSSAG00000108614 ENSSSAG00000084840 myod1 (ENSSSAG00000040107) TNNT3 (ENSSSAG00000010002) ENSSSAG00000096205 ENSSSAG00000113698 ENSSSAG00000104282 ENSSSAG00000094543 ENSSSAG00000101082 ENSSSAG00000072984 ENSSSAG00000099816 HACD3 (ENSSSAG00000009594) #22 SLC24A1 (ENSSSAG00000009849) #24 DENND4A (ENSSSAG00000100635) #25 RAB11A (ENSSSAG00000099276) #26 ENSSSAG00000103573 ##27 tipin (ENSSSAG00000082602) #29 ENSSSAG00000008839 #35 crybgx (ENSSSAG00000008876) HOMER2 (ENSSSAG00000103439) ENSSSAG00000121906 ENSSSAG00000092676 FSD2 (ENSSSAG00000073255) ENSSSAG00000009779 pde8a (ENSSSAG00000097988) gatm (ENSSSAG00000069650) ENSSSAG00000108011 River trout MODERN SPECIES 21 ENSSTUG00000003710 ctsd (ENSSTUG00000003756) ENSSTUG00000004269 ENSSTUG00000004274 TNNI2 (ENSSTUG00000004289) tnni2b.1 (ENSSTUG00000004312) ENSSTUG00000004360 ENSSTUG00000004371 TNNT3 (ENSSTUG00000004390) myod1 (ENSSTUG00000004466) aph1b (ENSSTUG00000004478) ENSSTUG00000004484 ENSSTUG00000004489 NR2E3 (ENSSTUG00000004529) ARIH1 (ENSSTUG00000004569) HACD3 (ENSSTUG00000004705) #22 SLC24A1 (ENSSTUG00000004931) #24 dennd4a (ENSSTUG00000004971) #25 rab11a (ENSSTUG00000005754) #26 ENSSTUG00000005780 ##27 dis3l (ENSSTUG00000005812) #28 tipin (ENSSTUG00000005839) #29 lctla (ENSSTUG00000005848) #35 crybgx (ENSSTUG00000005860) ENSSTUG00000005865 HOMER2 (ENSSTUG00000005871) WHAMM (ENSSTUG00000005932) FSD2 (ENSSTUG00000005940) ENSSTUG00000005958 pde8a (ENSSTUG00000006015) ENSSTUG00000007632 Salmo ANCESTRAL SPECIES ENSGT00530000062962.b.a.e.b #22 River trout MODERN SPECIES 3 ctsd (ENSSTUG00000001706) ENSSTUG00000001858 ENSSTUG00000001870 ENSSTUG00000001875 TNNI2 (ENSSTUG00000001889) tnni2b.1 (ENSSTUG00000001896) ENSSTUG00000001903 ENSSTUG00000001917 myod1 (ENSSTUG00000001933) OTOG (ENSSTUG00000001950) aph1b (ENSSTUG00000002066) ENSSTUG00000002075 ENSSTUG00000002080 NR2E3 (ENSSTUG00000002100) arih1l (ENSSTUG00000002114) HACD3 (ENSSTUG00000002183) #22 SLC24A1 (ENSSTUG00000002229) #24 dennd4a (ENSSTUG00000002300) #25 rab11a (ENSSTUG00000004309) #26 ENSSTUG00000004325 leo1 (ENSSTUG00000004341) tmod2 (ENSSTUG00000004523) ppfia1 (ENSSTUG00000004645) ENSSTUG00000007012 ENSSTUG00000007041 arfgap2 (ENSSTUG00000007061) pex16 (ENSSTUG00000007120) slc22a18 (ENSSTUG00000007145) cars1 (ENSSTUG00000007209) cpt1aa (ENSSTUG00000008905) lingo1b (ENSSTUG00000009375) Oncorhynchus ANCESTRAL SPECIES ENSGT01010000222687.A.a ENSGT01010000223078.a ENSGT01010000223078.b ENSGT00390000004417.b ENSGT00390000004215.a.b.b.c.a.b.a.c.b ENSGT00940000160309.e.b.d ENSGT00940000158707.a.a ENSGT00390000001802 ENSGT00940000159464 ENSGT00940000157490 ENSGT00390000002049.c.b ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000155744.t.a ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B.j #25 ENSGT00940000154914.vb #26 ENSGT00940000155333.A.a.i.a ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #35 ENSGT00940000165890 ENSGT00390000011190 ENSGT00940000157324.l ENSGT00510000046704.b.b.a ENSGT00940000158441 ENSGT00940000156422.i ENSGT00390000011613 ENSGT00940000164068.a.b.a.a.a Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 18 ENSOMYG00000029425 ENSOMYG00000070828 ENSOMYG00000067636 ENSOMYG00000029106 ENSOMYG00000060665 ENSOMYG00000051029 ENSOMYG00000014317 myod (ENSOMYG00000061213) ENSOMYG00000052295 ENSOMYG00000040832 ENSOMYG00000076821 ENSOMYG00000061598 ENSOMYG00000062139 ENSOMYG00000054709 ENSOMYG00000074482 HACD3 (ENSOMYG00000040606) #22 SLC24A1 (ENSOMYG00000004910) #24 DENND4A (ENSOMYG00000065265) #25 RAB11A (ENSOMYG00000026657) #26 ENSOMYG00000074521 ##27 ENSOMYG00000021812 dis3l (ENSOMYG00000048031) #28 tipin (ENSOMYG00000050576) #29 lctla (ENSOMYG00000004788) #35 crybgx (ENSOMYG00000049421) ENSOMYG00000053924 homer2 (ENSOMYG00000000066) WHAMM (ENSOMYG00000067414) FSD2 (ENSOMYG00000050212) ENSOMYG00000049883 ENSOMYG00000075465 Rainbow trout MODERN SPECIES 27 ENSOMYG00000030016 ENSOMYG00000029399 ENSOMYG00000057374 ENSOMYG00000029082 ENSOMYG00000055514 TNNT3 (ENSOMYG00000049303) myod1 (ENSOMYG00000029242) ENSOMYG00000069614 ENSOMYG00000063706 ENSOMYG00000060149 ENSOMYG00000005082 ENSOMYG00000005006 ENSOMYG00000050119 ENSOMYG00000004974 ENSOMYG00000023825 HACD3 (ENSOMYG00000059785) #22 SLC24A1 (ENSOMYG00000004858) #24 DENND4A (ENSOMYG00000076284) #25 RAB11A (ENSOMYG00000049890) #26 ENSOMYG00000062709 ##27 dis3l (ENSOMYG00000052777) #28 tipin (ENSOMYG00000074288) #29 lctla (ENSOMYG00000056022) #35 crybgx (ENSOMYG00000048390) ENSOMYG00000050671 homer2 (ENSOMYG00000063764) WHAMM (ENSOMYG00000057419) FSD2 (ENSOMYG00000048469) ENSOMYG00000058373 ENSOMYG00000077619 ENSOMYG00000064324 Oncorhynchus_a ANCESTRAL SPECIES 106 ENSGT01010000222687.A.a ENSGT01010000223078.a ENSGT01010000223078.b ENSGT00390000004417.b ENSGT00390000004215.a.b.b.c.a.b.a.c.b ENSGT00940000160309.e.b.d ENSGT00940000158707.a.a ENSGT00390000001802 ENSGT00940000159464 ENSGT00940000157490 ENSGT00390000002049.c.b ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000155744.t.a ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #35 ENSGT00940000165890 ENSGT00390000011190 ENSGT00940000157324.l ENSGT00510000046704.b.b.b ENSGT00940000158441 ENSGT00940000156422.i ENSGT00390000011613 ENSGT00940000164068.a.b.a.a.a ENSGT00940000157938.j.b ENSGT00940000163460.a.a.c.a.b ENSGT00940000157542 Coho salmon DUPLICATION Coho salmon MODERN SPECIES 32 ENSOKIG00005017964 ENSOKIG00005017958 TNNI2 (ENSOKIG00005017950) tnni2b.1 (ENSOKIG00005017934) tnni2b.1 (ENSOKIG00005017921) ENSOKIG00005017897 TNNT3 (ENSOKIG00005017863) MYOD1 (ENSOKIG00005017854) ENSOKIG00005017845 OTOG (ENSOKIG00005017697) aph1b (ENSOKIG00005017675) ENSOKIG00005017668 ENSOKIG00005017602 NR2E3 (ENSOKIG00005043003) arih1l (ENSOKIG00005042766) HACD3 (ENSOKIG00005042645) #22 SLC24A1 (ENSOKIG00005042621) #24 ENSOKIG00005042607 DENND4A (ENSOKIG00005041726) #25 ENSOKIG00005041656 ENSOKIG00005041640 rab11a (ENSOKIG00005041589) #26 dis3l (ENSOKIG00005040437) #28 ENSOKIG00005040323 #29 lctla (ENSOKIG00005040258) #35 crybgx (ENSOKIG00005040244) ENSOKIG00005040199 HOMER2 (ENSOKIG00005040071) WHAMM (ENSOKIG00005040049) FSD2 (ENSOKIG00005040033) ENSOKIG00005040012 Coho salmon MODERN SPECIES 207 ARIH1 (ENSOKIG00005025617) HACD3 (ENSOKIG00005025529) #22 ENSOKIG00005025517 #24 Chinook salmon MODERN SPECIES 471 ENSOTSG00005037943 ENSOTSG00005037945 ENSOTSG00005037963 ENSOTSG00005037964 kif3a (ENSOTSG00005037975) ENSOTSG00005040087 HACD3 (ENSOTSG00005040089) #22 Northern pike MODERN SPECIES 1 ENSELUG00000033770 ENSELUG00000028980 ENSELUG00000028322 tnni2b.1 (ENSELUG00000018719) ENSELUG00000018743 ENSELUG00000018803 ENSELUG00000026443 TNNT3 (ENSELUG00000018827) MYOD1 (ENSELUG00000018844) OTOG (ENSELUG00000018933) aph1b (ENSELUG00000018962) ENSELUG00000018968 ENSELUG00000019041 NR2E3 (ENSELUG00000019079) arih1l (ENSELUG00000019125) HACD3 (ENSELUG00000019142) #22 SLC24A1 (ENSELUG00000019158) #24 dennd4a (ENSELUG00000000821) #25 RAB11B (ENSELUG00000019240) ENSELUG00000019353 ##27 dis3l (ENSELUG00000019420) #28 tipin (ENSELUG00000019453) #29 lctla (ENSELUG00000019497) #35 crybgx (ENSELUG00000019531) homer2 (ENSELUG00000019561) ENSELUG00000019542 WHAMM (ENSELUG00000019600) ENSELUG00000019658 ENSELUG00000019621 pde8a (ENSELUG00000019742) gatm (ENSELUG00000001472) Acanthomorphata ANCESTRAL SPECIES 28 ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000167951 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00940000163716.c.b ENSGT00940000161051.a.a.b.a ENSGT00940000161832.a ENSGT00390000017480 ENSGT00390000014065 ENSGT00390000009453.fb.b Euacanthomorphacea ANCESTRAL SPECIES 44 ENSGT00940000158287 ENSGT00940000154963 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00940000163716.c.b ENSGT00940000161832.a ENSGT00390000017480 ENSGT00390000014065 ENSGT00390000009453.fb.b ENSGT00940000156813 ENSGT00390000011608 Percomorphaceae ANCESTRAL SPECIES 15 ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Tiger tail seahorse MODERN SPECIES 136 ENSHCOG00000006770 ENSHCOG00000006783 iqgap1 (ENSHCOG00000006905) ENSHCOG00000006926 CRTC3 (ENSHCOG00000006945) ENSHCOG00000006965 SERINC4 (ENSHCOG00000006989) hypk (ENSHCOG00000007002) mfap1 (ENSHCOG00000007017) hddc3 (ENSHCOG00000007034) ENSHCOG00000007050 prc1b (ENSHCOG00000007079) ptpmt1 (ENSHCOG00000000812) ndufs3 (ENSHCOG00000007117) slc22a18 (ENSHCOG00000007148) HACD3 (ENSHCOG00000000227) #22 SLC24A1 (ENSHCOG00000007190) #24 ENSHCOG00000007227 #25 socs4 (ENSHCOG00000007249) wdhd1 (ENSHCOG00000007286) ENSHCOG00000007299 gch1 (ENSHCOG00000007311) SAMD4A (ENSHCOG00000007338) pacsin3 (ENSHCOG00000007361) GLG1 (ENSHCOG00000007399) tnni2b.1 (ENSHCOG00000007414) aph1b (ENSHCOG00000007434) OTOG (ENSHCOG00000007493) myod1 (ENSHCOG00000007505) TNNT3 (ENSHCOG00000007514) ENSHCOG00000007520 Percomorphaceae_B ANCESTRAL SPECIES 12 ENSGT00940000154963 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT01030000234990 Ovalentaria ANCESTRAL SPECIES 17 ENSGT00940000154963 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Atherinomorphae ANCESTRAL SPECIES 8 ENSGT00940000158287 ENSGT00940000163467.a.b.b.a.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000177294 Oryzias ANCESTRAL SPECIES 79 ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 ENSGT00940000162993 Oryzias_b ANCESTRAL SPECIES 81 ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT01090000261483 ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00390000013481.c.a ENSGT00390000002030 ENSGT00940000166202 ENSGT00940000153875.d.b ENSGT00940000155024.a.b.d ENSGT00940000153216.a.a.c.a ENSGT00940000153216.a.a.c.b.h ENSGT00940000154258.b ENSGT00950000183083.a.d.a ENSGT01030000234633.A.a.a ENSGT00940000156431 ENSGT00940000155405 ENSGT00940000158481.d Indian medaka MODERN SPECIES 25 AFDN (ENSOMEG00000001895) ENSOMEG00000001833 rfx6 (ENSOMEG00000001825) pyroxd1 (ENSOMEG00000000678) ETNK1 (ENSOMEG00000001804) ENSOMEG00000001795 sox5 (ENSOMEG00000001776) ENSOMEG00000001762 ENSOMEG00000001760 lrmp (ENSOMEG00000001741) dnai7 (ENSOMEG00000001668) lyrm5a (ENSOMEG00000001658) ENSOMEG00000001652 SLC5A8 (ENSOMEG00000001611) HACD3 (ENSOMEG00000023636) #22 ENSOMEG00000023620 #24 ENSOMEG00000023603 UTP20 (ENSOMEG00000023583) arl1 (ENSOMEG00000023497) DENND11 (ENSOMEG00000023488) ENSOMEG00000023481 mapk11 (ENSOMEG00000023468) mapk12b (ENSOMEG00000023455) ENSOMEG00000023440 atp23 (ENSOMEG00000023435) lrig3 (ENSOMEG00000023429) zgc:165507 (ENSOMEG00000023409) ENSOMEG00000023392 ENSOMEG00000023376 ETV6 (ENSOMEG00000023372) Javanese ricefish MODERN SPECIES 17 BRSK2 (ENSOJAG00000004004) rassf7b (ENSOJAG00000003851) ENSOJAG00000003836 guca1g (ENSOJAG00000003824) ENSOJAG00000003695 ENSOJAG00000003645 ENSOJAG00000003557 ENSOJAG00000003509 SHANK2 (ENSOJAG00000003489) CTTN (ENSOJAG00000003344) ppfia1 (ENSOJAG00000001530) NR2E3 (ENSOJAG00000001358) ENSOJAG00000001351 slc22a18 (ENSOJAG00000001340) ENSOJAG00000001336 HACD3 (ENSOJAG00000001325) #22 SLC24A1 (ENSOJAG00000001310) #24 dennd4a (ENSOJAG00000001299) #25 gch1 (ENSOJAG00000001275) wdhd1 (ENSOJAG00000001255) socs4 (ENSOJAG00000001249) tppp3 (ENSOJAG00000001244) ENSOJAG00000001238 trpm1a (ENSOJAG00000001224) ENSOJAG00000001203 ENSOJAG00000001193 ENSOJAG00000001189 ENSOJAG00000001186 ctrb.3 (ENSOJAG00000001170) ctrb.2 (ENSOJAG00000001162) ENSOJAG00000001150 Oryzias_a ANCESTRAL SPECIES 116 ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT00390000002049.c.b ENSGT00940000157490 Japanese Medaka HdrR MODERN SPECIES 17 ENSORLG00000024280 ENSORLG00000000045 ENSORLG00000024777 ENSORLG00000026014 SHANK2 (ENSORLG00000000038) CTTN (ENSORLG00000000034) ENSORLG00000027345 PPFIA1 (ENSORLG00000000029) ENSORLG00000030646 ENSORLG00000000021 ENSORLG00000000025 ENSORLG00000027474 ENSORLG00000028710 NR2E3 (ENSORLG00000000011) slc22a18 (ENSORLG00000000010) ENSORLG00000000006 #22 ENSORLG00000028788 ENSORLG00000028322 ENSORLG00000026580 ENSORLG00000026697 ENSORLG00000023506 ENSORLG00000030232 ENSORLG00000026795 ENSORLG00000022981 SLC24A1 (ENSORLG00000025324) #24 ENSORLG00000025274 #25 socs4 (ENSORLG00000023960) ENSORLG00000029540 ENSORLG00000026358 ENSORLG00000025194 ENSORLG00000029333 Chinese medaka MODERN SPECIES 4167 ENSOSIG00000013685 #22 Cyprinodontiformes ANCESTRAL SPECIES 9 ENSGT00940000158287 ENSGT00940000163467.a.b.b.a.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000177294 Aplocheiloidei ANCESTRAL SPECIES 39 ENSGT00940000158287 ENSGT00940000163467.a.b.b.a.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000177294 Mangrove rivulus MODERN SPECIES 94 NELL1 (ENSKMAG00000020064) ENSKMAG00000020107 slc6a5 (ENSKMAG00000020116) prmt3 (ENSKMAG00000020166) htatip2 (ENSKMAG00000020191) dbx1a (ENSKMAG00000020206) NAV2 (ENSKMAG00000020245) e2f8 (ENSKMAG00000020305) csrp3 (ENSKMAG00000020338) zdhhc13 (ENSKMAG00000020369) mpped2a (ENSKMAG00000020431) ENSKMAG00000020454 ENSKMAG00000020462 NR2E3 (ENSKMAG00000020481) slc22a18 (ENSKMAG00000020503) HACD3 (ENSKMAG00000020519) #22 SAMD4A (ENSKMAG00000020543) gch1 (ENSKMAG00000020574) wdhd1 (ENSKMAG00000020604) socs4 (ENSKMAG00000020674) ENSKMAG00000020680 dennd4a (ENSKMAG00000020759) #25 SLC24A1 (ENSKMAG00000020920) #24 ero1a (ENSKMAG00000020950) pacsin3 (ENSKMAG00000021024) glg1b (ENSKMAG00000021075) tnni2b.1 (ENSKMAG00000021151) aph1b (ENSKMAG00000021168) OTOG (ENSKMAG00000021189) myod1 (ENSKMAG00000021238) TNNT3 (ENSKMAG00000021246) Turquoise killifish MODERN SPECIES 1616 ENSNFUG00015003982 TNNT3 (ENSNFUG00015003986) myod1 (ENSNFUG00015003991) aph1b (ENSNFUG00015004030) ENSNFUG00015004036 tnni2b.1 (ENSNFUG00015004041) ENSNFUG00015004056 E2F8 (ENSNFUG00015004061) CSRP3 (ENSNFUG00015004067) ZDHHC13 (ENSNFUG00015004092) MPPED2 (ENSNFUG00015004145) ENSNFUG00015004153 STRA6 (ENSNFUG00015004168) NR2E3 (ENSNFUG00015004197) SLC22A18 (ENSNFUG00015004215) PTPLAD1 (ENSNFUG00015004247) #22 SLC24A1 (ENSNFUG00015004331) #24 dennd4a (ENSNFUG00015004412) #25 ENSNFUG00015004502 socs4 (ENSNFUG00015004506) WDHD1 (ENSNFUG00015004515) GCH1 (ENSNFUG00015004539) SAMD4A (ENSNFUG00015004563) PACSIN3 (ENSNFUG00015004592) ENSNFUG00015004640 pacsin3 (ENSNFUG00015004647) GLG1 (ENSNFUG00015004673) NAV2 (ENSNFUG00015005223) OLA.2304 (ENSNFUG00015006227) HTATIP2 (ENSNFUG00015006232) PRMT3 (ENSNFUG00015006258) Cyprinodontoidei ANCESTRAL SPECIES 6 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000177294 NAME_4 ANCESTRAL SPECIES 66 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A.ac.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030.n ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000177294 Sheepshead minnow MODERN SPECIES 198 slc6a5 (ENSCVAG00000004641) prmt3 (ENSCVAG00000004723) htatip2 (ENSCVAG00000004752) dbx1a (ENSCVAG00000000143) NAV2 (ENSCVAG00000004848) e2f8 (ENSCVAG00000004920) csrp3 (ENSCVAG00000004937) zdhhc13 (ENSCVAG00000004950) mpped2a (ENSCVAG00000004974) ENSCVAG00000005070 ENSCVAG00000005078 ENSCVAG00000005151 NR2E3 (ENSCVAG00000005210) slc22a18 (ENSCVAG00000005226) HACD3 (ENSCVAG00000005529) #22 SLC24A1 (ENSCVAG00000005559) #24 dennd4a (ENSCVAG00000005774) #25 socs4 (ENSCVAG00000005809) wdhd1 (ENSCVAG00000006106) gch1 (ENSCVAG00000006132) SAMD4A (ENSCVAG00000006183) ero1a (ENSCVAG00000006196) pacsin3 (ENSCVAG00000006247) glg1b (ENSCVAG00000006375) tnni2b.1 (ENSCVAG00000006390) aph1b (ENSCVAG00000006407) OTOG (ENSCVAG00000000628) myod1 (ENSCVAG00000006504) TNNT3 (ENSCVAG00000006519) ENSCVAG00000006531 Mummichog MODERN SPECIES 2279 lrp4 (ENSFHEG00000021307) ENSFHEG00000021337 NELL1 (ENSFHEG00000021393) slc6a5 (ENSFHEG00000021451) prmt3 (ENSFHEG00000021475) htatip2 (ENSFHEG00000021519) dbx1a (ENSFHEG00000021545) NAV2 (ENSFHEG00000022260) csrp3 (ENSFHEG00000022329) zdhhc13 (ENSFHEG00000022440) mpped2a (ENSFHEG00000022477) ENSFHEG00000022514 ENSFHEG00000022562 NR2E3 (ENSFHEG00000022629) slc22a18 (ENSFHEG00000022663) HACD3 (ENSFHEG00000022712) #22 SLC24A1 (ENSFHEG00000022722) #24 Poeciliinae ANCESTRAL SPECIES 13 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00390000011262.e.b ENSGT00950000182973.b.a ENSGT00390000007753.b ENSGT00940000157933 ENSGT00390000013481.c.a ENSGT00390000002030.l ENSGT00940000166202 ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Poecilia ANCESTRAL SPECIES 4 ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00390000011262.e.b ENSGT00950000182973.b.a ENSGT00390000007753.b ENSGT00940000157933 ENSGT00390000013481.c.a ENSGT00390000002030.l ENSGT00940000166202 ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 NAME_6 ANCESTRAL SPECIES 92 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a.d.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a.d.a ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a.c ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00390000011262.e.b ENSGT00950000182973.b.a ENSGT00390000007753.b ENSGT00940000157933 ENSGT00390000013481.c.a ENSGT00390000002030.l ENSGT00940000166202 ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Sailfin molly MODERN SPECIES 566 ENSPLAG00000003653 ENSPLAG00000003638 NR2E3 (ENSPLAG00000003619) ENSPLAG00000003612 ENSPLAG00000003597 ENSPLAG00000003596 slc22a18 (ENSPLAG00000003591) HACD3 (ENSPLAG00000003583) #22 SLC24A1 (ENSPLAG00000000057) #24 dennd4a (ENSPLAG00000003539) #25 glg1b (ENSPLAG00000003435) pacsin3 (ENSPLAG00000003395) ero1a (ENSPLAG00000003361) ENSPLAG00000003352 Amazon molly MODERN SPECIES 350 prmt3 (ENSPFOG00000003622) htatip2 (ENSPFOG00000003994) dbx1a (ENSPFOG00000004028) NAV2 (ENSPFOG00000004146) ENSPFOG00000000656 e2f8 (ENSPFOG00000005584) csrp3 (ENSPFOG00000023629) zdhhc13 (ENSPFOG00000005728) mpped2a (ENSPFOG00000005905) ENSPFOG00000020325 ENSPFOG00000005972 NR2E3 (ENSPFOG00000006106) ENSPFOG00000006219 ENSPFOG00000006238 slc22a18 (ENSPFOG00000006271) HACD3 (ENSPFOG00000006432) #22 ENSPFOG00000006545 #24 dennd4a (ENSPFOG00000006791) #25 glg1b (ENSPFOG00000007965) pacsin3 (ENSPFOG00000008277) ero1a (ENSPFOG00000008385) SAMD4A (ENSPFOG00000008620) gch1 (ENSPFOG00000008835) wdhd1 (ENSPFOG00000008914) ENSPFOG00000022454 socs4 (ENSPFOG00000009206) tnni2b.1 (ENSPFOG00000009219) aph1b (ENSPFOG00000009273) OTOG (ENSPFOG00000009345) myod1 (ENSPFOG00000009843) TNNT3 (ENSPFOG00000009845) Guppy MODERN SPECIES 455 NELL1 (ENSPREG00000019953) slc6a5 (ENSPREG00000019890) prmt3 (ENSPREG00000019857) htatip2 (ENSPREG00000019845) dbx1a (ENSPREG00000019836) ENSPREG00000019829 NAV2 (ENSPREG00000019505) e2f8 (ENSPREG00000019385) csrp3 (ENSPREG00000019363) zdhhc13 (ENSPREG00000019340) mpped2a (ENSPREG00000019313) ENSPREG00000019289 ENSPREG00000019267 ENSPREG00000019254 slc22a18 (ENSPREG00000019227) HACD3 (ENSPREG00000019209) #22 SLC24A1 (ENSPREG00000019149) #24 dennd4a (ENSPREG00000018994) #25 glg1b (ENSPREG00000018842) pacsin3 (ENSPREG00000018797) ero1a (ENSPREG00000018741) ENSPREG00000018709 ENSPREG00000018696 SAMD4A (ENSPREG00000018648) gch1 (ENSPREG00000018570) wdhd1 (ENSPREG00000018533) socs4 (ENSPREG00000018515) tnni2b.1 (ENSPREG00000018498) aph1b (ENSPREG00000018474) ENSPREG00000018462 myod1 (ENSPREG00000018453) Platyfish MODERN SPECIES 18 prmt3 (ENSXMAG00000010154) htatip2 (ENSXMAG00000010179) dbx1a (ENSXMAG00000010186) NAV2 (ENSXMAG00000010189) ENSXMAG00000024557 e2f8 (ENSXMAG00000010237) csrp3 (ENSXMAG00000027973) zdhhc13 (ENSXMAG00000010253) mpped2a (ENSXMAG00000010273) ENSXMAG00000019869 ENSXMAG00000010292 NR2E3 (ENSXMAG00000010311) ENSXMAG00000027678 ENSXMAG00000029990 slc22a18 (ENSXMAG00000010324) HACD3 (ENSXMAG00000010327) #22 SLC24A1 (ENSXMAG00000010371) #24 dennd4a (ENSXMAG00000010376) #25 glg1b (ENSXMAG00000010415) pacsin3 (ENSXMAG00000022122) ero1a (ENSXMAG00000029457) ENSXMAG00000023464 SAMD4A (ENSXMAG00000009864) gch1 (ENSXMAG00000009846) wdhd1 (ENSXMAG00000009823) socs4 (ENSXMAG00000020189) tnni2b.1 (ENSXMAG00000009816) aph1b (ENSXMAG00000009804) OTOG (ENSXMAG00000009782) myod1 (ENSXMAG00000009780) TNNT3 (ENSXMAG00000027991) Ovalentaria_B ANCESTRAL SPECIES 10 ENSGT00940000154963 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT01030000234990 Cichlidae ANCESTRAL SPECIES 11 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT01030000234990 Pseudocrenilabrinae ANCESTRAL SPECIES 13 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT01030000234990 Pseudocrenilabrinae_A ANCESTRAL SPECIES 32 ENSGT00390000010652.C ENSGT00940000160456 ENSGT01030000234623.a.b.b ENSGT00390000008502 ENSGT00690000102225 ENSGT00390000011608 ENSGT00940000156813 ENSGT00390000009453.fb.b ENSGT00390000014065 ENSGT00390000017480 ENSGT00940000161832.a ENSGT00940000161051.a.a.b.a.o.b ENSGT00940000163716.c.b.b ENSGT00390000002200.a.a ENSGT00940000162993 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Haplochromini ANCESTRAL SPECIES 34 ENSGT00390000010652.C ENSGT00940000160456 ENSGT01030000234623.a.b.b ENSGT00390000008502 ENSGT00690000102225 ENSGT00390000011608 ENSGT00940000156813 ENSGT00390000009453.fb.b ENSGT00390000014065 ENSGT00390000017480 ENSGT00940000161832.a ENSGT00940000163716.c.b.a ENSGT00940000163716.c.b.b ENSGT00390000002200.a.a ENSGT00940000162993 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030.o ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Haplochromini_A ANCESTRAL SPECIES 39 ENSGT00390000010652.C ENSGT00940000160456 ENSGT01030000234623.a.b.b ENSGT00390000008502 ENSGT00690000102225 ENSGT00390000011608 ENSGT00940000156813 ENSGT00390000009453.fb.b ENSGT00390000014065 ENSGT00390000017480 ENSGT00940000161832.a ENSGT00940000163716.c.b.a ENSGT00940000163716.c.b.b ENSGT00390000002200.a.a ENSGT00940000162993 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030.o ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Haplochromini_B ANCESTRAL SPECIES 56 ENSGT00390000010652.C ENSGT00940000160456 ENSGT01030000234623.a.b.b ENSGT00390000008502 ENSGT00690000102225 ENSGT00390000011608 ENSGT00940000156813 ENSGT00390000009453.fb.b ENSGT00390000014065 ENSGT00390000017480 ENSGT00940000161832.a ENSGT00940000161051.a.a.b.a.o.b ENSGT01020000230593.B.a.a.b.a ENSGT00390000002200.a.a ENSGT00940000162993 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202.c ENSGT00390000002030.o ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Zebra mbuna MODERN SPECIES 1091 CRTC3 (ENSMZEG00005015859) ENSMZEG00005015848 SERINC4 (ENSMZEG00005015840) hypk (ENSMZEG00005015834) mfap1 (ENSMZEG00005015824) hddc3 (ENSMZEG00005015810) vps33b (ENSMZEG00005015795) prc1b (ENSMZEG00005015741) ptpmt1 (ENSMZEG00005015728) ndufs3 (ENSMZEG00005015705) c1qtnf4 (ENSMZEG00005015697) ENSMZEG00005015677 ENSMZEG00005015666 atp6v0d1 (ENSMZEG00005015650) foxr1 (ENSMZEG00005015635) HACD3 (ENSMZEG00005015600) #22 SLC24A1 (ENSMZEG00005015586) #24 dennd4a (ENSMZEG00005015311) #25 socs4 (ENSMZEG00005015254) wdhd1 (ENSMZEG00005015228) gch1 (ENSMZEG00005015209) SAMD4A (ENSMZEG00005015188) ero1a (ENSMZEG00005015175) pacsin3 (ENSMZEG00005015162) glg1b (ENSMZEG00005015115) TNNI2 (ENSMZEG00005015093) aph1b (ENSMZEG00005015081) OTOG (ENSMZEG00005015041) myod1 (ENSMZEG00005015006) TNNT3 (ENSMZEG00005014820) ENSMZEG00005014810 Eastern happy MODERN SPECIES hypk (ENSACLG00000008131) mfap1 (ENSACLG00000008137) hddc3 (ENSACLG00000008144) vps33b (ENSACLG00000008153) prc1b (ENSACLG00000008191) ptpmt1 (ENSACLG00000008728) ndufs3 (ENSACLG00000008735) c1qtnf4 (ENSACLG00000008747) ENSACLG00000008749 ENSACLG00000008751 ENSACLG00000008756 atp6v0d1 (ENSACLG00000008763) foxr1 (ENSACLG00000008771) ENSACLG00000008774 ENSACLG00000008777 HACD3 (ENSACLG00000008783) #22 SLC24A1 (ENSACLG00000008823) #24 ENSACLG00000008842 dennd4a (ENSACLG00000008854) #25 socs4 (ENSACLG00000009024) wdhd1 (ENSACLG00000009036) gch1 (ENSACLG00000009069) SAMD4A (ENSACLG00000009089) ero1a (ENSACLG00000009207) pacsin3 (ENSACLG00000009240) glg1b (ENSACLG00000009342) tnni2b.1 (ENSACLG00000009427) aph1b (ENSACLG00000009435) OTOG (ENSACLG00000009449) myod1 (ENSACLG00000009487) TNNT3 (ENSACLG00000009498) Burton s mouthbrooder MODERN SPECIES 684 HACD3 (ENSHBUG00000016439) #22 SLC24A1 (ENSHBUG00000016373) #24 dennd4a (ENSHBUG00000016303) #25 socs4 (ENSHBUG00000015873) ENSHBUG00000015846 SAMD4A (ENSHBUG00000015778) gch1 (ENSHBUG00000015632) ero1a (ENSHBUG00000015614) pacsin3 (ENSHBUG00000015595) glg1b (ENSHBUG00000015542) ENSHBUG00000015470 aph1b (ENSHBUG00000015397) OTOG (ENSHBUG00000015356) myod1 (ENSHBUG00000015165) TNNT3 (ENSHBUG00000015184) ENSHBUG00000015145 Lyretail cichlid MODERN SPECIES 412 ENSNBRG00000010692 ENSNBRG00000010669 ENSNBRG00000010640 SERINC4 (ENSNBRG00000010630) hypk (ENSNBRG00000010623) mfap1 (ENSNBRG00000010598) hddc3 (ENSNBRG00000010585) ENSNBRG00000010576 prc1b (ENSNBRG00000010539) ptpmt1 (ENSNBRG00000010529) ndufs3 (ENSNBRG00000010499) c1qtnf4 (ENSNBRG00000010484) ENSNBRG00000010454 atp6v0d1 (ENSNBRG00000010437) ENSNBRG00000010426 HACD3 (ENSNBRG00000010400) #22 SLC24A1 (ENSNBRG00000010383) #24 ENSNBRG00000010370 #25 socs4 (ENSNBRG00000010334) wdhd1 (ENSNBRG00000010071) gch1 (ENSNBRG00000010039) SAMD4A (ENSNBRG00000009997) ero1a (ENSNBRG00000009955) pacsin3 (ENSNBRG00000009877) glg1b (ENSNBRG00000009842) ENSNBRG00000009822 aph1b (ENSNBRG00000009791) OTOG (ENSNBRG00000009698) myod1 (ENSNBRG00000009675) TNNT3 (ENSNBRG00000009613) ENSNBRG00000009599 Nile tilapia MODERN SPECIES uqcrfs1 (ENSONIG00000010416) rasl12 (ENSONIG00000034413) #12 KBTBD13 (ENSONIG00000020976) #13 UBAP1L (ENSONIG00000031699) #14 pdcd7 (ENSONIG00000032653) #15 dbx1a (ENSONIG00000007144) NAV2 (ENSONIG00000007138) e2f8 (ENSONIG00000007135) csrp3 (ENSONIG00000007132) zdhhc13 (ENSONIG00000007127) mpped2a (ENSONIG00000007125) ENSONIG00000007124 ENSONIG00000007114 NR2E3 (ENSONIG00000007109) slc22a18 (ENSONIG00000007107) HACD3 (ENSONIG00000007103) #22 SLC24A1 (ENSONIG00000007099) #24 ENSONIG00000042264 dennd4a (ENSONIG00000007087) #25 socs4 (ENSONIG00000020753) wdhd1 (ENSONIG00000007084) gch1 (ENSONIG00000007079) SAMD4A (ENSONIG00000007076) ero1a (ENSONIG00000007063) ENSONIG00000030911 A3GALT2 (ENSONIG00000039724) A3GALT2 (ENSONIG00000028428) ENSONIG00000034309 A3GALT2 (ENSONIG00000028598) A3GALT2 (ENSONIG00000039361) ENSONIG00000007167 Midas cichlid MODERN SPECIES 964 HACD3 (ENSACIG00000021659) #22 SLC24A1 (ENSACIG00000021640) #24 dennd4a (ENSACIG00000021585) #25 socs4 (ENSACIG00000021569) wdhd1 (ENSACIG00000021530) gch1 (ENSACIG00000021478) SAMD4A (ENSACIG00000021444) ero1a (ENSACIG00000021417) pacsin3 (ENSACIG00000021397) glg1b (ENSACIG00000021354) TNNI2 (ENSACIG00000021349) Pomacentridae ANCESTRAL SPECIES 15 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a.p ENSGT00390000007681.b.a.a.o ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Pomacentridae_A ANCESTRAL SPECIES 66 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a.p ENSGT00390000007681.b.a.a.o ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b Amphiprion ANCESTRAL SPECIES 42 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00940000177702.a.a ENSGT00390000007681.b.a.a.o ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT00390000002200.a.a ENSGT00940000162993 ENSGT00940000163460.a.a.a.a ENSGT00980000199380.a.b ENSGT00960000186692 ENSGT00940000158477.a.a Clown anemonefish MODERN SPECIES 1463 ttll3 (ENSAOCG00000017591) BHLHE40 (ENSAOCG00000017607) ITPR1 (ENSAOCG00000017775) sumf1 (ENSAOCG00000017802) ENSAOCG00000017812 NR2E3 (ENSAOCG00000017874) slc22a18 (ENSAOCG00000001258) HACD3 (ENSAOCG00000017961) #22 SLC24A1 (ENSAOCG00000001271) #24 dennd4a (ENSAOCG00000018094) #25 socs4 (ENSAOCG00000001283) wdhd1 (ENSAOCG00000018123) gch1 (ENSAOCG00000018136) Orange clownfish MODERN SPECIES slc6a5 (ENSAPEG00000000138) prmt3 (ENSAPEG00000000139) htatip2 (ENSAPEG00000000140) dbx1a (ENSAPEG00000000141) NAV2 (ENSAPEG00000000142) ENSAPEG00000000143 e2f8 (ENSAPEG00000000144) csrp3 (ENSAPEG00000000145) zdhhc13 (ENSAPEG00000000146) ENSAPEG00000000147 mpped2a (ENSAPEG00000000148) ENSAPEG00000000149 ENSAPEG00000000150 NR2E3 (ENSAPEG00000000151) slc22a18 (ENSAPEG00000000152) HACD3 (ENSAPEG00000000153) #22 SLC24A1 (ENSAPEG00000000154) #24 dennd4a (ENSAPEG00000000155) #25 socs4 (ENSAPEG00000000156) wdhd1 (ENSAPEG00000000157) gch1 (ENSAPEG00000000158) SAMD4A (ENSAPEG00000000159) ero1a (ENSAPEG00000000160) pacsin3 (ENSAPEG00000000161) ENSAPEG00000000162 glg1b (ENSAPEG00000000163) atp6v0d1 (ENSAPEG00000000164) foxr1 (ENSAPEG00000000165) ENSAPEG00000000166 ENSAPEG00000000167 ENSAPEG00000000168 Spiny chromis MODERN SPECIES 475 ENSAPOG00000001388 ENSAPOG00000001400 NR2E3 (ENSAPOG00000001413) slc22a18 (ENSAPOG00000001425) HACD3 (ENSAPOG00000001430) #22 SLC24A1 (ENSAPOG00000001442) #24 dennd4a (ENSAPOG00000001522) #25 ENSAPOG00000001540 socs4 (ENSAPOG00000001542) wdhd1 (ENSAPOG00000001560) gch1 (ENSAPOG00000001570) SAMD4A (ENSAPOG00000001579) ero1a (ENSAPOG00000001586) pacsin3 (ENSAPOG00000001600) Bicolor damselfish MODERN SPECIES 1231 mpped2a (ENSSPAG00000017134) ENSSPAG00000017142 ENSSPAG00000017160 NR2E3 (ENSSPAG00000017198) NR2E3 (ENSSPAG00000017228) slc22a18 (ENSSPAG00000017246) HACD3 (ENSSPAG00000017283) #22 ENSSPAG00000017319 #24 Percomorphaceae_C ANCESTRAL SPECIES 11 ENSGT00940000163467.a.b.b.a.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Eupercaria ANCESTRAL SPECIES 14 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Tetraodontidae ANCESTRAL SPECIES 4 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Fugu MODERN SPECIES 4 ENSTRUG00000020682 NELL1 (ENSTRUG00000016017) slc6a5 (ENSTRUG00000015944) prmt3 (ENSTRUG00000015904) htatip2 (ENSTRUG00000015893) dbx1a (ENSTRUG00000015886) NAV2 (ENSTRUG00000027383) e2f8 (ENSTRUG00000015792) csrp3 (ENSTRUG00000015766) zdhhc13 (ENSTRUG00000015707) mpped2a (ENSTRUG00000015686) ENSTRUG00000020949 ENSTRUG00000015637 NR2E3 (ENSTRUG00000015582) slc22a18 (ENSTRUG00000015561) HACD3 (ENSTRUG00000015510) #22 SLC24A1 (ENSTRUG00000015482) #24 dennd4a (ENSTRUG00000015436) #25 socs4 (ENSTRUG00000015433) wdhd1 (ENSTRUG00000015390) gch1 (ENSTRUG00000015367) SAMD4A (ENSTRUG00000015288) ero1a (ENSTRUG00000015220) pacsin3 (ENSTRUG00000015184) glg1b (ENSTRUG00000015083) tnni2b.1 (ENSTRUG00000015041) aph1b (ENSTRUG00000014985) myod1 (ENSTRUG00000014891) TNNT3 (ENSTRUG00000014861) ENSTRUG00000021513 ENSTRUG00000031897 Tetraodon MODERN SPECIES 20 ENSTNIG00000000788 lrp4 (ENSTNIG00000009608) NELL1 (ENSTNIG00000009609) slc6a5 (ENSTNIG00000009610) prmt3 (ENSTNIG00000009611) htatip2 (ENSTNIG00000009612) dbx1a (ENSTNIG00000009613) NAV2 (ENSTNIG00000009614) e2f8 (ENSTNIG00000009615) csrp3 (ENSTNIG00000009616) zdhhc13 (ENSTNIG00000002121) mpped2a (ENSTNIG00000005247) ENSTNIG00000005152 ENSTNIG00000005151 NR2E3 (ENSTNIG00000005150) HACD3 (ENSTNIG00000001644) #22 SLC24A1 (ENSTNIG00000018806) #24 dennd4a (ENSTNIG00000018805) #25 socs4 (ENSTNIG00000002432) wdhd1 (ENSTNIG00000018803) gch1 (ENSTNIG00000018802) SAMD4A (ENSTNIG00000018801) ero1a (ENSTNIG00000018800) pacsin3 (ENSTNIG00000018799) glg1b (ENSTNIG00000018797) tnni2b.1 (ENSTNIG00000018796) aph1b (ENSTNIG00000018795) OTOG (ENSTNIG00000018794) myod1 (ENSTNIG00000018793) TNNT3 (ENSTNIG00000018792) ENSTNIG00000018791 Eupecaria_A ANCESTRAL SPECIES 15 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Ballan wrasse MODERN SPECIES 142 ENSLBEG00000024342 ENSLBEG00000024389 NR2E3 (ENSLBEG00000024468) slc22a18 (ENSLBEG00000024489) HACD3 (ENSLBEG00000024570) #22 SLC24A1 (ENSLBEG00000024638) #24 dennd4a (ENSLBEG00000024700) #25 socs4 (ENSLBEG00000024771) wdhd1 (ENSLBEG00000024847) gch1 (ENSLBEG00000024950) SAMD4A (ENSLBEG00000025062) ero1a (ENSLBEG00000025153) pacsin3 (ENSLBEG00000025230) glg1b (ENSLBEG00000025302) tnni2b.1 (ENSLBEG00000025369) aph1b (ENSLBEG00000025401) ENSLBEG00000025428 ENSLBEG00000025444 ENSLBEG00000025461 myod1 (ENSLBEG00000025479) Eupecaria_B ANCESTRAL SPECIES 15 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Eupecaria_C ANCESTRAL SPECIES 11 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Gilthead seabream MODERN SPECIES 18 ENSSAUG00010010809 ENSSAUG00010010810 slc6a5 (ENSSAUG00010010819) prmt3 (ENSSAUG00010011691) htatip2 (ENSSAUG00010011716) dbx1a (ENSSAUG00010011720) NAV2 (ENSSAUG00010011732) e2f8 (ENSSAUG00010011743) csrp3 (ENSSAUG00010011751) zdhhc13 (ENSSAUG00010011756) mpped2a (ENSSAUG00010011765) ENSSAUG00010011775 ENSSAUG00010011783 NR2E3 (ENSSAUG00010011796) slc22a18 (ENSSAUG00010011801) HACD3 (ENSSAUG00010011805) #22 SLC24A1 (ENSSAUG00010011812) #24 dennd4a (ENSSAUG00010011836) #25 GFUS (ENSSAUG00010012034) socs4 (ENSSAUG00010012526) wdhd1 (ENSSAUG00010012535) gch1 (ENSSAUG00010012542) SAMD4A (ENSSAUG00010012545) ero1a (ENSSAUG00010012573) pacsin3 (ENSSAUG00010012825) glg1b (ENSSAUG00010012845) TNNI2 (ENSSAUG00010012899) aph1b (ENSSAUG00010012901) myod1 (ENSSAUG00010012905) TNNT3 (ENSSAUG00010012907) ENSSAUG00010012908 Eupercaria_incertae_sedis ANCESTRAL SPECIES 7 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a European seabass MODERN SPECIES 18 ENSDLAG00005012301 slc6a5 (ENSDLAG00005012316) prmt3 (ENSDLAG00005012846) htatip2 (ENSDLAG00005012965) dbx1a (ENSDLAG00005012977) NAV2 (ENSDLAG00005013065) e2f8 (ENSDLAG00005015998) csrp3 (ENSDLAG00005032855) zdhhc13 (ENSDLAG00005016050) mpped2a (ENSDLAG00005017487) ENSDLAG00005026438 ENSDLAG00005031744 ENSDLAG00005017548 ENSDLAG00005017617 ENSDLAG00005030198 HACD3 (ENSDLAG00005032938) #22 SLC24A1 (ENSDLAG00005029857) #24 DENND4A (ENSDLAG00005017811) #25 socs4 (ENSDLAG00005031594) wdhd1 (ENSDLAG00005018377) gch1 (ENSDLAG00005031132) SAMD4A (ENSDLAG00005018542) ero1a (ENSDLAG00005018493) ENSDLAG00005018657 ENSDLAG00005018712 ENSDLAG00005019543 ENSDLAG00005026766 ENSDLAG00005019564 ENSDLAG00005034786 ENSDLAG00005019645 ENSDLAG00005019721 Large yellow croaker MODERN SPECIES 480 zgc:194679 (ENSLCRG00005019441) zgc:194679 (ENSLCRG00005019443) ENSLCRG00005019444 htatip2 (ENSLCRG00005019446) dbx1a (ENSLCRG00005019448) NAV2 (ENSLCRG00005019450) ENSLCRG00005019452 e2f8 (ENSLCRG00005002371) zdhhc13 (ENSLCRG00005002405) csrp3 (ENSLCRG00005002604) mpped2a (ENSLCRG00005002608) ENSLCRG00005002609 ENSLCRG00005002613 NR2E3 (ENSLCRG00005002635) slc22a18 (ENSLCRG00005002671) HACD3 (ENSLCRG00005002710) #22 SLC24A1 (ENSLCRG00005002811) #24 dennd4a (ENSLCRG00005002845) #25 socs4 (ENSLCRG00005002924) gch1 (ENSLCRG00005002929) SAMD4A (ENSLCRG00005002932) ero1a (ENSLCRG00005002944) pacsin3 (ENSLCRG00005002960) glg1b (ENSLCRG00005002969) tnni2b.1 (ENSLCRG00005003007) aph1b (ENSLCRG00005003009) aph1b (ENSLCRG00005003014) OTOG (ENSLCRG00005003017) nqo1 (ENSLCRG00005003029) ENSLCRG00005003039 ENSLCRG00005003042 Perciformes ANCESTRAL SPECIES 15 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Cottioidei ANCESTRAL SPECIES 13 ENSGT00940000158287 ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00390000006548.a.a ENSGT00940000155628 ENSGT00940000155889.c ENSGT00940000156684 ENSGT00940000158166 ENSGT00940000156476.g ENSGT00940000154905.i.a ENSGT00390000014038 ENSGT00940000159572.a.a ENSGT00390000008748.b.g.b ENSGT00390000005300 ENSGT00940000154617.B.c ENSGT00400000022240 ENSGT00940000157859.a.a Lumpfish MODERN SPECIES 18 ENSCLMG00005000542 NELL1 (ENSCLMG00005000055) slc6a5 (ENSCLMG00005022683) prmt3 (ENSCLMG00005022681) htatip2 (ENSCLMG00005022680) dbx1a (ENSCLMG00005022679) NAV2 (ENSCLMG00005022639) e2f8 (ENSCLMG00005022617) csrp3 (ENSCLMG00005022611) zdhhc13 (ENSCLMG00005022516) mpped2a (ENSCLMG00005022511) ENSCLMG00005022510 ENSCLMG00005022507 NR2E3 (ENSCLMG00005022505) slc22a18 (ENSCLMG00005022504) HACD3 (ENSCLMG00005022503) #22 SLC24A1 (ENSCLMG00005022502) #24 rps17 (ENSCLMG00005022501) csnk1g1 (ENSCLMG00005022489) SNX1 (ENSCLMG00005022487) neo1a (ENSCLMG00005021604) bbs4 (ENSCLMG00005021449) scamp2l (ENSCLMG00005021422) myo9aa (ENSCLMG00005021366) senp8 (ENSCLMG00005021352) znf609b (ENSCLMG00005021349) trip4 (ENSCLMG00005021348) chrna7a (ENSCLMG00005021344) ENSCLMG00005021343 calml4a (ENSCLMG00005021342) ADAMTS7 (ENSCLMG00005021336) Stickleback MODERN SPECIES 1 A3GALT2 (ENSGACG00000017105) lrp4 (ENSGACG00000017100) NELL1 (ENSGACG00000017098) slc6a5 (ENSGACG00000017096) prmt3 (ENSGACG00000017094) htatip2 (ENSGACG00000017092) NAV2 (ENSGACG00000017087) e2f8 (ENSGACG00000017086) csrp3 (ENSGACG00000017082) zdhhc13 (ENSGACG00000017075) mpped2a (ENSGACG00000017073) ENSGACG00000017072 ENSGACG00000017063 NR2E3 (ENSGACG00000017060) slc22a18 (ENSGACG00000017056) HACD3 (ENSGACG00000017047) #22 SLC24A1 (ENSGACG00000017046) #24 rps17 (ENSGACG00000017042) csnk1g1 (ENSGACG00000017038) SNX1 (ENSGACG00000017034) neo1a (ENSGACG00000017030) bbs4 (ENSGACG00000017021) scamp2l (ENSGACG00000017012) myo9aa (ENSGACG00000017000) senp8 (ENSGACG00000016997) GRAMD2A (ENSGACG00000016994) znf609b (ENSGACG00000016992) trip4 (ENSGACG00000016986) chrna7a (ENSGACG00000016966) cln6a (ENSGACG00000016961) calml4a (ENSGACG00000016957) Perciformes_a ANCESTRAL SPECIES 13 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Pike perch MODERN SPECIES 42 ENSSLUG00000012834 slc6a5 (ENSSLUG00000012844) prmt3 (ENSSLUG00000012890) ENSSLUG00000013285 htatip2 (ENSSLUG00000013292) dbx1a (ENSSLUG00000013296) e2f8 (ENSSLUG00000013361) csrp3 (ENSSLUG00000013375) zdhhc13 (ENSSLUG00000013411) slc18b1 (ENSSLUG00000014147) mpped2a (ENSSLUG00000014219) ENSSLUG00000014232 ENSSLUG00000014234 NR2E3 (ENSSLUG00000014245) slc22a18 (ENSSLUG00000014266) HACD3 (ENSSLUG00000014295) #22 SLC24A1 (ENSSLUG00000014312) #24 dennd4a (ENSSLUG00000014340) #25 socs4 (ENSSLUG00000014357) wdhd1 (ENSSLUG00000014371) gch1 (ENSSLUG00000014411) SAMD4A (ENSSLUG00000014423) ero1a (ENSSLUG00000014452) pacsin3 (ENSSLUG00000014868) glg1b (ENSSLUG00000014927) tnni2b.1 (ENSSLUG00000015288) aph1b (ENSSLUG00000015292) OTOG (ENSSLUG00000015304) myod1 (ENSSLUG00000015360) TNNT3 (ENSSLUG00000015377) ENSSLUG00000015385 Channel bull blenny MODERN SPECIES 17 ENSCGOG00000001259 slc6a5 (ENSCGOG00000001258) prmt3 (ENSCGOG00000001228) htatip2 (ENSCGOG00000001220) dbx1a (ENSCGOG00000001219) ENSCGOG00000001218 NAV2 (ENSCGOG00000001167) e2f8 (ENSCGOG00000001160) csrp3 (ENSCGOG00000001159) zdhhc13 (ENSCGOG00000001121) mpped2a (ENSCGOG00000001116) ENSCGOG00000001115 ENSCGOG00000001114 NR2E3 (ENSCGOG00000001111) slc22a18 (ENSCGOG00000001108) HACD3 (ENSCGOG00000001094) #22 SLC24A1 (ENSCGOG00000001085) #24 dennd4a (ENSCGOG00000000880) #25 socs4 (ENSCGOG00000000851) wdhd1 (ENSCGOG00000000697) gch1 (ENSCGOG00000000646) SAMD4A (ENSCGOG00000000470) ero1a (ENSCGOG00000000411) pacsin3 (ENSCGOG00000000368) glg1b (ENSCGOG00000000287) tnni2b.1 (ENSCGOG00000000244) aph1b (ENSCGOG00000000232) OTOG (ENSCGOG00000000174) myod1 (ENSCGOG00000000126) TNNT3 (ENSCGOG00000000102) ENSCGOG00000000089 Percomorphaceae_D ANCESTRAL SPECIES 11 ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Anabantaria ANCESTRAL SPECIES 11 ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568.l ENSGT00390000017790 ENSGT00390000006347.a Anabantoidei ANCESTRAL SPECIES 8 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568.l ENSGT00390000017790 ENSGT00390000006347.a Climbing perch MODERN SPECIES 16 ENSATEG00000021458 NELL1 (ENSATEG00000021543) ENSATEG00000021560 slc6a5 (ENSATEG00000021586) prmt3 (ENSATEG00000021598) htatip2 (ENSATEG00000021609) dbx1a (ENSATEG00000021616) NAV2 (ENSATEG00000021634) csrp3 (ENSATEG00000021724) zdhhc13 (ENSATEG00000021742) mpped2a (ENSATEG00000021765) ENSATEG00000021774 ENSATEG00000021798 ENSATEG00000021837 ENSATEG00000021851 HACD3 (ENSATEG00000021866) #22 SLC24A1 (ENSATEG00000021887) #24 DENND4A (ENSATEG00000021908) #25 socs4 (ENSATEG00000021970) wdhd1 (ENSATEG00000021986) gch1 (ENSATEG00000022027) SAMD4A (ENSATEG00000022040) ero1a (ENSATEG00000022081) ENSATEG00000022101 ENSATEG00000022132 ENSATEG00000022204 ENSATEG00000022233 ENSATEG00000022248 ENSATEG00000022262 ENSATEG00000022291 ENSATEG00000022355 Zig-zag eel MODERN SPECIES 17 NELL1 (ENSMAMG00000015789) slc6a5 (ENSMAMG00000015848) prmt3 (ENSMAMG00000015896) htatip2 (ENSMAMG00000015926) dbx1a (ENSMAMG00000015940) ENSMAMG00000016183 NAV2 (ENSMAMG00000015959) e2f8 (ENSMAMG00000016200) csrp3 (ENSMAMG00000016232) zdhhc13 (ENSMAMG00000016250) mpped2a (ENSMAMG00000016266) ENSMAMG00000026458 ENSMAMG00000016336 ENSMAMG00000016434 ENSMAMG00000016453 HACD3 (ENSMAMG00000016477) #22 SLC24A1 (ENSMAMG00000016511) #24 DENND4A (ENSMAMG00000016577) #25 socs4 (ENSMAMG00000016740) wdhd1 (ENSMAMG00000016742) gch1 (ENSMAMG00000016761) SAMD4A (ENSMAMG00000016799) ero1a (ENSMAMG00000016859) ENSMAMG00000016868 ENSMAMG00000016896 TNNI2 (ENSMAMG00000027039) ENSMAMG00000016992 ENSMAMG00000017001 ENSMAMG00000017043 ENSMAMG00000017073 ENSMAMG00000017121 Carangaria ANCESTRAL SPECIES 11 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Carangaria_A ANCESTRAL SPECIES 19 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Seriola ANCESTRAL SPECIES 30 ENSGT00940000158287 ENSGT00940000163467.a.b.b.a.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Greater amberjack MODERN SPECIES 3 ENSSDUG00000015986 ENSSDUG00000015990 slc6a5 (ENSSDUG00000016016) prmt3 (ENSSDUG00000016148) htatip2 (ENSSDUG00000016210) dbx1a (ENSSDUG00000016225) NAV2 (ENSSDUG00000016252) e2f8 (ENSSDUG00000016327) csrp3 (ENSSDUG00000016350) zdhhc13 (ENSSDUG00000016374) mpped2a (ENSSDUG00000016439) ENSSDUG00000016457 ENSSDUG00000016485 NR2E3 (ENSSDUG00000016573) slc22a18 (ENSSDUG00000016604) HACD3 (ENSSDUG00000016623) #22 SLC24A1 (ENSSDUG00000016668) #24 dennd4a (ENSSDUG00000016708) #25 socs4 (ENSSDUG00000016907) wdhd1 (ENSSDUG00000016996) gch1 (ENSSDUG00000017494) SAMD4A (ENSSDUG00000017510) ENSSDUG00000017549 ero1a (ENSSDUG00000017566) pacsin3 (ENSSDUG00000017630) glg1b (ENSSDUG00000017681) ENSSDUG00000017775 aph1b (ENSSDUG00000017793) OTOG (ENSSDUG00000017868) myod1 (ENSSDUG00000018276) TNNT3 (ENSSDUG00000018283) Yellowtail amberjack MODERN SPECIES 2727 ENSSLDG00000010099 ENSSLDG00000010070 e2f8 (ENSSLDG00000010036) csrp3 (ENSSLDG00000009998) zdhhc13 (ENSSLDG00000009964) mpped2a (ENSSLDG00000009935) ENSSLDG00000009928 ENSSLDG00000009903 NR2E3 (ENSSLDG00000009890) slc22a18 (ENSSLDG00000009860) HACD3 (ENSSLDG00000009809) #22 SLC24A1 (ENSSLDG00000009764) #24 Barramundi perch MODERN SPECIES 96 NELL1 (ENSLCAG00010017942) slc6a5 (ENSLCAG00010017918) prmt3 (ENSLCAG00010017909) htatip2 (ENSLCAG00010017906) dbx1a (ENSLCAG00010017904) ENSLCAG00010017900 NAV2 (ENSLCAG00010017798) e2f8 (ENSLCAG00010017767) csrp3 (ENSLCAG00010017763) zdhhc13 (ENSLCAG00010017744) mpped2a (ENSLCAG00010017716) ENSLCAG00010017710 ENSLCAG00010017694 NR2E3 (ENSLCAG00010017688) slc22a18 (ENSLCAG00010017678) HACD3 (ENSLCAG00010017676) #22 SLC24A1 (ENSLCAG00010017673) #24 dennd4a (ENSLCAG00010017670) #25 socs4 (ENSLCAG00010017668) wdhd1 (ENSLCAG00010017654) gch1 (ENSLCAG00010017650) SAMD4A (ENSLCAG00010017642) ero1a (ENSLCAG00010017638) pacsin3 (ENSLCAG00010017636) glg1b (ENSLCAG00010017596) tnni2b.1 (ENSLCAG00010017526) aph1b (ENSLCAG00010017523) OTOG (ENSLCAG00010017486) myod1 (ENSLCAG00010017465) TNNT3 (ENSLCAG00010017455) ENSLCAG00010017452 Pleuronectoidei ANCESTRAL SPECIES 39 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Tongue sole MODERN SPECIES 20 NELL1 (ENSCSEG00000019419) slc6a5 (ENSCSEG00000019410) prmt3 (ENSCSEG00000019404) htatip2 (ENSCSEG00000019402) dbx1a (ENSCSEG00000019398) ENSCSEG00000019395 NAV2 (ENSCSEG00000019359) e2f8 (ENSCSEG00000019335) csrp3 (ENSCSEG00000019333) zdhhc13 (ENSCSEG00000019323) mpped2a (ENSCSEG00000019316) ENSCSEG00000019314 ENSCSEG00000019294 NR2E3 (ENSCSEG00000019282) slc22a18 (ENSCSEG00000019279) HACD3 (ENSCSEG00000019267) #22 SLC24A1 (ENSCSEG00000019249) #24 dennd4a (ENSCSEG00000019190) #25 socs4 (ENSCSEG00000019179) lipca (ENSCSEG00000019171) aqp9b (ENSCSEG00000019167) aldh1a2 (ENSCSEG00000019151) polr2m (ENSCSEG00000019146) ENSCSEG00000019136 CGNL1 (ENSCSEG00000019127) TCF12 (ENSCSEG00000019074) ENSCSEG00000018996 ENSCSEG00000018989 tex9 (ENSCSEG00000018980) ENSCSEG00000018971 nedd4a (ENSCSEG00000018946) Turbot MODERN SPECIES 17 NELL1 (ENSSMAG00000008339) slc6a5 (ENSSMAG00000008312) prmt3 (ENSSMAG00000008265) ENSSMAG00000008258 htatip2 (ENSSMAG00000008235) dbx1a (ENSSMAG00000023716) NAV2 (ENSSMAG00000008150) e2f8 (ENSSMAG00000008106) csrp3 (ENSSMAG00000008056) zdhhc13 (ENSSMAG00000008013) mpped2a (ENSSMAG00000033645) ENSSMAG00000007996 ENSSMAG00000007972 ENSSMAG00000007954 ENSSMAG00000007929 HACD3 (ENSSMAG00000007882) #22 SLC24A1 (ENSSMAG00000007857) #24 DENND4A (ENSSMAG00000007433) #25 wdhd1 (ENSSMAG00000007346) ENSSMAG00000034634 SAMD4A (ENSSMAG00000007254) ero1a (ENSSMAG00000007207) ENSSMAG00000007168 ENSSMAG00000006788 ENSSMAG00000006609 ENSSMAG00000006568 ENSSMAG00000027873 ENSSMAG00000006529 ENSSMAG00000006392 ENSSMAG00000006376 ENSSMAG00000006344 Pinecone sodierfish MODERN SPECIES 17 NELL1 (ENSMMDG00005000287) slc6a5 (ENSMMDG00005000196) prmt3 (ENSMMDG00005000132) htatip2 (ENSMMDG00005000108) dbx1a (ENSMMDG00005000101) ENSMMDG00005023868 NAV2 (ENSMMDG00005023843) e2f8 (ENSMMDG00005023830) csrp3 (ENSMMDG00005023826) zdhhc13 (ENSMMDG00005023737) mpped2a (ENSMMDG00005023721) ENSMMDG00005023717 ENSMMDG00005023712 NR2E3 (ENSMMDG00005023708) slc22a18 (ENSMMDG00005023705) HACD3 (ENSMMDG00005023685) #22 SLC24A1 (ENSMMDG00005023674) #24 dennd4a (ENSMMDG00005023619) #25 socs4 (ENSMMDG00005023589) wdhd1 (ENSMMDG00005023579) gch1 (ENSMMDG00005023576) SAMD4A (ENSMMDG00005023575) ero1a (ENSMMDG00005023412) pacsin3 (ENSMMDG00005023408) ENSMMDG00005023407 c1qtnf4 (ENSMMDG00005023405) ndufs3 (ENSMMDG00005023404) ENSMMDG00005023401 ENSMMDG00005023400 ndufs3 (ENSMMDG00005023382) ptpmt1 (ENSMMDG00005023376) Cod MODERN SPECIES 5 ENSGMOG00000009277 NELL1 (ENSGMOG00000031363) slc6a5 (ENSGMOG00000002626) prmt3 (ENSGMOG00000002570) htatip2 (ENSGMOG00000002550) dbx1a (ENSGMOG00000002488) ENSGMOG00000028982 e2f8 (ENSGMOG00000019253) csrp3 (ENSGMOG00000019248) zdhhc13 (ENSGMOG00000019229) mpped2a (ENSGMOG00000027425) ENSGMOG00000032770 ENSGMOG00000019198 ENSGMOG00000019194 ENSGMOG00000019185 HACD3 (ENSGMOG00000019175) #22 SLC24A1 (ENSGMOG00000026384) #24 DENND4A (ENSGMOG00000026888) #25 ENSGMOG00000027242 socs4 (ENSGMOG00000017366) wdhd1 (ENSGMOG00000017373) gch1 (ENSGMOG00000013855) SAMD4A (ENSGMOG00000010970) ero1a (ENSGMOG00000008393) ENSGMOG00000008409 ENSGMOG00000026469 c1qtnf4 (ENSGMOG00000029444) ENSGMOG00000003400 ptpmt1 (ENSGMOG00000029620) prc1b (ENSGMOG00000003427) vps33b (ENSGMOG00000003457) Otomorpha ANCESTRAL SPECIES 729 ENSGT00530000062962.b.a.e #22 ENSGT00940000160694.g.b ENSGT00530000063106.A.s.a.a ##28 Otophysi ANCESTRAL SPECIES 555 ENSGT00530000062962.b.a.e #22 ENSGT00940000160694.g.b ENSGT00530000063106.A.s.a.a ##28 Characiphysae ANCESTRAL SPECIES 131 ENSGT00390000004737.b.a ENSGT00550000074828.a ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00530000062962.b.a.e #22 ENSGT00940000160694.g.b ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a.e ENSGT00940000158136 ENSGT00390000005535 ENSGT00940000164949 ENSGT00950000182838.A.a.b ENSGT00940000156076.a.a.a.a.c ENSGT00940000163235.A.a.b ENSGT01040000240607 ENSGT00940000156076.a.a.a.a.d.b ENSGT00940000163235.A.a.a.b ENSGT00390000013104 ENSGT00390000013315 Channel catfish MODERN SPECIES 1 uchl5 (ENSIPUG00000017083) GLRX2 (ENSIPUG00000017204) B3GALT2 (ENSIPUG00000017220) cfhl1 (ENSIPUG00000017233) ENSIPUG00000017271 ENSIPUG00000017301 ENSIPUG00000017310 ENSIPUG00000017358 syt7b (ENSIPUG00000017371) sdhaf2 (ENSIPUG00000017397) CPSF7 (ENSIPUG00000017425) polr2l (ENSIPUG00000017431) ENSIPUG00000017455 DAGLA (ENSIPUG00000017462) arih1 (ENSIPUG00000017512) ENSIPUG00000017616 #22 helz2c (ENSIPUG00000017627) cmtr2 (ENSIPUG00000017648) calb2 (ENSIPUG00000017673) slc38a7 (ENSIPUG00000017796) MRPL21 (ENSIPUG00000017862) ENSIPUG00000017892 ap2a2 (ENSIPUG00000017908) ENSIPUG00000018000 ENSIPUG00000018032 ENSIPUG00000018228 ENSIPUG00000018239 ENSIPUG00000018257 tollip (ENSIPUG00000018263) slc35c1 (ENSIPUG00000018276) MAPK8IP1 (ENSIPUG00000018285) Characiphysae_b ANCESTRAL SPECIES 4 ENSGT00390000007252.d ENSGT00940000158143 ENSGT00940000164952 ENSGT00940000159206.b ENSGT01090000260005.a.b.b ENSGT00940000157398.i.a ENSGT00950000182841.b.a.b.a.b ENSGT00390000004737.b.a ENSGT00550000074828.a ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00530000062962.b.a.e #22 ENSGT00940000160694.g.b ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a.e ENSGT00940000158136 ENSGT00390000005535 ENSGT00940000164949 ENSGT00950000182838.A.a.b ENSGT00940000156076.a.a.a.a.c ENSGT00940000163235.A.a.b ENSGT01040000240607 ENSGT00940000156076.a.a.a.a.d.b ENSGT00940000163235.A.a.a.b ENSGT00390000013104 ENSGT00390000013315 Electric eel MODERN SPECIES 26 si:ch211-107o10.3 (ENSEEEG00000001145) ZNF710 (ENSEEEG00000001148) serf2a (ENSEEEG00000001149) katnb1 (ENSEEEG00000001158) tmem208 (ENSEEEG00000001232) si:ch211-122f10.4 (ENSEEEG00000001234) saa (ENSEEEG00000001235) rplp2l (ENSEEEG00000001238) ENSEEEG00000001239 syt7b (ENSEEEG00000001240) sdhaf2 (ENSEEEG00000001242) CPSF7 (ENSEEEG00000001243) polr2l (ENSEEEG00000001244) DAGLA (ENSEEEG00000001245) arih1l (ENSEEEG00000001248) HACD3 (ENSEEEG00000001258) #22 ENSEEEG00000001259 ddx42 (ENSEEEG00000001260) strada (ENSEEEG00000001262) rnf113a (ENSEEEG00000001278) ENSEEEG00000001294 snrnp70 (ENSEEEG00000001295) lin7b (ENSEEEG00000001296) zgc:193811 (ENSEEEG00000001308) kcnc3a (ENSEEEG00000001309) vat1 (ENSEEEG00000001311) ENSEEEG00000001312 asb16 (ENSEEEG00000001314) tmub2 (ENSEEEG00000001315) atxn7l3a (ENSEEEG00000001319) ubtf (ENSEEEG00000001321) Characoidei ANCESTRAL SPECIES 18 ENSGT00390000007252.d ENSGT00940000158143 ENSGT00940000164952 ENSGT00940000159206.b ENSGT01090000260005.a.b.b ENSGT00940000157398.i.a ENSGT00950000182841.b.a.b.a.b ENSGT00550000074828.a ENSGT00940000165631.g.a ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00530000062962.b.a.e #22 ENSGT00940000160694.g.b ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00940000158136 ENSGT00390000005535 ENSGT00940000164949 ENSGT00950000182838.A.a.b Red-bellied piranha MODERN SPECIES 318 lmnl3 (ENSPNAG00000015367) MARCHF3 (ENSPNAG00000015307) gjd6 (ENSPNAG00000015300) sh3gl3a (ENSPNAG00000015270) fth1b (ENSPNAG00000015208) rplp2l (ENSPNAG00000005552) ENSPNAG00000015186 syt7b (ENSPNAG00000015132) sdhaf2 (ENSPNAG00000015086) CPSF7 (ENSPNAG00000015073) polr2l (ENSPNAG00000015066) ENSPNAG00000003356 DAGLA (ENSPNAG00000015052) arih1l (ENSPNAG00000014999) HACD3 (ENSPNAG00000003323) #22 cmtr2 (ENSPNAG00000014909) ENSPNAG00000014889 calb2b (ENSPNAG00000014884) slc38a7 (ENSPNAG00000014864) mrpl21 (ENSPNAG00000003269) ENSPNAG00000014753 AP2A2 (ENSPNAG00000014739) ENSPNAG00000006463 ENSPNAG00000014669 Mexicana tetra MODERN SPECIES 20 ENSAMXG00000037407 ENSAMXG00000034021 ENSAMXG00000041219 ENSAMXG00000040339 ENSAMXG00000039930 rplp2l (ENSAMXG00000033872) ENSAMXG00000033663 ENSAMXG00000042767 syt7b (ENSAMXG00000003329) sdhaf2 (ENSAMXG00000042602) CPSF7 (ENSAMXG00000003296) polr2l (ENSAMXG00000037735) ENSAMXG00000039950 DAGLA (ENSAMXG00000003215) arih1l (ENSAMXG00000003152) ENSAMXG00000030657 #22 ENSAMXG00000040064 ENSAMXG00000031111 ENSAMXG00000043624 cmtr2 (ENSAMXG00000003128) calb2b (ENSAMXG00000036096) slc38a7 (ENSAMXG00000003059) mrpl21 (ENSAMXG00000036794) ENSAMXG00000031349 AP2A2 (ENSAMXG00000002953) abhd2a (ENSAMXG00000038834) rasl12 (ENSAMXG00000002924) #12 KBTBD13 (ENSAMXG00000025781) #13 UBAP1L (ENSAMXG00000042348) #14 pdcd7 (ENSAMXG00000002916) #15 clpxa (ENSAMXG00000002914) #16 Clupeiformes ANCESTRAL SPECIES 763 ENSGT00530000062962.b.a.e #22 ENSGT00940000160694.g.b ENSGT00530000063106.A.s.a.a ##28 Atlantic herring MODERN SPECIES 22 cplx3b (ENSCHAG00000009396) CSK (ENSCHAG00000009425) ENSCHAG00000010220 ENSCHAG00000010256 ##27 ENSCHAG00000010978 ENSCHAG00000011012 #24 ENSCHAG00000011181 ENSCHAG00000011208 #25 ENSCHAG00000011724 GNPAT (ENSCHAG00000011739) ENSCHAG00000011866 zmp:0000001138 (ENSCHAG00000011868) ENSCHAG00000011874 NR2E3 (ENSCHAG00000011882) arih1l (ENSCHAG00000011895) ENSCHAG00000012061 #22 ENSCHAG00000012141 ENSCHAG00000012180 ENSCHAG00000012229 ##28 ENSCHAG00000012262 ENSCHAG00000012284 ENSCHAG00000012323 ENSCHAG00000012353 rhcgl1 (ENSCHAG00000012389) fes (ENSCHAG00000012848) furina (ENSCHAG00000013140) ENSCHAG00000013331 ENSCHAG00000013747 ENSCHAG00000013828 ENSCHAG00000013851 slc39a1 (ENSCHAG00000013858) Clupeocephala ANCESTRAL SPECIES 2 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000155333.A.a ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #35 ENSGT00940000165890 ENSGT00940000158146.a #36 Otomorpha ANCESTRAL SPECIES ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Otophysi ANCESTRAL SPECIES 4 ENSGT00940000163703.b ENSGT00940000159811 ENSGT00940000158682 ENSGT00940000154837 ENSGT00530000063553.b.b ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b.i #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Characiphysae ANCESTRAL SPECIES 8 ENSGT00960000187150 ENSGT00940000159811 ENSGT00940000158682 ENSGT00940000154837 ENSGT00530000063553.b.b ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b.i #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Channel catfish MODERN SPECIES 23 cbln1 (ENSIPUG00000020331) ENSIPUG00000020342 n4bp1 (ENSIPUG00000020354) siah1 (ENSIPUG00000020372) lonp2 (ENSIPUG00000020393) il34 (ENSIPUG00000020427) sf3b3 (ENSIPUG00000020435) st3gal2 (ENSIPUG00000020529) aars (ENSIPUG00000020538) ENSIPUG00000020630 pllp (ENSIPUG00000020662) arl2bp (ENSIPUG00000020669) arih1 (ENSIPUG00000020676) c4h15orf39 (ENSIPUG00000021229) ppcdc (ENSIPUG00000021242) hacd3 (ENSIPUG00000021269) #22 vwa9 (ENSIPUG00000021289) #23 slc24a1 (ENSIPUG00000021316) #24 dennd4a (ENSIPUG00000021338) #25 Rab11a (ENSIPUG00000021401) #26 megf11 (ENSIPUG00000021414) ##27 map2k1 (ENSIPUG00000021471) #31 rpl4-b (ENSIPUG00000021502) #33 zwilch (ENSIPUG00000021572) #34 LCTL (ENSIPUG00000021616) #35 snapc5 (ENSIPUG00000021633) #32 SMAD6 (ENSIPUG00000021637) #36 smad3b (ENSIPUG00000021649) #37 AAGAB (ENSIPUG00000021694) iqch (ENSIPUG00000021716) c4h15orf61 (ENSIPUG00000021762) Characiphysae_b ANCESTRAL SPECIES 4 ENSGT00960000187150 ENSGT00940000159811 ENSGT00940000158682 ENSGT00940000154837 ENSGT00530000063553.b.b ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b.i #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Characoidei ANCESTRAL SPECIES 30 ENSGT00940000158492.b ENSGT00940000159811 ENSGT00940000158682 ENSGT00940000154837 ENSGT00530000063553.b.b ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b.i #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Red-bellied piranha MODERN SPECIES znf423 (ENSPNAG00000015599) cbln1 (ENSPNAG00000003394) n4bp1 (ENSPNAG00000015520) siah1 (ENSPNAG00000015510) lonp2 (ENSPNAG00000015490) il34 (ENSPNAG00000015434) sf3b3 (ENSPNAG00000015419) st3gal2 (ENSPNAG00000015314) aars1 (ENSPNAG00000015269) ENSPNAG00000015237 pllp (ENSPNAG00000015182) arl2bp (ENSPNAG00000015169) arih1 (ENSPNAG00000015135) ENSPNAG00000015080 ppcdc (ENSPNAG00000015060) hacd3 (ENSPNAG00000015056) #22 ints14 (ENSPNAG00000015024) #23 SLC24A1 (ENSPNAG00000003338) #24 dennd4a (ENSPNAG00000014917) #25 rab11a (ENSPNAG00000014863) #26 ENSPNAG00000014837 ##27 map2k1 (ENSPNAG00000014728) #31 rpl4 (ENSPNAG00000014698) #33 zwilch (ENSPNAG00000014620) #34 LCTL (ENSPNAG00000003168) #35 snapc5 (ENSPNAG00000014521) #32 smad6b (ENSPNAG00000014508) #36 smad3b (ENSPNAG00000003144) #37 aagab (ENSPNAG00000014473) iqch (ENSPNAG00000014434) zgc:162898 (ENSPNAG00000003117) Mexicana tetra MODERN SPECIES 9 ENSAMXG00000032296 cbln1 (ENSAMXG00000041854) n4bp1 (ENSAMXG00000029866) siah1 (ENSAMXG00000040928) lonp2 (ENSAMXG00000003436) il34 (ENSAMXG00000029682) sf3b3 (ENSAMXG00000003410) st3gal2 (ENSAMXG00000003386) aars1 (ENSAMXG00000003368) ENSAMXG00000003354 pllp (ENSAMXG00000037550) arl2bp (ENSAMXG00000039327) arih1 (ENSAMXG00000003281) ENSAMXG00000003257 ppcdc (ENSAMXG00000038023) hacd3 (ENSAMXG00000036622) #22 ints14 (ENSAMXG00000003207) #23 SLC24A1 (ENSAMXG00000003180) #24 dennd4a (ENSAMXG00000003173) #25 rab11a (ENSAMXG00000003155) #26 ENSAMXG00000003031 ##27 map2k1 (ENSAMXG00000003000) #31 rpl4 (ENSAMXG00000029678) #33 zwilch (ENSAMXG00000042209) #34 LCTL (ENSAMXG00000002915) #35 snapc5 (ENSAMXG00000035746) #32 ENSAMXG00000042016 smad6b (ENSAMXG00000002889) #36 smad3b (ENSAMXG00000002880) #37 aagab (ENSAMXG00000034247) iqch (ENSAMXG00000002847) Electric eel MODERN SPECIES 655 ppcdc (ENSEEEG00000022669) hacd3 (ENSEEEG00000022666) #22 ints14 (ENSEEEG00000022663) #23 SLC24A1 (ENSEEEG00000022661) #24 dennd4a (ENSEEEG00000022659) #25 rab11a (ENSEEEG00000022658) #26 ENSEEEG00000022657 ENSEEEG00000022655 ##27 map2k1 (ENSEEEG00000022402) #31 slc28a1 (ENSEEEG00000022360) ENSEEEG00000022359 ENSEEEG00000022358 Cyprinoidei ANCESTRAL SPECIES 10 ENSGT00940000163703.b ENSGT00940000159811 ENSGT00940000158682 ENSGT00940000154837 ENSGT00530000063553.b.b ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b.i #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 123 ENSGT00940000163703.b.c ENSGT00940000159811.h ENSGT00940000158682.c ENSGT00940000154837.k ENSGT00530000063553.b.b.d ENSGT00940000168336.c ENSGT00950000183151.a.a.b.b.i ENSGT00940000156356.d ENSGT00940000157335.l ENSGT01050000244866.C.b ENSGT00940000156011.`b ENSGT00390000015052.b ENSGT00940000155744.g.a ENSGT00940000169185.a ENSGT00440000038107.o ENSGT00530000062962.b.a.f.a #22 ENSGT00390000009486.e #23 ENSGT01030000234532.B.e.b.f.b #24 ENSGT00940000155836.B.c #25 ENSGT00940000154914.tb #26 ENSGT00940000155333.A.b.b ##27 ENSGT00940000153487.b.b.s #31 ENSGT00390000018145.f #33 ENSGT00940000157369.a.c #35 ENSGT00390000010331.n #32 ENSGT00940000158146.b.f #36 ENSGT00940000153499.b.b.d.a.b.i.b #37 ENSGT00390000007218.q ENSGT00390000008908.a Cyprininae_a ANCESTRAL SPECIES 131 ENSGT00940000163703.b.c ENSGT00940000159811.h ENSGT00940000158682.c ENSGT00940000154837.k ENSGT00530000063553.b.b.d ENSGT00940000168336.c ENSGT00950000183151.a.a.b.b.i ENSGT00940000156356.d ENSGT00940000157335.l ENSGT01050000244866.C.b ENSGT00940000156011.`b ENSGT00390000015052.b ENSGT00940000155744.g.a ENSGT00940000169185.a ENSGT00440000038107.o ENSGT00530000062962.b.a.f.a #22 ENSGT00390000009486.e #23 ENSGT01030000234532.B.e.b.f.b #24 ENSGT00940000155836.B.c #25 ENSGT00940000154914.tb #26 ENSGT00940000155333.A.b.b ##27 ENSGT00940000153487.b.b.s #31 ENSGT00390000018145.f #33 ENSGT00390000013696.f #34 ENSGT00940000157369.a.c #35 ENSGT00390000010331.n #32 ENSGT00940000158146.b.f #36 ENSGT00940000153499.b.b.d.a.b.i.b #37 ENSGT00390000007218.q ENSGT00390000008908.a Common carp reference MODERN SPECIES 9 si:ch211-212o1.2 (ENSCCRG00000080717) cbln1 (ENSCCRG00000077181) n4bp1 (ENSCCRG00000061978) siah1 (ENSCCRG00000072198) lonp2 (ENSCCRG00000034928) il34 (ENSCCRG00000060641) sf3b3 (ENSCCRG00000024068) st3gal2 (ENSCCRG00000076295) aars1 (ENSCCRG00000005376) ENSCCRG00000006513 pllp (ENSCCRG00000005176) arl2bp (ENSCCRG00000005183) arih1 (ENSCCRG00000025952) ENSCCRG00000081007 ppcdc (ENSCCRG00000018299) hacd3 (ENSCCRG00000017852) #22 ints14 (ENSCCRG00000047151) #23 SLC24A1 (ENSCCRG00000066083) #24 dennd4a (ENSCCRG00000020231) #25 rab11a (ENSCCRG00000059058) #26 ENSCCRG00000009371 ##27 map2k1 (ENSCCRG00000035016) #31 rpl4 (ENSCCRG00000034465) #33 LCTL (ENSCCRG00000034940) #35 snapc5 (ENSCCRG00000076911) #32 smad6b (ENSCCRG00000028531) #36 smad3b (ENSCCRG00000014185) #37 aagab (ENSCCRG00000014234) iqch (ENSCCRG00000014287) ENSCCRG00000064665 skor1b (ENSCCRG00000043233) Golden-line barbel MODERN SPECIES 54 ZNF423 (ENSSGRG00000030816) si:ch211-212o1.2 (ENSSGRG00000030805) cbln1 (ENSSGRG00000030803) n4bp1 (ENSSGRG00000030802) lonp2 (ENSSGRG00000030801) il34 (ENSSGRG00000030800) SF3B3 (ENSSGRG00000030799) ENSSGRG00000030794 ENSSGRG00000030795 st3gal2 (ENSSGRG00000030792) aars1 (ENSSGRG00000029996) ENSSGRG00000029983 arih1 (ENSSGRG00000029910) ENSSGRG00000029906 ppcdc (ENSSGRG00000029905) hacd3 (ENSSGRG00000029894) #22 ints14 (ENSSGRG00000029760) #23 SLC24A1 (ENSSGRG00000029751) #24 dennd4a (ENSSGRG00000028490) #25 rab11a (ENSSGRG00000028469) #26 ENSSGRG00000028343 ##27 map2k1 (ENSSGRG00000026412) #31 rpl4 (ENSSGRG00000026237) #33 zwilch (ENSSGRG00000026228) #34 LCTL (ENSSGRG00000026226) #35 snapc5 (ENSSGRG00000026223) #32 smad6b (ENSSGRG00000026221) #36 smad3b (ENSSGRG00000025385) #37 aagab (ENSSGRG00000025352) iqch (ENSSGRG00000025341) zgc:162898 (ENSSGRG00000025335) Goldfish MODERN SPECIES 37 si:ch211-212o1.2 (ENSCARG00000065783) cbln1 (ENSCARG00000065779) n4bp1 (ENSCARG00000065774) siah1 (ENSCARG00000065769) lonp2 (ENSCARG00000065548) il34 (ENSCARG00000065462) sf3b3 (ENSCARG00000065369) st3gal2 (ENSCARG00000065325) aars1 (ENSCARG00000065093) ENSCARG00000064321 pllp (ENSCARG00000064293) arl2bp (ENSCARG00000064261) arih1 (ENSCARG00000063977) ENSCARG00000063954 ppcdc (ENSCARG00000063932) hacd3 (ENSCARG00000063827) #22 ints14 (ENSCARG00000063746) #23 SLC24A1 (ENSCARG00000063727) #24 dennd4a (ENSCARG00000062471) #25 rab11a (ENSCARG00000062368) #26 ENSCARG00000058612 ##27 map2k1 (ENSCARG00000057706) #31 rpl4 (ENSCARG00000057625) #33 LCTL (ENSCARG00000057492) #35 snapc5 (ENSCARG00000057463) #32 smad6b (ENSCARG00000057432) #36 smad3b (ENSCARG00000057166) #37 aagab (ENSCARG00000057137) ENSCARG00000057132 skor1b (ENSCARG00000057106) ENSCARG00000057077 Cyprininae ANCESTRAL SPECIES 74 ENSGT00940000163703.b.d ENSGT00940000159811.g ENSGT00940000158682.d ENSGT00940000154837.l ENSGT00530000063553.b.b.c ENSGT00940000168336.d ENSGT00950000183151.a.a.b.b.j ENSGT00940000156356.c ENSGT00940000157335.k ENSGT01050000244866.C.a ENSGT00940000156011.ab ENSGT00390000015052.a ENSGT00940000155744.g.b ENSGT00940000169185.b ENSGT00440000038107.p ENSGT00530000062962.b.a.f.b #22 ENSGT00390000009486.f #23 ENSGT01030000234532.B.e.b.f.a #24 ENSGT00940000155836.B.d #25 ENSGT00940000154914.ub #26 ENSGT00940000155333.A.b.a ##27 ENSGT00940000153487.b.b.t #31 ENSGT00390000018145.e #33 ENSGT00390000013696 #34 ENSGT00940000157369.a.d #35 ENSGT00390000010331.m #32 ENSGT00940000158146.b.e #36 ENSGT00940000153499.b.b.d.a.b.i.a #37 ENSGT00390000007218.r ENSGT00390000008908.b ENSGT00390000015942 Goldfish MODERN SPECIES 9 si:ch211-212o1.2 (ENSCARG00000011103) cbln1 (ENSCARG00000011105) n4bp1 (ENSCARG00000011117) siah1 (ENSCARG00000011126) lonp2 (ENSCARG00000011141) il34 (ENSCARG00000011515) sf3b3 (ENSCARG00000011537) st3gal2 (ENSCARG00000011584) aars1 (ENSCARG00000011630) ENSCARG00000011736 pllp (ENSCARG00000011891) arl2bp (ENSCARG00000011894) arih1 (ENSCARG00000011916) ENSCARG00000011988 ppcdc (ENSCARG00000011991) hacd3 (ENSCARG00000012002) #22 ints14 (ENSCARG00000012147) #23 SLC24A1 (ENSCARG00000012194) #24 dennd4a (ENSCARG00000012263) #25 rab11a (ENSCARG00000013410) #26 ENSCARG00000013448 ##27 map2k1 (ENSCARG00000013618) #31 rpl4 (ENSCARG00000013743) #33 zwilch (ENSCARG00000013771) #34 LCTL (ENSCARG00000013798) #35 snapc5 (ENSCARG00000013818) #32 smad6b (ENSCARG00000013826) #36 smad3b (ENSCARG00000013852) #37 aagab (ENSCARG00000013875) iqch (ENSCARG00000013907) zgc:162898 (ENSCARG00000013951) Cyprininae_a ANCESTRAL SPECIES 15 ENSGT00940000163703.b.d ENSGT00940000159811.g ENSGT00940000158682.d ENSGT00940000154837.l ENSGT00530000063553.b.b.c ENSGT00940000168336.d ENSGT00950000183151.a.a.b.b.j ENSGT00940000156356.c ENSGT00940000157335.k ENSGT01050000244866.C.a ENSGT00940000156011.ab ENSGT00390000015052.a ENSGT00940000155744.g.b ENSGT00940000169185.b ENSGT00440000038107.p ENSGT00530000062962.b.a.f.b #22 ENSGT00390000009486.f #23 ENSGT01030000234532.B.e.b.f.a #24 ENSGT00940000155836.B.d #25 ENSGT00940000154914.ub #26 ENSGT00940000155333.A.b.a ##27 ENSGT00940000153487.b.b.t #31 ENSGT00390000018145.e #33 ENSGT00390000013696.e #34 ENSGT00940000157369.a.d #35 ENSGT00390000010331.m #32 ENSGT00940000158146.b.e #36 ENSGT00940000153499.b.b.d.a.b.i.a #37 ENSGT00390000007218.r ENSGT00390000008908.b ENSGT00390000015942 Golden-line barbel MODERN SPECIES 224 ppcdc (ENSSGRG00000053835) hacd3 (ENSSGRG00000053825) #22 ints14 (ENSSGRG00000053784) #23 SLC24A1 (ENSSGRG00000053777) #24 dennd4a (ENSSGRG00000053530) #25 rab11a (ENSSGRG00000053474) #26 ENSSGRG00000053461 ##27 map2k1 (ENSSGRG00000053371) #31 rpl4 (ENSSGRG00000053329) #33 zwilch (ENSSGRG00000053327) #34 LCTL (ENSSGRG00000053324) #35 snapc5 (ENSSGRG00000053323) #32 smad6b (ENSSGRG00000053322) #36 ENSSGRG00000053321 #37 aagab (ENSSGRG00000053318) iqch (ENSSGRG00000053315) zgc:162898 (ENSSGRG00000053314) Common carp reference MODERN SPECIES 19 znf423 (ENSCCRG00000039463) si:ch211-212o1.2 (ENSCCRG00000055857) cbln1 (ENSCCRG00000081095) n4bp1 (ENSCCRG00000029198) siah1 (ENSCCRG00000073445) lonp2 (ENSCCRG00000070534) il34 (ENSCCRG00000025227) sf3b3 (ENSCCRG00000026756) st3gal2 (ENSCCRG00000077284) aars1 (ENSCCRG00000004748) ENSCCRG00000005086 arl2bp (ENSCCRG00000058906) arih1 (ENSCCRG00000005206) ENSCCRG00000071734 ppcdc (ENSCCRG00000072999) hacd3 (ENSCCRG00000047136) #22 ints14 (ENSCCRG00000017792) #23 SLC24A1 (ENSCCRG00000009282) #24 ENSCCRG00000072431 dennd4a (ENSCCRG00000009528) #25 rab11a (ENSCCRG00000009402) #26 ENSCCRG00000073950 ##27 map2k1 (ENSCCRG00000077344) #31 zwilch (ENSCCRG00000034439) #34 LCTL (ENSCCRG00000017070) #35 snapc5 (ENSCCRG00000078719) #32 smad6b (ENSCCRG00000017061) #36 smad3b (ENSCCRG00000067387) #37 aagab (ENSCCRG00000016912) iqch (ENSCCRG00000077345) skor1b (ENSCCRG00000014176) Zebrafish MODERN SPECIES 9 ENSDARG00000112014 cbln1 (ENSDARG00000057296) n4bp1 (ENSDARG00000057491) siah1 (ENSDARG00000030871) lonp2 (ENSDARG00000101438) il34 (ENSDARG00000091003) sf3b3 (ENSDARG00000103553) st3gal2 (ENSDARG00000112898) aars1 (ENSDARG00000069142) ENSDARG00000093381 pllp (ENSDARG00000062756) arl2bp (ENSDARG00000025383) arih1 (ENSDARG00000003616) ENSDARG00000069168 ppcdc (ENSDARG00000033020) hacd3 (ENSDARG00000016038) #22 ints14 (ENSDARG00000041429) #23 SLC24A1 (ENSDARG00000041431) #24 dennd4a (ENSDARG00000062721) #25 ENSDARG00000092535 ENSDARG00000069189 rab11a (ENSDARG00000041450) #26 ENSDARG00000062686 ##27 map2k1 (ENSDARG00000007825) #31 rpl4 (ENSDARG00000041182) #33 zwilch (ENSDARG00000057100) #34 LCTL (ENSDARG00000016337) #35 snapc5 (ENSDARG00000062476) #32 smad6b (ENSDARG00000031763) #36 smad3b (ENSDARG00000010207) #37 aagab (ENSDARG00000041170) Clupeiformes ANCESTRAL SPECIES 4 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366.cb ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B.e #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 Denticle herring MODERN SPECIES 8 MAN2C1 (ENSDCDG00000022796) neil1 (ENSDCDG00000022781) commd4 (ENSDCDG00000022776) islr2 (ENSDCDG00000022773) sema7a (ENSDCDG00000022767) islr2 (ENSDCDG00000022765) stra6 (ENSDCDG00000022373) ENSDCDG00000022353 cyp11a1.1 (ENSDCDG00000022348) stoml1 (ENSDCDG00000022343) nr2e3 (ENSDCDG00000022341) hexa (ENSDCDG00000022236) arih1 (ENSDCDG00000022181) ENSDCDG00000022175 ppcdc (ENSDCDG00000022174) hacd3 (ENSDCDG00000022160) #22 ints14 (ENSDCDG00000022144) #23 SLC24A1 (ENSDCDG00000022137) #24 dennd4a (ENSDCDG00000022118) #25 rab11a (ENSDCDG00000034506) #26 ENSDCDG00000034401 ##27 TDG (ENSDCDG00000034392) tdg.1 (ENSDCDG00000034387) ENSDCDG00000034376 ENSDCDG00000034368 samm50 (ENSDCDG00000034358) ENSDCDG00000034357 RAB19 (ENSDCDG00000034353) ccdc34 (ENSDCDG00000034351) ENSDCDG00000034350 PRKAR2B (ENSDCDG00000034323) Atlantic herring MODERN SPECIES 19 MAN2C1 (ENSCHAG00000005362) neil1 (ENSCHAG00000005274) commd4 (ENSCHAG00000005256) sema7a (ENSCHAG00000005220) islr2 (ENSCHAG00000005198) stra6 (ENSCHAG00000004961) ENSCHAG00000004932 ENSCHAG00000004915 cyp11a1.1 (ENSCHAG00000004846) stoml1 (ENSCHAG00000004806) nr2e3 (ENSCHAG00000004783) hexa (ENSCHAG00000004565) arih1 (ENSCHAG00000004536) ENSCHAG00000004518 ppcdc (ENSCHAG00000004502) hacd3 (ENSCHAG00000004038) #22 ints14 (ENSCHAG00000003814) #23 SLC24A1 (ENSCHAG00000003677) #24 dennd4a (ENSCHAG00000003270) #25 rab11a (ENSCHAG00000002433) #26 ENSCHAG00000000584 ##27 map2k1 (ENSCHAG00000000220) #31 snapc5 (ENSCHAG00000000160) #32 LCTL (ENSCHAG00000000142) #35 zwilch (ENSCHAG00000000117) #34 rpl4 (ENSCHAG00000023757) #33 map2k1 (ENSCHAG00000023747) #31 smad6b (ENSCHAG00000023735) #36 ENSCHAG00000023728 smad6b (ENSCHAG00000023725) #36 ENSCHAG00000023724 Euteleosteomorpha ANCESTRAL SPECIES 1 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Acanthomorphata ANCESTRAL SPECIES 4 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Euacanthomorphacea ANCESTRAL SPECIES 7 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Percomorphaceae ANCESTRAL SPECIES 4 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Tiger tail seahorse MODERN SPECIES 249 ENSHCOG00000013518 fbxl22 (ENSHCOG00000013523) ENSHCOG00000013533 ENSHCOG00000013933 MAN2C1 (ENSHCOG00000013987) neil1 (ENSHCOG00000014018) commd4 (ENSHCOG00000000394) sema7a (ENSHCOG00000014100) islr2 (ENSHCOG00000014105) stra6 (ENSHCOG00000014143) cyp11a1.1 (ENSHCOG00000014162) stoml1 (ENSHCOG00000014203) arih1 (ENSHCOG00000014228) ENSHCOG00000014240 ppcdc (ENSHCOG00000014241) hacd3 (ENSHCOG00000014277) #22 ints14 (ENSHCOG00000014315) #23 SLC24A1 (ENSHCOG00000014347) #24 ENSHCOG00000014412 ##25 ENSHCOG00000014452 ##27 map2k1 (ENSHCOG00000014666) #31 rpl4 (ENSHCOG00000014929) #33 zwilch (ENSHCOG00000014943) #34 LCTL (ENSHCOG00000014977) #35 snapc5 (ENSHCOG00000014982) #32 smad6b (ENSHCOG00000015011) #36 smad3b (ENSHCOG00000015055) #37 aagab (ENSHCOG00000015070) zgc:162898 (ENSHCOG00000015085) skor1b (ENSHCOG00000015092) PIAS1 (ENSHCOG00000015129) Percomorphaceae_B ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Percomorphaceae_C ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Percomorphaceae_D ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Anabantaria ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Anabantoidei ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Climbing perch MODERN SPECIES 19 CA12 (ENSATEG00000008047) MAN2C1 (ENSATEG00000008308) neil1 (ENSATEG00000008457) commd4 (ENSATEG00000025527) sema7a (ENSATEG00000008619) islr2 (ENSATEG00000008628) stra6 (ENSATEG00000008644) ENSATEG00000008870 cyp11a1.1 (ENSATEG00000008908) stoml1 (ENSATEG00000008950) nr2e3 (ENSATEG00000009037) hexa (ENSATEG00000009154) arih1 (ENSATEG00000009186) ENSATEG00000009236 ppcdc (ENSATEG00000029359) hacd3 (ENSATEG00000025872) #22 ints14 (ENSATEG00000009319) #23 SLC24A1 (ENSATEG00000009377) #24 ENSATEG00000009439 ##25 ENSATEG00000009531 ##27 map2k1 (ENSATEG00000009613) #31 rpl4 (ENSATEG00000009670) #33 zwilch (ENSATEG00000009702) #34 LCTL (ENSATEG00000009711) #35 snapc5 (ENSATEG00000009776) #32 smad6b (ENSATEG00000009784) #36 smad3b (ENSATEG00000009812) #37 aagab (ENSATEG00000009864) iqch (ENSATEG00000009880) C15orf61 (ENSATEG00000028998) skor1b (ENSATEG00000009950) Siamese fighting fish MODERN SPECIES 17 fbxl22 (ENSBSLG00000011639) usp3 (ENSBSLG00000011872) si:dkeyp-73b11.8 (ENSBSLG00000012761) CA12 (ENSBSLG00000012772) MAN2C1 (ENSBSLG00000012871) neil1 (ENSBSLG00000012950) sema7a (ENSBSLG00000012956) islr2 (ENSBSLG00000012959) stra6 (ENSBSLG00000012960) ENSBSLG00000012981 cyp11a1.1 (ENSBSLG00000013006) hexa (ENSBSLG00000014091) arih1 (ENSBSLG00000014624) ENSBSLG00000014828 ppcdc (ENSBSLG00000014843) hacd3 (ENSBSLG00000014925) #22 ints14 (ENSBSLG00000014980) #23 SLC24A1 (ENSBSLG00000015079) #24 ENSBSLG00000015093 ##25 ENSBSLG00000015132 ##27 map2k1 (ENSBSLG00000015609) #31 rpl4 (ENSBSLG00000016291) #33 zwilch (ENSBSLG00000016330) #34 LCTL (ENSBSLG00000016343) #35 snapc5 (ENSBSLG00000016407) #32 smad6b (ENSBSLG00000016413) #36 smad3b (ENSBSLG00000016420) #37 aagab (ENSBSLG00000016446) iqch (ENSBSLG00000016456) zgc:162898 (ENSBSLG00000016466) skor1b (ENSBSLG00000016468) Zig-zag eel MODERN SPECIES 20 si:dkeyp-73b11.8 (ENSMAMG00000007254) CA12 (ENSMAMG00000007184) MAN2C1 (ENSMAMG00000007061) neil1 (ENSMAMG00000007164) commd4 (ENSMAMG00000007025) sema7a (ENSMAMG00000007015) islr2 (ENSMAMG00000007007) stra6 (ENSMAMG00000006937) ENSMAMG00000006892 cyp11a1.1 (ENSMAMG00000006863) nr2e3 (ENSMAMG00000006787) hexa (ENSMAMG00000006611) arih1 (ENSMAMG00000006559) ENSMAMG00000006536 ppcdc (ENSMAMG00000006514) hacd3 (ENSMAMG00000006428) #22 ints14 (ENSMAMG00000006472) #23 SLC24A1 (ENSMAMG00000006350) #24 ENSMAMG00000006239 ##25 ENSMAMG00000006178 ##27 map2k1 (ENSMAMG00000006146) #31 rpl4 (ENSMAMG00000006058) #33 zwilch (ENSMAMG00000006031) #34 LCTL (ENSMAMG00000006001) #35 snapc5 (ENSMAMG00000005992) #32 ENSMAMG00000024281 smad6b (ENSMAMG00000005972) #36 smad3b (ENSMAMG00000005952) #37 aagab (ENSMAMG00000005930) iqch (ENSMAMG00000005883) zgc:162898 (ENSMAMG00000005865) Carangaria ANCESTRAL SPECIES 6 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Pleuronectoidei ANCESTRAL SPECIES ENSGT00940000157850 ENSGT00940000168688 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Turbot MODERN SPECIES 1 usp3 (ENSSMAG00000015544) si:dkeyp-73b11.8 (ENSSMAG00000015518) CA12 (ENSSMAG00000015506) MAN2C1 (ENSSMAG00000015304) neil1 (ENSSMAG00000015491) commd4 (ENSSMAG00000015462) sema7a (ENSSMAG00000015292) islr2 (ENSSMAG00000015283) stra6 (ENSSMAG00000015243) ENSSMAG00000015209 cyp11a1.1 (ENSSMAG00000015163) nr2e3 (ENSSMAG00000015123) arih1 (ENSSMAG00000015075) ENSSMAG00000015064 ppcdc (ENSSMAG00000015044) hacd3 (ENSSMAG00000015006) #22 ints14 (ENSSMAG00000014965) #23 SLC24A1 (ENSSMAG00000014927) #24 SLC24A1 (ENSSMAG00000014916) #24 ENSSMAG00000014740 ##25 ENSSMAG00000014692 ##27 ENSSMAG00000028102 map2k1 (ENSSMAG00000014654) #31 rpl4 (ENSSMAG00000014547) #33 zwilch (ENSSMAG00000014527) #34 LCTL (ENSSMAG00000014482) #35 snapc5 (ENSSMAG00000014452) #32 smad6b (ENSSMAG00000014437) #36 smad3b (ENSSMAG00000014385) #37 aagab (ENSSMAG00000014364) iqch (ENSSMAG00000014326) Carangaria_A ANCESTRAL SPECIES ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Seriola ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Yellowtail amberjack MODERN SPECIES 3044 CA12 (ENSSLDG00000024254) ENSSLDG00000024186 neil1 (ENSSLDG00000024179) commd4 (ENSSLDG00000024172) sema7a (ENSSLDG00000024152) islr2 (ENSSLDG00000024147) stra6 (ENSSLDG00000024104) ENSSLDG00000024086 cyp11a1.1 (ENSSLDG00000024083) stoml1 (ENSSLDG00000024076) nr2e3 (ENSSLDG00000023960) hexa (ENSSLDG00000023910) arih1 (ENSSLDG00000023887) ENSSLDG00000023878 ppcdc (ENSSLDG00000023867) hacd3 (ENSSLDG00000023846) #22 ints14 (ENSSLDG00000023818) #23 ENSSLDG00000023813 #24 SLC24A1 (ENSSLDG00000023774) #24 ENSSLDG00000023736 ##25 ENSSLDG00000023706 ##27 map2k1 (ENSSLDG00000023678) #31 rpl4 (ENSSLDG00000023658) #33 zwilch (ENSSLDG00000023641) #34 LCTL (ENSSLDG00000023587) #35 snapc5 (ENSSLDG00000023570) #32 smad6b (ENSSLDG00000023557) #36 smad3b (ENSSLDG00000023534) #37 aagab (ENSSLDG00000023521) iqch (ENSSLDG00000023494) zgc:162898 (ENSSLDG00000023483) Greater amberjack MODERN SPECIES 82 CA12 (ENSSDUG00000008779) MAN2C1 (ENSSDUG00000008735) neil1 (ENSSDUG00000008709) commd4 (ENSSDUG00000008698) sema7a (ENSSDUG00000008675) islr2 (ENSSDUG00000008671) stra6 (ENSSDUG00000008630) ENSSDUG00000008592 cyp11a1.1 (ENSSDUG00000008603) stoml1 (ENSSDUG00000008576) nr2e3 (ENSSDUG00000008558) hexa (ENSSDUG00000008531) arih1 (ENSSDUG00000008436) ENSSDUG00000008409 ppcdc (ENSSDUG00000008384) hacd3 (ENSSDUG00000008342) #22 ints14 (ENSSDUG00000008301) #23 SLC24A1 (ENSSDUG00000008280) #24 SLC24A1 (ENSSDUG00000008265) #24 ENSSDUG00000008166 ##25 ENSSDUG00000008123 ##27 map2k1 (ENSSDUG00000008098) #31 RPL4 (ENSSDUG00000008061) #33 zwilch (ENSSDUG00000008041) #34 LCTL (ENSSDUG00000008008) #35 snapc5 (ENSSDUG00000008001) #32 smad6b (ENSSDUG00000007977) #36 smad3b (ENSSDUG00000007957) #37 aagab (ENSSDUG00000007934) iqch (ENSSDUG00000007847) zgc:162898 (ENSSDUG00000007821) Barramundi perch MODERN SPECIES 17 CA12 (ENSLCAG00010011366) MAN2C1 (ENSLCAG00010011398) ENSLCAG00010011472 neil1 (ENSLCAG00010011474) commd4 (ENSLCAG00010011476) sema7a (ENSLCAG00010011483) islr2 (ENSLCAG00010011486) stra6 (ENSLCAG00010011487) ENSLCAG00010011491 cyp11a1.1 (ENSLCAG00010011508) nr2e3 (ENSLCAG00010011582) hexa (ENSLCAG00010011617) arih1 (ENSLCAG00010011638) ENSLCAG00010011674 ppcdc (ENSLCAG00010011677) hacd3 (ENSLCAG00010011684) #22 ints14 (ENSLCAG00010011694) #23 SLC24A1 (ENSLCAG00010011706) #24 ENSLCAG00010011723 ##25 ENSLCAG00010011752 ENSLCAG00010011758 ##27 map2k1 (ENSLCAG00010011873) #31 rpl4 (ENSLCAG00010012306) #33 zwilch (ENSLCAG00010012324) #34 LCTL (ENSLCAG00010012337) #35 snapc5 (ENSLCAG00010012353) #32 smad6b (ENSLCAG00010012358) #36 smad3b (ENSLCAG00010012407) #37 aagab (ENSLCAG00010012566) iqch (ENSLCAG00010012573) zgc:162898 (ENSLCAG00010012578) Eupercaria ANCESTRAL SPECIES 6 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Tetraodontidae ANCESTRAL SPECIES 11 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000168688 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b.p #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b Tetraodon MODERN SPECIES 4 ENSTNIG00000008408 fbxl22 (ENSTNIG00000008409) usp3 (ENSTNIG00000008410) ENSTNIG00000001490 CA12 (ENSTNIG00000008411) MAN2C1 (ENSTNIG00000008412) neil1 (ENSTNIG00000008413) commd4 (ENSTNIG00000008414) sema7a (ENSTNIG00000008415) islr2 (ENSTNIG00000008416) stra6 (ENSTNIG00000008417) cyp11a1.1 (ENSTNIG00000008418) stoml1 (ENSTNIG00000008419) arih1 (ENSTNIG00000008420) ppcdc (ENSTNIG00000008421) hacd3 (ENSTNIG00000008422) #22 ints14 (ENSTNIG00000008423) #23 SLC24A1 (ENSTNIG00000008424) #24 ENSTNIG00000008425 ##25 ENSTNIG00000008426 ##27 map2k1 (ENSTNIG00000008427) #31 rpl4 (ENSTNIG00000008428) #33 zwilch (ENSTNIG00000008429) #34 LCTL (ENSTNIG00000008430) #35 smad6b (ENSTNIG00000008431) #36 smad3b (ENSTNIG00000008432) #37 aagab (ENSTNIG00000008433) skor1b (ENSTNIG00000001504) PIAS1 (ENSTNIG00000008434) morf4l1 (ENSTNIG00000008435) TLE3 (ENSTNIG00000008436) Fugu MODERN SPECIES 21 TBC1D2B (ENSTRUG00000012809) ENSTRUG00000012994 ENSTRUG00000020001 fbxl22 (ENSTRUG00000013054) usp3 (ENSTRUG00000013067) ENSTRUG00000027381 CA12 (ENSTRUG00000013194) commd4 (ENSTRUG00000013548) sema7a (ENSTRUG00000013566) stra6 (ENSTRUG00000019577) cyp11a1.1 (ENSTRUG00000013804) stoml1 (ENSTRUG00000019856) arih1 (ENSTRUG00000013998) ENSTRUG00000022549 ppcdc (ENSTRUG00000014075) hacd3 (ENSTRUG00000031290) #22 ints14 (ENSTRUG00000014091) #23 SLC24A1 (ENSTRUG00000014175) #24 ENSTRUG00000014237 ##25 ENSTRUG00000014394 ##27 map2k1 (ENSTRUG00000014529) #31 rpl4 (ENSTRUG00000014667) #33 zwilch (ENSTRUG00000021693) #34 LCTL (ENSTRUG00000014732) #35 snapc5 (ENSTRUG00000020463) #32 smad6b (ENSTRUG00000021541) #36 smad3b (ENSTRUG00000014802) #37 aagab (ENSTRUG00000014949) zgc:162898 (ENSTRUG00000020437) skor1b (ENSTRUG00000014982) morf4l1 (ENSTRUG00000015077) Eupecaria_A ANCESTRAL SPECIES 7 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Ballan wrasse MODERN SPECIES 40 ENSLBEG00000016912 CA12 (ENSLBEG00000016859) MAN2C1 (ENSLBEG00000016738) ENSLBEG00000016684 commd4 (ENSLBEG00000016670) sema7a (ENSLBEG00000016623) islr2 (ENSLBEG00000016601) stra6 (ENSLBEG00000016572) ENSLBEG00000016546 cyp11a1.1 (ENSLBEG00000016502) nr2e3 (ENSLBEG00000016464) hexa (ENSLBEG00000016294) arih1 (ENSLBEG00000016202) ENSLBEG00000016174 ppcdc (ENSLBEG00000016135) hacd3 (ENSLBEG00000016087) #22 ints14 (ENSLBEG00000016057) #23 SLC24A1 (ENSLBEG00000016038) #24 SLC24A1 (ENSLBEG00000016014) #24 ENSLBEG00000015940 ##25 ENSLBEG00000015733 ##27 map2k1 (ENSLBEG00000015601) #31 rpl4 (ENSLBEG00000015490) #33 zwilch (ENSLBEG00000015453) #34 LCTL (ENSLBEG00000015396) #35 snapc5 (ENSLBEG00000015381) #32 smad6b (ENSLBEG00000015360) #36 smad3b (ENSLBEG00000015322) #37 aagab (ENSLBEG00000015299) iqch (ENSLBEG00000015224) zgc:162898 (ENSLBEG00000015192) Eupecaria_B ANCESTRAL SPECIES 7 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Eupecaria_C ANCESTRAL SPECIES 6 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 4 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b European seabass MODERN SPECIES 19 ENSDLAG00005022822 CA12 (ENSDLAG00005022828) ENSDLAG00005022859 neil1 (ENSDLAG00005023089) sema7a (ENSDLAG00005023103) islr2 (ENSDLAG00005023110) stra6 (ENSDLAG00005023124) ENSDLAG00005023196 cyp11a1.1 (ENSDLAG00005001579) nr2e3 (ENSDLAG00005001714) hexa (ENSDLAG00005001862) arih1 (ENSDLAG00005026838) ENSDLAG00005033300 ENSDLAG00005004072 ints14 (ENSDLAG00005004123) #23 hacd3 (ENSDLAG00005004092) #22 ENSDLAG00005004229 #24 ENSDLAG00005004243 #24 ENSDLAG00005004333 ##25 ENSDLAG00005004815 ##27 map2k1 (ENSDLAG00005005002) #31 rpl4 (ENSDLAG00005005228) #33 zwilch (ENSDLAG00005005332) #34 LCTL (ENSDLAG00005005497) #35 snapc5 (ENSDLAG00005005541) #32 smad6b (ENSDLAG00005033513) #36 smad3b (ENSDLAG00005005574) #37 aagab (ENSDLAG00005005902) zgc:162898 (ENSDLAG00005031120) skor1b (ENSDLAG00005005972) PIAS1 (ENSDLAG00005006027) Large yellow croaker MODERN SPECIES 492 CA12 (ENSLCRG00005011255) MAN2C1 (ENSLCRG00005011220) neil1 (ENSLCRG00005011212) commd4 (ENSLCRG00005011208) sema7a (ENSLCRG00005011205) islr2 (ENSLCRG00005011203) stra6 (ENSLCRG00005011201) ENSLCRG00005011197 cyp11a1.1 (ENSLCRG00005010309) stoml1 (ENSLCRG00005010303) nr2e3 (ENSLCRG00005010302) hexa (ENSLCRG00005010055) arih1 (ENSLCRG00005010040) ENSLCRG00005010032 ppcdc (ENSLCRG00005010030) hacd3 (ENSLCRG00005009991) #22 ints14 (ENSLCRG00005009985) #23 SLC24A1 (ENSLCRG00005009983) #24 SLC24A1 (ENSLCRG00005009980) #24 ENSLCRG00005009722 ##25 ENSLCRG00005009493 ##27 map2k1 (ENSLCRG00005009481) #31 rpl4 (ENSLCRG00005008994) #33 zwilch (ENSLCRG00005008990) #34 LCTL (ENSLCRG00005008987) #35 snapc5 (ENSLCRG00005008983) #32 smad6b (ENSLCRG00005008982) #36 smad3b (ENSLCRG00005008972) #37 aagab (ENSLCRG00005008957) iqch (ENSLCRG00005008950) zgc:162898 (ENSLCRG00005008946) Gilthead seabream MODERN SPECIES 22 ENSSAUG00010007237 CA12 (ENSSAUG00010007240) MAN2C1 (ENSSAUG00010007286) neil1 (ENSSAUG00010007360) commd4 (ENSSAUG00010007361) sema7a (ENSSAUG00010007363) islr2 (ENSSAUG00010007366) stra6 (ENSSAUG00010007368) ENSSAUG00010007372 cyp11a1.1 (ENSSAUG00010007387) nr2e3 (ENSSAUG00010007491) hexa (ENSSAUG00010007538) arih1 (ENSSAUG00010009448) ENSSAUG00010009484 ppcdc (ENSSAUG00010009485) hacd3 (ENSSAUG00010009487) #22 ints14 (ENSSAUG00010009496) #23 SLC24A1 (ENSSAUG00010009505) #24 SLC24A1 (ENSSAUG00010009511) #24 ENSSAUG00010009514 ##25 ENSSAUG00010009554 ##27 map2k1 (ENSSAUG00010010913) #31 rpl4 (ENSSAUG00010011110) #33 zwilch (ENSSAUG00010011149) #34 LCTL (ENSSAUG00010011608) #35 snapc5 (ENSSAUG00010011612) #32 smad6b (ENSSAUG00010011616) #36 smad3b (ENSSAUG00010011625) #37 aagab (ENSSAUG00010011683) iqch (ENSSAUG00010011685) zgc:162898 (ENSSAUG00010011688) Perciformes ANCESTRAL SPECIES 7 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Perciformes_a ANCESTRAL SPECIES 7 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Pike perch MODERN SPECIES 6 ENSSLUG00000017755 CA12 (ENSSLUG00000017761) MAN2C1 (ENSSLUG00000017800) neil1 (ENSSLUG00000017871) commd4 (ENSSLUG00000017867) sema7a (ENSSLUG00000017872) islr2 (ENSSLUG00000017877) stra6 (ENSSLUG00000017890) cyp11a1.1 (ENSSLUG00000017962) stoml1 (ENSSLUG00000018482) nr2e3 (ENSSLUG00000018489) hexa (ENSSLUG00000018512) arih1 (ENSSLUG00000018735) ENSSLUG00000018766 ppcdc (ENSSLUG00000018769) hacd3 (ENSSLUG00000018784) #22 ints14 (ENSSLUG00000018842) #23 SLC24A1 (ENSSLUG00000018879) #24 ENSSLUG00000018947 ##25 ENSSLUG00000019161 ##27 map2k1 (ENSSLUG00000000165) #31 rpl4 (ENSSLUG00000000272) #33 zwilch (ENSSLUG00000000305) #34 LCTL (ENSSLUG00000000329) #35 snapc5 (ENSSLUG00000000334) #32 smad6b (ENSSLUG00000000337) #36 smad3b (ENSSLUG00000000353) #37 aagab (ENSSLUG00000000395) iqch (ENSSLUG00000000409) zgc:162898 (ENSSLUG00000000425) skor1b (ENSSLUG00000000431) Channel bull blenny MODERN SPECIES 20 CYP11A1 (ENSCGOG00000007641) stoml1 (ENSCGOG00000007838) ENSCGOG00000007839 CYP11A1 (ENSCGOG00000007842) stoml1 (ENSCGOG00000007901) CYP11A1 (ENSCGOG00000007940) stoml1 (ENSCGOG00000008005) ENSCGOG00000008049 ENSCGOG00000008055 stoml1 (ENSCGOG00000008136) nr2e3 (ENSCGOG00000008164) hexa (ENSCGOG00000008317) arih1 (ENSCGOG00000010759) ENSCGOG00000010801 ppcdc (ENSCGOG00000010802) hacd3 (ENSCGOG00000010806) #22 ints14 (ENSCGOG00000010944) #23 SLC24A1 (ENSCGOG00000010978) #24 ENSCGOG00000011005 ##25 ENSCGOG00000012718 ##27 map2k1 (ENSCGOG00000012783) #31 rpl4 (ENSCGOG00000014628) #33 zwilch (ENSCGOG00000014660) #34 LCTL (ENSCGOG00000014696) #35 snapc5 (ENSCGOG00000014701) #32 smad6b (ENSCGOG00000014702) #36 smad3b (ENSCGOG00000014715) #37 aagab (ENSCGOG00000015616) iqch (ENSCGOG00000015654) zgc:162898 (ENSCGOG00000015744) skor1b (ENSCGOG00000015746) Cottioidei ANCESTRAL SPECIES 6 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Lumpfish MODERN SPECIES 21 ENSCLMG00005001029 CA12 (ENSCLMG00005001027) neil1 (ENSCLMG00005001024) commd4 (ENSCLMG00005001023) sema7a (ENSCLMG00005001021) islr2 (ENSCLMG00005001020) stra6 (ENSCLMG00005001018) ENSCLMG00005001017 cyp11a1.1 (ENSCLMG00005001002) stoml1 (ENSCLMG00005001000) nr2e3 (ENSCLMG00005000996) hexa (ENSCLMG00005000513) arih1 (ENSCLMG00005000474) ENSCLMG00005000456 ppcdc (ENSCLMG00005000450) hacd3 (ENSCLMG00005000359) #22 ints14 (ENSCLMG00005000331) #23 SLC24A1 (ENSCLMG00005000323) #24 ENSCLMG00005000266 ##25 ENSCLMG00005000242 ##27 map2k1 (ENSCLMG00005000174) #31 RPL4 (ENSCLMG00005019911) #33 rpl4 (ENSCLMG00005019898) #33 zwilch (ENSCLMG00005019897) #34 LCTL (ENSCLMG00005019896) #35 snapc5 (ENSCLMG00005019894) #32 smad6b (ENSCLMG00005019893) #36 smad3b (ENSCLMG00005019769) #37 aagab (ENSCLMG00005019765) iqch (ENSCLMG00005019726) zgc:162898 (ENSCLMG00005019722) Stickleback MODERN SPECIES 14 usp3 (ENSGACG00000004578) ENSGACG00000004593 CA12 (ENSGACG00000004596) MAN2C1 (ENSGACG00000004613) neil1 (ENSGACG00000004670) commd4 (ENSGACG00000004675) sema7a (ENSGACG00000004680) islr2 (ENSGACG00000004691) stra6 (ENSGACG00000004695) cyp11a1.1 (ENSGACG00000004713) stoml1 (ENSGACG00000004724) nr2e3 (ENSGACG00000004739) hexa (ENSGACG00000004744) arih1 (ENSGACG00000004772) ppcdc (ENSGACG00000004795) hacd3 (ENSGACG00000004806) #22 ints14 (ENSGACG00000004827) #23 SLC24A1 (ENSGACG00000004859) #24 ENSGACG00000004867 ##25 ENSGACG00000004885 ##27 map2k1 (ENSGACG00000004903) #31 rpl4 (ENSGACG00000004968) #33 zwilch (ENSGACG00000005043) #34 LCTL (ENSGACG00000005057) #35 snapc5 (ENSGACG00000005078) #32 smad6b (ENSGACG00000005085) #36 smad3b (ENSGACG00000005092) #37 aagab (ENSGACG00000005119) iqch (ENSGACG00000005158) zgc:162898 (ENSGACG00000005167) skor1b (ENSGACG00000005171) Ovalentaria ANCESTRAL SPECIES 7 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Ovalentaria_B ANCESTRAL SPECIES 3 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Pomacentridae ANCESTRAL SPECIES 1 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Pomacentridae_A ANCESTRAL SPECIES 9 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Amphiprion ANCESTRAL SPECIES 4 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Orange clownfish MODERN SPECIES 18 CA12 (ENSAPEG00000019875) MAN2C1 (ENSAPEG00000019898) neil1 (ENSAPEG00000019963) commd4 (ENSAPEG00000019980) sema7a (ENSAPEG00000020006) islr2 (ENSAPEG00000020024) stra6 (ENSAPEG00000020048) ENSAPEG00000020184 cyp11a1.1 (ENSAPEG00000020236) stoml1 (ENSAPEG00000020245) nr2e3 (ENSAPEG00000020258) hexa (ENSAPEG00000020294) arih1 (ENSAPEG00000020341) ENSAPEG00000020412 ppcdc (ENSAPEG00000020454) hacd3 (ENSAPEG00000020472) #22 ints14 (ENSAPEG00000020521) #23 SLC24A1 (ENSAPEG00000020557) #24 SLC24A1 (ENSAPEG00000020576) #24 ENSAPEG00000020590 ##25 ENSAPEG00000020674 ##27 map2k1 (ENSAPEG00000020723) #31 rpl4 (ENSAPEG00000020765) #33 zwilch (ENSAPEG00000020879) #34 LCTL (ENSAPEG00000021009) #35 snapc5 (ENSAPEG00000021082) #32 smad6b (ENSAPEG00000021097) #36 smad3b (ENSAPEG00000021121) #37 aagab (ENSAPEG00000021154) iqch (ENSAPEG00000021177) zgc:162898 (ENSAPEG00000021209) Clown anemonefish MODERN SPECIES 1514 hexa (ENSAOCG00000016836) arih1 (ENSAOCG00000001167) ENSAOCG00000016954 ppcdc (ENSAOCG00000016978) hacd3 (ENSAOCG00000017010) #22 ints14 (ENSAOCG00000017070) #23 SLC24A1 (ENSAOCG00000017229) #24 SLC24A1 (ENSAOCG00000017271) #24 ENSAOCG00000017453 ##25 Spiny chromis MODERN SPECIES 6 CA12 (ENSAPOG00000006900) MAN2C1 (ENSAPOG00000006998) neil1 (ENSAPOG00000007020) commd4 (ENSAPOG00000007030) sema7a (ENSAPOG00000007069) islr2 (ENSAPOG00000007082) stra6 (ENSAPOG00000007157) ENSAPOG00000007178 cyp11a1.1 (ENSAPOG00000007214) stoml1 (ENSAPOG00000007241) nr2e3 (ENSAPOG00000007343) hexa (ENSAPOG00000007374) arih1 (ENSAPOG00000007442) ENSAPOG00000007458 ppcdc (ENSAPOG00000007489) hacd3 (ENSAPOG00000007552) #22 ints14 (ENSAPOG00000007621) #23 SLC24A1 (ENSAPOG00000007942) #24 SLC24A1 (ENSAPOG00000008141) #24 ENSAPOG00000008269 ##25 ENSAPOG00000008421 ##27 map2k1 (ENSAPOG00000008515) #31 rpl4 (ENSAPOG00000008471) #33 zwilch (ENSAPOG00000008541) #34 LCTL (ENSAPOG00000008616) #35 snapc5 (ENSAPOG00000008638) #32 smad6b (ENSAPOG00000008675) #36 smad3b (ENSAPOG00000008731) #37 aagab (ENSAPOG00000008748) iqch (ENSAPOG00000008805) zgc:162898 (ENSAPOG00000008823) Bicolor damselfish MODERN SPECIES 317 ENSSPAG00000018019 ENSSPAG00000018039 neil1 (ENSSPAG00000018067) commd4 (ENSSPAG00000018089) sema7a (ENSSPAG00000018133) islr2 (ENSSPAG00000018158) stra6 (ENSSPAG00000018165) ENSSPAG00000018213 cyp11a1.1 (ENSSPAG00000018244) stoml1 (ENSSPAG00000018284) nr2e3 (ENSSPAG00000018358) hexa (ENSSPAG00000018566) arih1 (ENSSPAG00000018619) ENSSPAG00000018683 ppcdc (ENSSPAG00000018714) hacd3 (ENSSPAG00000018731) #22 ints14 (ENSSPAG00000018803) #23 SLC24A1 (ENSSPAG00000018853) #24 SLC24A1 (ENSSPAG00000018871) #24 ENSSPAG00000018896 ##25 ENSSPAG00000018936 ##27 map2k1 (ENSSPAG00000018984) #31 rpl4 (ENSSPAG00000019006) #33 zwilch (ENSSPAG00000019063) #34 LCTL (ENSSPAG00000019086) #35 snapc5 (ENSSPAG00000019113) #32 smad6b (ENSSPAG00000019122) #36 smad3b (ENSSPAG00000019142) #37 aagab (ENSSPAG00000019178) iqch (ENSSPAG00000019195) zgc:162898 (ENSSPAG00000019226) Cichlidae ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C.b ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C.b ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Nile tilapia MODERN SPECIES 19 CA12 (ENSONIG00000015363) MAN2C1 (ENSONIG00000015370) neil1 (ENSONIG00000015377) commd4 (ENSONIG00000015379) sema7a (ENSONIG00000015382) ENSONIG00000031360 islr2 (ENSONIG00000020970) stra6 (ENSONIG00000015383) ENSONIG00000015388 cyp11a1.1 (ENSONIG00000015391) nr2e3 (ENSONIG00000015396) hexa (ENSONIG00000015399) arih1 (ENSONIG00000015404) ENSONIG00000038771 ppcdc (ENSONIG00000015408) hacd3 (ENSONIG00000015409) #22 ints14 (ENSONIG00000015414) #23 ENSONIG00000042969 #24 SLC24A1 (ENSONIG00000015416) #24 ENSONIG00000015421 ##25 ENSONIG00000015428 ##27 ENSONIG00000034322 map2k1 (ENSONIG00000041722) #31 rpl4 (ENSONIG00000015438) #33 zwilch (ENSONIG00000015453) #34 LCTL (ENSONIG00000015457) #35 snapc5 (ENSONIG00000015460) #32 smad6 (ENSONIG00000027979) #36 smad3b (ENSONIG00000015464) #37 aagab (ENSONIG00000039374) iqch (ENSONIG00000015469) Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C.b ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Haplochromini ANCESTRAL SPECIES ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C.b ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b.a #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Haplochromini_A ANCESTRAL SPECIES 1 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C.b ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b.a #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Haplochromini_B ANCESTRAL SPECIES 28 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C.b ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b.a #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Zebra mbuna MODERN SPECIES 1110 ENSMZEG00005022516 CA12 (ENSMZEG00005022519) MAN2C1 (ENSMZEG00005022527) neil1 (ENSMZEG00005022536) commd4 (ENSMZEG00005022541) sema7a (ENSMZEG00005022544) islr2 (ENSMZEG00005022548) stra6 (ENSMZEG00005022550) cyp11a1.1 (ENSMZEG00005022555) stoml1 (ENSMZEG00005022560) nr2e3 (ENSMZEG00005022568) hexa (ENSMZEG00005022579) arih1 (ENSMZEG00005022582) ENSMZEG00005022585 ppcdc (ENSMZEG00005022599) hacd3 (ENSMZEG00005022607) #22 ints14 (ENSMZEG00005022613) #23 SLC24A1 (ENSMZEG00005022618) #24 ENSMZEG00005022627 ##25 ENSMZEG00005022640 ##27 map2k1 (ENSMZEG00005022643) #31 rpl4 (ENSMZEG00005022644) #33 zwilch (ENSMZEG00005022662) #34 LCTL (ENSMZEG00005022665) #35 snapc5 (ENSMZEG00005022673) #32 smad6b (ENSMZEG00005022680) #36 smad3b (ENSMZEG00005022682) #37 aagab (ENSMZEG00005022686) iqch (ENSMZEG00005022693) zgc:162898 (ENSMZEG00005022698) skor1b (ENSMZEG00005022702) Eastern happy MODERN SPECIES 19 CA12 (ENSACLG00000017374) MAN2C1 (ENSACLG00000017213) neil1 (ENSACLG00000017173) commd4 (ENSACLG00000017140) sema7a (ENSACLG00000017086) islr2 (ENSACLG00000017072) stra6 (ENSACLG00000017044) ENSACLG00000017028 cyp11a1.1 (ENSACLG00000016892) stoml1 (ENSACLG00000016876) nr2e3 (ENSACLG00000016858) hexa (ENSACLG00000016825) arih1 (ENSACLG00000016725) ENSACLG00000016653 ppcdc (ENSACLG00000016456) hacd3 (ENSACLG00000016337) #22 ints14 (ENSACLG00000016244) #23 SLC24A1 (ENSACLG00000016209) #24 ENSACLG00000015789 ##25 ENSACLG00000015528 ##27 map2k1 (ENSACLG00000015490) #31 rpl4 (ENSACLG00000015376) #33 zwilch (ENSACLG00000015306) #34 LCTL (ENSACLG00000015185) #35 snapc5 (ENSACLG00000015178) #32 smad6b (ENSACLG00000015060) #36 smad3b (ENSACLG00000015005) #37 aagab (ENSACLG00000014966) iqch (ENSACLG00000014950) zgc:162898 (ENSACLG00000014936) skor1b (ENSACLG00000014916) P. nyererei MODERN SPECIES 330 ENSPNYG00000012816 CA12 (ENSPNYG00000012827) MAN2C1 (ENSPNYG00000012842) neil1 (ENSPNYG00000012897) commd4 (ENSPNYG00000012913) sema7a (ENSPNYG00000012941) islr2 (ENSPNYG00000012974) stra6 (ENSPNYG00000013022) ENSPNYG00000013118 cyp11a1.1 (ENSPNYG00000013158) stoml1 (ENSPNYG00000013273) nr2e3 (ENSPNYG00000013295) hexa (ENSPNYG00000013367) arih1 (ENSPNYG00000013404) ENSPNYG00000013487 hacd3 (ENSPNYG00000013539) #22 ints14 (ENSPNYG00000013587) #23 SLC24A1 (ENSPNYG00000013638) #24 ENSPNYG00000013709 ##25 ENSPNYG00000013766 ##27 ENSPNYG00000013866 map2k1 (ENSPNYG00000014012) #31 rpl4 (ENSPNYG00000014038) #33 zwilch (ENSPNYG00000014254) #34 LCTL (ENSPNYG00000014382) #35 snapc5 (ENSPNYG00000014419) #32 smad6b (ENSPNYG00000014464) #36 smad3b (ENSPNYG00000014483) #37 aagab (ENSPNYG00000014514) iqch (ENSPNYG00000014565) zgc:162898 (ENSPNYG00000014663) Burton s mouthbrooder MODERN SPECIES 368 CA12 (ENSHBUG00000014064) MAN2C1 (ENSHBUG00000014037) neil1 (ENSHBUG00000013915) commd4 (ENSHBUG00000013910) sema7a (ENSHBUG00000013895) islr2 (ENSHBUG00000013882) stra6 (ENSHBUG00000013870) ENSHBUG00000013854 cyp11a1.1 (ENSHBUG00000013842) stoml1 (ENSHBUG00000013845) nr2e3 (ENSHBUG00000013798) hexa (ENSHBUG00000013611) arih1 (ENSHBUG00000013587) ENSHBUG00000013489 ppcdc (ENSHBUG00000013452) hacd3 (ENSHBUG00000013444) #22 ints14 (ENSHBUG00000013409) #23 SLC24A1 (ENSHBUG00000013345) #24 ENSHBUG00000013307 ##25 ENSHBUG00000013075 ##27 ENSHBUG00000012853 map2k1 (ENSHBUG00000012769) #31 rpl4 (ENSHBUG00000012721) #33 zwilch (ENSHBUG00000012704) #34 LCTL (ENSHBUG00000012695) #35 snapc5 (ENSHBUG00000012617) #32 smad6b (ENSHBUG00000012608) #36 ENSHBUG00000012576 #37 Lyretail cichlid MODERN SPECIES 305 CA12 (ENSNBRG00000017306) MAN2C1 (ENSNBRG00000017224) ENSNBRG00000017209 neil1 (ENSNBRG00000017196) commd4 (ENSNBRG00000017154) sema7a (ENSNBRG00000017117) stra6 (ENSNBRG00000017079) ENSNBRG00000017050 cyp11a1.1 (ENSNBRG00000017032) stoml1 (ENSNBRG00000017016) nr2e3 (ENSNBRG00000016989) hexa (ENSNBRG00000016965) arih1 (ENSNBRG00000016929) ENSNBRG00000016913 ppcdc (ENSNBRG00000016756) hacd3 (ENSNBRG00000016668) #22 ints14 (ENSNBRG00000016618) #23 SLC24A1 (ENSNBRG00000016597) #24 ENSNBRG00000016316 ##25 ENSNBRG00000016229 ENSNBRG00000016155 ##27 map2k1 (ENSNBRG00000016125) #31 rpl4 (ENSNBRG00000015986) #33 zwilch (ENSNBRG00000015874) #34 LCTL (ENSNBRG00000015831) #35 snapc5 (ENSNBRG00000015818) #32 smad6b (ENSNBRG00000015802) #36 smad3b (ENSNBRG00000015781) #37 aagab (ENSNBRG00000015745) iqch (ENSNBRG00000015611) zgc:162898 (ENSNBRG00000015586) Midas cichlid MODERN SPECIES 385 CA12 (ENSACIG00000002627) MAN2C1 (ENSACIG00000002745) neil1 (ENSACIG00000002796) commd4 (ENSACIG00000002831) sema7a (ENSACIG00000002846) islr2 (ENSACIG00000002865) stra6 (ENSACIG00000002885) ENSACIG00000002930 cyp11a1.1 (ENSACIG00000002952) stoml1 (ENSACIG00000002988) nr2e3 (ENSACIG00000003032) hexa (ENSACIG00000003137) arih1 (ENSACIG00000003347) ENSACIG00000003474 ppcdc (ENSACIG00000003479) hacd3 (ENSACIG00000003504) #22 ints14 (ENSACIG00000003523) #23 SLC24A1 (ENSACIG00000003557) #24 ENSACIG00000003590 ##25 ENSACIG00000003648 ##27 map2k1 (ENSACIG00000003699) #31 rpl4 (ENSACIG00000003731) #33 zwilch (ENSACIG00000003822) #34 LCTL (ENSACIG00000003960) #35 snapc5 (ENSACIG00000004004) #32 smad6b (ENSACIG00000004032) #36 smad3b (ENSACIG00000004048) #37 aagab (ENSACIG00000004078) iqch (ENSACIG00000004210) zgc:162898 (ENSACIG00000004275) skor1b (ENSACIG00000004288) Atherinomorphae ANCESTRAL SPECIES 5 ENSGT00940000169460 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Oryzias ANCESTRAL SPECIES 16 ENSGT00940000169460 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516.q ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Oryzias_a ANCESTRAL SPECIES 1 ENSGT00940000169460 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516.q ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000015942 ENSGT00940000158440.g.b Japanese Medaka HdrR MODERN SPECIES 20 usp3 (ENSORLG00000007352) si:dkeyp-73b11.8 (ENSORLG00000023180) CA12 (ENSORLG00000007332) MAN2C1 (ENSORLG00000007320) neil1 (ENSORLG00000007274) commd4 (ENSORLG00000007253) sema7a (ENSORLG00000007240) islr2 (ENSORLG00000007233) stra6 (ENSORLG00000007226) cyp11a (ENSORLG00000007190) nr2e3 (ENSORLG00000007175) hexa (ENSORLG00000007169) arih1 (ENSORLG00000007132) ENSORLG00000007094 ppcdc (ENSORLG00000007090) hacd3 (ENSORLG00000007078) #22 ints14 (ENSORLG00000007056) #23 ENSORLG00000028299 #24 ENSORLG00000026631 SLC24A1 (ENSORLG00000007029) #24 ENSORLG00000007022 ##25 ENSORLG00000006997 ##27 map2k1 (ENSORLG00000006926) #31 rpl4 (ENSORLG00000006882) #33 zwilch (ENSORLG00000006863) #34 LCTL (ENSORLG00000006840) #35 ENSORLG00000025403 smad6b (ENSORLG00000006825) #36 smad3b (ENSORLG00000006803) #37 aagab (ENSORLG00000006754) zgc:162898 (ENSORLG00000006741) Chinese medaka MODERN SPECIES 766 si:dkeyp-73b11.8 (ENSOSIG00000021342) CA12 (ENSOSIG00000021346) MAN2C1 (ENSOSIG00000021353) neil1 (ENSOSIG00000021355) commd4 (ENSOSIG00000021362) sema7a (ENSOSIG00000021366) islr2 (ENSOSIG00000021367) stra6 (ENSOSIG00000021369) cyp11a1.1 (ENSOSIG00000021390) stoml1 (ENSOSIG00000021479) nr2e3 (ENSOSIG00000021481) hexa (ENSOSIG00000021507) arih1 (ENSOSIG00000021861) ENSOSIG00000021931 ppcdc (ENSOSIG00000021935) hacd3 (ENSOSIG00000021945) #22 ints14 (ENSOSIG00000022003) #23 ENSOSIG00000022075 #24 SLC24A1 (ENSOSIG00000022079) #24 ENSOSIG00000022109 ##25 ENSOSIG00000022181 ##27 map2k1 (ENSOSIG00000022353) #31 rpl4 (ENSOSIG00000022390) #33 zwilch (ENSOSIG00000022469) #34 LCTL (ENSOSIG00000022490) #35 snapc5 (ENSOSIG00000022501) #32 smad6b (ENSOSIG00000022504) #36 smad6b (ENSOSIG00000022510) #36 zgc:162898 (ENSOSIG00000000720) skor1b (ENSOSIG00000000726) PIAS1 (ENSOSIG00000000776) Oryzias_b ANCESTRAL SPECIES ENSGT00940000169460 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516.q ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Indian medaka MODERN SPECIES 15 si:dkeyp-73b11.8 (ENSOMEG00000022308) CA12 (ENSOMEG00000022269) MAN2C1 (ENSOMEG00000022198) neil1 (ENSOMEG00000022177) commd4 (ENSOMEG00000022164) sema7a (ENSOMEG00000022146) islr2 (ENSOMEG00000022120) stra6 (ENSOMEG00000022103) cyp11a1.1 (ENSOMEG00000022047) stoml1 (ENSOMEG00000021948) nr2e3 (ENSOMEG00000021925) hexa (ENSOMEG00000021908) arih1 (ENSOMEG00000021871) ENSOMEG00000021811 ppcdc (ENSOMEG00000021783) hacd3 (ENSOMEG00000021745) #22 ints14 (ENSOMEG00000021715) #23 ENSOMEG00000021660 #24 SLC24A1 (ENSOMEG00000021596) #24 ENSOMEG00000021522 ##25 ENSOMEG00000021299 ##27 map2k1 (ENSOMEG00000021273) #31 rpl4 (ENSOMEG00000021252) #33 zwilch (ENSOMEG00000021191) #34 LCTL (ENSOMEG00000021112) #35 snapc5 (ENSOMEG00000021026) #32 rps23 (ENSOMEG00000020987) ENSOMEG00000020930 ENSOMEG00000020915 pde12 (ENSOMEG00000020900) gmppb (ENSOMEG00000020863) Javanese ricefish MODERN SPECIES 20 usp3 (ENSOJAG00000018072) si:dkeyp-73b11.8 (ENSOJAG00000018029) CA12 (ENSOJAG00000018022) MAN2C1 (ENSOJAG00000017859) neil1 (ENSOJAG00000017851) commd4 (ENSOJAG00000017847) sema7a (ENSOJAG00000017835) islr2 (ENSOJAG00000017826) stra6 (ENSOJAG00000017706) cyp11a1.1 (ENSOJAG00000017367) nr2e3 (ENSOJAG00000017186) hexa (ENSOJAG00000015950) arih1 (ENSOJAG00000015474) ENSOJAG00000015447 ppcdc (ENSOJAG00000015440) hacd3 (ENSOJAG00000015219) #22 ints14 (ENSOJAG00000014921) #23 ENSOJAG00000014816 #24 SLC24A1 (ENSOJAG00000014806) #24 ENSOJAG00000014599 ##25 ENSOJAG00000013786 ##27 map2k1 (ENSOJAG00000013527) #31 rpl4 (ENSOJAG00000013399) #33 zwilch (ENSOJAG00000013246) #34 smad6b (ENSOJAG00000013057) #36 smad3b (ENSOJAG00000012829) #37 aagab (ENSOJAG00000012590) iqch (ENSOJAG00000012524) zgc:162898 (ENSOJAG00000012513) skor1b (ENSOJAG00000012503) PIAS1 (ENSOJAG00000012338) Cyprinodontiformes ANCESTRAL SPECIES 6 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Aplocheiloidei ANCESTRAL SPECIES 1 ENSGT00940000169460 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Mangrove rivulus MODERN SPECIES 6 si:dkeyp-73b11.8 (ENSKMAG00000018597) CA12 (ENSKMAG00000018610) MAN2C1 (ENSKMAG00000018638) neil1 (ENSKMAG00000018738) commd4 (ENSKMAG00000018762) sema7a (ENSKMAG00000018795) islr2 (ENSKMAG00000018821) stra6 (ENSKMAG00000018839) cyp11a1.1 (ENSKMAG00000018869) stoml1 (ENSKMAG00000018954) nr2e3 (ENSKMAG00000018965) hexa (ENSKMAG00000019076) arih1 (ENSKMAG00000019124) ENSKMAG00000019164 ppcdc (ENSKMAG00000019178) hacd3 (ENSKMAG00000019204) #22 ints14 (ENSKMAG00000019255) #23 ENSKMAG00000019281 #24 SLC24A1 (ENSKMAG00000019301) #24 ENSKMAG00000019332 ##25 ENSKMAG00000019409 ##27 map2k1 (ENSKMAG00000019462) #31 rpl4 (ENSKMAG00000019520) #33 zwilch (ENSKMAG00000019558) #34 LCTL (ENSKMAG00000019610) #35 snapc5 (ENSKMAG00000019691) #32 smad6b (ENSKMAG00000019704) #36 smad3b (ENSKMAG00000019721) #37 aagab (ENSKMAG00000019751) iqch (ENSKMAG00000019782) zgc:162898 (ENSKMAG00000019840) Turquoise killifish MODERN SPECIES 1622 ELAVL1 (ENSNFUG00015010628) ENSNFUG00015010623 TMEM259 (ENSNFUG00015010543) MAN2C1 (ENSNFUG00015010412) neil1 (ENSNFUG00015010400) COMMD4 (ENSNFUG00015010389) sema7a (ENSNFUG00015010368) islr2 (ENSNFUG00015010359) STRA6 (ENSNFUG00015010256) ENSNFUG00015010235 stoml1 (ENSNFUG00015010068) hexa (ENSNFUG00015009436) arih1 (ENSNFUG00015008852) ENSNFUG00015008829 ppcdc (ENSNFUG00015008823) hacd3 (ENSNFUG00015008677) #22 VWA9 (ENSNFUG00015008651) #23 SLC24A1 (ENSNFUG00015008646) #24 DENND4A (ENSNFUG00015008588) ##25 MEGF11 (ENSNFUG00015008461) ##27 MAP2K1 (ENSNFUG00015008325) #31 rpl4 (ENSNFUG00015008298) #33 ZWILCH (ENSNFUG00015008272) #34 LCTL (ENSNFUG00015008241) #35 snapc5 (ENSNFUG00015008236) #32 ENSNFUG00015008234 ENSNFUG00015008231 smad6b (ENSNFUG00015008229) #36 AAGAB (ENSNFUG00015008222) iqch (ENSNFUG00015008218) zgc:162898 (ENSNFUG00015008213) Cyprinodontoidei ANCESTRAL SPECIES 7 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 NAME_4 ANCESTRAL SPECIES 239 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 Sheepshead minnow MODERN SPECIES 1234 ENSCVAG00000017859 ENSCVAG00000017876 cyp11a1.1 (ENSCVAG00000018994) stoml1 (ENSCVAG00000019065) nr2e3 (ENSCVAG00000019105) hexa (ENSCVAG00000019285) arih1 (ENSCVAG00000019348) ENSCVAG00000019361 ppcdc (ENSCVAG00000019390) hacd3 (ENSCVAG00000019445) #22 ints14 (ENSCVAG00000019509) #23 ENSCVAG00000019518 #24 SLC24A1 (ENSCVAG00000019525) #24 ENSCVAG00000019665 ##25 ENSCVAG00000019731 ##27 Mummichog MODERN SPECIES 427 cyp11a1.1 (ENSFHEG00000004800) stoml1 (ENSFHEG00000004814) nr2e3 (ENSFHEG00000004863) hexa (ENSFHEG00000004895) arih1 (ENSFHEG00000004916) ENSFHEG00000004953 ppcdc (ENSFHEG00000004978) hacd3 (ENSFHEG00000005033) #22 ints14 (ENSFHEG00000005072) #23 ENSFHEG00000005166 #24 SLC24A1 (ENSFHEG00000005221) #24 ENSFHEG00000005229 ##25 ENSFHEG00000005284 ##27 map2k1 (ENSFHEG00000005313) #31 rpl4 (ENSFHEG00000005347) #33 zwilch (ENSFHEG00000005364) #34 LCTL (ENSFHEG00000005394) #35 snapc5 (ENSFHEG00000005401) #32 Poeciliinae ANCESTRAL SPECIES 3 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Poecilia ANCESTRAL SPECIES 5 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 NAME_6 ANCESTRAL SPECIES 38 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Amazon molly MODERN SPECIES 332 usp3 (ENSPFOG00000005634) ENSPFOG00000005738 ENSPFOG00000022767 neil1 (ENSPFOG00000005744) commd4 (ENSPFOG00000005797) sema7a (ENSPFOG00000005805) islr2 (ENSPFOG00000006027) stra6 (ENSPFOG00000006050) cyp11a1.1 (ENSPFOG00000006301) stoml1 (ENSPFOG00000006419) nr2e3 (ENSPFOG00000006516) hexa (ENSPFOG00000006640) arih1 (ENSPFOG00000006732) ENSPFOG00000006845 ppcdc (ENSPFOG00000006856) hacd3 (ENSPFOG00000006915) #22 ints14 (ENSPFOG00000006991) #23 ENSPFOG00000023612 #24 SLC24A1 (ENSPFOG00000007134) #24 ENSPFOG00000007336 ##25 ENSPFOG00000007620 ##27 map2k1 (ENSPFOG00000008205) #31 rpl4 (ENSPFOG00000008365) #33 zwilch (ENSPFOG00000008447) #34 LCTL (ENSPFOG00000008595) #35 snapc5 (ENSPFOG00000021667) #32 smad6b (ENSPFOG00000008775) #36 smad3b (ENSPFOG00000008802) #37 aagab (ENSPFOG00000008893) iqch (ENSPFOG00000008947) zgc:162898 (ENSPFOG00000009031) Sailfin molly MODERN SPECIES 1071 sema7a (ENSPLAG00000018864) islr2 (ENSPLAG00000018854) stra6 (ENSPLAG00000018841) cyp11a1.1 (ENSPLAG00000018795) stoml1 (ENSPLAG00000018773) nr2e3 (ENSPLAG00000018760) hexa (ENSPLAG00000018689) arih1 (ENSPLAG00000018325) ENSPLAG00000018299 ppcdc (ENSPLAG00000018268) hacd3 (ENSPLAG00000018238) #22 ints14 (ENSPLAG00000018192) #23 ENSPLAG00000018144 #24 SLC24A1 (ENSPLAG00000018133) #24 ENSPLAG00000018106 ##25 Guppy MODERN SPECIES 458 ENSPREG00000009480 CA12 (ENSPREG00000009520) MAN2C1 (ENSPREG00000009619) neil1 (ENSPREG00000009683) commd4 (ENSPREG00000009697) sema7a (ENSPREG00000009720) ENSPREG00000009748 #24 stra6 (ENSPREG00000009762) cyp11a1.1 (ENSPREG00000009807) stoml1 (ENSPREG00000009837) nr2e3 (ENSPREG00000009907) hexa (ENSPREG00000009965) arih1 (ENSPREG00000010115) ENSPREG00000010149 ppcdc (ENSPREG00000010163) hacd3 (ENSPREG00000010177) #22 ints14 (ENSPREG00000010197) #23 ENSPREG00000010239 #24 ENSPREG00000010304 ##25 ENSPREG00000010362 ##27 map2k1 (ENSPREG00000010418) #31 rpl4 (ENSPREG00000010449) #33 zwilch (ENSPREG00000010534) #34 LCTL (ENSPREG00000010570) #35 snapc5 (ENSPREG00000010651) #32 smad6b (ENSPREG00000010660) #36 smad3b (ENSPREG00000010683) #37 aagab (ENSPREG00000010705) iqch (ENSPREG00000010718) zgc:162898 (ENSPREG00000010732) skor1b (ENSPREG00000010750) Platyfish MODERN SPECIES 11 usp3 (ENSXMAG00000003362) ENSXMAG00000021406 CA12 (ENSXMAG00000003380) MAN2C1 (ENSXMAG00000015918) neil1 (ENSXMAG00000015912) commd4 (ENSXMAG00000015911) sema7a (ENSXMAG00000023435) stra6 (ENSXMAG00000015883) cyp11a1.1 (ENSXMAG00000015863) stoml1 (ENSXMAG00000015850) nr2e3 (ENSXMAG00000015842) hexa (ENSXMAG00000028285) arih1 (ENSXMAG00000015819) ENSXMAG00000022800 ppcdc (ENSXMAG00000015812) hacd3 (ENSXMAG00000015797) #22 ints14 (ENSXMAG00000015780) #23 ENSXMAG00000015778 #24 SLC24A1 (ENSXMAG00000015769) #24 ENSXMAG00000003464 ##25 ENSXMAG00000003498 ##27 map2k1 (ENSXMAG00000003499) #31 rpl4 (ENSXMAG00000029529) #33 zwilch (ENSXMAG00000003532) #34 LCTL (ENSXMAG00000003540) #35 snapc5 (ENSXMAG00000003549) #32 smad6b (ENSXMAG00000003550) #36 smad3b (ENSXMAG00000003553) #37 aagab (ENSXMAG00000003564) iqch (ENSXMAG00000003568) zgc:162898 (ENSXMAG00000022123) Pinecone sodierfish MODERN SPECIES 20 MAN2C1 (ENSMMDG00005011318) neil1 (ENSMMDG00005011310) commd4 (ENSMMDG00005011270) sema7a (ENSMMDG00005011266) ENSMMDG00005011262 islr2 (ENSMMDG00005011261) islr2 (ENSMMDG00005011258) stra6 (ENSMMDG00005011236) cyp11a1.1 (ENSMMDG00005010401) stoml1 (ENSMMDG00005010381) nr2e3 (ENSMMDG00005010313) hexa (ENSMMDG00005010279) arih1 (ENSMMDG00005010264) ENSMMDG00005010261 ppcdc (ENSMMDG00005010260) hacd3 (ENSMMDG00005010257) #22 ints14 (ENSMMDG00005010242) #23 SLC24A1 (ENSMMDG00005010216) #24 ENSMMDG00005010200 ##25 ENSMMDG00005010191 ##27 map2k1 (ENSMMDG00005010104) #31 rpl4 (ENSMMDG00005009927) #33 zwilch (ENSMMDG00005009915) #34 LCTL (ENSMMDG00005009714) #35 snapc5 (ENSMMDG00005009708) #32 smad6b (ENSMMDG00005009705) #36 smad3b (ENSMMDG00005009590) #37 aagab (ENSMMDG00005009566) iqch (ENSMMDG00005009565) zgc:162898 (ENSMMDG00005009564) skor1b (ENSMMDG00005009562) Cod MODERN SPECIES 22 si:dkeyp-73b11.8 (ENSGMOG00000008319) CA12 (ENSGMOG00000008322) MAN2C1 (ENSGMOG00000008323) neil1 (ENSGMOG00000023007) commd4 (ENSGMOG00000008328) sema7a (ENSGMOG00000008331) islr2 (ENSGMOG00000008332) stra6 (ENSGMOG00000008334) ENSGMOG00000008336 cyp11a1.1 (ENSGMOG00000008338) nr2e3 (ENSGMOG00000008342) hexa (ENSGMOG00000008345) arih1 (ENSGMOG00000008347) ENSGMOG00000036344 ppcdc (ENSGMOG00000008350) hacd3 (ENSGMOG00000008351) #22 ints14 (ENSGMOG00000008352) #23 SLC24A1 (ENSGMOG00000024598) #24 ENSGMOG00000008354 ##25 ENSGMOG00000036396 ENSGMOG00000008355 #26 ENSGMOG00000008356 ##27 map2k1 (ENSGMOG00000008358) #31 rpl4 (ENSGMOG00000008359) #33 zwilch (ENSGMOG00000008360) #34 LCTL (ENSGMOG00000008361) #35 snapc5 (ENSGMOG00000036981) #32 smad6b (ENSGMOG00000008363) #36 smad3b (ENSGMOG00000029371) #37 aagab (ENSGMOG00000008365) zgc:162898 (ENSGMOG00000008367) Protacanthopterygii ANCESTRAL SPECIES 10 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744.t.b ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.A ##25 ENSGT00940000154914.wb #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b.j #36 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Salmoninae ANCESTRAL SPECIES 271 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00390000003748 ENSGT00940000157850 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00940000158358.a ENSGT00940000160967.e.d ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT00940000155836.A ##25 ENSGT00940000154914.wb #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145 #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331 #32 ENSGT00940000158146.b.j #36 ENSGT00940000153499.b.b.d.a.b.g #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00940000158440.g.b.g.b ENSGT01030000234539.a.a.b.a.b.a.b.c.b Huchen MODERN SPECIES 9706 ENSHHUG00000007697 #22 Salmoninae_a ANCESTRAL SPECIES 9 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b.d ENSGT00390000003748 ENSGT00940000157850 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00940000158358.a ENSGT00940000160967.e.d ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT00940000155836.A ##25 ENSGT00940000154914.wb.b #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145.q #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331.k.a #32 ENSGT00940000158146.b.j #36 ENSGT00940000153499.b.b.d.a.b.g #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00940000158440.g.b.g.b ENSGT01030000234539.a.a.b.a.b.a.b.c.b Oncorhynchus ANCESTRAL SPECIES 90 ENSGT00940000153424.a.a.c.b.d ENSGT00390000003748 ENSGT00940000157850 ENSGT01030000234953.d ENSGT01100000264496 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00940000158358.a ENSGT00940000160967.e.d ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107.n ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT00940000155836.A ##25 ENSGT00940000154914.wb.b #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145.q #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331.k.a #32 ENSGT00940000158146.b.j #36 ENSGT00940000153499.b.b.d.a.b.g #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00940000158440.g.b.g.b ENSGT01030000234539.a.a.b.a.b.a.b.c.b Oncorhynchus_a ANCESTRAL SPECIES 115 ENSGT00940000153424.a.a.c.b.d ENSGT00390000003748 ENSGT00940000157850 ENSGT01030000234953.d ENSGT01100000264496 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00940000158358.a ENSGT00940000160967.e.d ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107.n ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT00940000155836.A ##25 ENSGT00940000154914.wb.b #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145.q #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00390000010331.k.a #32 ENSGT00390000010331.l #32 ENSGT00940000158146.b.j #36 Coho salmon MODERN SPECIES 1 usp3 (ENSOKIG00005013832) ENSOKIG00005014949 ENSOKIG00005014964 ENSOKIG00005014975 CA12 (ENSOKIG00005014986) MAN2C1 (ENSOKIG00005015148) ENSOKIG00005018089 neil1 (ENSOKIG00005018095) sema7a (ENSOKIG00005018119) islr2 (ENSOKIG00005018126) stra6 (ENSOKIG00005018139) ENSOKIG00005018210 stoml1 (ENSOKIG00005018220) ARIH1 (ENSOKIG00005018296) ppcdc (ENSOKIG00005018398) hacd3 (ENSOKIG00005018449) #22 ints14 (ENSOKIG00005018507) #23 ENSOKIG00005018559 ENSOKIG00005018622 ##25 rab11a (ENSOKIG00005018981) #26 ENSOKIG00005019075 ##27 ENSOKIG00005019846 ENSOKIG00005019852 ENSOKIG00005019867 ENSOKIG00005019877 ENSOKIG00005019888 map2k1 (ENSOKIG00005019896) #31 rpl4 (ENSOKIG00005019951) #33 zwilch (ENSOKIG00005020066) #34 LCTL (ENSOKIG00005020135) #35 snapc5 (ENSOKIG00005020275) #32 Chinook salmon MODERN SPECIES 525 ENSOTSG00005023570 hacd3 (ENSOTSG00005023572) #22 ints14 (ENSOTSG00005023573) #23 ENSOTSG00005023574 ##25 Rainbow trout MODERN SPECIES 22 ENSOMYG00000070598 ENSOMYG00000060982 ENSOMYG00000050383 CA12 (ENSOMYG00000015551) ENSOMYG00000015565 neil1 (ENSOMYG00000015576) sema7a (ENSOMYG00000015585) islr2 (ENSOMYG00000056245) stra6 (ENSOMYG00000015816) ENSOMYG00000067561 ENSOMYG00000057849 ENSOMYG00000050176 stoml1 (ENSOMYG00000015767) ENSOMYG00000058050 ppcdc (ENSOMYG00000023939) ENSOMYG00000048541 #22 ints14 (ENSOMYG00000015775) #23 ENSOMYG00000051025 ##25 rab11a (ENSOMYG00000028574) #26 map2k1 (ENSOMYG00000070762) #31 rpl4 (ENSOMYG00000015672) #33 zwilch (ENSOMYG00000064330) #34 LCTL (ENSOMYG00000051376) #35 snapc5 (ENSOMYG00000026529) #32 smad6b (ENSOMYG00000035050) #36 ENSOMYG00000074334 ENSOMYG00000055253 smad3b (ENSOMYG00000040088) #37 ENSOMYG00000023824 iqch (ENSOMYG00000073930) skor1b (ENSOMYG00000015835) Salmo ANCESTRAL SPECIES 91 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b.d ENSGT00390000003748 ENSGT00940000157850 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00940000158358.a ENSGT00940000160967.e.d ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT00940000155836.A ##25 ENSGT00940000154914.wb.b #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #31 ENSGT00390000018145.q #33 ENSGT00390000013696 #34 ENSGT00940000157369.a #35 ENSGT00940000180676 ENSGT00940000158146.b.j #36 ENSGT00940000153499.b.b.d.a.b.g #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00940000158440.g.b.g.b ENSGT01030000234539.a.a.b.a.b.a.b.c.b River trout MODERN SPECIES 33 fbxl22 (ENSSTUG00000016337) usp3 (ENSSTUG00000015799) ENSSTUG00000015713 CA12 (ENSSTUG00000015698) MAN2C1 (ENSSTUG00000015308) ENSSTUG00000015251 neil1 (ENSSTUG00000015239) sema7a (ENSSTUG00000015219) islr2 (ENSSTUG00000015212) stra6 (ENSSTUG00000015174) stoml1 (ENSSTUG00000015155) arih1l (ENSSTUG00000015055) ppcdc (ENSSTUG00000015044) ENSSTUG00000015031 ENSSTUG00000015027 hacd3 (ENSSTUG00000014954) #22 ints14 (ENSSTUG00000014861) #23 ENSSTUG00000014342 ##25 RAB11B (ENSSTUG00000014285) ENSSTUG00000014230 ##27 map2k1 (ENSSTUG00000014171) #31 rpl4 (ENSSTUG00000014130) #33 zwilch (ENSSTUG00000014067) #34 LCTL (ENSSTUG00000013900) #35 ENSSTUG00000013877 ENSSTUG00000013846 smad6b (ENSSTUG00000013843) #36 smad3b (ENSSTUG00000013733) #37 aagab (ENSSTUG00000013689) iqch (ENSSTUG00000013633) ENSSTUG00000009581 Atlantic salmon MODERN SPECIES 15 usp3 (ENSSSAG00000108007) ENSSSAG00000106997 ENSSSAG00000085885 ENSSSAG00000118913 ENSSSAG00000090937 ENSSSAG00000008687 ENSSSAG00000115163 ENSSSAG00000098331 ENSSSAG00000098361 islr2 (ENSSSAG00000098188) stra6 (ENSSSAG00000103656) ENSSSAG00000009328 stoml1 (ENSSSAG00000009303) ENSSSAG00000098010 ppcdc (ENSSSAG00000010656) hacd3 (ENSSSAG00000009344) #22 ints14 (ENSSSAG00000106122) #23 ENSSSAG00000009435 ##25 rab11a (ENSSSAG00000083201) #26 ENSSSAG00000086055 ##27 map2k1 (ENSSSAG00000073424) #31 rpl4 (ENSSSAG00000008596) #33 zwilch (ENSSSAG00000008578) #34 LCTL (ENSSSAG00000073442) #35 snapc5 (ENSSSAG00000102443) #32 ENSSSAG00000073427 ENSSSAG00000117817 smad6 (ENSSSAG00000073418) #36 smad3b (ENSSSAG00000115090) #37 aagab (ENSSSAG00000082892) iqch (ENSSSAG00000073414) Northern pike MODERN SPECIES 18 commd4 (ENSELUG00000003435) sema7a (ENSELUG00000000113) ENSELUG00000033859 islr2 (ENSELUG00000029779) islr2 (ENSELUG00000025122) stra6 (ENSELUG00000000108) pycr1b (ENSELUG00000030476) ENSELUG00000026709 cyp11a1.1 (ENSELUG00000003333) stoml1 (ENSELUG00000003307) nr2e3 (ENSELUG00000003264) hexa (ENSELUG00000003240) ARIH1 (ENSELUG00000003198) ENSELUG00000003161 ppcdc (ENSELUG00000003138) hacd3 (ENSELUG00000003118) #22 ints14 (ENSELUG00000003084) #23 SLC24A1 (ENSELUG00000003062) #24 ENSELUG00000003043 ##25 rab11a (ENSELUG00000025088) #26 ENSELUG00000002960 ##27 ENSELUG00000030296 map2k1 (ENSELUG00000002907) #31 ENSELUG00000002918 rpl4 (ENSELUG00000002885) #33 zwilch (ENSELUG00000002833) #34 ENSELUG00000029781 ENSELUG00000025180 LCTL (ENSELUG00000002819) #35 ENSELUG00000029160 ENSELUG00000032451 Osteoglossiformes ANCESTRAL SPECIES 68 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00390000006367.d ENSGT00940000171216 ENSGT01050000244951.a.b.a.a.g.b ENSGT00940000160055 ENSGT00940000155948.b.a ENSGT00940000154910.b.b ENSGT00530000063472.b.b.a.b.a.a.h ENSGT00940000155960.b ENSGT00390000006758.b ENSGT00940000157402 ENSGT00950000182976.a.b ENSGT00440000037417.A P. kingsleyae MODERN SPECIES 10 idh3a (ENSPKIG00000000910) lrrc61 (ENSPKIG00000000874) CIB2 (ENSPKIG00000000834) SH2D7 (ENSPKIG00000000795) TBC1D2B (ENSPKIG00000000735) ENSPKIG00000000674 HERC1 (ENSPKIG00000000569) ENSPKIG00000000525 usp3 (ENSPKIG00000000507) ENSPKIG00000000496 CA12 (ENSPKIG00000000437) aph1b (ENSPKIG00000000382) stra6 (ENSPKIG00000000355) NR2E3 (ENSPKIG00000000334) ARIH1 (ENSPKIG00000024243) hacd3 (ENSPKIG00000024214) #22 ints14 (ENSPKIG00000024198) #23 SLC24A1 (ENSPKIG00000024187) #24 dennd4a (ENSPKIG00000024083) #25 far1 (ENSPKIG00000024015) PPFIBP2 (ENSPKIG00000023879) OLFML1 (ENSPKIG00000023812) SYT9 (ENSPKIG00000023797) spon1a (ENSPKIG00000023766) ENSPKIG00000023742 hipk3b (ENSPKIG00000023694) cstf3 (ENSPKIG00000023648) tcp11l1 (ENSPKIG00000023633) depdc7a (ENSPKIG00000023604) QSER1 (ENSPKIG00000023573) prrg4 (ENSPKIG00000023558) Asian bonytongue MODERN SPECIES 2 lrrc61 (ENSSFOG00015021415) CIB2 (ENSSFOG00015021440) ENSSFOG00015021456 TBC1D2B (ENSSFOG00015021474) ENSSFOG00015021507 HERC1 (ENSSFOG00015021579) ENSSFOG00015030343 usp3 (ENSSFOG00015021659) CA12 (ENSSFOG00015021689) aph1b (ENSSFOG00015021708) islr2 (ENSSFOG00015021787) stra6 (ENSSFOG00015021736) NR2E3 (ENSSFOG00015021798) arih1 (ENSSFOG00015021813) ENSSFOG00015021832 hacd3 (ENSSFOG00015021847) #22 ints14 (ENSSFOG00015021873) #23 SLC24A1 (ENSSFOG00015021891) #24 dennd4a (ENSSFOG00015021905) #25 far1 (ENSSFOG00015021951) sb:cb470 (ENSSFOG00015030305) PPFIBP2 (ENSSFOG00015021994) OLFML1 (ENSSFOG00015022031) SYT9 (ENSSFOG00015022038) spon1a (ENSSFOG00015022054) hipk3b (ENSSFOG00015022090) cstf3 (ENSSFOG00015022133) tcp11l1 (ENSSFOG00015022158) depdc7a (ENSSFOG00015022174) QSER1 (ENSSFOG00015022192) prrg4 (ENSSFOG00015022201) Spotted gar MODERN SPECIES 669 terb2 (ENSLOCG00000013718) ENSLOCG00000013720 sord (ENSLOCG00000013722) DUOX2 (ENSLOCG00000013727) DUOXA2 (ENSLOCG00000013747) GOLM2 (ENSLOCG00000013752) ctdspl2a (ENSLOCG00000013760) ENSLOCG00000013765 ENSLOCG00000013767 eif3ja (ENSLOCG00000013769) cilp (ENSLOCG00000013772) #17 ENSLOCG00000013774 parp16 (ENSLOCG00000013778) #18 IGDCC3 (ENSLOCG00000013782) #19 IGDCC4 (ENSLOCG00000013791) #20 hacd3 (ENSLOCG00000013803) #22 ints14 (ENSLOCG00000013812) #23 SLC24A1 (ENSLOCG00000013820) #24 dennd4a (ENSLOCG00000013827) #25 rab11a (ENSLOCG00000013835) #26 ENSLOCG00000013837 #27 dis3l (ENSLOCG00000013846) #28 tipin (ENSLOCG00000013854) #29 map2k1 (ENSLOCG00000013858) #31 rpl4 (ENSLOCG00000013867) #33 zwilch (ENSLOCG00000013873) #34 lctla (ENSLOCG00000013878) #35 crybgx (ENSLOCG00000013888) snapc5 (ENSLOCG00000013891) #32 smad6a (ENSLOCG00000013892) #36 smad3b (ENSLOCG00000013897) #37 Reedfish MODERN SPECIES 8 rbpms2b (ENSECRG00000021907) psma4 (ENSECRG00000021960) skic8 (ENSECRG00000021976) crabp1b (ENSECRG00000021993) ENSECRG00000022005 cpeb1b (ENSECRG00000022018) ENSECRG00000022030 ENSECRG00000022044 sin3aa (ENSECRG00000022057) ubl7a (ENSECRG00000022069) CHRNA3 (ENSECRG00000022109) cilp (ENSECRG00000022196) #17 parp16 (ENSECRG00000022209) #18 IGDCC3 (ENSECRG00000022218) #19 IGDCC4 (ENSECRG00000022233) #20 hacd3 (ENSECRG00000022248) #22 ints14 (ENSECRG00000016954) #23 SLC24A1 (ENSECRG00000016985) #24 dennd4a (ENSECRG00000017079) #25 ENSECRG00000017309 ENSECRG00000017340 ENSECRG00000017450 #27 dis3l (ENSECRG00000017497) #28 tipin (ENSECRG00000017552) #29 map2k1 (ENSECRG00000017617) #31 rpl4 (ENSECRG00000017761) #33 zwilch (ENSECRG00000017849) #34 lctla (ENSECRG00000017984) #35 crybgx (ENSECRG00000018775) snapc5 (ENSECRG00000018817) #32 smad6a (ENSECRG00000018835) #36 Elephant shark MODERN SPECIES 1490 BLOC1S6 (ENSCMIG00000018887) sqor (ENSCMIG00000018881) mibp2 (ENSCMIG00000018877) ENSCMIG00000018874 SPPL2A (ENSCMIG00000018858) trpm7 (ENSCMIG00000018835) USP50 (ENSCMIG00000018807) USP8 (ENSCMIG00000018799) gabpb1 (ENSCMIG00000018784) zgc:158482 (ENSCMIG00000018766) gatm (ENSCMIG00000018754) pde8a (ENSCMIG00000018732) ENSCMIG00000018718 ENSCMIG00000018715 HOMER2 (ENSCMIG00000018710) hacd3 (ENSCMIG00000018702) #22 ints14 (ENSCMIG00000018688) #23 SLC24A1 (ENSCMIG00000018682) #24 dennd4a (ENSCMIG00000018666) #25 rab11a (ENSCMIG00000018649) #26 MEGF11 (ENSCMIG00000018640) #27 dis3l (ENSCMIG00000018578) #28 tipin (ENSCMIG00000018527) #29 map2k1 (ENSCMIG00000018523) #31 zwilch (ENSCMIG00000018499) #34 rpl4 (ENSCMIG00000018485) #33 lctla (ENSCMIG00000018484) #35 crybgx (ENSCMIG00000018479) ENSCMIG00000018477 #32 si:ch211-107o10.3 (ENSCMIG00000018476) ENSCMIG00000018474 Cyclostomata ANCESTRAL SPECIES ENSGT00530000062962.b.a #22 Hagfish MODERN SPECIES 70 ENSEBUG00000010302 ENSEBUG00000007263 ENSEBUG00000010521 alg2 (ENSEBUG00000016209) ENSEBUG00000003783 ENSEBUG00000005385 ENSEBUG00000005969 #22 ENSEBUG00000016261 pwp2h (ENSEBUG00000003140) dnaja3a (ENSEBUG00000010459) coro7 (ENSEBUG00000006541) ENSEBUG00000011911 ENSEBUG00000001361 ENSEBUG00000005057 ENSEBUG00000008269 ENSEBUG00000006754 ENSEBUG00000012576 ENSEBUG00000004802 ENSEBUG00000014758 ENSEBUG00000005334 ENSEBUG00000015425 nutf2l (ENSEBUG00000004510) Vertebrata ANCESTRAL SPECIES ENSGT00530000062962.b.b ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00530000062962.b.b ##22 Lamprey MODERN SPECIES 26 ENSPMAG00000002227 gjd6 (ENSPMAG00000002232) ENSPMAG00000002233 BNC1 (ENSPMAG00000002267) ENSPMAG00000002276 ENSPMAG00000002287 ##22 ENSPMAG00000002292 #10 yjefn3 (ENSPMAG00000002302) CILP2 (ENSPMAG00000002309) ##17 ENSPMAG00000002318 Hagfish MODERN SPECIES 489 ENSEBUG00000007225 ENSEBUG00000014048 ENSEBUG00000016752 ENSEBUG00000007336 ENSEBUG00000002321 ENSEBUG00000012208 ENSEBUG00000006517 ENSEBUG00000011006 ENSEBUG00000006529 ##22 ENSEBUG00000008473 ENSEBUG00000006861 ENSEBUG00000012623 Gnathostomata ANCESTRAL SPECIES 359 ENSGT00940000160194 ENSGT00950000182991.B ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.f ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 Euteleostomi ANCESTRAL SPECIES 522 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 Actinopterygii ANCESTRAL SPECIES 119 ENSGT00730000114722 ENSGT00940000163435 ENSGT00390000004945 ENSGT00940000156986 ENSGT00390000012666 ENSGT00940000159492 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a ENSGT00390000017246 ENSGT00940000157347 ENSGT00390000011081 ENSGT00940000161010 ENSGT00940000156228 ENSGT00940000167973 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00910000147694 ENSGT00940000156306 ENSGT00390000008787.a ENSGT00940000158926 ENSGT00940000158625 ENSGT00390000001670 ENSGT00940000153169.A.b.b ENSGT00940000156660 ENSGT00390000013285 ENSGT00940000156721 ENSGT00940000153745.b Neopterygii ANCESTRAL SPECIES 74 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT00390000002721 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00950000182938.b.b.b.a.b.a ENSGT00390000017246 ENSGT00940000157347 ENSGT00390000011081.q.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00910000147694 ENSGT00940000156306 ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b ENSGT00940000158006 ENSGT00550000074944 ENSGT00940000158695 ENSGT00890000139482 ENSGT00940000153246.a.a.b ENSGT00530000063506.A ENSGT00530000063555.A.a.a Osteoglossocephalai ANCESTRAL SPECIES 76 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00950000182938.b.b.b.a.b.a ENSGT00390000017246 ENSGT00940000157347 ENSGT00390000011081.q.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00910000147694 ENSGT00940000156306 ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b ENSGT00940000158006 ENSGT00550000074944 ENSGT00940000158695 ENSGT00890000139482 ENSGT00940000153246.a.a.b ENSGT00940000154658.b.i.b ENSGT00940000157174.c Clupeocephala ANCESTRAL SPECIES 208 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00940000156306 ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b ENSGT00940000158006 ENSGT00550000074944 ENSGT00940000157910 ENSGT00940000156243 ENSGT00940000159642.e ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b Otomorpha ANCESTRAL SPECIES 145 ENSGT00940000155658 ENSGT00730000112044 ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00530000063821.b.b ENSGT00940000155397.a.b ENSGT00390000014293.a ENSGT00940000155429.a.a ENSGT00990000204039 ENSGT00940000156990 ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Clupeiformes ANCESTRAL SPECIES 226 ENSGT00940000155658 ENSGT00730000112044 ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00530000063821.b.b ENSGT00940000155397.a.b ENSGT00390000014293.a ENSGT00940000155429.a.a ENSGT00990000204039 ENSGT00940000156990 ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Atlantic herring MODERN SPECIES 9 H2AZ1 (ENSCHAG00000002270) ENSCHAG00000002410 RASGRP2 (ENSCHAG00000002534) ENSCHAG00000003065 ENSCHAG00000003097 NRXN2 (ENSCHAG00000003236) ENSCHAG00000006527 ENSCHAG00000006540 ENSCHAG00000006560 ENSCHAG00000006594 ENSCHAG00000006621 ENSCHAG00000006663 ENSCHAG00000006671 kirrel1a (ENSCHAG00000006715) ndufs2 (ENSCHAG00000007869) hacd4 (ENSCHAG00000010111) ##22 ENSCHAG00000010170 mllt3 (ENSCHAG00000011337) ENSCHAG00000011371 ENSCHAG00000011377 ENSCHAG00000011404 slc1a1 (ENSCHAG00000011423) ENSCHAG00000011744 ENSCHAG00000011774 ENSCHAG00000011789 ENSCHAG00000011803 ENSCHAG00000011821 ENSCHAG00000011840 ENSCHAG00000011848 ENSCHAG00000011863 ADRA2C (ENSCHAG00000011932) Denticle herring MODERN SPECIES larp7 (ENSDCDG00000030079) plin2 (ENSDCDG00000030074) haus6 (ENSDCDG00000030053) DENND4C (ENSDCDG00000029771) ACER2 (ENSDCDG00000029759) ENSDCDG00000029756 ENSDCDG00000029754 ACO1 (ENSDCDG00000029709) sepsecs (ENSDCDG00000029683) lgi2a (ENSDCDG00000029679) dock11 (ENSDCDG00000023096) ENSDCDG00000022950 kirrel1a (ENSDCDG00000022254) ndufs2 (ENSDCDG00000021552) fcer1g (ENSDCDG00000021546) hacd4 (ENSDCDG00000021545) ##22 ENSDCDG00000020315 mllt3 (ENSDCDG00000020307) C4orf54 (ENSDCDG00000020306) trmt10a (ENSDCDG00000020305) spata6l (ENSDCDG00000020304) slc1a1 (ENSDCDG00000018776) RAP1GDS1 (ENSDCDG00000018603) tspan5a (ENSDCDG00000018556) ENSDCDG00000018547 frem1a (ENSDCDG00000018530) ENSDCDG00000018519 SYNPO2 (ENSDCDG00000018518) USP53 (ENSDCDG00000018506) ENSDCDG00000018501 MYOZ2 (ENSDCDG00000018492) Otophysi ANCESTRAL SPECIES 208 ENSGT01070000254383 ENSGT00510000047760 ENSGT00390000013368 ENSGT00600000085600 ENSGT00950000182899.C.b ENSGT00940000167021 ENSGT00390000005094.h ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000155658 ENSGT00730000112044 ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00940000157535.m.a ENSGT00940000159031 ENSGT00530000067688 ENSGT00940000157122.b.a ENSGT00390000002245 ENSGT00940000164407.b Characiphysae ANCESTRAL SPECIES 19 ENSGT00390000013368 ENSGT00600000085600 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00940000167021 ENSGT00390000005094.h ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000155658 ENSGT00730000112044.a ENSGT00730000112044.b ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.b ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00940000157535.m.a ENSGT00940000159031 ENSGT00530000067688 ENSGT00940000157122.b.a ENSGT00390000002245 ENSGT00940000164407.b ENSGT01100000263568.b.a.c.b.b.b ENSGT00940000166658.b ENSGT00390000014237 ENSGT00940000157482.e ENSGT00600000084617 Channel catfish MODERN SPECIES 26 zgc:112271 (ENSIPUG00000019184) slx1b (ENSIPUG00000019176) ENSIPUG00000019155 ENSIPUG00000019147 ENSIPUG00000019135 ENSIPUG00000019081 ENSIPUG00000019051 amdhd1 (ENSIPUG00000019028) snrpf (ENSIPUG00000018994) ntn4 (ENSIPUG00000018955) dock11 (ENSIPUG00000018875) ENSIPUG00000018866 KIRREL (ENSIPUG00000018766) ndufs2 (ENSIPUG00000018738) fcer1g (ENSIPUG00000018728) hacd4 (ENSIPUG00000018721) ##22 focad (ENSIPUG00000018654) ENSIPUG00000018632 ENSIPUG00000018617 ENSIPUG00000018610 ENSIPUG00000018595 trmt10a (ENSIPUG00000018586) pvrl4 (ENSIPUG00000018565) coro1b (ENSIPUG00000018532) ENSIPUG00000018526 dtx4a (ENSIPUG00000018511) msantd1 (ENSIPUG00000018500) ENSIPUG00000018479 ENSIPUG00000018460 ENSIPUG00000018450 ENSIPUG00000018439 Characiphysae_b ANCESTRAL SPECIES 18 ENSGT00390000013368 ENSGT00600000085600 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00940000167021 ENSGT00390000005094.h ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000155658 ENSGT00730000112044.a ENSGT00730000112044.b ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.b ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00940000157535.m.a ENSGT00940000159031 ENSGT00530000067688 ENSGT00940000157122.b.a ENSGT00390000002245 ENSGT00940000164407.b ENSGT01100000263568.b.a.c.b.b.b ENSGT00940000166658.b ENSGT00390000014237 ENSGT00940000157482.e ENSGT00600000084617 Characoidei ANCESTRAL SPECIES 9 ENSGT00510000047760 ENSGT00390000013368 ENSGT00600000085600 ENSGT00950000182899.C.b ENSGT00940000167021 ENSGT00390000005094.h ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000155658 ENSGT00730000112044.a ENSGT00730000112044.b ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.b ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00940000157535.m.a ENSGT00940000159031 ENSGT00530000067688 ENSGT00940000157122.b.a ENSGT00390000002245 ENSGT00940000164407.b Red-bellied piranha MODERN SPECIES 341 ENSPNAG00000019399 ENSPNAG00000019364 ENSPNAG00000019239 ENSPNAG00000019172 amdhd1 (ENSPNAG00000019140) snrpf (ENSPNAG00000019117) ntn4 (ENSPNAG00000019079) dock11 (ENSPNAG00000019040) il13ra1 (ENSPNAG00000018591) il13ra1 (ENSPNAG00000006647) kirrel1a (ENSPNAG00000003536) ndufs2 (ENSPNAG00000005744) fcer1g (ENSPNAG00000005743) hacd4 (ENSPNAG00000018448) ##22 ENSPNAG00000018426 mllt3 (ENSPNAG00000018389) ENSPNAG00000018342 trmt10a (ENSPNAG00000018333) ENSPNAG00000018302 coro1b (ENSPNAG00000018240) ENSPNAG00000018192 dtx4a (ENSPNAG00000005460) msantd1 (ENSPNAG00000018103) ENSPNAG00000018087 ENSPNAG00000018041 Mexicana tetra MODERN SPECIES 7 KCNIP4 (ENSAMXG00000002428) ENSAMXG00000030994 ADGRA3 (ENSAMXG00000002446) gba3 (ENSAMXG00000002452) PPARGC1A (ENSAMXG00000002461) ENSAMXG00000043979 ntn4 (ENSAMXG00000007434) dock11 (ENSAMXG00000007450) il13ra1 (ENSAMXG00000007475) ENSAMXG00000044091 ENSAMXG00000029236 il13ra1 (ENSAMXG00000030064) kirrel1a (ENSAMXG00000011544) ndufs2 (ENSAMXG00000039771) fcer1g (ENSAMXG00000030191) hacd4 (ENSAMXG00000037245) ##22 FOCAD (ENSAMXG00000011494) mllt3 (ENSAMXG00000038404) ENSAMXG00000037906 trmt10a (ENSAMXG00000040069) ENSAMXG00000011426 coro1b (ENSAMXG00000040145) dtx4a (ENSAMXG00000011382) msantd1 (ENSAMXG00000011368) ENSAMXG00000011336 rpl34 (ENSAMXG00000035416) trmt44 (ENSAMXG00000011302) GPR78 (ENSAMXG00000029754) CPZ (ENSAMXG00000011274) ostc (ENSAMXG00000011265) etnppl (ENSAMXG00000011256) Electric eel MODERN SPECIES 277 hacd4 (ENSEEEG00000016630) ##22 FOCAD (ENSEEEG00000016638) ENSEEEG00000016671 ENSEEEG00000016672 mllt3 (ENSEEEG00000016674) trmt10a (ENSEEEG00000016677) ENSEEEG00000016680 coro1b (ENSEEEG00000016684) dtx4a (ENSEEEG00000016687) msantd1 (ENSEEEG00000016689) ENSEEEG00000016691 map4k2 (ENSEEEG00000016698) men1 (ENSEEEG00000016703) rtn3 (ENSEEEG00000016705) ZFTA (ENSEEEG00000016710) ecsit (ENSEEEG00000016711) Cyprinoidei ANCESTRAL SPECIES 14 ENSGT00390000006227 ENSGT01030000234638.b.a.b ENSGT00600000085600.a ENSGT00950000182899.C.b ENSGT00940000167021 ENSGT00390000005094.h ENSGT00390000008645 ENSGT00940000154818.c.b ENSGT00940000154818.c.a ENSGT00940000156615.a ENSGT00940000155658 ENSGT00730000112044 ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265.a ENSGT00530000062962.b.b ##22 ENSGT00940000163460.c.c.a.a.b ENSGT00390000004438 ENSGT00940000155903 ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00940000157535.m.a ENSGT00940000159031 ENSGT00530000067688 ENSGT00940000157122.b.a ENSGT00390000002245 ENSGT00940000164407.b ENSGT01100000263495.E ENSGT00940000156819.b ENSGT00940000156996.f.a.b ENSGT00390000004124.j Cyprininae ANCESTRAL SPECIES 1 ENSGT00940000162428.n.a.a ENSGT00530000063506.B.m ENSGT00940000160134.i ENSGT00940000155384.b.b.b ENSGT00390000002849.f ENSGT00390000006227.b ENSGT00940000154818.c.a ENSGT00940000156615.a.h ENSGT00940000155658.i ENSGT00730000112044.c.a ENSGT00940000155795.f.a ENSGT00390000009529.c ENSGT01090000260265.a.b ENSGT00940000163460.c.c.a.a.a.a.a ENSGT01030000235195.a.a.b ENSGT00530000062962.b.b ##22 ENSGT00940000163460.c.c.a.a.b ENSGT00390000004438 ENSGT00940000155903.d.a ENSGT00730000111645.a.a ENSGT00530000063169.a.o ENSGT00940000157535.m.a.c ENSGT00940000159031.w ENSGT00940000157122.b.a.m.b ENSGT00390000002245.f ENSGT00940000164407.b.d ENSGT01100000263495.E.t ENSGT00940000156819.b.e Goldfish DUPLICATION Goldfish MODERN SPECIES 538 il13ra1 (ENSCARG00000060566) kirrel1a (ENSCARG00000060719) ndufs2 (ENSCARG00000061408) fcer1g (ENSCARG00000062622) ENSCARG00000062643 hacd4 (ENSCARG00000062646) ##22 ENSCARG00000062726 mllt3 (ENSCARG00000064629) Goldfish MODERN SPECIES 25 oxa1l (ENSCARG00000062789) slc7a7 (ENSCARG00000062928) ENSCARG00000063286 CCNB1IP1 (ENSCARG00000063313) ttc5 (ENSCARG00000063337) ENSCARG00000063526 ENSCARG00000063544 snrpf (ENSCARG00000063555) dock11 (ENSCARG00000063972) il13ra1 (ENSCARG00000068797) kirrel1a (ENSCARG00000068820) ndufs2 (ENSCARG00000068937) fcer1g (ENSCARG00000069388) ENSCARG00000069392 ENSCARG00000069393 hacd4 (ENSCARG00000069401) ##22 ENSCARG00000014867 mllt3 (ENSCARG00000016390) C4orf54 (ENSCARG00000016406) trmt10a (ENSCARG00000016415) ENSCARG00000016435 coro1b (ENSCARG00000016440) dtx4a (ENSCARG00000016451) msantd1 (ENSCARG00000016458) ENSCARG00000016469 znf16l (ENSCARG00000016504) ENSCARG00000016513 ENSCARG00000016545 nitr4a (ENSCARG00000016550) ENSCARG00000016590 ENSCARG00000016606 Cyprininae_a ANCESTRAL SPECIES 56 ENSGT00940000162428.n.a.a ENSGT00530000063506.B.m ENSGT00940000160134.i ENSGT00940000155384.b.b.b ENSGT00390000002849.f ENSGT00390000006227.b ENSGT00940000154818.c.a ENSGT00940000156615.a.h ENSGT00940000155658.i ENSGT00730000112044.c.a ENSGT00940000155795.f.a ENSGT00390000009529.c ENSGT01090000260265.a.b ENSGT00940000163460.c.c.a.a.a.a.a ENSGT01030000235195.a.a.b ENSGT00530000062962.b.b ##22 ENSGT00940000163460.c.c.a.a.b ENSGT00390000004438 ENSGT00940000155903.d.b ENSGT00940000155903.c ENSGT00530000063169.a.o ENSGT00530000063169.a.p ENSGT00940000157535.m.a.d ENSGT00940000159031.x ENSGT00940000157122.b.a.m.a ENSGT00390000002245.e ENSGT00940000164407.b.c.a ENSGT01100000263495.E.s ENSGT00940000156819.b.f ENSGT00940000156996.f.a.b.f ENSGT00390000004124.j.k Common carp reference MODERN SPECIES 6 oxa1l (ENSCCRG00000028571) ENSCCRG00000054717 ENSCCRG00000033133 ENSCCRG00000033049 ENSCCRG00000052932 snrpf (ENSCCRG00000074793) ntn4 (ENSCCRG00000062275) dock11 (ENSCCRG00000046886) il13ra1 (ENSCCRG00000000691) il13ra1 (ENSCCRG00000077415) kirrel1a (ENSCCRG00000027714) ndufs2 (ENSCCRG00000073072) fcer1g (ENSCCRG00000075761) ENSCCRG00000007670 ENSCCRG00000065539 hacd4 (ENSCCRG00000082126) ##22 zgc:194252 (ENSCCRG00000033879) ENSCCRG00000033330 mllt3 (ENSCCRG00000036651) ENSCCRG00000063642 ENSCCRG00000074112 ENSCCRG00000027692 ENSCCRG00000053126 dtx4a (ENSCCRG00000027681) msantd1 (ENSCCRG00000027677) ENSCCRG00000027673 ENSCCRG00000027656 znf16l (ENSCCRG00000027646) ENSCCRG00000079632 cd248a (ENSCCRG00000063147) ENSCCRG00000027529 Zebrafish MODERN SPECIES 22 MAN2B2 (ENSDARG00000079463) ENSDARG00000100946 si:ch211-212k18.8 (ENSDARG00000086421) ENSDARG00000055504 ENSDARG00000088656 ENSDARG00000036575 amdhd1 (ENSDARG00000007366) snrpf (ENSDARG00000105037) ntn4 (ENSDARG00000102066) dock11 (ENSDARG00000062485) il13ra1 (ENSDARG00000080020) kirrel1a (ENSDARG00000001634) ndufs2 (ENSDARG00000007526) fcer1g (ENSDARG00000103276) ENSDARG00000111708 hacd4 (ENSDARG00000102221) ##22 zgc:194252 (ENSDARG00000057142) ENSDARG00000022020 mllt3 (ENSDARG00000006754) C7H4orf54 (ENSDARG00000098379) trmt10a (ENSDARG00000036678) ENSDARG00000077419 coro1b (ENSDARG00000008660) ENSDARG00000099518 dtx4a (ENSDARG00000076302) msantd1 (ENSDARG00000078801) ENSDARG00000009610 znf16l (ENSDARG00000105532) ENSDARG00000067925 cd248a (ENSDARG00000103713) RCE1 (ENSDARG00000077909) Euteleosteomorpha ANCESTRAL SPECIES 183 ENSGT00940000153289.a.a.b ENSGT00940000157772 ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00940000156306 ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b ENSGT00940000158006 ENSGT00550000074944 ENSGT00940000158215 ENSGT00390000008250 ENSGT00950000182920.b.a.b.a.a ENSGT00390000007252.c ENSGT00940000154949.b ENSGT01100000263573.a.a.b Acanthomorphata ANCESTRAL SPECIES 222 ENSGT00390000000527 ENSGT00940000162334 ENSGT00940000157772 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a Euacanthomorphacea ANCESTRAL SPECIES 17 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00390000000527 ENSGT00940000162334 ENSGT00940000157772 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Percomorphaceae ANCESTRAL SPECIES 39 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Percomorphaceae_B ANCESTRAL SPECIES 19 ENSGT00940000153395.a ENSGT00940000159954 ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000180421 ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Percomorphaceae_C ANCESTRAL SPECIES 20 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000180421 ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Percomorphaceae_D ANCESTRAL SPECIES 20 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000180421 ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Carangaria ANCESTRAL SPECIES 20 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000180421 ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a Pleuronectoidei ANCESTRAL SPECIES 17 ENSGT00940000159954 ENSGT00940000159769.a.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000180421 ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00940000172047 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a ENSGT00940000157258 Tongue sole MODERN SPECIES ANK2 (ENSCSEG00000018198) ACO1 (ENSCSEG00000018262) DNMT3B (ENSCSEG00000018277) PAQR9 (ENSCSEG00000018284) ENSCSEG00000018286 frem1a (ENSCSEG00000018293) RAP1GDS1 (ENSCSEG00000018328) ENSCSEG00000018336 slc1a1 (ENSCSEG00000018344) spata6l (ENSCSEG00000018372) trmt10a (ENSCSEG00000018378) ENSCSEG00000018382 ENSCSEG00000018395 ENSCSEG00000018399 C4orf54 (ENSCSEG00000018405) hacd4 (ENSCSEG00000018410) ##22 ENSCSEG00000018417 mllt3 (ENSCSEG00000018464) H2AZ1 (ENSCSEG00000018489) ENSCSEG00000018501 ADAM33 (ENSCSEG00000018523) ENSCSEG00000018542 trappc14 (ENSCSEG00000018568) gal3st4 (ENSCSEG00000018579) ENSCSEG00000018580 ENSCSEG00000018606 ENSCSEG00000018732 PELI3 (ENSCSEG00000018740) RCE1 (ENSCSEG00000018936) ENSCSEG00000018943 AP1S1 (ENSCSEG00000018947) Turbot MODERN SPECIES ENSSMAG00000005108 cab39l (ENSSMAG00000005071) cdadc1 (ENSSMAG00000005048) rcbtb1 (ENSSMAG00000004983) ENSSMAG00000004940 tubgcp3 (ENSSMAG00000004863) ENSSMAG00000004696 ENSSMAG00000004680 arhgef7b (ENSSMAG00000004589) ENSSMAG00000004428 ENSSMAG00000004318 ENSSMAG00000004291 ENSSMAG00000004288 ENSSMAG00000023417 ENSSMAG00000004263 ENSSMAG00000004253 ##22 ENSSMAG00000004036 ENSSMAG00000004009 ENSSMAG00000003983 ENSSMAG00000003714 rwdd (ENSSMAG00000003737) ENSSMAG00000003759 ENSSMAG00000003768 ENSSMAG00000003777 ENSSMAG00000003781 ENSSMAG00000003790 ENSSMAG00000003841 ENSSMAG00000009095 ENSSMAG00000021486 ENSSMAG00000009089 ENSSMAG00000009084 Carangaria_A ANCESTRAL SPECIES 41 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b ENSGT00940000155306.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a Barramundi perch MODERN SPECIES 287 ACO1 (ENSLCAG00010021627) PAQR9 (ENSLCAG00010021736) ENSLCAG00010021743 frem1a (ENSLCAG00010021751) tspan5a (ENSLCAG00010021781) RAP1GDS1 (ENSLCAG00010021802) slc1a1 (ENSLCAG00010021858) spata6l (ENSLCAG00010021871) trmt10a (ENSLCAG00010021876) ENSLCAG00010021881 C4orf54 (ENSLCAG00010021882) hacd4 (ENSLCAG00010021884) ##22 ENSLCAG00010021891 mllt3 (ENSLCAG00010021914) H2AZ1 (ENSLCAG00010021932) ENSLCAG00010021973 ENSLCAG00010021978 ENSLCAG00010021988 rwdd (ENSLCAG00010022001) ENSLCAG00010022006 ing2 (ENSLCAG00010022011) ENSLCAG00010022015 ENSLCAG00010022018 slx1b (ENSLCAG00010022024) zgc:112271 (ENSLCAG00010022028) ENSLCAG00010022043 Seriola ANCESTRAL SPECIES 64 ENSGT00940000153395.a ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000158971 ENSGT00390000015545 Yellowtail amberjack MODERN SPECIES 3056 mad2l1 (ENSSLDG00000013709) ARSJ (ENSSLDG00000013725) camk2d1 (ENSSLDG00000013740) ANK2 (ENSSLDG00000013812) ACO1 (ENSSLDG00000013952) PAQR9 (ENSSLDG00000013992) ENSSLDG00000013997 frem1a (ENSSLDG00000014018) ENSSLDG00000014071 ENSSLDG00000014092 RAP1GDS1 (ENSSLDG00000014143) slc1a1 (ENSSLDG00000014207) ENSSLDG00000014251 trmt10a (ENSSLDG00000014264) ENSSLDG00000014288 hacd4 (ENSSLDG00000014299) ##22 ENSSLDG00000014324 mllt3 (ENSSLDG00000014370) H2AZ1 (ENSSLDG00000014399) ENSSLDG00000014420 ENSSLDG00000014443 ENSSLDG00000014458 ENSSLDG00000014482 ENSSLDG00000014501 ENSSLDG00000014507 rwdd (ENSSLDG00000014523) Greater amberjack MODERN SPECIES 49 ENSSDUG00000003180 ENSSDUG00000003159 ENSSDUG00000003091 ENSSDUG00000003039 ACO1 (ENSSDUG00000002984) PAQR9 (ENSSDUG00000002972) ENSSDUG00000002958 frem1a (ENSSDUG00000002894) ENSSDUG00000002881 ENSSDUG00000002856 RAP1GDS1 (ENSSDUG00000002766) slc1a1 (ENSSDUG00000002724) spata6l (ENSSDUG00000002715) trmt10a (ENSSDUG00000002688) ENSSDUG00000002668 hacd4 (ENSSDUG00000002651) ##22 ENSSDUG00000002589 mllt3 (ENSSDUG00000002558) H2AZ1 (ENSSDUG00000002527) ENSSDUG00000002505 ENSSDUG00000002489 ENSSDUG00000002460 ENSSDUG00000002432 ENSSDUG00000002423 ENSSDUG00000002416 rwdd (ENSSDUG00000002393) Anabantaria ANCESTRAL SPECIES 19 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00980000201372 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Zig-zag eel MODERN SPECIES 9 ENSMAMG00000003180 ENSMAMG00000003089 ENSMAMG00000002963 ENSMAMG00000002915 ENSMAMG00000002904 ENSMAMG00000027140 frem1a (ENSMAMG00000002508) ENSMAMG00000002471 tspan5a (ENSMAMG00000002417) ENSMAMG00000002355 slc1a1 (ENSMAMG00000002306) ENSMAMG00000002291 ENSMAMG00000002282 ENSMAMG00000002277 ENSMAMG00000002270 hacd4 (ENSMAMG00000002249) ##22 ENSMAMG00000002155 mllt3 (ENSMAMG00000002106) ENSMAMG00000002084 ENSMAMG00000002043 ENSMAMG00000001979 rwdd (ENSMAMG00000001945) ENSMAMG00000024756 ENSMAMG00000001917 ENSMAMG00000024482 SLX1 (ENSMAMG00000025620) ENSMAMG00000001872 ENSMAMG00000025576 pygmb (ENSMAMG00000001816) sf1 (ENSMAMG00000001780) rbm4.1 (ENSMAMG00000001765) Anabantoidei ANCESTRAL SPECIES 22 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00980000201372 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a Siamese fighting fish MODERN SPECIES 10 ARSJ (ENSBSLG00000010364) camk2d1 (ENSBSLG00000008861) ACO1 (ENSBSLG00000008395) PAQR9 (ENSBSLG00000008360) ENSBSLG00000008339 frem1a (ENSBSLG00000008195) ENSBSLG00000008191 tspan5a (ENSBSLG00000008154) RAP1GDS1 (ENSBSLG00000008075) slc1a1 (ENSBSLG00000008046) spata6l (ENSBSLG00000008029) trmt10a (ENSBSLG00000008016) ENSBSLG00000008011 ENSBSLG00000007993 ENSBSLG00000007987 hacd4 (ENSBSLG00000007976) ##22 ENSBSLG00000007889 mllt3 (ENSBSLG00000007827) H2AZ1 (ENSBSLG00000007765) ENSBSLG00000007728 ENSBSLG00000007408 ADAM33 (ENSBSLG00000006874) rwdd (ENSBSLG00000006769) ENSBSLG00000006759 ing2 (ENSBSLG00000006746) ENSBSLG00000006726 ENSBSLG00000006698 ENSBSLG00000006655 ENSBSLG00000006509 slx1b (ENSBSLG00000006392) zgc:112271 (ENSBSLG00000006303) Climbing perch MODERN SPECIES 9 camk2d1 (ENSATEG00000000178) ANK2 (ENSATEG00000028978) ENSATEG00000000560 ENSATEG00000000649 ENSATEG00000000657 ENSATEG00000000719 frem1a (ENSATEG00000000746) ENSATEG00000029290 tspan5a (ENSATEG00000000935) ENSATEG00000000970 slc1a1 (ENSATEG00000001042) spata6l (ENSATEG00000028755) ENSATEG00000001123 ENSATEG00000001157 ENSATEG00000025549 hacd4 (ENSATEG00000001186) ##22 ENSATEG00000001189 mllt3 (ENSATEG00000001197) ENSATEG00000001259 ENSATEG00000001291 ENSATEG00000001304 ENSATEG00000001335 rwdd (ENSATEG00000001495) ENSATEG00000001543 ENSATEG00000001555 ENSATEG00000001569 ENSATEG00000001584 ENSATEG00000001605 BOLA2 (ENSATEG00000029758) ENSATEG00000001728 ENSATEG00000029238 Eupercaria ANCESTRAL SPECIES 19 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Tetraodontidae ANCESTRAL SPECIES 67 ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000153889.r ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT00950000182923.B.b ENSGT00390000014725.r.a ENSGT00940000156850.a.a ENSGT00940000160621 ENSGT00970000193372.a.b ENSGT00910000144784.a ENSGT00390000017407 ENSGT00940000157637.b Fugu MODERN SPECIES 20 tspan5a (ENSTRUG00000005732) RAP1GDS1 (ENSTRUG00000005313) sox19b (ENSTRUG00000005238) ENSTRUG00000004533 ENSTRUG00000004287 PELI3 (ENSTRUG00000004047) RCE1 (ENSTRUG00000003795) acox3 (ENSTRUG00000002688) ENSTRUG00000001283 ENSTRUG00000022211 SSTR4 (ENSTRUG00000001261) cd248a (ENSTRUG00000024794) ENSTRUG00000024613 slc1a1 (ENSTRUG00000000630) trmt10a (ENSTRUG00000019519) hacd4 (ENSTRUG00000028073) ##22 ENSTRUG00000032392 FOCAD (ENSTRUG00000000968) mllt3 (ENSTRUG00000001366) H2AZ1 (ENSTRUG00000033458) ENSTRUG00000001774 senp3b (ENSTRUG00000002077) EIF4A1 (ENSTRUG00000002188) mpdu1b (ENSTRUG00000022800) ENSTRUG00000022637 gal3st4 (ENSTRUG00000020160) trappc14 (ENSTRUG00000004263) ENSTRUG00000004421 ENSTRUG00000032876 serpine1 (ENSTRUG00000004818) ap1s1 (ENSTRUG00000022212) Tetraodon MODERN SPECIES 26 PURG (ENSTNIG00000001673) ENSTNIG00000001806 tpm2 (ENSTNIG00000005104) tln1 (ENSTNIG00000005103) ENSTNIG00000008388 hmgcs1 (ENSTNIG00000005102) ENSTNIG00000005086 hyal3 (ENSTNIG00000005084) amt (ENSTNIG00000005083) ifrd2 (ENSTNIG00000002348) zgc:136971 (ENSTNIG00000005082) sema3b (ENSTNIG00000005081) ENSTNIG00000005080 slc1a1 (ENSTNIG00000005078) trmt10a (ENSTNIG00000005077) hacd4 (ENSTNIG00000000968) ##22 ENSTNIG00000005076 ENSTNIG00000005075 ENSTNIG00000005058 ENSTNIG00000005057 ENSTNIG00000005056 ENSTNIG00000005055 TMEM50B (ENSTNIG00000005054) ENSTNIG00000005053 cavin1b (ENSTNIG00000005048) znf423 (ENSTNIG00000005047) shox2 (ENSTNIG00000005046) shox2 (ENSTNIG00000005045) ENSTNIG00000005044 ENSTNIG00000005043 gcm2 (ENSTNIG00000005042) Eupecaria_A ANCESTRAL SPECIES 20 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Ballan wrasse MODERN SPECIES 202 pde5ab (ENSLBEG00000013283) zcchc4 (ENSLBEG00000013353) ENSLBEG00000013399 ABLIM2 (ENSLBEG00000013428) AFAP1 (ENSLBEG00000013494) RAP1GDS1 (ENSLBEG00000013550) tspan5a (ENSLBEG00000013625) frem1a (ENSLBEG00000013674) ENSLBEG00000013803 PAQR9 (ENSLBEG00000013829) ACO1 (ENSLBEG00000013866) slc1a1 (ENSLBEG00000013947) ENSLBEG00000014003 trmt10a (ENSLBEG00000014032) ENSLBEG00000014050 hacd4 (ENSLBEG00000014068) ##22 ENSLBEG00000014253 mllt3 (ENSLBEG00000014586) H2AZ1 (ENSLBEG00000014657) ENSLBEG00000014690 ENSLBEG00000014717 ENSLBEG00000014743 Eupecaria_B ANCESTRAL SPECIES 20 ENSGT00940000159769.a.a ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Perciformes ANCESTRAL SPECIES 19 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Perciformes_a ANCESTRAL SPECIES 18 ENSGT00940000159954 ENSGT00940000159769.a.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Channel bull blenny MODERN SPECIES 9 ARSJ (ENSCGOG00000024752) ENSCGOG00000024748 ANK2 (ENSCGOG00000024701) ACO1 (ENSCGOG00000024452) ENSCGOG00000024413 ENSCGOG00000024412 ENSCGOG00000024411 frem1a (ENSCGOG00000024405) ENSCGOG00000024403 tspan5a (ENSCGOG00000024396) RAP1GDS1 (ENSCGOG00000024365) slc1a1 (ENSCGOG00000024346) ENSCGOG00000024343 trmt10a (ENSCGOG00000024342) C4orf54 (ENSCGOG00000024340) hacd4 (ENSCGOG00000024339) ##22 ENSCGOG00000024305 mllt3 (ENSCGOG00000024292) H2AZ1 (ENSCGOG00000024291) ENSCGOG00000024289 ENSCGOG00000024288 ENSCGOG00000024272 rwdd (ENSCGOG00000024269) ENSCGOG00000024267 ENSCGOG00000024264 ing2 (ENSCGOG00000024263) ENSCGOG00000024262 ENSCGOG00000024259 slx1b (ENSCGOG00000024260) zgc:112271 (ENSCGOG00000024258) ENSCGOG00000024255 Pike perch MODERN SPECIES 150 ENSSLUG00000013073 ENSSLUG00000012720 ENSSLUG00000009271 ARSJ (ENSSLUG00000009000) mad2l1 (ENSSLUG00000008991) pde5ab (ENSSLUG00000006137) zcchc4 (ENSSLUG00000005986) ABLIM2 (ENSSLUG00000005646) AFAP1 (ENSSLUG00000005580) C4orf54 (ENSSLUG00000005560) hacd4 (ENSSLUG00000005554) ##22 ENSSLUG00000005478 mllt3 (ENSSLUG00000005429) H2AZ1 (ENSSLUG00000005390) ENSSLUG00000005378 ENSSLUG00000005366 Cottioidei ANCESTRAL SPECIES 20 ENSGT00940000155475.h ENSGT00940000153395.a ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a ENSGT00940000157258 Stickleback MODERN SPECIES 417 pde5ab (ENSGACG00000000974) zcchc4 (ENSGACG00000000969) ABLIM2 (ENSGACG00000000966) AFAP1 (ENSGACG00000000961) tada2b (ENSGACG00000000960) grpel1 (ENSGACG00000000958) SORCS2 (ENSGACG00000000941) frem1a (ENSGACG00000000932) tspan5a (ENSGACG00000000929) RAP1GDS1 (ENSGACG00000000917) slc1a1 (ENSGACG00000000901) ENSGACG00000000900 trmt10a (ENSGACG00000000892) hacd4 (ENSGACG00000000890) ##22 ENSGACG00000000877 mllt3 (ENSGACG00000000874) H2AZ1 (ENSGACG00000000870) ENSGACG00000000867 ADAM33 (ENSGACG00000000862) rwdd (ENSGACG00000000853) ing2 (ENSGACG00000000852) ENSGACG00000000850 ENSGACG00000000848 slx1b (ENSGACG00000000846) zgc:112271 (ENSGACG00000000843) ENSGACG00000000840 pygmb (ENSGACG00000000827) sf1 (ENSGACG00000000826) rbm4.1 (ENSGACG00000000822) Lumpfish MODERN SPECIES 9 pde5ab (ENSCLMG00005005718) mad2l1 (ENSCLMG00005005688) ARSJ (ENSCLMG00005005666) ENSCLMG00005005601 ANK2 (ENSCLMG00005005554) ACO1 (ENSCLMG00005004953) PAQR9 (ENSCLMG00005004943) ENSCLMG00005004941 frem1a (ENSCLMG00005004935) ENSCLMG00005022994 ENSCLMG00005022993 RAP1GDS1 (ENSCLMG00005022967) slc1a1 (ENSCLMG00005022956) ENSCLMG00005022954 trmt10a (ENSCLMG00005022953) hacd4 (ENSCLMG00005022949) ##22 ENSCLMG00005022920 mllt3 (ENSCLMG00005022914) H2AZ1 (ENSCLMG00005022911) ENSCLMG00005022908 ENSCLMG00005022907 ENSCLMG00005022905 rwdd (ENSCLMG00005022903) ing2 (ENSCLMG00005022902) ENSCLMG00005022901 ENSCLMG00005022900 slx1b (ENSCLMG00005022899) zgc:112271 (ENSCLMG00005022898) ENSCLMG00005022897 pygmb (ENSCLMG00005022887) sf1 (ENSCLMG00005022886) Eupecaria_C ANCESTRAL SPECIES 20 ENSGT00940000159769.a.a ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00940000172047 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a Gilthead seabream MODERN SPECIES 1 ENSSAUG00010005443 ENSSAUG00010005450 ENSSAUG00010005459 ENSSAUG00010005469 ENSSAUG00010005474 ENSSAUG00010005479 frem1a (ENSSAUG00010005493) ENSSAUG00010005512 tspan5a (ENSSAUG00010005515) RAP1GDS1 (ENSSAUG00010005544) slc1a1 (ENSSAUG00010006532) spata6l (ENSSAUG00010007052) trmt10a (ENSSAUG00010007055) ENSSAUG00010007057 ENSSAUG00010007058 hacd4 (ENSSAUG00010007059) ##22 FOCAD (ENSSAUG00010007062) ENSSAUG00010007085 ENSSAUG00010007086 ENSSAUG00010007087 H2AZ1 (ENSSAUG00010007088) ENSSAUG00010007096 ENSSAUG00010007097 ENSSAUG00010007099 rwdd (ENSSAUG00010007863) ENSSAUG00010007865 ing2 (ENSSAUG00010007869) ENSSAUG00010007870 ENSSAUG00010007873 slx1b (ENSSAUG00010007874) zgc:112271 (ENSSAUG00010007875) Eupercaria_incertae_sedis ANCESTRAL SPECIES 43 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a European seabass MODERN SPECIES 16 mad2l1 (ENSDLAG00005028659) ARSJ (ENSDLAG00005020204) ENSDLAG00005020179 camk2d1 (ENSDLAG00005020120) ENSDLAG00005007733 ENSDLAG00005006897 ENSDLAG00005031223 frem1a (ENSDLAG00005006751) ENSDLAG00005006736 tspan5a (ENSDLAG00005006709) ENSDLAG00005006523 slc1a1 (ENSDLAG00005033872) spata6l (ENSDLAG00005029816) ENSDLAG00005005736 ENSDLAG00005005734 hacd4 (ENSDLAG00005030706) ##22 ENSDLAG00005020745 mllt3 (ENSDLAG00005020690) ENSDLAG00005020632 ENSDLAG00005020613 ENSDLAG00005020588 ENSDLAG00005020468 ENSDLAG00005020452 ENSDLAG00005020426 ENSDLAG00005029711 ENSDLAG00005020414 ENSDLAG00005033178 ENSDLAG00005020392 ENSDLAG00005020377 pygmb (ENSDLAG00005020154) ENSDLAG00005028174 Large yellow croaker MODERN SPECIES 485 SLC29A2 (ENSLCRG00005014811) S100P (ENSLCRG00005014798) ENSLCRG00005014795 kiaa0232 (ENSLCRG00005014793) TBC1D14 (ENSLCRG00005013912) ENSLCRG00005013784 ccdc96 (ENSLCRG00005013782) tada2b (ENSLCRG00005013781) grpel1 (ENSLCRG00005013780) SORCS2 (ENSLCRG00005010899) AFAP1 (ENSLCRG00005010556) ABLIM2 (ENSLCRG00005010545) ENSLCRG00005010519 zcchc4 (ENSLCRG00005010485) C4orf54 (ENSLCRG00005010483) hacd4 (ENSLCRG00005010480) ##22 ENSLCRG00005009458 mllt3 (ENSLCRG00005009330) ENSLCRG00005009307 ENSLCRG00005009256 ENSLCRG00005009193 ENSLCRG00005008499 ENSLCRG00005008427 rwdd (ENSLCRG00005008424) ENSLCRG00005008423 ENSLCRG00005008420 ing2 (ENSLCRG00005008410) cd68 (ENSLCRG00005008405) ENSLCRG00005008404 slx1b (ENSLCRG00005008403) zgc:112271 (ENSLCRG00005008391) Ovalentaria ANCESTRAL SPECIES 20 ENSGT00940000168370 ENSGT00940000155475.h ENSGT00940000153395.a ENSGT00940000159954 ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Atherinomorphae ANCESTRAL SPECIES 34 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a.l ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Cyprinodontiformes ANCESTRAL SPECIES 29 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a.l ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Aplocheiloidei ANCESTRAL SPECIES 49 ENSGT00940000153395.a ENSGT00940000159954.f ENSGT00940000155150.a ENSGT00940000155279.C.a.a.l ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a ENSGT00940000157258 ENSGT00640000091486.a Mangrove rivulus MODERN SPECIES 98 tspan5a (ENSKMAG00000005254) RAP1GDS1 (ENSKMAG00000005283) slc1a1 (ENSKMAG00000005358) ENSKMAG00000005378 trmt10a (ENSKMAG00000005389) C4orf54 (ENSKMAG00000005410) hacd4 (ENSKMAG00000005415) ##22 ENSKMAG00000005440 mllt3 (ENSKMAG00000005494) H2AZ1 (ENSKMAG00000005524) ENSKMAG00000005560 ENSKMAG00000005618 rwdd (ENSKMAG00000005646) ing2 (ENSKMAG00000005666) ENSKMAG00000005679 ENSKMAG00000005701 slx1b (ENSKMAG00000005714) zgc:112271 (ENSKMAG00000005724) ENSKMAG00000005741 pygmb (ENSKMAG00000005773) sf1 (ENSKMAG00000005854) taf6l (ENSKMAG00000005885) Turquoise killifish MODERN SPECIES 1619 NXT2 (ENSNFUG00015017088) XIAP (ENSNFUG00015017129) ENSNFUG00015017131 ENSNFUG00015017137 ACO1 (ENSNFUG00015017153) PAQR9 (ENSNFUG00015017320) FREM1A (ENSNFUG00015017335) ENSNFUG00015017434 TSPAN5 (ENSNFUG00015017446) RAP1GDS1 (ENSNFUG00015017492) SLC1A1 (ENSNFUG00015017986) trmt10a (ENSNFUG00015018101) ENSNFUG00015018108 ENSNFUG00015018111 ENSNFUG00015018147 PTPLAD2 (ENSNFUG00015019119) ##22 mllt3 (ENSNFUG00015019124) H2AFVB (ENSNFUG00015019133) ENSNFUG00015019176 rwdd (ENSNFUG00015019195) ING2 (ENSNFUG00015019202) ENSNFUG00015019217 ENSNFUG00015019224 SLX1A (ENSNFUG00015019231) ENSNFUG00015019238 pygmb (ENSNFUG00015019298) sf1 (ENSNFUG00015022028) ENSNFUG00015022064 TAF6L (ENSNFUG00015022085) cth1 (ENSNFUG00015022111) mta2 (ENSNFUG00015022120) Cyprinodontoidei ANCESTRAL SPECIES 39 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a.k.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT01030000240214 ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Poeciliinae ANCESTRAL SPECIES 28 ENSGT00940000163911.a.a.b.a.a.a.b.d.b.a ENSGT00940000174504.A.d.a ENSGT01030000234978.a.b.a ENSGT00940000174504.A.d.b ENSGT00950000182968.d.a.b.b.a.b ENSGT00950000182968.d.a.b.b.a.a ENSGT00950000182968.d.a.a.a.d.a.a.b.a.a.b.a ENSGT00940000163911.a.a.b.a.a.a.b.c ENSGT01030000234563.b.a.a ENSGT00390000005589.a.a ENSGT00940000157318 ENSGT00950000183337 ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438.k ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Poecilia ANCESTRAL SPECIES 40 ENSGT00940000162676.a.b.b.a.b ENSGT00950000182968.d.a.a.a.d.a.a.b.a.a.b.b.a.b.a ENSGT00940000162676.a.b.a ENSGT00950000182968.d.a.a.a.d.a.b ENSGT00950000182968.d.a.b.b.a.b ENSGT00950000182968.d.a.b.b.a.a ENSGT00950000182968.d.a.a.a.d.a.a.b.a.a.b.a ENSGT00940000163911.a.a.b.a.a.a.b.c ENSGT01030000234563.b.a.a ENSGT00390000005589.a.a ENSGT00940000157318 ENSGT00950000183337 ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438.k ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a NAME_6 ANCESTRAL SPECIES 573 ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 Amazon molly MODERN SPECIES 1058 trmt10a (ENSPFOG00000002833) ENSPFOG00000002796 hacd4 (ENSPFOG00000002728) ##22 Sailfin molly MODERN SPECIES 2756 C4orf54 (ENSPLAG00000011066) hacd4 (ENSPLAG00000011073) ##22 Platyfish MODERN SPECIES 5 ENSXMAG00000021358 ENSXMAG00000029404 ENSXMAG00000021221 ENSXMAG00000024595 ENSXMAG00000028834 ENSXMAG00000024868 ENSXMAG00000011347 ENSXMAG00000011349 ENSXMAG00000028347 SORCS2 (ENSXMAG00000011355) grpel1 (ENSXMAG00000011390) tada2b (ENSXMAG00000025422) ENSXMAG00000025894 trmt10a (ENSXMAG00000022944) ENSXMAG00000026553 hacd4 (ENSXMAG00000002906) ##22 ENSXMAG00000007632 mllt3 (ENSXMAG00000007644) H2AZ1 (ENSXMAG00000007658) ENSXMAG00000007661 ENSXMAG00000025606 ENSXMAG00000007684 rwdd (ENSXMAG00000007705) ENSXMAG00000024461 ing2 (ENSXMAG00000007709) ENSXMAG00000028895 ENSXMAG00000025602 slx1b (ENSXMAG00000007720) zgc:112271 (ENSXMAG00000007722) ENSXMAG00000007724 pygmb (ENSXMAG00000007739) NAME_4 ANCESTRAL SPECIES 268 ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT01030000240214 ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 Mummichog MODERN SPECIES 329 frem1a (ENSFHEG00000003024) ENSFHEG00000002992 TSPAN5 (ENSFHEG00000002978) RAP1GDS1 (ENSFHEG00000002934) slc1a1 (ENSFHEG00000000086) ENSFHEG00000002831 trmt10a (ENSFHEG00000002823) ENSFHEG00000002817 hacd4 (ENSFHEG00000002809) ##22 ENSFHEG00000002787 ENSFHEG00000000794 mllt3 (ENSFHEG00000002695) H2AZ1 (ENSFHEG00000002672) ENSFHEG00000002645 ENSFHEG00000002626 Sheepshead minnow MODERN SPECIES 1393 ENSCVAG00000001489 trmt10a (ENSCVAG00000001488) C4orf54 (ENSCVAG00000001483) hacd4 (ENSCVAG00000000056) ##22 ENSCVAG00000001475 Oryzias ANCESTRAL SPECIES 53 ENSGT00940000163911.a.a.b.a.a.a.b.b ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a.l ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a ENSGT00940000157258 Oryzias_a ANCESTRAL SPECIES 103 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000158194 ENSGT00940000177470 ENSGT00950000182899.C.b ENSGT00390000013368 ENSGT00510000047760 Chinese medaka MODERN SPECIES 1095 RAP1GDS1 (ENSOSIG00000014070) ENSOSIG00000014069 slc1a1 (ENSOSIG00000014068) ENSOSIG00000014067 trmt10a (ENSOSIG00000014065) ENSOSIG00000014062 hacd4 (ENSOSIG00000014061) ##22 ENSOSIG00000014046 ENSOSIG00000014040 ENSOSIG00000014038 ENSOSIG00000014032 Japanese Medaka HdrR MODERN SPECIES 9 ENSORLG00000011839 ENSORLG00000023749 ENSORLG00000028571 sf1 (ENSORLG00000011853) pygmb (ENSORLG00000011893) ENSORLG00000028102 ENSORLG00000024184 tspan5a (ENSORLG00000011921) RAP1GDS1 (ENSORLG00000011995) ENSORLG00000027037 ENSORLG00000028454 ENSORLG00000022029 slc1a1 (ENSORLG00000012050) trmt10a (ENSORLG00000012069) ENSORLG00000023851 hacd4 (ENSORLG00000012074) ##22 ENSORLG00000012145 ENSORLG00000026308 mllt3 (ENSORLG00000012166) H2AZ1 (ENSORLG00000022841) ENSORLG00000012217 ENSORLG00000027828 ENSORLG00000012240 rwdd (ENSORLG00000023239) ing2 (ENSORLG00000012292) ENSORLG00000012282 ENSORLG00000023573 slx1b (ENSORLG00000012306) zgc:112271 (ENSORLG00000025424) ENSORLG00000024474 ENSORLG00000028709 Oryzias_b ANCESTRAL SPECIES 37 ENSGT00950000182850.a.b.a.a ENSGT00390000012556 ENSGT00940000155475.h ENSGT00940000153395.a ENSGT00950000183067.a.a ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00940000172047 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a ENSGT00940000157258 Indian medaka MODERN SPECIES 19 ABLIM2 (ENSOMEG00000004271) zcchc4 (ENSOMEG00000004315) pde5ab (ENSOMEG00000004350) mad2l1 (ENSOMEG00000004375) AFAP1 (ENSOMEG00000004442) PAQR9 (ENSOMEG00000004455) ENSOMEG00000004458 frem1a (ENSOMEG00000004492) ENSOMEG00000004502 ENSOMEG00000004522 RAP1GDS1 (ENSOMEG00000004595) slc1a1 (ENSOMEG00000004659) spata6l (ENSOMEG00000004701) trmt10a (ENSOMEG00000004720) ENSOMEG00000004740 hacd4 (ENSOMEG00000004757) ##22 ENSOMEG00000004778 ENSOMEG00000004799 mllt3 (ENSOMEG00000004860) H2AZ1 (ENSOMEG00000004889) ENSOMEG00000004908 ENSOMEG00000004977 rwdd (ENSOMEG00000005015) ENSOMEG00000005031 ing2 (ENSOMEG00000005040) ENSOMEG00000005048 ENSOMEG00000005062 slx1b (ENSOMEG00000005075) ENSOMEG00000005088 ets2 (ENSOMEG00000005134) pygmb (ENSOMEG00000005192) Javanese ricefish MODERN SPECIES 9 TSPAN5 (ENSOJAG00000022700) ENSOJAG00000022714 ENSOJAG00000022745 PAQR9 (ENSOJAG00000022752) AFAP1 (ENSOJAG00000022763) mad2l1 (ENSOJAG00000022783) pde5ab (ENSOJAG00000022845) zcchc4 (ENSOJAG00000022997) ABLIM2 (ENSOJAG00000023009) ARSJ (ENSOJAG00000023050) camk2d1 (ENSOJAG00000023195) ANK2 (ENSOJAG00000023500) ENSOJAG00000023530 trmt10a (ENSOJAG00000023535) ENSOJAG00000023536 hacd4 (ENSOJAG00000023540) ##22 mllt3 (ENSOJAG00000023610) H2AZ1 (ENSOJAG00000023617) ENSOJAG00000023625 ENSOJAG00000023631 rwdd (ENSOJAG00000023638) ing2 (ENSOJAG00000023641) ENSOJAG00000023645 ENSOJAG00000023648 SLX1 (ENSOJAG00000023649) zgc:112271 (ENSOJAG00000023652) ets2 (ENSOJAG00000023653) ENSOJAG00000023659 taf6l (ENSOJAG00000023666) cth1 (ENSOJAG00000023670) mta2 (ENSOJAG00000023748) Ovalentaria_B ANCESTRAL SPECIES 19 ENSGT00940000159769.a.a ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Pomacentridae ANCESTRAL SPECIES 74 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Pomacentridae_A ANCESTRAL SPECIES 53 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00390000016193 ENSGT01030000234590.B.a.a.e.b Amphiprion ANCESTRAL SPECIES 74 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000006988.bb.a ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00390000016193 Orange clownfish MODERN SPECIES 15 senp3b (ENSAPEG00000009637) eif4a1a (ENSAPEG00000009660) ENSAPEG00000009718 mpdu1b (ENSAPEG00000009738) ENSAPEG00000009749 ENSAPEG00000009770 ENSAPEG00000009794 cldnd1a (ENSAPEG00000009810) ACY3 (ENSAPEG00000009828) osbp (ENSAPEG00000009887) coro1b (ENSAPEG00000009952) dtx4a (ENSAPEG00000010017) msantd1 (ENSAPEG00000010060) ENSAPEG00000010099 ENSAPEG00000010196 hacd4 (ENSAPEG00000010214) ##22 ENSAPEG00000010231 ENSAPEG00000010351 ENSAPEG00000010364 ENSAPEG00000010373 mllt3 (ENSAPEG00000010400) ENSAPEG00000010419 ENSAPEG00000010431 ENSAPEG00000010455 ENSAPEG00000010486 ENSAPEG00000010509 ENSAPEG00000010523 oard1 (ENSAPEG00000010553) rwdd (ENSAPEG00000010576) ENSAPEG00000010615 ing2 (ENSAPEG00000010625) Bicolor damselfish MODERN SPECIES 1759 hacd4 (ENSSPAG00000011588) ##22 ENSSPAG00000011517 mllt3 (ENSSPAG00000011443) ENSSPAG00000011421 H2AZ1 (ENSSPAG00000011396) Cichlidae ANCESTRAL SPECIES 31 ENSGT00940000155475.h ENSGT00940000153395.a ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000156309.B.h ENSGT00940000153783.b.a.b ENSGT00940000165992.a.a ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT01040000240444.A.a.b ENSGT00950000182923.B.b ENSGT00990000211448 ENSGT00390000014725.r.a ENSGT00940000156850.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 18 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000156309.B.h ENSGT00940000153783.b.a.b ENSGT00940000165992.a.a ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT01040000240444.A.a.b ENSGT00950000182923.B.b.h ENSGT00390000014725.r.a.e.a ENSGT00940000156850.a.a ENSGT00940000177336 Pseudocrenilabrinae_A ANCESTRAL SPECIES 47 ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000156309.B.h ENSGT00940000153783.b.a.b ENSGT00940000165992.a.a ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT01040000240444.A.a.b ENSGT00950000182923.B.b.h ENSGT00390000014725.r.a.e.a ENSGT00940000156850.a.a ENSGT00940000177336 ENSGT00940000160621 Haplochromini ANCESTRAL SPECIES 66 ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00940000155903.v ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000156309.B.h ENSGT00940000153783.b.a.b ENSGT00940000165992.a.a ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT01040000240444.A.a.b ENSGT00950000182923.B.b.h ENSGT00390000014725.r.a.e.a ENSGT00940000156850.a.a ENSGT00940000177336 ENSGT00940000160621 ENSGT00970000193372.a.b Haplochromini_A ANCESTRAL SPECIES 71 ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000156309.B.h ENSGT00940000153783.b.a.b ENSGT00940000165992.a.a ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT01040000240444.A.a.b ENSGT00950000182923.B.b.h ENSGT00390000014725.r.a.e.a ENSGT00940000156850.a.a ENSGT00940000177336 ENSGT00940000160621 ENSGT00970000193372.a.b Haplochromini_B ANCESTRAL SPECIES 85 ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438.e ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000156309.B.h ENSGT00940000153783.b.a.b ENSGT00940000165992.a.a ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT01040000240444.A.a.b ENSGT00950000182923.B.b.h ENSGT00390000014725.r.a.e.a ENSGT00940000156850.a.a ENSGT00940000177336 ENSGT00940000160621 ENSGT00970000193372.a.b Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 1106 ENSMZEG00005012874 NAT16 (ENSMZEG00005012858) mtm1 (ENSMZEG00005012820) mtmr1a (ENSMZEG00005012793) ENSMZEG00005012778 ENSMZEG00005012758 ACO1 (ENSMZEG00005012733) PAQR9 (ENSMZEG00005012721) ENSMZEG00005012701 frem1a (ENSMZEG00005012670) tspan5a (ENSMZEG00005012642) RAP1GDS1 (ENSMZEG00005012594) slc1a1 (ENSMZEG00005012557) trmt10a (ENSMZEG00005012538) C4orf54 (ENSMZEG00005012530) hacd4 (ENSMZEG00005012515) ##22 ENSMZEG00005009948 H2AZ1 (ENSMZEG00005009798) ENSMZEG00005009782 senp3b (ENSMZEG00005009750) eif4a1a (ENSMZEG00005009716) sox19b (ENSMZEG00005009705) mpdu1b (ENSMZEG00005009691) MBLAC1 (ENSMZEG00005009681) ENSMZEG00005009669 gal3st4 (ENSMZEG00005009657) trappc14 (ENSMZEG00005009645) ENSMZEG00005009591 ENSMZEG00005009570 ENSMZEG00005009555 serpine1 (ENSMZEG00005009541) Zebra mbuna MODERN SPECIES 454 hacd4 (ENSMZEG00005022009) ##22 FOCAD (ENSMZEG00005021997) ENSMZEG00005021995 Eastern happy MODERN SPECIES 15 sf1 (ENSACLG00000007633) rbm4.1 (ENSACLG00000007722) rbm4.2 (ENSACLG00000007740) ENSACLG00000007744 ENSACLG00000007745 ENSACLG00000007749 ACO1 (ENSACLG00000007755) PAQR9 (ENSACLG00000007773) ENSACLG00000007781 frem1a (ENSACLG00000007808) tspan5a (ENSACLG00000007837) RAP1GDS1 (ENSACLG00000007853) slc1a1 (ENSACLG00000007903) trmt10a (ENSACLG00000007945) C4orf54 (ENSACLG00000007946) hacd4 (ENSACLG00000007952) ##22 ENSACLG00000007967 ENSACLG00000008007 ENSACLG00000008013 ENSACLG00000008017 ENSACLG00000008023 ENSACLG00000008027 ENSACLG00000008031 ENSACLG00000008034 ENSACLG00000008038 ENSACLG00000008040 ENSACLG00000008044 ENSACLG00000008048 ENSACLG00000008050 ENSACLG00000008057 ENSACLG00000008069 P. nyererei MODERN SPECIES 800 ACO1 (ENSPNYG00000009425) PAQR9 (ENSPNYG00000009359) ENSPNYG00000009341 frem1a (ENSPNYG00000009262) tspan5a (ENSPNYG00000009237) RAP1GDS1 (ENSPNYG00000009192) slc1a1 (ENSPNYG00000009145) trmt10a (ENSPNYG00000009101) ENSPNYG00000009093 hacd4 (ENSPNYG00000009080) ##22 ENSPNYG00000009032 Midas cichlid MODERN SPECIES 351 slc1a1 (ENSACIG00000016751) ENSACIG00000016737 trmt10a (ENSACIG00000016686) C4orf54 (ENSACIG00000016676) hacd4 (ENSACIG00000016651) ##22 ENSACIG00000016563 ENSACIG00000016544 ENSACIG00000016539 ENSACIG00000016515 H2AZ1 (ENSACIG00000016496) Tiger tail seahorse MODERN SPECIES 506 ENSHCOG00000012035 agfg2 (ENSHCOG00000012027) acap1 (ENSHCOG00000012023) SLC16A13 (ENSHCOG00000012018) BCL6B (ENSHCOG00000012012) ENSHCOG00000011983 ENSHCOG00000011977 ENSHCOG00000011968 ENSHCOG00000011945 NEURL4 (ENSHCOG00000011926) shbg (ENSHCOG00000011914) ENSHCOG00000011903 POLR2A (ENSHCOG00000011874) capgb (ENSHCOG00000011861) ENSHCOG00000011850 hacd4 (ENSHCOG00000011839) ##22 ENSHCOG00000011818 mllt3 (ENSHCOG00000011714) H2AZ1 (ENSHCOG00000011658) ENSHCOG00000011638 ENSHCOG00000011621 ENSHCOG00000011569 rwdd (ENSHCOG00000011547) ing2 (ENSHCOG00000011528) ENSHCOG00000011518 men1 (ENSHCOG00000011488) map4k2 (ENSHCOG00000011469) ENSHCOG00000011413 rbm4.1 (ENSHCOG00000011403) sf1 (ENSHCOG00000011388) ENSHCOG00000011377 Pinecone sodierfish MODERN SPECIES 9 ENSMMDG00005007997 ufsp1 (ENSMMDG00005008000) ENSMMDG00005008003 epoa (ENSMMDG00005008007) pop7 (ENSMMDG00005008010) URGCP (ENSMMDG00005008014) ENSMMDG00005008015 ENSMMDG00005008019 tspan5a (ENSMMDG00005008023) RAP1GDS1 (ENSMMDG00005008038) slc1a1 (ENSMMDG00005008604) ENSMMDG00005008605 ENSMMDG00005008607 trmt10a (ENSMMDG00005008608) C4orf54 (ENSMMDG00005008610) hacd4 (ENSMMDG00005008613) ##22 ENSMMDG00005008623 mllt3 (ENSMMDG00005008643) H2AZ1 (ENSMMDG00005008655) ENSMMDG00005008692 ENSMMDG00005008697 ENSMMDG00005008709 ENSMMDG00005008824 rwdd (ENSMMDG00005008826) ENSMMDG00005008830 ing2 (ENSMMDG00005008832) ENSMMDG00005008834 si:ch211-212k18.8 (ENSMMDG00005008837) slx1b (ENSMMDG00005008841) zgc:112271 (ENSMMDG00005008842) ENSMMDG00005008845 Cod MODERN SPECIES 8 ENSGMOG00000030156 ENSGMOG00000000915 ENSGMOG00000005480 ENSGMOG00000032873 ENSGMOG00000026866 ENSGMOG00000000968 frem1a (ENSGMOG00000000910) ENSGMOG00000025124 tspan5a (ENSGMOG00000006958) ENSGMOG00000000882 slc1a1 (ENSGMOG00000000866) ENSGMOG00000024515 ENSGMOG00000027054 ENSGMOG00000000852 ENSGMOG00000026945 hacd4 (ENSGMOG00000000843) ##22 ENSGMOG00000000776 mllt3 (ENSGMOG00000022778) ENSGMOG00000022750 ENSGMOG00000009869 ENSGMOG00000014906 acox3 (ENSGMOG00000017847) senp3b (ENSGMOG00000018338) ENSGMOG00000018350 sox19b (ENSGMOG00000034003) mpdu1b (ENSGMOG00000018375) ENSGMOG00000018392 tm4sf21b (ENSGMOG00000018395) gal3st4 (ENSGMOG00000026795) gal3st4 (ENSGMOG00000035918) trappc14 (ENSGMOG00000007816) Protacanthopterygii ANCESTRAL SPECIES 20 ENSGT00950000183137.b.a ENSGT00940000155800.a.b.c ENSGT00390000015958.d ENSGT00940000153289.a.a.b ENSGT00940000157772 ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00940000165285.f ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00940000156306 ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b ENSGT00940000158006 ENSGT00550000074944 ENSGT00940000158215 ENSGT00390000008250 ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b ENSGT00940000154308.A.b.a.a.b ENSGT00950000182920.b.a.b.a.a ENSGT00390000007252.c Salmoninae ANCESTRAL SPECIES 269 ENSGT00950000183137.b.a.j ENSGT00940000155800.a.b.c ENSGT00390000015958.d ENSGT00940000163471.a.f ENSGT00940000153289.a.a.b.d ENSGT00940000157772.d ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a.a ENSGT00940000161376 ENSGT00390000014293.a.d ENSGT00940000180421 ENSGT00940000155397.a.b.g ENSGT00530000063169.a.q ENSGT00730000111645.a.c ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.g.a ENSGT00900000140979.a.a ENSGT00530000063652.a.a.a ENSGT00940000156306.c ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b.v ENSGT00940000158006.b ENSGT00550000074944.l ENSGT00940000158215.o ENSGT00390000008250.g ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b ENSGT00940000154308.A.b.a.a.b ENSGT00950000182920.b.a.b.a.a.g ENSGT00390000007252.c.e Salmoninae_a ANCESTRAL SPECIES 34 ENSGT00940000160460 ENSGT00950000183137.b.a.j ENSGT00940000155800.a.b.c ENSGT00390000015958.d ENSGT00940000163471.a.f ENSGT00940000153289.a.a.b.d ENSGT00940000157772.d ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a.a ENSGT00390000014293.a.d ENSGT00940000155397.a.b.g ENSGT00990000214324 ENSGT00530000063169.a.q ENSGT00730000111645.a.c ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.g.a ENSGT00530000063652.a.a.a ENSGT00940000156306.c ENSGT00390000008787.a ENSGT00950000182866.D.d.a.c.a.i.b.a.b ENSGT00950000182916.a.b.a.b.u.b ENSGT00940000158006.b ENSGT00550000074944.l ENSGT00940000158215.o ENSGT00390000008250.g ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b ENSGT00940000154308.A.b.a.a.b ENSGT00950000182920.b.a.b.a.a.g ENSGT00390000007252.c.e Salmo ANCESTRAL SPECIES 18 ENSGT00940000155800.a.b.c ENSGT00390000015958.d ENSGT00940000154308.D.c.a.b.a.b.a.b.a.a.a.b ENSGT00940000154308.D.c.a.b.a.a.a.a.a.b.a.a.a.a.a.a.b.b ENSGT00940000154308.D.c.a.b.b.a.a.a.b.a.b ENSGT00940000153289.a.a.b.d ENSGT00940000157772.d ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a.a ENSGT00390000014293.a.d ENSGT00940000155397.a.b.g ENSGT00990000214324 ENSGT00530000063169.a.q ENSGT00730000111645.a.c ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.g.a ENSGT00530000063652.a.a.a ENSGT00940000156306.c ENSGT00390000008787.a ENSGT00950000182866.D.d.a.c.a.i.b.a.b ENSGT00950000182916.a.b.a.b.u.b ENSGT00940000158006.b ENSGT00550000074944.l ENSGT00940000158215.o ENSGT00390000008250.g ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b ENSGT00940000154308.A.b.a.a.b ENSGT00950000182920.b.a.b.a.a.g ENSGT00390000007252.c.e River trout MODERN SPECIES 35 ccdc149a (ENSSTUG00000001799) ENSSTUG00000001763 ENSSTUG00000001748 ENSSTUG00000001729 ENSSTUG00000001697 ENSSTUG00000001695 ACO1 (ENSSTUG00000001546) frem1a (ENSSTUG00000001292) ENSSTUG00000001247 tspan5a (ENSSTUG00000001228) RAP1GDS1 (ENSSTUG00000001109) slc1a1 (ENSSTUG00000000964) ENSSTUG00000000935 trmt10a (ENSSTUG00000000926) C4orf54 (ENSSTUG00000000922) hacd4 (ENSSTUG00000000918) ##22 ENSSTUG00000000738 mllt3 (ENSSTUG00000000674) H2AZ1 (ENSSTUG00000000660) DDIT4L (ENSSTUG00000000652) PPP3CA (ENSSTUG00000000534) BANK1 (ENSSTUG00000000506) nxpe3 (ENSSTUG00000000503) NFIB (ENSSTUG00000048474) zdhhc21 (ENSSTUG00000048446) plaa (ENSSTUG00000048239) ENSSTUG00000048220 DENND4C (ENSSTUG00000048007) haus6 (ENSSTUG00000047949) ENSSTUG00000047944 ENSSTUG00000047936 Atlantic salmon MODERN SPECIES 9 ENSSSAG00000107458 ENSSSAG00000112040 ENSSSAG00000097914 ENSSSAG00000066501 ENSSSAG00000110548 ENSSSAG00000065501 frem1 (ENSSSAG00000065397) ENSSSAG00000116401 ENSSSAG00000065377 tspan5a (ENSSSAG00000065056) ENSSSAG00000064079 slc1a1 (ENSSSAG00000063951) ENSSSAG00000063943 ENSSSAG00000082168 ENSSSAG00000082763 hacd4 (ENSSSAG00000063895) ##22 focad (ENSSSAG00000057702) mllt3 (ENSSSAG00000057529) H2AZ1 (ENSSSAG00000057486) ddit4l (ENSSSAG00000057471) PPP3CA (ENSSSAG00000056867) ENSSSAG00000056830 ENSSSAG00000095391 ENSSSAG00000084865 ENSSSAG00000054032 ENSSSAG00000096600 ENSSSAG00000053975 ENSSSAG00000053876 ENSSSAG00000053848 ENSSSAG00000041291 ENSSSAG00000040980 Oncorhynchus ANCESTRAL SPECIES 31 ENSGT00950000183137.b.a.j.a ENSGT00940000155800.a.b.c ENSGT00390000015958.d ENSGT01100000263495.A.a.b.b.a.a.b.b.b.b.b.b.a.b.a.a.a.b.b.a.b ENSGT00940000154308.D.c.a.b.b.a.a.a.b.a.b ENSGT00940000153289.a.a.b.d ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a.a ENSGT00940000161376 ENSGT00390000014293.a.d ENSGT00940000155397.a.b.g ENSGT00990000214324 ENSGT00530000063169.a.q ENSGT00730000111645.a.c ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.g.a ENSGT00530000063652.a.a.a ENSGT00940000156306.c ENSGT00390000008787.a ENSGT00950000182866.D.d.a.c.a.i.b.a.b ENSGT00950000182916.a.b.a.b.u.b ENSGT00940000158006.b ENSGT00550000074944.l ENSGT00940000158215.o ENSGT00390000008250.g ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b ENSGT00940000154308.A.b.a.a.b ENSGT00950000182920.b.a.b.a.a.g ENSGT00390000007252.c.e Oncorhynchus_a ANCESTRAL SPECIES 30 ENSGT00950000183137.b.a.j.a ENSGT00940000155800.a.b.c ENSGT00390000015958.d ENSGT01100000263495.A.a.b.b.a.a.b.b.b.b.b.b.a.b.a.a.a.b.b.a.b ENSGT00940000154308.D.c.a.b.b.a.a.a.b.a.b ENSGT00940000153289.a.a.b.d ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a.a ENSGT00940000161376 ENSGT00390000014293.a.d ENSGT00940000155397.a.b.g ENSGT00990000214324 ENSGT00530000063169.a.q ENSGT00730000111645.a.c ENSGT00530000062962.b.b ##22 ENSGT00940000155903.g.a ENSGT00900000140979.a.a.n.b ENSGT00530000063652.a.a.a ENSGT00940000156306.c ENSGT00390000008787.a ENSGT00950000182866.D.d.a.c.a.i.b.a.b ENSGT00950000182916.a.b.a.b.u.b ENSGT00940000158006.b ENSGT00550000074944.l ENSGT00940000158215.o ENSGT00390000008250.g ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b ENSGT00940000154308.A.b.a.a.b ENSGT00950000182920.b.a.b.a.a.g ENSGT00390000007252.c.e Coho salmon MODERN SPECIES 7 PPARGC1A (ENSOKIG00005023592) dhx15 (ENSOKIG00005023620) ccdc149a (ENSOKIG00005023735) ENSOKIG00005023779 ENSOKIG00005023813 ENSOKIG00005023822 ENSOKIG00005023830 frem1a (ENSOKIG00005023905) ENSOKIG00005024300 ENSOKIG00005024316 RAP1GDS1 (ENSOKIG00005024358) slc1a1 (ENSOKIG00005024458) ENSOKIG00005024977 trmt10a (ENSOKIG00005024987) C4orf54 (ENSOKIG00005025004) hacd4 (ENSOKIG00005025014) ##22 mllt3 (ENSOKIG00005025061) H2AZ1 (ENSOKIG00005025091) DDIT4L (ENSOKIG00005025212) PPP3CA (ENSOKIG00005025273) BANK1 (ENSOKIG00005025483) NXPE3 (ENSOKIG00005025501) NFIB (ENSOKIG00005025535) ZDHHC21 (ENSOKIG00005025640) PLAA (ENSOKIG00005025707) ENSOKIG00005026700 haus6 (ENSOKIG00005027182) ENSOKIG00005027220 ENSOKIG00005027238 plin2 (ENSOKIG00005027244) ENSOKIG00005027261 Chinook salmon MODERN SPECIES 1 ENSOTSG00005047222 ENSOTSG00005047223 ENSOTSG00005047224 ENSOTSG00005047226 ENSOTSG00005047227 ENSOTSG00005047228 ENSOTSG00005047229 frem1a (ENSOTSG00005047230) ENSOTSG00005047231 tspan5a (ENSOTSG00005047233) RAP1GDS1 (ENSOTSG00005047234) slc1a1 (ENSOTSG00005047237) ENSOTSG00005047253 trmt10a (ENSOTSG00005047255) C4orf54 (ENSOTSG00005047256) hacd4 (ENSOTSG00005047257) ##22 mllt3 (ENSOTSG00005047259) H2AZ1 (ENSOTSG00005000689) DDIT4L (ENSOTSG00005000760) PPP3CA (ENSOTSG00005001494) BANK1 (ENSOTSG00005001506) nxpe3 (ENSOTSG00005001510) ENSOTSG00005001512 zdhhc21 (ENSOTSG00005001513) plaa (ENSOTSG00005001522) DENND4C (ENSOTSG00005001557) haus6 (ENSOTSG00005001767) ENSOTSG00005001793 ENSOTSG00005001798 plin2 (ENSOTSG00005001802) ENSOTSG00005001807 Rainbow trout MODERN SPECIES 30 PPARGC1A (ENSOMYG00000074575) dhx15 (ENSOMYG00000045446) ccdc149a (ENSOMYG00000045481) ENSOMYG00000058832 ENSOMYG00000001522 ENSOMYG00000001575 frem1a (ENSOMYG00000001711) ENSOMYG00000001846 tspan5a (ENSOMYG00000001867) ENSOMYG00000001988 slc1a1 (ENSOMYG00000002082) ENSOMYG00000002116 ENSOMYG00000002125 ENSOMYG00000002143 ENSOMYG00000065315 hacd4 (ENSOMYG00000002160) ##22 ENSOMYG00000002377 mllt3 (ENSOMYG00000002515) H2AZ1 (ENSOMYG00000002472) DDIT4L (ENSOMYG00000002531) ENSOMYG00000054779 PPP3CA (ENSOMYG00000002701) ENSOMYG00000074496 BANK1 (ENSOMYG00000002844) ENSOMYG00000002928 ENSOMYG00000003066 ENSOMYG00000068849 ENSOMYG00000003148 ENSOMYG00000003535 ENSOMYG00000004585 ENSOMYG00000004846 Huchen MODERN SPECIES 1114 ENSHHUG00000005331 slc1a1 (ENSHHUG00000005296) trmt10a (ENSHHUG00000005292) ENSHHUG00000005244 C4orf54 (ENSHHUG00000005233) hacd4 (ENSHHUG00000005228) ##22 ENSHHUG00000005168 eno4 (ENSHHUG00000005157) hspa12a (ENSHHUG00000005109) pitx3 (ENSHHUG00000005081) ENSHHUG00000005077 Northern pike MODERN SPECIES 23 ccdc149a (ENSELUG00000016931) ACER2 (ENSELUG00000016895) ENSELUG00000016841 ACO1 (ENSELUG00000016812) frem1a (ENSELUG00000016724) ENSELUG00000016572 tspan5a (ENSELUG00000016547) RAP1GDS1 (ENSELUG00000016426) slc1a1 (ENSELUG00000016268) spata6l (ENSELUG00000016212) trmt10a (ENSELUG00000016190) ENSELUG00000031565 ENSELUG00000016183 ENSELUG00000016170 C4orf54 (ENSELUG00000016148) HACD4 (ENSELUG00000016126) ##22 ENSELUG00000016097 mllt3 (ENSELUG00000016011) H2AZ1 (ENSELUG00000015934) DDIT4L (ENSELUG00000015919) PPP3CA (ENSELUG00000015889) BANK1 (ENSELUG00000015766) NFIB (ENSELUG00000015696) zdhhc21 (ENSELUG00000015599) plaa (ENSELUG00000015555) DENND4C (ENSELUG00000015503) haus6 (ENSELUG00000001574) ENSELUG00000015450 ENSELUG00000015361 plin2 (ENSELUG00000015381) ENSELUG00000015347 Osteoglossiformes ANCESTRAL SPECIES 103 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a ##24 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00910000147694 ENSGT00940000156306 ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b ENSGT00940000158006 ENSGT00550000074944 ENSGT00940000158695.a ENSGT00890000139482 ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT00950000183132.C Asian bonytongue MODERN SPECIES 20 SRP72 (ENSSFOG00015002026) arl9 (ENSSFOG00015002018) hopx (ENSSFOG00015026584) SEC24B (ENSSFOG00015001978) TSTD2 (ENSSFOG00015001969) NCBP1 (ENSSFOG00015001872) SLC49A3 (ENSSFOG00015001823) PCGF3 (ENSSFOG00015001785) CPLX1 (ENSSFOG00015026886) ENSSFOG00015025236 ENSSFOG00015024766 gne (ENSSFOG00015001694) clta (ENSSFOG00015031319) rpl34 (ENSSFOG00015001627) SLC24A2 (ENSSFOG00015001558) ##24 hacd4 (ENSSFOG00015030533) ##22 ENSSFOG00015001514 mllt3 (ENSSFOG00015001413) DDIT4L (ENSSFOG00015001392) PPP3CA (ENSSFOG00015001288) BANK1 (ENSSFOG00015001267) NFIB (ENSSFOG00015001197) zdhhc21 (ENSSFOG00015001172) plaa (ENSSFOG00015001104) TMOD1 (ENSSFOG00015001049) tdrd7a (ENSSFOG00015001037) COX18 (ENSSFOG00015001028) igfbp7 (ENSSFOG00015029555) polr2b (ENSSFOG00015000924) noa1 (ENSSFOG00015000914) rest (ENSSFOG00015000910) P. kingsleyae MODERN SPECIES 182 ostc (ENSPKIG00000000697) rpl34 (ENSPKIG00000000673) slc24a2 (ENSPKIG00000000585) ##24 hacd4 (ENSPKIG00000000528) ##22 ENSPKIG00000000409 mllt3 (ENSPKIG00000000298) H2AZ1 (ENSPKIG00000000273) DDIT4L (ENSPKIG00000000268) ENSPKIG00000000260 PPP3CA (ENSPKIG00000000217) BANK1 (ENSPKIG00000000178) NFIB (ENSPKIG00000000142) ENSPKIG00000000118 plaa (ENSPKIG00000000092) TMOD1 (ENSPKIG00000000069) tdrd7a (ENSPKIG00000000052) COX18 (ENSPKIG00000000041) igfbp7 (ENSPKIG00000000031) polr2b (ENSPKIG00000000008) Spotted gar MODERN SPECIES 670 ACO1 (ENSLOCG00000011082) ENSLOCG00000011091 ENSLOCG00000018042 ACER2 (ENSLOCG00000011100) RPS6 (ENSLOCG00000011108) DENND4C (ENSLOCG00000011126) gne (ENSLOCG00000011146) clta (ENSLOCG00000011155) nansa (ENSLOCG00000011173) ENSLOCG00000011181 ENSLOCG00000011189 COL25A1 (ENSLOCG00000011197) etnppl (ENSLOCG00000011208) ostc (ENSLOCG00000011223) rpl34 (ENSLOCG00000011235) hacd4 (ENSLOCG00000011238) ##22 FOCAD (ENSLOCG00000011240) mllt3 (ENSLOCG00000011259) H2AZ1 (ENSLOCG00000011277) DDIT4L (ENSLOCG00000011286) ENSLOCG00000018044 ENSLOCG00000018046 ENSLOCG00000018048 ENSLOCG00000011293 PPP3CA (ENSLOCG00000011303) BANK1 (ENSLOCG00000011321) NFIB (ENSLOCG00000011325) zdhhc21 (ENSLOCG00000011340) plaa (ENSLOCG00000011346) TMOD1 (ENSLOCG00000011358) tdrd7a (ENSLOCG00000011373) Reedfish MODERN SPECIES 15 aqp3a (ENSECRG00000011163) ENSECRG00000011167 ENSECRG00000011172 ube2r2 (ENSECRG00000011181) ENSECRG00000011188 ENSECRG00000011194 ela3l (ENSECRG00000011198) ENSECRG00000011202 mtap (ENSECRG00000011205) TOPORS (ENSECRG00000011212) DMRTA1 (ENSECRG00000011218) ENSECRG00000011232 elavl2 (ENSECRG00000011249) ENSECRG00000011263 CAAP1 (ENSECRG00000011292) hacd4 (ENSECRG00000011333) ##22 FOCAD (ENSECRG00000011383) ENSECRG00000011495 ENSECRG00000011506 H2AZ1 (ENSECRG00000011528) DDIT4L (ENSECRG00000011559) SLC39A8 (ENSECRG00000011574) ENSECRG00000011595 PPP3CA (ENSECRG00000011638) ENSECRG00000011663 rpl34 (ENSECRG00000011673) CXXC4 (ENSECRG00000011685) TET2 (ENSECRG00000011705) ppa2 (ENSECRG00000011746) ARHGEF38 (ENSECRG00000011809) ints12 (ENSECRG00000011834) Sarcopterygii ANCESTRAL SPECIES 461 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 Tetrapoda ANCESTRAL SPECIES 2 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 Amniota ANCESTRAL SPECIES 4 ENSGT00940000156665 ENSGT00390000005644 ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Sauria ANCESTRAL SPECIES 5 ENSGT00390000005644 ENSGT01000000214430.d ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.c ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 Archelosauria ANCESTRAL SPECIES 7 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 Archosauria ANCESTRAL SPECIES 31 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT01030000235336 Aves ANCESTRAL SPECIES 45 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT01030000235336 Neognathae ANCESTRAL SPECIES 12 ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT01030000235336 Neognathae_b ANCESTRAL SPECIES 5 ENSGT00940000156165.k.b ENSGT01050000244942.b.a.a ENSGT00940000154609 ENSGT00940000155221 ENSGT00940000157708 ENSGT00940000158164 ENSGT00390000005323 ENSGT00940000159384 ENSGT00920000149159 ENSGT00940000155770 ENSGT00390000015537.lb.b ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 Neognathae_c ANCESTRAL SPECIES 2 ENSGT00940000156165.k.b ENSGT01050000244942.b.a.a ENSGT00940000154609 ENSGT00940000155221 ENSGT00940000157708 ENSGT00940000158164 ENSGT00390000005323 ENSGT00940000159384 ENSGT00920000149159 ENSGT00940000155770 ENSGT00390000015537.lb.b ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 Kakapo MODERN SPECIES 19 ENSSHBG00005014388 TMC1 (ENSSHBG00005014403) ALDH1A1 (ENSSHBG00005014415) ANXA1 (ENSSHBG00005014425) RORB (ENSSHBG00005014434) TRPM6 (ENSSHBG00005014447) CARNMT1 (ENSSHBG00005014513) NMRK1 (ENSSHBG00005014528) OSTF1 (ENSSHBG00005014548) PCSK5 (ENSSHBG00005014585) ENSSHBG00005014628 PIP5K1B (ENSSHBG00005014641) FXN (ENSSHBG00005014655) TJP2 (ENSSHBG00005015315) ENSSHBG00005020025 HACD4 (ENSSHBG00005020026) ##22 FOCAD (ENSSHBG00005020031) MLLT3 (ENSSHBG00005020033) SLC24A2 (ENSSHBG00005020035) ##24 ACER2 (ENSSHBG00005020040) ENSSHBG00005020043 DENND4C (ENSSHBG00005020049) PLIN2 (ENSSHBG00005020060) HAUS6 (ENSSHBG00005020065) SAXO1 (ENSSHBG00005020075) ENSSHBG00005020078 ENSSHBG00005020084 SH3GL2 (ENSSHBG00005020088) ENSSHBG00005020091 CNTLN (ENSSHBG00005020093) BNC2 (ENSSHBG00005020107) Golden eagle MODERN SPECIES 91 ENSACCG00020016012 ALDH1A1 (ENSACCG00020016020) ENSACCG00020009610 ANXA1 (ENSACCG00020009628) RORB (ENSACCG00020009650) TRPM6 (ENSACCG00020010722) CARNMT1 (ENSACCG00020011293) NMRK1 (ENSACCG00020011311) OSTF1 (ENSACCG00020011328) PCSK5 (ENSACCG00020011352) ENSACCG00020011377 PIP5K1B (ENSACCG00020011401) FXN (ENSACCG00020011414) TJP2 (ENSACCG00020011448) ENSACCG00020011514 HACD4 (ENSACCG00020011540) ##22 FOCAD (ENSACCG00020011610) MLLT3 (ENSACCG00020011695) SLC24A2 (ENSACCG00020011737) ##24 ACER2 (ENSACCG00020011789) ENSACCG00020011813 ENSACCG00020011845 DENND4C (ENSACCG00020011926) PLIN2 (ENSACCG00020012024) HAUS6 (ENSACCG00020012087) SAXO1 (ENSACCG00020012163) ADAMTSL1 (ENSACCG00020012441) ENSACCG00020012754 ENSACCG00020012769 SH3GL2 (ENSACCG00020012786) CNTLN (ENSACCG00020012818) Passeriformes ANCESTRAL SPECIES 7 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT01030000234519.e.a.a.a.a.b ENSGT00940000153241.A ENSGT00390000013287 ENSGT00940000162569.b ENSGT00950000183083.a.d.b ENSGT00940000161970 ENSGT00940000154422 ENSGT00940000161348 ENSGT00390000015537.lb.a ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 ENSGT00390000005708 Great tit MODERN SPECIES 642 TLE4 (ENSPMJG00000018643) PSAT1 (ENSPMJG00000018641) CEP78 (ENSPMJG00000018639) ENSPMJG00000018637 VPS13A (ENSPMJG00000017722) FOXB2 (ENSPMJG00000017720) ENSPMJG00000017719 ENSPMJG00000017716 GCNT1 (ENSPMJG00000017715) RFK (ENSPMJG00000017714) ENSPMJG00000017713 PIP5K1B (ENSPMJG00000017712) FXN (ENSPMJG00000017711) TJP2 (ENSPMJG00000017709) ENSPMJG00000017708 HACD4 (ENSPMJG00000017707) ##22 FOCAD (ENSPMJG00000017706) MLLT3 (ENSPMJG00000017704) SLC24A2 (ENSPMJG00000017702) ##24 ACER2 (ENSPMJG00000017701) ENSPMJG00000017700 DENND4C (ENSPMJG00000017699) PLIN2 (ENSPMJG00000017698) HAUS6 (ENSPMJG00000017696) ENSPMJG00000017695 ADAMTSL1 (ENSPMJG00000017694) SH3GL2 (ENSPMJG00000017693) ENSPMJG00000017688 BNC2 (ENSPMJG00000017687) CCDC171 (ENSPMJG00000017668) PSIP1 (ENSPMJG00000017666) Passeriformes_d ANCESTRAL SPECIES 6 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT01030000234519.e.a.a.a.a.b ENSGT00940000153241.A ENSGT00390000013287 ENSGT00940000162569.b.e.a ENSGT00950000183083.a.d.b ENSGT00940000161970 ENSGT00940000154422 ENSGT00940000161348 ENSGT00390000015537.lb.a ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 ENSGT00390000005708 Passeriformes_g ANCESTRAL SPECIES 7 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT01030000234519.e.a.a.a.a.b ENSGT00940000153241.A ENSGT00390000013287 ENSGT00940000162569.b.e.a ENSGT00950000183083.a.d.b ENSGT00940000161970 ENSGT00940000154422 ENSGT00940000161348 ENSGT00390000015537.lb.a ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 ENSGT00390000005708 Passeroidea ANCESTRAL SPECIES 23 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT01030000234519.e.a.a.a.a.b ENSGT00940000153241.A ENSGT00390000013287 ENSGT00940000162569.b.e.a ENSGT00950000183083.a.d.b ENSGT00940000161970 ENSGT00940000154422 ENSGT00940000161348 ENSGT00390000015537.lb.a ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 ENSGT00390000005708 Common canary MODERN SPECIES 25 VPS13A (ENSSCAG00000001181) ENSSCAG00000001220 ENSSCAG00000001254 GCNT1 (ENSSCAG00000001263) RFK (ENSSCAG00000001272) ENSSCAG00000001290 PIP5K1B (ENSSCAG00000001324) FXN (ENSSCAG00000001335) TJP2 (ENSSCAG00000001351) ENSSCAG00000001371 HACD4 (ENSSCAG00000001375) ##22 FOCAD (ENSSCAG00000001393) MLLT3 (ENSSCAG00000001419) SLC24A2 (ENSSCAG00000001432) ##24 ACER2 (ENSSCAG00000001442) ENSSCAG00000001449 DENND4C (ENSSCAG00000001467) PLIN2 (ENSSCAG00000001499) HAUS6 (ENSSCAG00000001512) ADAMTSL1 (ENSSCAG00000001544) SH3GL2 (ENSSCAG00000001580) BNC2 (ENSSCAG00000001590) CCDC171 (ENSSCAG00000001614) PSIP1 (ENSSCAG00000001649) SNAPC3 (ENSSCAG00000001672) TTC39B (ENSSCAG00000001680) Zebra finch MODERN SPECIES 104 PIP5K1B (ENSTGUG00000004178) FXN (ENSTGUG00000019340) TJP2 (ENSTGUG00000004208) ENSTGUG00000004245 HACD4 (ENSTGUG00000004248) ##22 FOCAD (ENSTGUG00000004262) MLLT3 (ENSTGUG00000004299) SLC24A2 (ENSTGUG00000004321) ##24 ACER2 (ENSTGUG00000019762) ENSTGUG00000004334 DENND4C (ENSTGUG00000004350) PLIN2 (ENSTGUG00000004399) HAUS6 (ENSTGUG00000026672) ADAMTSL1 (ENSTGUG00000004435) SH3GL2 (ENSTGUG00000004460) ENSTGUG00000025732 BNC2 (ENSTGUG00000004482) ENSTGUG00000004492 PSIP1 (ENSTGUG00000004519) SNAPC3 (ENSTGUG00000004548) Medium ground finch MODERN SPECIES 26 TLE4 (ENSGFOG00000007432) PSAT1 (ENSGFOG00000007440) CEP78 (ENSGFOG00000007453) ENSGFOG00000007499 VPS13A (ENSGFOG00000007562) ENSGFOG00000008216 ENSGFOG00000008222 GCNT1 (ENSGFOG00000008229) RFK (ENSGFOG00000008233) ENSGFOG00000008240 PIP5K1B (ENSGFOG00000008263) ENSGFOG00000008273 FXN (ENSGFOG00000008279) TJP2 (ENSGFOG00000008285) ENSGFOG00000008306 HACD4 (ENSGFOG00000008308) ##22 FOCAD (ENSGFOG00000008324) MLLT3 (ENSGFOG00000008367) SLC24A2 (ENSGFOG00000008377) ##24 ACER2 (ENSGFOG00000008388) ENSGFOG00000008393 DENND4C (ENSGFOG00000008426) PLIN2 (ENSGFOG00000008562) HAUS6 (ENSGFOG00000008571) ADAMTSL1 (ENSGFOG00000008592) SH3GL2 (ENSGFOG00000008649) ENSGFOG00000008670 BNC2 (ENSGFOG00000008686) ENSGFOG00000008696 ENSGFOG00000008702 ENSGFOG00000008704 Flycatcher MODERN SPECIES 561 NAA35 (ENSFALG00000003574) AGTPBP1 (ENSFALG00000003605) ENSFALG00000003611 PSAT1 (ENSFALG00000003335) CEP78 (ENSFALG00000003321) ENSFALG00000003294 VPS13A (ENSFALG00000003265) FOXB2 (ENSFALG00000003253) PRUNE2 (ENSFALG00000028604) GCNT1 (ENSFALG00000014568) RFK (ENSFALG00000027122) ENSFALG00000003199 ENSFALG00000003176 ENSFALG00000003147 ENSFALG00000003139 HACD4 (ENSFALG00000025434) ##22 FOCAD (ENSFALG00000003119) MLLT3 (ENSFALG00000003101) SLC24A2 (ENSFALG00000003088) ##24 ACER2 (ENSFALG00000022880) ENSFALG00000003078 DENND4C (ENSFALG00000003075) PLIN2 (ENSFALG00000003066) ADAMTSL1 (ENSFALG00000003055) ENSFALG00000003049 BNC2 (ENSFALG00000003044) KDM4C (ENSFALG00000010643) GLDC (ENSFALG00000010628) UHRF2 (ENSFALG00000010614) KIAA2026 (ENSFALG00000010612) MLANA (ENSFALG00000028522) Galloanserae ANCESTRAL SPECIES 11 ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT00390000007924 Anatidae ANCESTRAL SPECIES 12 ENSGT00390000017130 ENSGT00940000156165.k.b ENSGT01050000244942.b.a.a ENSGT00940000154609 ENSGT00940000155221 ENSGT00940000157708 ENSGT00940000158164 ENSGT00390000005323 ENSGT00920000149159 ENSGT00940000155770 ENSGT00390000015537 ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Duck MODERN SPECIES 4281 ZFAND5 (ENSAPLG00000004423) ENSAPLG00000027579 ALDH1A1 (ENSAPLG00000004796) ANXA1 (ENSAPLG00000007359) RORB (ENSAPLG00000007187) TRPM6 (ENSAPLG00000014165) CARNMT1 (ENSAPLG00000014643) OSTF1 (ENSAPLG00000022909) PCSK5 (ENSAPLG00000014928) ENSAPLG00000016157 ENSAPLG00000029916 PIP5K1B (ENSAPLG00000016263) FXN (ENSAPLG00000025427) TJP2 (ENSAPLG00000002087) ENSAPLG00000003430 HACD4 (ENSAPLG00000003531) ##22 FOCAD (ENSAPLG00000003581) MLLT3 (ENSAPLG00000004429) SLC24A2 (ENSAPLG00000020062) ##24 ACER2 (ENSAPLG00000004885) DENND4C (ENSAPLG00000005223) RPS6 (ENSAPLG00000004889) PLIN2 (ENSAPLG00000005745) HAUS6 (ENSAPLG00000006057) SAXO1 (ENSAPLG00000006403) ENSAPLG00000006493 ENSAPLG00000025052 ENSAPLG00000006616 SH3GL2 (ENSAPLG00000007190) CNTLN (ENSAPLG00000007696) ENSAPLG00000020249 Pink-footed goose MODERN SPECIES 166 RORB (ENSABRG00000016287) TRPM6 (ENSABRG00000016397) CARNMT1 (ENSABRG00000016855) OSTF1 (ENSABRG00000016866) PCSK5 (ENSABRG00000016875) ENSABRG00000016887 PIP5K1B (ENSABRG00000016890) FXN (ENSABRG00000016901) ENSABRG00000016903 ENSABRG00000016912 HACD4 (ENSABRG00000016929) ##22 FOCAD (ENSABRG00000017047) MLLT3 (ENSABRG00000017613) SLC24A2 (ENSABRG00000017632) ##24 ACER2 (ENSABRG00000017637) ENSABRG00000017640 DENND4C (ENSABRG00000017651) Phasianidae ANCESTRAL SPECIES 5 ENSGT00940000153636.b ENSGT00940000157366 ENSGT00940000160905 ENSGT00550000074816.B ENSGT01100000263829 ENSGT00940000156117 ENSGT00390000017892 ENSGT00940000156820.a.a ENSGT00530000063335.B.a.b ENSGT00940000158634 ENSGT00390000005811 ENSGT00940000156639 ENSGT00390000015537.rb.b ENSGT00940000155225.b.b ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT00390000007924 Japanese quail MODERN SPECIES 699 TRPM3 (ENSCJPG00005007756) KLF9 (ENSCJPG00005007737) ENSCJPG00005007735 MAMDC2 (ENSCJPG00005007732) PTAR1 (ENSCJPG00005007729) APBA1 (ENSCJPG00005007725) ENTREP1 (ENSCJPG00005007724) ENSCJPG00005007723 ENSCJPG00005007722 ENSCJPG00005007721 FXN (ENSCJPG00005007720) PIP5K1B (ENSCJPG00005007719) ENSCJPG00005007712 ENSCJPG00005007710 ENSCJPG00005007708 HACD4 (ENSCJPG00005007707) ##22 FOCAD (ENSCJPG00005007688) MLLT3 (ENSCJPG00005007680) SLC24A2 (ENSCJPG00005007673) ##24 ACER2 (ENSCJPG00005007671) ENSCJPG00005007668 DENND4C (ENSCJPG00005007667) PLIN2 (ENSCJPG00005007666) HAUS6 (ENSCJPG00005007664) SAXO1 (ENSCJPG00005007663) ADAMTSL1 (ENSCJPG00005007653) SH3GL2 (ENSCJPG00005007638) CNTLN (ENSCJPG00005007635) BNC2 (ENSCJPG00005007620) ENSCJPG00005007601 ZDHHC21 (ENSCJPG00005007576) Phasianidae_b ANCESTRAL SPECIES 5 ENSGT00940000157611 ENSGT00940000153636.b ENSGT00940000157366 ENSGT00940000160905 ENSGT00550000074816.B ENSGT01100000263829 ENSGT00940000156117 ENSGT00390000017892 ENSGT00940000156820.a.a ENSGT00530000063335.B.a.b ENSGT00940000158634 ENSGT00390000005811 ENSGT00940000156639 ENSGT00940000155225.b.b ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT00390000007924 Chicken MODERN SPECIES 131 TRPM3 (ENSGALG00010016618) KLF9 (ENSGALG00010014987) SMC5 (ENSGALG00010014971) MAMDC2 (ENSGALG00010014934) PTAR1 (ENSGALG00010014914) APBA1 (ENSGALG00010014837) ENTREP1 (ENSGALG00010014810) TJP2 (ENSGALG00010016887) FXN (ENSGALG00010014758) PIP5K1B (ENSGALG00010015797) RFKL (ENSGALG00010015674) ENSGALG00010015650 ENSGALG00010015642 ENSGALG00010015634 ENSGALG00010014231 HACD4 (ENSGALG00010014190) ##22 FOCAD (ENSGALG00010014153) MLLT3 (ENSGALG00010013967) SLC24A2 (ENSGALG00010016336) ##24 ACER2 (ENSGALG00010016314) RPS6 (ENSGALG00010016308) DENND4C (ENSGALG00010016305) PLIN2 (ENSGALG00010016168) HAUS6 (ENSGALG00010016114) ENSGALG00010016080 SAXO1 (ENSGALG00010016073) ADAMTSL1 (ENSGALG00010016043) SH3GL2 (ENSGALG00010014197) CNTLN (ENSGALG00010016566) BNC2 (ENSGALG00010016535) ENSGALG00010014439 Turkey MODERN SPECIES 1299 ABHD17B (ENSMGAG00000005848) ENSMGAG00000017553 ZFAND5 (ENSMGAG00000005890) TRPM3 (ENSMGAG00000005800) ENSMGAG00000022641 SMC5 (ENSMGAG00000005778) APBA1 (ENSMGAG00000005770) PTAR1 (ENSMGAG00000021122) MAMDC2 (ENSMGAG00000005810) ENTREP1 (ENSMGAG00000008761) ENSMGAG00000005756 FXN (ENSMGAG00000018136) ENSMGAG00000005733 ENSMGAG00000019192 ENSMGAG00000013863 HACD4 (ENSMGAG00000019814) ##22 ENSMGAG00000021791 ENSMGAG00000020550 SLC24A2 (ENSMGAG00000005672) ##24 ACER2 (ENSMGAG00000022816) ENSMGAG00000005604 DENND4C (ENSMGAG00000005660) PLIN2 (ENSMGAG00000005633) HAUS6 (ENSMGAG00000020188) SAXO1 (ENSMGAG00000005655) ADAMTSL1 (ENSMGAG00000016070) ENSMGAG00000020884 ENSMGAG00000008992 BNC2 (ENSMGAG00000021479) ENSMGAG00000022161 CCDC171 (ENSMGAG00000020518) African ostrich MODERN SPECIES 687 MTAP (ENSSCUG00000009112) ENSSCUG00000009105 HACD4 (ENSSCUG00000009101) ##22 FOCAD (ENSSCUG00000009089) ENSSCUG00000009077 ENSSCUG00000009070 ##24 ACER2 (ENSSCUG00000009067) ENSSCUG00000009064 DENND4C (ENSSCUG00000009048) PLIN2 (ENSSCUG00000009009) HAUS6 (ENSSCUG00000009005) SAXO1 (ENSSCUG00000009004) ADAMTSL1 (ENSSCUG00000009000) Australian saltwater crocodile MODERN SPECIES 67 LVRN (ENSCPRG00005015523) AP3S1 (ENSCPRG00005015530) ATG12 (ENSCPRG00005015533) CDO1 (ENSCPRG00005015535) TMED7 (ENSCPRG00005015538) ENSCPRG00005015541 FEM1C (ENSCPRG00005015542) CCDC112 (ENSCPRG00005015544) PGGT1B (ENSCPRG00005015545) TRIM36 (ENSCPRG00005015549) CDKN2B (ENSCPRG00005015556) ENSCPRG00005015559 ENSCPRG00005015560 MTAP (ENSCPRG00005015561) ENSCPRG00005015564 HACD4 (ENSCPRG00005015566) ##22 FOCAD (ENSCPRG00005000175) MLLT3 (ENSCPRG00005000317) ENSCPRG00005000342 SLC24A2 (ENSCPRG00005000396) ##24 ACER2 (ENSCPRG00005000407) ENSCPRG00005000421 DENND4C (ENSCPRG00005000460) PLIN2 (ENSCPRG00005000506) HAUS6 (ENSCPRG00005000520) SAXO1 (ENSCPRG00005000531) ADAMTSL1 (ENSCPRG00005000579) SH3GL2 (ENSCPRG00005000664) CNTLN (ENSCPRG00005000737) BNC2 (ENSCPRG00005000801) CCDC171 (ENSCPRG00005000836) Cryptodira ANCESTRAL SPECIES 63 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Testudinoidea ANCESTRAL SPECIES 7 ENSGT00940000161348 ENSGT00940000154422 ENSGT00940000161970 ENSGT00950000183083.a.d.b ENSGT00940000158510 ENSGT00940000162569.b ENSGT00390000013287 ENSGT00940000153241.A ENSGT01030000234519.e.a.a.a.a.b ENSGT01030000234519.e.a.a.a.a.a ENSGT00940000159488 ENSGT01000000214430.c.b.a.b.a.b ENSGT01000000214430.c.b.b.b.b.b ENSGT01000000214430.c.a.a.a.a ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Emydidae ANCESTRAL SPECIES 20 ENSGT00940000161348 ENSGT00940000154422 ENSGT00940000161970 ENSGT00950000183083.a.d.b ENSGT00940000158510 ENSGT00940000161347 ENSGT00390000013287 ENSGT00940000153241.A ENSGT01030000234519.e.a.a.a.a.b ENSGT01030000234519.e.a.a.a.a.a ENSGT00940000159488 ENSGT01000000214430.c.b.a.b.a.b.d ENSGT01000000214430.c.b.b.b.b.b ENSGT01000000214430.c.a.a.a.a ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 painted turtle MODERN SPECIES 705 ENSCPBG00000019108 CEP78 (ENSCPBG00000019104) PSAT1 (ENSCPBG00000019096) TLE4 (ENSCPBG00000019087) TLE1 (ENSCPBG00000019082) RASEF (ENSCPBG00000019037) ENSCPBG00000019035 ENSCPBG00000019034 ENSCPBG00000019030 ENSCPBG00000019028 ENSCPBG00000019027 ENSCPBG00000019024 ENSCPBG00000019023 ENSCPBG00000019022 ENSCPBG00000019021 HACD4 (ENSCPBG00000019016) ##22 FOCAD (ENSCPBG00000018996) MLLT3 (ENSCPBG00000018979) SLC24A2 (ENSCPBG00000018965) ##24 ACER2 (ENSCPBG00000018962) ENSCPBG00000018961 ENSCPBG00000018959 DENND4C (ENSCPBG00000018955) PLIN2 (ENSCPBG00000018949) HAUS6 (ENSCPBG00000018939) ADAMTSL1 (ENSCPBG00000018927) ENSCPBG00000018923 ENSCPBG00000018920 Three-toed box turtle MODERN SPECIES 50 GCNT1 (ENSTMTG00000020794) PRUNE2 (ENSTMTG00000020608) FOXB2 (ENSTMTG00000020568) VPS13A (ENSTMTG00000020491) GNA14 (ENSTMTG00000020468) GNAQ (ENSTMTG00000020463) CEP78 (ENSTMTG00000020456) ENSTMTG00000020447 PSAT1 (ENSTMTG00000020439) ENSTMTG00000020432 ENSTMTG00000020413 TLE1 (ENSTMTG00000020394) RASEF (ENSTMTG00000020204) ENSTMTG00000020174 ENSTMTG00000020167 HACD4 (ENSTMTG00000020159) ##22 FOCAD (ENSTMTG00000017986) ENSTMTG00000017737 MLLT3 (ENSTMTG00000017725) ENSTMTG00000017693 SLC24A2 (ENSTMTG00000017671) ##24 ACER2 (ENSTMTG00000017654) ENSTMTG00000017639 DENND4C (ENSTMTG00000017478) PLIN2 (ENSTMTG00000017440) HAUS6 (ENSTMTG00000017410) SAXO1 (ENSTMTG00000017388) ENSTMTG00000017369 ENSTMTG00000017350 ENSTMTG00000017328 ENSTMTG00000017184 Testudinidae ANCESTRAL SPECIES 15 ENSGT00940000161348 ENSGT00940000154422 ENSGT00940000161970 ENSGT00950000183083.a.d.b ENSGT00940000158510 ENSGT00940000162569.b ENSGT00390000013287 ENSGT00940000153241.A ENSGT01030000234519.e.a.a.a.a.b ENSGT01030000234519.e.a.a.a.a.a ENSGT00940000159488 ENSGT01000000214430.c.b.a.b.a.b ENSGT01000000214430.c.b.b.b.b.b ENSGT01000000214430.c.a.a.a.a ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT01000000214430.c.b.a.a.a.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Abingdon island giant tortoise MODERN SPECIES 2006 GNG4 (ENSCABG00000015638) ENSCABG00000015646 ENSCABG00000015649 ENSCABG00000015654 ENSCABG00000015656 HACD4 (ENSCABG00000015661) ##22 FOCAD (ENSCABG00000015684) ENSCABG00000016183 ENSCABG00000016184 ENSCABG00000016185 SLC24A2 (ENSCABG00000016186) ##24 ENSCABG00000016187 ACER2 (ENSCABG00000016188) ENSCABG00000016190 ENSCABG00000016191 DENND4C (ENSCABG00000016192) PLIN2 (ENSCABG00000016193) HAUS6 (ENSCABG00000016194) SAXO1 (ENSCABG00000016196) ADAMTSL1 (ENSCABG00000016198) ENSCABG00000016201 Goode s thornscrub tortoise MODERN SPECIES 20 PSAT1 (ENSGEVG00005020848) ENSGEVG00005020845 ENSGEVG00005020844 TLE4 (ENSGEVG00005020789) ENSGEVG00005020771 TLE1 (ENSGEVG00005020765) RASEF (ENSGEVG00005020748) ENSGEVG00005020731 ENSGEVG00005020726 ENSGEVG00005020725 ENSGEVG00005020720 ENSGEVG00005020719 ENSGEVG00005020713 ENSGEVG00005020712 ENSGEVG00005020710 HACD4 (ENSGEVG00005020706) ##22 FOCAD (ENSGEVG00005020652) ENSGEVG00005020631 ENSGEVG00005020628 ENSGEVG00005020624 SLC24A2 (ENSGEVG00005020618) ##24 ENSGEVG00005020615 ENSGEVG00005020612 ACER2 (ENSGEVG00005020609) ENSGEVG00005020605 DENND4C (ENSGEVG00005020568) PLIN2 (ENSGEVG00005020553) HAUS6 (ENSGEVG00005020541) SAXO1 (ENSGEVG00005020536) ENSGEVG00005020522 ENSGEVG00005020514 Chinese turtle MODERN SPECIES 1598 ENSPSIG00000001024 ENSPSIG00000018212 HACD4 (ENSPSIG00000018226) ##22 FOCAD (ENSPSIG00000018232) MLLT3 (ENSPSIG00000007987) SLC24A2 (ENSPSIG00000007999) ##24 ACER2 (ENSPSIG00000008125) ENSPSIG00000008147 DENND4C (ENSPSIG00000008765) PLIN2 (ENSPSIG00000009218) HAUS6 (ENSPSIG00000009630) SAXO1 (ENSPSIG00000009996) ADAMTSL1 (ENSPSIG00000009998) SH3GL2 (ENSPSIG00000011372) ENSPSIG00000011671 Lepidosauria ANCESTRAL SPECIES 1 ENSGT00390000005644 ENSGT01000000214430.d ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.c ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 Episquamata ANCESTRAL SPECIES 6 ENSGT01000000214430.d.a ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000163078 ENSGT00940000162423 ENSGT00950000182991.B ENSGT01000000214430.c ENSGT00990000211106 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT00390000007924 Laterata ANCESTRAL SPECIES 7 ENSGT01000000214430.d.a ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.c ENSGT00990000211106 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 Common wall lizard MODERN SPECIES 8 SMARCA2 (ENSPMRG00000021519) DMRT2 (ENSPMRG00000021499) DMRT3 (ENSPMRG00000021491) DMRT1 (ENSPMRG00000021487) KANK1 (ENSPMRG00000021475) CDKN2B (ENSPMRG00000021467) CDKN2A (ENSPMRG00000021465) MTAP (ENSPMRG00000021457) ENSPMRG00000021447 ENSPMRG00000021439 ENSPMRG00000021432 ENSPMRG00000021428 ENSPMRG00000021420 ENSPMRG00000021401 ENSPMRG00000021394 HACD4 (ENSPMRG00000021384) ##22 FOCAD (ENSPMRG00000021060) MLLT3 (ENSPMRG00000020993) ENSPMRG00000020990 SLC24A2 (ENSPMRG00000020979) ##24 ACER2 (ENSPMRG00000020973) ENSPMRG00000020962 DENND4C (ENSPMRG00000020947) PLIN2 (ENSPMRG00000020937) ENSPMRG00000020930 HAUS6 (ENSPMRG00000020914) SAXO1 (ENSPMRG00000020903) ADAMTSL1 (ENSPMRG00000020846) ENSPMRG00000022220 ENSPMRG00000022213 CNTLN (ENSPMRG00000022132) Argentine black and white tegu MODERN SPECIES 55 ENSSMRG00000006299 ENSSMRG00000006309 ENSSMRG00000006318 HACD4 (ENSSMRG00000006329) ##22 FOCAD (ENSSMRG00000006408) MLLT3 (ENSSMRG00000006460) SLC24A2 (ENSSMRG00000006485) ##24 ACER2 (ENSSMRG00000006492) ENSSMRG00000006495 DENND4C (ENSSMRG00000006507) UHRF2 (ENSSMRG00000006533) GLDC (ENSSMRG00000006545) ENSSMRG00000006563 KDM4C (ENSSMRG00000006595) PTPRD (ENSSMRG00000006679) ENSSMRG00000006709 TYRP1 (ENSSMRG00000006715) LURAP1L (ENSSMRG00000006726) MPDZ (ENSSMRG00000006736) Toxicofera ANCESTRAL SPECIES 6 ENSGT00390000005644 ENSGT01000000214430.d.a ENSGT01050000244898.a.a.a.b ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000163078 ENSGT00940000162423 ENSGT00950000182991.B ENSGT01000000214430.c ENSGT00990000211106 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT00390000007924 Elapidae ANCESTRAL SPECIES 7 ENSGT00390000014547 ENSGT00940000158840.c ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000163078 ENSGT00940000162423 ENSGT00950000182991.B ENSGT01000000214430.c.g.b ENSGT01000000214430.c.h.a.a ENSGT00990000211106 ENSGT01000000214430.d.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243.k ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b.c ENSGT01060000248998 ENSGT00390000007924 Elapidae_a ANCESTRAL SPECIES 121 ENSGT01000000214430.c.h.a.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215.g.a ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243.k ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b.c ENSGT00390000007924 ENSGT00940000154706 Acanthophiinae ANCESTRAL SPECIES 118 ENSGT01000000214430.c.h.a.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215.g.a ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243.k ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b.c ENSGT00390000007924 ENSGT00940000154706 Eastern brown snake MODERN SPECIES 105 ENSPTXG00000017230 HACD4 (ENSPTXG00000017228) ##22 FOCAD (ENSPTXG00000015839) MLLT3 (ENSPTXG00000015801) SLC24A2 (ENSPTXG00000015792) ##24 ACER2 (ENSPTXG00000015791) ENSPTXG00000015790 DENND4C (ENSPTXG00000015784) PLIN2 (ENSPTXG00000015781) HAUS6 (ENSPTXG00000015778) SAXO1 (ENSPTXG00000015764) ENSPTXG00000015756 ENSPTXG00000015755 ENSPTXG00000015747 CNTLN (ENSPTXG00000015746) BNC2 (ENSPTXG00000015745) CCDC171 (ENSPTXG00000015744) Mainland tiger snake MODERN SPECIES 129 ENSNSUG00000011541 HACD4 (ENSNSUG00000011540) ##22 FOCAD (ENSNSUG00000011537) ENSNSUG00000011536 ENSNSUG00000011532 ENSNSUG00000011530 ENSNSUG00000011528 SLC24A2 (ENSNSUG00000011521) ##24 ACER2 (ENSNSUG00000011520) ENSNSUG00000011495 ENSNSUG00000011489 ENSNSUG00000011486 PLIN2 (ENSNSUG00000011483) ENSNSUG00000011481 SAXO1 (ENSNSUG00000011476) ENSNSUG00000011470 ENSNSUG00000011466 Blue-lipped sea krait MODERN SPECIES 6071 HACD4 (ENSLLTG00000009870) ##22 Indian cobra MODERN SPECIES 1 MTAP (ENSNNAG00000013279) ENSNNAG00000013303 ENSNNAG00000013319 ENSNNAG00000013344 ENSNNAG00000013368 ENSNNAG00000007198 ENSNNAG00000007342 ENSNNAG00000007356 ENSNNAG00000007373 ENSNNAG00000007387 ENSNNAG00000007397 ENSNNAG00000007412 ENSNNAG00000007428 ENSNNAG00000007437 ENSNNAG00000007453 HACD4 (ENSNNAG00000007473) ##22 FOCAD (ENSNNAG00000007710) ENSNNAG00000009933 ENSNNAG00000009954 ENSNNAG00000009987 ENSNNAG00000010011 SLC24A2 (ENSNNAG00000010044) ##24 ACER2 (ENSNNAG00000010168) ENSNNAG00000010218 DENND4C (ENSNNAG00000010308) PLIN2 (ENSNNAG00000010835) HAUS6 (ENSNNAG00000010895) SAXO1 (ENSNNAG00000011242) ENSNNAG00000011280 ENSNNAG00000011353 ENSNNAG00000011422 Lizard MODERN SPECIES 1 ENSACAG00000043694 ELAVL2 (ENSACAG00000017521) ENSACAG00000043252 DMRTA1 (ENSACAG00000017537) ENSACAG00000017544 MTAP (ENSACAG00000017549) ENSACAG00000027003 ENSACAG00000024853 ENSACAG00000017572 ENSACAG00000025902 ENSACAG00000017580 ENSACAG00000042281 ENSACAG00000043191 ENSACAG00000026778 ENSACAG00000037340 HACD4 (ENSACAG00000028887) ##22 FOCAD (ENSACAG00000017585) MLLT3 (ENSACAG00000017614) SLC24A2 (ENSACAG00000017625) ##24 ACER2 (ENSACAG00000017629) ENSACAG00000017634 DENND4C (ENSACAG00000017643) ENSACAG00000044236 PLIN2 (ENSACAG00000017672) ENSACAG00000017699 ENSACAG00000043214 ENSACAG00000041325 ENSACAG00000035607 LINGO2 (ENSACAG00000010691) ENSACAG00000036679 ENSACAG00000038569 tuatara MODERN SPECIES 343 HACD4 (ENSSPUG00000018026) ##22 FOCAD (ENSSPUG00000017993) ENSSPUG00000017977 ENSSPUG00000017971 SLC24A2 (ENSSPUG00000017966) ##24 ACER2 (ENSSPUG00000017959) ENSSPUG00000017955 DENND4C (ENSSPUG00000017935) PLIN2 (ENSSPUG00000017923) ENSSPUG00000017918 ENSSPUG00000017908 ENSSPUG00000017894 SAXO1 (ENSSPUG00000017885) ENSSPUG00000017874 ENSSPUG00000017867 ENSSPUG00000017851 Mammalia ANCESTRAL SPECIES 24 ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Theria ANCESTRAL SPECIES 30 ENSGT00940000165347 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Marsupialia ANCESTRAL SPECIES 6 ENSGT00940000165347 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423.a ENSGT00940000165099 ENSGT00950000182991.B ENSGT01000000214430.a.a.a.c.a.a ENSGT01000000214430.a.a.a.c.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00940000155007 ENSGT00940000153558.b ENSGT00940000156806 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000157888 ENSGT00940000158331 ENSGT00390000011081 ENSGT00950000182907.a.b.b.a ENSGT00390000004522 ENSGT00940000154420.A ENSGT00390000004643 Opossum MODERN SPECIES 5 ENSMODG00000047560 ELAVL2 (ENSMODG00000003936) ENSMODG00000003880 DMRTA1 (ENSMODG00000003829) CDKN2B (ENSMODG00000040122) CDKN2A (ENSMODG00000003820) MTAP (ENSMODG00000003781) ifn2 (ENSMODG00000042457) ENSMODG00000042661 ENSMODG00000003707 ENSMODG00000045309 ifn4 (ENSMODG00000049005) ifn7 (ENSMODG00000038103) ENSMODG00000003667 ifn1 (ENSMODG00000025165) HACD4 (ENSMODG00000003655) ##22 FOCAD (ENSMODG00000003634) ENSMODG00000038835 ENSMODG00000039561 ENSMODG00000003574 ENSMODG00000010337 ENSMODG00000024948 SLC24A2 (ENSMODG00000003525) ##24 ENSMODG00000003439 DNAJA1 (ENSMODG00000003384) APTX (ENSMODG00000003365) TMEFF1 (ENSMODG00000003346) CAVIN4 (ENSMODG00000049552) PTPN3 (ENSMODG00000003330) EPB41L4B (ENSMODG00000003302) NANS (ENSMODG00000003270) Marsupialia_b ANCESTRAL SPECIES 18 ENSGT01000000214430.a.a.a.c.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00940000155007 ENSGT00940000153558.b ENSGT00940000156806 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000157888 ENSGT00940000158331 ENSGT00390000011081 ENSGT00950000182907.a.b.b.a ENSGT00390000004522 ENSGT00940000154420.A ENSGT00390000004643 Diprotodontia ANCESTRAL SPECIES 14 ENSGT01000000214430.a.a.a.c.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00940000155007 ENSGT00940000153558.b ENSGT00940000156806 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000157888 ENSGT00940000158331 ENSGT00390000011081 ENSGT00950000182907.a.b.b.a ENSGT00390000004522 ENSGT00390000004643 ENSGT00940000157140.b.a.b.a Diprotodontia_a ANCESTRAL SPECIES 13 ENSGT01000000214430.a.a.a.c.b.b.b.a.a ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.c.b.b.a.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00940000155007 ENSGT00940000153558.b ENSGT00940000156806 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000157888 ENSGT00940000158331 ENSGT00390000011081 ENSGT00950000182907.a.b.b.a ENSGT00390000004522 ENSGT00390000004643 ENSGT00940000162270 Common wonbat MODERN SPECIES 903 ENSVURG00010012477 ENSVURG00010012449 HACD4 (ENSVURG00010012441) ##22 FOCAD (ENSVURG00010012373) ENSVURG00010012345 MLLT3 (ENSVURG00010012316) SLC24A2 (ENSVURG00010012288) ##24 SMU1 (ENSVURG00010012273) ENSVURG00010012265 APTX (ENSVURG00010012261) TMEFF1 (ENSVURG00010012209) CAVIN4 (ENSVURG00010012193) PTPN3 (ENSVURG00010012117) ENSVURG00010012050 NANS (ENSVURG00010012037) ANP32B (ENSVURG00010012016) TRMO (ENSVURG00010012005) FOXE1 (ENSVURG00010011999) koala MODERN SPECIES 252 ENSPCIG00000029889 CDC42SE2 (ENSPCIG00000037457) ENSPCIG00000036928 ENSPCIG00000008998 ENSPCIG00000036197 ENSPCIG00000036951 ENSPCIG00000022733 ENSPCIG00000034005 ENSPCIG00000033177 ENSPCIG00000036788 ENSPCIG00000034589 ENSPCIG00000033027 ENSPCIG00000037209 ENSPCIG00000033353 ENSPCIG00000035870 HACD4 (ENSPCIG00000029881) ##22 ENSPCIG00000029879 FOCAD (ENSPCIG00000029869) ENSPCIG00000031681 Wallaby MODERN SPECIES 9527 ENSMEUG00000013512 ##22 Tasmanian devil MODERN SPECIES EFNA5 (ENSSHAG00000024211) NUDT12 (ENSSHAG00000003181) ENSSHAG00000029665 MACIR (ENSSHAG00000031554) PPIP5K2 (ENSSHAG00000001399) GIN1 (ENSSHAG00000000694) PAM (ENSSHAG00000022133) ENSSHAG00000001507 ENSSHAG00000031750 ENSSHAG00000026188 ENSSHAG00000026686 ENSSHAG00000001053 ENSSHAG00000017733 ENSSHAG00000017686 ENSSHAG00000017649 HACD4 (ENSSHAG00000017465) ##22 FOCAD (ENSSHAG00000016944) MLLT3 (ENSSHAG00000016108) ENSSHAG00000013071 ##24 ENSSHAG00000012520 ENSSHAG00000012366 ENSSHAG00000012205 ENSSHAG00000010984 ENSSHAG00000010897 ENSSHAG00000008314 ENSSHAG00000003628 ENSSHAG00000001789 ANP32B (ENSSHAG00000021013) ENSSHAG00000012582 ENSSHAG00000024091 TRMO (ENSSHAG00000031309) Eutheria ANCESTRAL SPECIES 7 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Atlantogenata ANCESTRAL SPECIES 68 ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Xenarthra ANCESTRAL SPECIES ENSGT00530000062962.b.b ##22 Sloth MODERN SPECIES 7067 HACD4 (ENSCHOG00000005608) ##22 Afrotheria ANCESTRAL SPECIES 116 ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Tenrec MODERN SPECIES 6529 HACD4 (ENSETEG00000001160) ##22 FOCAD (ENSETEG00000001146) MLLT3 (ENSETEG00000001142) Afrotheria_a ANCESTRAL SPECIES 118 ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Hyrax MODERN SPECIES 11511 HACD4 (ENSPCAG00000001242) ##22 Elephant MODERN SPECIES 472 IZUMO3 (ENSLAFG00000006472) ENSLAFG00000026655 ELAVL2 (ENSLAFG00000009938) DMRTA1 (ENSLAFG00000013860) CDKN2B (ENSLAFG00000022894) ENSLAFG00000009554 MTAP (ENSLAFG00000009552) ENSLAFG00000031123 ENSLAFG00000027976 ENSLAFG00000030457 ENSLAFG00000029104 ENSLAFG00000032074 ENSLAFG00000026307 ENSLAFG00000032702 IFNB1 (ENSLAFG00000031186) HACD4 (ENSLAFG00000011684) ##22 FOCAD (ENSLAFG00000011670) MLLT3 (ENSLAFG00000002042) SLC24A2 (ENSLAFG00000017523) ##24 ACER2 (ENSLAFG00000010767) ENSLAFG00000010766 DENND4C (ENSLAFG00000010751) PLIN2 (ENSLAFG00000011091) HAUS6 (ENSLAFG00000011084) RRAGA (ENSLAFG00000011082) SAXO1 (ENSLAFG00000011081) ADAMTSL1 (ENSLAFG00000011076) SH3GL2 (ENSLAFG00000005475) CNTLN (ENSLAFG00000007075) ENSLAFG00000027513 ENSLAFG00000021349 Boreoeutheria ANCESTRAL SPECIES 10 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Laurasiatheria ANCESTRAL SPECIES 9 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 Laurasiatheria_a ANCESTRAL SPECIES 11 ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000167452 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Laurasiatheria_b ANCESTRAL SPECIES 11 ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000167452 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Laurasiatheria_c ANCESTRAL SPECIES 11 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.r ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Equus ANCESTRAL SPECIES 37 ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.q ENSGT00950000182991.B.r.a ENSGT00950000182991.B.r.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.b.a ENSGT00940000154359.e ENSGT01000000214430.a.b.r ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b.q ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00940000154847.j ENSGT00440000034932 ENSGT00390000005844.a.b Donkey MODERN SPECIES 15 ENSEASG00005038182 ENSEASG00005032526 ENSEASG00005035161 ENSEASG00005027880 ENSEASG00005031350 ENSEASG00005027698 ENSEASG00005031524 ENSEASG00005030052 ENSEASG00005025726 ENSEASG00005027292 ENSEASG00005033651 ENSEASG00005028171 ENSEASG00005023535 ENSEASG00005023607 ENSEASG00005034932 HACD4 (ENSEASG00005018737) ##22 FOCAD (ENSEASG00005018789) ENSEASG00005038410 ENSEASG00005038180 MLLT3 (ENSEASG00005019193) ENSEASG00005019199 SLC24A2 (ENSEASG00005019206) ##24 ACER2 (ENSEASG00005019215) RPS6 (ENSEASG00005019216) DENND4C (ENSEASG00005019226) PLIN2 (ENSEASG00005019242) HAUS6 (ENSEASG00005019247) RRAGA (ENSEASG00005023970) SAXO1 (ENSEASG00005019269) ADAMTSL1 (ENSEASG00005019273) SH3GL2 (ENSEASG00005019277) Horse MODERN SPECIES 15 DMRTA1 (ENSECAG00000019138) CDKN2A (ENSECAG00000018552) ENSECAG00000060049 ENSECAG00000040430 ENSECAG00000033009 ENSECAG00000037786 IFNE (ENSECAG00000004315) ENSECAG00000054830 ENSECAG00000031604 IFN-OMEGA2 (ENSECAG00000036561) KLHL9 (ENSECAG00000005817) ENSECAG00000047150 IF1CA2 (ENSECAG00000042982) IF1CA1 (ENSECAG00000040808) IF1DA2 (ENSECAG00000057166) HACD4 (ENSECAG00000000343) ##22 FOCAD (ENSECAG00000001130) MLLT3 (ENSECAG00000023631) RPL26 (ENSECAG00000015757) SLC24A2 (ENSECAG00000020101) ##24 ACER2 (ENSECAG00000017054) RPS6 (ENSECAG00000016190) ENSECAG00000006417 DENND4C (ENSECAG00000000298) PLIN2 (ENSECAG00000024663) HAUS6 (ENSECAG00000014686) RRAGA (ENSECAG00000005729) SAXO1 (ENSECAG00000011294) ENSECAG00000059197 ADAMTSL1 (ENSECAG00000015972) SH3GL2 (ENSECAG00000009922) Chiroptera ANCESTRAL SPECIES 40 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.r ENSGT01000000214430.a.a.b ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Megabat MODERN SPECIES 2948 HACD4 (ENSPVAG00000006850) ##22 FOCAD (ENSPVAG00000006849) Microchiroptera ANCESTRAL SPECIES 36 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.r ENSGT01000000214430.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Greater horseshoe bat MODERN SPECIES 3 ENSRFEG00010007503 IFNE (ENSRFEG00010007517) ENSRFEG00010007530 ENSRFEG00010007545 ENSRFEG00010007618 ENSRFEG00010007636 ENSRFEG00010007711 ENSRFEG00010007732 ENSRFEG00010007820 KLHL9 (ENSRFEG00010007851) ENSRFEG00010007861 ENSRFEG00010007907 ENSRFEG00010007954 ENSRFEG00010007995 IFNB1 (ENSRFEG00010008047) HACD4 (ENSRFEG00010008060) ##22 FOCAD (ENSRFEG00010008104) MLLT3 (ENSRFEG00010008212) SLC24A2 (ENSRFEG00010008386) ##24 ENSRFEG00010008467 ACER2 (ENSRFEG00010008505) RPS6 (ENSRFEG00010008554) DENND4C (ENSRFEG00010008632) PLIN2 (ENSRFEG00010008729) HAUS6 (ENSRFEG00010008787) RRAGA (ENSRFEG00010008891) SAXO1 (ENSRFEG00010008917) ADAMTSL1 (ENSRFEG00010009043) SH3GL2 (ENSRFEG00010009214) CNTLN (ENSRFEG00010009257) BNC2 (ENSRFEG00010009307) Microbat MODERN SPECIES 1158 CDKN2A (ENSMLUG00000029865) ENSMLUG00000024291 ENSMLUG00000030508 MTAP (ENSMLUG00000014410) IFNE (ENSMLUG00000010970) ENSMLUG00000027376 ENSMLUG00000024850 ENSMLUG00000028931 ENSMLUG00000027612 ENSMLUG00000030465 ENSMLUG00000023736 ENSMLUG00000027734 ENSMLUG00000026947 KLHL9 (ENSMLUG00000007175) IFNB1 (ENSMLUG00000008021) HACD4 (ENSMLUG00000003980) ##22 FOCAD (ENSMLUG00000003955) MLLT3 (ENSMLUG00000003947) SLC24A2 (ENSMLUG00000017667) ##24 Carnivora ANCESTRAL SPECIES 18 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000167452 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Felidae ANCESTRAL SPECIES 16 ENSGT00950000183152.A.v ENSGT00940000156823.e ENSGT00390000008732.a.a.c.b.a ENSGT00390000012138.a.a.i.a.a ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.jb.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Panthera ANCESTRAL SPECIES 11 ENSGT00390000013920 ENSGT00390000017601 ENSGT00950000183152.A.v ENSGT00940000156823.e ENSGT00390000008732.a.a.c.b.a ENSGT00390000012138.a.a.i.a.a ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.jb.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Tiger MODERN SPECIES 588 IFT74 (ENSPTIG00000018434) LRRC19 (ENSPTIG00000019449) PLAA (ENSPTIG00000019644) CAAP1 (ENSPTIG00000020860) IZUMO3 (ENSPTIG00000021039) ENSPTIG00000006398 ELAVL2 (ENSPTIG00000005627) DMRTA1 (ENSPTIG00000008302) ENSPTIG00000009528 MTAP (ENSPTIG00000010060) IFNE (ENSPTIG00000006483) ENSPTIG00000006494 ENSPTIG00000012484 ENSPTIG00000015362 IFNB1 (ENSPTIG00000006556) HACD4 (ENSPTIG00000016456) ##22 FOCAD (ENSPTIG00000016961) ENSPTIG00000019535 ENSPTIG00000006649 ENSPTIG00000019938 SLC24A2 (ENSPTIG00000006232) ##24 ACER2 (ENSPTIG00000009123) RPS6 (ENSPTIG00000009901) DENND4C (ENSPTIG00000011537) PLIN2 (ENSPTIG00000012619) HAUS6 (ENSPTIG00000013541) RRAGA (ENSPTIG00000006849) SAXO1 (ENSPTIG00000016509) ADAMTSL1 (ENSPTIG00000017390) SH3GL2 (ENSPTIG00000008377) CNTLN (ENSPTIG00000009406) Panthera_a ANCESTRAL SPECIES 60 ENSGT01000000214430.a.a.a.a.a.a.b.e.a ENSGT01000000214430.a.a.a.a.a.b.jb.b ENSGT01000000214430.a.a.a.a.a.a.b.e.b ENSGT01000000214430.a.a.a.a.a.a.b.f.a ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b lion MODERN SPECIES 13 AOPEP (ENSPLOG00000009897) FANCC (ENSPLOG00000009864) PTCH1 (ENSPLOG00000009736) ERCC6L2 (ENSPLOG00000009574) ENSPLOG00000009543 HSD17B3 (ENSPLOG00000009419) SLC35D2 (ENSPLOG00000009228) ZNF367 (ENSPLOG00000009156) HABP4 (ENSPLOG00000009107) ENSPLOG00000008892 PRXL2C (ENSPLOG00000008735) ENSPLOG00000008712 ENSPLOG00000008697 ENSPLOG00000008664 ENSPLOG00000008634 HACD4 (ENSPLOG00000008580) ##22 FOCAD (ENSPLOG00000008398) MLLT3 (ENSPLOG00000008272) SLC24A2 (ENSPLOG00000008118) ##24 ACER2 (ENSPLOG00000008065) ENSPLOG00000008039 RPS6 (ENSPLOG00000007999) DENND4C (ENSPLOG00000007889) PLIN2 (ENSPLOG00000007840) HAUS6 (ENSPLOG00000007785) RRAGA (ENSPLOG00000007764) SAXO1 (ENSPLOG00000007710) ADAMTSL1 (ENSPLOG00000007398) SH3GL2 (ENSPLOG00000007300) CNTLN (ENSPLOG00000007270) ENSPLOG00000007241 leopard MODERN SPECIES 65 ENSPPRG00000003827 ENSPPRG00000003115 ENSPPRG00000002656 ENSPPRG00000021961 IFNB1 (ENSPPRG00000021934) HACD4 (ENSPPRG00000001657) ##22 FOCAD (ENSPPRG00000001545) ENSPPRG00000000619 MLLT3 (ENSPPRG00000000472) SLC24A2 (ENSPPRG00000000154) ##24 ACER2 (ENSPPRG00000023178) ENSPPRG00000023215 RPS6 (ENSPPRG00000023571) DENND4C (ENSPPRG00000023874) PLIN2 (ENSPPRG00000021465) HAUS6 (ENSPPRG00000021239) RRAGA (ENSPPRG00000021236) SAXO1 (ENSPPRG00000018241) ADAMTSL1 (ENSPPRG00000017489) SH3GL2 (ENSPPRG00000014326) CNTLN (ENSPPRG00000014202) Cat MODERN SPECIES 244 IZUMO3 (ENSFCAG00000015750) ENSFCAG00000025255 ELAVL2 (ENSFCAG00000011976) ENSFCAG00000040593 ENSFCAG00000040447 DMRTA1 (ENSFCAG00000014743) ENSFCAG00000038878 CDKN2A (ENSFCAG00000022826) MTAP (ENSFCAG00000038221) IFNW12 (ENSFCAG00000044935) IFNA7 (ENSFCAG00000046651) IFNA13 (ENSFCAG00000045072) KLHL9 (ENSFCAG00000012623) ENSFCAG00000023458 IFNB1 (ENSFCAG00000004604) HACD4 (ENSFCAG00000031990) ##22 ENSFCAG00000049870 FOCAD (ENSFCAG00000004596) MLLT3 (ENSFCAG00000023293) ENSFCAG00000048731 SLC24A2 (ENSFCAG00000010086) ##24 ACER2 (ENSFCAG00000002540) RPS6 (ENSFCAG00000002541) DENND4C (ENSFCAG00000001945) PLIN2 (ENSFCAG00000002659) HAUS6 (ENSFCAG00000028281) RRAGA (ENSFCAG00000022742) SAXO1 (ENSFCAG00000004841) ADAMTSL1 (ENSFCAG00000004840) ENSFCAG00000031200 SH3GL2 (ENSFCAG00000004584) Caniformia ANCESTRAL SPECIES 16 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000167452 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Canidae ANCESTRAL SPECIES 9 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.mb.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.mb.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00390000013102.f ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00950000185213 ENSGT00950000185182 ENSGT00940000156243 ENSGT00940000160529 Canis_lupus ANCESTRAL SPECIES 15 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.mb.a.b.a.a.b.b.b.a.b ENSGT01000000214430.a.a.a.a.a.b.mb.a.b.a.a.b.b.b.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00390000013102.f ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00950000185213 ENSGT00950000185182 ENSGT00940000156243 ENSGT00940000160529 Dingo MODERN SPECIES 366 DMRTA1 (ENSCAFG00020013824) CDKN2B (ENSCAFG00020013797) ENSCAFG00020013796 MTAP (ENSCAFG00020013792) IFNE (ENSCAFG00020013779) ENSCAFG00020013776 ENSCAFG00020013769 ENSCAFG00020013761 ENSCAFG00020013757 KLHL9 (ENSCAFG00020013752) ENSCAFG00020013748 ENSCAFG00020013747 ENSCAFG00020013743 ENSCAFG00020013742 ENSCAFG00020013733 HACD4 (ENSCAFG00020013722) ##22 FOCAD (ENSCAFG00020013157) MLLT3 (ENSCAFG00020013068) SLC24A2 (ENSCAFG00020013013) ##24 ACER2 (ENSCAFG00020012988) RPS6 (ENSCAFG00020012985) DENND4C (ENSCAFG00020012952) ENSCAFG00020012946 PLIN2 (ENSCAFG00020012935) HAUS6 (ENSCAFG00020012926) RRAGA (ENSCAFG00020012925) SAXO1 (ENSCAFG00020012924) ENSCAFG00020012910 ENSCAFG00020012903 ENSCAFG00020012896 SH3GL2 (ENSCAFG00020012892) Dog MODERN SPECIES 2 ELAVL2 (ENSCAFG00845016769) ENSCAFG00845016700 DMRTA1 (ENSCAFG00845016666) CDKN2B (ENSCAFG00845016466) MTAP (ENSCAFG00845016288) IFNA7 (ENSCAFG00845016199) ENSCAFG00845016171 ENSCAFG00845016139 ENSCAFG00845016109 ENSCAFG00845016083 ENSCAFG00845015906 ENSCAFG00845016397 IFNA5 (ENSCAFG00845016367) ENSCAFG00845016327 IFNB1 (ENSCAFG00845016293) HACD4 (ENSCAFG00845016235) ##22 FOCAD (ENSCAFG00845015191) MLLT3 (ENSCAFG00845014820) SLC24A2 (ENSCAFG00845014662) ##24 ACER2 (ENSCAFG00845014579) RPS6 (ENSCAFG00845014546) ENSCAFG00845014525 DENND4C (ENSCAFG00845014314) PLIN2 (ENSCAFG00845014245) HAUS6 (ENSCAFG00845014208) RRAGA (ENSCAFG00845014185) SAXO1 (ENSCAFG00845014141) ENSCAFG00845014115 ADAMTSL1 (ENSCAFG00845013926) SH3GL2 (ENSCAFG00845013834) CNTLN (ENSCAFG00845013467) Red fox MODERN SPECIES 36 ENSVVUG00000001342 ENSVVUG00000001339 ENSVVUG00000001330 IFNB1 (ENSVVUG00000001318) HACD4 (ENSVVUG00000001307) ##22 FOCAD (ENSVVUG00000000983) MLLT3 (ENSVVUG00000000911) SLC24A2 (ENSVVUG00000000845) ##24 ACER2 (ENSVVUG00000000814) ENSVVUG00000000801 ENSVVUG00000000779 PLIN2 (ENSVVUG00000000771) DENND4C (ENSVVUG00000000667) HAUS6 (ENSVVUG00000000634) RRAGA (ENSVVUG00000000604) SAXO1 (ENSVVUG00000000588) ENSVVUG00000000571 ADAMTSL1 (ENSVVUG00000000485) SH3GL2 (ENSVVUG00000000404) CNTLN (ENSVVUG00000000301) Caniformia_b ANCESTRAL SPECIES 12 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000167452 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 Mustelinae ANCESTRAL SPECIES 98 ENSGT00940000162423 ENSGT00940000167452 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.pb.a.a ENSGT01000000214430.a.a.a.a.a.b.pb.a.b.a.a.a ENSGT01000000214430.a.a.a.a.a.b.pb.a.b.a.b ENSGT01000000214430.a.a.a.a.a.b.qb ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.pb.b ENSGT01000000214430.a.a.a.a.a.b.pb.a.b.b.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b American mink MODERN SPECIES 117 TUSC1 (ENSNVIG00000012160) IZUMO3 (ENSNVIG00000012191) ELAV2 (ENSNVIG00000012261) DMRTA1 (ENSNVIG00000012357) CDKN2B (ENSNVIG00000012369) MTAP (ENSNVIG00000012386) ENSNVIG00000012437 ENSNVIG00000012457 KLHL9 (ENSNVIG00000012468) ENSNVIG00000012477 ENSNVIG00000012495 ENSNVIG00000012512 ENSNVIG00000012526 ENSNVIG00000012545 IFNB1 (ENSNVIG00000012557) HACD4 (ENSNVIG00000012558) ##22 FOCAD (ENSNVIG00000012579) ENSNVIG00000012773 ENSNVIG00000012786 SLC24A2 (ENSNVIG00000012827) ##24 ACER2 (ENSNVIG00000012884) ENSNVIG00000012899 DENND4C (ENSNVIG00000012940) ENSNVIG00000013145 HAUS6 (ENSNVIG00000013158) RRAGA (ENSNVIG00000013224) SAXO1 (ENSNVIG00000013228) ENSNVIG00000013271 ADAMTSL1 (ENSNVIG00000013284) Ferret MODERN SPECIES 244 ENSMPUG00000019804 ENSMPUG00000019808 ENSMPUG00000019811 ENSMPUG00000019816 ENSMPUG00000019818 IFNG (ENSMPUG00000019499) ENSMPUG00000019506 ENSMPUG00000015980 KLHL9 (ENSMPUG00000019508) ENSMPUG00000015982 ENSMPUG00000019513 ENSMPUG00000019520 ENSMPUG00000019523 ENSMPUG00000019526 IFNB1 (ENSMPUG00000019528) HACD4 (ENSMPUG00000015987) ##22 FOCAD (ENSMPUG00000015988) MLLT3 (ENSMPUG00000015992) SLC24A2 (ENSMPUG00000016008) ##24 ACER2 (ENSMPUG00000016010) ENSMPUG00000016013 DENND4C (ENSMPUG00000016014) Ursidae ANCESTRAL SPECIES 6 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.a.a.a.b.ob ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.nb.a ENSGT01000000214430.a.a.a.a.a.b.nb.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215.c ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Giant Panda MODERN SPECIES 17 ELAVL2 (ENSAMEG00000007555) DMRTA1 (ENSAMEG00000007553) ENSAMEG00000009154 CDKN2B (ENSAMEG00000007545) ENSAMEG00000019101 MTAP (ENSAMEG00000007509) ENSAMEG00000028633 ENSAMEG00000030690 ENSAMEG00000020239 KLHL9 (ENSAMEG00000020249) ENSAMEG00000020238 ENSAMEG00000027172 ENSAMEG00000003028 IFNB1 (ENSAMEG00000020237) ENSAMEG00000026360 HACD4 (ENSAMEG00000003020) ##22 FOCAD (ENSAMEG00000002988) MLLT3 (ENSAMEG00000002954) SLC24A2 (ENSAMEG00000002946) ##24 ACER2 (ENSAMEG00000026399) ENSAMEG00000030301 RPS6 (ENSAMEG00000002925) DENND4C (ENSAMEG00000002859) PLIN2 (ENSAMEG00000002827) HAUS6 (ENSAMEG00000002777) RRAGA (ENSAMEG00000030176) SAXO1 (ENSAMEG00000014021) ADAMTSL1 (ENSAMEG00000010811) SH3GL2 (ENSAMEG00000010823) CNTLN (ENSAMEG00000026276) BNC2 (ENSAMEG00000012362) Ursus ANCESTRAL SPECIES 166 ENSGT01000000214430.a.a.a.a.b.o.b.b ENSGT01000000214430.a.a.a.a.a.b.nb.a ENSGT01000000214430.a.a.a.a.a.b.nb.b.c.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215.c ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b American black bear MODERN SPECIES 1380 ENSUAMG00000009411 ENSUAMG00000009402 HACD4 (ENSUAMG00000009381) ##22 FOCAD (ENSUAMG00000007724) Polar bear MODERN SPECIES 163 KLHL9 (ENSUMAG00000015939) ENSUMAG00000015945 ENSUMAG00000015949 ENSUMAG00000015953 ENSUMAG00000015958 ENSUMAG00000015962 ENSUMAG00000015997 HACD4 (ENSUMAG00000016058) ##22 FOCAD (ENSUMAG00000016208) ENSUMAG00000016821 ENSUMAG00000016826 ENSUMAG00000016829 SLC24A2 (ENSUMAG00000016841) ##24 ACER2 (ENSUMAG00000016866) ENSUMAG00000016872 DENND4C (ENSUMAG00000016925) PLIN2 (ENSUMAG00000017117) ENSUMAG00000017125 HAUS6 (ENSUMAG00000017141) RRAGA (ENSUMAG00000017178) SAXO1 (ENSUMAG00000017184) ENSUMAG00000017219 ENSUMAG00000017257 Artiodactyla ANCESTRAL SPECIES 7 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Suina ANCESTRAL SPECIES 23 ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b.e.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.g ENSGT01000000214430.a.a.a.a.b.e.a ENSGT01000000214430.a.a.a.a.a.a.b.h ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Chacoan peccary MODERN SPECIES 784 ENSCWAG00000013402 ENSCWAG00000013350 ENSCWAG00000013324 ENSCWAG00000013303 ENSCWAG00000013290 ENSCWAG00000013224 ENSCWAG00000013210 ENSCWAG00000013195 KLHL9 (ENSCWAG00000013179) ENSCWAG00000013149 ENSCWAG00000013115 ENSCWAG00000013033 ENSCWAG00000013010 ENSCWAG00000012979 IFNB1 (ENSCWAG00000012961) HACD4 (ENSCWAG00000012927) ##22 FOCAD (ENSCWAG00000012815) MLLT3 (ENSCWAG00000012463) SLC24A2 (ENSCWAG00000012259) ##24 ACER2 (ENSCWAG00000012184) RPS6 (ENSCWAG00000012122) DENND4C (ENSCWAG00000011949) PLIN2 (ENSCWAG00000011890) HAUS6 (ENSCWAG00000011780) RRAGA (ENSCWAG00000011766) SAXO1 (ENSCWAG00000011660) Pig MODERN SPECIES KLHL9 (ENSSSCG00000005150) IFN-ALPHA-4 (ENSSSCG00000059717) IFN-OMEGA-2 (ENSSSCG00000033910) IFN-DELTA-1 (ENSSSCG00000005152) IFN-DELTA-9 (ENSSSCG00000063223) IFN-ALPHA-15 (ENSSSCG00000031149) IFN-DELTA-10 (ENSSSCG00000057852) IFN-OMEGA-6 (ENSSSCG00000051680) IFN-DELTA-11 (ENSSSCG00000060250) ENSSSCG00000050619 IFN-DELTA-4 (ENSSSCG00000058698) IFN-ALPHA-13 (ENSSSCG00000055846) IFN-OMEGA-5 (ENSSSCG00000056145) IFN-ALPHAOMEGA (ENSSSCG00000021504) IFNB1 (ENSSSCG00000005163) HACD4 (ENSSSCG00000005164) ##22 FOCAD (ENSSSCG00000028406) ENSSSCG00000050047 MLLT3 (ENSSSCG00000005166) ENSSSCG00000061715 ENSSSCG00000056042 ENSSSCG00000049786 SLC24A2 (ENSSSCG00000005167) ##24 ACER2 (ENSSSCG00000034213) RPS6 (ENSSSCG00000005169) DENND4C (ENSSSCG00000005170) PLIN2 (ENSSSCG00000035863) HAUS6 (ENSSSCG00000005173) RRAGA (ENSSSCG00000005174) SAXO1 (ENSSSCG00000040408) ADAMTSL1 (ENSSSCG00000040366) Artiodactyla_a ANCESTRAL SPECIES 6 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Camelidae ANCESTRAL SPECIES 5 ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Arabian camel MODERN SPECIES 30 CDKN2B (ENSCDRG00005001668) ENSCDRG00005001648 ENSCDRG00005001627 IFNE (ENSCDRG00005001617) ENSCDRG00005001609 ENSCDRG00005001595 ENSCDRG00005001572 ENSCDRG00005001560 ENSCDRG00005001540 ENSCDRG00005001435 ENSCDRG00005001419 ENSCDRG00005001408 ENSCDRG00005001399 ENSCDRG00005001391 IFNB1 (ENSCDRG00005001381) HACD4 (ENSCDRG00005001352) ##22 FOCAD (ENSCDRG00005001266) MLLT3 (ENSCDRG00005001149) SLC24A2 (ENSCDRG00005001059) ##24 ACER2 (ENSCDRG00005001013) RPS6 (ENSCDRG00005000992) DENND4C (ENSCDRG00005000875) PLIN2 (ENSCDRG00005000820) HAUS6 (ENSCDRG00005000742) RRAGA (ENSCDRG00005000730) SAXO1 (ENSCDRG00005000701) ENSCDRG00005000592 ENSCDRG00005000656 SH3GL2 (ENSCDRG00005000538) CNTLN (ENSCDRG00005000497) BNC2 (ENSCDRG00005000440) Alpaca MODERN SPECIES 1264 HACD4 (ENSVPAG00000006038) ##22 FOCAD (ENSVPAG00000006036) MLLT3 (ENSVPAG00000006035) SLC24A2 (ENSVPAG00000006033) ##24 ENSVPAG00000006032 RPS6 (ENSVPAG00000006030) DENND4C (ENSVPAG00000006028) PLIN2 (ENSVPAG00000006026) HAUS6 (ENSVPAG00000006025) Artiodactyla_b ANCESTRAL SPECIES 7 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Cetacea ANCESTRAL SPECIES 9 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT00940000163158.b.b.a.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m ENSGT01000000214430.a.a.a.a.a.b.z ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.n ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT01000000221453 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Odontoceti ANCESTRAL SPECIES 8 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT00940000163158.b.b.a.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.a ENSGT01000000214430.a.a.a.a.a.b.z ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.a.a.b.m.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT01000000221453 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT01010000230301 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00940000167219 Odontoceti_a ANCESTRAL SPECIES 15 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT00940000163158.b.b.a.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.a ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.a.a.b.m.b.b ENSGT01000000214430.a.a.a.a.a.a.b.m.b.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT01000000221453 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT01010000230301 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00940000167219 Odontoceti_b ANCESTRAL SPECIES 8 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00390000007370.j ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT00940000163158.b.b.a.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.a ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.a.a.b.m.b.b ENSGT01000000214430.a.a.a.a.a.a.b.m.b.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT01000000221453 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT01010000230301 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00940000167219 Monodontidae ANCESTRAL SPECIES 5 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00390000007370.j ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT00940000163158.b.b.a.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.a ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.b.k.a ENSGT01000000214430.a.a.a.a.a.a.b.m.b.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT01000000221453 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00940000167219 ENSGT00440000034932 Narwhal MODERN SPECIES 312 ENSMMNG00015015785 CDKN2B (ENSMMNG00015015802) CDKN2A (ENSMMNG00015015826) MTAP (ENSMMNG00015015858) ENSMMNG00015015900 IFNE (ENSMMNG00015015924) ENSMMNG00015015943 ENSMMNG00015015959 ENSMMNG00015015976 ENSMMNG00015015997 ENSMMNG00015016023 ENSMMNG00015016051 ENSMMNG00015016081 ENSMMNG00015016113 IFNB1 (ENSMMNG00015016208) HACD4 (ENSMMNG00015016222) ##22 FOCAD (ENSMMNG00015016274) ENSMMNG00015016374 MLLT3 (ENSMMNG00015016437) ENSMMNG00015016541 SLC24A2 (ENSMMNG00015016568) ##24 ACER2 (ENSMMNG00015016658) ENSMMNG00015016682 DENND4C (ENSMMNG00015016748) PLIN2 (ENSMMNG00015016875) HAUS6 (ENSMMNG00015016919) RRAGA (ENSMMNG00015017043) SAXO1 (ENSMMNG00015017061) ADAMTSL1 (ENSMMNG00015017181) SH3GL2 (ENSMMNG00015017433) CNTLN (ENSMMNG00015017488) Beluga whale MODERN SPECIES 50 ENSDLEG00000020732 DMRTA1 (ENSDLEG00000020730) ENSDLEG00000020728 CDKN2A (ENSDLEG00000020727) MTAP (ENSDLEG00000020720) ENSDLEG00000020715 IFNE (ENSDLEG00000020712) ENSDLEG00000020711 ENSDLEG00000020708 ENSDLEG00000020704 ENSDLEG00000020697 ENSDLEG00000020694 ENSDLEG00000020689 ENSDLEG00000020680 IFNB1 (ENSDLEG00000020677) HACD4 (ENSDLEG00000020669) ##22 FOCAD (ENSDLEG00000020454) ENSDLEG00000020429 MLLT3 (ENSDLEG00000020420) SLC24A2 (ENSDLEG00000020410) ##24 ACER2 (ENSDLEG00000020402) ENSDLEG00000020394 DENND4C (ENSDLEG00000020356) PLIN2 (ENSDLEG00000020346) HAUS6 (ENSDLEG00000020327) RRAGA (ENSDLEG00000020323) SAXO1 (ENSDLEG00000020320) ADAMTSL1 (ENSDLEG00000020295) SH3GL2 (ENSDLEG00000020276) ENSDLEG00000020272 CNTLN (ENSDLEG00000020249) Vaquita MODERN SPECIES 17 ENSPSNG00000001333 CDKN2B (ENSPSNG00000001319) CDKN2A (ENSPSNG00000001297) MTAP (ENSPSNG00000001269) ENSPSNG00000001246 IFNE (ENSPSNG00000001235) ENSPSNG00000001205 ENSPSNG00000001196 ENSPSNG00000001176 ENSPSNG00000001161 ENSPSNG00000001145 ENSPSNG00000001130 ENSPSNG00000001121 IFNB1 (ENSPSNG00000001113) ENSPSNG00000001095 HACD4 (ENSPSNG00000001068) ##22 FOCAD (ENSPSNG00000001018) ENSPSNG00000000980 MLLT3 (ENSPSNG00000000909) ENSPSNG00000000874 SLC24A2 (ENSPSNG00000000837) ##24 ENSPSNG00000000805 ACER2 (ENSPSNG00000000791) RPS6 (ENSPSNG00000000767) DENND4C (ENSPSNG00000000715) PLIN2 (ENSPSNG00000000648) HAUS6 (ENSPSNG00000000609) RRAGA (ENSPSNG00000000588) SAXO1 (ENSPSNG00000000559) ADAMTSL1 (ENSPSNG00000000378) SH3GL2 (ENSPSNG00000000201) Dolphin MODERN SPECIES 3754 HACD4 (ENSTTRG00000005314) ##22 Sperm whale MODERN SPECIES 20 IZUMO3 (ENSPCTG00005017059) ELAVL2 (ENSPCTG00005016896) DMRTA1 (ENSPCTG00005016828) CDKN2B (ENSPCTG00005016790) CDKN2A (ENSPCTG00005016737) MTAP (ENSPCTG00005016695) ENSPCTG00005016658 IFNE (ENSPCTG00005016639) ENSPCTG00005016584 ENSPCTG00005016562 ENSPCTG00005016427 ENSPCTG00005016338 ENSPCTG00005016288 ENSPCTG00005016273 IFNB1 (ENSPCTG00005016262) HACD4 (ENSPCTG00005016218) ##22 FOCAD (ENSPCTG00005015965) ENSPCTG00005015884 MLLT3 (ENSPCTG00005015633) ENSPCTG00005015576 SLC24A2 (ENSPCTG00005015305) ##24 ENSPCTG00005015236 ACER2 (ENSPCTG00005015192) RPS6 (ENSPCTG00005015082) DENND4C (ENSPCTG00005014899) PLIN2 (ENSPCTG00005014826) HAUS6 (ENSPCTG00005014663) RRAGA (ENSPCTG00005014645) SAXO1 (ENSPCTG00005014539) ADAMTSL1 (ENSPCTG00005014310) SH3GL2 (ENSPCTG00005014162) Blue whale MODERN SPECIES 17 ENSBMSG00010002649 IFNE (ENSBMSG00010002658) ENSBMSG00010002667 ENSBMSG00010002675 ENSBMSG00010002680 ENSBMSG00010002688 ENSBMSG00010002708 ENSBMSG00010002714 ENSBMSG00010000101 ENSBMSG00010000120 ENSBMSG00010000146 ENSBMSG00010000162 ENSBMSG00010000172 ENSBMSG00010000195 IFNB1 (ENSBMSG00010000216) HACD4 (ENSBMSG00010000241) ##22 FOCAD (ENSBMSG00010000274) ENSBMSG00010000328 MLLT3 (ENSBMSG00010000404) ENSBMSG00010000504 SLC24A2 (ENSBMSG00010000533) ##24 ACER2 (ENSBMSG00010000576) RPS6 (ENSBMSG00010000598) DENND4C (ENSBMSG00010000635) PLIN2 (ENSBMSG00010000722) HAUS6 (ENSBMSG00010000758) RRAGA (ENSBMSG00010000814) SAXO1 (ENSBMSG00010000850) ADAMTSL1 (ENSBMSG00010000917) SH3GL2 (ENSBMSG00010000983) CNTLN (ENSBMSG00010001014) Pecora ANCESTRAL SPECIES 30 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.b ENSGT01000000214430.a.a.a.a.b.h ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Yarkand deer MODERN SPECIES 21 ENSCHYG00000023179 ELAVL2 (ENSCHYG00000023207) DMRTA1 (ENSCHYG00000023312) ENSCHYG00000023337 ENSCHYG00000023368 ENSCHYG00000023395 IFNE (ENSCHYG00000023410) ENSCHYG00000023424 KLHL9 (ENSCHYG00000023441) ENSCHYG00000023454 ENSCHYG00000023495 ENSCHYG00000023566 ENSCHYG00000023573 ENSCHYG00000023588 ENSCHYG00000023601 HACD4 (ENSCHYG00000023620) ##22 FOCAD (ENSCHYG00000023701) MLLT3 (ENSCHYG00000014130) ENSCHYG00000014367 SLC24A2 (ENSCHYG00000014399) ##24 ACER2 (ENSCHYG00000014663) ENSCHYG00000014713 DENND4C (ENSCHYG00000014821) ENSCHYG00000015386 PLIN2 (ENSCHYG00000015475) HAUS6 (ENSCHYG00000015668) RRAGA (ENSCHYG00000015829) SAXO1 (ENSCHYG00000015986) ADAMTSL1 (ENSCHYG00000016203) ENSCHYG00000016808 ENSCHYG00000016858 Percora_a ANCESTRAL SPECIES 24 ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.b ENSGT01000000214430.a.a.a.a.b.h ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.a.a.b.a ENSGT01100000263642 ENSGT01000000214430.a.a.a.b.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00990000211532 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Siberian musk deer MODERN SPECIES 109 ENSMMSG00000001034 ENSMMSG00000001044 ENSMMSG00000001052 ENSMMSG00000001062 ENSMMSG00000001068 ENSMMSG00000001077 ENSMMSG00000001092 ENSMMSG00000001098 ENSMMSG00000001103 ENSMMSG00000001114 ENSMMSG00000001126 ENSMMSG00000001137 ENSMMSG00000001145 HACD4 (ENSMMSG00000001159) ##22 FOCAD (ENSMMSG00000001209) ENSMMSG00000001353 MLLT3 (ENSMMSG00000001379) SLC24A2 (ENSMMSG00000001457) ##24 ENSMMSG00000001522 ENSMMSG00000001530 ACER2 (ENSMMSG00000001538) ENSMMSG00000001558 DENND4C (ENSMMSG00000001593) PLIN2 (ENSMMSG00000001716) HAUS6 (ENSMMSG00000001754) RRAGA (ENSMMSG00000001818) SAXO1 (ENSMMSG00000001832) ADAMTSL1 (ENSMMSG00000001894) ENSMMSG00000002061 Bovidae ANCESTRAL SPECIES 14 ENSGT00550000074944 ENSGT00390000017010 ENSGT01100000266201 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000165099 ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.a.a.b.a ENSGT01100000263642 ENSGT01000000214430.a.a.a.b.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00990000211532 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154445.c.b ENSGT00940000160529 ENSGT00440000034932 Caprinae ANCESTRAL SPECIES 14 ENSGT01000000214430.a.b.m.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154445.c.b ENSGT00940000160529 ENSGT00440000034932 ENSGT01010000222946.d.a Goat MODERN SPECIES 27 ENSCHIG00000013395 ENSCHIG00000010378 ENSCHIG00000009971 ENSCHIG00000009705 ENSCHIG00000010154 ENSCHIG00000011735 ENSCHIG00000010419 ENSCHIG00000010736 ENSCHIG00000015822 ENSCHIG00000012305 ENSCHIG00000012994 ENSCHIG00000025562 ENSCHIG00000002399 ENSCHIG00000013134 ENSCHIG00000002920 HACD4 (ENSCHIG00000006620) ##22 FOCAD (ENSCHIG00000024141) MLLT3 (ENSCHIG00000019549) ENSCHIG00000007895 SLC24A2 (ENSCHIG00000025681) ##24 ACER2 (ENSCHIG00000023132) RPS6 (ENSCHIG00000010409) DENND4C (ENSCHIG00000022814) PLIN2 (ENSCHIG00000013839) HAUS6 (ENSCHIG00000024615) ENSCHIG00000015472 RRAGA (ENSCHIG00000004994) SAXO1 (ENSCHIG00000015222) ADAMTSL1 (ENSCHIG00000025981) SH3GL2 (ENSCHIG00000020328) CNTLN (ENSCHIG00000013033) Rambouillet Sheep MODERN SPECIES 11 ENSOARG00020006836 ENSOARG00020006824 ENSOARG00020006747 ENSOARG00020006730 ENSOARG00020006667 ENSOARG00020006635 ENSOARG00020006624 ENSOARG00020006614 ENSOARG00020006601 ENSOARG00020006572 ENSOARG00020006545 ENSOARG00020006532 ENSOARG00020022842 ENSOARG00020022827 ENSOARG00020022810 HACD4 (ENSOARG00020022780) ##22 FOCAD (ENSOARG00020022657) MLLT3 (ENSOARG00020022520) SLC24A2 (ENSOARG00020022346) ##24 ACER2 (ENSOARG00020022302) RPS6 (ENSOARG00020022265) DENND4C (ENSOARG00020021882) ENSOARG00020021812 PLIN2 (ENSOARG00020021608) RRAGA (ENSOARG00020021439) SAXO1 (ENSOARG00020021405) ADAMTSL1 (ENSOARG00020020780) ENSOARG00020020688 SH3GL2 (ENSOARG00020020587) ENSOARG00020020547 CNTLN (ENSOARG00020019193) Bovinae ANCESTRAL SPECIES 14 ENSGT01000000214430.a.a.a.a.a.b.`b.b.b.b ENSGT01000000214430.a.a.a.a.b.h.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.`b.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.`b.b.b.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.b.k.b.a.b.a ENSGT01100000263642.a ENSGT01000000214430.a.b.l ENSGT01000000214430.a.a.a.b.b ENSGT01000000214430.a.b.k.b.b ENSGT01000000214430.a.b.k.a ENSGT01000000214430.a.a.a.a.b.g.a ENSGT01000000214430.a.b.k.b.a.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00390000009268.eb ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00990000211532 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b.a.a.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154445.c.b ENSGT00940000160529 American bison MODERN SPECIES 3290 HSD17B10 (ENSBBBG00000017170) RIBC1 (ENSBBBG00000017197) SMC1A (ENSBBBG00000008345) ENSBBBG00000017378 ENSBBBG00000017386 ENSBBBG00000008761 ENSBBBG00000017405 ENSBBBG00000008346 ENSBBBG00000017422 HACD4 (ENSBBBG00000017431) ##22 FOCAD (ENSBBBG00000007435) ENSBBBG00000017573 MLLT3 (ENSBBBG00000004360) SLC24A2 (ENSBBBG00000004372) ##24 ENSBBBG00000017663 ACER2 (ENSBBBG00000017674) ENSBBBG00000017694 DENND4C (ENSBBBG00000017798) PLIN2 (ENSBBBG00000017830) HAUS6 (ENSBBBG00000017870) ENSBBBG00000017875 SAXO1 (ENSBBBG00000017886) ADAMTSL1 (ENSBBBG00000008934) SH3GL2 (ENSBBBG00000018088) CNTLN (ENSBBBG00000018243) Bos ANCESTRAL SPECIES 10 ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.`b.b.b.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.b.k.b.a.b.a ENSGT01100000263642.a ENSGT01000000214430.a.b.l ENSGT01000000214430.a.a.a.b.b ENSGT01000000214430.a.b.k.b.a.b.b.a ENSGT01100000263642.b ENSGT01000000214430.a.b.k.b.a.b.b.b ENSGT01000000214430.a.a.a.b.a ENSGT01000000214430.a.b.k.b.b ENSGT01000000214430.a.b.k.a ENSGT01000000214430.a.a.a.a.b.g.a ENSGT01000000214430.a.b.k.b.a.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00390000009268.eb ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00990000211532 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b.a.a.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154445.c.b ENSGT00940000160529 Bos_a ANCESTRAL SPECIES 69 ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.b.a ENSGT01000000214430.a.a.a.a.b.h.a ENSGT01000000214430.a.a.a.a.a.b.`b.b.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.a.a ENSGT01000000214430.a.a.a.a.a.b.`b.b.a.a.b.b.a ENSGT01000000214430.a.a.a.a.a.b.`b.b.a.a.b.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.b.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.b.k.b.a.b.a ENSGT01100000263642.a ENSGT01000000214430.a.b.l ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00390000009268.eb ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b.a.a.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Wild yak MODERN SPECIES 1008 ENSBMUG00000006569 ENSBMUG00000006561 ENSBMUG00000006552 ENSBMUG00000006544 ENSBMUG00000006536 ENSBMUG00000006527 HACD4 (ENSBMUG00000006517) ##22 FOCAD (ENSBMUG00000006478) MLLT3 (ENSBMUG00000006402) ENSBMUG00000006362 ##24 SHROOM4 (ENSBMUG00000006348) BMP15 (ENSBMUG00000006317) ENSBMUG00000006307 ENSBMUG00000006297 Domestic yak MODERN SPECIES 26 ENSBGRG00000002336 ENSBGRG00000002330 ENSBGRG00000002307 ENSBGRG00000002301 ENSBGRG00000002295 ENSBGRG00000002279 ENSBGRG00000002271 ENSBGRG00000002261 ENSBGRG00000002255 ENSBGRG00000002248 ENSBGRG00000002239 ENSBGRG00000002231 ENSBGRG00000002218 ENSBGRG00000002209 ENSBGRG00000002201 HACD4 (ENSBGRG00000002177) ##22 FOCAD (ENSBGRG00000002147) ENSBGRG00000002123 MLLT3 (ENSBGRG00000002074) SLC24A2 (ENSBGRG00000002022) ##24 ACER2 (ENSBGRG00000001992) ENSBGRG00000001975 RPS6 (ENSBGRG00000001942) DENND4C (ENSBGRG00000001896) PLIN2 (ENSBGRG00000001854) ENSBGRG00000001843 HAUS6 (ENSBGRG00000001813) ENSBGRG00000001802 SAXO1 (ENSBGRG00000001788) ADAMTSL1 (ENSBGRG00000001481) SH3GL2 (ENSBGRG00000001359) Bos_b ANCESTRAL SPECIES 3 ENSGT01000000214430.a.a.a.a.a.b.`b.b.a.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.`b.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.b.a ENSGT01000000214430.a.a.a.a.b.h.a ENSGT01000000214430.a.a.a.a.a.b.`b.b.b.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01100000263642.a ENSGT01000000214430.a.b.l ENSGT01000000214430.a.a.a.b.b ENSGT01000000214430.a.b.k.b.b ENSGT01000000214430.a.b.k.a ENSGT01000000214430.a.a.a.a.b.g.a ENSGT01000000214430.a.b.k.b.a.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00990000211532 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b.a.a.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154445.c.b ENSGT00940000160529 ENSGT00440000034932 Cow MODERN SPECIES 27 ENSBTAG00000048428 ENSBTAG00000051881 ENSBTAG00000053037 ENSBTAG00000053413 IFNB3 (ENSBTAG00000055306) IFNB3 (ENSBTAG00000049948) IFNB3 (ENSBTAG00000055103) IFNB3 (ENSBTAG00000050468) IFNB3 (ENSBTAG00000051622) IFNB3 (ENSBTAG00000048993) ENSBTAG00000046967 ENSBTAG00000048634 IF1DA6 (ENSBTAG00000054945) ENSBTAG00000052820 ENSBTAG00000053367 HACD4 (ENSBTAG00000017741) ##22 FOCAD (ENSBTAG00000038181) MLLT3 (ENSBTAG00000014124) SLC24A2 (ENSBTAG00000043972) ##24 ENSBTAG00000054622 ACER2 (ENSBTAG00000010821) RPS6 (ENSBTAG00000023462) DENND4C (ENSBTAG00000003097) PLIN2 (ENSBTAG00000005718) HAUS6 (ENSBTAG00000019843) RRAGA (ENSBTAG00000033543) SAXO1 (ENSBTAG00000001322) ADAMTSL1 (ENSBTAG00000002997) ENSBTAG00000052821 SH3GL2 (ENSBTAG00000014103) CNTLN (ENSBTAG00000001847) Hybrid Bos Indicus MODERN SPECIES 27 ENSBIXG00005025371 ENSBIXG00005025357 ENSBIXG00005025334 ENSBIXG00005025326 ENSBIXG00005025319 ENSBIXG00005025307 ENSBIXG00005025289 ENSBIXG00005025284 ENSBIXG00005025276 ENSBIXG00005005772 ENSBIXG00005025256 ENSBIXG00005025239 ENSBIXG00005025225 ENSBIXG00005025219 ENSBIXG00005025191 HACD4 (ENSBIXG00005025173) ##22 ENSBIXG00005025155 FOCAD (ENSBIXG00005025116) ENSBIXG00005025036 ENSBIXG00005025023 MLLT3 (ENSBIXG00005024977) SLC24A2 (ENSBIXG00005024850) ##24 ENSBIXG00005024768 ACER2 (ENSBIXG00005024735) RPS6 (ENSBIXG00005024714) DENND4C (ENSBIXG00005024659) PLIN2 (ENSBIXG00005024552) HAUS6 (ENSBIXG00005024512) ENSBIXG00005024481 SAXO1 (ENSBIXG00005024469) ADAMTSL1 (ENSBIXG00005024378) Eulipotyphla ANCESTRAL SPECIES 933 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 Hedgehog MODERN SPECIES 7953 HACD4 (ENSEEUG00000005380) ##22 FOCAD (ENSEEUG00000005106) Common shrew MODERN SPECIES 6248 HACD4 (ENSSARG00000007453) ##22 FOCAD (ENSSARG00000007383) Euarchontoglires ANCESTRAL SPECIES 10 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Primates ANCESTRAL SPECIES 9 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00410000028916 Strepsirrhini ANCESTRAL SPECIES 8 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Bushbaby MODERN SPECIES 121 ELAVL2 (ENSOGAG00000016228) DMRTA1 (ENSOGAG00000012178) ENSOGAG00000033113 CDKN2B (ENSOGAG00000011002) CDKN2A (ENSOGAG00000007892) MTAP (ENSOGAG00000007889) IFNE (ENSOGAG00000013610) ENSOGAG00000027191 ENSOGAG00000030880 ENSOGAG00000028717 ENSOGAG00000033309 ENSOGAG00000027157 KLHL9 (ENSOGAG00000025932) ENSOGAG00000025328 IFNB1 (ENSOGAG00000007828) HACD4 (ENSOGAG00000007825) ##22 FOCAD (ENSOGAG00000007818) ENSOGAG00000029322 ENSOGAG00000024861 SLC24A2 (ENSOGAG00000010603) ##24 ENSOGAG00000032502 ACER2 (ENSOGAG00000016257) RPS6 (ENSOGAG00000016254) ENSOGAG00000016242 ENSOGAG00000033404 ENSOGAG00000026475 PLIN2 (ENSOGAG00000006364) HAUS6 (ENSOGAG00000006361) SAXO1 (ENSOGAG00000006354) ENSOGAG00000016604 ENSOGAG00000016595 Lemuriformes ANCESTRAL SPECIES 34 ENSGT00390000010786 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 28 KIFC1 (ENSMICG00000005648) PHF1 (ENSMICG00000005660) CUTA (ENSMICG00000005673) SYNGAP1 (ENSMICG00000005678) SFTA2 (ENSMICG00000030909) ENSMICG00000035395 ENSMICG00000031166 PSMB9 (ENSMICG00000015307) TAP1 (ENSMICG00000015264) PSMB8 (ENSMICG00000015254) TAP2 (ENSMICG00000015245) HLA-DOB (ENSMICG00000034483) ENSMICG00000031829 ENSMICG00000044751 ENSMICG00000003714 ENSMICG00000028538 ##22 ENSMICG00000036984 ENSMICG00000035687 HLA-DRA (ENSMICG00000006228) ENSMICG00000037923 TREML2 (ENSMICG00000027522) ENSMICG00000041702 TREM2 (ENSMICG00000009719) TREML1 (ENSMICG00000035283) NFYA (ENSMICG00000009686) ENSMICG00000038280 APOBEC2 (ENSMICG00000043339) TSPO2 (ENSMICG00000044730) UNC5CL (ENSMICG00000009658) LRFN2 (ENSMICG00000008432) MOCS1 (ENSMICG00000009073) Mouse lemur MODERN SPECIES 1 TRPM6 (ENSMICG00000007514) C9orf40 (ENSMICG00000028036) CARNMT1 (ENSMICG00000007542) NMRK1 (ENSMICG00000007552) OSTF1 (ENSMICG00000007556) ENSMICG00000002750 PCSK5 (ENSMICG00000014046) ENSMICG00000045076 IZUMO3 (ENSMICG00000011839) ELAVL2 (ENSMICG00000001558) DMRTA1 (ENSMICG00000046386) CDKN2B (ENSMICG00000031833) CDKN2A (ENSMICG00000005835) MTAP (ENSMICG00000015072) KLHL9 (ENSMICG00000002688) ENSMICG00000014403 ##22 FOCAD (ENSMICG00000009888) MLLT3 (ENSMICG00000035047) ENSMICG00000036265 ENSMICG00000028503 SLC24A2 (ENSMICG00000034280) ##24 ACER2 (ENSMICG00000035197) ENSMICG00000007262 DENND4C (ENSMICG00000007242) PLIN2 (ENSMICG00000005214) HAUS6 (ENSMICG00000033370) RRAGA (ENSMICG00000016534) SAXO1 (ENSMICG00000047006) ADAMTSL1 (ENSMICG00000029970) SH3GL2 (ENSMICG00000009761) CNTLN (ENSMICG00000009738) Lemuriformes_a ANCESTRAL SPECIES 35 ENSGT00390000010786 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Coquerels sifaka MODERN SPECIES 1031 DMRTA1 (ENSPCOG00000021875) CDKN2B (ENSPCOG00000027261) CDKN2A (ENSPCOG00000025494) MTAP (ENSPCOG00000017099) IFNE (ENSPCOG00000015118) HACD4 (ENSPCOG00000028043) ##22 FOCAD (ENSPCOG00000017012) MLLT3 (ENSPCOG00000013614) SLC24A2 (ENSPCOG00000011721) ##24 ACER2 (ENSPCOG00000019863) ENSPCOG00000019415 DENND4C (ENSPCOG00000000944) PLIN2 (ENSPCOG00000027217) HAUS6 (ENSPCOG00000026237) RRAGA (ENSPCOG00000013740) SAXO1 (ENSPCOG00000021103) ADAMTSL1 (ENSPCOG00000018852) SH3GL2 (ENSPCOG00000027654) ENSPCOG00000028760 BNC2 (ENSPCOG00000021153) ENSPCOG00000025026 Greater bamboo lemur MODERN SPECIES 156 ENSPSMG00000005032 ENSPSMG00000005031 HACD4 (ENSPSMG00000005026) ##22 FOCAD (ENSPSMG00000004807) MLLT3 (ENSPSMG00000004470) SLC24A2 (ENSPSMG00000004439) ##24 ACER2 (ENSPSMG00000004337) ENSPSMG00000004301 DENND4C (ENSPSMG00000004221) PLIN2 (ENSPSMG00000004107) HAUS6 (ENSPSMG00000004052) RRAGA (ENSPSMG00000004027) SAXO1 (ENSPSMG00000004015) ADAMTSL1 (ENSPSMG00000003953) SH3GL2 (ENSPSMG00000003830) CNTLN (ENSPSMG00000003782) BNC2 (ENSPSMG00000003721) CCDC171 (ENSPSMG00000003682) Haplorrhini ANCESTRAL SPECIES 9 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Tarsier MODERN SPECIES 4490 ENSTSYG00000029577 HACD4 (ENSTSYG00000006852) ##22 ENSTSYG00000006797 Simiiformes ANCESTRAL SPECIES 11 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Platyrrhini ANCESTRAL SPECIES 8 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i.a ENSGT00390000008250 ENSGT00950000183031.B.e.b.c.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Cebidae ANCESTRAL SPECIES 7 ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.a.a.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i.a ENSGT00390000008250 ENSGT00950000183031.B.e.b.c.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00410000028916 Cebidae_a ANCESTRAL SPECIES 84 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.a.a.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i.a ENSGT00390000008250 ENSGT00950000183031.B.e.b.d ENSGT00950000183031.B.e.b.c.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Capuchin MODERN SPECIES 683 KLHL9 (ENSCCAG00000026796) ENSCCAG00000022267 HACD4 (ENSCCAG00000020547) ##22 FOCAD (ENSCCAG00000018687) Bolivian squirrel monkey MODERN SPECIES 69 NME7 (ENSSBOG00000034004) BLZF1 (ENSSBOG00000033672) CCDC181 (ENSSBOG00000036053) SLC19A2 (ENSSBOG00000022009) F5 (ENSSBOG00000020664) IZUMO3 (ENSSBOG00000031342) ELAVL2 (ENSSBOG00000028114) DMRTA1 (ENSSBOG00000020210) CDKN2B (ENSSBOG00000028011) CDKN2A (ENSSBOG00000030194) MTAP (ENSSBOG00000020187) ENSSBOG00000026349 KLHL9 (ENSSBOG00000030862) IFNA14 (ENSSBOG00000033464) ENSSBOG00000012028 HACD4 (ENSSBOG00000004033) ##22 FOCAD (ENSSBOG00000024709) MLLT3 (ENSSBOG00000029045) SLC24A2 (ENSSBOG00000027426) ##24 ACER2 (ENSSBOG00000032724) ENSSBOG00000018471 DENND4C (ENSSBOG00000033170) PLIN2 (ENSSBOG00000030779) HAUS6 (ENSSBOG00000026878) ENSSBOG00000031312 ENSSBOG00000008170 SAXO1 (ENSSBOG00000026964) ADAMTSL1 (ENSSBOG00000023299) ENSSBOG00000034943 SH3GL2 (ENSSBOG00000032645) CNTLN (ENSSBOG00000034763) Marmoset MODERN SPECIES ENSCJAG00000065871 ENSCJAG00000079951 DMRTA1 (ENSCJAG00000008059) ENSCJAG00000022751 ENSCJAG00000058382 CDKN2B (ENSCJAG00000008048) ENSCJAG00000051705 ENSCJAG00000008021 ENSCJAG00000060785 KLHL9 (ENSCJAG00000022401) ENSCJAG00000083249 ENSCJAG00000073023 ENSCJAG00000073103 ENSCJAG00000082610 IFNW1 (ENSCJAG00000044329) HACD4 (ENSCJAG00000008870) ##22 FOCAD (ENSCJAG00000008887) MLLT3 (ENSCJAG00000008994) ENSCJAG00000084318 SLC24A2 (ENSCJAG00000009047) ##24 ENSCJAG00000075791 ENSCJAG00000071852 ENSCJAG00000055111 ENSCJAG00000073088 ENSCJAG00000071823 ACER2 (ENSCJAG00000020617) ENSCJAG00000073393 ENSCJAG00000020612 DENND4C (ENSCJAG00000020600) ENSCJAG00000008088 ENSCJAG00000070670 Mas night monkey MODERN SPECIES 835 ENSANAG00000022457 ENSANAG00000022652 IZUMO3 (ENSANAG00000021921) ELAVL2 (ENSANAG00000032553) ENSANAG00000029023 DMRTA1 (ENSANAG00000021248) CDKN2B (ENSANAG00000018770) CDKN2A (ENSANAG00000025540) ENSANAG00000019784 MTAP (ENSANAG00000029387) IFNE (ENSANAG00000027745) KLHL9 (ENSANAG00000033732) ENSANAG00000031381 HACD4 (ENSANAG00000027847) ##22 FOCAD (ENSANAG00000029314) MLLT3 (ENSANAG00000032095) SLC24A2 (ENSANAG00000029933) ##24 ENSANAG00000025101 ACER2 (ENSANAG00000024432) DENND4C (ENSANAG00000025263) ENSANAG00000031170 ENSANAG00000034985 ENSANAG00000027699 ENSANAG00000031230 HAUS6 (ENSANAG00000026527) ENSANAG00000031746 SAXO1 (ENSANAG00000026710) ENSANAG00000021727 ADAMTSL1 (ENSANAG00000020228) Catarrhini ANCESTRAL SPECIES 13 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000153593.c.b.d.a ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Hominoidea ANCESTRAL SPECIES 23 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000153593.c.b.d.a ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Gibbon MODERN SPECIES 10 PTGR1 (ENSNLEG00000017487) DNAJC25 (ENSNLEG00000035715) ENSNLEG00000027862 CDKN2B (ENSNLEG00000035407) CDKN2A (ENSNLEG00000017493) MTAP (ENSNLEG00000017496) IFNE (ENSNLEG00000017501) ENSNLEG00000034867 IFNA8 (ENSNLEG00000030844) ENSNLEG00000033796 IFNA6 (ENSNLEG00000029201) KLHL9 (ENSNLEG00000019003) IFNA5 (ENSNLEG00000036196) IFNW1 (ENSNLEG00000018982) IFNB1 (ENSNLEG00000018983) HACD4 (ENSNLEG00000031309) ##22 FOCAD (ENSNLEG00000017507) MLLT3 (ENSNLEG00000017518) ENSNLEG00000031226 SLC24A2 (ENSNLEG00000017526) ##24 ENSNLEG00000033918 ENSNLEG00000029682 ACER2 (ENSNLEG00000017530) ENSNLEG00000017532 DENND4C (ENSNLEG00000017539) ENSNLEG00000031450 ENSNLEG00000027546 PLIN2 (ENSNLEG00000017545) HAUS6 (ENSNLEG00000017550) RRAGA (ENSNLEG00000018985) ENSNLEG00000035167 Hominidae ANCESTRAL SPECIES 10 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00390000009819.a.b.b.r.a ENSGT00390000009819.a.a ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b ENSGT00730000110920.b.a.b.bb ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00390000009819.a.b.b.r.a ENSGT00390000009819.a.a ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c Homo/Pan group ANCESTRAL SPECIES 27 ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.b ENSGT01000000214430.a.a.a.a.a.b.a.a.c ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.d.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.d.b ENSGT01000000214430.a.a.a.a.a.b.a.a.d.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b ENSGT00730000110920.b.a.b.bb ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Pan ANCESTRAL SPECIES 26 ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.b ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.d.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b ENSGT00730000110920.b.a.b.bb ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00390000009819.a.b.b.r.a ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 Chimpanzee MODERN SPECIES 22 CDKN2A (ENSPTRG00000020827) MTAP (ENSPTRG00000020825) IFNE (ENSPTRG00000020823) ENSPTRG00000043432 IFNA8 (ENSPTRG00000045477) IFNA2 (ENSPTRG00000020820) ENSPTRG00000050673 IFNA6 (ENSPTRG00000041238) KLHL9 (ENSPTRG00000022846) IFNA5 (ENSPTRG00000048038) IFNA14 (ENSPTRG00000044822) IFNA17 (ENSPTRG00000045595) IFNA21 (ENSPTRG00000048249) IFNW1 (ENSPTRG00000048978) IFNB1 (ENSPTRG00000020811) HACD4 (ENSPTRG00000052281) ##22 FOCAD (ENSPTRG00000020809) MLLT3 (ENSPTRG00000020808) SLC24A2 (ENSPTRG00000020806) ##24 ENSPTRG00000047361 ENSPTRG00000052125 ACER2 (ENSPTRG00000020804) RPS6 (ENSPTRG00000039153) DENND4C (ENSPTRG00000020802) ENSPTRG00000050726 PLIN2 (ENSPTRG00000020801) HAUS6 (ENSPTRG00000020800) RRAGA (ENSPTRG00000020798) ENSPTRG00000051867 SAXO1 (ENSPTRG00000020796) ENSPTRG00000050598 Bonobo MODERN SPECIES 22 MTAP (ENSPPAG00000038109) IFNE (ENSPPAG00000011111) ENSPPAG00000031511 IFNA8 (ENSPPAG00000011307) IFNA2 (ENSPPAG00000021138) ENSPPAG00000008684 IFNA6 (ENSPPAG00000008243) KLHL9 (ENSPPAG00000039116) IFNA5 (ENSPPAG00000009372) IFNA14 (ENSPPAG00000006950) IFNA17 (ENSPPAG00000005706) IFNA7 (ENSPPAG00000033124) IFNA10 (ENSPPAG00000009659) IFNA21 (ENSPPAG00000033360) IFNW1 (ENSPPAG00000024810) HACD4 (ENSPPAG00000038675) ##22 FOCAD (ENSPPAG00000033033) MLLT3 (ENSPPAG00000026839) SLC24A2 (ENSPPAG00000013510) ##24 ENSPPAG00000005138 ENSPPAG00000034594 ACER2 (ENSPPAG00000036613) RPS6 (ENSPPAG00000037670) DENND4C (ENSPPAG00000034704) ENSPPAG00000027144 PLIN2 (ENSPPAG00000010479) HAUS6 (ENSPPAG00000036089) RRAGA (ENSPPAG00000012463) ENSPPAG00000036876 SAXO1 (ENSPPAG00000031728) ENSPPAG00000024728 Human MODERN SPECIES 21 IFNA8 (ENSG00000120242) IFNA2 (ENSG00000188379) IFNA13 (ENSG00000233816) IFNA6 (ENSG00000120235) KLHL9 (ENSG00000198642) IFNA5 (ENSG00000147873) IFNA14 (ENSG00000228083) IFNA17 (ENSG00000234829) IFNA16 (ENSG00000147885) IFNA10 (ENSG00000186803) IFNA7 (ENSG00000214042) IFNA4 (ENSG00000236637) IFNA21 (ENSG00000137080) IFNW1 (ENSG00000177047) IFNB1 (ENSG00000171855) HACD4 (ENSG00000188921) ##22 FOCAD (ENSG00000188352) MLLT3 (ENSG00000171843) SLC24A2 (ENSG00000155886) ##24 ACER2 (ENSG00000177076) RPS6 (ENSG00000137154) DENND4C (ENSG00000137145) PLIN2 (ENSG00000147872) HAUS6 (ENSG00000147874) RRAGA (ENSG00000155876) SAXO1 (ENSG00000155875) ADAMTSL1 (ENSG00000178031) SH3GL2 (ENSG00000107295) CNTLN (ENSG00000044459) BNC2 (ENSG00000173068) CCDC171 (ENSG00000164989) Gorilla MODERN SPECIES 22 CAAP1 (ENSGGOG00000015329) TUSC1 (ENSGGOG00000004137) IZUMO3 (ENSGGOG00000011508) ELAVL2 (ENSGGOG00000003678) DMRTA1 (ENSGGOG00000009094) CDKN2B (ENSGGOG00000042843) CDKN2A (ENSGGOG00000024454) MTAP (ENSGGOG00000012929) IFNE (ENSGGOG00000015760) IFNA13 (ENSGGOG00000036801) IFNA2 (ENSGGOG00000026395) IFNA1 (ENSGGOG00000038600) KLHL9 (ENSGGOG00000023406) IFNW1 (ENSGGOG00000012076) IFNB1 (ENSGGOG00000025576) HACD4 (ENSGGOG00000016141) ##22 FOCAD (ENSGGOG00000008191) MLLT3 (ENSGGOG00000004505) SLC24A2 (ENSGGOG00000016544) ##24 ENSGGOG00000040005 ACER2 (ENSGGOG00000003851) RPS6 (ENSGGOG00000002652) DENND4C (ENSGGOG00000023295) ENSGGOG00000039679 PLIN2 (ENSGGOG00000016485) HAUS6 (ENSGGOG00000027530) RRAGA (ENSGGOG00000021937) SAXO1 (ENSGGOG00000024981) ENSGGOG00000037773 ADAMTSL1 (ENSGGOG00000010914) ENSGGOG00000040154 Orangutan MODERN SPECIES 22 ENSPPYG00000035735 IFNA8 (ENSPPYG00000033446) ENSPPYG00000035412 IFNA6 (ENSPPYG00000033933) IFNA5 (ENSPPYG00000032823) IFNA14 (ENSPPYG00000032470) ENSPPYG00000030191 ENSPPYG00000040684 ENSPPYG00000035433 IFNA16 (ENSPPYG00000031165) ENSPPYG00000030952 ENSPPYG00000041505 IFNA21 (ENSPPYG00000035236) IFNW1 (ENSPPYG00000019184) IFNB1 (ENSPPYG00000019185) HACD4 (ENSPPYG00000019186) ##22 FOCAD (ENSPPYG00000019187) MLLT3 (ENSPPYG00000019188) SLC24A2 (ENSPPYG00000019190) ##24 ACER2 (ENSPPYG00000019192) ENSPPYG00000019193 DENND4C (ENSPPYG00000019194) PLIN2 (ENSPPYG00000019195) ENSPPYG00000033603 HAUS6 (ENSPPYG00000036018) RRAGA (ENSPPYG00000019196) SAXO1 (ENSPPYG00000019197) ADAMTSL1 (ENSPPYG00000019199) SH3GL2 (ENSPPYG00000040517) CNTLN (ENSPPYG00000019201) BNC2 (ENSPPYG00000019203) Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000153593.c.b.d.a ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b.b.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j.n ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Rhinopithecus ANCESTRAL SPECIES 774 ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 Black snub-nosed monkey MODERN SPECIES 829 IFNB1 (ENSRBIG00000020848) HACD4 (ENSRBIG00000009212) ##22 FOCAD (ENSRBIG00000027028) MLLT3 (ENSRBIG00000043980) Golden snub-nosed monkey MODERN SPECIES 1749 ENSRROG00000033079 IFNB1 (ENSRROG00000002715) HACD4 (ENSRROG00000035716) ##22 Cercopithecinae ANCESTRAL SPECIES 12 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00390000017443.s.b ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b.b.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00390000017443.s.b ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b.b.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c Macaca ANCESTRAL SPECIES 10 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00390000017443.s.b ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a.j.n ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Pig-tailed macaque MODERN SPECIES 350 ENSMNEG00000030913 IFNB1 (ENSMNEG00000037943) HACD4 (ENSMNEG00000030794) ##22 FOCAD (ENSMNEG00000038816) MLLT3 (ENSMNEG00000038758) Macaca_a ANCESTRAL SPECIES 10 ENSGT00940000160640 ENSGT00940000162423 ENSGT00950000182991.B.yb.a ENSGT00940000156051.mc.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b.a ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT01100000263509.a.a.a.c.b.a ENSGT00390000004438 ENSGT00390000017443.s.b ENSGT00940000155903 ENSGT00940000163505.a.a.a.b.a.b.b.a.a.b.b.a.b.a.b.a.b.a.b.a.b.a.b.a.b.a ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j.n ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Crab-eating macaque MODERN SPECIES 6 ENSMFAG00000048577 ENSMFAG00000057421 ENSMFAG00000047167 IFNA8 (ENSMFAG00000053442) ENSMFAG00000052004 ENSMFAG00000049642 IFNA6 (ENSMFAG00000017071) KLHL9 (ENSMFAG00000061614) IFNA14 (ENSMFAG00000048461) ENSMFAG00000061198 ENSMFAG00000063486 ENSMFAG00000050022 ENSMFAG00000055488 IFNW1 (ENSMFAG00000048122) IFNB1 (ENSMFAG00000029241) HACD4 (ENSMFAG00000059691) ##22 ENSMFAG00000048615 FOCAD (ENSMFAG00000040075) ENSMFAG00000049166 MLLT3 (ENSMFAG00000036142) ENSMFAG00000049513 ENSMFAG00000051544 SLC24A2 (ENSMFAG00000031682) ##24 ENSMFAG00000061978 ENSMFAG00000051448 ACER2 (ENSMFAG00000003867) RPS6 (ENSMFAG00000044377) DENND4C (ENSMFAG00000030981) PLIN2 (ENSMFAG00000041970) HAUS6 (ENSMFAG00000000635) RRAGA (ENSMFAG00000030433) Rhesus MODERN SPECIES 6 CDKN2B (ENSMMUG00000001134) MTAP (ENSMMUG00000001137) ENSMMUG00000063104 IFNA13 (ENSMMUG00000051298) IFNA8 (ENSMMUG00000063809) ENSMMUG00000055493 IFNA6 (ENSMMUG00000054514) KLHL9 (ENSMMUG00000010959) IFNA14 (ENSMMUG00000058900) ENSMMUG00000052729 IFNA10 (ENSMMUG00000058565) ENSMMUG00000058435 IFNW1 (ENSMMUG00000058193) IFNB1 (ENSMMUG00000019067) FOCAD (ENSMMUG00000019070) HACD4 (ENSMMUG00000019068) ##22 ENSMMUG00000061078 ENSMMUG00000006895 MLLT3 (ENSMMUG00000008325) ENSMMUG00000052698 SLC24A2 (ENSMMUG00000020651) ##24 ACER2 (ENSMMUG00000045740) ENSMMUG00000003412 DENND4C (ENSMMUG00000004338) ENSMMUG00000060611 ENSMMUG00000058409 PLIN2 (ENSMMUG00000013997) HAUS6 (ENSMMUG00000018396) RRAGA (ENSMMUG00000018395) SAXO1 (ENSMMUG00000018394) ADAMTSL1 (ENSMMUG00000044658) Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00940000160640 ENSGT00940000153593.c.b.d.a ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j.n ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.j.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Olive baboon MODERN SPECIES 4 DMRTA1 (ENSPANG00000029682) ENSPANG00000045037 ENSPANG00000048816 ENSPANG00000030138 MTAP (ENSPANG00000025242) ENSPANG00000045683 ENSPANG00000050899 IFNA8 (ENSPANG00000042591) IFNA6 (ENSPANG00000048129) ENSPANG00000045049 KLHL9 (ENSPANG00000025244) IFNA14 (ENSPANG00000041833) ENSPANG00000032030 IFNW1 (ENSPANG00000046967) IFNB1 (ENSPANG00000000084) HACD4 (ENSPANG00000025246) ##22 ENSPANG00000037458 FOCAD (ENSPANG00000025247) MLLT3 (ENSPANG00000025248) ENSPANG00000041722 ENSPANG00000048894 ENSPANG00000038349 ENSPANG00000025250 ##24 ENSPANG00000049665 HAUS6 (ENSPANG00000025239) RRAGA (ENSPANG00000000085) SAXO1 (ENSPANG00000025238) ENSPANG00000044854 ENSPANG00000031035 ENSPANG00000038651 ADAMTSL1 (ENSPANG00000025231) Cercopithecinae_d ANCESTRAL SPECIES 34 ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j.n ENSGT00940000158215 ENSGT01100000263525.a.a.z ENSGT00950000182920.b.a.b.a.b.i.d ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Drill MODERN SPECIES 150 HACD4 (ENSMLEG00000026224) ##22 FOCAD (ENSMLEG00000040934) Sooty mangabey MODERN SPECIES 629 ENSCATG00000038575 IFNB1 (ENSCATG00000019373) HACD4 (ENSCATG00000005629) ##22 FOCAD (ENSCATG00000042057) MLLT3 (ENSCATG00000003737) SLC24A2 (ENSCATG00000042548) ##24 ENSCATG00000016042 ENSCATG00000021155 ACER2 (ENSCATG00000038816) RPS6 (ENSCATG00000034999) DENND4C (ENSCATG00000032598) ENSCATG00000041930 ENSCATG00000040337 HAUS6 (ENSCATG00000009800) RRAGA (ENSCATG00000015913) SAXO1 (ENSCATG00000034966) ENSCATG00000030026 ADAMTSL1 (ENSCATG00000042482) Vervet Monkey MODERN SPECIES 3 CDKN2B (ENSCSAG00000009704) ENSCSAG00000009696 MTAP (ENSCSAG00000009686) IFNE (ENSCSAG00000009680) ENSCSAG00000000440 IFNA8 (ENSCSAG00000009673) IFNA2 (ENSCSAG00000009666) ENSCSAG00000000439 IFNA6 (ENSCSAG00000000438) IFNA14 (ENSCSAG00000000437) ENSCSAG00000000436 ENSCSAG00000000435 ENSCSAG00000000434 IFNW1 (ENSCSAG00000000433) IFNB1 (ENSCSAG00000000432) HACD4 (ENSCSAG00000009661) ##22 FOCAD (ENSCSAG00000009599) ENSCSAG00000018481 MLLT3 (ENSCSAG00000009472) SLC24A2 (ENSCSAG00000009459) ##24 ACER2 (ENSCSAG00000009413) ENSCSAG00000009408 DENND4C (ENSCSAG00000009390) PLIN2 (ENSCSAG00000009362) HAUS6 (ENSCSAG00000009348) SAXO1 (ENSCSAG00000009331) ADAMTSL1 (ENSCSAG00000009320) ENSCSAG00000018483 SH3GL2 (ENSCSAG00000009307) CNTLN (ENSCSAG00000009297) BNC2 (ENSCSAG00000009282) Euarchontoglires_A ANCESTRAL SPECIES 10 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Glires ANCESTRAL SPECIES 9 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Rodentia ANCESTRAL SPECIES 9 ENSGT00550000074944 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Rodentia_B ANCESTRAL SPECIES 6 ENSGT00550000074944 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Myomorpha ANCESTRAL SPECIES 1 ENSGT00550000074944 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Muroidea ANCESTRAL SPECIES 1 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.o ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.o ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Cricetidae ANCESTRAL SPECIES 2 ENSGT00390000007109 ENSGT00550000074944 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.o ENSGT00940000154359.e ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00390000010786 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.o ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Northern American deer mouse MODERN SPECIES 11 ENSPEMG00000007998 Ifne (ENSPEMG00000029831) ENSPEMG00000026834 ENSPEMG00000024899 ENSPEMG00000027847 ENSPEMG00000027437 ENSPEMG00000030301 Klhl9 (ENSPEMG00000013714) ENSPEMG00000024802 ENSPEMG00000030502 ENSPEMG00000025225 ENSPEMG00000030406 ENSPEMG00000026355 ENSPEMG00000029651 Ifnb1 (ENSPEMG00000025091) Hacd4 (ENSPEMG00000016283) ##22 ENSPEMG00000013210 Focad (ENSPEMG00000000124) ENSPEMG00000008739 ENSPEMG00000029974 Slc24a2 (ENSPEMG00000019954) ##24 Acer2 (ENSPEMG00000020047) ENSPEMG00000020062 Dennd4c (ENSPEMG00000020187) Plin2 (ENSPEMG00000020242) Haus6 (ENSPEMG00000028376) Rraga (ENSPEMG00000012776) Saxo1 (ENSPEMG00000000040) Adamtsl1 (ENSPEMG00000005320) Sh3gl2 (ENSPEMG00000010691) ENSPEMG00000012875 Prairie vole MODERN SPECIES 1 ENSMOCG00000004079 Dmrta1 (ENSMOCG00000002337) Cdkn2b (ENSMOCG00000015669) ENSMOCG00000013892 Mtap (ENSMOCG00000012400) ENSMOCG00000003644 ENSMOCG00000004406 ENSMOCG00000003427 ENSMOCG00000004176 Klhl9 (ENSMOCG00000003966) ENSMOCG00000022936 ENSMOCG00000002912 ENSMOCG00000003333 ENSMOCG00000003596 ENSMOCG00000007135 Hacd4 (ENSMOCG00000009794) ##22 Focad (ENSMOCG00000016725) Mllt3 (ENSMOCG00000011295) Slc24a2 (ENSMOCG00000021376) ##24 Acer2 (ENSMOCG00000006649) Rps6 (ENSMOCG00000004590) Dennd4c (ENSMOCG00000001944) ENSMOCG00000014772 ENSMOCG00000023023 Saxo1 (ENSMOCG00000016102) Adamtsl1 (ENSMOCG00000000817) Sh3gl2 (ENSMOCG00000022289) Cntln (ENSMOCG00000019830) ENSMOCG00000008451 Bnc2 (ENSMOCG00000015132) Ccdc171 (ENSMOCG00000016262) Cricetinae ANCESTRAL SPECIES 21 ENSGT01000000214430.a.a.a.a.a.b.o.f.a ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.o.e ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.b.r.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00940000169234 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Chinese hamster chok1gshd MODERN SPECIES 111 ENSCGRG00001006253 ENSCGRG00001009477 ENSCGRG00001009627 ENSCGRG00001005704 ENSCGRG00001006765 ENSCGRG00001006905 ENSCGRG00001007554 ENSCGRG00001015592 ENSCGRG00001019024 ENSCGRG00001002533 ENSCGRG00001003121 ENSCGRG00001002928 ENSCGRG00001003697 ENSCGRG00001001577 Ifnb1 (ENSCGRG00001002042) Hacd4 (ENSCGRG00001014653) ##22 Focad (ENSCGRG00001019342) Mllt3 (ENSCGRG00001021349) ENSCGRG00001017031 ENSCGRG00001002729 Slc24a2 (ENSCGRG00001020424) ##24 Acer2 (ENSCGRG00001023025) ENSCGRG00001022215 ENSCGRG00001022609 Dennd4c (ENSCGRG00001004609) Plin2 (ENSCGRG00001016267) Saxo1 (ENSCGRG00001017278) Adamtsl1 (ENSCGRG00001004761) Sh3gl2 (ENSCGRG00001022450) Cntln (ENSCGRG00001005303) ENSCGRG00001006130 Golden Hamster MODERN SPECIES 662 Mysm1 (ENSMAUG00000014841) Eqtn (ENSMAUG00000015891) Tek (ENSMAUG00000018555) ENSMAUG00000006577 Ift74 (ENSMAUG00000001215) Plaa (ENSMAUG00000013719) ENSMAUG00000014308 Tusc1 (ENSMAUG00000020941) Izumo3 (ENSMAUG00000014991) Elavl2 (ENSMAUG00000011955) Dmrta1 (ENSMAUG00000004332) Cdkn2b (ENSMAUG00000019635) Cdkn2a (ENSMAUG00000003307) Mtap (ENSMAUG00000010309) ENSMAUG00000004733 Hacd4 (ENSMAUG00000000488) ##22 Focad (ENSMAUG00000012306) Mllt3 (ENSMAUG00000021318) Slc24a2 (ENSMAUG00000016398) ##24 Acer2 (ENSMAUG00000020667) ENSMAUG00000016545 Dennd4c (ENSMAUG00000002052) ENSMAUG00000020314 Rraga (ENSMAUG00000003702) Saxo1 (ENSMAUG00000004358) Adamtsl1 (ENSMAUG00000018361) Murinae ANCESTRAL SPECIES 2 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.p.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Mus ANCESTRAL SPECIES 3 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000168083 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Mus_A ANCESTRAL SPECIES 3 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000168083 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00860000135766 ENSGT01000000214430.a.a.a.a.a.b.p.a.a.b.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Ryukyu mouse MODERN SPECIES 13 Mtap (MGP_CAROLIEiJ_G0026155) Ifne (MGP_CAROLIEiJ_G0026154) MGP_CAROLIEiJ_G0026153 MGP_CAROLIEiJ_G0026152 MGP_CAROLIEiJ_G0026151 Klhl9 (MGP_CAROLIEiJ_G0026150) MGP_CAROLIEiJ_G0026149 MGP_CAROLIEiJ_G0026148 MGP_CAROLIEiJ_G0026147 MGP_CAROLIEiJ_G0026146 Pramel32 (MGP_CAROLIEiJ_G0026145) MGP_CAROLIEiJ_G0026144 MGP_CAROLIEiJ_G0026143 Ifna12 (MGP_CAROLIEiJ_G0026142) Ifnb1 (MGP_CAROLIEiJ_G0026141) Hacd4 (MGP_CAROLIEiJ_G0026140) ##22 Focad (MGP_CAROLIEiJ_G0026139) Mllt3 (MGP_CAROLIEiJ_G0026138) Slc24a2 (MGP_CAROLIEiJ_G0026137) ##24 Acer2 (MGP_CAROLIEiJ_G0026136) MGP_CAROLIEiJ_G0026135 Dennd4c (MGP_CAROLIEiJ_G0026134) Plin2 (MGP_CAROLIEiJ_G0026133) MGP_CAROLIEiJ_G0026132 Rraga (MGP_CAROLIEiJ_G0026131) Saxo1 (MGP_CAROLIEiJ_G0026130) Adamtsl1 (MGP_CAROLIEiJ_G0026129) Sh3gl2 (MGP_CAROLIEiJ_G0026128) Cntln (MGP_CAROLIEiJ_G0026127) Bnc2 (MGP_CAROLIEiJ_G0026126) Ccdc171 (MGP_CAROLIEiJ_G0026125) Mus_B ANCESTRAL SPECIES 5 ENSGT00940000156823.e ENSGT00940000164376.c ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000168083 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00860000135766 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.b.p.a.b.a ENSGT01000000214430.a.a.a.a.a.b.p.a.a.b.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Mouse MODERN SPECIES 13 Gm13289 (ENSMUSG00000096582) Gm13290 (ENSMUSG00000094271) Gm13283 (ENSMUSG00000100505) Gm13271 (ENSMUSG00000094618) Klhl9 (ENSMUSG00000070923) Ifnab (ENSMUSG00000100079) Ifna2 (ENSMUSG00000078354) Ifna16 (ENSMUSG00000078355) Ifna13 (ENSMUSG00000063376) Pramel32 (ENSMUSG00000038330) Ifna12 (ENSMUSG00000073811) Ifna9 (ENSMUSG00000095270) Ifna14 (ENSMUSG00000095896) Ifna15 (ENSMUSG00000096011) Ifnb1 (ENSMUSG00000048806) Hacd4 (ENSMUSG00000028497) ##22 Focad (ENSMUSG00000038368) Mllt3 (ENSMUSG00000028496) Slc24a2 (ENSMUSG00000037996) ##24 Acer2 (ENSMUSG00000038007) Rps6 (ENSMUSG00000028495) Dennd4c (ENSMUSG00000038024) Plin2 (ENSMUSG00000028494) Haus6 (ENSMUSG00000038047) Rraga (ENSMUSG00000070934) Saxo1 (ENSMUSG00000028492) Adamtsl1 (ENSMUSG00000066113) Sh3gl2 (ENSMUSG00000028488) Cntln (ENSMUSG00000038070) Bnc2 (ENSMUSG00000028487) Ccdc171 (ENSMUSG00000052407) Mus_C ANCESTRAL SPECIES 2 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000164376.c ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000168083 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00860000135766 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.b.p.a.b.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 spretus MODERN SPECIES 13 Cdkn2a (MGP_SPRETEiJ_G0027120) Mtap (MGP_SPRETEiJ_G0027119) Ifne (MGP_SPRETEiJ_G0027118) MGP_SPRETEiJ_G0027117 MGP_SPRETEiJ_G0027116 MGP_SPRETEiJ_G0027115 MGP_SPRETEiJ_G0027114 Klhl9 (MGP_SPRETEiJ_G0027113) MGP_SPRETEiJ_G0027112 MGP_SPRETEiJ_G0027111 MGP_SPRETEiJ_G0027110 MGP_SPRETEiJ_G0027109 Pramel32 (MGP_SPRETEiJ_G0027108) MGP_SPRETEiJ_G0027107 Ifnb1 (MGP_SPRETEiJ_G0027106) Hacd4 (MGP_SPRETEiJ_G0027105) ##22 Focad (MGP_SPRETEiJ_G0027104) Mllt3 (MGP_SPRETEiJ_G0027103) Slc24a2 (MGP_SPRETEiJ_G0027102) ##24 Acer2 (MGP_SPRETEiJ_G0027101) Rps6 (MGP_SPRETEiJ_G0027100) Dennd4c (MGP_SPRETEiJ_G0027099) Plin2 (MGP_SPRETEiJ_G0027098) Haus6 (MGP_SPRETEiJ_G0027097) Rraga (MGP_SPRETEiJ_G0027096) Saxo1 (MGP_SPRETEiJ_G0027095) Adamtsl1 (MGP_SPRETEiJ_G0027094) MGP_SPRETEiJ_G0027093 Cntln (MGP_SPRETEiJ_G0027092) Bnc2 (MGP_SPRETEiJ_G0027091) Ccdc171 (MGP_SPRETEiJ_G0027090) Steppe mouse MODERN SPECIES 2820 Ifnb1 (ENSMSIG00000021867) Hacd4 (ENSMSIG00000021876) ##22 Focad (ENSMSIG00000021916) Mllt3 (ENSMSIG00000022183) Shrew mouse MODERN SPECIES 19 Cdkn2a (MGP_PahariEiJ_G0028493) Mtap (MGP_PahariEiJ_G0028492) Ifne (MGP_PahariEiJ_G0028491) MGP_PahariEiJ_G0028490 MGP_PahariEiJ_G0028488 MGP_PahariEiJ_G0028489 MGP_PahariEiJ_G0028487 MGP_PahariEiJ_G0028486 Klhl9 (MGP_PahariEiJ_G0028485) MGP_PahariEiJ_G0028483 MGP_PahariEiJ_G0028484 MGP_PahariEiJ_G0028482 MGP_PahariEiJ_G0028481 MGP_PahariEiJ_G0028480 Ifnb1 (MGP_PahariEiJ_G0028479) MGP_PahariEiJ_G0028478 ##22 Focad (MGP_PahariEiJ_G0028477) Mllt3 (MGP_PahariEiJ_G0028476) Slc24a2 (MGP_PahariEiJ_G0028475) ##24 Acer2 (MGP_PahariEiJ_G0028474) MGP_PahariEiJ_G0028473 Dennd4c (MGP_PahariEiJ_G0028472) Plin2 (MGP_PahariEiJ_G0028471) Haus6 (MGP_PahariEiJ_G0028470) Rraga (MGP_PahariEiJ_G0028469) Saxo1 (MGP_PahariEiJ_G0028468) Adamtsl1 (MGP_PahariEiJ_G0028467) MGP_PahariEiJ_G0028466 Cntln (MGP_PahariEiJ_G0028465) Bnc2 (MGP_PahariEiJ_G0028464) Ccdc171 (MGP_PahariEiJ_G0028463) Rat MODERN SPECIES 15 LOC100362345 (ENSRNOG00000024197) Ifne (ENSRNOG00000024204) LOC100911527 (ENSRNOG00000065328) LOC120103164 (ENSRNOG00000070321) LOC120103163 (ENSRNOG00000066857) RGD1560539 (ENSRNOG00000066962) LOC120103162 (ENSRNOG00000065583) LOC120103161 (ENSRNOG00000063625) LOC120103160 (ENSRNOG00000063583) LOC120103159 (ENSRNOG00000069770) LOC120103158 (ENSRNOG00000064351) ENSRNOG00000065554 Ifna1 (ENSRNOG00000068703) Ifna4 (ENSRNOG00000063201) Ifnb1 (ENSRNOG00000006268) Hacd4 (ENSRNOG00000005772) ##22 Focad (ENSRNOG00000024402) Mllt3 (ENSRNOG00000011280) Slc24a2 (ENSRNOG00000008169) ##24 Acer2 (ENSRNOG00000007637) Rps6 (ENSRNOG00000007663) Dennd4c (ENSRNOG00000008036) Plin2 (ENSRNOG00000007060) Haus6 (ENSRNOG00000046028) Rraga (ENSRNOG00000007051) Saxo1 (ENSRNOG00000048197) Adamtsl1 (ENSRNOG00000006956) Sh3gl2 (ENSRNOG00000006761) Cntln (ENSRNOG00000043151) Bnc2 (ENSRNOG00000006553) LOC120102904 (ENSRNOG00000067108) Upper Galilee mountains blind mole rat MODERN SPECIES 1299 Ifnb1 (ENSNGAG00000018797) Hacd4 (ENSNGAG00000022599) ##22 Focad (ENSNGAG00000014774) Mllt3 (ENSNGAG00000011123) ENSNGAG00000006130 Slc24a2 (ENSNGAG00000014040) ##24 ENSNGAG00000022308 Acer2 (ENSNGAG00000017022) Rps6 (ENSNGAG00000018864) Dennd4c (ENSNGAG00000013102) Plin2 (ENSNGAG00000013288) Haus6 (ENSNGAG00000019193) Rraga (ENSNGAG00000007602) Saxo1 (ENSNGAG00000022334) ENSNGAG00000022954 ENSNGAG00000019233 Lesser Egyptian jerboa MODERN SPECIES 66 Plaa (ENSJJAG00000013453) Caap1 (ENSJJAG00000012208) ENSJJAG00000019508 ENSJJAG00000011332 Izumo3 (ENSJJAG00000017341) Elavl2 (ENSJJAG00000008247) ENSJJAG00000021773 Dmrta1 (ENSJJAG00000015837) ENSJJAG00000009725 ENSJJAG00000009128 Cdkn2b (ENSJJAG00000021247) ENSJJAG00000017320 ENSJJAG00000010173 Klhl9 (ENSJJAG00000007691) ENSJJAG00000024178 Hacd4 (ENSJJAG00000024303) ##22 Focad (ENSJJAG00000024309) Mllt3 (ENSJJAG00000012196) ENSJJAG00000018542 Slc24a2 (ENSJJAG00000020852) ##24 Acer2 (ENSJJAG00000020889) ENSJJAG00000011871 Dennd4c (ENSJJAG00000022774) Plin2 (ENSJJAG00000014665) Haus6 (ENSJJAG00000020343) Rraga (ENSJJAG00000008212) ENSJJAG00000015289 ENSJJAG00000016096 ENSJJAG00000014571 ENSJJAG00000010272 ENSJJAG00000024102 Kangaroo rat MODERN SPECIES 372 ENSDORG00000010654 Tek (ENSDORG00000010652) Lrrc19 (ENSDORG00000008965) Ift74 (ENSDORG00000008963) Plaa (ENSDORG00000002789) Caap1 (ENSDORG00000025530) Tusc1 (ENSDORG00000029686) ENSDORG00000005292 Izumo3 (ENSDORG00000027519) Elavl2 (ENSDORG00000010437) Dmrta1 (ENSDORG00000015411) Cdkn2b (ENSDORG00000012076) ENSDORG00000012075 Mtap (ENSDORG00000012074) Klhl9 (ENSDORG00000028408) Hacd4 (ENSDORG00000006925) ##22 Focad (ENSDORG00000006921) ENSDORG00000028514 ENSDORG00000027266 Slc24a2 (ENSDORG00000015412) ##24 Acer2 (ENSDORG00000002403) ENSDORG00000012057 Dennd4c (ENSDORG00000012055) ENSDORG00000014197 Haus6 (ENSDORG00000026577) Saxo1 (ENSDORG00000026559) ENSDORG00000025399 ENSDORG00000024977 ENSDORG00000027313 Sh3gl2 (ENSDORG00000000622) ENSDORG00000028767 Rodentia_A ANCESTRAL SPECIES 11 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000167452 ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Hystricomorpha ANCESTRAL SPECIES 46 ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243.jb ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Naked mole-rat female MODERN SPECIES 3 ENSHGLG00000004959 ENSHGLG00000037708 ENSHGLG00000006210 ENSHGLG00000044890 ENSHGLG00000007302 ENSHGLG00000003036 ENSHGLG00000005687 ENSHGLG00000019003 ENSHGLG00000006265 ENSHGLG00000018870 ENSHGLG00000006983 ENSHGLG00000020691 ENSHGLG00000020519 ENSHGLG00000040693 ENSHGLG00000009375 PTPLAD2 (ENSHGLG00000015090) ##22 FOCAD (ENSHGLG00000010449) ENSHGLG00000017554 ENSHGLG00000042372 ENSHGLG00000039414 MLLT3 (ENSHGLG00000010560) ENSHGLG00000035978 SLC24A2 (ENSHGLG00000013244) ##24 ENSHGLG00000007103 ACER2 (ENSHGLG00000042194) RPS6 (ENSHGLG00000048620) DENND4C (ENSHGLG00000007572) PLIN2 (ENSHGLG00000049693) HAUS6 (ENSHGLG00000015943) RRAGA (ENSHGLG00000037556) SAXO1 (ENSHGLG00000011651) Hystricomorpha_a ANCESTRAL SPECIES 53 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243.jb ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Guinea pig MODERN SPECIES 21 ENSCPOG00000032595 ENSCPOG00000009732 ENSCPOG00000026970 ENSCPOG00000008049 HACD4 (ENSCPOG00000013883) ##22 FOCAD (ENSCPOG00000013874) ENSCPOG00000026839 SLC24A2 (ENSCPOG00000010006) ##24 ACER2 (ENSCPOG00000003256) ENSCPOG00000003750 DENND4C (ENSCPOG00000003743) ENSCPOG00000011958 ENSCPOG00000025832 HAUS6 (ENSCPOG00000008053) RRAGA (ENSCPOG00000008047) ENSCPOG00000031962 ADAMTSL1 (ENSCPOG00000003783) SH3GL2 (ENSCPOG00000015380) ENSCPOG00000032617 BNC2 (ENSCPOG00000006163) Hystricomorpha_b ANCESTRAL SPECIES 71 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243.jb ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Long-tailed chinchilla MODERN SPECIES 141 ENSCLAG00000011967 HACD4 (ENSCLAG00000008037) ##22 ENSCLAG00000007141 FOCAD (ENSCLAG00000012468) ENSCLAG00000011270 SLC24A2 (ENSCLAG00000008199) ##24 ACER2 (ENSCLAG00000010907) ENSCLAG00000009131 DENND4C (ENSCLAG00000007655) PLIN2 (ENSCLAG00000006627) HAUS6 (ENSCLAG00000015951) RRAGA (ENSCLAG00000017884) SAXO1 (ENSCLAG00000015777) ADAMTSL1 (ENSCLAG00000016263) SH3GL2 (ENSCLAG00000012375) ENSCLAG00000010823 BNC2 (ENSCLAG00000009846) Degu MODERN SPECIES 85 ENSODEG00000020288 HACD4 (ENSODEG00000014342) ##22 ENSODEG00000020253 FOCAD (ENSODEG00000015002) ENSODEG00000014558 MLLT3 (ENSODEG00000016615) ENSODEG00000015587 SLC24A2 (ENSODEG00000016346) ##24 ACER2 (ENSODEG00000014450) ENSODEG00000014595 ENSODEG00000020327 DENND4C (ENSODEG00000014636) PLIN2 (ENSODEG00000014348) HAUS6 (ENSODEG00000014005) ENSODEG00000020152 RRAGA (ENSODEG00000020270) ENSODEG00000020135 Sciuridae ANCESTRAL SPECIES 6 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078.g ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Marmotini ANCESTRAL SPECIES 1 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000163078.g ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.n.b.a.b ENSGT01000000214430.a.b.f.a.a ENSGT01000000214430.a.a.a.a.a.b.n.b.a.a ENSGT01000000214430.a.a.a.a.a.b.m.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.n.a.a ENSGT01000000214430.a.a.a.a.a.b.n.b.b ENSGT01000000214430.a.b.f.a.b ENSGT01000000214430.a.a.a.a.a.b.m.a ENSGT01000000214430.a.b.e ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Marmotini_b ANCESTRAL SPECIES 118 ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.n.a.a ENSGT01000000214430.a.a.a.a.a.b.n.b.b ENSGT01000000214430.a.b.f.a.b ENSGT01000000214430.a.a.a.a.a.b.m.a ENSGT01000000214430.a.b.e ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Arctic ground squirrel MODERN SPECIES 187 KLHL9 (ENSUPAG00010019252) ENSUPAG00010019251 ENSUPAG00010019248 ENSUPAG00010019234 HACD4 (ENSUPAG00010019228) ##22 FOCAD (ENSUPAG00010019097) MLLT3 (ENSUPAG00010019064) SLC24A2 (ENSUPAG00010019009) ##24 ACER2 (ENSUPAG00010018988) RPS6 (ENSUPAG00010018950) DENND4C (ENSUPAG00010018795) PLIN2 (ENSUPAG00010018783) HAUS6 (ENSUPAG00010018761) RRAGA (ENSUPAG00010018757) SAXO1 (ENSUPAG00010018753) ADAMTSL1 (ENSUPAG00010018667) SH3GL2 (ENSUPAG00010018638) ENSUPAG00010018623 ENSUPAG00010018596 Squirrel MODERN SPECIES 252 DMRTA1 (ENSSTOG00000022459) CDKN2B (ENSSTOG00000008721) MTAP (ENSSTOG00000014404) IFNE (ENSSTOG00000024739) ENSSTOG00000019950 ENSSTOG00000021564 ENSSTOG00000033711 ENSSTOG00000027803 ENSSTOG00000033477 ENSSTOG00000021945 HACD4 (ENSSTOG00000015776) ##22 FOCAD (ENSSTOG00000015742) MLLT3 (ENSSTOG00000027195) SLC24A2 (ENSSTOG00000028358) ##24 ACER2 (ENSSTOG00000022847) ENSSTOG00000024906 DENND4C (ENSSTOG00000025059) PLIN2 (ENSSTOG00000008029) HAUS6 (ENSSTOG00000023239) ADAMTSL1 (ENSSTOG00000019570) Alpin marmot MODERN SPECIES 83 ENSMMMG00000005933 ENSMMMG00000005938 ENSMMMG00000005951 ENSMMMG00000005961 ENSMMMG00000005963 ENSMMMG00000005974 KLHL9 (ENSMMMG00000005981) ENSMMMG00000005986 ENSMMMG00000005991 ENSMMMG00000005999 ENSMMMG00000006004 HACD4 (ENSMMMG00000006012) ##22 FOCAD (ENSMMMG00000006025) ENSMMMG00000006205 ENSMMMG00000006210 SLC24A2 (ENSMMMG00000006283) ##24 ACER2 (ENSMMMG00000006333) ENSMMMG00000006347 DENND4C (ENSMMMG00000006441) PLIN2 (ENSMMMG00000006611) HAUS6 (ENSMMMG00000006628) ENSMMMG00000006686 RRAGA (ENSMMMG00000006689) SAXO1 (ENSMMMG00000006694) ENSMMMG00000006707 ADAMTSL1 (ENSMMMG00000006719) ENSMMMG00000006805 Eurasian red squirrel MODERN SPECIES 6 ENSSVLG00005023243 ENSSVLG00005023234 ENSSVLG00005023225 ENSSVLG00005023217 ENSSVLG00005023193 ENSSVLG00005023180 ENSSVLG00005023171 ENSSVLG00005023116 ENSSVLG00005023100 ENSSVLG00005023088 ENSSVLG00005023075 KLHL9 (ENSSVLG00005023061) ENSSVLG00005023046 ENSSVLG00005022997 ENSSVLG00005022981 HACD4 (ENSSVLG00005022946) ##22 ENSSVLG00005022926 ENSSVLG00005022902 ENSSVLG00005022890 FOCAD (ENSSVLG00005022842) ENSSVLG00005022732 SLC24A2 (ENSSVLG00005022584) ##24 ACER2 (ENSSVLG00005022509) RPS6 (ENSSVLG00005022424) DENND4C (ENSSVLG00005022373) PLIN2 (ENSSVLG00005022244) HAUS6 (ENSSVLG00005022104) RRAGA (ENSSVLG00005022081) SAXO1 (ENSSVLG00005021951) ADAMTSL1 (ENSSVLG00005021790) ENSSVLG00005021741 Lagomorpha ANCESTRAL SPECIES 68 ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Pika MODERN SPECIES 3407 ENSOPRG00000006271 HACD4 (ENSOPRG00000006260) ##22 FOCAD (ENSOPRG00000006223) MLLT3 (ENSOPRG00000006206) Rabbit MODERN SPECIES ENSOCUG00000036321 ENSOCUG00000028068 ENSOCUG00000021714 ENSOCUG00000027561 KLHL9 (ENSOCUG00000008548) ENSOCUG00000031005 ENSOCUG00000036366 ENSOCUG00000023654 ENSOCUG00000031030 ENSOCUG00000022525 ENSOCUG00000035691 ENSOCUG00000033635 ENSOCUG00000020925 ENSOCUG00000023921 IFNB1 (ENSOCUG00000021649) HACD4 (ENSOCUG00000029669) ##22 FOCAD (ENSOCUG00000006192) ENSOCUG00000032941 MLLT3 (ENSOCUG00000008137) SLC24A2 (ENSOCUG00000002462) ##24 ACER2 (ENSOCUG00000012439) ENSOCUG00000025352 ENSOCUG00000003336 DENND4C (ENSOCUG00000003320) PLIN2 (ENSOCUG00000012244) HAUS6 (ENSOCUG00000003507) RRAGA (ENSOCUG00000003506) SAXO1 (ENSOCUG00000012362) ADAMTSL1 (ENSOCUG00000004895) SH3GL2 (ENSOCUG00000001183) CNTLN (ENSOCUG00000002551) Platypus MODERN SPECIES 85 DNAH1 (ENSOANG00000041553) GLYCTK (ENSOANG00000013690) WDR82 (ENSOANG00000013610) TXNRD3 (ENSOANG00000011540) CHST13 (ENSOANG00000004469) SLC41A3 (ENSOANG00000044926) NPRL2 (ENSOANG00000010419) CYB561D2 (ENSOANG00000048587) TMEM115 (ENSOANG00000015999) CACNA2D2 (ENSOANG00000010417) C3orf18 (ENSOANG00000043605) HEMK1 (ENSOANG00000038312) CISH (ENSOANG00000050328) ifn6 (ENSOANG00000045969) ifn5 (ENSOANG00000005960) HACD4 (ENSOANG00000045166) ##22 FOCAD (ENSOANG00000007465) MLLT3 (ENSOANG00000010155) PDCD6 (ENSOANG00000010156) CCDC127 (ENSOANG00000042977) SDHA (ENSOANG00000010157) ELP2 (ENSOANG00000010161) ENSOANG00000010162 ABITRAM (ENSOANG00000010167) ENSOANG00000010168 CAVIN4 (ENSOANG00000010169) ENSOANG00000010170 ENSOANG00000010173 LRRC14B (ENSOANG00000010172) SERPINB10 (ENSOANG00000047007) SERPINB2 (ENSOANG00000047223) Anura ANCESTRAL SPECIES 210 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00390000008250 ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000157772 ENSGT00940000153173.a Leishan spiny toad MODERN SPECIES CDKN2A (ENSLLEG00000000609) ENSLLEG00000000656 ENSLLEG00000000745 KLF4 (ENSLLEG00000000747) RAD23B (ENSLLEG00000000766) ZNF462 (ENSLLEG00000000859) ENSLLEG00000000903 ENSLLEG00000000907 TMEM38B (ENSLLEG00000000920) TAL2 (ENSLLEG00000000957) FKTN (ENSLLEG00000000973) FSD1L (ENSLLEG00000001015) ENSLLEG00000001096 SLC44A1 (ENSLLEG00000001121) ENSLLEG00000001258 HACD4 (ENSLLEG00000001275) ##22 ENSLLEG00000001290 ENSLLEG00000001349 MLLT3 (ENSLLEG00000001600) ENSLLEG00000001631 SLC24A2 (ENSLLEG00000001674) ##24 ACER2 (ENSLLEG00000001768) ENSLLEG00000001794 DENND4C (ENSLLEG00000001827) ENSLLEG00000001904 ENSLLEG00000001918 ENSLLEG00000001932 ENSLLEG00000001954 ABCA1 (ENSLLEG00000002068) ENSLLEG00000002539 HAUS6 (ENSLLEG00000002564) Frog MODERN SPECIES dmrta1 (ENSXETG00000005462) cdkn2b (ENSXETG00000005465) mtap (ENSXETG00000005467) ENSXETG00000049369 klf4 (ENSXETG00000005739) rad23b (ENSXETG00000005751) znf462 (ENSXETG00000005759) tmem38b (ENSXETG00000000907) TAL2 (ENSXETG00000045275) fktn (ENSXETG00000000916) fsd1l (ENSXETG00000000909) slc44a1 (ENSXETG00000000925) abca1 (ENSXETG00000000951) nipsnap3a (ENSXETG00000000998) ENSXETG00000039539 hacd4 (ENSXETG00000040140) ##22 focad (ENSXETG00000015484) ENSXETG00000049153 mllt3 (ENSXETG00000015500) ENSXETG00000045971 slc24a2 (ENSXETG00000023099) ##24 acer2 (ENSXETG00000024487) ENSXETG00000038909 rps6 (ENSXETG00000023100) opn3 (ENSXETG00000033066) plin2 (ENSXETG00000023101) dennd4c (ENSXETG00000023104) haus6 (ENSXETG00000024486) ENSXETG00000041813 adamtsl1 (ENSXETG00000023109) sh3gl2 (ENSXETG00000039551) Elephant shark MODERN SPECIES 1560 LRRC2 (ENSCMIG00000011617) sass6 (ENSCMIG00000011622) ENSCMIG00000011655 SPIN2B (ENSCMIG00000011739) nxnl2 (ENSCMIG00000011740) ENSCMIG00000011744 S1PR3 (ENSCMIG00000011753) ENSCMIG00000011754 ENSCMIG00000011757 zgc:86839 (ENSCMIG00000011760) ENSCMIG00000011768 SEMA4D (ENSCMIG00000011779) ENSCMIG00000011794 ENSCMIG00000011795 mtap (ENSCMIG00000011797) HACD4 (ENSCMIG00000011800) ##22 FOCAD (ENSCMIG00000011894) MLLT3 (ENSCMIG00000012175) ENSCMIG00000012176 ##24 ACER2 (ENSCMIG00000012183) rps6 (ENSCMIG00000012192) DENND4C (ENSCMIG00000012237) ENSCMIG00000012266 DMRTA1 (ENSCMIG00000012267) gadd45gb.1 (ENSCMIG00000012272) gng7 (ENSCMIG00000012275) DIRAS2 (ENSCMIG00000012280) syk (ENSCMIG00000012281) auh (ENSCMIG00000012284) nfil3 (ENSCMIG00000012290) ROR2 (ENSCMIG00000012295)