Fungi/Metazoa group ANCESTRAL SPECIES 5 ENSGT00530000062962 #22 ENSGT00390000011669 Bilateria DUPLICATION Bilateria ANCESTRAL SPECIES ENSGT00530000062962.b #22 Chordata ANCESTRAL SPECIES ENSGT00530000062962.b #22 Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES ENSGT00530000062962.b.a #22 Gnathostomata ANCESTRAL SPECIES 196 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000165890 ENSGT00390000010331 #31 Euteleostomi ANCESTRAL SPECIES 6 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00510000052431 ENSGT00390000017828 #8 ENSGT00390000018225.A ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Sarcopterygii ANCESTRAL SPECIES 9 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00510000052431 ENSGT00390000017828 #8 ENSGT00390000018225.A ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Tetrapoda ANCESTRAL SPECIES 11 ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00510000052431 ENSGT00390000017828 #8 ENSGT00390000018225.A ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Amniota ANCESTRAL SPECIES 15 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00510000052431 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Mammalia ANCESTRAL SPECIES 28 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Theria ANCESTRAL SPECIES 22 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Eutheria ANCESTRAL SPECIES 8 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #35 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #35 Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Glires ANCESTRAL SPECIES 15 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Rodentia ANCESTRAL SPECIES 3 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Rodentia_A ANCESTRAL SPECIES 2 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Sciuridae ANCESTRAL SPECIES 11 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Eurasian red squirrel MODERN SPECIES 11 SPG21 (ENSSVLG00005022592) #7 MTFMT (ENSSVLG00005022671) #8 SLC51B (ENSSVLG00005022725) #9 RASL12 (ENSSVLG00005022769) #10 KBTBD13 (ENSSVLG00005022826) #11 UBAP1L (ENSSVLG00005022843) #12 PDCD7 (ENSSVLG00005022889) #13 CLPX (ENSSVLG00005022929) #14 CILP (ENSSVLG00005022969) #15 PARP16 (ENSSVLG00005023083) #16 ENSSVLG00005023161 #17 IGDCC3 (ENSSVLG00005023208) #18 IGDCC4 (ENSSVLG00005023281) #19 DPP8 (ENSSVLG00005023347) #20 ENSSVLG00005023642 #21 HACD3 (ENSSVLG00005023708) #22 INTS14 (ENSSVLG00005023820) #23 SLC24A1 (ENSSVLG00005023979) #24 DENND4A (ENSSVLG00005024160) #25 RAB11A (ENSSVLG00005024246) #26 MEGF11 (ENSSVLG00005024351) #27 DIS3L (ENSSVLG00005024622) #28 TIPIN (ENSSVLG00005024668) #29 MAP2K1 (ENSSVLG00005024707) #30 SNAPC5 (ENSSVLG00005024729) #31 ENSSVLG00005024744 #32 ZWILCH (ENSSVLG00005024833) #33 LCTL (ENSSVLG00005024912) #34 SMAD6 (ENSSVLG00005024946) #35 ENSSVLG00005024968 #36 SMAD3 (ENSSVLG00005024991) #37 Marmotini ANCESTRAL SPECIES 9 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857.w #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Marmotini_b ANCESTRAL SPECIES 4 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857.w #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Arctic ground squirrel MODERN SPECIES 33 ENSUPAG00010000549 ANKDD1A (ENSUPAG00010000557) SPG21 (ENSUPAG00010000593) #7 MTFMT (ENSUPAG00010000615) #8 SLC51B (ENSUPAG00010000624) #9 RASL12 (ENSUPAG00010000634) #10 KBTBD13 (ENSUPAG00010000664) #11 UBAP1L (ENSUPAG00010000672) #12 PDCD7 (ENSUPAG00010000682) #13 CLPX (ENSUPAG00010000698) #14 CILP (ENSUPAG00010000774) #15 PARP16 (ENSUPAG00010000785) #16 IGDCC3 (ENSUPAG00010000811) #18 IGDCC4 (ENSUPAG00010000872) #19 DPP8 (ENSUPAG00010000912) #20 HACD3 (ENSUPAG00010001090) #22 INTS14 (ENSUPAG00010001105) #23 SLC24A1 (ENSUPAG00010001132) #24 DENND4A (ENSUPAG00010001204) #25 RAB11A (ENSUPAG00010001338) #26 MEGF11 (ENSUPAG00010001370) #27 DIS3L (ENSUPAG00010001911) #28 Squirrel MODERN SPECIES 71 ANKDD1A (ENSSTOG00000010088) ENSSTOG00000010101 #7 MTFMT (ENSSTOG00000020944) #8 SLC51B (ENSSTOG00000010125) #9 RASL12 (ENSSTOG00000024973) #10 KBTBD13 (ENSSTOG00000010131) #11 UBAP1L (ENSSTOG00000019679) #12 PDCD7 (ENSSTOG00000003742) #13 CLPX (ENSSTOG00000003763) #14 CILP (ENSSTOG00000026112) #15 PARP16 (ENSSTOG00000008979) #16 IGDCC3 (ENSSTOG00000023391) #18 IGDCC4 (ENSSTOG00000002189) #19 DPP8 (ENSSTOG00000002203) #20 ENSSTOG00000025872 HACD3 (ENSSTOG00000002211) #22 INTS14 (ENSSTOG00000002217) #23 SLC24A1 (ENSSTOG00000002228) #24 DENND4A (ENSSTOG00000026966) #25 RAB11A (ENSSTOG00000015255) #26 MEGF11 (ENSSTOG00000015258) #27 DIS3L (ENSSTOG00000009158) #28 TIPIN (ENSSTOG00000009182) #29 MAP2K1 (ENSSTOG00000009190) #30 SNAPC5 (ENSSTOG00000009201) #31 RPL4 (ENSSTOG00000009221) #32 ZWILCH (ENSSTOG00000009607) #33 LCTL (ENSSTOG00000028073) #34 SMAD6 (ENSSTOG00000000696) #35 SMAD3 (ENSSTOG00000010286) #37 AAGAB (ENSSTOG00000010291) Alpin marmot MODERN SPECIES 7 PIF1 (ENSMMMG00000007343) PLEKHO2 (ENSMMMG00000007337) ANKDD1A (ENSMMMG00000007304) SPG21 (ENSMMMG00000007291) #7 ENSMMMG00000007284 #8 ENSMMMG00000007278 #9 RASL12 (ENSMMMG00000007263) #10 KBTBD13 (ENSMMMG00000007256) #11 UBAP1L (ENSMMMG00000007244) #12 CLPX (ENSMMMG00000007193) #14 CILP (ENSMMMG00000007122) #15 PARP16 (ENSMMMG00000007101) #16 IGDCC3 (ENSMMMG00000007025) #18 IGDCC4 (ENSMMMG00000006948) #19 DPP8 (ENSMMMG00000006899) #20 HACD3 (ENSMMMG00000006884) #22 INTS14 (ENSMMMG00000006868) #23 SLC24A1 (ENSMMMG00000006817) #24 DENND4A (ENSMMMG00000006769) #25 ENSMMMG00000006762 RAB11A (ENSMMMG00000006747) #26 MEGF11 (ENSMMMG00000006311) #27 DIS3L (ENSMMMG00000006220) #28 TIPIN (ENSMMMG00000006196) #29 MAP2K1 (ENSMMMG00000006173) #30 SNAPC5 (ENSMMMG00000006163) #31 RPL4 (ENSMMMG00000006109) #32 ENSMMMG00000006104 ZWILCH (ENSMMMG00000006077) #33 LCTL (ENSMMMG00000006061) #34 SMAD6 (ENSMMMG00000006032) #35 Hystricomorpha ANCESTRAL SPECIES 36 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.vb #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Hystricomorpha_a ANCESTRAL SPECIES 38 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.vb #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Hystricomorpha_b ANCESTRAL SPECIES 35 ENSGT00950000183014.f.b.a.b ENSGT00530000064244.a ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.vb #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Long-tailed chinchilla MODERN SPECIES 157 ENSCLAG00000010665 GP9 (ENSCLAG00000012298) SPG21 (ENSCLAG00000011678) #7 MTFMT (ENSCLAG00000014170) #8 SLC51B (ENSCLAG00000011594) #9 RASL12 (ENSCLAG00000011152) #10 KBTBD13 (ENSCLAG00000018082) #11 UBAP1L (ENSCLAG00000010285) #12 PDCD7 (ENSCLAG00000007922) #13 CLPX (ENSCLAG00000016601) #14 CILP (ENSCLAG00000014495) #15 PARP16 (ENSCLAG00000012092) #16 IGDCC3 (ENSCLAG00000010244) #18 IGDCC4 (ENSCLAG00000007751) #19 DPP8 (ENSCLAG00000014937) #20 HACD3 (ENSCLAG00000010725) #22 INTS14 (ENSCLAG00000009395) #23 SLC24A1 (ENSCLAG00000013073) #24 DENND4A (ENSCLAG00000007003) #25 RAB11A (ENSCLAG00000007435) #26 MEGF11 (ENSCLAG00000013146) #27 DIS3L (ENSCLAG00000005741) #28 TIPIN (ENSCLAG00000004924) #29 MAP2K1 (ENSCLAG00000013042) #30 SNAPC5 (ENSCLAG00000011660) #31 RPL4 (ENSCLAG00000010827) #32 ZWILCH (ENSCLAG00000010124) #33 LCTL (ENSCLAG00000004564) #34 ENSCLAG00000005550 #35 SMAD3 (ENSCLAG00000005027) #37 AAGAB (ENSCLAG00000008364) Degu MODERN SPECIES 67 SPG21 (ENSODEG00000016267) #7 ENSODEG00000017695 #8 SLC51B (ENSODEG00000016552) #9 RASL12 (ENSODEG00000016297) #10 KBTBD13 (ENSODEG00000020550) #11 ENSODEG00000016276 #12 PDCD7 (ENSODEG00000016758) #13 ENSODEG00000016607 CLPX (ENSODEG00000016361) #14 CILP (ENSODEG00000016085) #15 ENSODEG00000020368 PARP16 (ENSODEG00000016601) #16 IGDCC3 (ENSODEG00000016285) #18 IGDCC4 (ENSODEG00000016455) #19 DPP8 (ENSODEG00000016356) #20 HACD3 (ENSODEG00000016975) #22 INTS14 (ENSODEG00000017006) #23 SLC24A1 (ENSODEG00000016047) #24 ENSODEG00000016544 #25 ENSODEG00000016435 ENSODEG00000016878 #26 MEGF11 (ENSODEG00000015967) #27 DIS3L (ENSODEG00000015811) #28 MAP2K1 (ENSODEG00000016739) #30 ENSODEG00000016495 #32 ZWILCH (ENSODEG00000016374) #33 LCTL (ENSODEG00000016271) #34 ENSODEG00000020317 SMAD6 (ENSODEG00000016272) #35 SMAD3 (ENSODEG00000015739) #37 ENSODEG00000015886 Guinea pig MODERN SPECIES 101 BNIP2 (ENSCPOG00000004962) GTF2A2 (ENSCPOG00000035441) GCNT3 (ENSCPOG00000022353) FAM81A (ENSCPOG00000015628) MYO1E (ENSCPOG00000002570) CCNB2 (ENSCPOG00000026977) RNF111 (ENSCPOG00000010550) SLTM (ENSCPOG00000026109) MINDY2 (ENSCPOG00000002287) CLPX (ENSCPOG00000003391) #14 CILP (ENSCPOG00000036223) #15 PARP16 (ENSCPOG00000025232) #16 IGDCC3 (ENSCPOG00000006751) #18 IGDCC4 (ENSCPOG00000004519) #19 DPP8 (ENSCPOG00000014124) #20 HACD3 (ENSCPOG00000013593) #22 INTS14 (ENSCPOG00000000764) #23 SLC24A1 (ENSCPOG00000013596) #24 DENND4A (ENSCPOG00000013602) #25 RAB11A (ENSCPOG00000037599) #26 MEGF11 (ENSCPOG00000006468) #27 DIS3L (ENSCPOG00000000250) #28 TIPIN (ENSCPOG00000000251) #29 MAP2K1 (ENSCPOG00000003053) #30 RPL4 (ENSCPOG00000003055) #32 ZWILCH (ENSCPOG00000001241) #33 LCTL (ENSCPOG00000001245) #34 ENSCPOG00000026722 ENSCPOG00000003533 ENSCPOG00000013176 ENSCPOG00000015403 Naked mole-rat female MODERN SPECIES 19 ENSHGLG00000048650 ENSHGLG00000016618 SPG21 (ENSHGLG00000015251) #7 ENSHGLG00000048707 #8 SLC51B (ENSHGLG00000040758) #9 ENSHGLG00000008881 #10 ENSHGLG00000007567 #11 UBAP1L (ENSHGLG00000005478) #12 PDCD7 (ENSHGLG00000005335) #13 CLPX (ENSHGLG00000008735) #14 CILP (ENSHGLG00000011932) #15 PARP16 (ENSHGLG00000010657) #16 IGDCC3 (ENSHGLG00000006674) #18 IGDCC4 (ENSHGLG00000017462) #19 DPP8 (ENSHGLG00000014997) #20 HACD3 (ENSHGLG00000011870) #22 INTS14 (ENSHGLG00000010722) #23 SLC24A1 (ENSHGLG00000008872) #24 DENND4A (ENSHGLG00000009810) #25 ENSHGLG00000044288 RAB11A (ENSHGLG00000048551) #26 MEGF11 (ENSHGLG00000011012) #27 ENSHGLG00000007770 #28 ENSHGLG00000005971 #29 ENSHGLG00000048822 ENSHGLG00000010036 #30 ENSHGLG00000040904 #31 ENSHGLG00000008054 #32 ZWILCH (ENSHGLG00000016059) #33 LCTL (ENSHGLG00000015669) #34 SMAD6 (ENSHGLG00000008453) #35 Rodentia_B ANCESTRAL SPECIES 11 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Kangaroo rat MODERN SPECIES 330 Pif1 (ENSDORG00000010176) Plekho2 (ENSDORG00000010180) Ankdd1a (ENSDORG00000008259) Spg21 (ENSDORG00000003605) #7 Mtfmt (ENSDORG00000004684) #8 Slc51b (ENSDORG00000023591) #9 Rasl12 (ENSDORG00000000119) #10 Kbtbd13 (ENSDORG00000024320) #11 Ubap1l (ENSDORG00000024217) #12 Pdcd7 (ENSDORG00000008214) #13 Clpx (ENSDORG00000016116) #14 Cilp (ENSDORG00000014410) #15 Parp16 (ENSDORG00000028265) #16 Igdcc4 (ENSDORG00000015148) #19 Dpp8 (ENSDORG00000009050) #20 Hacd3 (ENSDORG00000009307) #22 Ints14 (ENSDORG00000009309) #23 Slc24a1 (ENSDORG00000007185) #24 Dennd4a (ENSDORG00000002146) #25 ENSDORG00000028034 #26 ENSDORG00000026125 Megf11 (ENSDORG00000001008) #27 Dis3l (ENSDORG00000014909) #28 Tipin (ENSDORG00000028988) #29 Map2k1 (ENSDORG00000001301) #30 Snapc5 (ENSDORG00000030051) #31 Rpl4 (ENSDORG00000016287) #32 Zwilch (ENSDORG00000016288) #33 Lctl (ENSDORG00000016291) #34 Smad6 (ENSDORG00000028234) #35 ENSDORG00000026894 Myomorpha ANCESTRAL SPECIES 25 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Lesser Egyptian jerboa MODERN SPECIES 92 Plekho2 (ENSJJAG00000014316) Ankdd1a (ENSJJAG00000014309) ENSJJAG00000013627 #7 Mtfmt (ENSJJAG00000021378) #8 Slc51b (ENSJJAG00000017452) #9 Rasl12 (ENSJJAG00000019387) #10 ENSJJAG00000011177 #11 ENSJJAG00000016922 #12 Pdcd7 (ENSJJAG00000012031) #13 Clpx (ENSJJAG00000012714) #14 Cilp (ENSJJAG00000012559) #15 Parp16 (ENSJJAG00000019303) #16 Igdcc3 (ENSJJAG00000010487) #18 Igdcc4 (ENSJJAG00000022092) #19 Dpp8 (ENSJJAG00000018252) #20 Hacd3 (ENSJJAG00000016608) #22 Ints14 (ENSJJAG00000005359) #23 Slc24a1 (ENSJJAG00000009344) #24 ENSJJAG00000012113 #25 ENSJJAG00000015445 #26 Megf11 (ENSJJAG00000023890) #27 ENSJJAG00000019234 Dis3l (ENSJJAG00000016147) #28 Tipin (ENSJJAG00000017947) #29 Map2k1 (ENSJJAG00000021452) #30 Snapc5 (ENSJJAG00000022013) #31 ENSJJAG00000013677 #32 Zwilch (ENSJJAG00000010189) #33 Lctl (ENSJJAG00000013579) #34 Smad6 (ENSJJAG00000019623) #35 Smad3 (ENSJJAG00000021414) #37 Muroidea ANCESTRAL SPECIES 23 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Muroidea_A ANCESTRAL SPECIES 6 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Cricetidae ANCESTRAL SPECIES 4 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Cricetinae ANCESTRAL SPECIES 6 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.kb #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Chinese hamster chok1gshd MODERN SPECIES 284 Plekho2 (ENSCGRG00001003734) Ankdd1a (ENSCGRG00001014311) Spg21 (ENSCGRG00001022317) #7 Mtfmt (ENSCGRG00001010938) #8 Slc51b (ENSCGRG00001013856) #9 Rasl12 (ENSCGRG00001015470) #10 Kbtbd13 (ENSCGRG00001012125) #11 Ubap1l (ENSCGRG00001023243) #12 Pdcd7 (ENSCGRG00001011256) #13 Clpx (ENSCGRG00001020872) #14 Cilp (ENSCGRG00001023319) #15 Parp16 (ENSCGRG00001011381) #16 Igdcc3 (ENSCGRG00001015803) #18 Igdcc4 (ENSCGRG00001004819) #19 Dpp8 (ENSCGRG00001024771) #20 Hacd3 (ENSCGRG00001019214) #22 Ints14 (ENSCGRG00001022061) #23 Slc24a1 (ENSCGRG00001023812) #24 Dennd4a (ENSCGRG00001019979) #25 Rab11a (ENSCGRG00001023313) #26 Megf11 (ENSCGRG00001019210) #27 Dis3l (ENSCGRG00001017825) #28 Tipin (ENSCGRG00001018146) #29 Snapc5 (ENSCGRG00001013968) #31 Zwilch (ENSCGRG00001018206) #33 Lctl (ENSCGRG00001017716) #34 Smad6 (ENSCGRG00001002733) #35 Smad3 (ENSCGRG00001013999) #37 Aagab (ENSCGRG00001020082) Iqch (ENSCGRG00001006084) ENSCGRG00001000811 Golden Hamster MODERN SPECIES 672 Ankdd1a (ENSMAUG00000009278) Spg21 (ENSMAUG00000011488) #7 Mtfmt (ENSMAUG00000019476) #8 Slc51b (ENSMAUG00000016209) #9 Rasl12 (ENSMAUG00000021367) #10 Kbtbd13 (ENSMAUG00000007549) #11 Ubap1l (ENSMAUG00000019477) #12 Pdcd7 (ENSMAUG00000010175) #13 Clpx (ENSMAUG00000018798) #14 ENSMAUG00000009833 Cilp (ENSMAUG00000019346) #15 Parp16 (ENSMAUG00000014432) #16 Igdcc3 (ENSMAUG00000019761) #18 Igdcc4 (ENSMAUG00000021589) #19 Dpp8 (ENSMAUG00000020059) #20 Hacd3 (ENSMAUG00000004278) #22 Ints14 (ENSMAUG00000020937) #23 Slc24a1 (ENSMAUG00000012813) #24 Dennd4a (ENSMAUG00000018527) #25 Rab11a (ENSMAUG00000018551) #26 Megf11 (ENSMAUG00000003129) #27 Dis3l (ENSMAUG00000008265) #28 Tipin (ENSMAUG00000012421) #29 Map2k1 (ENSMAUG00000011379) #30 Snapc5 (ENSMAUG00000008645) #31 Rpl4 (ENSMAUG00000018867) #32 Zwilch (ENSMAUG00000021210) #33 Lctl (ENSMAUG00000009957) #34 Smad6 (ENSMAUG00000009859) #35 Smad3 (ENSMAUG00000022258) #37 Aagab (ENSMAUG00000005383) Cricetidae_B ANCESTRAL SPECIES 24 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Northern American deer mouse MODERN SPECIES 20 Plekho2 (ENSPEMG00000020353) Ankdd1a (ENSPEMG00000020958) Spg21 (ENSPEMG00000021006) #7 Mtfmt (ENSPEMG00000021536) #8 Slc51b (ENSPEMG00000030201) #9 Rasl12 (ENSPEMG00000026265) #10 Kbtbd13 (ENSPEMG00000005949) #11 Ubap1l (ENSPEMG00000017986) #12 Pdcd7 (ENSPEMG00000001830) #13 Clpx (ENSPEMG00000021528) #14 Cilp (ENSPEMG00000021273) #15 Parp16 (ENSPEMG00000022071) #16 Igdcc3 (ENSPEMG00000021097) #18 Igdcc4 (ENSPEMG00000020857) #19 Dpp8 (ENSPEMG00000024195) #20 Hacd3 (ENSPEMG00000008076) #22 Ints14 (ENSPEMG00000008550) #23 Slc24a1 (ENSPEMG00000022814) #24 Dennd4a (ENSPEMG00000022452) #25 ENSPEMG00000021125 #26 Megf11 (ENSPEMG00000017797) #27 Dis3l (ENSPEMG00000001213) #28 Tipin (ENSPEMG00000002370) #29 Map2k1 (ENSPEMG00000007282) #30 Snapc5 (ENSPEMG00000007852) #31 Rpl4 (ENSPEMG00000012064) #32 Zwilch (ENSPEMG00000014485) #33 Lctl (ENSPEMG00000016229) #34 Smad6 (ENSPEMG00000017040) #35 Smad3 (ENSPEMG00000028676) #37 Aagab (ENSPEMG00000018465) Prairie vole MODERN SPECIES 13 Ankdd1a (ENSMOCG00000010903) ENSMOCG00000008827 Spg21 (ENSMOCG00000018012) #7 Mtfmt (ENSMOCG00000022110) #8 Slc51b (ENSMOCG00000016544) #9 Rasl12 (ENSMOCG00000022051) #10 Kbtbd13 (ENSMOCG00000001263) #11 Ubap1l (ENSMOCG00000021453) #12 Pdcd7 (ENSMOCG00000007159) #13 Clpx (ENSMOCG00000011980) #14 Cilp (ENSMOCG00000022194) #15 Parp16 (ENSMOCG00000014635) #16 Igdcc3 (ENSMOCG00000017628) #18 Igdcc4 (ENSMOCG00000017733) #19 Dpp8 (ENSMOCG00000018103) #20 Hacd3 (ENSMOCG00000004995) #22 Ints14 (ENSMOCG00000020364) #23 Slc24a1 (ENSMOCG00000002968) #24 Dennd4a (ENSMOCG00000008521) #25 Rab11a (ENSMOCG00000021138) #26 Megf11 (ENSMOCG00000003573) #27 Dis3l (ENSMOCG00000005278) #28 Tipin (ENSMOCG00000010343) #29 Map2k1 (ENSMOCG00000013072) #30 Snapc5 (ENSMOCG00000015348) #31 ENSMOCG00000021901 #32 Zwilch (ENSMOCG00000017159) #33 Lctl (ENSMOCG00000004744) #34 Smad6 (ENSMOCG00000014458) #35 Smad3 (ENSMOCG00000018490) #37 Aagab (ENSMOCG00000021340) Murinae ANCESTRAL SPECIES 3 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Mus ANCESTRAL SPECIES 4 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Mus_A ANCESTRAL SPECIES 4 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Mus_B ANCESTRAL SPECIES 3 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828.s #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000154925.c.a ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Mouse MODERN SPECIES 18 Plekho2 (ENSMUSG00000050721) Ankdd1a (ENSMUSG00000066510) Spg21 (ENSMUSG00000032388) #7 Mtfmt (ENSMUSG00000059183) #8 Slc51b (ENSMUSG00000053862) #9 Rasl12 (ENSMUSG00000041696) #10 Kbtbd13 (ENSMUSG00000054978) #11 Ubap1l (ENSMUSG00000086228) #12 Pdcd7 (ENSMUSG00000041837) #13 Clpx (ENSMUSG00000015357) #14 Cilp (ENSMUSG00000042254) #15 Parp16 (ENSMUSG00000032392) #16 Igdcc3 (ENSMUSG00000032394) #18 Igdcc4 (ENSMUSG00000032816) #19 Dpp8 (ENSMUSG00000032393) #20 Hacd3 (ENSMUSG00000033629) #22 Ints14 (ENSMUSG00000034263) #23 Slc24a1 (ENSMUSG00000034452) #24 Dennd4a (ENSMUSG00000053641) #25 Rab11a (ENSMUSG00000004771) #26 Megf11 (ENSMUSG00000036466) #27 Dis3l (ENSMUSG00000032396) #28 Tipin (ENSMUSG00000032397) #29 Uchl4 (ENSMUSG00000035337) Map2k1 (ENSMUSG00000004936) #30 Snapc5 (ENSMUSG00000032398) #31 Rpl4 (ENSMUSG00000032399) #32 Zwilch (ENSMUSG00000032400) #33 Lctl (ENSMUSG00000032401) #34 Smad6 (ENSMUSG00000036867) #35 Smad3 (ENSMUSG00000032402) #37 Mus_C ANCESTRAL SPECIES 8 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828.s #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000154925.c.a ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Steppe mouse MODERN SPECIES 3365 Spg21 (ENSMSIG00000005730) #7 Mtfmt (ENSMSIG00000005704) #8 Slc51b (ENSMSIG00000005686) #9 Rasl12 (ENSMSIG00000005656) #10 Kbtbd13 (ENSMSIG00000005647) #11 ENSMSIG00000005605 #12 Pdcd7 (ENSMSIG00000005596) #13 ENSMSIG00000005574 ENSMSIG00000005568 Clpx (ENSMSIG00000005427) #14 Cilp (ENSMSIG00000005391) #15 Parp16 (ENSMSIG00000005362) #16 Igdcc3 (ENSMSIG00000005288) #18 Igdcc4 (ENSMSIG00000005197) #19 Dpp8 (ENSMSIG00000005153) #20 Hacd3 (ENSMSIG00000005101) #22 Ints14 (ENSMSIG00000005077) #23 Slc24a1 (ENSMSIG00000005039) #24 Dennd4a (ENSMSIG00000004975) #25 Rab11a (ENSMSIG00000004938) #26 Megf11 (ENSMSIG00000004481) #27 Dis3l (ENSMSIG00000004353) #28 Tipin (ENSMSIG00000004296) #29 Uchl4 (ENSMSIG00000004289) Map2k1 (ENSMSIG00000004246) #30 Snapc5 (ENSMSIG00000004231) #31 Rpl4 (ENSMSIG00000004124) #32 Zwilch (ENSMSIG00000003872) #33 Lctl (ENSMSIG00000003776) #34 ENSMSIG00000003769 ENSMSIG00000003749 spretus MODERN SPECIES 18 Plekho2 (MGP_SPRETEiJ_G0033504) Ankdd1a (MGP_SPRETEiJ_G0033503) Spg21 (MGP_SPRETEiJ_G0033502) #7 Mtfmt (MGP_SPRETEiJ_G0033501) #8 Slc51b (MGP_SPRETEiJ_G0033500) #9 Rasl12 (MGP_SPRETEiJ_G0033499) #10 Kbtbd13 (MGP_SPRETEiJ_G0033498) #11 Ubap1l (MGP_SPRETEiJ_G0033497) #12 Pdcd7 (MGP_SPRETEiJ_G0033496) #13 Clpx (MGP_SPRETEiJ_G0033495) #14 Cilp (MGP_SPRETEiJ_G0033494) #15 Parp16 (MGP_SPRETEiJ_G0033493) #16 Igdcc3 (MGP_SPRETEiJ_G0033492) #18 Igdcc4 (MGP_SPRETEiJ_G0033491) #19 Dpp8 (MGP_SPRETEiJ_G0033490) #20 Hacd3 (MGP_SPRETEiJ_G0033489) #22 Ints14 (MGP_SPRETEiJ_G0033488) #23 Slc24a1 (MGP_SPRETEiJ_G0033487) #24 Dennd4a (MGP_SPRETEiJ_G0033486) #25 Rab11a (MGP_SPRETEiJ_G0033485) #26 Megf11 (MGP_SPRETEiJ_G0033484) #27 Dis3l (MGP_SPRETEiJ_G0033483) #28 Tipin (MGP_SPRETEiJ_G0033482) #29 MGP_SPRETEiJ_G0033481 Map2k1 (MGP_SPRETEiJ_G0033480) #30 Snapc5 (MGP_SPRETEiJ_G0033479) #31 Rpl4 (MGP_SPRETEiJ_G0033478) #32 Zwilch (MGP_SPRETEiJ_G0033477) #33 Lctl (MGP_SPRETEiJ_G0033476) #34 Smad6 (MGP_SPRETEiJ_G0033475) #35 Smad3 (MGP_SPRETEiJ_G0033474) #37 Ryukyu mouse MODERN SPECIES 18 Plekho2 (MGP_CAROLIEiJ_G0032365) Ankdd1a (MGP_CAROLIEiJ_G0032364) Spg21 (MGP_CAROLIEiJ_G0032363) #7 Mtfmt (MGP_CAROLIEiJ_G0032362) #8 Slc51b (MGP_CAROLIEiJ_G0032361) #9 Rasl12 (MGP_CAROLIEiJ_G0032360) #10 Kbtbd13 (MGP_CAROLIEiJ_G0032359) #11 Ubap1l (MGP_CAROLIEiJ_G0032358) #12 Pdcd7 (MGP_CAROLIEiJ_G0032357) #13 Clpx (MGP_CAROLIEiJ_G0032356) #14 MGP_CAROLIEiJ_G0032355 Parp16 (MGP_CAROLIEiJ_G0032354) #16 Igdcc3 (MGP_CAROLIEiJ_G0032353) #18 Igdcc4 (MGP_CAROLIEiJ_G0032352) #19 Dpp8 (MGP_CAROLIEiJ_G0032351) #20 Hacd3 (MGP_CAROLIEiJ_G0032350) #22 Ints14 (MGP_CAROLIEiJ_G0032349) #23 Slc24a1 (MGP_CAROLIEiJ_G0032348) #24 Dennd4a (MGP_CAROLIEiJ_G0032347) #25 Rab11a (MGP_CAROLIEiJ_G0032346) #26 Megf11 (MGP_CAROLIEiJ_G0032345) #27 Dis3l (MGP_CAROLIEiJ_G0032344) #28 Tipin (MGP_CAROLIEiJ_G0032343) #29 MGP_CAROLIEiJ_G0032342 Map2k1 (MGP_CAROLIEiJ_G0032341) #30 Snapc5 (MGP_CAROLIEiJ_G0032340) #31 Rpl4 (MGP_CAROLIEiJ_G0032339) #32 Zwilch (MGP_CAROLIEiJ_G0032338) #33 Lctl (MGP_CAROLIEiJ_G0032337) #34 Smad6 (MGP_CAROLIEiJ_G0032336) #35 Smad3 (MGP_CAROLIEiJ_G0032335) #37 Shrew mouse MODERN SPECIES 1 Plekho2 (MGP_PahariEiJ_G0015230) Ankdd1a (MGP_PahariEiJ_G0015229) Spg21 (MGP_PahariEiJ_G0015228) #7 Mtfmt (MGP_PahariEiJ_G0015227) #8 Slc51b (MGP_PahariEiJ_G0015226) #9 Rasl12 (MGP_PahariEiJ_G0015225) #10 Kbtbd13 (MGP_PahariEiJ_G0015224) #11 Ubap1l (MGP_PahariEiJ_G0015223) #12 Pdcd7 (MGP_PahariEiJ_G0015222) #13 Clpx (MGP_PahariEiJ_G0015221) #14 MGP_PahariEiJ_G0015220 Parp16 (MGP_PahariEiJ_G0015219) #16 MGP_PahariEiJ_G0015218 #18 Igdcc4 (MGP_PahariEiJ_G0015217) #19 Dpp8 (MGP_PahariEiJ_G0015216) #20 Hacd3 (MGP_PahariEiJ_G0015215) #22 Ints14 (MGP_PahariEiJ_G0015214) #23 Slc24a1 (MGP_PahariEiJ_G0015213) #24 Dennd4a (MGP_PahariEiJ_G0015212) #25 Rab11a (MGP_PahariEiJ_G0015211) #26 Megf11 (MGP_PahariEiJ_G0015210) #27 Dis3l (MGP_PahariEiJ_G0015209) #28 Tipin (MGP_PahariEiJ_G0015208) #29 Map2k1 (MGP_PahariEiJ_G0015207) #30 Snapc5 (MGP_PahariEiJ_G0015206) #31 Rpl4 (MGP_PahariEiJ_G0015205) #32 Zwilch (MGP_PahariEiJ_G0015204) #33 Smad6 (MGP_PahariEiJ_G0015202) #35 Smad3 (MGP_PahariEiJ_G0015201) #37 Aagab (MGP_PahariEiJ_G0015200) Iqch (MGP_PahariEiJ_G0015199) Rat MODERN SPECIES 18 Ankdd1a (ENSRNOG00000015554) Spg21 (ENSRNOG00000015019) #7 Mtfmt (ENSRNOG00000014602) #8 Slc51b (ENSRNOG00000028889) #9 Rasl12 (ENSRNOG00000032339) #10 AABR07070456.1 (ENSRNOG00000014383) #11 Ubap1l (ENSRNOG00000050979) #12 Pdcd7 (ENSRNOG00000014340) #13 Clpx (ENSRNOG00000030225) #14 Cilp (ENSRNOG00000029911) #15 Parp16 (ENSRNOG00000029127) #16 ENSRNOG00000063066 Igdcc3 (ENSRNOG00000030800) #18 Igdcc4 (ENSRNOG00000033496) #19 Dpp8 (ENSRNOG00000019105) #20 Hacd3 (ENSRNOG00000030232) #22 Ints14 (ENSRNOG00000012469) #23 Slc24a1 (ENSRNOG00000052051) #24 Dennd4a (ENSRNOG00000011739) #25 LOC120094392 (ENSRNOG00000071140) Rab11a (ENSRNOG00000011302) #26 Megf11 (ENSRNOG00000010634) #27 Dis3l (ENSRNOG00000010537) #28 Tipin (ENSRNOG00000043068) #29 Map2k1 (ENSRNOG00000010176) #30 Rpl4 (ENSRNOG00000009378) #32 Zwilch (ENSRNOG00000009303) #33 Lctl (ENSRNOG00000009193) #34 Smad6 (ENSRNOG00000009173) #35 Smad3 (ENSRNOG00000008620) #37 Aagab (ENSRNOG00000008424) Upper Galilee mountains blind mole rat MODERN SPECIES 955 ENSNGAG00000003639 Ankdd1a (ENSNGAG00000009321) ENSNGAG00000021527 #7 Mtfmt (ENSNGAG00000023307) #8 Slc51b (ENSNGAG00000016122) #9 Rasl12 (ENSNGAG00000019976) #10 ENSNGAG00000011880 #11 Ubap1l (ENSNGAG00000022357) #12 Pdcd7 (ENSNGAG00000018415) #13 Clpx (ENSNGAG00000001488) #14 Cilp (ENSNGAG00000019472) #15 Parp16 (ENSNGAG00000004884) #16 Igdcc3 (ENSNGAG00000012915) #18 Igdcc4 (ENSNGAG00000022064) #19 Dpp8 (ENSNGAG00000019579) #20 Hacd3 (ENSNGAG00000016924) #22 Ints14 (ENSNGAG00000007105) #23 Slc24a1 (ENSNGAG00000010674) #24 ENSNGAG00000022619 #25 Rab11a (ENSNGAG00000013726) #26 Megf11 (ENSNGAG00000011352) #27 Dis3l (ENSNGAG00000017008) #28 Tipin (ENSNGAG00000018237) #29 Map2k1 (ENSNGAG00000006894) #30 Snapc5 (ENSNGAG00000006133) #31 ENSNGAG00000006653 #32 Zwilch (ENSNGAG00000016626) #33 Lctl (ENSNGAG00000012911) #34 Smad6 (ENSNGAG00000021223) #35 ENSNGAG00000022756 Smad3 (ENSNGAG00000023535) #37 Lagomorpha ANCESTRAL SPECIES 7 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00950000183167.a.b.a #36 ENSGT00940000153499.b.b #37 Rabbit MODERN SPECIES 8 ANKDD1A (ENSOCUG00000005353) ENSOCUG00000016136 #7 MTFMT (ENSOCUG00000016147) #8 SLC51B (ENSOCUG00000010723) #9 RASL12 (ENSOCUG00000010729) #10 KBTBD13 (ENSOCUG00000022127) #11 UBAP1L (ENSOCUG00000029183) #12 ENSOCUG00000032347 PDCD7 (ENSOCUG00000007292) #13 CLPX (ENSOCUG00000007293) #14 CILP (ENSOCUG00000007302) #15 PARP16 (ENSOCUG00000007306) #16 IGDCC3 (ENSOCUG00000000310) #18 IGDCC4 (ENSOCUG00000000312) #19 DPP8 (ENSOCUG00000011751) #20 HACD3 (ENSOCUG00000007513) #22 INTS14 (ENSOCUG00000007520) #23 ENSOCUG00000027844 #24 DENND4A (ENSOCUG00000007953) #25 RAB11A (ENSOCUG00000014755) #26 MEGF11 (ENSOCUG00000014760) #27 DIS3L (ENSOCUG00000002206) #28 TIPIN (ENSOCUG00000002212) #29 ENSOCUG00000023060 MAP2K1 (ENSOCUG00000008782) #30 SNAPC5 (ENSOCUG00000039231) #31 ENSOCUG00000008794 #32 ZWILCH (ENSOCUG00000008800) #33 LCTL (ENSOCUG00000021771) #34 ENSOCUG00000006134 #35 ENSOCUG00000014186 #36 Pika MODERN SPECIES 3550 IGDCC3 (ENSOPRG00000000533) #18 IGDCC4 (ENSOPRG00000000551) #19 DPP8 (ENSOPRG00000000578) #20 HACD3 (ENSOPRG00000000598) #22 INTS14 (ENSOPRG00000000613) #23 SLC24A1 (ENSOPRG00000000623) #24 ENSOPRG00000000630 #25 Tree shrew MODERN SPECIES 4089 ENSTBEG00000000605 #20 HACD3 (ENSTBEG00000000884) #22 INTS14 (ENSTBEG00000001112) #23 Primates ANCESTRAL SPECIES 2 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #35 Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Lemuriformes ANCESTRAL SPECIES 8 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Mouse lemur MODERN SPECIES 22 PIF1 (ENSMICG00000007373) PLEKHO2 (ENSMICG00000047618) ANKDD1A (ENSMICG00000002854) SPG21 (ENSMICG00000002862) #7 MTFMT (ENSMICG00000002867) #8 SLC51B (ENSMICG00000046031) #9 RASL12 (ENSMICG00000000624) #10 UBAP1L (ENSMICG00000034396) #12 PDCD7 (ENSMICG00000034171) #13 CLPX (ENSMICG00000014970) #14 CILP (ENSMICG00000015198) #15 PARP16 (ENSMICG00000004993) #16 IGDCC3 (ENSMICG00000003513) #18 IGDCC4 (ENSMICG00000046639) #19 DPP8 (ENSMICG00000000049) #20 HACD3 (ENSMICG00000003985) #22 INTS14 (ENSMICG00000003990) #23 SLC24A1 (ENSMICG00000003996) #24 ENSMICG00000034025 ENSMICG00000028970 ENSMICG00000044235 DENND4A (ENSMICG00000004000) #25 RAB11A (ENSMICG00000041504) #26 ENSMICG00000035335 MEGF11 (ENSMICG00000004354) #27 DIS3L (ENSMICG00000004374) #28 TIPIN (ENSMICG00000004386) #29 MAP2K1 (ENSMICG00000004393) #30 SNAPC5 (ENSMICG00000004401) #31 RPL4 (ENSMICG00000004419) #32 ZWILCH (ENSMICG00000004429) #33 Lemuriformes_a ANCESTRAL SPECIES 1 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00940000170330 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 Coquerels sifaka MODERN SPECIES 321 PLEKHO2 (ENSPCOG00000015719) ANKDD1A (ENSPCOG00000020935) SPG21 (ENSPCOG00000025563) #7 ENSPCOG00000019663 SLC51B (ENSPCOG00000020658) #9 RASL12 (ENSPCOG00000005311) #10 UBAP1L (ENSPCOG00000021980) #12 PDCD7 (ENSPCOG00000020644) #13 ENSPCOG00000017733 CLPX (ENSPCOG00000024478) #14 CILP (ENSPCOG00000019277) #15 PARP16 (ENSPCOG00000019309) #16 IGDCC3 (ENSPCOG00000012584) #18 IGDCC4 (ENSPCOG00000024000) #19 DPP8 (ENSPCOG00000013983) #20 HACD3 (ENSPCOG00000013603) #22 INTS14 (ENSPCOG00000022468) #23 SLC24A1 (ENSPCOG00000028227) #24 DENND4A (ENSPCOG00000015787) #25 ENSPCOG00000008655 MEGF11 (ENSPCOG00000016212) #27 ENSPCOG00000020947 DIS3L (ENSPCOG00000015776) #28 ENSPCOG00000024692 MAP2K1 (ENSPCOG00000019709) #30 SNAPC5 (ENSPCOG00000018513) #31 RPL4 (ENSPCOG00000018140) #32 ZWILCH (ENSPCOG00000014834) #33 LCTL (ENSPCOG00000018210) #34 AKAP4 (ENSPCOG00000016065) CCNB3 (ENSPCOG00000017115) Greater bamboo lemur MODERN SPECIES 105 HERC1 (ENSPSMG00000003501) FBXL22 (ENSPSMG00000003647) USP3 (ENSPSMG00000003840) CA12 (ENSPSMG00000004183) APH1B (ENSPSMG00000004224) RAB8B (ENSPSMG00000004246) ENSPSMG00000004263 LACTB (ENSPSMG00000004273) TPM1 (ENSPSMG00000005012) ENSPSMG00000005970 TLN2 (ENSPSMG00000006148) PARP16 (ENSPSMG00000006207) #16 IGDCC3 (ENSPSMG00000006222) #18 IGDCC4 (ENSPSMG00000006239) #19 DPP8 (ENSPSMG00000006379) #20 HACD3 (ENSPSMG00000006624) #22 INTS14 (ENSPSMG00000006782) #23 SLC24A1 (ENSPSMG00000006805) #24 DENND4A (ENSPSMG00000006976) #25 RAB11A (ENSPSMG00000007014) #26 MEGF11 (ENSPSMG00000007120) #27 Bushbaby MODERN SPECIES 126 PLEKHO2 (ENSOGAG00000010379) SPG21 (ENSOGAG00000010385) #7 MTFMT (ENSOGAG00000010388) #8 SLC51B (ENSOGAG00000010390) #9 RASL12 (ENSOGAG00000010391) #10 KBTBD13 (ENSOGAG00000032677) #11 UBAP1L (ENSOGAG00000026705) #12 PDCD7 (ENSOGAG00000028484) #13 CLPX (ENSOGAG00000013626) #14 CILP (ENSOGAG00000033324) #15 PARP16 (ENSOGAG00000013641) #16 ENSOGAG00000027481 IGDCC3 (ENSOGAG00000013646) #18 IGDCC4 (ENSOGAG00000034827) #19 DPP8 (ENSOGAG00000013651) #20 HACD3 (ENSOGAG00000013661) #22 INTS14 (ENSOGAG00000013667) #23 SLC24A1 (ENSOGAG00000013674) #24 DENND4A (ENSOGAG00000013678) #25 RAB11A (ENSOGAG00000007642) #26 MEGF11 (ENSOGAG00000007644) #27 ENSOGAG00000034665 DIS3L (ENSOGAG00000024086) #28 ENSOGAG00000028488 #29 MAP2K1 (ENSOGAG00000015876) #30 SNAPC5 (ENSOGAG00000015881) #31 ENSOGAG00000015884 #32 ZWILCH (ENSOGAG00000015886) #33 LCTL (ENSOGAG00000015893) #34 SMAD6 (ENSOGAG00000015387) #35 ENSOGAG00000034467 #36 Haplorrhini ANCESTRAL SPECIES 17 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #35 Tarsier MODERN SPECIES 994 DPP8 (ENSTSYG00000013318) #20 HACD3 (ENSTSYG00000005717) #22 INTS14 (ENSTSYG00000005722) #23 SLC24A1 (ENSTSYG00000006765) #24 Simiiformes ANCESTRAL SPECIES 2 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.a.a #32 ENSGT00390000013696 #33 ENSGT00910000147890 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 Catarrhini ANCESTRAL SPECIES 20 ENSGT00910000148680 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.a.a #32 ENSGT00390000013696 #33 ENSGT00910000147890 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 Cercopithecidae ANCESTRAL SPECIES 21 ENSGT00910000148680 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625.c #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.a.a #32 ENSGT00390000013696 #33 ENSGT00910000147890 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 Rhinopithecus ANCESTRAL SPECIES 49 ENSGT00530000063561 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625.c #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.a.a #32 ENSGT00390000013696 #33 ENSGT00910000147890 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 Golden snub-nosed monkey MODERN SPECIES 3011 PIF1 (ENSRROG00000031261) PLEKHO2 (ENSRROG00000037689) ANKDD1A (ENSRROG00000040585) SPG21 (ENSRROG00000001355) #7 MTFMT (ENSRROG00000023835) #8 SLC51B (ENSRROG00000010776) #9 RASL12 (ENSRROG00000040793) #10 UBAP1L (ENSRROG00000012092) #12 ENSRROG00000033371 #13 ENSRROG00000033036 #14 CILP (ENSRROG00000037983) #15 PARP16 (ENSRROG00000043358) #16 IGDCC3 (ENSRROG00000031915) #18 IGDCC4 (ENSRROG00000035002) #19 DPP8 (ENSRROG00000033287) #20 HACD3 (ENSRROG00000025311) #22 INTS14 (ENSRROG00000043135) #23 SLC24A1 (ENSRROG00000037268) #24 DENND4A (ENSRROG00000038960) #25 Black snub-nosed monkey MODERN SPECIES 1519 ENSRBIG00000028588 #14 CILP (ENSRBIG00000004854) #15 PARP16 (ENSRBIG00000040761) #16 IGDCC3 (ENSRBIG00000032739) #18 IGDCC4 (ENSRBIG00000024016) #19 DPP8 (ENSRBIG00000037591) #20 HACD3 (ENSRBIG00000040553) #22 INTS14 (ENSRBIG00000037004) #23 SLC24A1 (ENSRBIG00000029938) #24 DENND4A (ENSRBIG00000043812) #25 RAB11A (ENSRBIG00000035649) #26 MEGF11 (ENSRBIG00000032238) #27 DIS3L (ENSRBIG00000029360) #28 TIPIN (ENSRBIG00000035207) #29 MAP2K1 (ENSRBIG00000031516) #30 SNAPC5 (ENSRBIG00000033556) #31 ENSRBIG00000043139 #32 ZWILCH (ENSRBIG00000043121) #33 ENSRBIG00000038789 LCTL (ENSRBIG00000034724) #34 ENSRBIG00000044058 SMAD6 (ENSRBIG00000039005) #35 Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00910000148680 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625.c #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.a.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b Vervet Monkey MODERN SPECIES 18 PLEKHO2 (ENSCSAG00000012623) ANKDD1A (ENSCSAG00000012637) SPG21 (ENSCSAG00000012649) #7 MTFMT (ENSCSAG00000012690) #8 SLC51B (ENSCSAG00000012708) #9 RASL12 (ENSCSAG00000012718) #10 KBTBD13 (ENSCSAG00000019737) #11 UBAP1L (ENSCSAG00000012725) #12 PDCD7 (ENSCSAG00000012751) #13 CLPX (ENSCSAG00000012812) #14 CILP (ENSCSAG00000012835) #15 PARP16 (ENSCSAG00000012842) #16 IGDCC3 (ENSCSAG00000012887) #18 IGDCC4 (ENSCSAG00000012938) #19 DPP8 (ENSCSAG00000012960) #20 HACD3 (ENSCSAG00000012971) #22 INTS14 (ENSCSAG00000012981) #23 SLC24A1 (ENSCSAG00000013003) #24 DENND4A (ENSCSAG00000013032) #25 RAB11A (ENSCSAG00000013038) #26 MEGF11 (ENSCSAG00000013112) #27 DIS3L (ENSCSAG00000013140) #28 TIPIN (ENSCSAG00000013176) #29 MAP2K1 (ENSCSAG00000013191) #30 SNAPC5 (ENSCSAG00000013199) #31 ENSCSAG00000013205 #32 ZWILCH (ENSCSAG00000013218) #33 LCTL (ENSCSAG00000013237) #34 SMAD6 (ENSCSAG00000013248) #35 ENSCSAG00000013271 ENSCSAG00000019736 Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00910000148680 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625.c #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.a.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b Macaca ANCESTRAL SPECIES 1 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625.c #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.a.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b Pig-tailed macaque MODERN SPECIES 77 PLEKHO2 (ENSMNEG00000033712) ANKDD1A (ENSMNEG00000037506) SPG21 (ENSMNEG00000040418) #7 MTFMT (ENSMNEG00000040880) #8 SLC51B (ENSMNEG00000037631) #9 RASL12 (ENSMNEG00000043863) #10 KBTBD13 (ENSMNEG00000014591) #11 UBAP1L (ENSMNEG00000039075) #12 PDCD7 (ENSMNEG00000033283) #13 ENSMNEG00000030071 #14 CILP (ENSMNEG00000031330) #15 PARP16 (ENSMNEG00000028481) #16 IGDCC3 (ENSMNEG00000043800) #18 IGDCC4 (ENSMNEG00000039603) #19 DPP8 (ENSMNEG00000033598) #20 HACD3 (ENSMNEG00000037877) #22 INTS14 (ENSMNEG00000039516) #23 SLC24A1 (ENSMNEG00000041188) #24 DENND4A (ENSMNEG00000031159) #25 RAB11A (ENSMNEG00000043040) #26 MEGF11 (ENSMNEG00000028540) #27 DIS3L (ENSMNEG00000035066) #28 TIPIN (ENSMNEG00000031947) #29 MAP2K1 (ENSMNEG00000027299) #30 SNAPC5 (ENSMNEG00000032504) #31 ENSMNEG00000027886 #32 ZWILCH (ENSMNEG00000034955) #33 LCTL (ENSMNEG00000002923) #34 ENSMNEG00000031888 SMAD6 (ENSMNEG00000034598) #35 ENSMNEG00000032567 Macaca_a ANCESTRAL SPECIES 2 ENSGT01100000263539.b.b.a.a.a.b.b.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625.c #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.a.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b Rhesus MODERN SPECIES 17 ANKDD1A (ENSMMUG00000010948) ENSMMUG00000051023 ENSMMUG00000049680 SPG21 (ENSMMUG00000010949) #7 MTFMT (ENSMMUG00000061537) #8 SLC51B (ENSMMUG00000049468) #9 RASL12 (ENSMMUG00000004029) #10 KBTBD13 (ENSMMUG00000004028) #11 PDCD7 (ENSMMUG00000006297) #13 CLPX (ENSMMUG00000006714) #14 CILP (ENSMMUG00000009659) #15 PARP16 (ENSMMUG00000005749) #16 IGDCC3 (ENSMMUG00000021783) #18 IGDCC4 (ENSMMUG00000021788) #19 DPP8 (ENSMMUG00000015447) #20 HACD3 (ENSMMUG00000015450) #22 INTS14 (ENSMMUG00000008095) #23 SLC24A1 (ENSMMUG00000022059) #24 DENND4A (ENSMMUG00000022056) #25 RAB11A (ENSMMUG00000008006) #26 MEGF11 (ENSMMUG00000008007) #27 DIS3L (ENSMMUG00000003693) #28 TIPIN (ENSMMUG00000003695) #29 MAP2K1 (ENSMMUG00000016840) #30 SNAPC5 (ENSMMUG00000060148) #31 RPL4 (ENSMMUG00000016844) #32 ZWILCH (ENSMMUG00000029588) #33 LCTL (ENSMMUG00000017447) #34 ENSMMUG00000063378 SMAD6 (ENSMMUG00000019018) #35 ENSMMUG00000057696 Crab-eating macaque MODERN SPECIES 17 SPG21 (ENSMFAG00000034518) #7 MTFMT (ENSMFAG00000000627) #8 SLC51B (ENSMFAG00000003137) #9 RASL12 (ENSMFAG00000040074) #10 UBAP1L (ENSMFAG00000042428) #12 PDCD7 (ENSMFAG00000031997) #13 CLPX (ENSMFAG00000032196) #14 ENSMFAG00000047489 CILP (ENSMFAG00000039594) #15 PARP16 (ENSMFAG00000051640) #16 ENSMFAG00000036137 ENSMFAG00000061482 IGDCC3 (ENSMFAG00000041666) #18 IGDCC4 (ENSMFAG00000031165) #19 DPP8 (ENSMFAG00000043661) #20 HACD3 (ENSMFAG00000032102) #22 INTS14 (ENSMFAG00000031689) #23 SLC24A1 (ENSMFAG00000000105) #24 DENND4A (ENSMFAG00000030601) #25 ENSMFAG00000047947 ENSMFAG00000060677 ENSMFAG00000055472 RAB11A (ENSMFAG00000000699) #26 MEGF11 (ENSMFAG00000038247) #27 DIS3L (ENSMFAG00000035628) #28 TIPIN (ENSMFAG00000031924) #29 MAP2K1 (ENSMFAG00000036522) #30 ENSMFAG00000063036 SNAPC5 (ENSMFAG00000046383) #31 RPL4 (ENSMFAG00000036412) #32 ZWILCH (ENSMFAG00000036529) #33 Cercopithecinae_b ANCESTRAL SPECIES 31 ENSGT00910000148680 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625.c #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.a.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b Olive baboon MODERN SPECIES 17 ENSPANG00000034589 ANKDD1A (ENSPANG00000016757) SPG21 (ENSPANG00000016758) #7 MTFMT (ENSPANG00000016759) #8 SLC51B (ENSPANG00000016744) #9 RASL12 (ENSPANG00000016745) #10 KBTBD13 (ENSPANG00000007309) #11 UBAP1L (ENSPANG00000016746) #12 PDCD7 (ENSPANG00000016743) #13 CLPX (ENSPANG00000016723) #14 CILP (ENSPANG00000016724) #15 PARP16 (ENSPANG00000016725) #16 IGDCC3 (ENSPANG00000016709) #18 IGDCC4 (ENSPANG00000016710) #19 DPP8 (ENSPANG00000016711) #20 HACD3 (ENSPANG00000016698) #22 INTS14 (ENSPANG00000016699) #23 SLC24A1 (ENSPANG00000016700) #24 DENND4A (ENSPANG00000016685) #25 RAB11A (ENSPANG00000016687) #26 MEGF11 (ENSPANG00000016670) #27 ENSPANG00000024144 ENSPANG00000046531 DIS3L (ENSPANG00000016671) #28 TIPIN (ENSPANG00000016672) #29 MAP2K1 (ENSPANG00000016664) #30 SNAPC5 (ENSPANG00000016665) #31 ENSPANG00000016666 #32 ZWILCH (ENSPANG00000016646) #33 LCTL (ENSPANG00000016647) #34 SMAD6 (ENSPANG00000016648) #35 Cercopithecinae_d ANCESTRAL SPECIES 37 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625.c #14 ENSGT00390000008152.B.b #15 ENSGT00910000147481 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.a.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b Sooty mangabey MODERN SPECIES 336 ANKDD1A (ENSCATG00000035001) SPG21 (ENSCATG00000043599) #7 MTFMT (ENSCATG00000024224) #8 SLC51B (ENSCATG00000043736) #9 RASL12 (ENSCATG00000042289) #10 KBTBD13 (ENSCATG00000021610) #11 UBAP1L (ENSCATG00000035325) #12 PDCD7 (ENSCATG00000032985) #13 ENSCATG00000041300 #14 CILP (ENSCATG00000007240) #15 ENSCATG00000031421 PARP16 (ENSCATG00000029968) #16 IGDCC3 (ENSCATG00000041269) #18 IGDCC4 (ENSCATG00000041870) #19 DPP8 (ENSCATG00000037927) #20 HACD3 (ENSCATG00000030252) #22 INTS14 (ENSCATG00000039488) #23 SLC24A1 (ENSCATG00000034684) #24 DENND4A (ENSCATG00000030001) #25 RAB11A (ENSCATG00000034739) #26 MEGF11 (ENSCATG00000032543) #27 DIS3L (ENSCATG00000044661) #28 TIPIN (ENSCATG00000040328) #29 MAP2K1 (ENSCATG00000038127) #30 SNAPC5 (ENSCATG00000029571) #31 ENSCATG00000031544 #32 ZWILCH (ENSCATG00000036836) #33 LCTL (ENSCATG00000033622) #34 ENSCATG00000019079 SMAD6 (ENSCATG00000002013) #35 ENSCATG00000035445 Drill MODERN SPECIES 253 PLEKHO2 (ENSMLEG00000020553) ANKDD1A (ENSMLEG00000027812) SPG21 (ENSMLEG00000039160) #7 MTFMT (ENSMLEG00000012111) #8 SLC51B (ENSMLEG00000026018) #9 RASL12 (ENSMLEG00000043142) #10 KBTBD13 (ENSMLEG00000023512) #11 UBAP1L (ENSMLEG00000037677) #12 ENSMLEG00000029629 #14 CILP (ENSMLEG00000042537) #15 ENSMLEG00000027861 PARP16 (ENSMLEG00000035171) #16 IGDCC3 (ENSMLEG00000038371) #18 IGDCC4 (ENSMLEG00000028139) #19 DPP8 (ENSMLEG00000039474) #20 HACD3 (ENSMLEG00000005763) #22 INTS14 (ENSMLEG00000027622) #23 SLC24A1 (ENSMLEG00000039031) #24 DENND4A (ENSMLEG00000041101) #25 RAB11A (ENSMLEG00000032505) #26 MEGF11 (ENSMLEG00000042443) #27 ENSMLEG00000039621 DIS3L (ENSMLEG00000034558) #28 TIPIN (ENSMLEG00000031419) #29 MAP2K1 (ENSMLEG00000034124) #30 SNAPC5 (ENSMLEG00000044262) #31 ENSMLEG00000043250 #32 ZWILCH (ENSMLEG00000031789) #33 LCTL (ENSMLEG00000011538) #34 ENSMLEG00000036582 ENSMLEG00000039010 Hominoidea ANCESTRAL SPECIES 20 ENSGT00910000148680 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.b #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00860000136046 ENSGT00940000153499.b.b #37 Gibbon MODERN SPECIES 21 ENSNLEG00000031983 ANKDD1A (ENSNLEG00000012524) SPG21 (ENSNLEG00000012567) #7 MTFMT (ENSNLEG00000034733) #8 SLC51B (ENSNLEG00000012610) #9 RASL12 (ENSNLEG00000012613) #10 UBAP1L (ENSNLEG00000012621) #12 PDCD7 (ENSNLEG00000012628) #13 CLPX (ENSNLEG00000012633) #14 CILP (ENSNLEG00000012638) #15 ENSNLEG00000034448 ENSNLEG00000012643 #16 IGDCC3 (ENSNLEG00000012651) #18 IGDCC4 (ENSNLEG00000012668) #19 DPP8 (ENSNLEG00000012689) #20 HACD3 (ENSNLEG00000012725) #22 INTS14 (ENSNLEG00000012745) #23 ENSNLEG00000012767 #24 DENND4A (ENSNLEG00000012772) #25 RAB11A (ENSNLEG00000012853) #26 MEGF11 (ENSNLEG00000012863) #27 DIS3L (ENSNLEG00000012891) #28 TIPIN (ENSNLEG00000012909) #29 MAP2K1 (ENSNLEG00000012913) #30 SNAPC5 (ENSNLEG00000033124) #31 ENSNLEG00000012938 #32 ZWILCH (ENSNLEG00000012950) #33 LCTL (ENSNLEG00000012956) #34 SMAD6 (ENSNLEG00000032864) #35 ENSNLEG00000028836 SMAD3 (ENSNLEG00000012983) #37 Hominidae ANCESTRAL SPECIES 22 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.b #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00860000136046 ENSGT00940000153499.b.b #37 Orangutan MODERN SPECIES 6 PLEKHO2 (ENSPPYG00000006555) ANKDD1A (ENSPPYG00000006556) SPG21 (ENSPPYG00000006557) #7 MTFMT (ENSPPYG00000006558) #8 SLC51B (ENSPPYG00000037628) #9 RASL12 (ENSPPYG00000006560) #10 KBTBD13 (ENSPPYG00000006561) #11 UBAP1L (ENSPPYG00000030696) #12 PDCD7 (ENSPPYG00000006562) #13 CLPX (ENSPPYG00000006563) #14 CILP (ENSPPYG00000006564) #15 PARP16 (ENSPPYG00000006565) #16 IGDCC3 (ENSPPYG00000006566) #18 IGDCC4 (ENSPPYG00000006567) #19 DPP8 (ENSPPYG00000006568) #20 HACD3 (ENSPPYG00000006569) #22 INTS14 (ENSPPYG00000006570) #23 SLC24A1 (ENSPPYG00000006571) #24 DENND4A (ENSPPYG00000006572) #25 RAB11A (ENSPPYG00000006573) #26 MEGF11 (ENSPPYG00000039385) #27 DIS3L (ENSPPYG00000006575) #28 TIPIN (ENSPPYG00000031745) #29 MAP2K1 (ENSPPYG00000006576) #30 ENSPPYG00000032290 SNAPC5 (ENSPPYG00000040277) #31 RPL4 (ENSPPYG00000006578) #32 ZWILCH (ENSPPYG00000006579) #33 LCTL (ENSPPYG00000006580) #34 ENSPPYG00000006581 #35 ENSPPYG00000006582 Homo/Pan/Gorilla group ANCESTRAL SPECIES 22 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.b.a.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00910000147041 ENSGT00860000136046 Homo/Pan group ANCESTRAL SPECIES 21 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.b.a.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00910000147041 ENSGT00860000136046 Pan ANCESTRAL SPECIES 20 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a #29 ENSGT00510000046986.m.a ENSGT00940000153487.b.b.i.a #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.b.a.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00910000147041 Chimpanzee MODERN SPECIES 6 PLEKHO2 (ENSPTRG00000007168) ANKDD1A (ENSPTRG00000007169) SPG21 (ENSPTRG00000007170) #7 MTFMT (ENSPTRG00000007171) #8 SLC51B (ENSPTRG00000007172) #9 RASL12 (ENSPTRG00000007173) #10 KBTBD13 (ENSPTRG00000042018) #11 UBAP1L (ENSPTRG00000039407) #12 PDCD7 (ENSPTRG00000045629) #13 CLPX (ENSPTRG00000007176) #14 CILP (ENSPTRG00000007177) #15 PARP16 (ENSPTRG00000007178) #16 IGDCC3 (ENSPTRG00000007179) #18 IGDCC4 (ENSPTRG00000007180) #19 DPP8 (ENSPTRG00000007182) #20 HACD3 (ENSPTRG00000007183) #22 INTS14 (ENSPTRG00000007184) #23 SLC24A1 (ENSPTRG00000007185) #24 DENND4A (ENSPTRG00000007186) #25 RAB11A (ENSPTRG00000044358) #26 MEGF11 (ENSPTRG00000007189) #27 DIS3L (ENSPTRG00000007191) #28 TIPIN (ENSPTRG00000007192) #29 ENSPTRG00000051889 MAP2K1 (ENSPTRG00000007193) #30 ENSPTRG00000049603 SNAPC5 (ENSPTRG00000007194) #31 RPL4 (ENSPTRG00000007195) #32 ZWILCH (ENSPTRG00000007196) #33 LCTL (ENSPTRG00000007197) #34 SMAD6 (ENSPTRG00000007198) #35 Bonobo MODERN SPECIES 6 PLEKHO2 (ENSPPAG00000021793) ANKDD1A (ENSPPAG00000035127) SPG21 (ENSPPAG00000014442) #7 MTFMT (ENSPPAG00000035142) #8 SLC51B (ENSPPAG00000029986) #9 RASL12 (ENSPPAG00000031385) #10 KBTBD13 (ENSPPAG00000010722) #11 ENSPPAG00000033811 #12 ENSPPAG00000035027 #13 CLPX (ENSPPAG00000040563) #14 CILP (ENSPPAG00000042751) #15 PARP16 (ENSPPAG00000030232) #16 IGDCC3 (ENSPPAG00000042057) #18 IGDCC4 (ENSPPAG00000036548) #19 DPP8 (ENSPPAG00000032419) #20 HACD3 (ENSPPAG00000014660) #22 INTS14 (ENSPPAG00000030391) #23 SLC24A1 (ENSPPAG00000042941) #24 DENND4A (ENSPPAG00000022752) #25 RAB11A (ENSPPAG00000030195) #26 MEGF11 (ENSPPAG00000043580) #27 DIS3L (ENSPPAG00000019888) #28 TIPIN (ENSPPAG00000033427) #29 ENSPPAG00000041842 ENSPPAG00000038145 MAP2K1 (ENSPPAG00000028577) #30 ENSPPAG00000033063 SNAPC5 (ENSPPAG00000041196) #31 ENSPPAG00000035309 #32 ZWILCH (ENSPPAG00000033861) #33 LCTL (ENSPPAG00000040836) #34 Human MODERN SPECIES 6 ENSG00000249240 ANKDD1A (ENSG00000166839) SPG21 (ENSG00000090487) #7 MTFMT (ENSG00000103707) #8 SLC51B (ENSG00000186198) #9 RASL12 (ENSG00000103710) #10 KBTBD13 (ENSG00000234438) #11 UBAP1L (ENSG00000246922) #12 PDCD7 (ENSG00000090470) #13 CLPX (ENSG00000166855) #14 CILP (ENSG00000138615) #15 PARP16 (ENSG00000138617) #16 IGDCC3 (ENSG00000174498) #18 IGDCC4 (ENSG00000103742) #19 DPP8 (ENSG00000074603) #20 HACD3 (ENSG00000074696) #22 INTS14 (ENSG00000138614) #23 SLC24A1 (ENSG00000074621) #24 DENND4A (ENSG00000174485) #25 RAB11A (ENSG00000103769) #26 MEGF11 (ENSG00000157890) #27 DIS3L (ENSG00000166938) #28 TIPIN (ENSG00000075131) #29 MAP2K1 (ENSG00000169032) #30 SNAPC5 (ENSG00000174446) #31 RPL4 (ENSG00000174444) #32 ZWILCH (ENSG00000174442) #33 LCTL (ENSG00000188501) #34 SMAD6 (ENSG00000137834) #35 SMAD3 (ENSG00000166949) #37 AAGAB (ENSG00000103591) Gorilla MODERN SPECIES 6 PIF1 (ENSGGOG00000012347) PLEKHO2 (ENSGGOG00000005801) ANKDD1A (ENSGGOG00000003179) SPG21 (ENSGGOG00000004763) #7 MTFMT (ENSGGOG00000001124) #8 SLC51B (ENSGGOG00000015637) #9 RASL12 (ENSGGOG00000024110) #10 UBAP1L (ENSGGOG00000038121) #12 PDCD7 (ENSGGOG00000005814) #13 CLPX (ENSGGOG00000000326) #14 CILP (ENSGGOG00000042968) #15 PARP16 (ENSGGOG00000022851) #16 IGDCC3 (ENSGGOG00000010452) #18 IGDCC4 (ENSGGOG00000010463) #19 DPP8 (ENSGGOG00000012470) #20 HACD3 (ENSGGOG00000022837) #22 INTS14 (ENSGGOG00000003838) #23 SLC24A1 (ENSGGOG00000016389) #24 DENND4A (ENSGGOG00000014870) #25 ENSGGOG00000022841 RAB11A (ENSGGOG00000014252) #26 MEGF11 (ENSGGOG00000000293) #27 DIS3L (ENSGGOG00000001549) #28 TIPIN (ENSGGOG00000000061) #29 ENSGGOG00000024529 MAP2K1 (ENSGGOG00000003687) #30 ENSGGOG00000042752 SNAPC5 (ENSGGOG00000003693) #31 ENSGGOG00000003695 #32 ZWILCH (ENSGGOG00000003703) #33 LCTL (ENSGGOG00000006350) #34 Platyrrhini ANCESTRAL SPECIES 27 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.g.a.a #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.a.a #32 ENSGT00390000013696 #33 ENSGT00910000147890 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Cebidae ANCESTRAL SPECIES 29 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00940000170330 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.a.a #32 ENSGT00390000013696 #33 ENSGT00910000147890 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Marmoset MODERN SPECIES 1 ENSCJAG00000075564 ANKDD1A (ENSCJAG00000031989) ENSCJAG00000005282 #7 MTFMT (ENSCJAG00000006848) #8 SLC51B (ENSCJAG00000006852) #9 RASL12 (ENSCJAG00000080082) #10 KBTBD13 (ENSCJAG00000023428) #11 UBAP1L (ENSCJAG00000035221) #12 PDCD7 (ENSCJAG00000045698) #13 CLPX (ENSCJAG00000006870) #14 CILP (ENSCJAG00000047691) #15 PARP16 (ENSCJAG00000006929) #16 IGDCC3 (ENSCJAG00000006940) #18 IGDCC4 (ENSCJAG00000006951) #19 DPP8 (ENSCJAG00000006987) #20 HACD3 (ENSCJAG00000007084) #22 INTS14 (ENSCJAG00000007118) #23 SLC24A1 (ENSCJAG00000007180) #24 DENND4A (ENSCJAG00000007209) #25 RAB11A (ENSCJAG00000042037) #26 ENSCJAG00000083582 MEGF11 (ENSCJAG00000007353) #27 DIS3L (ENSCJAG00000007411) #28 ENSCJAG00000085355 MAP2K1 (ENSCJAG00000007460) #30 SNAPC5 (ENSCJAG00000070895) #31 ENSCJAG00000007491 #32 ZWILCH (ENSCJAG00000007524) #33 LCTL (ENSCJAG00000007558) #34 SMAD6 (ENSCJAG00000044644) #35 SMAD3 (ENSCJAG00000002088) #37 Cebidae_a ANCESTRAL SPECIES 39 ENSGT00530000063561 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.cb.a.a.a #32 ENSGT00390000013696 #33 ENSGT00910000147890 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Capuchin MODERN SPECIES 485 MTFMT (ENSCCAG00000018534) #8 SLC51B (ENSCCAG00000031349) #9 RASL12 (ENSCCAG00000037599) #10 ENSCCAG00000019927 UBAP1L (ENSCCAG00000037075) #12 PDCD7 (ENSCCAG00000026810) #13 ENSCCAG00000028918 #14 CILP (ENSCCAG00000021521) #15 PARP16 (ENSCCAG00000032095) #16 IGDCC3 (ENSCCAG00000029122) #18 IGDCC4 (ENSCCAG00000034061) #19 DPP8 (ENSCCAG00000023015) #20 HACD3 (ENSCCAG00000037841) #22 INTS14 (ENSCCAG00000030079) #23 SLC24A1 (ENSCCAG00000024899) #24 DENND4A (ENSCCAG00000036137) #25 ENSCCAG00000032078 RAB11A (ENSCCAG00000021286) #26 MEGF11 (ENSCCAG00000029113) #27 DIS3L (ENSCCAG00000037964) #28 ENSCCAG00000018227 #30 Bolivian squirrel monkey MODERN SPECIES 179 ENSSBOG00000023129 ANKDD1A (ENSSBOG00000006335) SPG21 (ENSSBOG00000021959) #7 MTFMT (ENSSBOG00000024674) #8 SLC51B (ENSSBOG00000023480) #9 RASL12 (ENSSBOG00000032264) #10 UBAP1L (ENSSBOG00000026917) #12 PDCD7 (ENSSBOG00000020378) #13 CLPX (ENSSBOG00000023525) #14 CILP (ENSSBOG00000034310) #15 PARP16 (ENSSBOG00000032698) #16 IGDCC3 (ENSSBOG00000030768) #18 IGDCC4 (ENSSBOG00000027481) #19 ENSSBOG00000019694 DPP8 (ENSSBOG00000031844) #20 HACD3 (ENSSBOG00000025352) #22 INTS14 (ENSSBOG00000033678) #23 SLC24A1 (ENSSBOG00000035560) #24 DENND4A (ENSSBOG00000021504) #25 RAB11A (ENSSBOG00000017326) #26 MEGF11 (ENSSBOG00000026335) #27 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 599 MTFMT (ENSANAG00000030327) #8 SLC51B (ENSANAG00000025993) #9 RASL12 (ENSANAG00000027475) #10 UBAP1L (ENSANAG00000029321) #12 PDCD7 (ENSANAG00000020593) #13 CLPX (ENSANAG00000023812) #14 CILP (ENSANAG00000022242) #15 PARP16 (ENSANAG00000026820) #16 IGDCC3 (ENSANAG00000021787) #18 IGDCC4 (ENSANAG00000026571) #19 DPP8 (ENSANAG00000038141) #20 ENSANAG00000026926 #22 INTS14 (ENSANAG00000038417) #23 SLC24A1 (ENSANAG00000016940) #24 DENND4A (ENSANAG00000037563) #25 RAB11A (ENSANAG00000008429) #26 MEGF11 (ENSANAG00000031211) #27 DIS3L (ENSANAG00000024523) #28 ENSANAG00000030739 #29 MAP2K1 (ENSANAG00000023179) #30 ENSANAG00000023149 #31 ENSANAG00000029866 #32 ZWILCH (ENSANAG00000037776) #33 LCTL (ENSANAG00000029715) #34 ENSANAG00000038383 IL33 (ENSANAG00000019780) ENSANAG00000033312 Mas night monkey MODERN SPECIES 185 ENSANAG00000007809 #22 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #35 Eulipotyphla ANCESTRAL SPECIES 381 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 Common shrew MODERN SPECIES 5577 DPP8 (ENSSARG00000007676) #20 ENSSARG00000007714 #22 INTS14 (ENSSARG00000007722) #23 Hedgehog MODERN SPECIES 7467 ENSEEUG00000014934 #22 INTS14 (ENSEEUG00000015000) #23 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #35 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Suina ANCESTRAL SPECIES 12 ENSGT00390000018044.b.a ENSGT00940000160524 ENSGT00940000156873 ENSGT00940000158002 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Pig MODERN SPECIES MALT1 (ENSSSCG00000004917) ALPK2 (ENSSSCG00000004918) NEDD4L (ENSSSCG00000004919) ATP8B1 (ENSSSCG00000004921) SLC51B (ENSSSCG00000004923) #9 RASL12 (ENSSSCG00000038071) #10 KBTBD13 (ENSSSCG00000035667) #11 UBAP1L (ENSSSCG00000035506) #12 PDCD7 (ENSSSCG00000004926) #13 CLPX (ENSSSCG00000004927) #14 CILP (ENSSSCG00000004928) #15 PARP16 (ENSSSCG00000004929) #16 IGDCC3 (ENSSSCG00000054127) #18 IGDCC4 (ENSSSCG00000004931) #19 DPP8 (ENSSSCG00000004934) #20 HACD3 (ENSSSCG00000004935) #22 INTS14 (ENSSSCG00000004936) #23 SLC24A1 (ENSSSCG00000004937) #24 DENND4A (ENSSSCG00000004938) #25 RAB11A (ENSSSCG00000032312) #26 MEGF11 (ENSSSCG00000004939) #27 DIS3L (ENSSSCG00000004941) #28 TIPIN (ENSSSCG00000004942) #29 MAP2K1 (ENSSSCG00000004943) #30 SNAPC5 (ENSSSCG00000038941) #31 RPL4 (ENSSSCG00000004945) #32 ZWILCH (ENSSSCG00000004946) #33 ENSSSCG00000051767 LCTL (ENSSSCG00000004947) #34 SMAD6 (ENSSSCG00000004948) #35 SMAD3 (ENSSSCG00000004952) #37 Chacoan peccary MODERN SPECIES 786 MALT1 (ENSCWAG00000006556) ALPK2 (ENSCWAG00000006468) NEDD4L (ENSCWAG00000003914) ATP8B1 (ENSCWAG00000003691) SLC51B (ENSCWAG00000019198) #9 RASL12 (ENSCWAG00000019157) #10 KBTBD13 (ENSCWAG00000019145) #11 UBAP1L (ENSCWAG00000019106) #12 PDCD7 (ENSCWAG00000019076) #13 CLPX (ENSCWAG00000019024) #14 CILP (ENSCWAG00000019001) #15 PARP16 (ENSCWAG00000018965) #16 IGDCC3 (ENSCWAG00000018736) #18 IGDCC4 (ENSCWAG00000018683) #19 DPP8 (ENSCWAG00000018161) #20 HACD3 (ENSCWAG00000017975) #22 INTS14 (ENSCWAG00000017595) #23 SLC24A1 (ENSCWAG00000017106) #24 DENND4A (ENSCWAG00000016363) #25 RAB11A (ENSCWAG00000016259) #26 MEGF11 (ENSCWAG00000015726) #27 DIS3L (ENSCWAG00000015597) #28 TIPIN (ENSCWAG00000015560) #29 MAP2K1 (ENSCWAG00000015519) #30 SNAPC5 (ENSCWAG00000015485) #31 RPL4 (ENSCWAG00000015376) #32 ZWILCH (ENSCWAG00000015266) #33 LCTL (ENSCWAG00000015109) #34 SMAD6 (ENSCWAG00000015079) #35 SMAD3 (ENSCWAG00000015026) #37 AAGAB (ENSCWAG00000014993) Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.xc #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Cetacea ANCESTRAL SPECIES 2 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.xc.b #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 Odontoceti ANCESTRAL SPECIES 2 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.xc.b #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 Sperm whale MODERN SPECIES 2 RBPMS2 (ENSPCTG00005012971) ENSPCTG00005013043 SPG21 (ENSPCTG00005013161) #7 MTFMT (ENSPCTG00005013322) #8 SLC51B (ENSPCTG00005013568) #9 RASL12 (ENSPCTG00005013690) #10 KBTBD13 (ENSPCTG00005013835) #11 UBAP1L (ENSPCTG00005013861) #12 PDCD7 (ENSPCTG00005013950) #13 CLPX (ENSPCTG00005014028) #14 CILP (ENSPCTG00005014102) #15 PARP16 (ENSPCTG00005014147) #16 IGDCC3 (ENSPCTG00005014269) #18 IGDCC4 (ENSPCTG00005014441) #19 DPP8 (ENSPCTG00005014761) #20 HACD3 (ENSPCTG00005015026) #22 INTS14 (ENSPCTG00005015317) #23 SLC24A1 (ENSPCTG00005015689) #24 DENND4A (ENSPCTG00005016168) #25 RAB11A (ENSPCTG00005016434) #26 MEGF11 (ENSPCTG00005016590) #27 DIS3L (ENSPCTG00005017408) #28 TIPIN (ENSPCTG00005017493) #29 MAP2K1 (ENSPCTG00005017538) #30 SNAPC5 (ENSPCTG00005017569) #31 ENSPCTG00005017611 #32 ZWILCH (ENSPCTG00005017727) #33 LCTL (ENSPCTG00005017782) #34 ENSPCTG00005018004 SMAD6 (ENSPCTG00005018032) #35 ENSPCTG00005018068 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392.a #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.xc.b #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392.a #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.xc.b #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 Monodontidae ANCESTRAL SPECIES 27 ENSGT00530000063561 ENSGT00530000063760.a ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392.a #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.xc.b #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 Beluga whale MODERN SPECIES 20 PIF1 (ENSDLEG00000008546) PLEKHO2 (ENSDLEG00000008575) SPG21 (ENSDLEG00000008610) #7 MTFMT (ENSDLEG00000008641) #8 SLC51B (ENSDLEG00000008675) #9 RASL12 (ENSDLEG00000008693) #10 KBTBD13 (ENSDLEG00000008734) #11 UBAP1L (ENSDLEG00000008757) #12 PDCD7 (ENSDLEG00000008786) #13 CLPX (ENSDLEG00000008818) #14 CILP (ENSDLEG00000008922) #15 PARP16 (ENSDLEG00000008951) #16 IGDCC3 (ENSDLEG00000009011) #18 IGDCC4 (ENSDLEG00000009168) #19 DPP8 (ENSDLEG00000009245) #20 HACD3 (ENSDLEG00000009324) #22 INTS14 (ENSDLEG00000009368) #23 SLC24A1 (ENSDLEG00000009406) #24 DENND4A (ENSDLEG00000009569) #25 RAB11A (ENSDLEG00000009643) #26 MEGF11 (ENSDLEG00000009720) #27 DIS3L (ENSDLEG00000009982) #28 TIPIN (ENSDLEG00000010313) #29 ENSDLEG00000010343 MAP2K1 (ENSDLEG00000010364) #30 SNAPC5 (ENSDLEG00000010421) #31 RPL4 (ENSDLEG00000010430) #32 ZWILCH (ENSDLEG00000010482) #33 LCTL (ENSDLEG00000010607) #34 ENSDLEG00000010647 ENSDLEG00000010657 Narwhal MODERN SPECIES 308 PIF1 (ENSMMNG00015011099) PLEKHO2 (ENSMMNG00015011123) ENSMMNG00015011156 ENSMMNG00015011175 MTFMT (ENSMMNG00015011203) #8 SLC51B (ENSMMNG00015011224) #9 RASL12 (ENSMMNG00015011250) #10 KBTBD13 (ENSMMNG00015011265) #11 UBAP1L (ENSMMNG00015011279) #12 PDCD7 (ENSMMNG00015006276) #13 CILP (ENSMMNG00015006369) #15 PARP16 (ENSMMNG00015006524) #16 IGDCC3 (ENSMMNG00015006574) #18 IGDCC4 (ENSMMNG00015006606) #19 DPP8 (ENSMMNG00015006705) #20 HACD3 (ENSMMNG00015006843) #22 INTS14 (ENSMMNG00015006934) #23 SLC24A1 (ENSMMNG00015007028) #24 DENND4A (ENSMMNG00015007114) #25 RAB11A (ENSMMNG00015007170) #26 MEGF11 (ENSMMNG00015007280) #27 DIS3L (ENSMMNG00015007393) #28 TIPIN (ENSMMNG00015007474) #29 ENSMMNG00015007536 MAP2K1 (ENSMMNG00015007579) #30 SNAPC5 (ENSMMNG00015007601) #31 ENSMMNG00015007652 #32 ZWILCH (ENSMMNG00015007746) #33 LCTL (ENSMMNG00015007784) #34 ENSMMNG00015007816 SMAD6 (ENSMMNG00015007869) #35 Vaquita MODERN SPECIES 11 PLEKHO2 (ENSPSNG00000003679) ENSPSNG00000003661 SPG21 (ENSPSNG00000003632) #7 MTFMT (ENSPSNG00000003605) #8 SLC51B (ENSPSNG00000003589) #9 RASL12 (ENSPSNG00000003572) #10 KBTBD13 (ENSPSNG00000003554) #11 UBAP1L (ENSPSNG00000003535) #12 PDCD7 (ENSPSNG00000003524) #13 CLPX (ENSPSNG00000003510) #14 CILP (ENSPSNG00000003465) #15 PARP16 (ENSPSNG00000003434) #16 IGDCC3 (ENSPSNG00000003386) #18 IGDCC4 (ENSPSNG00000003316) #19 DPP8 (ENSPSNG00000003202) #20 HACD3 (ENSPSNG00000003119) #22 INTS14 (ENSPSNG00000003047) #23 SLC24A1 (ENSPSNG00000002890) #24 DENND4A (ENSPSNG00000002770) #25 ENSPSNG00000002715 RAB11A (ENSPSNG00000002694) #26 MEGF11 (ENSPSNG00000002539) #27 ENSPSNG00000002464 #28 TIPIN (ENSPSNG00000002436) #29 MAP2K1 (ENSPSNG00000002407) #30 SNAPC5 (ENSPSNG00000002388) #31 ENSPSNG00000002352 #32 ZWILCH (ENSPSNG00000002336) #33 LCTL (ENSPSNG00000002318) #34 ENSPSNG00000002306 SMAD6 (ENSPSNG00000002293) #35 Dolphin MODERN SPECIES 2020 IGDCC3 (ENSTTRG00000011813) #18 IGDCC4 (ENSTTRG00000011838) #19 DPP8 (ENSTTRG00000011856) #20 HACD3 (ENSTTRG00000011863) #22 INTS14 (ENSTTRG00000011869) #23 SLC24A1 (ENSTTRG00000011873) #24 DENND4A (ENSTTRG00000011877) #25 RAB11A (ENSTTRG00000011885) #26 MEGF11 (ENSTTRG00000011888) #27 Blue whale MODERN SPECIES 11 PIF1 (ENSBMSG00010005687) PLEKHO2 (ENSBMSG00010005672) ENSBMSG00010005663 SPG21 (ENSBMSG00010005631) #7 MTFMT (ENSBMSG00010005614) #8 SLC51B (ENSBMSG00010005596) #9 KBTBD13 (ENSBMSG00010005585) #11 UBAP1L (ENSBMSG00010005534) #12 PDCD7 (ENSBMSG00010005492) #13 CLPX (ENSBMSG00010005401) #14 CILP (ENSBMSG00010005283) #15 PARP16 (ENSBMSG00010005241) #16 IGDCC3 (ENSBMSG00010005178) #18 IGDCC4 (ENSBMSG00010005162) #19 DPP8 (ENSBMSG00010004802) #20 HACD3 (ENSBMSG00010004707) #22 INTS14 (ENSBMSG00010004651) #23 SLC24A1 (ENSBMSG00010004497) #24 DENND4A (ENSBMSG00010004402) #25 RAB11A (ENSBMSG00010004363) #26 MEGF11 (ENSBMSG00010004218) #27 DIS3L (ENSBMSG00010004171) #28 ENSBMSG00010004151 #29 ENSBMSG00010004137 MAP2K1 (ENSBMSG00010004109) #30 ENSBMSG00010004081 #31 ENSBMSG00010004041 #32 ZWILCH (ENSBMSG00010004025) #33 LCTL (ENSBMSG00010003979) #34 SMAD6 (ENSBMSG00010003960) #35 SMAD3 (ENSBMSG00010003929) #37 Pecora ANCESTRAL SPECIES 6 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.xc #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Yarkand deer MODERN SPECIES 3 ENSCHYG00000006677 PTGER2 (ENSCHYG00000006703) SPG21 (ENSCHYG00000006758) #7 MTFMT (ENSCHYG00000006870) #8 SLC51B (ENSCHYG00000006898) #9 RASL12 (ENSCHYG00000006929) #10 KBTBD13 (ENSCHYG00000006975) #11 UBAP1L (ENSCHYG00000007000) #12 PDCD7 (ENSCHYG00000007035) #13 CLPX (ENSCHYG00000007103) #14 CILP (ENSCHYG00000007285) #15 ENSCHYG00000007376 #16 IGDCC3 (ENSCHYG00000007443) #18 IGDCC4 (ENSCHYG00000007622) #19 DPP8 (ENSCHYG00000007762) #20 HACD3 (ENSCHYG00000008236) #22 INTS14 (ENSCHYG00000008447) #23 SLC24A1 (ENSCHYG00000008613) #24 DENND4A (ENSCHYG00000008838) #25 ENSCHYG00000009117 ENSCHYG00000009145 #26 MEGF11 (ENSCHYG00000009296) #27 DIS3L (ENSCHYG00000010099) #28 TIPIN (ENSCHYG00000010297) #29 MAP2K1 (ENSCHYG00000010364) #30 ENSCHYG00000010432 SNAPC5 (ENSCHYG00000010450) #31 ENSCHYG00000010506 #32 ZWILCH (ENSCHYG00000010774) #33 LCTL (ENSCHYG00000011283) #34 ENSCHYG00000011323 Percora_a ANCESTRAL SPECIES 8 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.xc #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Bovidae ANCESTRAL SPECIES 7 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.xc #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Bovinae ANCESTRAL SPECIES 33 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.ib #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.xc #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Bos ANCESTRAL SPECIES 31 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.ib #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.xc.e.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Bos_b ANCESTRAL SPECIES 28 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.ib #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.xc.e.a #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Hybrid Bos Indicus MODERN SPECIES 1 TXNDC16 (ENSBIXG00005008420) PTGER2 (ENSBIXG00005008392) SPG21 (ENSBIXG00005008355) #7 MTFMT (ENSBIXG00005008282) #8 SLC51B (ENSBIXG00005008262) #9 RASL12 (ENSBIXG00005008245) #10 KBTBD13 (ENSBIXG00005008220) #11 UBAP1L (ENSBIXG00005008208) #12 PDCD7 (ENSBIXG00005008169) #13 CILP (ENSBIXG00005008107) #15 PARP16 (ENSBIXG00005008021) #16 IGDCC3 (ENSBIXG00005007974) #18 IGDCC4 (ENSBIXG00005007962) #19 DPP8 (ENSBIXG00005007925) #20 DENND4A (ENSBIXG00005007862) #25 HACD3 (ENSBIXG00005029324) #22 INTS14 (ENSBIXG00005029402) #23 SLC24A1 (ENSBIXG00005029443) #24 ENSBIXG00005029457 RAB11A (ENSBIXG00005029469) #26 MEGF11 (ENSBIXG00005029582) #27 DIS3L (ENSBIXG00005029839) #28 TIPIN (ENSBIXG00005029852) #29 ENSBIXG00005029869 #30 SNAPC5 (ENSBIXG00005029881) #31 ENSBIXG00005029889 #32 ZWILCH (ENSBIXG00005029921) #33 LCTL (ENSBIXG00005029961) #34 SMAD6 (ENSBIXG00005030012) #35 SMAD3 (ENSBIXG00005030065) #37 AAGAB (ENSBIXG00005030085) Cow MODERN SPECIES 1 GPR137C (ENSBTAG00000000821) TXNDC16 (ENSBTAG00000010399) PTGER2 (ENSBTAG00000002163) SPG21 (ENSBTAG00000011540) #7 MTFMT (ENSBTAG00000021630) #8 SLC51B (ENSBTAG00000003737) #9 RASL12 (ENSBTAG00000000062) #10 KBTBD13 (ENSBTAG00000017471) #11 UBAP1L (ENSBTAG00000051351) #12 PDCD7 (ENSBTAG00000039658) #13 CLPX (ENSBTAG00000008386) #14 PARP16 (ENSBTAG00000012352) #16 IGDCC3 (ENSBTAG00000008828) #18 IGDCC4 (ENSBTAG00000006440) #19 DPP8 (ENSBTAG00000014807) #20 HACD3 (ENSBTAG00000015155) #22 INTS14 (ENSBTAG00000015158) #23 SLC24A1 (ENSBTAG00000025826) #24 DENND4A (ENSBTAG00000017095) #25 RAB11A (ENSBTAG00000018959) #26 MEGF11 (ENSBTAG00000034140) #27 DIS3L (ENSBTAG00000000371) #28 TIPIN (ENSBTAG00000000372) #29 MAP2K1 (ENSBTAG00000033983) #30 SNAPC5 (ENSBTAG00000005210) #31 RPL4 (ENSBTAG00000005211) #32 ZWILCH (ENSBTAG00000005213) #33 LCTL (ENSBTAG00000005214) #34 ENSBTAG00000050356 SMAD6 (ENSBTAG00000000625) #35 SMAD3 (ENSBTAG00000012599) #37 Bos_a ANCESTRAL SPECIES 26 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.ib #26 ENSGT00940000154914.hb #26 ENSGT00940000165165 ENSGT00940000162492.x ENSGT00950000182841.b.a.a.a.d.b.a.a.a.b ENSGT00940000158538 ENSGT00940000163515 ENSGT00950000182841.b.a.a.a.d.b.a.b ENSGT00530000063186.a ENSGT00390000003231.b ENSGT00940000160244 ENSGT00940000155009.i Domestic yak MODERN SPECIES 2 PTGER2 (ENSBGRG00000004014) SPG21 (ENSBGRG00000003878) #7 MTFMT (ENSBGRG00000003791) #8 SLC51B (ENSBGRG00000003756) #9 RASL12 (ENSBGRG00000003705) #10 KBTBD13 (ENSBGRG00000003675) #11 ENSBGRG00000003640 UBAP1L (ENSBGRG00000003616) #12 PDCD7 (ENSBGRG00000025646) #13 CLPX (ENSBGRG00000025615) #14 CILP (ENSBGRG00000025584) #15 PARP16 (ENSBGRG00000025545) #16 IGDCC3 (ENSBGRG00000025511) #18 IGDCC4 (ENSBGRG00000025454) #19 DPP8 (ENSBGRG00000025360) #20 HACD3 (ENSBGRG00000025307) #22 INTS14 (ENSBGRG00000025180) #23 SLC24A1 (ENSBGRG00000025095) #24 ENSBGRG00000025078 DENND4A (ENSBGRG00000024953) #25 ENSBGRG00000024884 #26 MEGF11 (ENSBGRG00000024819) #27 DIS3L (ENSBGRG00000024760) #28 TIPIN (ENSBGRG00000024730) #29 MAP2K1 (ENSBGRG00000024678) #30 SNAPC5 (ENSBGRG00000024649) #31 ENSBGRG00000024489 #32 ZWILCH (ENSBGRG00000024356) #33 LCTL (ENSBGRG00000024229) #34 SMAD6 (ENSBGRG00000024050) #35 SMAD3 (ENSBGRG00000023965) #37 Wild yak MODERN SPECIES 1147 ENSBMUG00000004055 TXNDC16 (ENSBMUG00000004085) PTGER2 (ENSBMUG00000004113) SPG21 (ENSBMUG00000004643) #7 MTFMT (ENSBMUG00000004677) #8 SLC51B (ENSBMUG00000004707) #9 RASL12 (ENSBMUG00000004727) #10 ENSBMUG00000004737 #11 ENSBMUG00000004770 ENSBMUG00000004785 #13 CILP (ENSBMUG00000004840) #15 PARP16 (ENSBMUG00000004892) #16 IGDCC3 (ENSBMUG00000004930) #18 IGDCC4 (ENSBMUG00000004971) #19 DPP8 (ENSBMUG00000005098) #20 HACD3 (ENSBMUG00000005161) #22 INTS14 (ENSBMUG00000005195) #23 SLC24A1 (ENSBMUG00000005281) #24 DENND4A (ENSBMUG00000005355) #25 RAB11A (ENSBMUG00000005380) #26 MEGF11 (ENSBMUG00000005468) #27 American bison MODERN SPECIES 2972 GPR137C (ENSBBBG00000006657) TXNDC16 (ENSBBBG00000025167) PTGER2 (ENSBBBG00000025180) SPG21 (ENSBBBG00000007770) #7 MTFMT (ENSBBBG00000025276) #8 SLC51B (ENSBBBG00000025287) #9 RASL12 (ENSBBBG00000007855) #10 ENSBBBG00000006712 #11 PDCD7 (ENSBBBG00000007861) #13 CLPX (ENSBBBG00000025450) #14 CILP (ENSBBBG00000025485) #15 PARP16 (ENSBBBG00000009370) #16 IGDCC3 (ENSBBBG00000001479) #18 IGDCC4 (ENSBBBG00000009376) #19 DPP8 (ENSBBBG00000001480) #20 HACD3 (ENSBBBG00000009384) #22 INTS14 (ENSBBBG00000001482) #23 SLC24A1 (ENSBBBG00000009385) #24 DENND4A (ENSBBBG00000009388) #25 ENSBBBG00000001484 #26 MEGF11 (ENSBBBG00000009393) #27 DIS3L (ENSBBBG00000001485) #28 ENSBBBG00000009401 MAP2K1 (ENSBBBG00000009402) #30 SNAPC5 (ENSBBBG00000009405) #31 RPL4 (ENSBBBG00000009410) #32 ZWILCH (ENSBBBG00000007486) #33 LCTL (ENSBBBG00000009415) #34 SMAD6 (ENSBBBG00000001493) #35 SMAD3 (ENSBBBG00000009419) #37 AAGAB (ENSBBBG00000009422) Caprinae ANCESTRAL SPECIES 30 ENSGT00390000006080 ENSGT01050000244902.b.c.a ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.o #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.xc #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Rambouillet Sheep MODERN SPECIES 23 PTGER2 (ENSOARG00020005033) SPG21 (ENSOARG00020005066) #7 MTFMT (ENSOARG00020005121) #8 SLC51B (ENSOARG00020005165) #9 RASL12 (ENSOARG00020005185) #10 KBTBD13 (ENSOARG00020005214) #11 UBAP1L (ENSOARG00020005231) #12 PDCD7 (ENSOARG00020005266) #13 ENSOARG00020005294 CLPX (ENSOARG00020005303) #14 CILP (ENSOARG00020005386) #15 PARP16 (ENSOARG00020005448) #16 IGDCC3 (ENSOARG00020005562) #18 IGDCC4 (ENSOARG00020005613) #19 DPP8 (ENSOARG00020005690) #20 HACD3 (ENSOARG00020005830) #22 INTS14 (ENSOARG00020006021) #23 SLC24A1 (ENSOARG00020006188) #24 DENND4A (ENSOARG00020006221) #25 ENSOARG00020006812 #26 MEGF11 (ENSOARG00020006928) #27 DIS3L (ENSOARG00020007756) #28 TIPIN (ENSOARG00020007825) #29 MAP2K1 (ENSOARG00020007890) #30 SNAPC5 (ENSOARG00020007973) #31 RPL4 (ENSOARG00020008040) #32 ZWILCH (ENSOARG00020008203) #33 LCTL (ENSOARG00020008384) #34 SMAD6 (ENSOARG00020008552) #35 SMAD3 (ENSOARG00020008589) #37 ENSOARG00020008703 Goat MODERN SPECIES 1 TXNDC16 (ENSCHIG00000016034) PTGER2 (ENSCHIG00000026600) SPG21 (ENSCHIG00000008189) #7 MTFMT (ENSCHIG00000015447) #8 SLC51B (ENSCHIG00000026254) #9 RASL12 (ENSCHIG00000011540) #10 KBTBD13 (ENSCHIG00000006594) #11 UBAP1L (ENSCHIG00000019099) #12 PDCD7 (ENSCHIG00000014756) #13 CLPX (ENSCHIG00000023656) #14 CILP (ENSCHIG00000012679) #15 PARP16 (ENSCHIG00000011861) #16 IGDCC3 (ENSCHIG00000013215) #18 IGDCC4 (ENSCHIG00000021302) #19 DPP8 (ENSCHIG00000013527) #20 HACD3 (ENSCHIG00000020855) #22 INTS14 (ENSCHIG00000012971) #23 SLC24A1 (ENSCHIG00000023644) #24 ENSCHIG00000015128 DENND4A (ENSCHIG00000024015) #25 ENSCHIG00000012183 #26 ENSCHIG00000006809 MEGF11 (ENSCHIG00000023140) #27 DIS3L (ENSCHIG00000009744) #28 ENSCHIG00000000481 #29 MAP2K1 (ENSCHIG00000021340) #30 SNAPC5 (ENSCHIG00000011315) #31 RPL4 (ENSCHIG00000012421) #32 ZWILCH (ENSCHIG00000015830) #33 LCTL (ENSCHIG00000017181) #34 SMAD6 (ENSCHIG00000012651) #35 Siberian musk deer MODERN SPECIES 70 ENSMMSG00000019166 SPG21 (ENSMMSG00000019185) #7 MTFMT (ENSMMSG00000019272) #8 SLC51B (ENSMMSG00000019303) #9 RASL12 (ENSMMSG00000019343) #10 KBTBD13 (ENSMMSG00000019390) #11 UBAP1L (ENSMMSG00000019405) #12 PDCD7 (ENSMMSG00000019450) #13 CLPX (ENSMMSG00000019476) #14 CILP (ENSMMSG00000019540) #15 PARP16 (ENSMMSG00000019586) #16 IGDCC3 (ENSMMSG00000000099) #18 IGDCC4 (ENSMMSG00000000147) #19 DPP8 (ENSMMSG00000000258) #20 ENSMMSG00000000445 HACD3 (ENSMMSG00000000485) #22 INTS14 (ENSMMSG00000000581) #23 SLC24A1 (ENSMMSG00000000735) #24 ENSMMSG00000000783 DENND4A (ENSMMSG00000000845) #25 ENSMMSG00000000971 #26 MEGF11 (ENSMMSG00000001023) #27 DIS3L (ENSMMSG00000001148) #28 TIPIN (ENSMMSG00000001178) #29 MAP2K1 (ENSMMSG00000001210) #30 SNAPC5 (ENSMMSG00000001249) #31 ENSMMSG00000001277 #32 ZWILCH (ENSMMSG00000001358) #33 LCTL (ENSMMSG00000001442) #34 SMAD6 (ENSMMSG00000001473) #35 SMAD3 (ENSMMSG00000001493) #37 Camelidae ANCESTRAL SPECIES 83 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147890 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Arabian camel MODERN SPECIES 32 PLEKHO2 (ENSCDRG00005001250) ANKDD1A (ENSCDRG00005001275) SPG21 (ENSCDRG00005001313) #7 MTFMT (ENSCDRG00005001402) #8 SLC51B (ENSCDRG00005001421) #9 RASL12 (ENSCDRG00005001442) #10 ENSCDRG00005001457 #11 ENSCDRG00005001464 #12 PDCD7 (ENSCDRG00005001491) #13 CLPX (ENSCDRG00005001522) #14 CILP (ENSCDRG00005001549) #15 PARP16 (ENSCDRG00005001584) #16 IGDCC3 (ENSCDRG00005001651) #18 IGDCC4 (ENSCDRG00005001726) #19 DPP8 (ENSCDRG00005001839) #20 HACD3 (ENSCDRG00005001929) #22 INTS14 (ENSCDRG00005001994) #23 SLC24A1 (ENSCDRG00005002129) #24 DENND4A (ENSCDRG00005002286) #25 RAB11A (ENSCDRG00005002443) #26 MEGF11 (ENSCDRG00005002479) #27 DIS3L (ENSCDRG00005002526) #28 TIPIN (ENSCDRG00005002562) #29 MAP2K1 (ENSCDRG00005002580) #30 SNAPC5 (ENSCDRG00005002604) #31 ENSCDRG00005002627 #32 ZWILCH (ENSCDRG00005002673) #33 LCTL (ENSCDRG00005002712) #34 ENSCDRG00005002745 ENSCDRG00005002755 #35 SMAD3 (ENSCDRG00005002780) #37 Alpaca MODERN SPECIES 2210 DPP8 (ENSVPAG00000004541) #20 HACD3 (ENSVPAG00000004546) #22 INTS14 (ENSVPAG00000004548) #23 ENSVPAG00000004549 #24 DENND4A (ENSVPAG00000004550) #25 RAB11A (ENSVPAG00000004556) #26 Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 ENSGT00860000136046 Carnivora ANCESTRAL SPECIES ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00860000136046 ENSGT00940000153499.b.b #37 Caniformia ANCESTRAL SPECIES 12 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Caniformia_b ANCESTRAL SPECIES 15 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Mustelinae ANCESTRAL SPECIES 66 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Ferret MODERN SPECIES 228 PIF1 (ENSMPUG00000000549) PLEKHO2 (ENSMPUG00000000547) ANKDD1A (ENSMPUG00000000544) SPG21 (ENSMPUG00000000528) #7 MTFMT (ENSMPUG00000000527) #8 RASL12 (ENSMPUG00000000526) #10 KBTBD13 (ENSMPUG00000019445) #11 UBAP1L (ENSMPUG00000000525) #12 PDCD7 (ENSMPUG00000000523) #13 CLPX (ENSMPUG00000000518) #14 CILP (ENSMPUG00000000506) #15 PARP16 (ENSMPUG00000000505) #16 IGDCC3 (ENSMPUG00000000488) #18 IGDCC4 (ENSMPUG00000000484) #19 DPP8 (ENSMPUG00000000480) #20 HACD3 (ENSMPUG00000000475) #22 INTS14 (ENSMPUG00000000472) #23 SLC24A1 (ENSMPUG00000000468) #24 DENND4A (ENSMPUG00000000388) #25 RAB11A (ENSMPUG00000000387) #26 MEGF11 (ENSMPUG00000000383) #27 DIS3L (ENSMPUG00000000378) #28 TIPIN (ENSMPUG00000000365) #29 MAP2K1 (ENSMPUG00000000363) #30 SNAPC5 (ENSMPUG00000000356) #31 ENSMPUG00000000337 #32 ZWILCH (ENSMPUG00000000333) #33 LCTL (ENSMPUG00000000312) #34 ENSMPUG00000000309 SMAD6 (ENSMPUG00000000307) #35 SMAD3 (ENSMPUG00000000304) #37 American mink MODERN SPECIES 46 ANKDD1A (ENSNVIG00000017875) SPG21 (ENSNVIG00000017776) #7 MTFMT (ENSNVIG00000017747) #8 SLC51B (ENSNVIG00000017732) #9 RASL12 (ENSNVIG00000017710) #10 KBTBD13 (ENSNVIG00000017694) #11 UBAP1L (ENSNVIG00000017675) #12 PDCD7 (ENSNVIG00000017665) #13 CLPX (ENSNVIG00000017631) #14 CILP (ENSNVIG00000017597) #15 PARP16 (ENSNVIG00000017580) #16 ENSNVIG00000017573 IGDCC3 (ENSNVIG00000017539) #18 IGDCC4 (ENSNVIG00000017489) #19 DPP8 (ENSNVIG00000017340) #20 HACD3 (ENSNVIG00000017259) #22 CO044 (ENSNVIG00000017199) #23 SLC24A1 (ENSNVIG00000017089) #24 DENND4A (ENSNVIG00000016862) #25 RAB11A (ENSNVIG00000016821) #26 MEGF11 (ENSNVIG00000016583) #27 DIS3L (ENSNVIG00000016535) #28 TIPIN (ENSNVIG00000016513) #29 MAP2K1 (ENSNVIG00000016498) #30 SNAPC5 (ENSNVIG00000016483) #31 RPL4 (ENSNVIG00000016412) #32 ZWILC (ENSNVIG00000016326) #33 LCTL (ENSNVIG00000016282) #34 SMAD6 (ENSNVIG00000016271) #35 SMAD3 (ENSNVIG00000016249) #37 AAGAB (ENSNVIG00000016212) Ursidae ANCESTRAL SPECIES 21 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B.p #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Ursus ANCESTRAL SPECIES 37 ENSGT00530000063561 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B.p #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Polar bear MODERN SPECIES 320 OAZ2 (ENSUMAG00000012619) RBPMS2 (ENSUMAG00000012614) PIF1 (ENSUMAG00000012605) PLEKHO2 (ENSUMAG00000012599) SPG21 (ENSUMAG00000012587) #7 MTFMT (ENSUMAG00000012561) #8 SLC51B (ENSUMAG00000012546) #9 RASL12 (ENSUMAG00000012538) #10 ENSUMAG00000012533 #11 CLPX (ENSUMAG00000012513) #14 CILP (ENSUMAG00000012508) #15 PARP16 (ENSUMAG00000012504) #16 IGDCC3 (ENSUMAG00000012461) #18 ENSUMAG00000012451 #19 DPP8 (ENSUMAG00000012441) #20 HACD3 (ENSUMAG00000012379) #22 INTS14 (ENSUMAG00000012368) #23 SLC24A1 (ENSUMAG00000012325) #24 DENND4A (ENSUMAG00000012290) #25 RAB11A (ENSUMAG00000012273) #26 MEGF11 (ENSUMAG00000012242) #27 DIS3L (ENSUMAG00000012227) #28 TIPIN (ENSUMAG00000012215) #29 MAP2K1 (ENSUMAG00000012208) #30 RPL4 (ENSUMAG00000012178) #32 ZWILCH (ENSUMAG00000012145) #33 LCTL (ENSUMAG00000012072) #34 ENSUMAG00000012057 #37 AAGAB (ENSUMAG00000012048) IQCH (ENSUMAG00000012020) C15orf61 (ENSUMAG00000012016) American black bear MODERN SPECIES 4975 HACD3 (ENSUAMG00000019602) #22 INTS14 (ENSUAMG00000019601) #23 SLC24A1 (ENSUAMG00000019598) #24 ENSUAMG00000019405 #25 Giant Panda MODERN SPECIES 15 PLEKHO2 (ENSAMEG00000029578) ANKDD1A (ENSAMEG00000002723) SPG21 (ENSAMEG00000002738) #7 MTFMT (ENSAMEG00000002756) #8 ENSAMEG00000002772 #9 RASL12 (ENSAMEG00000029508) #10 KBTBD13 (ENSAMEG00000025813) #11 UBAP1L (ENSAMEG00000030738) #12 PDCD7 (ENSAMEG00000027984) #13 CLPX (ENSAMEG00000002810) #14 CILP (ENSAMEG00000002854) #15 PARP16 (ENSAMEG00000002861) #16 IGDCC3 (ENSAMEG00000002876) #18 IGDCC4 (ENSAMEG00000002889) #19 DPP8 (ENSAMEG00000002924) #20 HACD3 (ENSAMEG00000002983) #22 INTS14 (ENSAMEG00000003002) #23 SLC24A1 (ENSAMEG00000003029) #24 DENND4A (ENSAMEG00000003046) #25 RAB11A (ENSAMEG00000003119) #26 MEGF11 (ENSAMEG00000003131) #27 DIS3L (ENSAMEG00000003166) #28 TIPIN (ENSAMEG00000027725) #29 MAP2K1 (ENSAMEG00000003218) #30 SNAPC5 (ENSAMEG00000003249) #31 ENSAMEG00000029170 #32 ZWILCH (ENSAMEG00000003251) #33 LCTL (ENSAMEG00000003300) #34 SMAD6 (ENSAMEG00000029979) #35 SMAD3 (ENSAMEG00000003318) #37 AAGAB (ENSAMEG00000028433) Canidae ANCESTRAL SPECIES 15 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167.q #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00950000185603 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Canis_lupus ANCESTRAL SPECIES 17 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167.q #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145.lc.a #32 ENSGT00390000013696 #33 ENSGT00950000185603 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Dog MODERN SPECIES 23 PLEKHO2 (ENSCAFG00845023843) ANKDD1A (ENSCAFG00845023984) SPG21 (ENSCAFG00845024150) #7 MTFMT (ENSCAFG00845024367) #8 SLC51B (ENSCAFG00845024623) #9 KBTBD13 (ENSCAFG00845024657) #11 PDCD7 (ENSCAFG00845024725) #13 UBAP1L (ENSCAFG00845024876) #12 CLPX (ENSCAFG00845024932) #14 CILP (ENSCAFG00845025013) #15 AVPI1 (ENSCAFG00845025073) PARP16 (ENSCAFG00845025116) #16 IGDCC3 (ENSCAFG00845025254) #18 IGDCC4 (ENSCAFG00845025408) #19 DPP8 (ENSCAFG00845025611) #20 HACD3 (ENSCAFG00845025953) #22 INTS14 (ENSCAFG00845026081) #23 SLC24A1 (ENSCAFG00845026323) #24 DENND4A (ENSCAFG00845026536) #25 RAB11A (ENSCAFG00845027320) #26 ENSCAFG00845014976 #27 DIS3L (ENSCAFG00845015076) #28 TIPIN (ENSCAFG00845015229) #29 ENSCAFG00845015268 MAP2K1 (ENSCAFG00845015371) #30 SNAPC5 (ENSCAFG00845015512) #31 RPL4 (ENSCAFG00845015609) #32 ZWILCH (ENSCAFG00845015845) #33 ENSCAFG00845016122 LCTL (ENSCAFG00845016168) #34 SMAD6 (ENSCAFG00845016415) #35 Dingo MODERN SPECIES 205 ANKDD1A (ENSCAFG00020008860) SPG21 (ENSCAFG00020008856) #7 MTFMT (ENSCAFG00020008826) #8 SLC51B (ENSCAFG00020008823) #9 ENSCAFG00020008821 #10 KBTBD13 (ENSCAFG00020008818) #11 UBAP1L (ENSCAFG00020008809) #12 PDCD7 (ENSCAFG00020008800) #13 CLPX (ENSCAFG00020008792) #14 CILP (ENSCAFG00020008785) #15 ENSCAFG00020008780 PARP16 (ENSCAFG00020008773) #16 IGDCC3 (ENSCAFG00020008743) #18 IGDCC4 (ENSCAFG00020008701) #19 DPP8 (ENSCAFG00020008685) #20 HACD3 (ENSCAFG00020008678) #22 INTS14 (ENSCAFG00020008669) #23 SLC24A1 (ENSCAFG00020008562) #24 DENND4A (ENSCAFG00020008501) #25 RAB11A (ENSCAFG00020008478) #26 MEGF11 (ENSCAFG00020008443) #27 DIS3L (ENSCAFG00020008413) #28 TIPIN (ENSCAFG00020008398) #29 MAP2K1 (ENSCAFG00020008392) #30 SNAPC5 (ENSCAFG00020008387) #31 ENSCAFG00020008355 #32 ZWILCH (ENSCAFG00020008215) #33 LCTL (ENSCAFG00020008195) #34 SMAD6 (ENSCAFG00020008193) #35 SMAD3 (ENSCAFG00020008177) #37 ENSCAFG00020008170 Red fox MODERN SPECIES ENSVVUG00000013805 PLEKHO2 (ENSVVUG00000013810) ANKDD1A (ENSVVUG00000013820) SPG21 (ENSVVUG00000013822) #7 MTFMT (ENSVVUG00000013827) #8 SLC51B (ENSVVUG00000013831) #9 RASL12 (ENSVVUG00000013838) #10 ENSVVUG00000013847 #11 PDCD7 (ENSVVUG00000013851) #13 CLPX (ENSVVUG00000013882) #14 CILP (ENSVVUG00000014204) #15 PARP16 (ENSVVUG00000014214) #16 IGDCC3 (ENSVVUG00000014224) #18 IGDCC4 (ENSVVUG00000014242) #19 DPP8 (ENSVVUG00000014284) #20 HACD3 (ENSVVUG00000014290) #22 INTS14 (ENSVVUG00000014296) #23 SLC24A1 (ENSVVUG00000014313) #24 DENND4A (ENSVVUG00000014392) #25 RAB11A (ENSVVUG00000014435) #26 MEGF11 (ENSVVUG00000014448) #27 DIS3L (ENSVVUG00000014492) #28 TIPIN (ENSVVUG00000014501) #29 MAP2K1 (ENSVVUG00000014514) #30 SNAPC5 (ENSVVUG00000014527) #31 ENSVVUG00000014531 #32 ZWILCH (ENSVVUG00000014559) #33 ENSVVUG00000014578 LCTL (ENSVVUG00000014585) #34 ENSVVUG00000014612 ENSVVUG00000014615 Felidae ANCESTRAL SPECIES 1 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00860000136046 ENSGT00940000153499.b.b #37 Panthera ANCESTRAL SPECIES 3 ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00860000136046 ENSGT00940000153499.b.b #37 Panthera_a ANCESTRAL SPECIES 15 ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00860000136046 ENSGT00940000153499.b.b #37 leopard MODERN SPECIES 7 ANKDD1A (ENSPPRG00000021337) SPG21 (ENSPPRG00000024485) #7 MTFMT (ENSPPRG00000024322) #8 SLC51B (ENSPPRG00000024145) #9 RASL12 (ENSPPRG00000024033) #10 KBTBD13 (ENSPPRG00000014815) #11 UBAP1L (ENSPPRG00000023664) #12 PDCD7 (ENSPPRG00000023540) #13 CLPX (ENSPPRG00000023475) #14 CILP (ENSPPRG00000023132) #15 PARP16 (ENSPPRG00000022890) #16 IGDCC3 (ENSPPRG00000022706) #18 IGDCC4 (ENSPPRG00000000219) #19 DPP8 (ENSPPRG00000001353) #20 ENSPPRG00000001945 HACD3 (ENSPPRG00000003107) #22 INTS14 (ENSPPRG00000003935) #23 SLC24A1 (ENSPPRG00000006682) #24 DENND4A (ENSPPRG00000009637) #25 RAB11A (ENSPPRG00000010471) #26 MEGF11 (ENSPPRG00000014069) #27 DIS3L (ENSPPRG00000019912) #28 TIPIN (ENSPPRG00000022554) #29 MAP2K1 (ENSPPRG00000022608) #30 SNAPC5 (ENSPPRG00000000465) #31 ENSPPRG00000000610 #32 ZWILCH (ENSPPRG00000001390) #33 LCTL (ENSPPRG00000002315) #34 SMAD6 (ENSPPRG00000002502) #35 SMAD3 (ENSPPRG00000003306) #37 AAGAB (ENSPPRG00000003564) lion MODERN SPECIES 6 ANKDD1A (ENSPLOG00000011255) SPG21 (ENSPLOG00000011106) #7 MTFMT (ENSPLOG00000011004) #8 SLC51B (ENSPLOG00000010972) #9 RASL12 (ENSPLOG00000010906) #10 KBTBD13 (ENSPLOG00000010867) #11 UBAP1L (ENSPLOG00000010817) #12 PDCD7 (ENSPLOG00000010782) #13 CLPX (ENSPLOG00000010665) #14 CILP (ENSPLOG00000010583) #15 PARP16 (ENSPLOG00000010532) #16 IGDCC3 (ENSPLOG00000010421) #18 IGDCC4 (ENSPLOG00000010305) #19 DPP8 (ENSPLOG00000010171) #20 ENSPLOG00000010122 HACD3 (ENSPLOG00000009943) #22 INTS14 (ENSPLOG00000009755) #23 SLC24A1 (ENSPLOG00000009464) #24 DENND4A (ENSPLOG00000008717) #25 RAB11A (ENSPLOG00000008488) #26 MEGF11 (ENSPLOG00000008100) #27 DIS3L (ENSPLOG00000007929) #28 TIPIN (ENSPLOG00000007894) #29 MAP2K1 (ENSPLOG00000007836) #30 SNAPC5 (ENSPLOG00000007792) #31 RPL4 (ENSPLOG00000007707) #32 ZWILCH (ENSPLOG00000007600) #33 LCTL (ENSPLOG00000007528) #34 SMAD6 (ENSPLOG00000007495) #35 ENSPLOG00000007093 SMAD3 (ENSPLOG00000007068) #37 Tiger MODERN SPECIES 204 PLEKHO2 (ENSPTIG00000020432) ANKDD1A (ENSPTIG00000020864) SPG21 (ENSPTIG00000021286) #7 MTFMT (ENSPTIG00000021473) #8 SLC51B (ENSPTIG00000021613) #9 RASL12 (ENSPTIG00000021753) #10 ENSPTIG00000005399 #11 UBAP1L (ENSPTIG00000021877) #12 CLPX (ENSPTIG00000022022) #14 CILP (ENSPTIG00000001633) #15 PARP16 (ENSPTIG00000004433) #16 IGDCC3 (ENSPTIG00000005842) #18 IGDCC4 (ENSPTIG00000006772) #19 DPP8 (ENSPTIG00000008731) #20 ENSPTIG00000012013 HACD3 (ENSPTIG00000012698) #22 INTS14 (ENSPTIG00000014987) #23 SLC24A1 (ENSPTIG00000017335) #24 DENND4A (ENSPTIG00000018874) #25 RAB11A (ENSPTIG00000021637) #26 MEGF11 (ENSPTIG00000001273) #27 DIS3L (ENSPTIG00000009042) #28 ENSPTIG00000009826 MAP2K1 (ENSPTIG00000010070) #30 SNAPC5 (ENSPTIG00000010493) #31 ENSPTIG00000010784 #32 ZWILCH (ENSPTIG00000011456) #33 LCTL (ENSPTIG00000012036) #34 SMAD3 (ENSPTIG00000012606) #37 AAGAB (ENSPTIG00000013747) IQCH (ENSPTIG00000014096) Cat MODERN SPECIES 237 PLEKHO2 (ENSFCAG00000040159) ANKDD1A (ENSFCAG00000011452) SPG21 (ENSFCAG00000011454) #7 MTFMT (ENSFCAG00000011455) #8 SLC51B (ENSFCAG00000026998) #9 RASL12 (ENSFCAG00000011458) #10 KBTBD13 (ENSFCAG00000030165) #11 UBAP1L (ENSFCAG00000044872) #12 PDCD7 (ENSFCAG00000040312) #13 CLPX (ENSFCAG00000026710) #14 CILP (ENSFCAG00000011462) #15 PARP16 (ENSFCAG00000011463) #16 IGDCC3 (ENSFCAG00000011465) #18 IGDCC4 (ENSFCAG00000011466) #19 DPP8 (ENSFCAG00000025415) #20 HACD3 (ENSFCAG00000008691) #22 INTS14 (ENSFCAG00000008692) #23 SLC24A1 (ENSFCAG00000008693) #24 DENND4A (ENSFCAG00000008694) #25 RAB11A (ENSFCAG00000030174) #26 MEGF11 (ENSFCAG00000003091) #27 DIS3L (ENSFCAG00000029869) #28 TIPIN (ENSFCAG00000035191) #29 MAP2K1 (ENSFCAG00000028389) #30 SNAPC5 (ENSFCAG00000012291) #31 RPL4 (ENSFCAG00000012293) #32 ZWILCH (ENSFCAG00000012294) #33 LCTL (ENSFCAG00000012298) #34 SMAD6 (ENSFCAG00000012300) #35 SMAD3 (ENSFCAG00000027081) #37 AAGAB (ENSFCAG00000004418) Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.db.a #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Chiroptera ANCESTRAL SPECIES 17 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.db.a #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Microchiroptera ANCESTRAL SPECIES 20 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.db.a #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00910000147041 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 Microbat DUPLICATION Microbat MODERN SPECIES 1052 SPG21 (ENSMLUG00000016404) #7 MTFMT (ENSMLUG00000016414) #8 SLC51B (ENSMLUG00000016432) #9 RASL12 (ENSMLUG00000016438) #10 KBTBD13 (ENSMLUG00000029350) #11 PDCD7 (ENSMLUG00000030414) #13 CLPX (ENSMLUG00000008769) #14 CILP (ENSMLUG00000008793) #15 ENSMLUG00000008817 #16 ENSMLUG00000008591 ENSMLUG00000028492 ENSMLUG00000028574 IGDCC3 (ENSMLUG00000000621) #18 IGDCC4 (ENSMLUG00000000632) #19 DPP8 (ENSMLUG00000009434) #20 ENSMLUG00000015087 #22 INTS14 (ENSMLUG00000015095) #23 SLC24A1 (ENSMLUG00000015104) #24 DENND4A (ENSMLUG00000015110) #25 ENSMLUG00000008820 #26 MEGF11 (ENSMLUG00000008226) #27 ENSMLUG00000022949 #28 MAP2K1 (ENSMLUG00000011790) #30 SNAPC5 (ENSMLUG00000011803) #31 ENSMLUG00000011809 #32 ZWILCH (ENSMLUG00000011819) #33 LCTL (ENSMLUG00000011849) #34 Microbat MODERN SPECIES 1257 TM9SF2 (ENSMLUG00000005464) UBAC2 (ENSMLUG00000001242) GPR183 (ENSMLUG00000001245) GPR18 (ENSMLUG00000017014) ENSMLUG00000029636 #22 ENSMLUG00000024254 DOCK9 (ENSMLUG00000014111) SLC15A1 (ENSMLUG00000000006) ENSMLUG00000023148 STK24 (ENSMLUG00000012880) FARP1 (ENSMLUG00000012869) Greater horseshoe bat MODERN SPECIES 24 PLEKHO2 (ENSRFEG00010008395) ANKDD1A (ENSRFEG00010008103) SPG21 (ENSRFEG00010007949) #7 MTFMT (ENSRFEG00010007904) #8 SLC51B (ENSRFEG00010007859) #9 RASL12 (ENSRFEG00010007809) #10 KBTBD13 (ENSRFEG00010007789) #11 UBAP1L (ENSRFEG00010007722) #12 PDCD7 (ENSRFEG00010007642) #13 CLPX (ENSRFEG00010007597) #14 CILP (ENSRFEG00010007498) #15 PARP16 (ENSRFEG00010007410) #16 IGDCC3 (ENSRFEG00010007254) #18 IGDCC4 (ENSRFEG00010007212) #19 DPP8 (ENSRFEG00010007043) #20 HACD3 (ENSRFEG00010004527) #22 INTS14 (ENSRFEG00010004454) #23 SLC24A1 (ENSRFEG00010004368) #24 DENND4A (ENSRFEG00010004242) #25 ENSRFEG00010004168 #26 MEGF11 (ENSRFEG00010004126) #27 DIS3L (ENSRFEG00010004058) #28 TIPIN (ENSRFEG00010004026) #29 MAP2K1 (ENSRFEG00010004010) #30 SNAPC5 (ENSRFEG00010003999) #31 ENSRFEG00010003980 #32 ZWILCH (ENSRFEG00010003952) #33 LCTL (ENSRFEG00010003917) #34 ENSRFEG00010003900 SMAD6 (ENSRFEG00010003887) #35 SMAD3 (ENSRFEG00010003872) #37 Megabat MODERN SPECIES 2040 CLPX (ENSPVAG00000004858) #14 CILP (ENSPVAG00000004867) #15 PARP16 (ENSPVAG00000004875) #16 IGDCC3 (ENSPVAG00000004879) #18 IGDCC4 (ENSPVAG00000004888) #19 DPP8 (ENSPVAG00000004890) #20 HACD3 (ENSPVAG00000004891) #22 INTS14 (ENSPVAG00000004892) #23 SLC24A1 (ENSPVAG00000004893) #24 DENND4A (ENSPVAG00000004894) #25 RAB11A (ENSPVAG00000004909) #26 MEGF11 (ENSPVAG00000004914) #27 DIS3L (ENSPVAG00000004927) #28 TIPIN (ENSPVAG00000004933) #29 Equus ANCESTRAL SPECIES 4 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914.eb #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Horse MODERN SPECIES PLEKHO2 (ENSECAG00000022172) ANKDD1A (ENSECAG00000017284) SPG21 (ENSECAG00000012886) #7 MTFMT (ENSECAG00000012255) #8 SLC51B (ENSECAG00000012241) #9 RASL12 (ENSECAG00000009263) #10 KBTBD13 (ENSECAG00000003990) #11 UBAP1L (ENSECAG00000033711) #12 PDCD7 (ENSECAG00000026989) #13 CLPX (ENSECAG00000016127) #14 CILP (ENSECAG00000014515) #15 PARP16 (ENSECAG00000011251) #16 IGDCC3 (ENSECAG00000024763) #18 IGDCC4 (ENSECAG00000024668) #19 DPP8 (ENSECAG00000010846) #20 HACD3 (ENSECAG00000023082) #22 INTS14 (ENSECAG00000018884) #23 SLC24A1 (ENSECAG00000013327) #24 DENND4A (ENSECAG00000024306) #25 RAB11A (ENSECAG00000023865) #26 MEGF11 (ENSECAG00000000706) #27 DIS3L (ENSECAG00000007302) #28 TIPIN (ENSECAG00000004590) #29 MAP2K1 (ENSECAG00000010640) #30 RPL4 (ENSECAG00000023179) #32 ZWILCH (ENSECAG00000018367) #33 LCTL (ENSECAG00000014254) #34 SMAD6 (ENSECAG00000013706) #35 SMAD3 (ENSECAG00000020259) #37 ENSECAG00000047849 AAGAB (ENSECAG00000013142) Donkey MODERN SPECIES 11 PLEKHO2 (ENSEASG00005033707) ANKDD1A (ENSEASG00005006509) SPG21 (ENSEASG00005006508) #7 MTFMT (ENSEASG00005006503) #8 SLC51B (ENSEASG00005029917) #9 RASL12 (ENSEASG00005006494) #10 KBTBD13 (ENSEASG00005036296) #11 UBAP1L (ENSEASG00005006489) #12 PDCD7 (ENSEASG00005006486) #13 CLPX (ENSEASG00005006483) #14 CILP (ENSEASG00005006479) #15 PARP16 (ENSEASG00005030198) #16 IGDCC3 (ENSEASG00005006470) #18 IGDCC4 (ENSEASG00005006466) #19 DPP8 (ENSEASG00005006459) #20 HACD3 (ENSEASG00005006456) #22 INTS14 (ENSEASG00005006454) #23 SLC24A1 (ENSEASG00005006448) #24 DENND4A (ENSEASG00005006437) #25 RAB11A (ENSEASG00005006431) #26 MEGF11 (ENSEASG00005006429) #27 DIS3L (ENSEASG00005006407) #28 TIPIN (ENSEASG00005006396) #29 MAP2K1 (ENSEASG00005006387) #30 SNAPC5 (ENSEASG00005006384) #31 RPL4 (ENSEASG00005006373) #32 ZWILCH (ENSEASG00005006339) #33 LCTL (ENSEASG00005006319) #34 ENSEASG00005025450 #35 SMAD3 (ENSEASG00005006315) #37 AAGAB (ENSEASG00005006311) Atlantogenata ANCESTRAL SPECIES 2 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Xenarthra ANCESTRAL SPECIES 230 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 Armadillo MODERN SPECIES 984 IGDCC4 (ENSDNOG00000015741) #19 DPP8 (ENSDNOG00000001444) #20 HACD3 (ENSDNOG00000001687) #22 INTS14 (ENSDNOG00000001690) #23 SLC24A1 (ENSDNOG00000000816) #24 DENND4A (ENSDNOG00000019872) #25 ENSDNOG00000038479 #26 MEGF11 (ENSDNOG00000016951) #27 DIS3L (ENSDNOG00000016967) #28 TIPIN (ENSDNOG00000003177) #29 MAP2K1 (ENSDNOG00000016563) #30 ENSDNOG00000006689 #31 ENSDNOG00000006693 #32 ZWILCH (ENSDNOG00000006711) #33 LCTL (ENSDNOG00000006740) #34 SMAD6 (ENSDNOG00000008227) #35 Sloth MODERN SPECIES 6971 HACD3 (ENSCHOG00000009948) #22 INTS14 (ENSCHOG00000009962) #23 Afrotheria ANCESTRAL SPECIES 58 ENSGT00530000063561 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Tenrec MODERN SPECIES 6878 HACD3 (ENSETEG00000007887) #22 INTS14 (ENSETEG00000007891) #23 SLC24A1 (ENSETEG00000007893) #24 Afrotheria_a ANCESTRAL SPECIES 56 ENSGT00530000063561 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Elephant MODERN SPECIES 466 PIF1 (ENSLAFG00000023289) PLEKHO2 (ENSLAFG00000001775) ANKDD1A (ENSLAFG00000002637) SPG21 (ENSLAFG00000002639) #7 MTFMT (ENSLAFG00000006985) #8 SLC51B (ENSLAFG00000030011) #9 RASL12 (ENSLAFG00000006982) #10 KBTBD13 (ENSLAFG00000031048) #11 PDCD7 (ENSLAFG00000004977) #13 CLPX (ENSLAFG00000004978) #14 CILP (ENSLAFG00000005873) #15 PARP16 (ENSLAFG00000014938) #16 IGDCC3 (ENSLAFG00000000244) #18 IGDCC4 (ENSLAFG00000022955) #19 DPP8 (ENSLAFG00000013000) #20 HACD3 (ENSLAFG00000010226) #22 INTS14 (ENSLAFG00000010235) #23 DENND4A (ENSLAFG00000010247) #25 RAB11A (ENSLAFG00000011418) #26 MEGF11 (ENSLAFG00000011424) #27 DIS3L (ENSLAFG00000006866) #28 TIPIN (ENSLAFG00000026016) #29 MAP2K1 (ENSLAFG00000006487) #30 SNAPC5 (ENSLAFG00000006491) #31 RPL4 (ENSLAFG00000006494) #32 LCTL (ENSLAFG00000012306) #34 SMAD6 (ENSLAFG00000013285) #35 SMAD3 (ENSLAFG00000021903) #37 AAGAB (ENSLAFG00000022590) IQCH (ENSLAFG00000011381) C15orf61 (ENSLAFG00000000737) Hyrax MODERN SPECIES 5734 IGDCC3 (ENSPCAG00000003153) #18 ENSPCAG00000003257 #19 DPP8 (ENSPCAG00000003339) #20 HACD3 (ENSPCAG00000003430) #22 INTS14 (ENSPCAG00000003481) #23 Marsupialia ANCESTRAL SPECIES ENSGT00390000007209.l ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Marsupialia_b ANCESTRAL SPECIES ENSGT00390000007209.l ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Diprotodontia ANCESTRAL SPECIES ENSGT00390000007209.l ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Diprotodontia_a ANCESTRAL SPECIES 1 ENSGT00390000007209.l ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017828 #8 ENSGT00390000010409 #9 ENSGT00940000160167 #10 ENSGT00940000161629 #11 ENSGT00390000008092.b #12 ENSGT00390000017392 #13 ENSGT00390000017625 #14 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 koala MODERN SPECIES PIF1 (ENSPCIG00000029446) PLEKHO2 (ENSPCIG00000029445) ENSPCIG00000029444 ANKDD1A (ENSPCIG00000032384) SPG21 (ENSPCIG00000024124) #7 MTFMT (ENSPCIG00000024121) #8 ENSPCIG00000024118 #9 RASL12 (ENSPCIG00000035910) #10 UBAP1L (ENSPCIG00000024116) #12 PDCD7 (ENSPCIG00000024115) #13 CLPX (ENSPCIG00000024113) #14 CILP (ENSPCIG00000024111) #15 PARP16 (ENSPCIG00000024110) #16 IGDCC4 (ENSPCIG00000024106) #19 DPP8 (ENSPCIG00000024105) #20 HACD3 (ENSPCIG00000008851) #22 INTS14 (ENSPCIG00000008852) #23 ENSPCIG00000008854 #24 DENND4A (ENSPCIG00000006919) #25 RAB11A (ENSPCIG00000006878) #26 MEGF11 (ENSPCIG00000006843) #27 DIS3L (ENSPCIG00000006827) #28 TIPIN (ENSPCIG00000006818) #29 MAP2K1 (ENSPCIG00000006816) #30 ENSPCIG00000006812 #31 RPL4 (ENSPCIG00000006799) #32 ZWILCH (ENSPCIG00000006798) #33 LCTL (ENSPCIG00000006796) #34 SMAD6 (ENSPCIG00000006792) #35 SMAD3 (ENSPCIG00000014066) #37 AAGAB (ENSPCIG00000014065) Common wonbat MODERN SPECIES 581 PLEKHO2 (ENSVURG00010016489) ENSVURG00010016494 ANKDD1A (ENSVURG00010016514) SPG21 (ENSVURG00010016616) #7 MTFMT (ENSVURG00010016671) #8 RASL12 (ENSVURG00010016692) #10 KBTBD13 (ENSVURG00010016711) #11 UBAP1L (ENSVURG00010016718) #12 PDCD7 (ENSVURG00010016727) #13 CLPX (ENSVURG00010016746) #14 CILP (ENSVURG00010016754) #15 PARP16 (ENSVURG00010016773) #16 IGDCC3 (ENSVURG00010016786) #18 IGDCC4 (ENSVURG00010016817) #19 DPP8 (ENSVURG00010016847) #20 HACD3 (ENSVURG00010016877) #22 INTS14 (ENSVURG00010016912) #23 ENSVURG00010017031 #24 DENND4A (ENSVURG00010017069) #25 RAB11A (ENSVURG00010017156) #26 MEGF11 (ENSVURG00010017205) #27 DIS3L (ENSVURG00010017304) #28 TIPIN (ENSVURG00010017324) #29 MAP2K1 (ENSVURG00010017352) #30 SNAPC5 (ENSVURG00010017361) #31 RPL4 (ENSVURG00010017371) #32 ZWILCH (ENSVURG00010017403) #33 LCTL (ENSVURG00010017479) #34 SMAD6 (ENSVURG00010017499) #35 SMAD3 (ENSVURG00010017513) #37 AAGAB (ENSVURG00010017532) Wallaby MODERN SPECIES 4582 ENSMEUG00000012201 #22 Tasmanian devil MODERN SPECIES 1 ENSSHAG00000009145 ANKDD1A (ENSSHAG00000009607) MTFMT (ENSSHAG00000012265) #8 SPG21 (ENSSHAG00000009982) #7 ENSSHAG00000010231 #9 RASL12 (ENSSHAG00000010405) #10 KBTBD13 (ENSSHAG00000031944) #11 UBAP1L (ENSSHAG00000024296) #12 PDCD7 (ENSSHAG00000021601) #13 CLPX (ENSSHAG00000021063) #14 CILP (ENSSHAG00000011619) #15 PARP16 (ENSSHAG00000028933) #16 IGDCC3 (ENSSHAG00000012266) #18 IGDCC4 (ENSSHAG00000012686) #19 DPP8 (ENSSHAG00000012989) #20 HACD3 (ENSSHAG00000013349) #22 INTS14 (ENSSHAG00000013462) #23 SLC24A1 (ENSSHAG00000013623) #24 DENND4A (ENSSHAG00000002367) #25 RAB11A (ENSSHAG00000006622) #26 MEGF11 (ENSSHAG00000006869) #27 DIS3L (ENSSHAG00000010970) #28 TIPIN (ENSSHAG00000011237) #29 MAP2K1 (ENSSHAG00000029460) #30 SNAPC5 (ENSSHAG00000025154) #31 RPL4 (ENSSHAG00000002421) #32 ZWILCH (ENSSHAG00000002622) #33 LCTL (ENSSHAG00000003461) #34 SMAD6 (ENSSHAG00000007962) #35 SMAD3 (ENSSHAG00000023904) #37 AAGAB (ENSSHAG00000012729) Opossum MODERN SPECIES ENSMODG00000010455 ANKDD1A (ENSMODG00000010452) SPG21 (ENSMODG00000010438) #7 MTFMT (ENSMODG00000010418) #8 ENSMODG00000048415 #9 RASL12 (ENSMODG00000038689) #10 UBAP1L (ENSMODG00000029751) #12 PDCD7 (ENSMODG00000010358) #13 CLPX (ENSMODG00000010348) #14 ENSMODG00000029783 CILP (ENSMODG00000010296) #15 PARP16 (ENSMODG00000041084) #16 IGDCC3 (ENSMODG00000010271) #18 IGDCC4 (ENSMODG00000010244) #19 DPP8 (ENSMODG00000010208) #20 HACD3 (ENSMODG00000009893) #22 INTS14 (ENSMODG00000009876) #23 SLC24A1 (ENSMODG00000009861) #24 DENND4A (ENSMODG00000009838) #25 RAB11A (ENSMODG00000009810) #26 MEGF11 (ENSMODG00000009795) #27 DIS3L (ENSMODG00000009760) #28 TIPIN (ENSMODG00000009724) #29 ENSMODG00000039883 MAP2K1 (ENSMODG00000009715) #30 ENSMODG00000025470 #31 RPL4 (ENSMODG00000009657) #32 ZWILCH (ENSMODG00000009648) #33 LCTL (ENSMODG00000009632) #34 SMAD6 (ENSMODG00000009620) #35 SMAD3 (ENSMODG00000038564) #37 Platypus MODERN SPECIES 16 ENSOANG00000046297 ENSOANG00000042846 TNFAIP8L3 (ENSOANG00000005399) ENSOANG00000047689 SPG21 (ENSOANG00000038130) #7 CLPX (ENSOANG00000009957) #14 PDCD7 (ENSOANG00000039127) #13 KBTBD13 (ENSOANG00000037536) #11 RASL12 (ENSOANG00000047854) #10 MTFMT (ENSOANG00000036007) #8 CILP (ENSOANG00000002696) #15 PARP16 (ENSOANG00000008180) #16 IGDCC3 (ENSOANG00000012253) #18 IGDCC4 (ENSOANG00000011112) #19 DPP8 (ENSOANG00000008346) #20 ENSOANG00000046972 #22 INTS14 (ENSOANG00000001669) #23 ENSOANG00000043682 #24 DENND4A (ENSOANG00000044994) #25 RAB11A (ENSOANG00000038794) #26 MEGF11 (ENSOANG00000037204) #27 DIS3L (ENSOANG00000009753) #28 TIPIN (ENSOANG00000048848) #29 MAP2K1 (ENSOANG00000009750) #30 SNAPC5 (ENSOANG00000039654) #31 RPL4 (ENSOANG00000048650) #32 ZWILCH (ENSOANG00000004555) #33 LCTL (ENSOANG00000004554) #34 SMAD6 (ENSOANG00000042174) #35 SMAD3 (ENSOANG00000037003) #37 AAGAB (ENSOANG00000046695) Sauria ANCESTRAL SPECIES 10 ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00510000052431 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00950000182960.b ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Lepidosauria ANCESTRAL SPECIES 19 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00950000182960.b ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00950000186456 Episquamata ANCESTRAL SPECIES 9 ENSGT00950000182940.b.a.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00950000186456 ENSGT00390000008908 Laterata ANCESTRAL SPECIES 16 ENSGT00950000182940.b.a.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Common wall lizard MODERN SPECIES 5 SPG21 (ENSPMRG00000013948) #7 CLPX (ENSPMRG00000013971) #14 PDCD7 (ENSPMRG00000013985) #13 UBAP1L (ENSPMRG00000013988) #12 KBTBD13 (ENSPMRG00000013998) #11 RASL12 (ENSPMRG00000014003) #10 MTFMT (ENSPMRG00000014009) #8 CILP (ENSPMRG00000014021) #15 GNRHR (ENSPMRG00000014032) PARP16 (ENSPMRG00000014048) #16 IGDCC3 (ENSPMRG00000014065) #18 IGDCC4 (ENSPMRG00000014090) #19 DPP8 (ENSPMRG00000014125) #20 ENSPMRG00000014139 ENSPMRG00000014144 HACD3 (ENSPMRG00000014152) #22 INTS14 (ENSPMRG00000014159) #23 DENND4A (ENSPMRG00000014169) #25 RAB11A (ENSPMRG00000014183) #26 MEGF11 (ENSPMRG00000014263) #27 ENSPMRG00000014534 ENSPMRG00000014537 DIS3L (ENSPMRG00000014540) #28 TIPIN (ENSPMRG00000014546) #29 MAP2K1 (ENSPMRG00000014555) #30 SNAPC5 (ENSPMRG00000014563) #31 RPL4 (ENSPMRG00000014570) #32 ZWILCH (ENSPMRG00000014603) #33 SMAD6 (ENSPMRG00000014612) #35 ENSPMRG00000014621 #37 AAGAB (ENSPMRG00000014629) Argentine black and white tegu MODERN SPECIES 46 SV2B (ENSSMRG00000021607) ANKDD1A (ENSSMRG00000021606) SPG21 (ENSSMRG00000021605) #7 CLPX (ENSSMRG00000021604) #14 PDCD7 (ENSSMRG00000021603) #13 UBAP1L (ENSSMRG00000021602) #12 KBTBD13 (ENSSMRG00000021601) #11 RASL12 (ENSSMRG00000021600) #10 MTFMT (ENSSMRG00000021598) #8 CILP (ENSSMRG00000021597) #15 ENSSMRG00000021596 PARP16 (ENSSMRG00000021595) #16 IGDCC3 (ENSSMRG00000021594) #18 IGDCC4 (ENSSMRG00000021593) #19 DPP8 (ENSSMRG00000021592) #20 HACD3 (ENSSMRG00000021591) #22 INTS14 (ENSSMRG00000021590) #23 DENND4A (ENSSMRG00000021589) #25 RAB11A (ENSSMRG00000021588) #26 MEGF11 (ENSSMRG00000021585) #27 DIS3L (ENSSMRG00000021584) #28 TIPIN (ENSSMRG00000021582) #29 MAP2K1 (ENSSMRG00000021581) #30 SNAPC5 (ENSSMRG00000021580) #31 RPL4 (ENSSMRG00000021574) #32 ZWILCH (ENSSMRG00000021573) #33 SMAD6 (ENSSMRG00000021572) #35 SMAD3 (ENSSMRG00000021571) #37 AAGAB (ENSSMRG00000021570) IQCH (ENSSMRG00000021569) C15orf61 (ENSSMRG00000021568) Toxicofera ANCESTRAL SPECIES 40 ENSGT00950000182940.b.a.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00950000186456 ENSGT00390000008908 Elapidae ANCESTRAL SPECIES 12 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000156291 ENSGT00940000157540.A ENSGT00940000160523 ENSGT00510000048902.b ENSGT00940000156682 ENSGT00940000159268.d ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b.d #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00950000186456 ENSGT00390000008908 Elapidae_a ANCESTRAL SPECIES 37 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000156291 ENSGT00940000157540.A ENSGT00940000160523 ENSGT00940000156682 ENSGT00940000159268.d ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B.m #25 ENSGT00940000155836.B.n #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b.d #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Acanthophiinae ANCESTRAL SPECIES 37 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000156291 ENSGT00940000157540.A ENSGT00940000160523 ENSGT00940000156682 ENSGT00940000159268.d ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT00940000155836.B.m #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b.d #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000157505 Mainland tiger snake MODERN SPECIES 49 SPG21 (ENSNSUG00000002842) #7 CLPX (ENSNSUG00000002848) #14 PDCD7 (ENSNSUG00000002856) #13 KBTBD13 (ENSNSUG00000002870) #11 RASL12 (ENSNSUG00000002872) #10 CILP (ENSNSUG00000002889) #15 PARP16 (ENSNSUG00000002898) #16 IGDCC3 (ENSNSUG00000002912) #18 IGDCC4 (ENSNSUG00000002913) #19 MCTP2 (ENSNSUG00000002916) NR2F2 (ENSNSUG00000002923) ARRDC4 (ENSNSUG00000002927) IGF1R (ENSNSUG00000002935) SYNM (ENSNSUG00000002939) DPP8 (ENSNSUG00000002945) #20 HACD3 (ENSNSUG00000003778) #22 INTS14 (ENSNSUG00000003780) #23 ENSNSUG00000003906 #25 RAB11A (ENSNSUG00000003908) #26 MEGF11 (ENSNSUG00000003910) #27 ENSNSUG00000003922 #28 TIPIN (ENSNSUG00000003924) #29 MAP2K1 (ENSNSUG00000003931) #30 SNAPC5 (ENSNSUG00000003966) #31 ENSNSUG00000003967 #32 ZWILCH (ENSNSUG00000003975) #33 SMAD3 (ENSNSUG00000003978) #37 AAGAB (ENSNSUG00000003997) C15orf61 (ENSNSUG00000004019) MAP2K5 (ENSNSUG00000004022) Eastern brown snake MODERN SPECIES 43 PDCD7 (ENSPTXG00000015762) #13 UBAP1L (ENSPTXG00000015759) #12 KBTBD13 (ENSPTXG00000015758) #11 RASL12 (ENSPTXG00000015757) #10 MTFMT (ENSPTXG00000015656) #8 CILP (ENSPTXG00000015654) #15 PARP16 (ENSPTXG00000015653) #16 IGDCC3 (ENSPTXG00000015652) #18 IGDCC4 (ENSPTXG00000015649) #19 MCTP2 (ENSPTXG00000015590) NR2F2 (ENSPTXG00000015588) ARRDC4 (ENSPTXG00000015586) IGF1R (ENSPTXG00000015585) SYNM (ENSPTXG00000015583) DPP8 (ENSPTXG00000015569) #20 HACD3 (ENSPTXG00000015568) #22 INTS14 (ENSPTXG00000015567) #23 DENND4A (ENSPTXG00000015565) #25 RAB11A (ENSPTXG00000015564) #26 MEGF11 (ENSPTXG00000015560) #27 DIS3L (ENSPTXG00000015557) #28 TIPIN (ENSPTXG00000015555) #29 MAP2K1 (ENSPTXG00000015554) #30 SNAPC5 (ENSPTXG00000015552) #31 RPL4 (ENSPTXG00000015545) #32 SMAD6 (ENSPTXG00000015543) #35 SMAD3 (ENSPTXG00000015540) #37 AAGAB (ENSPTXG00000015539) IQCH (ENSPTXG00000015536) C15orf61 (ENSPTXG00000015534) MAP2K5 (ENSPTXG00000015531) Blue-lipped sea krait MODERN SPECIES 7781 HACD3 (ENSLLTG00000016593) #22 INTS14 (ENSLLTG00000016595) #23 ENSLLTG00000016601 #25 Indian cobra MODERN SPECIES 14 RASL12 (ENSNNAG00000003818) #10 MTFMT (ENSNNAG00000003854) #8 CILP (ENSNNAG00000004153) #15 PARP16 (ENSNNAG00000004225) #16 IGDCC3 (ENSNNAG00000004271) #18 IGDCC4 (ENSNNAG00000004504) #19 MCTP2 (ENSNNAG00000004568) NR2F2 (ENSNNAG00000004668) ENSNNAG00000004739 ENSNNAG00000004760 ARRDC4 (ENSNNAG00000004766) ENSNNAG00000004785 IGF1R (ENSNNAG00000004949) SYNM (ENSNNAG00000007433) DPP8 (ENSNNAG00000007591) #20 HACD3 (ENSNNAG00000009979) #22 INTS14 (ENSNNAG00000010021) #23 DENND4A (ENSNNAG00000010330) #25 RAB11A (ENSNNAG00000010435) #26 MEGF11 (ENSNNAG00000010468) #27 DIS3L (ENSNNAG00000010799) #28 TIPIN (ENSNNAG00000010924) #29 MAP2K1 (ENSNNAG00000010963) #30 SNAPC5 (ENSNNAG00000011012) #31 RPL4 (ENSNNAG00000011026) #32 ZWILCH (ENSNNAG00000011099) #33 SMAD6 (ENSNNAG00000011230) #35 SMAD3 (ENSNNAG00000011272) #37 AAGAB (ENSNNAG00000011287) ENSNNAG00000011356 IQCH (ENSNNAG00000011412) Lizard MODERN SPECIES 1115 ENSACAG00000041474 ENSACAG00000043295 #18 IGDCC4 (ENSACAG00000004850) #19 DPP8 (ENSACAG00000004752) #20 HACD3 (ENSACAG00000004719) #22 INTS14 (ENSACAG00000004673) #23 DENND4A (ENSACAG00000004531) #25 ENSACAG00000034809 ENSACAG00000041175 ENSACAG00000045369 RAB11A (ENSACAG00000004479) #26 MEGF11 (ENSACAG00000004442) #27 tuatara MODERN SPECIES 1605 PCSK6 (ENSSPUG00000010521) PLEKHO2 (ENSSPUG00000010218) ANKDD1A (ENSSPUG00000010169) SPG21 (ENSSPUG00000010154) #7 CLPX (ENSSPUG00000010113) #14 PDCD7 (ENSSPUG00000010062) #13 UBAP1L (ENSSPUG00000010040) #12 RASL12 (ENSSPUG00000009991) #10 ENSSPUG00000009869 #8 GNRHR (ENSSPUG00000009801) PARP16 (ENSSPUG00000009787) #16 ENSSPUG00000009766 IGDCC3 (ENSSPUG00000009723) #18 IGDCC4 (ENSSPUG00000009684) #19 DPP8 (ENSSPUG00000009654) #20 HACD3 (ENSSPUG00000009636) #22 INTS14 (ENSSPUG00000009616) #23 Archelosauria ANCESTRAL SPECIES 13 ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00510000052431 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00950000182960.b.f ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Archosauria ANCESTRAL SPECIES 9 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00950000182960.b.f ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Aves ANCESTRAL SPECIES 14 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Neognathae ANCESTRAL SPECIES 11 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Galloanserae ANCESTRAL SPECIES 10 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Anatidae ANCESTRAL SPECIES 36 ENSGT00940000159506 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Pink-footed goose MODERN SPECIES 52 ANKDD1A (ENSABRG00000009479) SPG21 (ENSABRG00000009446) #7 CLPX (ENSABRG00000009416) #14 ENSABRG00000009376 UBAP1L (ENSABRG00000009337) #12 KBTBD13 (ENSABRG00000009312) #11 RASL12 (ENSABRG00000009304) #10 MTFMT (ENSABRG00000009286) #8 CILP (ENSABRG00000009276) #15 GNRHR (ENSABRG00000009256) PARP16 (ENSABRG00000009242) #16 IGDCC3 (ENSABRG00000009234) #18 IGDCC4 (ENSABRG00000009006) #19 DPP8 (ENSABRG00000008939) #20 ENSABRG00000008924 HACD3 (ENSABRG00000008901) #22 INTS14 (ENSABRG00000008861) #23 SLC24A1 (ENSABRG00000008827) #24 DENND4A (ENSABRG00000008768) #25 RAB11A (ENSABRG00000008748) #26 MEGF11 (ENSABRG00000008723) #27 DIS3L (ENSABRG00000008682) #28 TIPIN (ENSABRG00000008669) #29 ENSABRG00000008668 MAP2K1 (ENSABRG00000008635) #30 SNAPC5 (ENSABRG00000008617) #31 RPL4 (ENSABRG00000008586) #32 ZWILCH (ENSABRG00000008567) #33 LCTL (ENSABRG00000008534) #34 SMAD6 (ENSABRG00000008516) #35 SMAD3 (ENSABRG00000008486) #37 Duck MODERN SPECIES 2 PLEKHO2 (ENSAPLG00000027780) ANKDD1A (ENSAPLG00000014397) SPG21 (ENSAPLG00000014668) #7 CLPX (ENSAPLG00000014863) #14 UBAP1L (ENSAPLG00000023567) #12 KBTBD13 (ENSAPLG00000015571) #11 RASL12 (ENSAPLG00000015628) #10 PARP16 (ENSAPLG00000015958) #16 ENSAPLG00000022299 MTFMT (ENSAPLG00000015719) #8 CILP (ENSAPLG00000026330) #15 GNRHR (ENSAPLG00000024770) IGDCC3 (ENSAPLG00000016111) #18 IGDCC4 (ENSAPLG00000013127) #19 DPP8 (ENSAPLG00000013345) #20 HACD3 (ENSAPLG00000013863) #22 INTS14 (ENSAPLG00000014064) #23 SLC24A1 (ENSAPLG00000014168) #24 DENND4A (ENSAPLG00000014243) #25 RAB11A (ENSAPLG00000014962) #26 MEGF11 (ENSAPLG00000015095) #27 DIS3L (ENSAPLG00000015294) #28 TIPIN (ENSAPLG00000015332) #29 MAP2K1 (ENSAPLG00000015480) #30 SNAPC5 (ENSAPLG00000001863) #31 RPL4 (ENSAPLG00000015853) #32 ZWILCH (ENSAPLG00000000968) #33 ENSAPLG00000028241 #34 SMAD6 (ENSAPLG00000000997) #35 SMAD3 (ENSAPLG00000007006) #37 AAGAB (ENSAPLG00000007346) Phasianidae ANCESTRAL SPECIES 11 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Japanese quail MODERN SPECIES 1 PCSK6 (ENSCJPG00005020709) PLEKHO2 (ENSCJPG00005020725) SPG21 (ENSCJPG00005020726) #7 CLPX (ENSCJPG00005020729) #14 PDCD7 (ENSCJPG00005020752) #13 UBAP1L (ENSCJPG00005020753) #12 KBTBD13 (ENSCJPG00005020754) #11 RASL12 (ENSCJPG00005020755) #10 MTFMT (ENSCJPG00005020757) #8 CILP (ENSCJPG00005020758) #15 ENSCJPG00005020760 PARP16 (ENSCJPG00005020761) #16 IGDCC3 (ENSCJPG00005020762) #18 IGDCC4 (ENSCJPG00005020763) #19 DPP8 (ENSCJPG00005020764) #20 HACD3 (ENSCJPG00005020802) #22 INTS14 (ENSCJPG00005020803) #23 SLC24A1 (ENSCJPG00005020804) #24 DENND4A (ENSCJPG00005020807) #25 RAB11A (ENSCJPG00005020908) #26 MEGF11 (ENSCJPG00005020910) #27 DIS3L (ENSCJPG00005020941) #28 TIPIN (ENSCJPG00005020942) #29 MAP2K1 (ENSCJPG00005020944) #30 SNAPC5 (ENSCJPG00005020958) #31 RPL4 (ENSCJPG00005020961) #32 ZWILCH (ENSCJPG00005020968) #33 SMAD6 (ENSCJPG00005020969) #35 SMAD3 (ENSCJPG00005020970) #37 AAGAB (ENSCJPG00005020971) IQCH (ENSCJPG00005020972) Phasianidae_b ANCESTRAL SPECIES 11 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Chicken MODERN SPECIES 1 PLEKHO2 (ENSGALG00010019123) ANKDD1A (ENSGALG00010019185) SPG21 (ENSGALG00010019230) #7 CLPX (ENSGALG00010017577) #14 PDCD7 (ENSGALG00010017616) #13 UBAP1L (ENSGALG00010017620) #12 KBTBD13 (ENSGALG00010017654) #11 RASL12 (ENSGALG00010017679) #10 MTFMT (ENSGALG00010017693) #8 CILP (ENSGALG00010017715) #15 GNRHR (ENSGALG00010017753) PARP16 (ENSGALG00010017761) #16 IGDCC3 (ENSGALG00010017764) #18 IGDCC4 (ENSGALG00010017782) #19 DPP8 (ENSGALG00010017805) #20 HACD3 (ENSGALG00010017811) #22 VWA9 (ENSGALG00010017815) #23 SLC24A1 (ENSGALG00010017819) #24 DENND4A (ENSGALG00010017830) #25 RAB11A (ENSGALG00010017870) #26 MEGF11 (ENSGALG00010017904) #27 DIS3L (ENSGALG00010017941) #28 TIPIN (ENSGALG00010017956) #29 MAP2K1 (ENSGALG00010018000) #30 SNAPC5 (ENSGALG00010018020) #31 RPL4 (ENSGALG00010018036) #32 ZWILCH (ENSGALG00010018042) #33 SMAD6 (ENSGALG00010018054) #35 SMAD3 (ENSGALG00010018099) #37 AAGAB (ENSGALG00010018150) IQCH (ENSGALG00010018192) Turkey MODERN SPECIES 3 SNRPA1 (ENSMGAG00000009427) PCSK6 (ENSMGAG00000009429) ENSMGAG00000009470 ENSMGAG00000009485 #7 CLPX (ENSMGAG00000009513) #14 UBAP1L (ENSMGAG00000017613) #12 KBTBD13 (ENSMGAG00000009546) #11 RASL12 (ENSMGAG00000009547) #10 MTFMT (ENSMGAG00000009584) #8 CILP (ENSMGAG00000009589) #15 ENSMGAG00000009590 PARP16 (ENSMGAG00000009579) #16 IGDCC3 (ENSMGAG00000009604) #18 IGDCC4 (ENSMGAG00000009630) #19 DPP8 (ENSMGAG00000009649) #20 HACD3 (ENSMGAG00000009683) #22 INTS14 (ENSMGAG00000009693) #23 SLC24A1 (ENSMGAG00000009715) #24 DENND4A (ENSMGAG00000009728) #25 RAB11A (ENSMGAG00000009797) #26 MEGF11 (ENSMGAG00000009776) #27 DIS3L (ENSMGAG00000009805) #28 TIPIN (ENSMGAG00000009857) #29 MAP2K1 (ENSMGAG00000009864) #30 ENSMGAG00000019153 RPL4 (ENSMGAG00000009822) #32 ZWILCH (ENSMGAG00000009851) #33 SMAD6 (ENSMGAG00000009875) #35 SMAD3 (ENSMGAG00000009879) #37 AAGAB (ENSMGAG00000009906) IQCH (ENSMGAG00000009928) Neognathae_b ANCESTRAL SPECIES 13 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Passeriformes ANCESTRAL SPECIES 12 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Great tit MODERN SPECIES 1 PLEKHO2 (ENSPMJG00000009784) ANKDD1A (ENSPMJG00000009785) SPG21 (ENSPMJG00000009786) #7 CLPX (ENSPMJG00000009789) #14 PDCD7 (ENSPMJG00000009809) #13 UBAP1L (ENSPMJG00000009813) #12 KBTBD13 (ENSPMJG00000009814) #11 RASL12 (ENSPMJG00000009816) #10 MTFMT (ENSPMJG00000009817) #8 CILP (ENSPMJG00000009819) #15 ENSPMJG00000009825 PARP16 (ENSPMJG00000009828) #16 IGDCC3 (ENSPMJG00000009863) #18 IGDCC4 (ENSPMJG00000009904) #19 DPP8 (ENSPMJG00000009912) #20 HACD3 (ENSPMJG00000009915) #22 INTS14 (ENSPMJG00000009916) #23 SLC24A1 (ENSPMJG00000009917) #24 DENND4A (ENSPMJG00000009918) #25 RAB11A (ENSPMJG00000009921) #26 MEGF11 (ENSPMJG00000009924) #27 DIS3L (ENSPMJG00000009931) #28 TIPIN (ENSPMJG00000009939) #29 MAP2K1 (ENSPMJG00000009964) #30 SNAPC5 (ENSPMJG00000009967) #31 RPL4 (ENSPMJG00000009971) #32 ZWILCH (ENSPMJG00000009977) #33 LCTL (ENSPMJG00000009979) #34 SMAD6 (ENSPMJG00000009983) #35 SMAD3 (ENSPMJG00000009991) #37 AAGAB (ENSPMJG00000009992) Passeriformes_d ANCESTRAL SPECIES 12 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 ENSGT00390000008908 Flycatcher MODERN SPECIES 1 PLEKHO2 (ENSFALG00000027240) ENSFALG00000010172 SPG21 (ENSFALG00000023877) #7 CLPX (ENSFALG00000010151) #14 PDCD7 (ENSFALG00000010138) #13 UBAP1L (ENSFALG00000010134) #12 KBTBD13 (ENSFALG00000015316) #11 RASL12 (ENSFALG00000010132) #10 MTFMT (ENSFALG00000010118) #8 CILP (ENSFALG00000010116) #15 ENSFALG00000010114 PARP16 (ENSFALG00000010108) #16 IGDCC3 (ENSFALG00000010105) #18 IGDCC4 (ENSFALG00000010102) #19 DPP8 (ENSFALG00000010098) #20 HACD3 (ENSFALG00000010085) #22 INTS14 (ENSFALG00000010068) #23 SLC24A1 (ENSFALG00000010063) #24 DENND4A (ENSFALG00000010056) #25 RAB11A (ENSFALG00000010052) #26 MEGF11 (ENSFALG00000010040) #27 DIS3L (ENSFALG00000010033) #28 TIPIN (ENSFALG00000010027) #29 MAP2K1 (ENSFALG00000028438) #30 SNAPC5 (ENSFALG00000025446) #31 ENSFALG00000028967 ENSFALG00000009988 ENSFALG00000009983 ENSFALG00000009980 ENSFALG00000009958 ENSFALG00000009937 Passeriformes_g ANCESTRAL SPECIES 13 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT01060000252718 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Passeroidea ANCESTRAL SPECIES 12 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT01060000252718 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Zebra finch MODERN SPECIES 1 PCSK6 (ENSTGUG00000008972) PLEKHO2 (ENSTGUG00000009006) ANKDD1A (ENSTGUG00000009014) SPG21 (ENSTGUG00000019593) #7 CLPX (ENSTGUG00000009033) #14 PDCD7 (ENSTGUG00000009069) #13 KBTBD13 (ENSTGUG00000020316) #11 RASL12 (ENSTGUG00000009081) #10 MTFMT (ENSTGUG00000009090) #8 CILP (ENSTGUG00000009096) #15 GNRHR (ENSTGUG00000020538) PARP16 (ENSTGUG00000009103) #16 IGDCC3 (ENSTGUG00000009117) #18 IGDCC4 (ENSTGUG00000009136) #19 DPP8 (ENSTGUG00000009145) #20 HACD3 (ENSTGUG00000009174) #22 INTS14 (ENSTGUG00000009182) #23 SLC24A1 (ENSTGUG00000009206) #24 DENND4A (ENSTGUG00000009220) #25 RAB11A (ENSTGUG00000009279) #26 MEGF11 (ENSTGUG00000009293) #27 DIS3L (ENSTGUG00000009315) #28 TIPIN (ENSTGUG00000009358) #29 ENSTGUG00000019914 MAP2K1 (ENSTGUG00000009363) #30 RPL4 (ENSTGUG00000009403) #32 ZWILCH (ENSTGUG00000009439) #33 LCTL (ENSTGUG00000009457) #34 SMAD6 (ENSTGUG00000009467) #35 SMAD3 (ENSTGUG00000009470) #37 AAGAB (ENSTGUG00000009497) Common canary MODERN SPECIES 12 PLEKHO2 (ENSSCAG00000010064) ANKDD1A (ENSSCAG00000010071) SPG21 (ENSSCAG00000010087) #7 CLPX (ENSSCAG00000010094) #14 PDCD7 (ENSSCAG00000010101) #13 UBAP1L (ENSSCAG00000010105) #12 KBTBD13 (ENSSCAG00000010108) #11 RASL12 (ENSSCAG00000010110) #10 MTFMT (ENSSCAG00000010115) #8 CILP (ENSSCAG00000010128) #15 GNRHR (ENSSCAG00000010133) PARP16 (ENSSCAG00000010143) #16 IGDCC3 (ENSSCAG00000010169) #18 IGDCC4 (ENSSCAG00000010185) #19 DPP8 (ENSSCAG00000010189) #20 HACD3 (ENSSCAG00000010199) #22 INTS14 (ENSSCAG00000010200) #23 SLC24A1 (ENSSCAG00000010206) #24 DENND4A (ENSSCAG00000010214) #25 RAB11A (ENSSCAG00000010226) #26 MEGF11 (ENSSCAG00000010255) #27 DIS3L (ENSSCAG00000010324) #28 TIPIN (ENSSCAG00000010328) #29 MAP2K1 (ENSSCAG00000010333) #30 ENSSCAG00000010341 RPL4 (ENSSCAG00000010344) #32 ZWILCH (ENSSCAG00000010364) #33 LCTL (ENSSCAG00000010374) #34 ENSSCAG00000010394 ENSSCAG00000010404 SMAD6 (ENSSCAG00000010407) #35 Medium ground finch MODERN SPECIES 69 PCSK6 (ENSGFOG00000009712) PLEKHO2 (ENSGFOG00000009993) ANKDD1A (ENSGFOG00000009999) SPG21 (ENSGFOG00000010013) #7 CLPX (ENSGFOG00000010023) #14 UBAP1L (ENSGFOG00000010035) #12 KBTBD13 (ENSGFOG00000010042) #11 RASL12 (ENSGFOG00000010043) #10 MTFMT (ENSGFOG00000010047) #8 CILP (ENSGFOG00000010056) #15 GNRHR (ENSGFOG00000010060) PARP16 (ENSGFOG00000010067) #16 IGDCC3 (ENSGFOG00000010086) #18 IGDCC4 (ENSGFOG00000010130) #19 DPP8 (ENSGFOG00000010227) #20 HACD3 (ENSGFOG00000010246) #22 INTS14 (ENSGFOG00000010255) #23 SLC24A1 (ENSGFOG00000010269) #24 DENND4A (ENSGFOG00000010346) #25 RAB11A (ENSGFOG00000011557) #26 MEGF11 (ENSGFOG00000011585) #27 DIS3L (ENSGFOG00000011782) #28 TIPIN (ENSGFOG00000011794) #29 MAP2K1 (ENSGFOG00000011801) #30 ENSGFOG00000011806 RPL4 (ENSGFOG00000011811) #32 ZWILCH (ENSGFOG00000011836) #33 LCTL (ENSGFOG00000011846) #34 SMAD6 (ENSGFOG00000011856) #35 SMAD3 (ENSGFOG00000011865) #37 ENSGFOG00000011872 Neognathae_c ANCESTRAL SPECIES 15 ENSGT00530000063760.a ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Kakapo MODERN SPECIES 1 ANKDD1A (ENSSHBG00005015083) SPG21 (ENSSHBG00005015042) #7 CLPX (ENSSHBG00005015027) #14 PDCD7 (ENSSHBG00005015010) #13 UBAP1L (ENSSHBG00005014999) #12 KBTBD13 (ENSSHBG00005014990) #11 RASL12 (ENSSHBG00005014984) #10 MTFMT (ENSSHBG00005014974) #8 CILP (ENSSHBG00005014963) #15 ENSSHBG00005014956 PARP16 (ENSSHBG00005014952) #16 IGDCC3 (ENSSHBG00005014931) #18 IGDCC4 (ENSSHBG00005014913) #19 ENSSHBG00005014900 DPP8 (ENSSHBG00005009877) #20 HACD3 (ENSSHBG00005009669) #22 INTS14 (ENSSHBG00005009649) #23 SLC24A1 (ENSSHBG00005009620) #24 DENND4A (ENSSHBG00005009346) #25 RAB11A (ENSSHBG00005009201) #26 ENSSHBG00005009181 #27 ENSSHBG00005009158 #27 DIS3L (ENSSHBG00005009084) #28 TIPIN (ENSSHBG00005009068) #29 MAP2K1 (ENSSHBG00005009053) #30 SNAPC5 (ENSSHBG00005009047) #31 RPL4 (ENSSHBG00005009017) #32 ZWILCH (ENSSHBG00005008951) #33 LCTL (ENSSHBG00005008922) #34 SMAD6 (ENSSHBG00005000779) #35 SMAD3 (ENSSHBG00005000770) #37 Golden eagle MODERN SPECIES 21 PLEKHO2 (ENSACCG00020008731) ANKDD1A (ENSACCG00020008748) SPG21 (ENSACCG00020008780) #7 CLPX (ENSACCG00020008811) #14 PDCD7 (ENSACCG00020008848) #13 UBAP1L (ENSACCG00020008862) #12 KBTBD13 (ENSACCG00020008880) #11 RASL12 (ENSACCG00020008888) #10 MTFMT (ENSACCG00020008908) #8 CILP (ENSACCG00020008937) #15 ENSACCG00020008952 PARP16 (ENSACCG00020008969) #16 IGDCC3 (ENSACCG00020009002) #18 IGDCC4 (ENSACCG00020009048) #19 DPP8 (ENSACCG00020009512) #20 HACD3 (ENSACCG00020009900) #22 INTS14 (ENSACCG00020009917) #23 SLC24A1 (ENSACCG00020009936) #24 DENND4A (ENSACCG00020009959) #25 RAB11A (ENSACCG00020009992) #26 MEGF11 (ENSACCG00020010081) #27 DIS3L (ENSACCG00020010156) #28 TIPIN (ENSACCG00020010172) #29 MAP2K1 (ENSACCG00020010187) #30 SNAPC5 (ENSACCG00020010201) #31 RPL4 (ENSACCG00020000310) #32 ZWILCH (ENSACCG00020000434) #33 LCTL (ENSACCG00020000480) #34 SMAD6 (ENSACCG00020000507) #35 SMAD3 (ENSACCG00020000522) #37 AAGAB (ENSACCG00020000560) African ostrich MODERN SPECIES 834 SNRPA1 (ENSSCUG00000013266) PCSK6 (ENSSCUG00000013263) PLEKHO2 (ENSSCUG00000013256) ANKDD1A (ENSSCUG00000013249) SPG21 (ENSSCUG00000013243) #7 CLPX (ENSSCUG00000013235) #14 KBTBD13 (ENSSCUG00000013233) #11 ENSSCUG00000013230 MTFMT (ENSSCUG00000013228) #8 CILP (ENSSCUG00000013224) #15 ENSSCUG00000013219 PARP16 (ENSSCUG00000013209) #16 IGDCC3 (ENSSCUG00000013201) #18 IGDCC4 (ENSSCUG00000013192) #19 DPP8 (ENSSCUG00000013188) #20 HACD3 (ENSSCUG00000013184) #22 INTS14 (ENSSCUG00000013179) #23 SLC24A1 (ENSSCUG00000013178) #24 DENND4A (ENSSCUG00000013174) #25 RAB11A (ENSSCUG00000013170) #26 MEGF11 (ENSSCUG00000013159) #27 DIS3L (ENSSCUG00000013154) #28 TIPIN (ENSSCUG00000013149) #29 Australian saltwater crocodile MODERN SPECIES 31 ANKDD1A (ENSCPRG00005018498) SPG21 (ENSCPRG00005000063) #7 CLPX (ENSCPRG00005000076) #14 ENSCPRG00005000092 UBAP1L (ENSCPRG00005000139) #12 KBTBD13 (ENSCPRG00005000153) #11 RASL12 (ENSCPRG00005000165) #10 MTFMT (ENSCPRG00005000206) #8 CILP (ENSCPRG00005000226) #15 GNRHR (ENSCPRG00005000240) PARP16 (ENSCPRG00005000279) #16 ENSCPRG00005000326 IGDCC3 (ENSCPRG00005000353) #18 IGDCC4 (ENSCPRG00005000364) #19 DPP8 (ENSCPRG00005000410) #20 HACD3 (ENSCPRG00005000454) #22 INTS14 (ENSCPRG00005000472) #23 ENSCPRG00005000476 #24 ENSCPRG00005000484 #24 DENND4A (ENSCPRG00005000499) #25 RAB11A (ENSCPRG00005000532) #26 MEGF11 (ENSCPRG00005000552) #27 DIS3L (ENSCPRG00005000594) #28 TIPIN (ENSCPRG00005000607) #29 MAP2K1 (ENSCPRG00005000623) #30 SNAPC5 (ENSCPRG00005000626) #31 RPL4 (ENSCPRG00005000630) #32 ZWILCH (ENSCPRG00005000651) #33 LCTL (ENSCPRG00005000669) #34 SMAD6 (ENSCPRG00005000698) #35 SMAD3 (ENSCPRG00005000730) #37 Cryptodira ANCESTRAL SPECIES 13 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00510000052431 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Testudinoidea ANCESTRAL SPECIES 6 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00510000052431 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Emydidae ANCESTRAL SPECIES 21 ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392 #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00510000052431 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764.b #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 painted turtle MODERN SPECIES 802 MTFMT (ENSCPBG00000014686) #8 CILP (ENSCPBG00000014676) #15 ENSCPBG00000014672 PARP16 (ENSCPBG00000014669) #16 IGDCC3 (ENSCPBG00000014663) #18 IGDCC4 (ENSCPBG00000014652) #19 DPP8 (ENSCPBG00000014645) #20 HACD3 (ENSCPBG00000014643) #22 INTS14 (ENSCPBG00000014639) #23 SLC24A1 (ENSCPBG00000014637) #24 DENND4A (ENSCPBG00000014626) #25 RAB11A (ENSCPBG00000014614) #26 MEGF11 (ENSCPBG00000014150) #27 DIS3L (ENSCPBG00000014111) #28 ENSCPBG00000014108 #29 MAP2K1 (ENSCPBG00000014102) #30 SNAPC5 (ENSCPBG00000014100) #31 RPL4 (ENSCPBG00000014091) #32 ZWILCH (ENSCPBG00000014089) #33 LCTL (ENSCPBG00000014087) #34 NADSYN1 (ENSCPBG00000014079) DHCR7 (ENSCPBG00000014076) ZDHHC13 (ENSCPBG00000014073) Three-toed box turtle MODERN SPECIES 27 PLEKHO2 (ENSTMTG00000006762) SPG21 (ENSTMTG00000006774) #7 CLPX (ENSTMTG00000006784) #14 PDCD7 (ENSTMTG00000006848) #13 UBAP1L (ENSTMTG00000006872) #12 KBTBD13 (ENSTMTG00000006908) #11 RASL12 (ENSTMTG00000006934) #10 ENSTMTG00000006996 MTFMT (ENSTMTG00000007020) #8 CILP (ENSTMTG00000007052) #15 ENSTMTG00000007083 PARP16 (ENSTMTG00000007137) #16 IGDCC3 (ENSTMTG00000007155) #18 IGDCC4 (ENSTMTG00000007233) #19 DPP8 (ENSTMTG00000007513) #20 HACD3 (ENSTMTG00000007567) #22 INTS14 (ENSTMTG00000007590) #23 SLC24A1 (ENSTMTG00000007638) #24 DENND4A (ENSTMTG00000007680) #25 RAB11A (ENSTMTG00000007735) #26 MEGF11 (ENSTMTG00000007756) #27 DIS3L (ENSTMTG00000007906) #28 ENSTMTG00000007940 #29 MAP2K1 (ENSTMTG00000007966) #30 ENSTMTG00000007987 ENSTMTG00000008003 #32 ZWILCH (ENSTMTG00000008057) #33 LCTL (ENSTMTG00000008371) #34 SMAD6 (ENSTMTG00000008403) #35 SMAD3 (ENSTMTG00000008413) #37 AAGAB (ENSTMTG00000008426) Testudinidae ANCESTRAL SPECIES 3 ENSGT00940000159506 ENSGT00530000063760.a ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00960000189242 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00960000193170 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Goode s thornscrub tortoise MODERN SPECIES 1 PLEKHO2 (ENSGEVG00005006925) SPG21 (ENSGEVG00005006892) #7 CLPX (ENSGEVG00005006842) #14 ENSGEVG00005006801 UBAP1L (ENSGEVG00005006777) #12 KBTBD13 (ENSGEVG00005006765) #11 ENSGEVG00005006705 #10 ENSGEVG00005006652 #10 MTFMT (ENSGEVG00005006568) #8 CILP (ENSGEVG00005006481) #15 ENSGEVG00005006396 PARP16 (ENSGEVG00005006356) #16 IGDCC3 (ENSGEVG00005006282) #18 IGDCC4 (ENSGEVG00005006195) #19 DPP8 (ENSGEVG00005006156) #20 HACD3 (ENSGEVG00005006129) #22 INTS14 (ENSGEVG00005006084) #23 SLC24A1 (ENSGEVG00005006015) #24 DENND4A (ENSGEVG00005005910) #25 RAB11A (ENSGEVG00005005859) #26 ENSGEVG00005005833 MEGF11 (ENSGEVG00005005633) #27 DIS3L (ENSGEVG00005005574) #28 TIPIN (ENSGEVG00005005547) #29 MAP2K1 (ENSGEVG00005005509) #30 SNAPC5 (ENSGEVG00005005478) #31 RPL4 (ENSGEVG00005005421) #32 ZWILCH (ENSGEVG00005005317) #33 LCTL (ENSGEVG00005005207) #34 SMAD6 (ENSGEVG00005005184) #35 SMAD3 (ENSGEVG00005005160) #37 Abingdon island giant tortoise MODERN SPECIES 2548 SNRPA1 (ENSCABG00000013576) PCSK6 (ENSCABG00000013580) PLEKHO2 (ENSCABG00000013628) SPG21 (ENSCABG00000013631) #7 CLPX (ENSCABG00000013633) #14 UBAP1L (ENSCABG00000013636) #12 KBTBD13 (ENSCABG00000013639) #11 RASL12 (ENSCABG00000013642) #10 MTFMT (ENSCABG00000013646) #8 CILP (ENSCABG00000013652) #15 ENSCABG00000013655 PARP16 (ENSCABG00000013665) #16 IGDCC3 (ENSCABG00000013669) #18 IGDCC4 (ENSCABG00000013673) #19 DPP8 (ENSCABG00000013708) #20 HACD3 (ENSCABG00000015923) #22 INTS14 (ENSCABG00000015930) #23 SLC24A1 (ENSCABG00000015939) #24 DENND4A (ENSCABG00000015963) #25 RAB11A (ENSCABG00000016119) #26 MEGF11 (ENSCABG00000016122) #27 ENSCABG00000016124 DIS3L (ENSCABG00000016126) #28 TIPIN (ENSCABG00000016127) #29 MAP2K1 (ENSCABG00000016130) #30 SNAPC5 (ENSCABG00000016133) #31 RPL4 (ENSCABG00000016134) #32 ZWILCH (ENSCABG00000016148) #33 LCTL (ENSCABG00000016203) #34 SMAD6 (ENSCABG00000016207) #35 Chinese turtle MODERN SPECIES 1534 ANKDD1A (ENSPSIG00000013712) SPG21 (ENSPSIG00000013709) #7 CLPX (ENSPSIG00000013590) #14 PDCD7 (ENSPSIG00000013569) #13 UBAP1L (ENSPSIG00000013562) #12 KBTBD13 (ENSPSIG00000000666) #11 RASL12 (ENSPSIG00000013266) #10 MTFMT (ENSPSIG00000013256) #8 CILP (ENSPSIG00000013247) #15 ENSPSIG00000013222 PARP16 (ENSPSIG00000013215) #16 IGDCC3 (ENSPSIG00000013033) #18 IGDCC4 (ENSPSIG00000012679) #19 ENSPSIG00000000654 DPP8 (ENSPSIG00000012529) #20 HACD3 (ENSPSIG00000012431) #22 INTS14 (ENSPSIG00000012238) #23 SLC24A1 (ENSPSIG00000012130) #24 DENND4A (ENSPSIG00000011965) #25 RAB11A (ENSPSIG00000011930) #26 ENSPSIG00000011794 #27 ENSPSIG00000011768 #27 DIS3L (ENSPSIG00000011629) #28 TIPIN (ENSPSIG00000011616) #29 MAP2K1 (ENSPSIG00000011457) #30 RPL4 (ENSPSIG00000011400) #32 ZWILCH (ENSPSIG00000011386) #33 LCTL (ENSPSIG00000011332) #34 Anura ANCESTRAL SPECIES ENSGT00940000154170.B ENSGT00390000007857 #7 ENSGT00390000017625 #14 ENSGT00390000017392.g #13 ENSGT00390000008092.b #12 ENSGT00940000161629 #11 ENSGT00940000160167 #10 ENSGT00390000017828 #8 ENSGT00390000018225.A ENSGT00390000008152.B.b #15 ENSGT01050000244841.A.a.a ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000010331 #31 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000158146 #35 ENSGT00940000153499.b.b #37 ENSGT00390000007218 Leishan spiny toad MODERN SPECIES 6 KBTBD13 (ENSLLEG00000007189) #11 RASL12 (ENSLLEG00000007219) #10 ENSLLEG00000007271 ENSLLEG00000007308 #8 ENSLLEG00000007446 ENSLLEG00000007538 ENSLLEG00000007550 CILP (ENSLLEG00000007563) #15 ENSLLEG00000007608 ENSLLEG00000007619 ENSLLEG00000007629 PARP16 (ENSLLEG00000007698) #16 IGDCC3 (ENSLLEG00000007896) #18 IGDCC4 (ENSLLEG00000005550) #19 DPP8 (ENSLLEG00000005938) #20 HACD3 (ENSLLEG00000006102) #22 INTS14 (ENSLLEG00000006176) #23 SLC24A1 (ENSLLEG00000006354) #24 DENND4A (ENSLLEG00000006505) #25 RAB11A (ENSLLEG00000007065) #26 MEGF11 (ENSLLEG00000007218) #27 ENSLLEG00000007739 DIS3L (ENSLLEG00000007758) #28 TIPIN (ENSLLEG00000007891) #29 ENSLLEG00000007941 #30 SNAPC5 (ENSLLEG00000008005) #31 ENSLLEG00000008024 ENSLLEG00000008052 #32 ZWILCH (ENSLLEG00000008260) #33 LCTL (ENSLLEG00000008419) #34 ENSLLEG00000009059 Frog MODERN SPECIES 3 ankdd1a (ENSXETG00000006661) spg21 (ENSXETG00000006659) #7 clpx (ENSXETG00000006656) #14 pdcd7 (ENSXETG00000040352) #13 ubap1l (ENSXETG00000036190) #12 kbtbd13 (ENSXETG00000006653) #11 rasl12 (ENSXETG00000040362) #10 mtfmt (ENSXETG00000006652) #8 XB5959486 [provisional] (ENSXETG00000006651) cilp (ENSXETG00000006650) #15 gnrhr2/nmi (ENSXETG00000038283) parp16 (ENSXETG00000006648) #16 igdcc3 (ENSXETG00000033022) #18 igdcc4 (ENSXETG00000006647) dpp8 (ENSXETG00000006646) #20 hacd3 (ENSXETG00000030041) #22 ints14 (ENSXETG00000006644) #23 slc24a1 (ENSXETG00000033301) #24 dennd4a (ENSXETG00000006641) #25 rab11a (ENSXETG00000006639) #26 megf11 (ENSXETG00000015852) #27 dis3l (ENSXETG00000015865) #28 tipin (ENSXETG00000024752) #29 map2k1 (ENSXETG00000015887) #30 snapc5 (ENSXETG00000015893) rpl4 (ENSXETG00000015898) #32 zwilch (ENSXETG00000015894) #33 lctl (ENSXETG00000015904) #34 smad6 (ENSXETG00000015939) #35 smad3 (ENSXETG00000007804) #37 aagab (ENSXETG00000007805) Coelacanth MODERN SPECIES 280 ADAMTS17 (ENSLACG00000017235) LYSMD4 (ENSLACG00000017183) CLPX (ENSLACG00000017095) #14 PDCD7 (ENSLACG00000017066) #13 KBTBD13 (ENSLACG00000016995) #11 RASL12 (ENSLACG00000016896) #10 MTFMT (ENSLACG00000016817) #8 si:ch73-314g15.3 (ENSLACG00000016787) CILP (ENSLACG00000016729) #15 gnrhr1 (ENSLACG00000016584) ENSLACG00000016540 PARP16 (ENSLACG00000016410) #16 IGDCC3 (ENSLACG00000015818) #18 IGDCC4 (ENSLACG00000014876) #19 DPP8 (ENSLACG00000014154) #20 HACD3 (ENSLACG00000013954) #22 INTS14 (ENSLACG00000013825) #23 DENND4A (ENSLACG00000012485) #25 RAB11A (ENSLACG00000012184) #26 MEGF11 (ENSLACG00000010981) #27 DIS3L (ENSLACG00000007995) #28 TIPIN (ENSLACG00000007807) #29 MAP2K1 (ENSLACG00000006464) #30 RPL4 (ENSLACG00000006259) #32 ZWILCH (ENSLACG00000005435) #33 LCTL (ENSLACG00000005143) #34 crybgx (ENSLACG00000004693) SNAPC5 (ENSLACG00000004572) #31 Actinopterygii ANCESTRAL SPECIES 92 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000153499.b.b.d #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Neopterygii ANCESTRAL SPECIES 85 ENSGT00530000063675.a ENSGT01040000240503.A.a.a ENSGT00390000018400 ENSGT00390000008152.B.b #15 ENSGT00950000183129.a #16 ENSGT00940000156969 #18 ENSGT00940000159637 #19 ENSGT00940000160717 #20 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000165149 ENSGT00940000166523 ENSGT00940000157244 ENSGT00940000155333.B #27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 Osteoglossocephalai ANCESTRAL SPECIES 148 ENSGT00940000156926.d ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369 #34 ENSGT00940000153499.b.b.d #37 ENSGT00390000007218 ENSGT00390000008908 Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES ENSGT00530000062962.b.a.e #22 Euteleosteomorpha ANCESTRAL SPECIES 261 ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000158477.a.a ENSGT00950000182959.b.a.a ENSGT00940000157490 ENSGT00390000002049.c.b ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.a ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #34 ENSGT00940000165890 Protacanthopterygii ANCESTRAL SPECIES 101 ENSGT00940000160309.e.b ENSGT00940000158707.a.a ENSGT00390000001802 ENSGT00940000159464 ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000153901.a.b.a ENSGT01000000216979 ENSGT00940000158477.a.a ENSGT00950000182959.b.a.a ENSGT00940000157490 ENSGT00390000002049.c.b ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000155744.t.a ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000154914.vb #26 ENSGT00940000155333.A.a ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #34 ENSGT00940000165890 ENSGT00940000168079 ENSGT00390000011190 ENSGT00940000157324 ENSGT00510000046704.b.b ENSGT00940000158441 ENSGT00510000047412.b ENSGT00940000156422 Salmoninae ANCESTRAL SPECIES 1 ENSGT00940000155733.a.a ENSGT00940000160892.f ENSGT01030000234588.b.b.b.b.a.a.b.c ENSGT01030000234588.b.b.b.b.a.b.a.e.b.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000153901.a.b.a ENSGT01000000216979 ENSGT00940000158477.a.a ENSGT00950000182959.b.a.a ENSGT00940000157490 ENSGT00390000002049.c.b ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000155744.t.a ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B.j #25 ENSGT00940000154914.vb #26 ENSGT00940000155333.A.a ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #34 ENSGT00940000165890 ENSGT00940000168079 ENSGT00390000011190 ENSGT00940000157324 ENSGT00510000046704.b.b ENSGT00940000158441 ENSGT00510000047412.b ENSGT00940000156422.i Huchen MODERN SPECIES 2902 ENSHHUG00000038923 ENSHHUG00000038918 arih1l (ENSHHUG00000038911) HACD3 (ENSHHUG00000038802) #22 ENSHHUG00000038769 #24 Salmoninae_a ANCESTRAL SPECIES 85 ENSGT00940000158707.a.a ENSGT00390000001802 ENSGT00940000159464 ENSGT01030000234588.b.b.b.b.a.b.b.b ENSGT01030000234588.b.b.b.b.a.b.b.a.b ENSGT01030000234588.b.b.b.b.a.b.b.a.a.b ENSGT00940000153901.a.b.a ENSGT00940000158477.a.a ENSGT00950000182959.b.a.a ENSGT00940000157490 ENSGT00390000002049.c.b ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000155744.t.a ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B.j #25 ENSGT00940000154914.vb #26 ENSGT00940000155333.A.a.i.a ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #34 ENSGT00940000165890 ENSGT00390000011190 ENSGT00940000157324.l ENSGT00510000046704.b.b.a ENSGT00940000158441 ENSGT00510000047412.b ENSGT00940000156422.i ENSGT00940000156422.j Salmo DUPLICATION Salmo ANCESTRAL SPECIES 112 ENSGT00940000163911.b.c.a.b ENSGT01030000234588.b.b.b.b.a.b.b.b ENSGT01030000234588.b.b.b.b.a.b.b.a.b ENSGT01030000234588.b.b.b.b.a.b.b.a.a.b ENSGT00940000153901.a.b.a ENSGT00940000158477.a.a.d ENSGT01000000216979.a ENSGT00940000158477.a.a.c ENSGT00950000182959.b.a.a ENSGT00940000157490 ENSGT00390000002049.c.b.l ENSGT00940000160967.f.b ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d.b ENSGT00940000155744.t.a ENSGT00530000062962.b.a.e.a #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B.j.b #25 ENSGT00940000154914.vb.a #26 ENSGT00940000155333.A.a.j ##27 ENSGT00940000155836.B.j.a #25 ENSGT00940000154914.vb.b #26 ENSGT00940000155333.A.a.i.a ##27 ENSGT00530000063106.B.j #28 ENSGT00390000005764.s #29 ENSGT00390000005764.t #29 ENSGT00940000157369.b #34 ENSGT00940000165890.b ENSGT00940000168079 ENSGT00940000157324.k ENSGT00510000046704.b.b.a.c Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 18 tnni2b.2 (ENSSSAG00000010154) TNNI2 (ENSSSAG00000010176) TNNI2 (ENSSSAG00000084513) ENSSSAG00000095150 ENSSSAG00000103815 ENSSSAG00000108582 TNNT3 (ENSSSAG00000009998) ENSSSAG00000010004 ENSSSAG00000056579 ENSSSAG00000104869 ENSSSAG00000010246 ENSSSAG00000119131 ENSSSAG00000009811 ENSSSAG00000009961 ENSSSAG00000095519 HACD3 (ENSSSAG00000095799) #22 SLC24A1 (ENSSSAG00000010183) #24 DENND4A (ENSSSAG00000082487) #25 RAB11A (ENSSSAG00000062971) #26 ENSSSAG00000092940 ##27 dis3l (ENSSSAG00000121052) #28 tipin (ENSSSAG00000043439) #29 lctla (ENSSSAG00000043842) #34 crybgx (ENSSSAG00000069661) RAMAC (ENSSSAG00000069672) homer2 (ENSSSAG00000098183) WHAMM (ENSSSAG00000110696) ENSSSAG00000095380 ENSSSAG00000073264 pde8a (ENSSSAG00000094947) gatm (ENSSSAG00000055493) Atlantic salmon MODERN SPECIES 2 ENSSSAG00000096849 ENSSSAG00000102508 tnni2b.2 (ENSSSAG00000115361) TNNI2 (ENSSSAG00000009799) ENSSSAG00000108614 ENSSSAG00000084840 myod1 (ENSSSAG00000040107) TNNT3 (ENSSSAG00000010002) ENSSSAG00000096205 ENSSSAG00000113698 ENSSSAG00000104282 ENSSSAG00000094543 ENSSSAG00000101082 ENSSSAG00000072984 ENSSSAG00000099816 HACD3 (ENSSSAG00000009594) #22 SLC24A1 (ENSSSAG00000009849) #24 DENND4A (ENSSSAG00000100635) #25 RAB11A (ENSSSAG00000099276) #26 ENSSSAG00000103573 ##27 tipin (ENSSSAG00000082602) #29 ENSSSAG00000008839 #34 crybgx (ENSSSAG00000008876) HOMER2 (ENSSSAG00000103439) ENSSSAG00000121906 ENSSSAG00000092676 FSD2 (ENSSSAG00000073255) ENSSSAG00000009779 pde8a (ENSSSAG00000097988) gatm (ENSSSAG00000069650) ENSSSAG00000108011 River trout MODERN SPECIES 21 ENSSTUG00000003710 ctsd (ENSSTUG00000003756) ENSSTUG00000004269 ENSSTUG00000004274 TNNI2 (ENSSTUG00000004289) tnni2b.1 (ENSSTUG00000004312) ENSSTUG00000004360 ENSSTUG00000004371 TNNT3 (ENSSTUG00000004390) myod1 (ENSSTUG00000004466) aph1b (ENSSTUG00000004478) ENSSTUG00000004484 ENSSTUG00000004489 NR2E3 (ENSSTUG00000004529) ARIH1 (ENSSTUG00000004569) HACD3 (ENSSTUG00000004705) #22 SLC24A1 (ENSSTUG00000004931) #24 dennd4a (ENSSTUG00000004971) #25 rab11a (ENSSTUG00000005754) #26 ENSSTUG00000005780 ##27 dis3l (ENSSTUG00000005812) #28 tipin (ENSSTUG00000005839) #29 lctla (ENSSTUG00000005848) #34 crybgx (ENSSTUG00000005860) ENSSTUG00000005865 HOMER2 (ENSSTUG00000005871) WHAMM (ENSSTUG00000005932) FSD2 (ENSSTUG00000005940) ENSSTUG00000005958 pde8a (ENSSTUG00000006015) ENSSTUG00000007632 Salmo ANCESTRAL SPECIES ENSGT00530000062962.b.a.e.b #22 River trout MODERN SPECIES 3 ctsd (ENSSTUG00000001706) ENSSTUG00000001858 ENSSTUG00000001870 ENSSTUG00000001875 TNNI2 (ENSSTUG00000001889) tnni2b.1 (ENSSTUG00000001896) ENSSTUG00000001903 ENSSTUG00000001917 myod1 (ENSSTUG00000001933) OTOG (ENSSTUG00000001950) aph1b (ENSSTUG00000002066) ENSSTUG00000002075 ENSSTUG00000002080 NR2E3 (ENSSTUG00000002100) arih1l (ENSSTUG00000002114) HACD3 (ENSSTUG00000002183) #22 SLC24A1 (ENSSTUG00000002229) #24 dennd4a (ENSSTUG00000002300) #25 rab11a (ENSSTUG00000004309) #26 ENSSTUG00000004325 leo1 (ENSSTUG00000004341) tmod2 (ENSSTUG00000004523) ppfia1 (ENSSTUG00000004645) ENSSTUG00000007012 ENSSTUG00000007041 arfgap2 (ENSSTUG00000007061) pex16 (ENSSTUG00000007120) slc22a18 (ENSSTUG00000007145) cars1 (ENSSTUG00000007209) cpt1aa (ENSSTUG00000008905) lingo1b (ENSSTUG00000009375) Oncorhynchus ANCESTRAL SPECIES ENSGT01010000222687.A.a ENSGT01010000223078.a ENSGT01010000223078.b ENSGT00390000004417.b ENSGT00390000004215.a.b.b.c.a.b.a.c.b ENSGT00940000160309.e.b.d ENSGT00940000158707.a.a ENSGT00390000001802 ENSGT00940000159464 ENSGT00940000157490 ENSGT00390000002049.c.b ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000155744.t.a ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B.j #25 ENSGT00940000154914.vb #26 ENSGT00940000155333.A.a.i.a ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #34 ENSGT00940000165890 ENSGT00390000011190 ENSGT00940000157324.l ENSGT00510000046704.b.b.a ENSGT00940000158441 ENSGT00940000156422.i ENSGT00390000011613 ENSGT00940000164068.a.b.a.a.a Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 18 ENSOMYG00000029425 ENSOMYG00000070828 ENSOMYG00000067636 ENSOMYG00000029106 ENSOMYG00000060665 ENSOMYG00000051029 ENSOMYG00000014317 myod (ENSOMYG00000061213) ENSOMYG00000052295 ENSOMYG00000040832 ENSOMYG00000076821 ENSOMYG00000061598 ENSOMYG00000062139 ENSOMYG00000054709 ENSOMYG00000074482 HACD3 (ENSOMYG00000040606) #22 SLC24A1 (ENSOMYG00000004910) #24 DENND4A (ENSOMYG00000065265) #25 RAB11A (ENSOMYG00000026657) #26 ENSOMYG00000074521 ##27 ENSOMYG00000021812 dis3l (ENSOMYG00000048031) #28 tipin (ENSOMYG00000050576) #29 lctla (ENSOMYG00000004788) #34 crybgx (ENSOMYG00000049421) ENSOMYG00000053924 homer2 (ENSOMYG00000000066) WHAMM (ENSOMYG00000067414) FSD2 (ENSOMYG00000050212) ENSOMYG00000049883 ENSOMYG00000075465 Rainbow trout MODERN SPECIES 27 ENSOMYG00000030016 ENSOMYG00000029399 ENSOMYG00000057374 ENSOMYG00000029082 ENSOMYG00000055514 TNNT3 (ENSOMYG00000049303) myod1 (ENSOMYG00000029242) ENSOMYG00000069614 ENSOMYG00000063706 ENSOMYG00000060149 ENSOMYG00000005082 ENSOMYG00000005006 ENSOMYG00000050119 ENSOMYG00000004974 ENSOMYG00000023825 HACD3 (ENSOMYG00000059785) #22 SLC24A1 (ENSOMYG00000004858) #24 DENND4A (ENSOMYG00000076284) #25 RAB11A (ENSOMYG00000049890) #26 ENSOMYG00000062709 ##27 dis3l (ENSOMYG00000052777) #28 tipin (ENSOMYG00000074288) #29 lctla (ENSOMYG00000056022) #34 crybgx (ENSOMYG00000048390) ENSOMYG00000050671 homer2 (ENSOMYG00000063764) WHAMM (ENSOMYG00000057419) FSD2 (ENSOMYG00000048469) ENSOMYG00000058373 ENSOMYG00000077619 ENSOMYG00000064324 Oncorhynchus_a ANCESTRAL SPECIES 106 ENSGT01010000222687.A.a ENSGT01010000223078.a ENSGT01010000223078.b ENSGT00390000004417.b ENSGT00390000004215.a.b.b.c.a.b.a.c.b ENSGT00940000160309.e.b.d ENSGT00940000158707.a.a ENSGT00390000001802 ENSGT00940000159464 ENSGT00940000157490 ENSGT00390000002049.c.b ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000155744.t.a ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #34 ENSGT00940000165890 ENSGT00390000011190 ENSGT00940000157324.l ENSGT00510000046704.b.b.b ENSGT00940000158441 ENSGT00940000156422.i ENSGT00390000011613 ENSGT00940000164068.a.b.a.a.a ENSGT00940000157938.j.b ENSGT00940000163460.a.a.c.a.b ENSGT00940000157542 Coho salmon DUPLICATION Coho salmon MODERN SPECIES 32 ENSOKIG00005017964 ENSOKIG00005017958 TNNI2 (ENSOKIG00005017950) tnni2b.1 (ENSOKIG00005017934) tnni2b.1 (ENSOKIG00005017921) ENSOKIG00005017897 TNNT3 (ENSOKIG00005017863) MYOD1 (ENSOKIG00005017854) ENSOKIG00005017845 OTOG (ENSOKIG00005017697) aph1b (ENSOKIG00005017675) ENSOKIG00005017668 ENSOKIG00005017602 NR2E3 (ENSOKIG00005043003) arih1l (ENSOKIG00005042766) HACD3 (ENSOKIG00005042645) #22 SLC24A1 (ENSOKIG00005042621) #24 ENSOKIG00005042607 DENND4A (ENSOKIG00005041726) #25 ENSOKIG00005041656 ENSOKIG00005041640 rab11a (ENSOKIG00005041589) #26 dis3l (ENSOKIG00005040437) #28 ENSOKIG00005040323 #29 lctla (ENSOKIG00005040258) #34 crybgx (ENSOKIG00005040244) ENSOKIG00005040199 HOMER2 (ENSOKIG00005040071) WHAMM (ENSOKIG00005040049) FSD2 (ENSOKIG00005040033) ENSOKIG00005040012 Coho salmon MODERN SPECIES 207 ARIH1 (ENSOKIG00005025617) HACD3 (ENSOKIG00005025529) #22 ENSOKIG00005025517 #24 Chinook salmon MODERN SPECIES 471 ENSOTSG00005037943 ENSOTSG00005037945 ENSOTSG00005037963 ENSOTSG00005037964 kif3a (ENSOTSG00005037975) ENSOTSG00005040087 HACD3 (ENSOTSG00005040089) #22 Northern pike MODERN SPECIES 1 ENSELUG00000033770 ENSELUG00000028980 ENSELUG00000028322 tnni2b.1 (ENSELUG00000018719) ENSELUG00000018743 ENSELUG00000018803 ENSELUG00000026443 TNNT3 (ENSELUG00000018827) MYOD1 (ENSELUG00000018844) OTOG (ENSELUG00000018933) aph1b (ENSELUG00000018962) ENSELUG00000018968 ENSELUG00000019041 NR2E3 (ENSELUG00000019079) arih1l (ENSELUG00000019125) HACD3 (ENSELUG00000019142) #22 SLC24A1 (ENSELUG00000019158) #24 dennd4a (ENSELUG00000000821) #25 RAB11B (ENSELUG00000019240) ENSELUG00000019353 ##27 dis3l (ENSELUG00000019420) #28 tipin (ENSELUG00000019453) #29 lctla (ENSELUG00000019497) #34 crybgx (ENSELUG00000019531) homer2 (ENSELUG00000019561) ENSELUG00000019542 WHAMM (ENSELUG00000019600) ENSELUG00000019658 ENSELUG00000019621 pde8a (ENSELUG00000019742) gatm (ENSELUG00000001472) Acanthomorphata ANCESTRAL SPECIES 28 ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000167951 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00940000163716.c.b ENSGT00940000161051.a.a.b.a ENSGT00940000161832.a ENSGT00390000017480 ENSGT00390000014065 ENSGT00390000009453.fb.b Euacanthomorphacea ANCESTRAL SPECIES 44 ENSGT00940000158287 ENSGT00940000154963 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00940000163716.c.b ENSGT00940000161832.a ENSGT00390000017480 ENSGT00390000014065 ENSGT00390000009453.fb.b ENSGT00940000156813 ENSGT00390000011608 Percomorphaceae ANCESTRAL SPECIES 15 ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Tiger tail seahorse MODERN SPECIES 136 ENSHCOG00000006770 ENSHCOG00000006783 iqgap1 (ENSHCOG00000006905) ENSHCOG00000006926 CRTC3 (ENSHCOG00000006945) ENSHCOG00000006965 SERINC4 (ENSHCOG00000006989) hypk (ENSHCOG00000007002) mfap1 (ENSHCOG00000007017) hddc3 (ENSHCOG00000007034) ENSHCOG00000007050 prc1b (ENSHCOG00000007079) ptpmt1 (ENSHCOG00000000812) ndufs3 (ENSHCOG00000007117) slc22a18 (ENSHCOG00000007148) HACD3 (ENSHCOG00000000227) #22 SLC24A1 (ENSHCOG00000007190) #24 ENSHCOG00000007227 #25 socs4 (ENSHCOG00000007249) wdhd1 (ENSHCOG00000007286) ENSHCOG00000007299 gch1 (ENSHCOG00000007311) SAMD4A (ENSHCOG00000007338) pacsin3 (ENSHCOG00000007361) GLG1 (ENSHCOG00000007399) tnni2b.1 (ENSHCOG00000007414) aph1b (ENSHCOG00000007434) OTOG (ENSHCOG00000007493) myod1 (ENSHCOG00000007505) TNNT3 (ENSHCOG00000007514) ENSHCOG00000007520 Percomorphaceae_B ANCESTRAL SPECIES 12 ENSGT00940000154963 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT01030000234990 Ovalentaria ANCESTRAL SPECIES 17 ENSGT00940000154963 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Atherinomorphae ANCESTRAL SPECIES 8 ENSGT00940000158287 ENSGT00940000163467.a.b.b.a.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000177294 Oryzias ANCESTRAL SPECIES 79 ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 ENSGT00940000162993 Oryzias_b ANCESTRAL SPECIES 81 ENSGT00940000157462.C.c.a ENSGT00950000182839.B.b.a ENSGT00390000013260.A.a ENSGT00940000165480.b ENSGT00940000165480.a ENSGT01090000261483 ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b ENSGT00940000158565 ENSGT01050000244900.a.a.b.eb ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00390000013481.c.a ENSGT00390000002030 ENSGT00940000166202 ENSGT00940000153875.d.b ENSGT00940000155024.a.b.d ENSGT00940000153216.a.a.c.a ENSGT00940000153216.a.a.c.b.h ENSGT00940000154258.b ENSGT00950000183083.a.d.a ENSGT01030000234633.A.a.a ENSGT00940000156431 ENSGT00940000155405 ENSGT00940000158481.d Indian medaka MODERN SPECIES 25 AFDN (ENSOMEG00000001895) ENSOMEG00000001833 rfx6 (ENSOMEG00000001825) pyroxd1 (ENSOMEG00000000678) ETNK1 (ENSOMEG00000001804) ENSOMEG00000001795 sox5 (ENSOMEG00000001776) ENSOMEG00000001762 ENSOMEG00000001760 lrmp (ENSOMEG00000001741) dnai7 (ENSOMEG00000001668) lyrm5a (ENSOMEG00000001658) ENSOMEG00000001652 SLC5A8 (ENSOMEG00000001611) HACD3 (ENSOMEG00000023636) #22 ENSOMEG00000023620 #24 ENSOMEG00000023603 UTP20 (ENSOMEG00000023583) arl1 (ENSOMEG00000023497) DENND11 (ENSOMEG00000023488) ENSOMEG00000023481 mapk11 (ENSOMEG00000023468) mapk12b (ENSOMEG00000023455) ENSOMEG00000023440 atp23 (ENSOMEG00000023435) lrig3 (ENSOMEG00000023429) zgc:165507 (ENSOMEG00000023409) ENSOMEG00000023392 ENSOMEG00000023376 ETV6 (ENSOMEG00000023372) Javanese ricefish MODERN SPECIES 17 BRSK2 (ENSOJAG00000004004) rassf7b (ENSOJAG00000003851) ENSOJAG00000003836 guca1g (ENSOJAG00000003824) ENSOJAG00000003695 ENSOJAG00000003645 ENSOJAG00000003557 ENSOJAG00000003509 SHANK2 (ENSOJAG00000003489) CTTN (ENSOJAG00000003344) ppfia1 (ENSOJAG00000001530) NR2E3 (ENSOJAG00000001358) ENSOJAG00000001351 slc22a18 (ENSOJAG00000001340) ENSOJAG00000001336 HACD3 (ENSOJAG00000001325) #22 SLC24A1 (ENSOJAG00000001310) #24 dennd4a (ENSOJAG00000001299) #25 gch1 (ENSOJAG00000001275) wdhd1 (ENSOJAG00000001255) socs4 (ENSOJAG00000001249) tppp3 (ENSOJAG00000001244) ENSOJAG00000001238 trpm1a (ENSOJAG00000001224) ENSOJAG00000001203 ENSOJAG00000001193 ENSOJAG00000001189 ENSOJAG00000001186 ctrb.3 (ENSOJAG00000001170) ctrb.2 (ENSOJAG00000001162) ENSOJAG00000001150 Oryzias_a ANCESTRAL SPECIES 116 ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT00390000002049.c.b ENSGT00940000157490 Japanese Medaka HdrR MODERN SPECIES 17 ENSORLG00000024280 ENSORLG00000000045 ENSORLG00000024777 ENSORLG00000026014 SHANK2 (ENSORLG00000000038) CTTN (ENSORLG00000000034) ENSORLG00000027345 PPFIA1 (ENSORLG00000000029) ENSORLG00000030646 ENSORLG00000000021 ENSORLG00000000025 ENSORLG00000027474 ENSORLG00000028710 NR2E3 (ENSORLG00000000011) slc22a18 (ENSORLG00000000010) ENSORLG00000000006 #22 ENSORLG00000028788 ENSORLG00000028322 ENSORLG00000026580 ENSORLG00000026697 ENSORLG00000023506 ENSORLG00000030232 ENSORLG00000026795 ENSORLG00000022981 SLC24A1 (ENSORLG00000025324) #24 ENSORLG00000025274 #25 socs4 (ENSORLG00000023960) ENSORLG00000029540 ENSORLG00000026358 ENSORLG00000025194 ENSORLG00000029333 Chinese medaka MODERN SPECIES 4167 ENSOSIG00000013685 #22 Cyprinodontiformes ANCESTRAL SPECIES 9 ENSGT00940000158287 ENSGT00940000163467.a.b.b.a.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000177294 Aplocheiloidei ANCESTRAL SPECIES 39 ENSGT00940000158287 ENSGT00940000163467.a.b.b.a.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000177294 Mangrove rivulus MODERN SPECIES 94 NELL1 (ENSKMAG00000020064) ENSKMAG00000020107 slc6a5 (ENSKMAG00000020116) prmt3 (ENSKMAG00000020166) htatip2 (ENSKMAG00000020191) dbx1a (ENSKMAG00000020206) NAV2 (ENSKMAG00000020245) e2f8 (ENSKMAG00000020305) csrp3 (ENSKMAG00000020338) zdhhc13 (ENSKMAG00000020369) mpped2a (ENSKMAG00000020431) ENSKMAG00000020454 ENSKMAG00000020462 NR2E3 (ENSKMAG00000020481) slc22a18 (ENSKMAG00000020503) HACD3 (ENSKMAG00000020519) #22 SAMD4A (ENSKMAG00000020543) gch1 (ENSKMAG00000020574) wdhd1 (ENSKMAG00000020604) socs4 (ENSKMAG00000020674) ENSKMAG00000020680 dennd4a (ENSKMAG00000020759) #25 SLC24A1 (ENSKMAG00000020920) #24 ero1a (ENSKMAG00000020950) pacsin3 (ENSKMAG00000021024) glg1b (ENSKMAG00000021075) tnni2b.1 (ENSKMAG00000021151) aph1b (ENSKMAG00000021168) OTOG (ENSKMAG00000021189) myod1 (ENSKMAG00000021238) TNNT3 (ENSKMAG00000021246) Turquoise killifish MODERN SPECIES 1616 ENSNFUG00015003982 TNNT3 (ENSNFUG00015003986) myod1 (ENSNFUG00015003991) aph1b (ENSNFUG00015004030) ENSNFUG00015004036 tnni2b.1 (ENSNFUG00015004041) ENSNFUG00015004056 E2F8 (ENSNFUG00015004061) CSRP3 (ENSNFUG00015004067) ZDHHC13 (ENSNFUG00015004092) MPPED2 (ENSNFUG00015004145) ENSNFUG00015004153 STRA6 (ENSNFUG00015004168) NR2E3 (ENSNFUG00015004197) SLC22A18 (ENSNFUG00015004215) PTPLAD1 (ENSNFUG00015004247) #22 SLC24A1 (ENSNFUG00015004331) #24 dennd4a (ENSNFUG00015004412) #25 ENSNFUG00015004502 socs4 (ENSNFUG00015004506) WDHD1 (ENSNFUG00015004515) GCH1 (ENSNFUG00015004539) SAMD4A (ENSNFUG00015004563) PACSIN3 (ENSNFUG00015004592) ENSNFUG00015004640 pacsin3 (ENSNFUG00015004647) GLG1 (ENSNFUG00015004673) NAV2 (ENSNFUG00015005223) OLA.2304 (ENSNFUG00015006227) HTATIP2 (ENSNFUG00015006232) PRMT3 (ENSNFUG00015006258) Cyprinodontoidei ANCESTRAL SPECIES 6 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000177294 NAME_4 ANCESTRAL SPECIES 66 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A.ac.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030.n ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000177294 Sheepshead minnow MODERN SPECIES 198 slc6a5 (ENSCVAG00000004641) prmt3 (ENSCVAG00000004723) htatip2 (ENSCVAG00000004752) dbx1a (ENSCVAG00000000143) NAV2 (ENSCVAG00000004848) e2f8 (ENSCVAG00000004920) csrp3 (ENSCVAG00000004937) zdhhc13 (ENSCVAG00000004950) mpped2a (ENSCVAG00000004974) ENSCVAG00000005070 ENSCVAG00000005078 ENSCVAG00000005151 NR2E3 (ENSCVAG00000005210) slc22a18 (ENSCVAG00000005226) HACD3 (ENSCVAG00000005529) #22 SLC24A1 (ENSCVAG00000005559) #24 dennd4a (ENSCVAG00000005774) #25 socs4 (ENSCVAG00000005809) wdhd1 (ENSCVAG00000006106) gch1 (ENSCVAG00000006132) SAMD4A (ENSCVAG00000006183) ero1a (ENSCVAG00000006196) pacsin3 (ENSCVAG00000006247) glg1b (ENSCVAG00000006375) tnni2b.1 (ENSCVAG00000006390) aph1b (ENSCVAG00000006407) OTOG (ENSCVAG00000000628) myod1 (ENSCVAG00000006504) TNNT3 (ENSCVAG00000006519) ENSCVAG00000006531 Mummichog MODERN SPECIES 2279 lrp4 (ENSFHEG00000021307) ENSFHEG00000021337 NELL1 (ENSFHEG00000021393) slc6a5 (ENSFHEG00000021451) prmt3 (ENSFHEG00000021475) htatip2 (ENSFHEG00000021519) dbx1a (ENSFHEG00000021545) NAV2 (ENSFHEG00000022260) csrp3 (ENSFHEG00000022329) zdhhc13 (ENSFHEG00000022440) mpped2a (ENSFHEG00000022477) ENSFHEG00000022514 ENSFHEG00000022562 NR2E3 (ENSFHEG00000022629) slc22a18 (ENSFHEG00000022663) HACD3 (ENSFHEG00000022712) #22 SLC24A1 (ENSFHEG00000022722) #24 Poeciliinae ANCESTRAL SPECIES 13 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00390000011262.e.b ENSGT00950000182973.b.a ENSGT00390000007753.b ENSGT00940000157933 ENSGT00390000013481.c.a ENSGT00390000002030.l ENSGT00940000166202 ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Poecilia ANCESTRAL SPECIES 4 ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00390000011262.e.b ENSGT00950000182973.b.a ENSGT00390000007753.b ENSGT00940000157933 ENSGT00390000013481.c.a ENSGT00390000002030.l ENSGT00940000166202 ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 NAME_6 ANCESTRAL SPECIES 92 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a.d.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a.d.a ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a.c ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00390000011262.e.b ENSGT00950000182973.b.a ENSGT00390000007753.b ENSGT00940000157933 ENSGT00390000013481.c.a ENSGT00390000002030.l ENSGT00940000166202 ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Sailfin molly MODERN SPECIES 566 ENSPLAG00000003653 ENSPLAG00000003638 NR2E3 (ENSPLAG00000003619) ENSPLAG00000003612 ENSPLAG00000003597 ENSPLAG00000003596 slc22a18 (ENSPLAG00000003591) HACD3 (ENSPLAG00000003583) #22 SLC24A1 (ENSPLAG00000000057) #24 dennd4a (ENSPLAG00000003539) #25 glg1b (ENSPLAG00000003435) pacsin3 (ENSPLAG00000003395) ero1a (ENSPLAG00000003361) ENSPLAG00000003352 Amazon molly MODERN SPECIES 350 prmt3 (ENSPFOG00000003622) htatip2 (ENSPFOG00000003994) dbx1a (ENSPFOG00000004028) NAV2 (ENSPFOG00000004146) ENSPFOG00000000656 e2f8 (ENSPFOG00000005584) csrp3 (ENSPFOG00000023629) zdhhc13 (ENSPFOG00000005728) mpped2a (ENSPFOG00000005905) ENSPFOG00000020325 ENSPFOG00000005972 NR2E3 (ENSPFOG00000006106) ENSPFOG00000006219 ENSPFOG00000006238 slc22a18 (ENSPFOG00000006271) HACD3 (ENSPFOG00000006432) #22 ENSPFOG00000006545 #24 dennd4a (ENSPFOG00000006791) #25 glg1b (ENSPFOG00000007965) pacsin3 (ENSPFOG00000008277) ero1a (ENSPFOG00000008385) SAMD4A (ENSPFOG00000008620) gch1 (ENSPFOG00000008835) wdhd1 (ENSPFOG00000008914) ENSPFOG00000022454 socs4 (ENSPFOG00000009206) tnni2b.1 (ENSPFOG00000009219) aph1b (ENSPFOG00000009273) OTOG (ENSPFOG00000009345) myod1 (ENSPFOG00000009843) TNNT3 (ENSPFOG00000009845) Guppy MODERN SPECIES 455 NELL1 (ENSPREG00000019953) slc6a5 (ENSPREG00000019890) prmt3 (ENSPREG00000019857) htatip2 (ENSPREG00000019845) dbx1a (ENSPREG00000019836) ENSPREG00000019829 NAV2 (ENSPREG00000019505) e2f8 (ENSPREG00000019385) csrp3 (ENSPREG00000019363) zdhhc13 (ENSPREG00000019340) mpped2a (ENSPREG00000019313) ENSPREG00000019289 ENSPREG00000019267 ENSPREG00000019254 slc22a18 (ENSPREG00000019227) HACD3 (ENSPREG00000019209) #22 SLC24A1 (ENSPREG00000019149) #24 dennd4a (ENSPREG00000018994) #25 glg1b (ENSPREG00000018842) pacsin3 (ENSPREG00000018797) ero1a (ENSPREG00000018741) ENSPREG00000018709 ENSPREG00000018696 SAMD4A (ENSPREG00000018648) gch1 (ENSPREG00000018570) wdhd1 (ENSPREG00000018533) socs4 (ENSPREG00000018515) tnni2b.1 (ENSPREG00000018498) aph1b (ENSPREG00000018474) ENSPREG00000018462 myod1 (ENSPREG00000018453) Platyfish MODERN SPECIES 18 prmt3 (ENSXMAG00000010154) htatip2 (ENSXMAG00000010179) dbx1a (ENSXMAG00000010186) NAV2 (ENSXMAG00000010189) ENSXMAG00000024557 e2f8 (ENSXMAG00000010237) csrp3 (ENSXMAG00000027973) zdhhc13 (ENSXMAG00000010253) mpped2a (ENSXMAG00000010273) ENSXMAG00000019869 ENSXMAG00000010292 NR2E3 (ENSXMAG00000010311) ENSXMAG00000027678 ENSXMAG00000029990 slc22a18 (ENSXMAG00000010324) HACD3 (ENSXMAG00000010327) #22 SLC24A1 (ENSXMAG00000010371) #24 dennd4a (ENSXMAG00000010376) #25 glg1b (ENSXMAG00000010415) pacsin3 (ENSXMAG00000022122) ero1a (ENSXMAG00000029457) ENSXMAG00000023464 SAMD4A (ENSXMAG00000009864) gch1 (ENSXMAG00000009846) wdhd1 (ENSXMAG00000009823) socs4 (ENSXMAG00000020189) tnni2b.1 (ENSXMAG00000009816) aph1b (ENSXMAG00000009804) OTOG (ENSXMAG00000009782) myod1 (ENSXMAG00000009780) TNNT3 (ENSXMAG00000027991) Ovalentaria_B ANCESTRAL SPECIES 10 ENSGT00940000154963 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT01030000234990 Cichlidae ANCESTRAL SPECIES 11 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT01030000234990 Pseudocrenilabrinae ANCESTRAL SPECIES 13 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT01030000234990 Pseudocrenilabrinae_A ANCESTRAL SPECIES 32 ENSGT00390000010652.C ENSGT00940000160456 ENSGT01030000234623.a.b.b ENSGT00390000008502 ENSGT00690000102225 ENSGT00390000011608 ENSGT00940000156813 ENSGT00390000009453.fb.b ENSGT00390000014065 ENSGT00390000017480 ENSGT00940000161832.a ENSGT00940000161051.a.a.b.a.o.b ENSGT00940000163716.c.b.b ENSGT00390000002200.a.a ENSGT00940000162993 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Haplochromini ANCESTRAL SPECIES 34 ENSGT00390000010652.C ENSGT00940000160456 ENSGT01030000234623.a.b.b ENSGT00390000008502 ENSGT00690000102225 ENSGT00390000011608 ENSGT00940000156813 ENSGT00390000009453.fb.b ENSGT00390000014065 ENSGT00390000017480 ENSGT00940000161832.a ENSGT00940000163716.c.b.a ENSGT00940000163716.c.b.b ENSGT00390000002200.a.a ENSGT00940000162993 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030.o ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Haplochromini_A ANCESTRAL SPECIES 39 ENSGT00390000010652.C ENSGT00940000160456 ENSGT01030000234623.a.b.b ENSGT00390000008502 ENSGT00690000102225 ENSGT00390000011608 ENSGT00940000156813 ENSGT00390000009453.fb.b ENSGT00390000014065 ENSGT00390000017480 ENSGT00940000161832.a ENSGT00940000163716.c.b.a ENSGT00940000163716.c.b.b ENSGT00390000002200.a.a ENSGT00940000162993 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030.o ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Haplochromini_B ANCESTRAL SPECIES 56 ENSGT00390000010652.C ENSGT00940000160456 ENSGT01030000234623.a.b.b ENSGT00390000008502 ENSGT00690000102225 ENSGT00390000011608 ENSGT00940000156813 ENSGT00390000009453.fb.b ENSGT00390000014065 ENSGT00390000017480 ENSGT00940000161832.a ENSGT00940000161051.a.a.b.a.o.b ENSGT01020000230593.B.a.a.b.a ENSGT00390000002200.a.a ENSGT00940000162993 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202.c ENSGT00390000002030.o ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Zebra mbuna MODERN SPECIES 1091 CRTC3 (ENSMZEG00005015859) ENSMZEG00005015848 SERINC4 (ENSMZEG00005015840) hypk (ENSMZEG00005015834) mfap1 (ENSMZEG00005015824) hddc3 (ENSMZEG00005015810) vps33b (ENSMZEG00005015795) prc1b (ENSMZEG00005015741) ptpmt1 (ENSMZEG00005015728) ndufs3 (ENSMZEG00005015705) c1qtnf4 (ENSMZEG00005015697) ENSMZEG00005015677 ENSMZEG00005015666 atp6v0d1 (ENSMZEG00005015650) foxr1 (ENSMZEG00005015635) HACD3 (ENSMZEG00005015600) #22 SLC24A1 (ENSMZEG00005015586) #24 dennd4a (ENSMZEG00005015311) #25 socs4 (ENSMZEG00005015254) wdhd1 (ENSMZEG00005015228) gch1 (ENSMZEG00005015209) SAMD4A (ENSMZEG00005015188) ero1a (ENSMZEG00005015175) pacsin3 (ENSMZEG00005015162) glg1b (ENSMZEG00005015115) TNNI2 (ENSMZEG00005015093) aph1b (ENSMZEG00005015081) OTOG (ENSMZEG00005015041) myod1 (ENSMZEG00005015006) TNNT3 (ENSMZEG00005014820) ENSMZEG00005014810 Eastern happy MODERN SPECIES hypk (ENSACLG00000008131) mfap1 (ENSACLG00000008137) hddc3 (ENSACLG00000008144) vps33b (ENSACLG00000008153) prc1b (ENSACLG00000008191) ptpmt1 (ENSACLG00000008728) ndufs3 (ENSACLG00000008735) c1qtnf4 (ENSACLG00000008747) ENSACLG00000008749 ENSACLG00000008751 ENSACLG00000008756 atp6v0d1 (ENSACLG00000008763) foxr1 (ENSACLG00000008771) ENSACLG00000008774 ENSACLG00000008777 HACD3 (ENSACLG00000008783) #22 SLC24A1 (ENSACLG00000008823) #24 ENSACLG00000008842 dennd4a (ENSACLG00000008854) #25 socs4 (ENSACLG00000009024) wdhd1 (ENSACLG00000009036) gch1 (ENSACLG00000009069) SAMD4A (ENSACLG00000009089) ero1a (ENSACLG00000009207) pacsin3 (ENSACLG00000009240) glg1b (ENSACLG00000009342) tnni2b.1 (ENSACLG00000009427) aph1b (ENSACLG00000009435) OTOG (ENSACLG00000009449) myod1 (ENSACLG00000009487) TNNT3 (ENSACLG00000009498) Burton s mouthbrooder MODERN SPECIES 684 HACD3 (ENSHBUG00000016439) #22 SLC24A1 (ENSHBUG00000016373) #24 dennd4a (ENSHBUG00000016303) #25 socs4 (ENSHBUG00000015873) ENSHBUG00000015846 SAMD4A (ENSHBUG00000015778) gch1 (ENSHBUG00000015632) ero1a (ENSHBUG00000015614) pacsin3 (ENSHBUG00000015595) glg1b (ENSHBUG00000015542) ENSHBUG00000015470 aph1b (ENSHBUG00000015397) OTOG (ENSHBUG00000015356) myod1 (ENSHBUG00000015165) TNNT3 (ENSHBUG00000015184) ENSHBUG00000015145 Lyretail cichlid MODERN SPECIES 412 ENSNBRG00000010692 ENSNBRG00000010669 ENSNBRG00000010640 SERINC4 (ENSNBRG00000010630) hypk (ENSNBRG00000010623) mfap1 (ENSNBRG00000010598) hddc3 (ENSNBRG00000010585) ENSNBRG00000010576 prc1b (ENSNBRG00000010539) ptpmt1 (ENSNBRG00000010529) ndufs3 (ENSNBRG00000010499) c1qtnf4 (ENSNBRG00000010484) ENSNBRG00000010454 atp6v0d1 (ENSNBRG00000010437) ENSNBRG00000010426 HACD3 (ENSNBRG00000010400) #22 SLC24A1 (ENSNBRG00000010383) #24 ENSNBRG00000010370 #25 socs4 (ENSNBRG00000010334) wdhd1 (ENSNBRG00000010071) gch1 (ENSNBRG00000010039) SAMD4A (ENSNBRG00000009997) ero1a (ENSNBRG00000009955) pacsin3 (ENSNBRG00000009877) glg1b (ENSNBRG00000009842) ENSNBRG00000009822 aph1b (ENSNBRG00000009791) OTOG (ENSNBRG00000009698) myod1 (ENSNBRG00000009675) TNNT3 (ENSNBRG00000009613) ENSNBRG00000009599 Nile tilapia MODERN SPECIES uqcrfs1 (ENSONIG00000010416) rasl12 (ENSONIG00000034413) #10 KBTBD13 (ENSONIG00000020976) #11 UBAP1L (ENSONIG00000031699) #12 pdcd7 (ENSONIG00000032653) #13 dbx1a (ENSONIG00000007144) NAV2 (ENSONIG00000007138) e2f8 (ENSONIG00000007135) csrp3 (ENSONIG00000007132) zdhhc13 (ENSONIG00000007127) mpped2a (ENSONIG00000007125) ENSONIG00000007124 ENSONIG00000007114 NR2E3 (ENSONIG00000007109) slc22a18 (ENSONIG00000007107) HACD3 (ENSONIG00000007103) #22 SLC24A1 (ENSONIG00000007099) #24 ENSONIG00000042264 dennd4a (ENSONIG00000007087) #25 socs4 (ENSONIG00000020753) wdhd1 (ENSONIG00000007084) gch1 (ENSONIG00000007079) SAMD4A (ENSONIG00000007076) ero1a (ENSONIG00000007063) ENSONIG00000030911 A3GALT2 (ENSONIG00000039724) A3GALT2 (ENSONIG00000028428) ENSONIG00000034309 A3GALT2 (ENSONIG00000028598) A3GALT2 (ENSONIG00000039361) ENSONIG00000007167 Midas cichlid MODERN SPECIES 964 HACD3 (ENSACIG00000021659) #22 SLC24A1 (ENSACIG00000021640) #24 dennd4a (ENSACIG00000021585) #25 socs4 (ENSACIG00000021569) wdhd1 (ENSACIG00000021530) gch1 (ENSACIG00000021478) SAMD4A (ENSACIG00000021444) ero1a (ENSACIG00000021417) pacsin3 (ENSACIG00000021397) glg1b (ENSACIG00000021354) TNNI2 (ENSACIG00000021349) Pomacentridae ANCESTRAL SPECIES 15 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a.p ENSGT00390000007681.b.a.a.o ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Pomacentridae_A ANCESTRAL SPECIES 66 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a.p ENSGT00390000007681.b.a.a.o ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b Amphiprion ANCESTRAL SPECIES 42 ENSGT00940000180696 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00940000177702.a.a ENSGT00390000007681.b.a.a.o ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT00390000002200.a.a ENSGT00940000162993 ENSGT00940000163460.a.a.a.a ENSGT00980000199380.a.b ENSGT00960000186692 ENSGT00940000158477.a.a Clown anemonefish MODERN SPECIES 1463 ttll3 (ENSAOCG00000017591) BHLHE40 (ENSAOCG00000017607) ITPR1 (ENSAOCG00000017775) sumf1 (ENSAOCG00000017802) ENSAOCG00000017812 NR2E3 (ENSAOCG00000017874) slc22a18 (ENSAOCG00000001258) HACD3 (ENSAOCG00000017961) #22 SLC24A1 (ENSAOCG00000001271) #24 dennd4a (ENSAOCG00000018094) #25 socs4 (ENSAOCG00000001283) wdhd1 (ENSAOCG00000018123) gch1 (ENSAOCG00000018136) Orange clownfish MODERN SPECIES slc6a5 (ENSAPEG00000000138) prmt3 (ENSAPEG00000000139) htatip2 (ENSAPEG00000000140) dbx1a (ENSAPEG00000000141) NAV2 (ENSAPEG00000000142) ENSAPEG00000000143 e2f8 (ENSAPEG00000000144) csrp3 (ENSAPEG00000000145) zdhhc13 (ENSAPEG00000000146) ENSAPEG00000000147 mpped2a (ENSAPEG00000000148) ENSAPEG00000000149 ENSAPEG00000000150 NR2E3 (ENSAPEG00000000151) slc22a18 (ENSAPEG00000000152) HACD3 (ENSAPEG00000000153) #22 SLC24A1 (ENSAPEG00000000154) #24 dennd4a (ENSAPEG00000000155) #25 socs4 (ENSAPEG00000000156) wdhd1 (ENSAPEG00000000157) gch1 (ENSAPEG00000000158) SAMD4A (ENSAPEG00000000159) ero1a (ENSAPEG00000000160) pacsin3 (ENSAPEG00000000161) ENSAPEG00000000162 glg1b (ENSAPEG00000000163) atp6v0d1 (ENSAPEG00000000164) foxr1 (ENSAPEG00000000165) ENSAPEG00000000166 ENSAPEG00000000167 ENSAPEG00000000168 Spiny chromis MODERN SPECIES 475 ENSAPOG00000001388 ENSAPOG00000001400 NR2E3 (ENSAPOG00000001413) slc22a18 (ENSAPOG00000001425) HACD3 (ENSAPOG00000001430) #22 SLC24A1 (ENSAPOG00000001442) #24 dennd4a (ENSAPOG00000001522) #25 ENSAPOG00000001540 socs4 (ENSAPOG00000001542) wdhd1 (ENSAPOG00000001560) gch1 (ENSAPOG00000001570) SAMD4A (ENSAPOG00000001579) ero1a (ENSAPOG00000001586) pacsin3 (ENSAPOG00000001600) Bicolor damselfish MODERN SPECIES 1231 mpped2a (ENSSPAG00000017134) ENSSPAG00000017142 ENSSPAG00000017160 NR2E3 (ENSSPAG00000017198) NR2E3 (ENSSPAG00000017228) slc22a18 (ENSSPAG00000017246) HACD3 (ENSSPAG00000017283) #22 ENSSPAG00000017319 #24 Percomorphaceae_C ANCESTRAL SPECIES 11 ENSGT00940000163467.a.b.b.a.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Eupercaria ANCESTRAL SPECIES 14 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Tetraodontidae ANCESTRAL SPECIES 4 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Fugu MODERN SPECIES 4 ENSTRUG00000020682 NELL1 (ENSTRUG00000016017) slc6a5 (ENSTRUG00000015944) prmt3 (ENSTRUG00000015904) htatip2 (ENSTRUG00000015893) dbx1a (ENSTRUG00000015886) NAV2 (ENSTRUG00000027383) e2f8 (ENSTRUG00000015792) csrp3 (ENSTRUG00000015766) zdhhc13 (ENSTRUG00000015707) mpped2a (ENSTRUG00000015686) ENSTRUG00000020949 ENSTRUG00000015637 NR2E3 (ENSTRUG00000015582) slc22a18 (ENSTRUG00000015561) HACD3 (ENSTRUG00000015510) #22 SLC24A1 (ENSTRUG00000015482) #24 dennd4a (ENSTRUG00000015436) #25 socs4 (ENSTRUG00000015433) wdhd1 (ENSTRUG00000015390) gch1 (ENSTRUG00000015367) SAMD4A (ENSTRUG00000015288) ero1a (ENSTRUG00000015220) pacsin3 (ENSTRUG00000015184) glg1b (ENSTRUG00000015083) tnni2b.1 (ENSTRUG00000015041) aph1b (ENSTRUG00000014985) myod1 (ENSTRUG00000014891) TNNT3 (ENSTRUG00000014861) ENSTRUG00000021513 ENSTRUG00000031897 Tetraodon MODERN SPECIES 20 ENSTNIG00000000788 lrp4 (ENSTNIG00000009608) NELL1 (ENSTNIG00000009609) slc6a5 (ENSTNIG00000009610) prmt3 (ENSTNIG00000009611) htatip2 (ENSTNIG00000009612) dbx1a (ENSTNIG00000009613) NAV2 (ENSTNIG00000009614) e2f8 (ENSTNIG00000009615) csrp3 (ENSTNIG00000009616) zdhhc13 (ENSTNIG00000002121) mpped2a (ENSTNIG00000005247) ENSTNIG00000005152 ENSTNIG00000005151 NR2E3 (ENSTNIG00000005150) HACD3 (ENSTNIG00000001644) #22 SLC24A1 (ENSTNIG00000018806) #24 dennd4a (ENSTNIG00000018805) #25 socs4 (ENSTNIG00000002432) wdhd1 (ENSTNIG00000018803) gch1 (ENSTNIG00000018802) SAMD4A (ENSTNIG00000018801) ero1a (ENSTNIG00000018800) pacsin3 (ENSTNIG00000018799) glg1b (ENSTNIG00000018797) tnni2b.1 (ENSTNIG00000018796) aph1b (ENSTNIG00000018795) OTOG (ENSTNIG00000018794) myod1 (ENSTNIG00000018793) TNNT3 (ENSTNIG00000018792) ENSTNIG00000018791 Eupecaria_A ANCESTRAL SPECIES 15 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Ballan wrasse MODERN SPECIES 142 ENSLBEG00000024342 ENSLBEG00000024389 NR2E3 (ENSLBEG00000024468) slc22a18 (ENSLBEG00000024489) HACD3 (ENSLBEG00000024570) #22 SLC24A1 (ENSLBEG00000024638) #24 dennd4a (ENSLBEG00000024700) #25 socs4 (ENSLBEG00000024771) wdhd1 (ENSLBEG00000024847) gch1 (ENSLBEG00000024950) SAMD4A (ENSLBEG00000025062) ero1a (ENSLBEG00000025153) pacsin3 (ENSLBEG00000025230) glg1b (ENSLBEG00000025302) tnni2b.1 (ENSLBEG00000025369) aph1b (ENSLBEG00000025401) ENSLBEG00000025428 ENSLBEG00000025444 ENSLBEG00000025461 myod1 (ENSLBEG00000025479) Eupecaria_B ANCESTRAL SPECIES 15 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Eupecaria_C ANCESTRAL SPECIES 11 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Gilthead seabream MODERN SPECIES 18 ENSSAUG00010010809 ENSSAUG00010010810 slc6a5 (ENSSAUG00010010819) prmt3 (ENSSAUG00010011691) htatip2 (ENSSAUG00010011716) dbx1a (ENSSAUG00010011720) NAV2 (ENSSAUG00010011732) e2f8 (ENSSAUG00010011743) csrp3 (ENSSAUG00010011751) zdhhc13 (ENSSAUG00010011756) mpped2a (ENSSAUG00010011765) ENSSAUG00010011775 ENSSAUG00010011783 NR2E3 (ENSSAUG00010011796) slc22a18 (ENSSAUG00010011801) HACD3 (ENSSAUG00010011805) #22 SLC24A1 (ENSSAUG00010011812) #24 dennd4a (ENSSAUG00010011836) #25 GFUS (ENSSAUG00010012034) socs4 (ENSSAUG00010012526) wdhd1 (ENSSAUG00010012535) gch1 (ENSSAUG00010012542) SAMD4A (ENSSAUG00010012545) ero1a (ENSSAUG00010012573) pacsin3 (ENSSAUG00010012825) glg1b (ENSSAUG00010012845) TNNI2 (ENSSAUG00010012899) aph1b (ENSSAUG00010012901) myod1 (ENSSAUG00010012905) TNNT3 (ENSSAUG00010012907) ENSSAUG00010012908 Eupercaria_incertae_sedis ANCESTRAL SPECIES 7 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a European seabass MODERN SPECIES 18 ENSDLAG00005012301 slc6a5 (ENSDLAG00005012316) prmt3 (ENSDLAG00005012846) htatip2 (ENSDLAG00005012965) dbx1a (ENSDLAG00005012977) NAV2 (ENSDLAG00005013065) e2f8 (ENSDLAG00005015998) csrp3 (ENSDLAG00005032855) zdhhc13 (ENSDLAG00005016050) mpped2a (ENSDLAG00005017487) ENSDLAG00005026438 ENSDLAG00005031744 ENSDLAG00005017548 ENSDLAG00005017617 ENSDLAG00005030198 HACD3 (ENSDLAG00005032938) #22 SLC24A1 (ENSDLAG00005029857) #24 DENND4A (ENSDLAG00005017811) #25 socs4 (ENSDLAG00005031594) wdhd1 (ENSDLAG00005018377) gch1 (ENSDLAG00005031132) SAMD4A (ENSDLAG00005018542) ero1a (ENSDLAG00005018493) ENSDLAG00005018657 ENSDLAG00005018712 ENSDLAG00005019543 ENSDLAG00005026766 ENSDLAG00005019564 ENSDLAG00005034786 ENSDLAG00005019645 ENSDLAG00005019721 Large yellow croaker MODERN SPECIES 480 zgc:194679 (ENSLCRG00005019441) zgc:194679 (ENSLCRG00005019443) ENSLCRG00005019444 htatip2 (ENSLCRG00005019446) dbx1a (ENSLCRG00005019448) NAV2 (ENSLCRG00005019450) ENSLCRG00005019452 e2f8 (ENSLCRG00005002371) zdhhc13 (ENSLCRG00005002405) csrp3 (ENSLCRG00005002604) mpped2a (ENSLCRG00005002608) ENSLCRG00005002609 ENSLCRG00005002613 NR2E3 (ENSLCRG00005002635) slc22a18 (ENSLCRG00005002671) HACD3 (ENSLCRG00005002710) #22 SLC24A1 (ENSLCRG00005002811) #24 dennd4a (ENSLCRG00005002845) #25 socs4 (ENSLCRG00005002924) gch1 (ENSLCRG00005002929) SAMD4A (ENSLCRG00005002932) ero1a (ENSLCRG00005002944) pacsin3 (ENSLCRG00005002960) glg1b (ENSLCRG00005002969) tnni2b.1 (ENSLCRG00005003007) aph1b (ENSLCRG00005003009) aph1b (ENSLCRG00005003014) OTOG (ENSLCRG00005003017) nqo1 (ENSLCRG00005003029) ENSLCRG00005003039 ENSLCRG00005003042 Perciformes ANCESTRAL SPECIES 15 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Cottioidei ANCESTRAL SPECIES 13 ENSGT00940000158287 ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00390000006548.a.a ENSGT00940000155628 ENSGT00940000155889.c ENSGT00940000156684 ENSGT00940000158166 ENSGT00940000156476.g ENSGT00940000154905.i.a ENSGT00390000014038 ENSGT00940000159572.a.a ENSGT00390000008748.b.g.b ENSGT00390000005300 ENSGT00940000154617.B.c ENSGT00400000022240 ENSGT00940000157859.a.a Lumpfish MODERN SPECIES 18 ENSCLMG00005000542 NELL1 (ENSCLMG00005000055) slc6a5 (ENSCLMG00005022683) prmt3 (ENSCLMG00005022681) htatip2 (ENSCLMG00005022680) dbx1a (ENSCLMG00005022679) NAV2 (ENSCLMG00005022639) e2f8 (ENSCLMG00005022617) csrp3 (ENSCLMG00005022611) zdhhc13 (ENSCLMG00005022516) mpped2a (ENSCLMG00005022511) ENSCLMG00005022510 ENSCLMG00005022507 NR2E3 (ENSCLMG00005022505) slc22a18 (ENSCLMG00005022504) HACD3 (ENSCLMG00005022503) #22 SLC24A1 (ENSCLMG00005022502) #24 rps17 (ENSCLMG00005022501) csnk1g1 (ENSCLMG00005022489) SNX1 (ENSCLMG00005022487) neo1a (ENSCLMG00005021604) bbs4 (ENSCLMG00005021449) scamp2l (ENSCLMG00005021422) myo9aa (ENSCLMG00005021366) senp8 (ENSCLMG00005021352) znf609b (ENSCLMG00005021349) trip4 (ENSCLMG00005021348) chrna7a (ENSCLMG00005021344) ENSCLMG00005021343 calml4a (ENSCLMG00005021342) ADAMTS7 (ENSCLMG00005021336) Stickleback MODERN SPECIES 1 A3GALT2 (ENSGACG00000017105) lrp4 (ENSGACG00000017100) NELL1 (ENSGACG00000017098) slc6a5 (ENSGACG00000017096) prmt3 (ENSGACG00000017094) htatip2 (ENSGACG00000017092) NAV2 (ENSGACG00000017087) e2f8 (ENSGACG00000017086) csrp3 (ENSGACG00000017082) zdhhc13 (ENSGACG00000017075) mpped2a (ENSGACG00000017073) ENSGACG00000017072 ENSGACG00000017063 NR2E3 (ENSGACG00000017060) slc22a18 (ENSGACG00000017056) HACD3 (ENSGACG00000017047) #22 SLC24A1 (ENSGACG00000017046) #24 rps17 (ENSGACG00000017042) csnk1g1 (ENSGACG00000017038) SNX1 (ENSGACG00000017034) neo1a (ENSGACG00000017030) bbs4 (ENSGACG00000017021) scamp2l (ENSGACG00000017012) myo9aa (ENSGACG00000017000) senp8 (ENSGACG00000016997) GRAMD2A (ENSGACG00000016994) znf609b (ENSGACG00000016992) trip4 (ENSGACG00000016986) chrna7a (ENSGACG00000016966) cln6a (ENSGACG00000016961) calml4a (ENSGACG00000016957) Perciformes_a ANCESTRAL SPECIES 13 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Pike perch MODERN SPECIES 42 ENSSLUG00000012834 slc6a5 (ENSSLUG00000012844) prmt3 (ENSSLUG00000012890) ENSSLUG00000013285 htatip2 (ENSSLUG00000013292) dbx1a (ENSSLUG00000013296) e2f8 (ENSSLUG00000013361) csrp3 (ENSSLUG00000013375) zdhhc13 (ENSSLUG00000013411) slc18b1 (ENSSLUG00000014147) mpped2a (ENSSLUG00000014219) ENSSLUG00000014232 ENSSLUG00000014234 NR2E3 (ENSSLUG00000014245) slc22a18 (ENSSLUG00000014266) HACD3 (ENSSLUG00000014295) #22 SLC24A1 (ENSSLUG00000014312) #24 dennd4a (ENSSLUG00000014340) #25 socs4 (ENSSLUG00000014357) wdhd1 (ENSSLUG00000014371) gch1 (ENSSLUG00000014411) SAMD4A (ENSSLUG00000014423) ero1a (ENSSLUG00000014452) pacsin3 (ENSSLUG00000014868) glg1b (ENSSLUG00000014927) tnni2b.1 (ENSSLUG00000015288) aph1b (ENSSLUG00000015292) OTOG (ENSSLUG00000015304) myod1 (ENSSLUG00000015360) TNNT3 (ENSSLUG00000015377) ENSSLUG00000015385 Channel bull blenny MODERN SPECIES 17 ENSCGOG00000001259 slc6a5 (ENSCGOG00000001258) prmt3 (ENSCGOG00000001228) htatip2 (ENSCGOG00000001220) dbx1a (ENSCGOG00000001219) ENSCGOG00000001218 NAV2 (ENSCGOG00000001167) e2f8 (ENSCGOG00000001160) csrp3 (ENSCGOG00000001159) zdhhc13 (ENSCGOG00000001121) mpped2a (ENSCGOG00000001116) ENSCGOG00000001115 ENSCGOG00000001114 NR2E3 (ENSCGOG00000001111) slc22a18 (ENSCGOG00000001108) HACD3 (ENSCGOG00000001094) #22 SLC24A1 (ENSCGOG00000001085) #24 dennd4a (ENSCGOG00000000880) #25 socs4 (ENSCGOG00000000851) wdhd1 (ENSCGOG00000000697) gch1 (ENSCGOG00000000646) SAMD4A (ENSCGOG00000000470) ero1a (ENSCGOG00000000411) pacsin3 (ENSCGOG00000000368) glg1b (ENSCGOG00000000287) tnni2b.1 (ENSCGOG00000000244) aph1b (ENSCGOG00000000232) OTOG (ENSCGOG00000000174) myod1 (ENSCGOG00000000126) TNNT3 (ENSCGOG00000000102) ENSCGOG00000000089 Percomorphaceae_D ANCESTRAL SPECIES 11 ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Anabantaria ANCESTRAL SPECIES 11 ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000181004 ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568.l ENSGT00390000017790 ENSGT00390000006347.a Anabantoidei ANCESTRAL SPECIES 8 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00940000163723.A.f.b ENSGT00940000163723.A.e ENSGT00940000155568.l ENSGT00390000017790 ENSGT00390000006347.a Climbing perch MODERN SPECIES 16 ENSATEG00000021458 NELL1 (ENSATEG00000021543) ENSATEG00000021560 slc6a5 (ENSATEG00000021586) prmt3 (ENSATEG00000021598) htatip2 (ENSATEG00000021609) dbx1a (ENSATEG00000021616) NAV2 (ENSATEG00000021634) csrp3 (ENSATEG00000021724) zdhhc13 (ENSATEG00000021742) mpped2a (ENSATEG00000021765) ENSATEG00000021774 ENSATEG00000021798 ENSATEG00000021837 ENSATEG00000021851 HACD3 (ENSATEG00000021866) #22 SLC24A1 (ENSATEG00000021887) #24 DENND4A (ENSATEG00000021908) #25 socs4 (ENSATEG00000021970) wdhd1 (ENSATEG00000021986) gch1 (ENSATEG00000022027) SAMD4A (ENSATEG00000022040) ero1a (ENSATEG00000022081) ENSATEG00000022101 ENSATEG00000022132 ENSATEG00000022204 ENSATEG00000022233 ENSATEG00000022248 ENSATEG00000022262 ENSATEG00000022291 ENSATEG00000022355 Zig-zag eel MODERN SPECIES 17 NELL1 (ENSMAMG00000015789) slc6a5 (ENSMAMG00000015848) prmt3 (ENSMAMG00000015896) htatip2 (ENSMAMG00000015926) dbx1a (ENSMAMG00000015940) ENSMAMG00000016183 NAV2 (ENSMAMG00000015959) e2f8 (ENSMAMG00000016200) csrp3 (ENSMAMG00000016232) zdhhc13 (ENSMAMG00000016250) mpped2a (ENSMAMG00000016266) ENSMAMG00000026458 ENSMAMG00000016336 ENSMAMG00000016434 ENSMAMG00000016453 HACD3 (ENSMAMG00000016477) #22 SLC24A1 (ENSMAMG00000016511) #24 DENND4A (ENSMAMG00000016577) #25 socs4 (ENSMAMG00000016740) wdhd1 (ENSMAMG00000016742) gch1 (ENSMAMG00000016761) SAMD4A (ENSMAMG00000016799) ero1a (ENSMAMG00000016859) ENSMAMG00000016868 ENSMAMG00000016896 TNNI2 (ENSMAMG00000027039) ENSMAMG00000016992 ENSMAMG00000017001 ENSMAMG00000017043 ENSMAMG00000017073 ENSMAMG00000017121 Carangaria ANCESTRAL SPECIES 11 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Carangaria_A ANCESTRAL SPECIES 19 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00960000186692 Seriola ANCESTRAL SPECIES 30 ENSGT00940000158287 ENSGT00940000163467.a.b.b.a.b ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Greater amberjack MODERN SPECIES 3 ENSSDUG00000015986 ENSSDUG00000015990 slc6a5 (ENSSDUG00000016016) prmt3 (ENSSDUG00000016148) htatip2 (ENSSDUG00000016210) dbx1a (ENSSDUG00000016225) NAV2 (ENSSDUG00000016252) e2f8 (ENSSDUG00000016327) csrp3 (ENSSDUG00000016350) zdhhc13 (ENSSDUG00000016374) mpped2a (ENSSDUG00000016439) ENSSDUG00000016457 ENSSDUG00000016485 NR2E3 (ENSSDUG00000016573) slc22a18 (ENSSDUG00000016604) HACD3 (ENSSDUG00000016623) #22 SLC24A1 (ENSSDUG00000016668) #24 dennd4a (ENSSDUG00000016708) #25 socs4 (ENSSDUG00000016907) wdhd1 (ENSSDUG00000016996) gch1 (ENSSDUG00000017494) SAMD4A (ENSSDUG00000017510) ENSSDUG00000017549 ero1a (ENSSDUG00000017566) pacsin3 (ENSSDUG00000017630) glg1b (ENSSDUG00000017681) ENSSDUG00000017775 aph1b (ENSSDUG00000017793) OTOG (ENSSDUG00000017868) myod1 (ENSSDUG00000018276) TNNT3 (ENSSDUG00000018283) Yellowtail amberjack MODERN SPECIES 2727 ENSSLDG00000010099 ENSSLDG00000010070 e2f8 (ENSSLDG00000010036) csrp3 (ENSSLDG00000009998) zdhhc13 (ENSSLDG00000009964) mpped2a (ENSSLDG00000009935) ENSSLDG00000009928 ENSSLDG00000009903 NR2E3 (ENSSLDG00000009890) slc22a18 (ENSSLDG00000009860) HACD3 (ENSSLDG00000009809) #22 SLC24A1 (ENSSLDG00000009764) #24 Barramundi perch MODERN SPECIES 96 NELL1 (ENSLCAG00010017942) slc6a5 (ENSLCAG00010017918) prmt3 (ENSLCAG00010017909) htatip2 (ENSLCAG00010017906) dbx1a (ENSLCAG00010017904) ENSLCAG00010017900 NAV2 (ENSLCAG00010017798) e2f8 (ENSLCAG00010017767) csrp3 (ENSLCAG00010017763) zdhhc13 (ENSLCAG00010017744) mpped2a (ENSLCAG00010017716) ENSLCAG00010017710 ENSLCAG00010017694 NR2E3 (ENSLCAG00010017688) slc22a18 (ENSLCAG00010017678) HACD3 (ENSLCAG00010017676) #22 SLC24A1 (ENSLCAG00010017673) #24 dennd4a (ENSLCAG00010017670) #25 socs4 (ENSLCAG00010017668) wdhd1 (ENSLCAG00010017654) gch1 (ENSLCAG00010017650) SAMD4A (ENSLCAG00010017642) ero1a (ENSLCAG00010017638) pacsin3 (ENSLCAG00010017636) glg1b (ENSLCAG00010017596) tnni2b.1 (ENSLCAG00010017526) aph1b (ENSLCAG00010017523) OTOG (ENSLCAG00010017486) myod1 (ENSLCAG00010017465) TNNT3 (ENSLCAG00010017455) ENSLCAG00010017452 Pleuronectoidei ANCESTRAL SPECIES 39 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000154963 ENSGT00940000156825 ENSGT00390000008184 ENSGT00950000183093.B.a.b ENSGT00940000155663.f.b ENSGT00940000158651 ENSGT00940000159533 ENSGT00530000063074.b.a ENSGT00390000007681.b.a.a ENSGT00940000160967.f ENSGT00940000153246.a.a.a.d ENSGT00940000156926.d ENSGT00940000160333 ENSGT00530000062962.b.a.e #22 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000166202 ENSGT00390000002030 ENSGT00390000013481.c.a ENSGT00940000157933 ENSGT00390000007753.b ENSGT00950000182973.b.a ENSGT00390000011262.e.b ENSGT01030000234588.b.b.b.b.a.b.b ENSGT00390000002049.c.b ENSGT00940000157490 ENSGT00950000182959.b.b.e.b ENSGT00940000158477.a.a ENSGT00940000153901.a.b.a Tongue sole MODERN SPECIES 20 NELL1 (ENSCSEG00000019419) slc6a5 (ENSCSEG00000019410) prmt3 (ENSCSEG00000019404) htatip2 (ENSCSEG00000019402) dbx1a (ENSCSEG00000019398) ENSCSEG00000019395 NAV2 (ENSCSEG00000019359) e2f8 (ENSCSEG00000019335) csrp3 (ENSCSEG00000019333) zdhhc13 (ENSCSEG00000019323) mpped2a (ENSCSEG00000019316) ENSCSEG00000019314 ENSCSEG00000019294 NR2E3 (ENSCSEG00000019282) slc22a18 (ENSCSEG00000019279) HACD3 (ENSCSEG00000019267) #22 SLC24A1 (ENSCSEG00000019249) #24 dennd4a (ENSCSEG00000019190) #25 socs4 (ENSCSEG00000019179) lipca (ENSCSEG00000019171) aqp9b (ENSCSEG00000019167) aldh1a2 (ENSCSEG00000019151) polr2m (ENSCSEG00000019146) ENSCSEG00000019136 CGNL1 (ENSCSEG00000019127) TCF12 (ENSCSEG00000019074) ENSCSEG00000018996 ENSCSEG00000018989 tex9 (ENSCSEG00000018980) ENSCSEG00000018971 nedd4a (ENSCSEG00000018946) Turbot MODERN SPECIES 17 NELL1 (ENSSMAG00000008339) slc6a5 (ENSSMAG00000008312) prmt3 (ENSSMAG00000008265) ENSSMAG00000008258 htatip2 (ENSSMAG00000008235) dbx1a (ENSSMAG00000023716) NAV2 (ENSSMAG00000008150) e2f8 (ENSSMAG00000008106) csrp3 (ENSSMAG00000008056) zdhhc13 (ENSSMAG00000008013) mpped2a (ENSSMAG00000033645) ENSSMAG00000007996 ENSSMAG00000007972 ENSSMAG00000007954 ENSSMAG00000007929 HACD3 (ENSSMAG00000007882) #22 SLC24A1 (ENSSMAG00000007857) #24 DENND4A (ENSSMAG00000007433) #25 wdhd1 (ENSSMAG00000007346) ENSSMAG00000034634 SAMD4A (ENSSMAG00000007254) ero1a (ENSSMAG00000007207) ENSSMAG00000007168 ENSSMAG00000006788 ENSSMAG00000006609 ENSSMAG00000006568 ENSSMAG00000027873 ENSSMAG00000006529 ENSSMAG00000006392 ENSSMAG00000006376 ENSSMAG00000006344 Pinecone sodierfish MODERN SPECIES 17 NELL1 (ENSMMDG00005000287) slc6a5 (ENSMMDG00005000196) prmt3 (ENSMMDG00005000132) htatip2 (ENSMMDG00005000108) dbx1a (ENSMMDG00005000101) ENSMMDG00005023868 NAV2 (ENSMMDG00005023843) e2f8 (ENSMMDG00005023830) csrp3 (ENSMMDG00005023826) zdhhc13 (ENSMMDG00005023737) mpped2a (ENSMMDG00005023721) ENSMMDG00005023717 ENSMMDG00005023712 NR2E3 (ENSMMDG00005023708) slc22a18 (ENSMMDG00005023705) HACD3 (ENSMMDG00005023685) #22 SLC24A1 (ENSMMDG00005023674) #24 dennd4a (ENSMMDG00005023619) #25 socs4 (ENSMMDG00005023589) wdhd1 (ENSMMDG00005023579) gch1 (ENSMMDG00005023576) SAMD4A (ENSMMDG00005023575) ero1a (ENSMMDG00005023412) pacsin3 (ENSMMDG00005023408) ENSMMDG00005023407 c1qtnf4 (ENSMMDG00005023405) ndufs3 (ENSMMDG00005023404) ENSMMDG00005023401 ENSMMDG00005023400 ndufs3 (ENSMMDG00005023382) ptpmt1 (ENSMMDG00005023376) Cod MODERN SPECIES 5 ENSGMOG00000009277 NELL1 (ENSGMOG00000031363) slc6a5 (ENSGMOG00000002626) prmt3 (ENSGMOG00000002570) htatip2 (ENSGMOG00000002550) dbx1a (ENSGMOG00000002488) ENSGMOG00000028982 e2f8 (ENSGMOG00000019253) csrp3 (ENSGMOG00000019248) zdhhc13 (ENSGMOG00000019229) mpped2a (ENSGMOG00000027425) ENSGMOG00000032770 ENSGMOG00000019198 ENSGMOG00000019194 ENSGMOG00000019185 HACD3 (ENSGMOG00000019175) #22 SLC24A1 (ENSGMOG00000026384) #24 DENND4A (ENSGMOG00000026888) #25 ENSGMOG00000027242 socs4 (ENSGMOG00000017366) wdhd1 (ENSGMOG00000017373) gch1 (ENSGMOG00000013855) SAMD4A (ENSGMOG00000010970) ero1a (ENSGMOG00000008393) ENSGMOG00000008409 ENSGMOG00000026469 c1qtnf4 (ENSGMOG00000029444) ENSGMOG00000003400 ptpmt1 (ENSGMOG00000029620) prc1b (ENSGMOG00000003427) vps33b (ENSGMOG00000003457) Otomorpha ANCESTRAL SPECIES 729 ENSGT00530000062962.b.a.e #22 ENSGT00940000160694.g.b ENSGT00530000063106.A.s.a.a ##28 Otophysi ANCESTRAL SPECIES 555 ENSGT00530000062962.b.a.e #22 ENSGT00940000160694.g.b ENSGT00530000063106.A.s.a.a ##28 Characiphysae ANCESTRAL SPECIES 131 ENSGT00390000004737.b.a ENSGT00550000074828.a ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00530000062962.b.a.e #22 ENSGT00940000160694.g.b ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a.e ENSGT00940000158136 ENSGT00390000005535 ENSGT00940000164949 ENSGT00950000182838.A.a.b ENSGT00940000156076.a.a.a.a.c ENSGT00940000163235.A.a.b ENSGT01040000240607 ENSGT00940000156076.a.a.a.a.d.b ENSGT00940000163235.A.a.a.b ENSGT00390000013104 ENSGT00390000013315 Channel catfish MODERN SPECIES 1 uchl5 (ENSIPUG00000017083) GLRX2 (ENSIPUG00000017204) B3GALT2 (ENSIPUG00000017220) cfhl1 (ENSIPUG00000017233) ENSIPUG00000017271 ENSIPUG00000017301 ENSIPUG00000017310 ENSIPUG00000017358 syt7b (ENSIPUG00000017371) sdhaf2 (ENSIPUG00000017397) CPSF7 (ENSIPUG00000017425) polr2l (ENSIPUG00000017431) ENSIPUG00000017455 DAGLA (ENSIPUG00000017462) arih1 (ENSIPUG00000017512) ENSIPUG00000017616 #22 helz2c (ENSIPUG00000017627) cmtr2 (ENSIPUG00000017648) calb2 (ENSIPUG00000017673) slc38a7 (ENSIPUG00000017796) MRPL21 (ENSIPUG00000017862) ENSIPUG00000017892 ap2a2 (ENSIPUG00000017908) ENSIPUG00000018000 ENSIPUG00000018032 ENSIPUG00000018228 ENSIPUG00000018239 ENSIPUG00000018257 tollip (ENSIPUG00000018263) slc35c1 (ENSIPUG00000018276) MAPK8IP1 (ENSIPUG00000018285) Characiphysae_b ANCESTRAL SPECIES 4 ENSGT00390000007252.d ENSGT00940000158143 ENSGT00940000164952 ENSGT00940000159206.b ENSGT01090000260005.a.b.b ENSGT00940000157398.i.a ENSGT00950000182841.b.a.b.a.b ENSGT00390000004737.b.a ENSGT00550000074828.a ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00530000062962.b.a.e #22 ENSGT00940000160694.g.b ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00950000183082.a.e ENSGT00940000158136 ENSGT00390000005535 ENSGT00940000164949 ENSGT00950000182838.A.a.b ENSGT00940000156076.a.a.a.a.c ENSGT00940000163235.A.a.b ENSGT01040000240607 ENSGT00940000156076.a.a.a.a.d.b ENSGT00940000163235.A.a.a.b ENSGT00390000013104 ENSGT00390000013315 Electric eel MODERN SPECIES 26 si:ch211-107o10.3 (ENSEEEG00000001145) ZNF710 (ENSEEEG00000001148) serf2a (ENSEEEG00000001149) katnb1 (ENSEEEG00000001158) tmem208 (ENSEEEG00000001232) si:ch211-122f10.4 (ENSEEEG00000001234) saa (ENSEEEG00000001235) rplp2l (ENSEEEG00000001238) ENSEEEG00000001239 syt7b (ENSEEEG00000001240) sdhaf2 (ENSEEEG00000001242) CPSF7 (ENSEEEG00000001243) polr2l (ENSEEEG00000001244) DAGLA (ENSEEEG00000001245) arih1l (ENSEEEG00000001248) HACD3 (ENSEEEG00000001258) #22 ENSEEEG00000001259 ddx42 (ENSEEEG00000001260) strada (ENSEEEG00000001262) rnf113a (ENSEEEG00000001278) ENSEEEG00000001294 snrnp70 (ENSEEEG00000001295) lin7b (ENSEEEG00000001296) zgc:193811 (ENSEEEG00000001308) kcnc3a (ENSEEEG00000001309) vat1 (ENSEEEG00000001311) ENSEEEG00000001312 asb16 (ENSEEEG00000001314) tmub2 (ENSEEEG00000001315) atxn7l3a (ENSEEEG00000001319) ubtf (ENSEEEG00000001321) Characoidei ANCESTRAL SPECIES 18 ENSGT00390000007252.d ENSGT00940000158143 ENSGT00940000164952 ENSGT00940000159206.b ENSGT01090000260005.a.b.b ENSGT00940000157398.i.a ENSGT00950000182841.b.a.b.a.b ENSGT00550000074828.a ENSGT00940000165631.g.a ENSGT00940000157180.b ENSGT00390000001149 ENSGT00730000110905.a ENSGT00390000007087 ENSGT00940000171027 ENSGT00940000161192 ENSGT00530000062962.b.a.e #22 ENSGT00940000160694.g.b ENSGT00940000161773 ENSGT00950000183108.b.a.a.i.a ENSGT00940000158136 ENSGT00390000005535 ENSGT00940000164949 ENSGT00950000182838.A.a.b Red-bellied piranha MODERN SPECIES 318 lmnl3 (ENSPNAG00000015367) MARCHF3 (ENSPNAG00000015307) gjd6 (ENSPNAG00000015300) sh3gl3a (ENSPNAG00000015270) fth1b (ENSPNAG00000015208) rplp2l (ENSPNAG00000005552) ENSPNAG00000015186 syt7b (ENSPNAG00000015132) sdhaf2 (ENSPNAG00000015086) CPSF7 (ENSPNAG00000015073) polr2l (ENSPNAG00000015066) ENSPNAG00000003356 DAGLA (ENSPNAG00000015052) arih1l (ENSPNAG00000014999) HACD3 (ENSPNAG00000003323) #22 cmtr2 (ENSPNAG00000014909) ENSPNAG00000014889 calb2b (ENSPNAG00000014884) slc38a7 (ENSPNAG00000014864) mrpl21 (ENSPNAG00000003269) ENSPNAG00000014753 AP2A2 (ENSPNAG00000014739) ENSPNAG00000006463 ENSPNAG00000014669 Mexicana tetra MODERN SPECIES 20 ENSAMXG00000037407 ENSAMXG00000034021 ENSAMXG00000041219 ENSAMXG00000040339 ENSAMXG00000039930 rplp2l (ENSAMXG00000033872) ENSAMXG00000033663 ENSAMXG00000042767 syt7b (ENSAMXG00000003329) sdhaf2 (ENSAMXG00000042602) CPSF7 (ENSAMXG00000003296) polr2l (ENSAMXG00000037735) ENSAMXG00000039950 DAGLA (ENSAMXG00000003215) arih1l (ENSAMXG00000003152) ENSAMXG00000030657 #22 ENSAMXG00000040064 ENSAMXG00000031111 ENSAMXG00000043624 cmtr2 (ENSAMXG00000003128) calb2b (ENSAMXG00000036096) slc38a7 (ENSAMXG00000003059) mrpl21 (ENSAMXG00000036794) ENSAMXG00000031349 AP2A2 (ENSAMXG00000002953) abhd2a (ENSAMXG00000038834) rasl12 (ENSAMXG00000002924) #10 KBTBD13 (ENSAMXG00000025781) #11 UBAP1L (ENSAMXG00000042348) #12 pdcd7 (ENSAMXG00000002916) #13 clpxa (ENSAMXG00000002914) #14 Clupeiformes ANCESTRAL SPECIES 763 ENSGT00530000062962.b.a.e #22 ENSGT00940000160694.g.b ENSGT00530000063106.A.s.a.a ##28 Atlantic herring MODERN SPECIES 22 cplx3b (ENSCHAG00000009396) CSK (ENSCHAG00000009425) ENSCHAG00000010220 ENSCHAG00000010256 ##27 ENSCHAG00000010978 ENSCHAG00000011012 #24 ENSCHAG00000011181 ENSCHAG00000011208 #25 ENSCHAG00000011724 GNPAT (ENSCHAG00000011739) ENSCHAG00000011866 zmp:0000001138 (ENSCHAG00000011868) ENSCHAG00000011874 NR2E3 (ENSCHAG00000011882) arih1l (ENSCHAG00000011895) ENSCHAG00000012061 #22 ENSCHAG00000012141 ENSCHAG00000012180 ENSCHAG00000012229 ##28 ENSCHAG00000012262 ENSCHAG00000012284 ENSCHAG00000012323 ENSCHAG00000012353 rhcgl1 (ENSCHAG00000012389) fes (ENSCHAG00000012848) furina (ENSCHAG00000013140) ENSCHAG00000013331 ENSCHAG00000013747 ENSCHAG00000013828 ENSCHAG00000013851 slc39a1 (ENSCHAG00000013858) Clupeocephala ANCESTRAL SPECIES 2 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT01030000234532.B.e.b.e #24 ENSGT00940000155836.B #25 ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000155333.A.a ##27 ENSGT00530000063106.B #28 ENSGT00390000005764 #29 ENSGT00940000157369.b #34 ENSGT00940000165890 ENSGT00940000158146.a #35 Otomorpha ANCESTRAL SPECIES ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Otophysi ANCESTRAL SPECIES 4 ENSGT00940000163703.b ENSGT00940000159811 ENSGT00940000158682 ENSGT00940000154837 ENSGT00530000063553.b.b ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b.i #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Characiphysae ANCESTRAL SPECIES 8 ENSGT00960000187150 ENSGT00940000159811 ENSGT00940000158682 ENSGT00940000154837 ENSGT00530000063553.b.b ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b.i #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Channel catfish MODERN SPECIES 23 cbln1 (ENSIPUG00000020331) ENSIPUG00000020342 n4bp1 (ENSIPUG00000020354) siah1 (ENSIPUG00000020372) lonp2 (ENSIPUG00000020393) il34 (ENSIPUG00000020427) sf3b3 (ENSIPUG00000020435) st3gal2 (ENSIPUG00000020529) aars (ENSIPUG00000020538) ENSIPUG00000020630 pllp (ENSIPUG00000020662) arl2bp (ENSIPUG00000020669) arih1 (ENSIPUG00000020676) c4h15orf39 (ENSIPUG00000021229) ppcdc (ENSIPUG00000021242) hacd3 (ENSIPUG00000021269) #22 vwa9 (ENSIPUG00000021289) #23 slc24a1 (ENSIPUG00000021316) #24 dennd4a (ENSIPUG00000021338) #25 Rab11a (ENSIPUG00000021401) #26 megf11 (ENSIPUG00000021414) ##27 map2k1 (ENSIPUG00000021471) #30 rpl4-b (ENSIPUG00000021502) #32 zwilch (ENSIPUG00000021572) #33 LCTL (ENSIPUG00000021616) #34 snapc5 (ENSIPUG00000021633) #31 SMAD6 (ENSIPUG00000021637) #35 smad3b (ENSIPUG00000021649) #37 AAGAB (ENSIPUG00000021694) iqch (ENSIPUG00000021716) c4h15orf61 (ENSIPUG00000021762) Characiphysae_b ANCESTRAL SPECIES 4 ENSGT00960000187150 ENSGT00940000159811 ENSGT00940000158682 ENSGT00940000154837 ENSGT00530000063553.b.b ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b.i #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Characoidei ANCESTRAL SPECIES 30 ENSGT00940000158492.b ENSGT00940000159811 ENSGT00940000158682 ENSGT00940000154837 ENSGT00530000063553.b.b ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b.i #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Red-bellied piranha MODERN SPECIES znf423 (ENSPNAG00000015599) cbln1 (ENSPNAG00000003394) n4bp1 (ENSPNAG00000015520) siah1 (ENSPNAG00000015510) lonp2 (ENSPNAG00000015490) il34 (ENSPNAG00000015434) sf3b3 (ENSPNAG00000015419) st3gal2 (ENSPNAG00000015314) aars1 (ENSPNAG00000015269) ENSPNAG00000015237 pllp (ENSPNAG00000015182) arl2bp (ENSPNAG00000015169) arih1 (ENSPNAG00000015135) ENSPNAG00000015080 ppcdc (ENSPNAG00000015060) hacd3 (ENSPNAG00000015056) #22 ints14 (ENSPNAG00000015024) #23 SLC24A1 (ENSPNAG00000003338) #24 dennd4a (ENSPNAG00000014917) #25 rab11a (ENSPNAG00000014863) #26 ENSPNAG00000014837 ##27 map2k1 (ENSPNAG00000014728) #30 rpl4 (ENSPNAG00000014698) #32 zwilch (ENSPNAG00000014620) #33 LCTL (ENSPNAG00000003168) #34 snapc5 (ENSPNAG00000014521) #31 smad6b (ENSPNAG00000014508) #35 smad3b (ENSPNAG00000003144) #37 aagab (ENSPNAG00000014473) iqch (ENSPNAG00000014434) zgc:162898 (ENSPNAG00000003117) Mexicana tetra MODERN SPECIES 9 ENSAMXG00000032296 cbln1 (ENSAMXG00000041854) n4bp1 (ENSAMXG00000029866) siah1 (ENSAMXG00000040928) lonp2 (ENSAMXG00000003436) il34 (ENSAMXG00000029682) sf3b3 (ENSAMXG00000003410) st3gal2 (ENSAMXG00000003386) aars1 (ENSAMXG00000003368) ENSAMXG00000003354 pllp (ENSAMXG00000037550) arl2bp (ENSAMXG00000039327) arih1 (ENSAMXG00000003281) ENSAMXG00000003257 ppcdc (ENSAMXG00000038023) hacd3 (ENSAMXG00000036622) #22 ints14 (ENSAMXG00000003207) #23 SLC24A1 (ENSAMXG00000003180) #24 dennd4a (ENSAMXG00000003173) #25 rab11a (ENSAMXG00000003155) #26 ENSAMXG00000003031 ##27 map2k1 (ENSAMXG00000003000) #30 rpl4 (ENSAMXG00000029678) #32 zwilch (ENSAMXG00000042209) #33 LCTL (ENSAMXG00000002915) #34 snapc5 (ENSAMXG00000035746) #31 ENSAMXG00000042016 smad6b (ENSAMXG00000002889) #35 smad3b (ENSAMXG00000002880) #37 aagab (ENSAMXG00000034247) iqch (ENSAMXG00000002847) Electric eel MODERN SPECIES 655 ppcdc (ENSEEEG00000022669) hacd3 (ENSEEEG00000022666) #22 ints14 (ENSEEEG00000022663) #23 SLC24A1 (ENSEEEG00000022661) #24 dennd4a (ENSEEEG00000022659) #25 rab11a (ENSEEEG00000022658) #26 ENSEEEG00000022657 ENSEEEG00000022655 ##27 map2k1 (ENSEEEG00000022402) #30 slc28a1 (ENSEEEG00000022360) ENSEEEG00000022359 ENSEEEG00000022358 Cyprinoidei ANCESTRAL SPECIES 10 ENSGT00940000163703.b ENSGT00940000159811 ENSGT00940000158682 ENSGT00940000154837 ENSGT00530000063553.b.b ENSGT00940000168336 ENSGT00950000183151.a.a.b.b ENSGT00940000156356 ENSGT00940000157335 ENSGT01050000244866.C ENSGT00940000156011 ENSGT00390000015052 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b.i #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 123 ENSGT00940000163703.b.c ENSGT00940000159811.h ENSGT00940000158682.c ENSGT00940000154837.k ENSGT00530000063553.b.b.d ENSGT00940000168336.c ENSGT00950000183151.a.a.b.b.i ENSGT00940000156356.d ENSGT00940000157335.l ENSGT01050000244866.C.b ENSGT00940000156011.`b ENSGT00390000015052.b ENSGT00940000155744.g.a ENSGT00940000169185.a ENSGT00440000038107.o ENSGT00530000062962.b.a.f.a #22 ENSGT00390000009486.e #23 ENSGT01030000234532.B.e.b.f.b #24 ENSGT00940000155836.B.c #25 ENSGT00940000154914.tb #26 ENSGT00940000155333.A.b.b ##27 ENSGT00940000153487.b.b.s #30 ENSGT00390000018145.f #32 ENSGT00940000157369.a.c #34 ENSGT00390000010331.n #31 ENSGT00940000158146.b.f #35 ENSGT00940000153499.b.b.d.a.b.i.b #37 ENSGT00390000007218.q ENSGT00390000008908.a Cyprininae_a ANCESTRAL SPECIES 131 ENSGT00940000163703.b.c ENSGT00940000159811.h ENSGT00940000158682.c ENSGT00940000154837.k ENSGT00530000063553.b.b.d ENSGT00940000168336.c ENSGT00950000183151.a.a.b.b.i ENSGT00940000156356.d ENSGT00940000157335.l ENSGT01050000244866.C.b ENSGT00940000156011.`b ENSGT00390000015052.b ENSGT00940000155744.g.a ENSGT00940000169185.a ENSGT00440000038107.o ENSGT00530000062962.b.a.f.a #22 ENSGT00390000009486.e #23 ENSGT01030000234532.B.e.b.f.b #24 ENSGT00940000155836.B.c #25 ENSGT00940000154914.tb #26 ENSGT00940000155333.A.b.b ##27 ENSGT00940000153487.b.b.s #30 ENSGT00390000018145.f #32 ENSGT00390000013696.f #33 ENSGT00940000157369.a.c #34 ENSGT00390000010331.n #31 ENSGT00940000158146.b.f #35 ENSGT00940000153499.b.b.d.a.b.i.b #37 ENSGT00390000007218.q ENSGT00390000008908.a Common carp reference MODERN SPECIES 9 si:ch211-212o1.2 (ENSCCRG00000080717) cbln1 (ENSCCRG00000077181) n4bp1 (ENSCCRG00000061978) siah1 (ENSCCRG00000072198) lonp2 (ENSCCRG00000034928) il34 (ENSCCRG00000060641) sf3b3 (ENSCCRG00000024068) st3gal2 (ENSCCRG00000076295) aars1 (ENSCCRG00000005376) ENSCCRG00000006513 pllp (ENSCCRG00000005176) arl2bp (ENSCCRG00000005183) arih1 (ENSCCRG00000025952) ENSCCRG00000081007 ppcdc (ENSCCRG00000018299) hacd3 (ENSCCRG00000017852) #22 ints14 (ENSCCRG00000047151) #23 SLC24A1 (ENSCCRG00000066083) #24 dennd4a (ENSCCRG00000020231) #25 rab11a (ENSCCRG00000059058) #26 ENSCCRG00000009371 ##27 map2k1 (ENSCCRG00000035016) #30 rpl4 (ENSCCRG00000034465) #32 LCTL (ENSCCRG00000034940) #34 snapc5 (ENSCCRG00000076911) #31 smad6b (ENSCCRG00000028531) #35 smad3b (ENSCCRG00000014185) #37 aagab (ENSCCRG00000014234) iqch (ENSCCRG00000014287) ENSCCRG00000064665 skor1b (ENSCCRG00000043233) Golden-line barbel MODERN SPECIES 54 ZNF423 (ENSSGRG00000030816) si:ch211-212o1.2 (ENSSGRG00000030805) cbln1 (ENSSGRG00000030803) n4bp1 (ENSSGRG00000030802) lonp2 (ENSSGRG00000030801) il34 (ENSSGRG00000030800) SF3B3 (ENSSGRG00000030799) ENSSGRG00000030794 ENSSGRG00000030795 st3gal2 (ENSSGRG00000030792) aars1 (ENSSGRG00000029996) ENSSGRG00000029983 arih1 (ENSSGRG00000029910) ENSSGRG00000029906 ppcdc (ENSSGRG00000029905) hacd3 (ENSSGRG00000029894) #22 ints14 (ENSSGRG00000029760) #23 SLC24A1 (ENSSGRG00000029751) #24 dennd4a (ENSSGRG00000028490) #25 rab11a (ENSSGRG00000028469) #26 ENSSGRG00000028343 ##27 map2k1 (ENSSGRG00000026412) #30 rpl4 (ENSSGRG00000026237) #32 zwilch (ENSSGRG00000026228) #33 LCTL (ENSSGRG00000026226) #34 snapc5 (ENSSGRG00000026223) #31 smad6b (ENSSGRG00000026221) #35 smad3b (ENSSGRG00000025385) #37 aagab (ENSSGRG00000025352) iqch (ENSSGRG00000025341) zgc:162898 (ENSSGRG00000025335) Goldfish MODERN SPECIES 37 si:ch211-212o1.2 (ENSCARG00000065783) cbln1 (ENSCARG00000065779) n4bp1 (ENSCARG00000065774) siah1 (ENSCARG00000065769) lonp2 (ENSCARG00000065548) il34 (ENSCARG00000065462) sf3b3 (ENSCARG00000065369) st3gal2 (ENSCARG00000065325) aars1 (ENSCARG00000065093) ENSCARG00000064321 pllp (ENSCARG00000064293) arl2bp (ENSCARG00000064261) arih1 (ENSCARG00000063977) ENSCARG00000063954 ppcdc (ENSCARG00000063932) hacd3 (ENSCARG00000063827) #22 ints14 (ENSCARG00000063746) #23 SLC24A1 (ENSCARG00000063727) #24 dennd4a (ENSCARG00000062471) #25 rab11a (ENSCARG00000062368) #26 ENSCARG00000058612 ##27 map2k1 (ENSCARG00000057706) #30 rpl4 (ENSCARG00000057625) #32 LCTL (ENSCARG00000057492) #34 snapc5 (ENSCARG00000057463) #31 smad6b (ENSCARG00000057432) #35 smad3b (ENSCARG00000057166) #37 aagab (ENSCARG00000057137) ENSCARG00000057132 skor1b (ENSCARG00000057106) ENSCARG00000057077 Cyprininae ANCESTRAL SPECIES 74 ENSGT00940000163703.b.d ENSGT00940000159811.g ENSGT00940000158682.d ENSGT00940000154837.l ENSGT00530000063553.b.b.c ENSGT00940000168336.d ENSGT00950000183151.a.a.b.b.j ENSGT00940000156356.c ENSGT00940000157335.k ENSGT01050000244866.C.a ENSGT00940000156011.ab ENSGT00390000015052.a ENSGT00940000155744.g.b ENSGT00940000169185.b ENSGT00440000038107.p ENSGT00530000062962.b.a.f.b #22 ENSGT00390000009486.f #23 ENSGT01030000234532.B.e.b.f.a #24 ENSGT00940000155836.B.d #25 ENSGT00940000154914.ub #26 ENSGT00940000155333.A.b.a ##27 ENSGT00940000153487.b.b.t #30 ENSGT00390000018145.e #32 ENSGT00390000013696 #33 ENSGT00940000157369.a.d #34 ENSGT00390000010331.m #31 ENSGT00940000158146.b.e #35 ENSGT00940000153499.b.b.d.a.b.i.a #37 ENSGT00390000007218.r ENSGT00390000008908.b ENSGT00390000015942 Goldfish MODERN SPECIES 9 si:ch211-212o1.2 (ENSCARG00000011103) cbln1 (ENSCARG00000011105) n4bp1 (ENSCARG00000011117) siah1 (ENSCARG00000011126) lonp2 (ENSCARG00000011141) il34 (ENSCARG00000011515) sf3b3 (ENSCARG00000011537) st3gal2 (ENSCARG00000011584) aars1 (ENSCARG00000011630) ENSCARG00000011736 pllp (ENSCARG00000011891) arl2bp (ENSCARG00000011894) arih1 (ENSCARG00000011916) ENSCARG00000011988 ppcdc (ENSCARG00000011991) hacd3 (ENSCARG00000012002) #22 ints14 (ENSCARG00000012147) #23 SLC24A1 (ENSCARG00000012194) #24 dennd4a (ENSCARG00000012263) #25 rab11a (ENSCARG00000013410) #26 ENSCARG00000013448 ##27 map2k1 (ENSCARG00000013618) #30 rpl4 (ENSCARG00000013743) #32 zwilch (ENSCARG00000013771) #33 LCTL (ENSCARG00000013798) #34 snapc5 (ENSCARG00000013818) #31 smad6b (ENSCARG00000013826) #35 smad3b (ENSCARG00000013852) #37 aagab (ENSCARG00000013875) iqch (ENSCARG00000013907) zgc:162898 (ENSCARG00000013951) Cyprininae_a ANCESTRAL SPECIES 15 ENSGT00940000163703.b.d ENSGT00940000159811.g ENSGT00940000158682.d ENSGT00940000154837.l ENSGT00530000063553.b.b.c ENSGT00940000168336.d ENSGT00950000183151.a.a.b.b.j ENSGT00940000156356.c ENSGT00940000157335.k ENSGT01050000244866.C.a ENSGT00940000156011.ab ENSGT00390000015052.a ENSGT00940000155744.g.b ENSGT00940000169185.b ENSGT00440000038107.p ENSGT00530000062962.b.a.f.b #22 ENSGT00390000009486.f #23 ENSGT01030000234532.B.e.b.f.a #24 ENSGT00940000155836.B.d #25 ENSGT00940000154914.ub #26 ENSGT00940000155333.A.b.a ##27 ENSGT00940000153487.b.b.t #30 ENSGT00390000018145.e #32 ENSGT00390000013696.e #33 ENSGT00940000157369.a.d #34 ENSGT00390000010331.m #31 ENSGT00940000158146.b.e #35 ENSGT00940000153499.b.b.d.a.b.i.a #37 ENSGT00390000007218.r ENSGT00390000008908.b ENSGT00390000015942 Golden-line barbel MODERN SPECIES 224 ppcdc (ENSSGRG00000053835) hacd3 (ENSSGRG00000053825) #22 ints14 (ENSSGRG00000053784) #23 SLC24A1 (ENSSGRG00000053777) #24 dennd4a (ENSSGRG00000053530) #25 rab11a (ENSSGRG00000053474) #26 ENSSGRG00000053461 ##27 map2k1 (ENSSGRG00000053371) #30 rpl4 (ENSSGRG00000053329) #32 zwilch (ENSSGRG00000053327) #33 LCTL (ENSSGRG00000053324) #34 snapc5 (ENSSGRG00000053323) #31 smad6b (ENSSGRG00000053322) #35 ENSSGRG00000053321 #37 aagab (ENSSGRG00000053318) iqch (ENSSGRG00000053315) zgc:162898 (ENSSGRG00000053314) Common carp reference MODERN SPECIES 19 znf423 (ENSCCRG00000039463) si:ch211-212o1.2 (ENSCCRG00000055857) cbln1 (ENSCCRG00000081095) n4bp1 (ENSCCRG00000029198) siah1 (ENSCCRG00000073445) lonp2 (ENSCCRG00000070534) il34 (ENSCCRG00000025227) sf3b3 (ENSCCRG00000026756) st3gal2 (ENSCCRG00000077284) aars1 (ENSCCRG00000004748) ENSCCRG00000005086 arl2bp (ENSCCRG00000058906) arih1 (ENSCCRG00000005206) ENSCCRG00000071734 ppcdc (ENSCCRG00000072999) hacd3 (ENSCCRG00000047136) #22 ints14 (ENSCCRG00000017792) #23 SLC24A1 (ENSCCRG00000009282) #24 ENSCCRG00000072431 dennd4a (ENSCCRG00000009528) #25 rab11a (ENSCCRG00000009402) #26 ENSCCRG00000073950 ##27 map2k1 (ENSCCRG00000077344) #30 zwilch (ENSCCRG00000034439) #33 LCTL (ENSCCRG00000017070) #34 snapc5 (ENSCCRG00000078719) #31 smad6b (ENSCCRG00000017061) #35 smad3b (ENSCCRG00000067387) #37 aagab (ENSCCRG00000016912) iqch (ENSCCRG00000077345) skor1b (ENSCCRG00000014176) Zebrafish MODERN SPECIES 9 ENSDARG00000112014 cbln1 (ENSDARG00000057296) n4bp1 (ENSDARG00000057491) siah1 (ENSDARG00000030871) lonp2 (ENSDARG00000101438) il34 (ENSDARG00000091003) sf3b3 (ENSDARG00000103553) st3gal2 (ENSDARG00000112898) aars1 (ENSDARG00000069142) ENSDARG00000093381 pllp (ENSDARG00000062756) arl2bp (ENSDARG00000025383) arih1 (ENSDARG00000003616) ENSDARG00000069168 ppcdc (ENSDARG00000033020) hacd3 (ENSDARG00000016038) #22 ints14 (ENSDARG00000041429) #23 SLC24A1 (ENSDARG00000041431) #24 dennd4a (ENSDARG00000062721) #25 ENSDARG00000092535 ENSDARG00000069189 rab11a (ENSDARG00000041450) #26 ENSDARG00000062686 ##27 map2k1 (ENSDARG00000007825) #30 rpl4 (ENSDARG00000041182) #32 zwilch (ENSDARG00000057100) #33 LCTL (ENSDARG00000016337) #34 snapc5 (ENSDARG00000062476) #31 smad6b (ENSDARG00000031763) #35 smad3b (ENSDARG00000010207) #37 aagab (ENSDARG00000041170) Clupeiformes ANCESTRAL SPECIES 4 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366.cb ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B.e #25 ENSGT00940000154914 #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 Denticle herring MODERN SPECIES 8 MAN2C1 (ENSDCDG00000022796) neil1 (ENSDCDG00000022781) commd4 (ENSDCDG00000022776) islr2 (ENSDCDG00000022773) sema7a (ENSDCDG00000022767) islr2 (ENSDCDG00000022765) stra6 (ENSDCDG00000022373) ENSDCDG00000022353 cyp11a1.1 (ENSDCDG00000022348) stoml1 (ENSDCDG00000022343) nr2e3 (ENSDCDG00000022341) hexa (ENSDCDG00000022236) arih1 (ENSDCDG00000022181) ENSDCDG00000022175 ppcdc (ENSDCDG00000022174) hacd3 (ENSDCDG00000022160) #22 ints14 (ENSDCDG00000022144) #23 SLC24A1 (ENSDCDG00000022137) #24 dennd4a (ENSDCDG00000022118) #25 rab11a (ENSDCDG00000034506) #26 ENSDCDG00000034401 ##27 TDG (ENSDCDG00000034392) tdg.1 (ENSDCDG00000034387) ENSDCDG00000034376 ENSDCDG00000034368 samm50 (ENSDCDG00000034358) ENSDCDG00000034357 RAB19 (ENSDCDG00000034353) ccdc34 (ENSDCDG00000034351) ENSDCDG00000034350 PRKAR2B (ENSDCDG00000034323) Atlantic herring MODERN SPECIES 19 MAN2C1 (ENSCHAG00000005362) neil1 (ENSCHAG00000005274) commd4 (ENSCHAG00000005256) sema7a (ENSCHAG00000005220) islr2 (ENSCHAG00000005198) stra6 (ENSCHAG00000004961) ENSCHAG00000004932 ENSCHAG00000004915 cyp11a1.1 (ENSCHAG00000004846) stoml1 (ENSCHAG00000004806) nr2e3 (ENSCHAG00000004783) hexa (ENSCHAG00000004565) arih1 (ENSCHAG00000004536) ENSCHAG00000004518 ppcdc (ENSCHAG00000004502) hacd3 (ENSCHAG00000004038) #22 ints14 (ENSCHAG00000003814) #23 SLC24A1 (ENSCHAG00000003677) #24 dennd4a (ENSCHAG00000003270) #25 rab11a (ENSCHAG00000002433) #26 ENSCHAG00000000584 ##27 map2k1 (ENSCHAG00000000220) #30 snapc5 (ENSCHAG00000000160) #31 LCTL (ENSCHAG00000000142) #34 zwilch (ENSCHAG00000000117) #33 rpl4 (ENSCHAG00000023757) #32 map2k1 (ENSCHAG00000023747) #30 smad6b (ENSCHAG00000023735) #35 ENSCHAG00000023728 smad6b (ENSCHAG00000023725) #35 ENSCHAG00000023724 Euteleosteomorpha ANCESTRAL SPECIES 1 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Acanthomorphata ANCESTRAL SPECIES 4 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Euacanthomorphacea ANCESTRAL SPECIES 7 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Percomorphaceae ANCESTRAL SPECIES 4 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Tiger tail seahorse MODERN SPECIES 249 ENSHCOG00000013518 fbxl22 (ENSHCOG00000013523) ENSHCOG00000013533 ENSHCOG00000013933 MAN2C1 (ENSHCOG00000013987) neil1 (ENSHCOG00000014018) commd4 (ENSHCOG00000000394) sema7a (ENSHCOG00000014100) islr2 (ENSHCOG00000014105) stra6 (ENSHCOG00000014143) cyp11a1.1 (ENSHCOG00000014162) stoml1 (ENSHCOG00000014203) arih1 (ENSHCOG00000014228) ENSHCOG00000014240 ppcdc (ENSHCOG00000014241) hacd3 (ENSHCOG00000014277) #22 ints14 (ENSHCOG00000014315) #23 SLC24A1 (ENSHCOG00000014347) #24 ENSHCOG00000014412 ##25 ENSHCOG00000014452 ##27 map2k1 (ENSHCOG00000014666) #30 rpl4 (ENSHCOG00000014929) #32 zwilch (ENSHCOG00000014943) #33 LCTL (ENSHCOG00000014977) #34 snapc5 (ENSHCOG00000014982) #31 smad6b (ENSHCOG00000015011) #35 smad3b (ENSHCOG00000015055) #37 aagab (ENSHCOG00000015070) zgc:162898 (ENSHCOG00000015085) skor1b (ENSHCOG00000015092) PIAS1 (ENSHCOG00000015129) Percomorphaceae_B ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Percomorphaceae_C ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Percomorphaceae_D ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Anabantaria ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Anabantoidei ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Climbing perch MODERN SPECIES 19 CA12 (ENSATEG00000008047) MAN2C1 (ENSATEG00000008308) neil1 (ENSATEG00000008457) commd4 (ENSATEG00000025527) sema7a (ENSATEG00000008619) islr2 (ENSATEG00000008628) stra6 (ENSATEG00000008644) ENSATEG00000008870 cyp11a1.1 (ENSATEG00000008908) stoml1 (ENSATEG00000008950) nr2e3 (ENSATEG00000009037) hexa (ENSATEG00000009154) arih1 (ENSATEG00000009186) ENSATEG00000009236 ppcdc (ENSATEG00000029359) hacd3 (ENSATEG00000025872) #22 ints14 (ENSATEG00000009319) #23 SLC24A1 (ENSATEG00000009377) #24 ENSATEG00000009439 ##25 ENSATEG00000009531 ##27 map2k1 (ENSATEG00000009613) #30 rpl4 (ENSATEG00000009670) #32 zwilch (ENSATEG00000009702) #33 LCTL (ENSATEG00000009711) #34 snapc5 (ENSATEG00000009776) #31 smad6b (ENSATEG00000009784) #35 smad3b (ENSATEG00000009812) #37 aagab (ENSATEG00000009864) iqch (ENSATEG00000009880) C15orf61 (ENSATEG00000028998) skor1b (ENSATEG00000009950) Siamese fighting fish MODERN SPECIES 17 fbxl22 (ENSBSLG00000011639) usp3 (ENSBSLG00000011872) si:dkeyp-73b11.8 (ENSBSLG00000012761) CA12 (ENSBSLG00000012772) MAN2C1 (ENSBSLG00000012871) neil1 (ENSBSLG00000012950) sema7a (ENSBSLG00000012956) islr2 (ENSBSLG00000012959) stra6 (ENSBSLG00000012960) ENSBSLG00000012981 cyp11a1.1 (ENSBSLG00000013006) hexa (ENSBSLG00000014091) arih1 (ENSBSLG00000014624) ENSBSLG00000014828 ppcdc (ENSBSLG00000014843) hacd3 (ENSBSLG00000014925) #22 ints14 (ENSBSLG00000014980) #23 SLC24A1 (ENSBSLG00000015079) #24 ENSBSLG00000015093 ##25 ENSBSLG00000015132 ##27 map2k1 (ENSBSLG00000015609) #30 rpl4 (ENSBSLG00000016291) #32 zwilch (ENSBSLG00000016330) #33 LCTL (ENSBSLG00000016343) #34 snapc5 (ENSBSLG00000016407) #31 smad6b (ENSBSLG00000016413) #35 smad3b (ENSBSLG00000016420) #37 aagab (ENSBSLG00000016446) iqch (ENSBSLG00000016456) zgc:162898 (ENSBSLG00000016466) skor1b (ENSBSLG00000016468) Zig-zag eel MODERN SPECIES 20 si:dkeyp-73b11.8 (ENSMAMG00000007254) CA12 (ENSMAMG00000007184) MAN2C1 (ENSMAMG00000007061) neil1 (ENSMAMG00000007164) commd4 (ENSMAMG00000007025) sema7a (ENSMAMG00000007015) islr2 (ENSMAMG00000007007) stra6 (ENSMAMG00000006937) ENSMAMG00000006892 cyp11a1.1 (ENSMAMG00000006863) nr2e3 (ENSMAMG00000006787) hexa (ENSMAMG00000006611) arih1 (ENSMAMG00000006559) ENSMAMG00000006536 ppcdc (ENSMAMG00000006514) hacd3 (ENSMAMG00000006428) #22 ints14 (ENSMAMG00000006472) #23 SLC24A1 (ENSMAMG00000006350) #24 ENSMAMG00000006239 ##25 ENSMAMG00000006178 ##27 map2k1 (ENSMAMG00000006146) #30 rpl4 (ENSMAMG00000006058) #32 zwilch (ENSMAMG00000006031) #33 LCTL (ENSMAMG00000006001) #34 snapc5 (ENSMAMG00000005992) #31 ENSMAMG00000024281 smad6b (ENSMAMG00000005972) #35 smad3b (ENSMAMG00000005952) #37 aagab (ENSMAMG00000005930) iqch (ENSMAMG00000005883) zgc:162898 (ENSMAMG00000005865) Carangaria ANCESTRAL SPECIES 6 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Pleuronectoidei ANCESTRAL SPECIES ENSGT00940000157850 ENSGT00940000168688 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Turbot MODERN SPECIES 1 usp3 (ENSSMAG00000015544) si:dkeyp-73b11.8 (ENSSMAG00000015518) CA12 (ENSSMAG00000015506) MAN2C1 (ENSSMAG00000015304) neil1 (ENSSMAG00000015491) commd4 (ENSSMAG00000015462) sema7a (ENSSMAG00000015292) islr2 (ENSSMAG00000015283) stra6 (ENSSMAG00000015243) ENSSMAG00000015209 cyp11a1.1 (ENSSMAG00000015163) nr2e3 (ENSSMAG00000015123) arih1 (ENSSMAG00000015075) ENSSMAG00000015064 ppcdc (ENSSMAG00000015044) hacd3 (ENSSMAG00000015006) #22 ints14 (ENSSMAG00000014965) #23 SLC24A1 (ENSSMAG00000014927) #24 SLC24A1 (ENSSMAG00000014916) #24 ENSSMAG00000014740 ##25 ENSSMAG00000014692 ##27 ENSSMAG00000028102 map2k1 (ENSSMAG00000014654) #30 rpl4 (ENSSMAG00000014547) #32 zwilch (ENSSMAG00000014527) #33 LCTL (ENSSMAG00000014482) #34 snapc5 (ENSSMAG00000014452) #31 smad6b (ENSSMAG00000014437) #35 smad3b (ENSSMAG00000014385) #37 aagab (ENSSMAG00000014364) iqch (ENSSMAG00000014326) Carangaria_A ANCESTRAL SPECIES ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Seriola ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Yellowtail amberjack MODERN SPECIES 3044 CA12 (ENSSLDG00000024254) ENSSLDG00000024186 neil1 (ENSSLDG00000024179) commd4 (ENSSLDG00000024172) sema7a (ENSSLDG00000024152) islr2 (ENSSLDG00000024147) stra6 (ENSSLDG00000024104) ENSSLDG00000024086 cyp11a1.1 (ENSSLDG00000024083) stoml1 (ENSSLDG00000024076) nr2e3 (ENSSLDG00000023960) hexa (ENSSLDG00000023910) arih1 (ENSSLDG00000023887) ENSSLDG00000023878 ppcdc (ENSSLDG00000023867) hacd3 (ENSSLDG00000023846) #22 ints14 (ENSSLDG00000023818) #23 ENSSLDG00000023813 #24 SLC24A1 (ENSSLDG00000023774) #24 ENSSLDG00000023736 ##25 ENSSLDG00000023706 ##27 map2k1 (ENSSLDG00000023678) #30 rpl4 (ENSSLDG00000023658) #32 zwilch (ENSSLDG00000023641) #33 LCTL (ENSSLDG00000023587) #34 snapc5 (ENSSLDG00000023570) #31 smad6b (ENSSLDG00000023557) #35 smad3b (ENSSLDG00000023534) #37 aagab (ENSSLDG00000023521) iqch (ENSSLDG00000023494) zgc:162898 (ENSSLDG00000023483) Greater amberjack MODERN SPECIES 82 CA12 (ENSSDUG00000008779) MAN2C1 (ENSSDUG00000008735) neil1 (ENSSDUG00000008709) commd4 (ENSSDUG00000008698) sema7a (ENSSDUG00000008675) islr2 (ENSSDUG00000008671) stra6 (ENSSDUG00000008630) ENSSDUG00000008592 cyp11a1.1 (ENSSDUG00000008603) stoml1 (ENSSDUG00000008576) nr2e3 (ENSSDUG00000008558) hexa (ENSSDUG00000008531) arih1 (ENSSDUG00000008436) ENSSDUG00000008409 ppcdc (ENSSDUG00000008384) hacd3 (ENSSDUG00000008342) #22 ints14 (ENSSDUG00000008301) #23 SLC24A1 (ENSSDUG00000008280) #24 SLC24A1 (ENSSDUG00000008265) #24 ENSSDUG00000008166 ##25 ENSSDUG00000008123 ##27 map2k1 (ENSSDUG00000008098) #30 RPL4 (ENSSDUG00000008061) #32 zwilch (ENSSDUG00000008041) #33 LCTL (ENSSDUG00000008008) #34 snapc5 (ENSSDUG00000008001) #31 smad6b (ENSSDUG00000007977) #35 smad3b (ENSSDUG00000007957) #37 aagab (ENSSDUG00000007934) iqch (ENSSDUG00000007847) zgc:162898 (ENSSDUG00000007821) Barramundi perch MODERN SPECIES 17 CA12 (ENSLCAG00010011366) MAN2C1 (ENSLCAG00010011398) ENSLCAG00010011472 neil1 (ENSLCAG00010011474) commd4 (ENSLCAG00010011476) sema7a (ENSLCAG00010011483) islr2 (ENSLCAG00010011486) stra6 (ENSLCAG00010011487) ENSLCAG00010011491 cyp11a1.1 (ENSLCAG00010011508) nr2e3 (ENSLCAG00010011582) hexa (ENSLCAG00010011617) arih1 (ENSLCAG00010011638) ENSLCAG00010011674 ppcdc (ENSLCAG00010011677) hacd3 (ENSLCAG00010011684) #22 ints14 (ENSLCAG00010011694) #23 SLC24A1 (ENSLCAG00010011706) #24 ENSLCAG00010011723 ##25 ENSLCAG00010011752 ENSLCAG00010011758 ##27 map2k1 (ENSLCAG00010011873) #30 rpl4 (ENSLCAG00010012306) #32 zwilch (ENSLCAG00010012324) #33 LCTL (ENSLCAG00010012337) #34 snapc5 (ENSLCAG00010012353) #31 smad6b (ENSLCAG00010012358) #35 smad3b (ENSLCAG00010012407) #37 aagab (ENSLCAG00010012566) iqch (ENSLCAG00010012573) zgc:162898 (ENSLCAG00010012578) Eupercaria ANCESTRAL SPECIES 6 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Tetraodontidae ANCESTRAL SPECIES 11 ENSGT00390000003748 ENSGT00940000157850 ENSGT00940000168688 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b.p #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b Tetraodon MODERN SPECIES 4 ENSTNIG00000008408 fbxl22 (ENSTNIG00000008409) usp3 (ENSTNIG00000008410) ENSTNIG00000001490 CA12 (ENSTNIG00000008411) MAN2C1 (ENSTNIG00000008412) neil1 (ENSTNIG00000008413) commd4 (ENSTNIG00000008414) sema7a (ENSTNIG00000008415) islr2 (ENSTNIG00000008416) stra6 (ENSTNIG00000008417) cyp11a1.1 (ENSTNIG00000008418) stoml1 (ENSTNIG00000008419) arih1 (ENSTNIG00000008420) ppcdc (ENSTNIG00000008421) hacd3 (ENSTNIG00000008422) #22 ints14 (ENSTNIG00000008423) #23 SLC24A1 (ENSTNIG00000008424) #24 ENSTNIG00000008425 ##25 ENSTNIG00000008426 ##27 map2k1 (ENSTNIG00000008427) #30 rpl4 (ENSTNIG00000008428) #32 zwilch (ENSTNIG00000008429) #33 LCTL (ENSTNIG00000008430) #34 smad6b (ENSTNIG00000008431) #35 smad3b (ENSTNIG00000008432) #37 aagab (ENSTNIG00000008433) skor1b (ENSTNIG00000001504) PIAS1 (ENSTNIG00000008434) morf4l1 (ENSTNIG00000008435) TLE3 (ENSTNIG00000008436) Fugu MODERN SPECIES 21 TBC1D2B (ENSTRUG00000012809) ENSTRUG00000012994 ENSTRUG00000020001 fbxl22 (ENSTRUG00000013054) usp3 (ENSTRUG00000013067) ENSTRUG00000027381 CA12 (ENSTRUG00000013194) commd4 (ENSTRUG00000013548) sema7a (ENSTRUG00000013566) stra6 (ENSTRUG00000019577) cyp11a1.1 (ENSTRUG00000013804) stoml1 (ENSTRUG00000019856) arih1 (ENSTRUG00000013998) ENSTRUG00000022549 ppcdc (ENSTRUG00000014075) hacd3 (ENSTRUG00000031290) #22 ints14 (ENSTRUG00000014091) #23 SLC24A1 (ENSTRUG00000014175) #24 ENSTRUG00000014237 ##25 ENSTRUG00000014394 ##27 map2k1 (ENSTRUG00000014529) #30 rpl4 (ENSTRUG00000014667) #32 zwilch (ENSTRUG00000021693) #33 LCTL (ENSTRUG00000014732) #34 snapc5 (ENSTRUG00000020463) #31 smad6b (ENSTRUG00000021541) #35 smad3b (ENSTRUG00000014802) #37 aagab (ENSTRUG00000014949) zgc:162898 (ENSTRUG00000020437) skor1b (ENSTRUG00000014982) morf4l1 (ENSTRUG00000015077) Eupecaria_A ANCESTRAL SPECIES 7 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Ballan wrasse MODERN SPECIES 40 ENSLBEG00000016912 CA12 (ENSLBEG00000016859) MAN2C1 (ENSLBEG00000016738) ENSLBEG00000016684 commd4 (ENSLBEG00000016670) sema7a (ENSLBEG00000016623) islr2 (ENSLBEG00000016601) stra6 (ENSLBEG00000016572) ENSLBEG00000016546 cyp11a1.1 (ENSLBEG00000016502) nr2e3 (ENSLBEG00000016464) hexa (ENSLBEG00000016294) arih1 (ENSLBEG00000016202) ENSLBEG00000016174 ppcdc (ENSLBEG00000016135) hacd3 (ENSLBEG00000016087) #22 ints14 (ENSLBEG00000016057) #23 SLC24A1 (ENSLBEG00000016038) #24 SLC24A1 (ENSLBEG00000016014) #24 ENSLBEG00000015940 ##25 ENSLBEG00000015733 ##27 map2k1 (ENSLBEG00000015601) #30 rpl4 (ENSLBEG00000015490) #32 zwilch (ENSLBEG00000015453) #33 LCTL (ENSLBEG00000015396) #34 snapc5 (ENSLBEG00000015381) #31 smad6b (ENSLBEG00000015360) #35 smad3b (ENSLBEG00000015322) #37 aagab (ENSLBEG00000015299) iqch (ENSLBEG00000015224) zgc:162898 (ENSLBEG00000015192) Eupecaria_B ANCESTRAL SPECIES 7 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Eupecaria_C ANCESTRAL SPECIES 6 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 4 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b European seabass MODERN SPECIES 19 ENSDLAG00005022822 CA12 (ENSDLAG00005022828) ENSDLAG00005022859 neil1 (ENSDLAG00005023089) sema7a (ENSDLAG00005023103) islr2 (ENSDLAG00005023110) stra6 (ENSDLAG00005023124) ENSDLAG00005023196 cyp11a1.1 (ENSDLAG00005001579) nr2e3 (ENSDLAG00005001714) hexa (ENSDLAG00005001862) arih1 (ENSDLAG00005026838) ENSDLAG00005033300 ENSDLAG00005004072 ints14 (ENSDLAG00005004123) #23 hacd3 (ENSDLAG00005004092) #22 ENSDLAG00005004229 #24 ENSDLAG00005004243 #24 ENSDLAG00005004333 ##25 ENSDLAG00005004815 ##27 map2k1 (ENSDLAG00005005002) #30 rpl4 (ENSDLAG00005005228) #32 zwilch (ENSDLAG00005005332) #33 LCTL (ENSDLAG00005005497) #34 snapc5 (ENSDLAG00005005541) #31 smad6b (ENSDLAG00005033513) #35 smad3b (ENSDLAG00005005574) #37 aagab (ENSDLAG00005005902) zgc:162898 (ENSDLAG00005031120) skor1b (ENSDLAG00005005972) PIAS1 (ENSDLAG00005006027) Large yellow croaker MODERN SPECIES 492 CA12 (ENSLCRG00005011255) MAN2C1 (ENSLCRG00005011220) neil1 (ENSLCRG00005011212) commd4 (ENSLCRG00005011208) sema7a (ENSLCRG00005011205) islr2 (ENSLCRG00005011203) stra6 (ENSLCRG00005011201) ENSLCRG00005011197 cyp11a1.1 (ENSLCRG00005010309) stoml1 (ENSLCRG00005010303) nr2e3 (ENSLCRG00005010302) hexa (ENSLCRG00005010055) arih1 (ENSLCRG00005010040) ENSLCRG00005010032 ppcdc (ENSLCRG00005010030) hacd3 (ENSLCRG00005009991) #22 ints14 (ENSLCRG00005009985) #23 SLC24A1 (ENSLCRG00005009983) #24 SLC24A1 (ENSLCRG00005009980) #24 ENSLCRG00005009722 ##25 ENSLCRG00005009493 ##27 map2k1 (ENSLCRG00005009481) #30 rpl4 (ENSLCRG00005008994) #32 zwilch (ENSLCRG00005008990) #33 LCTL (ENSLCRG00005008987) #34 snapc5 (ENSLCRG00005008983) #31 smad6b (ENSLCRG00005008982) #35 smad3b (ENSLCRG00005008972) #37 aagab (ENSLCRG00005008957) iqch (ENSLCRG00005008950) zgc:162898 (ENSLCRG00005008946) Gilthead seabream MODERN SPECIES 22 ENSSAUG00010007237 CA12 (ENSSAUG00010007240) MAN2C1 (ENSSAUG00010007286) neil1 (ENSSAUG00010007360) commd4 (ENSSAUG00010007361) sema7a (ENSSAUG00010007363) islr2 (ENSSAUG00010007366) stra6 (ENSSAUG00010007368) ENSSAUG00010007372 cyp11a1.1 (ENSSAUG00010007387) nr2e3 (ENSSAUG00010007491) hexa (ENSSAUG00010007538) arih1 (ENSSAUG00010009448) ENSSAUG00010009484 ppcdc (ENSSAUG00010009485) hacd3 (ENSSAUG00010009487) #22 ints14 (ENSSAUG00010009496) #23 SLC24A1 (ENSSAUG00010009505) #24 SLC24A1 (ENSSAUG00010009511) #24 ENSSAUG00010009514 ##25 ENSSAUG00010009554 ##27 map2k1 (ENSSAUG00010010913) #30 rpl4 (ENSSAUG00010011110) #32 zwilch (ENSSAUG00010011149) #33 LCTL (ENSSAUG00010011608) #34 snapc5 (ENSSAUG00010011612) #31 smad6b (ENSSAUG00010011616) #35 smad3b (ENSSAUG00010011625) #37 aagab (ENSSAUG00010011683) iqch (ENSSAUG00010011685) zgc:162898 (ENSSAUG00010011688) Perciformes ANCESTRAL SPECIES 7 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Perciformes_a ANCESTRAL SPECIES 7 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Pike perch MODERN SPECIES 6 ENSSLUG00000017755 CA12 (ENSSLUG00000017761) MAN2C1 (ENSSLUG00000017800) neil1 (ENSSLUG00000017871) commd4 (ENSSLUG00000017867) sema7a (ENSSLUG00000017872) islr2 (ENSSLUG00000017877) stra6 (ENSSLUG00000017890) cyp11a1.1 (ENSSLUG00000017962) stoml1 (ENSSLUG00000018482) nr2e3 (ENSSLUG00000018489) hexa (ENSSLUG00000018512) arih1 (ENSSLUG00000018735) ENSSLUG00000018766 ppcdc (ENSSLUG00000018769) hacd3 (ENSSLUG00000018784) #22 ints14 (ENSSLUG00000018842) #23 SLC24A1 (ENSSLUG00000018879) #24 ENSSLUG00000018947 ##25 ENSSLUG00000019161 ##27 map2k1 (ENSSLUG00000000165) #30 rpl4 (ENSSLUG00000000272) #32 zwilch (ENSSLUG00000000305) #33 LCTL (ENSSLUG00000000329) #34 snapc5 (ENSSLUG00000000334) #31 smad6b (ENSSLUG00000000337) #35 smad3b (ENSSLUG00000000353) #37 aagab (ENSSLUG00000000395) iqch (ENSSLUG00000000409) zgc:162898 (ENSSLUG00000000425) skor1b (ENSSLUG00000000431) Channel bull blenny MODERN SPECIES 20 CYP11A1 (ENSCGOG00000007641) stoml1 (ENSCGOG00000007838) ENSCGOG00000007839 CYP11A1 (ENSCGOG00000007842) stoml1 (ENSCGOG00000007901) CYP11A1 (ENSCGOG00000007940) stoml1 (ENSCGOG00000008005) ENSCGOG00000008049 ENSCGOG00000008055 stoml1 (ENSCGOG00000008136) nr2e3 (ENSCGOG00000008164) hexa (ENSCGOG00000008317) arih1 (ENSCGOG00000010759) ENSCGOG00000010801 ppcdc (ENSCGOG00000010802) hacd3 (ENSCGOG00000010806) #22 ints14 (ENSCGOG00000010944) #23 SLC24A1 (ENSCGOG00000010978) #24 ENSCGOG00000011005 ##25 ENSCGOG00000012718 ##27 map2k1 (ENSCGOG00000012783) #30 rpl4 (ENSCGOG00000014628) #32 zwilch (ENSCGOG00000014660) #33 LCTL (ENSCGOG00000014696) #34 snapc5 (ENSCGOG00000014701) #31 smad6b (ENSCGOG00000014702) #35 smad3b (ENSCGOG00000014715) #37 aagab (ENSCGOG00000015616) iqch (ENSCGOG00000015654) zgc:162898 (ENSCGOG00000015744) skor1b (ENSCGOG00000015746) Cottioidei ANCESTRAL SPECIES 6 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Lumpfish MODERN SPECIES 21 ENSCLMG00005001029 CA12 (ENSCLMG00005001027) neil1 (ENSCLMG00005001024) commd4 (ENSCLMG00005001023) sema7a (ENSCLMG00005001021) islr2 (ENSCLMG00005001020) stra6 (ENSCLMG00005001018) ENSCLMG00005001017 cyp11a1.1 (ENSCLMG00005001002) stoml1 (ENSCLMG00005001000) nr2e3 (ENSCLMG00005000996) hexa (ENSCLMG00005000513) arih1 (ENSCLMG00005000474) ENSCLMG00005000456 ppcdc (ENSCLMG00005000450) hacd3 (ENSCLMG00005000359) #22 ints14 (ENSCLMG00005000331) #23 SLC24A1 (ENSCLMG00005000323) #24 ENSCLMG00005000266 ##25 ENSCLMG00005000242 ##27 map2k1 (ENSCLMG00005000174) #30 RPL4 (ENSCLMG00005019911) #32 rpl4 (ENSCLMG00005019898) #32 zwilch (ENSCLMG00005019897) #33 LCTL (ENSCLMG00005019896) #34 snapc5 (ENSCLMG00005019894) #31 smad6b (ENSCLMG00005019893) #35 smad3b (ENSCLMG00005019769) #37 aagab (ENSCLMG00005019765) iqch (ENSCLMG00005019726) zgc:162898 (ENSCLMG00005019722) Stickleback MODERN SPECIES 14 usp3 (ENSGACG00000004578) ENSGACG00000004593 CA12 (ENSGACG00000004596) MAN2C1 (ENSGACG00000004613) neil1 (ENSGACG00000004670) commd4 (ENSGACG00000004675) sema7a (ENSGACG00000004680) islr2 (ENSGACG00000004691) stra6 (ENSGACG00000004695) cyp11a1.1 (ENSGACG00000004713) stoml1 (ENSGACG00000004724) nr2e3 (ENSGACG00000004739) hexa (ENSGACG00000004744) arih1 (ENSGACG00000004772) ppcdc (ENSGACG00000004795) hacd3 (ENSGACG00000004806) #22 ints14 (ENSGACG00000004827) #23 SLC24A1 (ENSGACG00000004859) #24 ENSGACG00000004867 ##25 ENSGACG00000004885 ##27 map2k1 (ENSGACG00000004903) #30 rpl4 (ENSGACG00000004968) #32 zwilch (ENSGACG00000005043) #33 LCTL (ENSGACG00000005057) #34 snapc5 (ENSGACG00000005078) #31 smad6b (ENSGACG00000005085) #35 smad3b (ENSGACG00000005092) #37 aagab (ENSGACG00000005119) iqch (ENSGACG00000005158) zgc:162898 (ENSGACG00000005167) skor1b (ENSGACG00000005171) Ovalentaria ANCESTRAL SPECIES 7 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Ovalentaria_B ANCESTRAL SPECIES 3 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Pomacentridae ANCESTRAL SPECIES 1 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Pomacentridae_A ANCESTRAL SPECIES 9 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Amphiprion ANCESTRAL SPECIES 4 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Orange clownfish MODERN SPECIES 18 CA12 (ENSAPEG00000019875) MAN2C1 (ENSAPEG00000019898) neil1 (ENSAPEG00000019963) commd4 (ENSAPEG00000019980) sema7a (ENSAPEG00000020006) islr2 (ENSAPEG00000020024) stra6 (ENSAPEG00000020048) ENSAPEG00000020184 cyp11a1.1 (ENSAPEG00000020236) stoml1 (ENSAPEG00000020245) nr2e3 (ENSAPEG00000020258) hexa (ENSAPEG00000020294) arih1 (ENSAPEG00000020341) ENSAPEG00000020412 ppcdc (ENSAPEG00000020454) hacd3 (ENSAPEG00000020472) #22 ints14 (ENSAPEG00000020521) #23 SLC24A1 (ENSAPEG00000020557) #24 SLC24A1 (ENSAPEG00000020576) #24 ENSAPEG00000020590 ##25 ENSAPEG00000020674 ##27 map2k1 (ENSAPEG00000020723) #30 rpl4 (ENSAPEG00000020765) #32 zwilch (ENSAPEG00000020879) #33 LCTL (ENSAPEG00000021009) #34 snapc5 (ENSAPEG00000021082) #31 smad6b (ENSAPEG00000021097) #35 smad3b (ENSAPEG00000021121) #37 aagab (ENSAPEG00000021154) iqch (ENSAPEG00000021177) zgc:162898 (ENSAPEG00000021209) Clown anemonefish MODERN SPECIES 1514 hexa (ENSAOCG00000016836) arih1 (ENSAOCG00000001167) ENSAOCG00000016954 ppcdc (ENSAOCG00000016978) hacd3 (ENSAOCG00000017010) #22 ints14 (ENSAOCG00000017070) #23 SLC24A1 (ENSAOCG00000017229) #24 SLC24A1 (ENSAOCG00000017271) #24 ENSAOCG00000017453 ##25 Spiny chromis MODERN SPECIES 6 CA12 (ENSAPOG00000006900) MAN2C1 (ENSAPOG00000006998) neil1 (ENSAPOG00000007020) commd4 (ENSAPOG00000007030) sema7a (ENSAPOG00000007069) islr2 (ENSAPOG00000007082) stra6 (ENSAPOG00000007157) ENSAPOG00000007178 cyp11a1.1 (ENSAPOG00000007214) stoml1 (ENSAPOG00000007241) nr2e3 (ENSAPOG00000007343) hexa (ENSAPOG00000007374) arih1 (ENSAPOG00000007442) ENSAPOG00000007458 ppcdc (ENSAPOG00000007489) hacd3 (ENSAPOG00000007552) #22 ints14 (ENSAPOG00000007621) #23 SLC24A1 (ENSAPOG00000007942) #24 SLC24A1 (ENSAPOG00000008141) #24 ENSAPOG00000008269 ##25 ENSAPOG00000008421 ##27 map2k1 (ENSAPOG00000008515) #30 rpl4 (ENSAPOG00000008471) #32 zwilch (ENSAPOG00000008541) #33 LCTL (ENSAPOG00000008616) #34 snapc5 (ENSAPOG00000008638) #31 smad6b (ENSAPOG00000008675) #35 smad3b (ENSAPOG00000008731) #37 aagab (ENSAPOG00000008748) iqch (ENSAPOG00000008805) zgc:162898 (ENSAPOG00000008823) Bicolor damselfish MODERN SPECIES 317 ENSSPAG00000018019 ENSSPAG00000018039 neil1 (ENSSPAG00000018067) commd4 (ENSSPAG00000018089) sema7a (ENSSPAG00000018133) islr2 (ENSSPAG00000018158) stra6 (ENSSPAG00000018165) ENSSPAG00000018213 cyp11a1.1 (ENSSPAG00000018244) stoml1 (ENSSPAG00000018284) nr2e3 (ENSSPAG00000018358) hexa (ENSSPAG00000018566) arih1 (ENSSPAG00000018619) ENSSPAG00000018683 ppcdc (ENSSPAG00000018714) hacd3 (ENSSPAG00000018731) #22 ints14 (ENSSPAG00000018803) #23 SLC24A1 (ENSSPAG00000018853) #24 SLC24A1 (ENSSPAG00000018871) #24 ENSSPAG00000018896 ##25 ENSSPAG00000018936 ##27 map2k1 (ENSSPAG00000018984) #30 rpl4 (ENSSPAG00000019006) #32 zwilch (ENSSPAG00000019063) #33 LCTL (ENSSPAG00000019086) #34 snapc5 (ENSSPAG00000019113) #31 smad6b (ENSSPAG00000019122) #35 smad3b (ENSSPAG00000019142) #37 aagab (ENSSPAG00000019178) iqch (ENSSPAG00000019195) zgc:162898 (ENSSPAG00000019226) Cichlidae ANCESTRAL SPECIES 5 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C.b ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C.b ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Nile tilapia MODERN SPECIES 19 CA12 (ENSONIG00000015363) MAN2C1 (ENSONIG00000015370) neil1 (ENSONIG00000015377) commd4 (ENSONIG00000015379) sema7a (ENSONIG00000015382) ENSONIG00000031360 islr2 (ENSONIG00000020970) stra6 (ENSONIG00000015383) ENSONIG00000015388 cyp11a1.1 (ENSONIG00000015391) nr2e3 (ENSONIG00000015396) hexa (ENSONIG00000015399) arih1 (ENSONIG00000015404) ENSONIG00000038771 ppcdc (ENSONIG00000015408) hacd3 (ENSONIG00000015409) #22 ints14 (ENSONIG00000015414) #23 ENSONIG00000042969 #24 SLC24A1 (ENSONIG00000015416) #24 ENSONIG00000015421 ##25 ENSONIG00000015428 ##27 ENSONIG00000034322 map2k1 (ENSONIG00000041722) #30 rpl4 (ENSONIG00000015438) #32 zwilch (ENSONIG00000015453) #33 LCTL (ENSONIG00000015457) #34 snapc5 (ENSONIG00000015460) #31 smad6 (ENSONIG00000027979) #35 smad3b (ENSONIG00000015464) #37 aagab (ENSONIG00000039374) iqch (ENSONIG00000015469) Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C.b ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Haplochromini ANCESTRAL SPECIES ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C.b ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b.a #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Haplochromini_A ANCESTRAL SPECIES 1 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C.b ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b.a #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Haplochromini_B ANCESTRAL SPECIES 28 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C.b ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b.a #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 ENSGT00940000158440.g.b Zebra mbuna MODERN SPECIES 1110 ENSMZEG00005022516 CA12 (ENSMZEG00005022519) MAN2C1 (ENSMZEG00005022527) neil1 (ENSMZEG00005022536) commd4 (ENSMZEG00005022541) sema7a (ENSMZEG00005022544) islr2 (ENSMZEG00005022548) stra6 (ENSMZEG00005022550) cyp11a1.1 (ENSMZEG00005022555) stoml1 (ENSMZEG00005022560) nr2e3 (ENSMZEG00005022568) hexa (ENSMZEG00005022579) arih1 (ENSMZEG00005022582) ENSMZEG00005022585 ppcdc (ENSMZEG00005022599) hacd3 (ENSMZEG00005022607) #22 ints14 (ENSMZEG00005022613) #23 SLC24A1 (ENSMZEG00005022618) #24 ENSMZEG00005022627 ##25 ENSMZEG00005022640 ##27 map2k1 (ENSMZEG00005022643) #30 rpl4 (ENSMZEG00005022644) #32 zwilch (ENSMZEG00005022662) #33 LCTL (ENSMZEG00005022665) #34 snapc5 (ENSMZEG00005022673) #31 smad6b (ENSMZEG00005022680) #35 smad3b (ENSMZEG00005022682) #37 aagab (ENSMZEG00005022686) iqch (ENSMZEG00005022693) zgc:162898 (ENSMZEG00005022698) skor1b (ENSMZEG00005022702) Eastern happy MODERN SPECIES 19 CA12 (ENSACLG00000017374) MAN2C1 (ENSACLG00000017213) neil1 (ENSACLG00000017173) commd4 (ENSACLG00000017140) sema7a (ENSACLG00000017086) islr2 (ENSACLG00000017072) stra6 (ENSACLG00000017044) ENSACLG00000017028 cyp11a1.1 (ENSACLG00000016892) stoml1 (ENSACLG00000016876) nr2e3 (ENSACLG00000016858) hexa (ENSACLG00000016825) arih1 (ENSACLG00000016725) ENSACLG00000016653 ppcdc (ENSACLG00000016456) hacd3 (ENSACLG00000016337) #22 ints14 (ENSACLG00000016244) #23 SLC24A1 (ENSACLG00000016209) #24 ENSACLG00000015789 ##25 ENSACLG00000015528 ##27 map2k1 (ENSACLG00000015490) #30 rpl4 (ENSACLG00000015376) #32 zwilch (ENSACLG00000015306) #33 LCTL (ENSACLG00000015185) #34 snapc5 (ENSACLG00000015178) #31 smad6b (ENSACLG00000015060) #35 smad3b (ENSACLG00000015005) #37 aagab (ENSACLG00000014966) iqch (ENSACLG00000014950) zgc:162898 (ENSACLG00000014936) skor1b (ENSACLG00000014916) P. nyererei MODERN SPECIES 330 ENSPNYG00000012816 CA12 (ENSPNYG00000012827) MAN2C1 (ENSPNYG00000012842) neil1 (ENSPNYG00000012897) commd4 (ENSPNYG00000012913) sema7a (ENSPNYG00000012941) islr2 (ENSPNYG00000012974) stra6 (ENSPNYG00000013022) ENSPNYG00000013118 cyp11a1.1 (ENSPNYG00000013158) stoml1 (ENSPNYG00000013273) nr2e3 (ENSPNYG00000013295) hexa (ENSPNYG00000013367) arih1 (ENSPNYG00000013404) ENSPNYG00000013487 hacd3 (ENSPNYG00000013539) #22 ints14 (ENSPNYG00000013587) #23 SLC24A1 (ENSPNYG00000013638) #24 ENSPNYG00000013709 ##25 ENSPNYG00000013766 ##27 ENSPNYG00000013866 map2k1 (ENSPNYG00000014012) #30 rpl4 (ENSPNYG00000014038) #32 zwilch (ENSPNYG00000014254) #33 LCTL (ENSPNYG00000014382) #34 snapc5 (ENSPNYG00000014419) #31 smad6b (ENSPNYG00000014464) #35 smad3b (ENSPNYG00000014483) #37 aagab (ENSPNYG00000014514) iqch (ENSPNYG00000014565) zgc:162898 (ENSPNYG00000014663) Burton s mouthbrooder MODERN SPECIES 368 CA12 (ENSHBUG00000014064) MAN2C1 (ENSHBUG00000014037) neil1 (ENSHBUG00000013915) commd4 (ENSHBUG00000013910) sema7a (ENSHBUG00000013895) islr2 (ENSHBUG00000013882) stra6 (ENSHBUG00000013870) ENSHBUG00000013854 cyp11a1.1 (ENSHBUG00000013842) stoml1 (ENSHBUG00000013845) nr2e3 (ENSHBUG00000013798) hexa (ENSHBUG00000013611) arih1 (ENSHBUG00000013587) ENSHBUG00000013489 ppcdc (ENSHBUG00000013452) hacd3 (ENSHBUG00000013444) #22 ints14 (ENSHBUG00000013409) #23 SLC24A1 (ENSHBUG00000013345) #24 ENSHBUG00000013307 ##25 ENSHBUG00000013075 ##27 ENSHBUG00000012853 map2k1 (ENSHBUG00000012769) #30 rpl4 (ENSHBUG00000012721) #32 zwilch (ENSHBUG00000012704) #33 LCTL (ENSHBUG00000012695) #34 snapc5 (ENSHBUG00000012617) #31 smad6b (ENSHBUG00000012608) #35 ENSHBUG00000012576 #37 Lyretail cichlid MODERN SPECIES 305 CA12 (ENSNBRG00000017306) MAN2C1 (ENSNBRG00000017224) ENSNBRG00000017209 neil1 (ENSNBRG00000017196) commd4 (ENSNBRG00000017154) sema7a (ENSNBRG00000017117) stra6 (ENSNBRG00000017079) ENSNBRG00000017050 cyp11a1.1 (ENSNBRG00000017032) stoml1 (ENSNBRG00000017016) nr2e3 (ENSNBRG00000016989) hexa (ENSNBRG00000016965) arih1 (ENSNBRG00000016929) ENSNBRG00000016913 ppcdc (ENSNBRG00000016756) hacd3 (ENSNBRG00000016668) #22 ints14 (ENSNBRG00000016618) #23 SLC24A1 (ENSNBRG00000016597) #24 ENSNBRG00000016316 ##25 ENSNBRG00000016229 ENSNBRG00000016155 ##27 map2k1 (ENSNBRG00000016125) #30 rpl4 (ENSNBRG00000015986) #32 zwilch (ENSNBRG00000015874) #33 LCTL (ENSNBRG00000015831) #34 snapc5 (ENSNBRG00000015818) #31 smad6b (ENSNBRG00000015802) #35 smad3b (ENSNBRG00000015781) #37 aagab (ENSNBRG00000015745) iqch (ENSNBRG00000015611) zgc:162898 (ENSNBRG00000015586) Midas cichlid MODERN SPECIES 385 CA12 (ENSACIG00000002627) MAN2C1 (ENSACIG00000002745) neil1 (ENSACIG00000002796) commd4 (ENSACIG00000002831) sema7a (ENSACIG00000002846) islr2 (ENSACIG00000002865) stra6 (ENSACIG00000002885) ENSACIG00000002930 cyp11a1.1 (ENSACIG00000002952) stoml1 (ENSACIG00000002988) nr2e3 (ENSACIG00000003032) hexa (ENSACIG00000003137) arih1 (ENSACIG00000003347) ENSACIG00000003474 ppcdc (ENSACIG00000003479) hacd3 (ENSACIG00000003504) #22 ints14 (ENSACIG00000003523) #23 SLC24A1 (ENSACIG00000003557) #24 ENSACIG00000003590 ##25 ENSACIG00000003648 ##27 map2k1 (ENSACIG00000003699) #30 rpl4 (ENSACIG00000003731) #32 zwilch (ENSACIG00000003822) #33 LCTL (ENSACIG00000003960) #34 snapc5 (ENSACIG00000004004) #31 smad6b (ENSACIG00000004032) #35 smad3b (ENSACIG00000004048) #37 aagab (ENSACIG00000004078) iqch (ENSACIG00000004210) zgc:162898 (ENSACIG00000004275) skor1b (ENSACIG00000004288) Atherinomorphae ANCESTRAL SPECIES 5 ENSGT00940000169460 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Oryzias ANCESTRAL SPECIES 16 ENSGT00940000169460 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516.q ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Oryzias_a ANCESTRAL SPECIES 1 ENSGT00940000169460 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516.q ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000015942 ENSGT00940000158440.g.b Japanese Medaka HdrR MODERN SPECIES 20 usp3 (ENSORLG00000007352) si:dkeyp-73b11.8 (ENSORLG00000023180) CA12 (ENSORLG00000007332) MAN2C1 (ENSORLG00000007320) neil1 (ENSORLG00000007274) commd4 (ENSORLG00000007253) sema7a (ENSORLG00000007240) islr2 (ENSORLG00000007233) stra6 (ENSORLG00000007226) cyp11a (ENSORLG00000007190) nr2e3 (ENSORLG00000007175) hexa (ENSORLG00000007169) arih1 (ENSORLG00000007132) ENSORLG00000007094 ppcdc (ENSORLG00000007090) hacd3 (ENSORLG00000007078) #22 ints14 (ENSORLG00000007056) #23 ENSORLG00000028299 #24 ENSORLG00000026631 SLC24A1 (ENSORLG00000007029) #24 ENSORLG00000007022 ##25 ENSORLG00000006997 ##27 map2k1 (ENSORLG00000006926) #30 rpl4 (ENSORLG00000006882) #32 zwilch (ENSORLG00000006863) #33 LCTL (ENSORLG00000006840) #34 ENSORLG00000025403 smad6b (ENSORLG00000006825) #35 smad3b (ENSORLG00000006803) #37 aagab (ENSORLG00000006754) zgc:162898 (ENSORLG00000006741) Chinese medaka MODERN SPECIES 766 si:dkeyp-73b11.8 (ENSOSIG00000021342) CA12 (ENSOSIG00000021346) MAN2C1 (ENSOSIG00000021353) neil1 (ENSOSIG00000021355) commd4 (ENSOSIG00000021362) sema7a (ENSOSIG00000021366) islr2 (ENSOSIG00000021367) stra6 (ENSOSIG00000021369) cyp11a1.1 (ENSOSIG00000021390) stoml1 (ENSOSIG00000021479) nr2e3 (ENSOSIG00000021481) hexa (ENSOSIG00000021507) arih1 (ENSOSIG00000021861) ENSOSIG00000021931 ppcdc (ENSOSIG00000021935) hacd3 (ENSOSIG00000021945) #22 ints14 (ENSOSIG00000022003) #23 ENSOSIG00000022075 #24 SLC24A1 (ENSOSIG00000022079) #24 ENSOSIG00000022109 ##25 ENSOSIG00000022181 ##27 map2k1 (ENSOSIG00000022353) #30 rpl4 (ENSOSIG00000022390) #32 zwilch (ENSOSIG00000022469) #33 LCTL (ENSOSIG00000022490) #34 snapc5 (ENSOSIG00000022501) #31 smad6b (ENSOSIG00000022504) #35 smad6b (ENSOSIG00000022510) #35 zgc:162898 (ENSOSIG00000000720) skor1b (ENSOSIG00000000726) PIAS1 (ENSOSIG00000000776) Oryzias_b ANCESTRAL SPECIES ENSGT00940000169460 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516.q ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Indian medaka MODERN SPECIES 15 si:dkeyp-73b11.8 (ENSOMEG00000022308) CA12 (ENSOMEG00000022269) MAN2C1 (ENSOMEG00000022198) neil1 (ENSOMEG00000022177) commd4 (ENSOMEG00000022164) sema7a (ENSOMEG00000022146) islr2 (ENSOMEG00000022120) stra6 (ENSOMEG00000022103) cyp11a1.1 (ENSOMEG00000022047) stoml1 (ENSOMEG00000021948) nr2e3 (ENSOMEG00000021925) hexa (ENSOMEG00000021908) arih1 (ENSOMEG00000021871) ENSOMEG00000021811 ppcdc (ENSOMEG00000021783) hacd3 (ENSOMEG00000021745) #22 ints14 (ENSOMEG00000021715) #23 ENSOMEG00000021660 #24 SLC24A1 (ENSOMEG00000021596) #24 ENSOMEG00000021522 ##25 ENSOMEG00000021299 ##27 map2k1 (ENSOMEG00000021273) #30 rpl4 (ENSOMEG00000021252) #32 zwilch (ENSOMEG00000021191) #33 LCTL (ENSOMEG00000021112) #34 snapc5 (ENSOMEG00000021026) #31 rps23 (ENSOMEG00000020987) ENSOMEG00000020930 ENSOMEG00000020915 pde12 (ENSOMEG00000020900) gmppb (ENSOMEG00000020863) Javanese ricefish MODERN SPECIES 20 usp3 (ENSOJAG00000018072) si:dkeyp-73b11.8 (ENSOJAG00000018029) CA12 (ENSOJAG00000018022) MAN2C1 (ENSOJAG00000017859) neil1 (ENSOJAG00000017851) commd4 (ENSOJAG00000017847) sema7a (ENSOJAG00000017835) islr2 (ENSOJAG00000017826) stra6 (ENSOJAG00000017706) cyp11a1.1 (ENSOJAG00000017367) nr2e3 (ENSOJAG00000017186) hexa (ENSOJAG00000015950) arih1 (ENSOJAG00000015474) ENSOJAG00000015447 ppcdc (ENSOJAG00000015440) hacd3 (ENSOJAG00000015219) #22 ints14 (ENSOJAG00000014921) #23 ENSOJAG00000014816 #24 SLC24A1 (ENSOJAG00000014806) #24 ENSOJAG00000014599 ##25 ENSOJAG00000013786 ##27 map2k1 (ENSOJAG00000013527) #30 rpl4 (ENSOJAG00000013399) #32 zwilch (ENSOJAG00000013246) #33 smad6b (ENSOJAG00000013057) #35 smad3b (ENSOJAG00000012829) #37 aagab (ENSOJAG00000012590) iqch (ENSOJAG00000012524) zgc:162898 (ENSOJAG00000012513) skor1b (ENSOJAG00000012503) PIAS1 (ENSOJAG00000012338) Cyprinodontiformes ANCESTRAL SPECIES 6 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Aplocheiloidei ANCESTRAL SPECIES 1 ENSGT00940000169460 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Mangrove rivulus MODERN SPECIES 6 si:dkeyp-73b11.8 (ENSKMAG00000018597) CA12 (ENSKMAG00000018610) MAN2C1 (ENSKMAG00000018638) neil1 (ENSKMAG00000018738) commd4 (ENSKMAG00000018762) sema7a (ENSKMAG00000018795) islr2 (ENSKMAG00000018821) stra6 (ENSKMAG00000018839) cyp11a1.1 (ENSKMAG00000018869) stoml1 (ENSKMAG00000018954) nr2e3 (ENSKMAG00000018965) hexa (ENSKMAG00000019076) arih1 (ENSKMAG00000019124) ENSKMAG00000019164 ppcdc (ENSKMAG00000019178) hacd3 (ENSKMAG00000019204) #22 ints14 (ENSKMAG00000019255) #23 ENSKMAG00000019281 #24 SLC24A1 (ENSKMAG00000019301) #24 ENSKMAG00000019332 ##25 ENSKMAG00000019409 ##27 map2k1 (ENSKMAG00000019462) #30 rpl4 (ENSKMAG00000019520) #32 zwilch (ENSKMAG00000019558) #33 LCTL (ENSKMAG00000019610) #34 snapc5 (ENSKMAG00000019691) #31 smad6b (ENSKMAG00000019704) #35 smad3b (ENSKMAG00000019721) #37 aagab (ENSKMAG00000019751) iqch (ENSKMAG00000019782) zgc:162898 (ENSKMAG00000019840) Turquoise killifish MODERN SPECIES 1622 ELAVL1 (ENSNFUG00015010628) ENSNFUG00015010623 TMEM259 (ENSNFUG00015010543) MAN2C1 (ENSNFUG00015010412) neil1 (ENSNFUG00015010400) COMMD4 (ENSNFUG00015010389) sema7a (ENSNFUG00015010368) islr2 (ENSNFUG00015010359) STRA6 (ENSNFUG00015010256) ENSNFUG00015010235 stoml1 (ENSNFUG00015010068) hexa (ENSNFUG00015009436) arih1 (ENSNFUG00015008852) ENSNFUG00015008829 ppcdc (ENSNFUG00015008823) hacd3 (ENSNFUG00015008677) #22 VWA9 (ENSNFUG00015008651) #23 SLC24A1 (ENSNFUG00015008646) #24 DENND4A (ENSNFUG00015008588) ##25 MEGF11 (ENSNFUG00015008461) ##27 MAP2K1 (ENSNFUG00015008325) #30 rpl4 (ENSNFUG00015008298) #32 ZWILCH (ENSNFUG00015008272) #33 LCTL (ENSNFUG00015008241) #34 snapc5 (ENSNFUG00015008236) #31 ENSNFUG00015008234 ENSNFUG00015008231 smad6b (ENSNFUG00015008229) #35 AAGAB (ENSNFUG00015008222) iqch (ENSNFUG00015008218) zgc:162898 (ENSNFUG00015008213) Cyprinodontoidei ANCESTRAL SPECIES 7 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 NAME_4 ANCESTRAL SPECIES 239 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 Sheepshead minnow MODERN SPECIES 1234 ENSCVAG00000017859 ENSCVAG00000017876 cyp11a1.1 (ENSCVAG00000018994) stoml1 (ENSCVAG00000019065) nr2e3 (ENSCVAG00000019105) hexa (ENSCVAG00000019285) arih1 (ENSCVAG00000019348) ENSCVAG00000019361 ppcdc (ENSCVAG00000019390) hacd3 (ENSCVAG00000019445) #22 ints14 (ENSCVAG00000019509) #23 ENSCVAG00000019518 #24 SLC24A1 (ENSCVAG00000019525) #24 ENSCVAG00000019665 ##25 ENSCVAG00000019731 ##27 Mummichog MODERN SPECIES 427 cyp11a1.1 (ENSFHEG00000004800) stoml1 (ENSFHEG00000004814) nr2e3 (ENSFHEG00000004863) hexa (ENSFHEG00000004895) arih1 (ENSFHEG00000004916) ENSFHEG00000004953 ppcdc (ENSFHEG00000004978) hacd3 (ENSFHEG00000005033) #22 ints14 (ENSFHEG00000005072) #23 ENSFHEG00000005166 #24 SLC24A1 (ENSFHEG00000005221) #24 ENSFHEG00000005229 ##25 ENSFHEG00000005284 ##27 map2k1 (ENSFHEG00000005313) #30 rpl4 (ENSFHEG00000005347) #32 zwilch (ENSFHEG00000005364) #33 LCTL (ENSFHEG00000005394) #34 snapc5 (ENSFHEG00000005401) #31 Poeciliinae ANCESTRAL SPECIES 3 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Poecilia ANCESTRAL SPECIES 5 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 NAME_6 ANCESTRAL SPECIES 38 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f.c #24 ENSGT01030000234532.B.e.b.f.d #24 ENSGT00940000155836.A ##25 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Amazon molly MODERN SPECIES 332 usp3 (ENSPFOG00000005634) ENSPFOG00000005738 ENSPFOG00000022767 neil1 (ENSPFOG00000005744) commd4 (ENSPFOG00000005797) sema7a (ENSPFOG00000005805) islr2 (ENSPFOG00000006027) stra6 (ENSPFOG00000006050) cyp11a1.1 (ENSPFOG00000006301) stoml1 (ENSPFOG00000006419) nr2e3 (ENSPFOG00000006516) hexa (ENSPFOG00000006640) arih1 (ENSPFOG00000006732) ENSPFOG00000006845 ppcdc (ENSPFOG00000006856) hacd3 (ENSPFOG00000006915) #22 ints14 (ENSPFOG00000006991) #23 ENSPFOG00000023612 #24 SLC24A1 (ENSPFOG00000007134) #24 ENSPFOG00000007336 ##25 ENSPFOG00000007620 ##27 map2k1 (ENSPFOG00000008205) #30 rpl4 (ENSPFOG00000008365) #32 zwilch (ENSPFOG00000008447) #33 LCTL (ENSPFOG00000008595) #34 snapc5 (ENSPFOG00000021667) #31 smad6b (ENSPFOG00000008775) #35 smad3b (ENSPFOG00000008802) #37 aagab (ENSPFOG00000008893) iqch (ENSPFOG00000008947) zgc:162898 (ENSPFOG00000009031) Sailfin molly MODERN SPECIES 1071 sema7a (ENSPLAG00000018864) islr2 (ENSPLAG00000018854) stra6 (ENSPLAG00000018841) cyp11a1.1 (ENSPLAG00000018795) stoml1 (ENSPLAG00000018773) nr2e3 (ENSPLAG00000018760) hexa (ENSPLAG00000018689) arih1 (ENSPLAG00000018325) ENSPLAG00000018299 ppcdc (ENSPLAG00000018268) hacd3 (ENSPLAG00000018238) #22 ints14 (ENSPLAG00000018192) #23 ENSPLAG00000018144 #24 SLC24A1 (ENSPLAG00000018133) #24 ENSPLAG00000018106 ##25 Guppy MODERN SPECIES 458 ENSPREG00000009480 CA12 (ENSPREG00000009520) MAN2C1 (ENSPREG00000009619) neil1 (ENSPREG00000009683) commd4 (ENSPREG00000009697) sema7a (ENSPREG00000009720) ENSPREG00000009748 #24 stra6 (ENSPREG00000009762) cyp11a1.1 (ENSPREG00000009807) stoml1 (ENSPREG00000009837) nr2e3 (ENSPREG00000009907) hexa (ENSPREG00000009965) arih1 (ENSPREG00000010115) ENSPREG00000010149 ppcdc (ENSPREG00000010163) hacd3 (ENSPREG00000010177) #22 ints14 (ENSPREG00000010197) #23 ENSPREG00000010239 #24 ENSPREG00000010304 ##25 ENSPREG00000010362 ##27 map2k1 (ENSPREG00000010418) #30 rpl4 (ENSPREG00000010449) #32 zwilch (ENSPREG00000010534) #33 LCTL (ENSPREG00000010570) #34 snapc5 (ENSPREG00000010651) #31 smad6b (ENSPREG00000010660) #35 smad3b (ENSPREG00000010683) #37 aagab (ENSPREG00000010705) iqch (ENSPREG00000010718) zgc:162898 (ENSPREG00000010732) skor1b (ENSPREG00000010750) Platyfish MODERN SPECIES 11 usp3 (ENSXMAG00000003362) ENSXMAG00000021406 CA12 (ENSXMAG00000003380) MAN2C1 (ENSXMAG00000015918) neil1 (ENSXMAG00000015912) commd4 (ENSXMAG00000015911) sema7a (ENSXMAG00000023435) stra6 (ENSXMAG00000015883) cyp11a1.1 (ENSXMAG00000015863) stoml1 (ENSXMAG00000015850) nr2e3 (ENSXMAG00000015842) hexa (ENSXMAG00000028285) arih1 (ENSXMAG00000015819) ENSXMAG00000022800 ppcdc (ENSXMAG00000015812) hacd3 (ENSXMAG00000015797) #22 ints14 (ENSXMAG00000015780) #23 ENSXMAG00000015778 #24 SLC24A1 (ENSXMAG00000015769) #24 ENSXMAG00000003464 ##25 ENSXMAG00000003498 ##27 map2k1 (ENSXMAG00000003499) #30 rpl4 (ENSXMAG00000029529) #32 zwilch (ENSXMAG00000003532) #33 LCTL (ENSXMAG00000003540) #34 snapc5 (ENSXMAG00000003549) #31 smad6b (ENSXMAG00000003550) #35 smad3b (ENSXMAG00000003553) #37 aagab (ENSXMAG00000003564) iqch (ENSXMAG00000003568) zgc:162898 (ENSXMAG00000022123) Pinecone sodierfish MODERN SPECIES 20 MAN2C1 (ENSMMDG00005011318) neil1 (ENSMMDG00005011310) commd4 (ENSMMDG00005011270) sema7a (ENSMMDG00005011266) ENSMMDG00005011262 islr2 (ENSMMDG00005011261) islr2 (ENSMMDG00005011258) stra6 (ENSMMDG00005011236) cyp11a1.1 (ENSMMDG00005010401) stoml1 (ENSMMDG00005010381) nr2e3 (ENSMMDG00005010313) hexa (ENSMMDG00005010279) arih1 (ENSMMDG00005010264) ENSMMDG00005010261 ppcdc (ENSMMDG00005010260) hacd3 (ENSMMDG00005010257) #22 ints14 (ENSMMDG00005010242) #23 SLC24A1 (ENSMMDG00005010216) #24 ENSMMDG00005010200 ##25 ENSMMDG00005010191 ##27 map2k1 (ENSMMDG00005010104) #30 rpl4 (ENSMMDG00005009927) #32 zwilch (ENSMMDG00005009915) #33 LCTL (ENSMMDG00005009714) #34 snapc5 (ENSMMDG00005009708) #31 smad6b (ENSMMDG00005009705) #35 smad3b (ENSMMDG00005009590) #37 aagab (ENSMMDG00005009566) iqch (ENSMMDG00005009565) zgc:162898 (ENSMMDG00005009564) skor1b (ENSMMDG00005009562) Cod MODERN SPECIES 22 si:dkeyp-73b11.8 (ENSGMOG00000008319) CA12 (ENSGMOG00000008322) MAN2C1 (ENSGMOG00000008323) neil1 (ENSGMOG00000023007) commd4 (ENSGMOG00000008328) sema7a (ENSGMOG00000008331) islr2 (ENSGMOG00000008332) stra6 (ENSGMOG00000008334) ENSGMOG00000008336 cyp11a1.1 (ENSGMOG00000008338) nr2e3 (ENSGMOG00000008342) hexa (ENSGMOG00000008345) arih1 (ENSGMOG00000008347) ENSGMOG00000036344 ppcdc (ENSGMOG00000008350) hacd3 (ENSGMOG00000008351) #22 ints14 (ENSGMOG00000008352) #23 SLC24A1 (ENSGMOG00000024598) #24 ENSGMOG00000008354 ##25 ENSGMOG00000036396 ENSGMOG00000008355 #26 ENSGMOG00000008356 ##27 map2k1 (ENSGMOG00000008358) #30 rpl4 (ENSGMOG00000008359) #32 zwilch (ENSGMOG00000008360) #33 LCTL (ENSGMOG00000008361) #34 snapc5 (ENSGMOG00000036981) #31 smad6b (ENSGMOG00000008363) #35 smad3b (ENSGMOG00000029371) #37 aagab (ENSGMOG00000008365) zgc:162898 (ENSGMOG00000008367) Protacanthopterygii ANCESTRAL SPECIES 10 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00390000015516 ENSGT00940000158358.a ENSGT00940000160967.e ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744.t.b ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.A ##25 ENSGT00940000154914.wb #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b.j #35 ENSGT00940000153499.b.b.d.a.b #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00390000015942 Salmoninae ANCESTRAL SPECIES 271 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b ENSGT00390000003748 ENSGT00940000157850 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00940000158358.a ENSGT00940000160967.e.d ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT00940000155836.A ##25 ENSGT00940000154914.wb #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145 #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331 #31 ENSGT00940000158146.b.j #35 ENSGT00940000153499.b.b.d.a.b.g #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00940000158440.g.b.g.b ENSGT01030000234539.a.a.b.a.b.a.b.c.b Huchen MODERN SPECIES 9706 ENSHHUG00000007697 #22 Salmoninae_a ANCESTRAL SPECIES 9 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b.d ENSGT00390000003748 ENSGT00940000157850 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00940000158358.a ENSGT00940000160967.e.d ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT00940000155836.A ##25 ENSGT00940000154914.wb.b #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145.q #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331.k.a #31 ENSGT00940000158146.b.j #35 ENSGT00940000153499.b.b.d.a.b.g #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00940000158440.g.b.g.b ENSGT01030000234539.a.a.b.a.b.a.b.c.b Oncorhynchus ANCESTRAL SPECIES 90 ENSGT00940000153424.a.a.c.b.d ENSGT00390000003748 ENSGT00940000157850 ENSGT01030000234953.d ENSGT01100000264496 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00940000158358.a ENSGT00940000160967.e.d ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107.n ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT00940000155836.A ##25 ENSGT00940000154914.wb.b #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145.q #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331.k.a #31 ENSGT00940000158146.b.j #35 ENSGT00940000153499.b.b.d.a.b.g #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00940000158440.g.b.g.b ENSGT01030000234539.a.a.b.a.b.a.b.c.b Oncorhynchus_a ANCESTRAL SPECIES 115 ENSGT00940000153424.a.a.c.b.d ENSGT00390000003748 ENSGT00940000157850 ENSGT01030000234953.d ENSGT01100000264496 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00940000158358.a ENSGT00940000160967.e.d ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107.n ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT00940000155836.A ##25 ENSGT00940000154914.wb.b #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145.q #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00390000010331.k.a #31 ENSGT00390000010331.l #31 ENSGT00940000158146.b.j #35 Coho salmon MODERN SPECIES 1 usp3 (ENSOKIG00005013832) ENSOKIG00005014949 ENSOKIG00005014964 ENSOKIG00005014975 CA12 (ENSOKIG00005014986) MAN2C1 (ENSOKIG00005015148) ENSOKIG00005018089 neil1 (ENSOKIG00005018095) sema7a (ENSOKIG00005018119) islr2 (ENSOKIG00005018126) stra6 (ENSOKIG00005018139) ENSOKIG00005018210 stoml1 (ENSOKIG00005018220) ARIH1 (ENSOKIG00005018296) ppcdc (ENSOKIG00005018398) hacd3 (ENSOKIG00005018449) #22 ints14 (ENSOKIG00005018507) #23 ENSOKIG00005018559 ENSOKIG00005018622 ##25 rab11a (ENSOKIG00005018981) #26 ENSOKIG00005019075 ##27 ENSOKIG00005019846 ENSOKIG00005019852 ENSOKIG00005019867 ENSOKIG00005019877 ENSOKIG00005019888 map2k1 (ENSOKIG00005019896) #30 rpl4 (ENSOKIG00005019951) #32 zwilch (ENSOKIG00005020066) #33 LCTL (ENSOKIG00005020135) #34 snapc5 (ENSOKIG00005020275) #31 Chinook salmon MODERN SPECIES 525 ENSOTSG00005023570 hacd3 (ENSOTSG00005023572) #22 ints14 (ENSOTSG00005023573) #23 ENSOTSG00005023574 ##25 Rainbow trout MODERN SPECIES 22 ENSOMYG00000070598 ENSOMYG00000060982 ENSOMYG00000050383 CA12 (ENSOMYG00000015551) ENSOMYG00000015565 neil1 (ENSOMYG00000015576) sema7a (ENSOMYG00000015585) islr2 (ENSOMYG00000056245) stra6 (ENSOMYG00000015816) ENSOMYG00000067561 ENSOMYG00000057849 ENSOMYG00000050176 stoml1 (ENSOMYG00000015767) ENSOMYG00000058050 ppcdc (ENSOMYG00000023939) ENSOMYG00000048541 #22 ints14 (ENSOMYG00000015775) #23 ENSOMYG00000051025 ##25 rab11a (ENSOMYG00000028574) #26 map2k1 (ENSOMYG00000070762) #30 rpl4 (ENSOMYG00000015672) #32 zwilch (ENSOMYG00000064330) #33 LCTL (ENSOMYG00000051376) #34 snapc5 (ENSOMYG00000026529) #31 smad6b (ENSOMYG00000035050) #35 ENSOMYG00000074334 ENSOMYG00000055253 smad3b (ENSOMYG00000040088) #37 ENSOMYG00000023824 iqch (ENSOMYG00000073930) skor1b (ENSOMYG00000015835) Salmo ANCESTRAL SPECIES 91 ENSGT00940000157737 ENSGT00940000153424.a.a.c.b.d ENSGT00390000003748 ENSGT00940000157850 ENSGT01030000234953 ENSGT00940000159282 ENSGT01030000234638.a ENSGT00940000153230.C ENSGT00940000158358.a ENSGT00940000160967.e.d ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107 ENSGT00530000062962.b.a.f #22 ENSGT00390000009486 #23 ENSGT00940000155836.A ##25 ENSGT00940000154914.wb.b #26 ENSGT00940000155333.A.b ##27 ENSGT00940000153487.b.b #30 ENSGT00390000018145.q #32 ENSGT00390000013696 #33 ENSGT00940000157369.a #34 ENSGT00940000180676 ENSGT00940000158146.b.j #35 ENSGT00940000153499.b.b.d.a.b.g #37 ENSGT00390000007218 ENSGT00390000008908 ENSGT00940000158440.g.b.g.b ENSGT01030000234539.a.a.b.a.b.a.b.c.b River trout MODERN SPECIES 33 fbxl22 (ENSSTUG00000016337) usp3 (ENSSTUG00000015799) ENSSTUG00000015713 CA12 (ENSSTUG00000015698) MAN2C1 (ENSSTUG00000015308) ENSSTUG00000015251 neil1 (ENSSTUG00000015239) sema7a (ENSSTUG00000015219) islr2 (ENSSTUG00000015212) stra6 (ENSSTUG00000015174) stoml1 (ENSSTUG00000015155) arih1l (ENSSTUG00000015055) ppcdc (ENSSTUG00000015044) ENSSTUG00000015031 ENSSTUG00000015027 hacd3 (ENSSTUG00000014954) #22 ints14 (ENSSTUG00000014861) #23 ENSSTUG00000014342 ##25 RAB11B (ENSSTUG00000014285) ENSSTUG00000014230 ##27 map2k1 (ENSSTUG00000014171) #30 rpl4 (ENSSTUG00000014130) #32 zwilch (ENSSTUG00000014067) #33 LCTL (ENSSTUG00000013900) #34 ENSSTUG00000013877 ENSSTUG00000013846 smad6b (ENSSTUG00000013843) #35 smad3b (ENSSTUG00000013733) #37 aagab (ENSSTUG00000013689) iqch (ENSSTUG00000013633) ENSSTUG00000009581 Atlantic salmon MODERN SPECIES 15 usp3 (ENSSSAG00000108007) ENSSSAG00000106997 ENSSSAG00000085885 ENSSSAG00000118913 ENSSSAG00000090937 ENSSSAG00000008687 ENSSSAG00000115163 ENSSSAG00000098331 ENSSSAG00000098361 islr2 (ENSSSAG00000098188) stra6 (ENSSSAG00000103656) ENSSSAG00000009328 stoml1 (ENSSSAG00000009303) ENSSSAG00000098010 ppcdc (ENSSSAG00000010656) hacd3 (ENSSSAG00000009344) #22 ints14 (ENSSSAG00000106122) #23 ENSSSAG00000009435 ##25 rab11a (ENSSSAG00000083201) #26 ENSSSAG00000086055 ##27 map2k1 (ENSSSAG00000073424) #30 rpl4 (ENSSSAG00000008596) #32 zwilch (ENSSSAG00000008578) #33 LCTL (ENSSSAG00000073442) #34 snapc5 (ENSSSAG00000102443) #31 ENSSSAG00000073427 ENSSSAG00000117817 smad6 (ENSSSAG00000073418) #35 smad3b (ENSSSAG00000115090) #37 aagab (ENSSSAG00000082892) iqch (ENSSSAG00000073414) Northern pike MODERN SPECIES 18 commd4 (ENSELUG00000003435) sema7a (ENSELUG00000000113) ENSELUG00000033859 islr2 (ENSELUG00000029779) islr2 (ENSELUG00000025122) stra6 (ENSELUG00000000108) pycr1b (ENSELUG00000030476) ENSELUG00000026709 cyp11a1.1 (ENSELUG00000003333) stoml1 (ENSELUG00000003307) nr2e3 (ENSELUG00000003264) hexa (ENSELUG00000003240) ARIH1 (ENSELUG00000003198) ENSELUG00000003161 ppcdc (ENSELUG00000003138) hacd3 (ENSELUG00000003118) #22 ints14 (ENSELUG00000003084) #23 SLC24A1 (ENSELUG00000003062) #24 ENSELUG00000003043 ##25 rab11a (ENSELUG00000025088) #26 ENSELUG00000002960 ##27 ENSELUG00000030296 map2k1 (ENSELUG00000002907) #30 ENSELUG00000002918 rpl4 (ENSELUG00000002885) #32 zwilch (ENSELUG00000002833) #33 ENSELUG00000029781 ENSELUG00000025180 LCTL (ENSELUG00000002819) #34 ENSELUG00000029160 ENSELUG00000032451 Osteoglossiformes ANCESTRAL SPECIES 68 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a #22 ENSGT00390000009486 #23 ENSGT01030000234532.B.e.b.f #24 ENSGT00940000155836.B #25 ENSGT00390000006367.d ENSGT00940000171216 ENSGT01050000244951.a.b.a.a.g.b ENSGT00940000160055 ENSGT00940000155948.b.a ENSGT00940000154910.b.b ENSGT00530000063472.b.b.a.b.a.a.h ENSGT00940000155960.b ENSGT00390000006758.b ENSGT00940000157402 ENSGT00950000182976.a.b ENSGT00440000037417.A P. kingsleyae MODERN SPECIES 10 idh3a (ENSPKIG00000000910) lrrc61 (ENSPKIG00000000874) CIB2 (ENSPKIG00000000834) SH2D7 (ENSPKIG00000000795) TBC1D2B (ENSPKIG00000000735) ENSPKIG00000000674 HERC1 (ENSPKIG00000000569) ENSPKIG00000000525 usp3 (ENSPKIG00000000507) ENSPKIG00000000496 CA12 (ENSPKIG00000000437) aph1b (ENSPKIG00000000382) stra6 (ENSPKIG00000000355) NR2E3 (ENSPKIG00000000334) ARIH1 (ENSPKIG00000024243) hacd3 (ENSPKIG00000024214) #22 ints14 (ENSPKIG00000024198) #23 SLC24A1 (ENSPKIG00000024187) #24 dennd4a (ENSPKIG00000024083) #25 far1 (ENSPKIG00000024015) PPFIBP2 (ENSPKIG00000023879) OLFML1 (ENSPKIG00000023812) SYT9 (ENSPKIG00000023797) spon1a (ENSPKIG00000023766) ENSPKIG00000023742 hipk3b (ENSPKIG00000023694) cstf3 (ENSPKIG00000023648) tcp11l1 (ENSPKIG00000023633) depdc7a (ENSPKIG00000023604) QSER1 (ENSPKIG00000023573) prrg4 (ENSPKIG00000023558) Asian bonytongue MODERN SPECIES 2 lrrc61 (ENSSFOG00015021415) CIB2 (ENSSFOG00015021440) ENSSFOG00015021456 TBC1D2B (ENSSFOG00015021474) ENSSFOG00015021507 HERC1 (ENSSFOG00015021579) ENSSFOG00015030343 usp3 (ENSSFOG00015021659) CA12 (ENSSFOG00015021689) aph1b (ENSSFOG00015021708) islr2 (ENSSFOG00015021787) stra6 (ENSSFOG00015021736) NR2E3 (ENSSFOG00015021798) arih1 (ENSSFOG00015021813) ENSSFOG00015021832 hacd3 (ENSSFOG00015021847) #22 ints14 (ENSSFOG00015021873) #23 SLC24A1 (ENSSFOG00015021891) #24 dennd4a (ENSSFOG00015021905) #25 far1 (ENSSFOG00015021951) sb:cb470 (ENSSFOG00015030305) PPFIBP2 (ENSSFOG00015021994) OLFML1 (ENSSFOG00015022031) SYT9 (ENSSFOG00015022038) spon1a (ENSSFOG00015022054) hipk3b (ENSSFOG00015022090) cstf3 (ENSSFOG00015022133) tcp11l1 (ENSSFOG00015022158) depdc7a (ENSSFOG00015022174) QSER1 (ENSSFOG00015022192) prrg4 (ENSSFOG00015022201) Spotted gar MODERN SPECIES 669 terb2 (ENSLOCG00000013718) ENSLOCG00000013720 sord (ENSLOCG00000013722) DUOX2 (ENSLOCG00000013727) DUOXA2 (ENSLOCG00000013747) GOLM2 (ENSLOCG00000013752) ctdspl2a (ENSLOCG00000013760) ENSLOCG00000013765 ENSLOCG00000013767 eif3ja (ENSLOCG00000013769) cilp (ENSLOCG00000013772) #15 ENSLOCG00000013774 parp16 (ENSLOCG00000013778) #16 IGDCC3 (ENSLOCG00000013782) #18 IGDCC4 (ENSLOCG00000013791) #19 hacd3 (ENSLOCG00000013803) #22 ints14 (ENSLOCG00000013812) #23 SLC24A1 (ENSLOCG00000013820) #24 dennd4a (ENSLOCG00000013827) #25 rab11a (ENSLOCG00000013835) #26 ENSLOCG00000013837 #27 dis3l (ENSLOCG00000013846) #28 tipin (ENSLOCG00000013854) #29 map2k1 (ENSLOCG00000013858) #30 rpl4 (ENSLOCG00000013867) #32 zwilch (ENSLOCG00000013873) #33 lctla (ENSLOCG00000013878) #34 crybgx (ENSLOCG00000013888) snapc5 (ENSLOCG00000013891) #31 smad6a (ENSLOCG00000013892) #35 smad3b (ENSLOCG00000013897) #37 Reedfish MODERN SPECIES 8 rbpms2b (ENSECRG00000021907) psma4 (ENSECRG00000021960) skic8 (ENSECRG00000021976) crabp1b (ENSECRG00000021993) ENSECRG00000022005 cpeb1b (ENSECRG00000022018) ENSECRG00000022030 ENSECRG00000022044 sin3aa (ENSECRG00000022057) ubl7a (ENSECRG00000022069) CHRNA3 (ENSECRG00000022109) cilp (ENSECRG00000022196) #15 parp16 (ENSECRG00000022209) #16 IGDCC3 (ENSECRG00000022218) #18 IGDCC4 (ENSECRG00000022233) #19 hacd3 (ENSECRG00000022248) #22 ints14 (ENSECRG00000016954) #23 SLC24A1 (ENSECRG00000016985) #24 dennd4a (ENSECRG00000017079) #25 ENSECRG00000017309 ENSECRG00000017340 ENSECRG00000017450 #27 dis3l (ENSECRG00000017497) #28 tipin (ENSECRG00000017552) #29 map2k1 (ENSECRG00000017617) #30 rpl4 (ENSECRG00000017761) #32 zwilch (ENSECRG00000017849) #33 lctla (ENSECRG00000017984) #34 crybgx (ENSECRG00000018775) snapc5 (ENSECRG00000018817) #31 smad6a (ENSECRG00000018835) #35 Elephant shark MODERN SPECIES 1490 BLOC1S6 (ENSCMIG00000018887) sqor (ENSCMIG00000018881) mibp2 (ENSCMIG00000018877) ENSCMIG00000018874 SPPL2A (ENSCMIG00000018858) trpm7 (ENSCMIG00000018835) USP50 (ENSCMIG00000018807) USP8 (ENSCMIG00000018799) gabpb1 (ENSCMIG00000018784) zgc:158482 (ENSCMIG00000018766) gatm (ENSCMIG00000018754) pde8a (ENSCMIG00000018732) ENSCMIG00000018718 ENSCMIG00000018715 HOMER2 (ENSCMIG00000018710) hacd3 (ENSCMIG00000018702) #22 ints14 (ENSCMIG00000018688) #23 SLC24A1 (ENSCMIG00000018682) #24 dennd4a (ENSCMIG00000018666) #25 rab11a (ENSCMIG00000018649) #26 MEGF11 (ENSCMIG00000018640) #27 dis3l (ENSCMIG00000018578) #28 tipin (ENSCMIG00000018527) #29 map2k1 (ENSCMIG00000018523) #30 zwilch (ENSCMIG00000018499) #33 rpl4 (ENSCMIG00000018485) #32 lctla (ENSCMIG00000018484) #34 crybgx (ENSCMIG00000018479) ENSCMIG00000018477 #31 si:ch211-107o10.3 (ENSCMIG00000018476) ENSCMIG00000018474 Cyclostomata ANCESTRAL SPECIES ENSGT00530000062962.b.a #22 Hagfish MODERN SPECIES 70 ENSEBUG00000010302 ENSEBUG00000007263 ENSEBUG00000010521 alg2 (ENSEBUG00000016209) ENSEBUG00000003783 ENSEBUG00000005385 ENSEBUG00000005969 #22 ENSEBUG00000016261 pwp2h (ENSEBUG00000003140) dnaja3a (ENSEBUG00000010459) coro7 (ENSEBUG00000006541) ENSEBUG00000011911 ENSEBUG00000001361 ENSEBUG00000005057 ENSEBUG00000008269 ENSEBUG00000006754 ENSEBUG00000012576 ENSEBUG00000004802 ENSEBUG00000014758 ENSEBUG00000005334 ENSEBUG00000015425 nutf2l (ENSEBUG00000004510) Vertebrata ANCESTRAL SPECIES ENSGT00530000062962.b.b ##22 Cyclostomata ANCESTRAL SPECIES ENSGT00530000062962.b.b ##22 Lamprey MODERN SPECIES 26 ENSPMAG00000002227 gjd6 (ENSPMAG00000002232) ENSPMAG00000002233 BNC1 (ENSPMAG00000002267) ENSPMAG00000002276 ENSPMAG00000002287 ##22 ENSPMAG00000002292 #8 yjefn3 (ENSPMAG00000002302) CILP2 (ENSPMAG00000002309) ##15 ENSPMAG00000002318 Hagfish MODERN SPECIES 489 ENSEBUG00000007225 ENSEBUG00000014048 ENSEBUG00000016752 ENSEBUG00000007336 ENSEBUG00000002321 ENSEBUG00000012208 ENSEBUG00000006517 ENSEBUG00000011006 ENSEBUG00000006529 ##22 ENSEBUG00000008473 ENSEBUG00000006861 ENSEBUG00000012623 Gnathostomata ANCESTRAL SPECIES 359 ENSGT00940000160194 ENSGT00950000182991.B ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.f ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 Euteleostomi ANCESTRAL SPECIES 522 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 Actinopterygii ANCESTRAL SPECIES 119 ENSGT00730000114722 ENSGT00940000163435 ENSGT00390000004945 ENSGT00940000156986 ENSGT00390000012666 ENSGT00940000159492 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a ENSGT00390000017246 ENSGT00940000157347 ENSGT00390000011081 ENSGT00940000161010 ENSGT00940000156228 ENSGT00940000167973 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00910000147694 ENSGT00940000156306 ENSGT00390000008787.a ENSGT00940000158926 ENSGT00940000158625 ENSGT00390000001670 ENSGT00940000153169.A.b.b ENSGT00940000156660 ENSGT00390000013285 ENSGT00940000156721 ENSGT00940000153745.b Neopterygii ANCESTRAL SPECIES 74 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT00390000002721 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00950000182938.b.b.b.a.b.a ENSGT00390000017246 ENSGT00940000157347 ENSGT00390000011081.q.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00910000147694 ENSGT00940000156306 ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b ENSGT00940000158006 ENSGT00550000074944 ENSGT00940000158695 ENSGT00890000139482 ENSGT00940000153246.a.a.b ENSGT00530000063506.A ENSGT00530000063555.A.a.a Osteoglossocephalai ANCESTRAL SPECIES 76 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00950000182924.B.a.a ENSGT00390000016307 ENSGT00390000001733 ENSGT01030000234625.C ENSGT00940000158395 ENSGT00950000182938.b.b.b.a.b.b ENSGT00950000182938.b.b.b.a.b.a ENSGT00390000017246 ENSGT00940000157347 ENSGT00390000011081.q.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00910000147694 ENSGT00940000156306 ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b ENSGT00940000158006 ENSGT00550000074944 ENSGT00940000158695 ENSGT00890000139482 ENSGT00940000153246.a.a.b ENSGT00940000154658.b.i.b ENSGT00940000157174.c Clupeocephala ANCESTRAL SPECIES 208 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00940000156306 ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b ENSGT00940000158006 ENSGT00550000074944 ENSGT00940000157910 ENSGT00940000156243 ENSGT00940000159642.e ENSGT00940000178140 ENSGT01100000263573.a.a.b ENSGT00940000154949.b Otomorpha ANCESTRAL SPECIES 145 ENSGT00940000155658 ENSGT00730000112044 ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00530000063821.b.b ENSGT00940000155397.a.b ENSGT00390000014293.a ENSGT00940000155429.a.a ENSGT00990000204039 ENSGT00940000156990 ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Clupeiformes ANCESTRAL SPECIES 226 ENSGT00940000155658 ENSGT00730000112044 ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00530000063821.b.b ENSGT00940000155397.a.b ENSGT00390000014293.a ENSGT00940000155429.a.a ENSGT00990000204039 ENSGT00940000156990 ENSGT00940000156337.c ENSGT00950000183027.b.b ENSGT00950000183054.a.a.a.a ENSGT00950000182924.A.b.a.b ENSGT00940000158985 Atlantic herring MODERN SPECIES 9 H2AZ1 (ENSCHAG00000002270) ENSCHAG00000002410 RASGRP2 (ENSCHAG00000002534) ENSCHAG00000003065 ENSCHAG00000003097 NRXN2 (ENSCHAG00000003236) ENSCHAG00000006527 ENSCHAG00000006540 ENSCHAG00000006560 ENSCHAG00000006594 ENSCHAG00000006621 ENSCHAG00000006663 ENSCHAG00000006671 kirrel1a (ENSCHAG00000006715) ndufs2 (ENSCHAG00000007869) hacd4 (ENSCHAG00000010111) ##22 ENSCHAG00000010170 mllt3 (ENSCHAG00000011337) ENSCHAG00000011371 ENSCHAG00000011377 ENSCHAG00000011404 slc1a1 (ENSCHAG00000011423) ENSCHAG00000011744 ENSCHAG00000011774 ENSCHAG00000011789 ENSCHAG00000011803 ENSCHAG00000011821 ENSCHAG00000011840 ENSCHAG00000011848 ENSCHAG00000011863 ADRA2C (ENSCHAG00000011932) Denticle herring MODERN SPECIES larp7 (ENSDCDG00000030079) plin2 (ENSDCDG00000030074) haus6 (ENSDCDG00000030053) DENND4C (ENSDCDG00000029771) ACER2 (ENSDCDG00000029759) ENSDCDG00000029756 ENSDCDG00000029754 ACO1 (ENSDCDG00000029709) sepsecs (ENSDCDG00000029683) lgi2a (ENSDCDG00000029679) dock11 (ENSDCDG00000023096) ENSDCDG00000022950 kirrel1a (ENSDCDG00000022254) ndufs2 (ENSDCDG00000021552) fcer1g (ENSDCDG00000021546) hacd4 (ENSDCDG00000021545) ##22 ENSDCDG00000020315 mllt3 (ENSDCDG00000020307) C4orf54 (ENSDCDG00000020306) trmt10a (ENSDCDG00000020305) spata6l (ENSDCDG00000020304) slc1a1 (ENSDCDG00000018776) RAP1GDS1 (ENSDCDG00000018603) tspan5a (ENSDCDG00000018556) ENSDCDG00000018547 frem1a (ENSDCDG00000018530) ENSDCDG00000018519 SYNPO2 (ENSDCDG00000018518) USP53 (ENSDCDG00000018506) ENSDCDG00000018501 MYOZ2 (ENSDCDG00000018492) Otophysi ANCESTRAL SPECIES 208 ENSGT01070000254383 ENSGT00510000047760 ENSGT00390000013368 ENSGT00600000085600 ENSGT00950000182899.C.b ENSGT00940000167021 ENSGT00390000005094.h ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000155658 ENSGT00730000112044 ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00940000157535.m.a ENSGT00940000159031 ENSGT00530000067688 ENSGT00940000157122.b.a ENSGT00390000002245 ENSGT00940000164407.b Characiphysae ANCESTRAL SPECIES 19 ENSGT00390000013368 ENSGT00600000085600 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00940000167021 ENSGT00390000005094.h ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000155658 ENSGT00730000112044.a ENSGT00730000112044.b ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.b ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00940000157535.m.a ENSGT00940000159031 ENSGT00530000067688 ENSGT00940000157122.b.a ENSGT00390000002245 ENSGT00940000164407.b ENSGT01100000263568.b.a.c.b.b.b ENSGT00940000166658.b ENSGT00390000014237 ENSGT00940000157482.e ENSGT00600000084617 Channel catfish MODERN SPECIES 26 zgc:112271 (ENSIPUG00000019184) slx1b (ENSIPUG00000019176) ENSIPUG00000019155 ENSIPUG00000019147 ENSIPUG00000019135 ENSIPUG00000019081 ENSIPUG00000019051 amdhd1 (ENSIPUG00000019028) snrpf (ENSIPUG00000018994) ntn4 (ENSIPUG00000018955) dock11 (ENSIPUG00000018875) ENSIPUG00000018866 KIRREL (ENSIPUG00000018766) ndufs2 (ENSIPUG00000018738) fcer1g (ENSIPUG00000018728) hacd4 (ENSIPUG00000018721) ##22 focad (ENSIPUG00000018654) ENSIPUG00000018632 ENSIPUG00000018617 ENSIPUG00000018610 ENSIPUG00000018595 trmt10a (ENSIPUG00000018586) pvrl4 (ENSIPUG00000018565) coro1b (ENSIPUG00000018532) ENSIPUG00000018526 dtx4a (ENSIPUG00000018511) msantd1 (ENSIPUG00000018500) ENSIPUG00000018479 ENSIPUG00000018460 ENSIPUG00000018450 ENSIPUG00000018439 Characiphysae_b ANCESTRAL SPECIES 18 ENSGT00390000013368 ENSGT00600000085600 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00940000167021 ENSGT00390000005094.h ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000155658 ENSGT00730000112044.a ENSGT00730000112044.b ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.b ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00940000157535.m.a ENSGT00940000159031 ENSGT00530000067688 ENSGT00940000157122.b.a ENSGT00390000002245 ENSGT00940000164407.b ENSGT01100000263568.b.a.c.b.b.b ENSGT00940000166658.b ENSGT00390000014237 ENSGT00940000157482.e ENSGT00600000084617 Characoidei ANCESTRAL SPECIES 9 ENSGT00510000047760 ENSGT00390000013368 ENSGT00600000085600 ENSGT00950000182899.C.b ENSGT00940000167021 ENSGT00390000005094.h ENSGT00390000008645 ENSGT00940000154818 ENSGT00940000156615.a ENSGT00940000155658 ENSGT00730000112044.a ENSGT00730000112044.b ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.b ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00940000157535.m.a ENSGT00940000159031 ENSGT00530000067688 ENSGT00940000157122.b.a ENSGT00390000002245 ENSGT00940000164407.b Red-bellied piranha MODERN SPECIES 341 ENSPNAG00000019399 ENSPNAG00000019364 ENSPNAG00000019239 ENSPNAG00000019172 amdhd1 (ENSPNAG00000019140) snrpf (ENSPNAG00000019117) ntn4 (ENSPNAG00000019079) dock11 (ENSPNAG00000019040) il13ra1 (ENSPNAG00000018591) il13ra1 (ENSPNAG00000006647) kirrel1a (ENSPNAG00000003536) ndufs2 (ENSPNAG00000005744) fcer1g (ENSPNAG00000005743) hacd4 (ENSPNAG00000018448) ##22 ENSPNAG00000018426 mllt3 (ENSPNAG00000018389) ENSPNAG00000018342 trmt10a (ENSPNAG00000018333) ENSPNAG00000018302 coro1b (ENSPNAG00000018240) ENSPNAG00000018192 dtx4a (ENSPNAG00000005460) msantd1 (ENSPNAG00000018103) ENSPNAG00000018087 ENSPNAG00000018041 Mexicana tetra MODERN SPECIES 7 KCNIP4 (ENSAMXG00000002428) ENSAMXG00000030994 ADGRA3 (ENSAMXG00000002446) gba3 (ENSAMXG00000002452) PPARGC1A (ENSAMXG00000002461) ENSAMXG00000043979 ntn4 (ENSAMXG00000007434) dock11 (ENSAMXG00000007450) il13ra1 (ENSAMXG00000007475) ENSAMXG00000044091 ENSAMXG00000029236 il13ra1 (ENSAMXG00000030064) kirrel1a (ENSAMXG00000011544) ndufs2 (ENSAMXG00000039771) fcer1g (ENSAMXG00000030191) hacd4 (ENSAMXG00000037245) ##22 FOCAD (ENSAMXG00000011494) mllt3 (ENSAMXG00000038404) ENSAMXG00000037906 trmt10a (ENSAMXG00000040069) ENSAMXG00000011426 coro1b (ENSAMXG00000040145) dtx4a (ENSAMXG00000011382) msantd1 (ENSAMXG00000011368) ENSAMXG00000011336 rpl34 (ENSAMXG00000035416) trmt44 (ENSAMXG00000011302) GPR78 (ENSAMXG00000029754) CPZ (ENSAMXG00000011274) ostc (ENSAMXG00000011265) etnppl (ENSAMXG00000011256) Electric eel MODERN SPECIES 277 hacd4 (ENSEEEG00000016630) ##22 FOCAD (ENSEEEG00000016638) ENSEEEG00000016671 ENSEEEG00000016672 mllt3 (ENSEEEG00000016674) trmt10a (ENSEEEG00000016677) ENSEEEG00000016680 coro1b (ENSEEEG00000016684) dtx4a (ENSEEEG00000016687) msantd1 (ENSEEEG00000016689) ENSEEEG00000016691 map4k2 (ENSEEEG00000016698) men1 (ENSEEEG00000016703) rtn3 (ENSEEEG00000016705) ZFTA (ENSEEEG00000016710) ecsit (ENSEEEG00000016711) Cyprinoidei ANCESTRAL SPECIES 14 ENSGT00390000006227 ENSGT01030000234638.b.a.b ENSGT00600000085600.a ENSGT00950000182899.C.b ENSGT00940000167021 ENSGT00390000005094.h ENSGT00390000008645 ENSGT00940000154818.c.b ENSGT00940000154818.c.a ENSGT00940000156615.a ENSGT00940000155658 ENSGT00730000112044 ENSGT00940000155795.f ENSGT00390000009529 ENSGT01090000260265.a ENSGT00530000062962.b.b ##22 ENSGT00940000163460.c.c.a.a.b ENSGT00390000004438 ENSGT00940000155903 ENSGT00730000111645.a ENSGT00530000063169.a ENSGT00940000157535.m.a ENSGT00940000159031 ENSGT00530000067688 ENSGT00940000157122.b.a ENSGT00390000002245 ENSGT00940000164407.b ENSGT01100000263495.E ENSGT00940000156819.b ENSGT00940000156996.f.a.b ENSGT00390000004124.j Cyprininae ANCESTRAL SPECIES 1 ENSGT00940000162428.n.a.a ENSGT00530000063506.B.m ENSGT00940000160134.i ENSGT00940000155384.b.b.b ENSGT00390000002849.f ENSGT00390000006227.b ENSGT00940000154818.c.a ENSGT00940000156615.a.h ENSGT00940000155658.i ENSGT00730000112044.c.a ENSGT00940000155795.f.a ENSGT00390000009529.c ENSGT01090000260265.a.b ENSGT00940000163460.c.c.a.a.a.a.a ENSGT01030000235195.a.a.b ENSGT00530000062962.b.b ##22 ENSGT00940000163460.c.c.a.a.b ENSGT00390000004438 ENSGT00940000155903.d.a ENSGT00730000111645.a.a ENSGT00530000063169.a.o ENSGT00940000157535.m.a.c ENSGT00940000159031.w ENSGT00940000157122.b.a.m.b ENSGT00390000002245.f ENSGT00940000164407.b.d ENSGT01100000263495.E.t ENSGT00940000156819.b.e Goldfish DUPLICATION Goldfish MODERN SPECIES 538 il13ra1 (ENSCARG00000060566) kirrel1a (ENSCARG00000060719) ndufs2 (ENSCARG00000061408) fcer1g (ENSCARG00000062622) ENSCARG00000062643 hacd4 (ENSCARG00000062646) ##22 ENSCARG00000062726 mllt3 (ENSCARG00000064629) Goldfish MODERN SPECIES 25 oxa1l (ENSCARG00000062789) slc7a7 (ENSCARG00000062928) ENSCARG00000063286 CCNB1IP1 (ENSCARG00000063313) ttc5 (ENSCARG00000063337) ENSCARG00000063526 ENSCARG00000063544 snrpf (ENSCARG00000063555) dock11 (ENSCARG00000063972) il13ra1 (ENSCARG00000068797) kirrel1a (ENSCARG00000068820) ndufs2 (ENSCARG00000068937) fcer1g (ENSCARG00000069388) ENSCARG00000069392 ENSCARG00000069393 hacd4 (ENSCARG00000069401) ##22 ENSCARG00000014867 mllt3 (ENSCARG00000016390) C4orf54 (ENSCARG00000016406) trmt10a (ENSCARG00000016415) ENSCARG00000016435 coro1b (ENSCARG00000016440) dtx4a (ENSCARG00000016451) msantd1 (ENSCARG00000016458) ENSCARG00000016469 znf16l (ENSCARG00000016504) ENSCARG00000016513 ENSCARG00000016545 nitr4a (ENSCARG00000016550) ENSCARG00000016590 ENSCARG00000016606 Cyprininae_a ANCESTRAL SPECIES 56 ENSGT00940000162428.n.a.a ENSGT00530000063506.B.m ENSGT00940000160134.i ENSGT00940000155384.b.b.b ENSGT00390000002849.f ENSGT00390000006227.b ENSGT00940000154818.c.a ENSGT00940000156615.a.h ENSGT00940000155658.i ENSGT00730000112044.c.a ENSGT00940000155795.f.a ENSGT00390000009529.c ENSGT01090000260265.a.b ENSGT00940000163460.c.c.a.a.a.a.a ENSGT01030000235195.a.a.b ENSGT00530000062962.b.b ##22 ENSGT00940000163460.c.c.a.a.b ENSGT00390000004438 ENSGT00940000155903.d.b ENSGT00940000155903.c ENSGT00530000063169.a.o ENSGT00530000063169.a.p ENSGT00940000157535.m.a.d ENSGT00940000159031.x ENSGT00940000157122.b.a.m.a ENSGT00390000002245.e ENSGT00940000164407.b.c.a ENSGT01100000263495.E.s ENSGT00940000156819.b.f ENSGT00940000156996.f.a.b.f ENSGT00390000004124.j.k Common carp reference MODERN SPECIES 6 oxa1l (ENSCCRG00000028571) ENSCCRG00000054717 ENSCCRG00000033133 ENSCCRG00000033049 ENSCCRG00000052932 snrpf (ENSCCRG00000074793) ntn4 (ENSCCRG00000062275) dock11 (ENSCCRG00000046886) il13ra1 (ENSCCRG00000000691) il13ra1 (ENSCCRG00000077415) kirrel1a (ENSCCRG00000027714) ndufs2 (ENSCCRG00000073072) fcer1g (ENSCCRG00000075761) ENSCCRG00000007670 ENSCCRG00000065539 hacd4 (ENSCCRG00000082126) ##22 zgc:194252 (ENSCCRG00000033879) ENSCCRG00000033330 mllt3 (ENSCCRG00000036651) ENSCCRG00000063642 ENSCCRG00000074112 ENSCCRG00000027692 ENSCCRG00000053126 dtx4a (ENSCCRG00000027681) msantd1 (ENSCCRG00000027677) ENSCCRG00000027673 ENSCCRG00000027656 znf16l (ENSCCRG00000027646) ENSCCRG00000079632 cd248a (ENSCCRG00000063147) ENSCCRG00000027529 Zebrafish MODERN SPECIES 22 MAN2B2 (ENSDARG00000079463) ENSDARG00000100946 si:ch211-212k18.8 (ENSDARG00000086421) ENSDARG00000055504 ENSDARG00000088656 ENSDARG00000036575 amdhd1 (ENSDARG00000007366) snrpf (ENSDARG00000105037) ntn4 (ENSDARG00000102066) dock11 (ENSDARG00000062485) il13ra1 (ENSDARG00000080020) kirrel1a (ENSDARG00000001634) ndufs2 (ENSDARG00000007526) fcer1g (ENSDARG00000103276) ENSDARG00000111708 hacd4 (ENSDARG00000102221) ##22 zgc:194252 (ENSDARG00000057142) ENSDARG00000022020 mllt3 (ENSDARG00000006754) C7H4orf54 (ENSDARG00000098379) trmt10a (ENSDARG00000036678) ENSDARG00000077419 coro1b (ENSDARG00000008660) ENSDARG00000099518 dtx4a (ENSDARG00000076302) msantd1 (ENSDARG00000078801) ENSDARG00000009610 znf16l (ENSDARG00000105532) ENSDARG00000067925 cd248a (ENSDARG00000103713) RCE1 (ENSDARG00000077909) Euteleosteomorpha ANCESTRAL SPECIES 183 ENSGT00940000153289.a.a.b ENSGT00940000157772 ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00940000156306 ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b ENSGT00940000158006 ENSGT00550000074944 ENSGT00940000158215 ENSGT00390000008250 ENSGT00950000182920.b.a.b.a.a ENSGT00390000007252.c ENSGT00940000154949.b ENSGT01100000263573.a.a.b Acanthomorphata ANCESTRAL SPECIES 222 ENSGT00390000000527 ENSGT00940000162334 ENSGT00940000157772 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a Euacanthomorphacea ANCESTRAL SPECIES 17 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00390000000527 ENSGT00940000162334 ENSGT00940000157772 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Percomorphaceae ANCESTRAL SPECIES 39 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Percomorphaceae_B ANCESTRAL SPECIES 19 ENSGT00940000153395.a ENSGT00940000159954 ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000180421 ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Percomorphaceae_C ANCESTRAL SPECIES 20 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000180421 ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Percomorphaceae_D ANCESTRAL SPECIES 20 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000180421 ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Carangaria ANCESTRAL SPECIES 20 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000180421 ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a Pleuronectoidei ANCESTRAL SPECIES 17 ENSGT00940000159954 ENSGT00940000159769.a.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000180421 ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00940000172047 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a ENSGT00940000157258 Tongue sole MODERN SPECIES ANK2 (ENSCSEG00000018198) ACO1 (ENSCSEG00000018262) DNMT3B (ENSCSEG00000018277) PAQR9 (ENSCSEG00000018284) ENSCSEG00000018286 frem1a (ENSCSEG00000018293) RAP1GDS1 (ENSCSEG00000018328) ENSCSEG00000018336 slc1a1 (ENSCSEG00000018344) spata6l (ENSCSEG00000018372) trmt10a (ENSCSEG00000018378) ENSCSEG00000018382 ENSCSEG00000018395 ENSCSEG00000018399 C4orf54 (ENSCSEG00000018405) hacd4 (ENSCSEG00000018410) ##22 ENSCSEG00000018417 mllt3 (ENSCSEG00000018464) H2AZ1 (ENSCSEG00000018489) ENSCSEG00000018501 ADAM33 (ENSCSEG00000018523) ENSCSEG00000018542 trappc14 (ENSCSEG00000018568) gal3st4 (ENSCSEG00000018579) ENSCSEG00000018580 ENSCSEG00000018606 ENSCSEG00000018732 PELI3 (ENSCSEG00000018740) RCE1 (ENSCSEG00000018936) ENSCSEG00000018943 AP1S1 (ENSCSEG00000018947) Turbot MODERN SPECIES ENSSMAG00000005108 cab39l (ENSSMAG00000005071) cdadc1 (ENSSMAG00000005048) rcbtb1 (ENSSMAG00000004983) ENSSMAG00000004940 tubgcp3 (ENSSMAG00000004863) ENSSMAG00000004696 ENSSMAG00000004680 arhgef7b (ENSSMAG00000004589) ENSSMAG00000004428 ENSSMAG00000004318 ENSSMAG00000004291 ENSSMAG00000004288 ENSSMAG00000023417 ENSSMAG00000004263 ENSSMAG00000004253 ##22 ENSSMAG00000004036 ENSSMAG00000004009 ENSSMAG00000003983 ENSSMAG00000003714 rwdd (ENSSMAG00000003737) ENSSMAG00000003759 ENSSMAG00000003768 ENSSMAG00000003777 ENSSMAG00000003781 ENSSMAG00000003790 ENSSMAG00000003841 ENSSMAG00000009095 ENSSMAG00000021486 ENSSMAG00000009089 ENSSMAG00000009084 Carangaria_A ANCESTRAL SPECIES 41 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00970000193381.a.b.a.b.a.b.a.a.a.a.b.b ENSGT00940000155306.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a Barramundi perch MODERN SPECIES 287 ACO1 (ENSLCAG00010021627) PAQR9 (ENSLCAG00010021736) ENSLCAG00010021743 frem1a (ENSLCAG00010021751) tspan5a (ENSLCAG00010021781) RAP1GDS1 (ENSLCAG00010021802) slc1a1 (ENSLCAG00010021858) spata6l (ENSLCAG00010021871) trmt10a (ENSLCAG00010021876) ENSLCAG00010021881 C4orf54 (ENSLCAG00010021882) hacd4 (ENSLCAG00010021884) ##22 ENSLCAG00010021891 mllt3 (ENSLCAG00010021914) H2AZ1 (ENSLCAG00010021932) ENSLCAG00010021973 ENSLCAG00010021978 ENSLCAG00010021988 rwdd (ENSLCAG00010022001) ENSLCAG00010022006 ing2 (ENSLCAG00010022011) ENSLCAG00010022015 ENSLCAG00010022018 slx1b (ENSLCAG00010022024) zgc:112271 (ENSLCAG00010022028) ENSLCAG00010022043 Seriola ANCESTRAL SPECIES 64 ENSGT00940000153395.a ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000158971 ENSGT00390000015545 Yellowtail amberjack MODERN SPECIES 3056 mad2l1 (ENSSLDG00000013709) ARSJ (ENSSLDG00000013725) camk2d1 (ENSSLDG00000013740) ANK2 (ENSSLDG00000013812) ACO1 (ENSSLDG00000013952) PAQR9 (ENSSLDG00000013992) ENSSLDG00000013997 frem1a (ENSSLDG00000014018) ENSSLDG00000014071 ENSSLDG00000014092 RAP1GDS1 (ENSSLDG00000014143) slc1a1 (ENSSLDG00000014207) ENSSLDG00000014251 trmt10a (ENSSLDG00000014264) ENSSLDG00000014288 hacd4 (ENSSLDG00000014299) ##22 ENSSLDG00000014324 mllt3 (ENSSLDG00000014370) H2AZ1 (ENSSLDG00000014399) ENSSLDG00000014420 ENSSLDG00000014443 ENSSLDG00000014458 ENSSLDG00000014482 ENSSLDG00000014501 ENSSLDG00000014507 rwdd (ENSSLDG00000014523) Greater amberjack MODERN SPECIES 49 ENSSDUG00000003180 ENSSDUG00000003159 ENSSDUG00000003091 ENSSDUG00000003039 ACO1 (ENSSDUG00000002984) PAQR9 (ENSSDUG00000002972) ENSSDUG00000002958 frem1a (ENSSDUG00000002894) ENSSDUG00000002881 ENSSDUG00000002856 RAP1GDS1 (ENSSDUG00000002766) slc1a1 (ENSSDUG00000002724) spata6l (ENSSDUG00000002715) trmt10a (ENSSDUG00000002688) ENSSDUG00000002668 hacd4 (ENSSDUG00000002651) ##22 ENSSDUG00000002589 mllt3 (ENSSDUG00000002558) H2AZ1 (ENSSDUG00000002527) ENSSDUG00000002505 ENSSDUG00000002489 ENSSDUG00000002460 ENSSDUG00000002432 ENSSDUG00000002423 ENSSDUG00000002416 rwdd (ENSSDUG00000002393) Anabantaria ANCESTRAL SPECIES 19 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00980000201372 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Zig-zag eel MODERN SPECIES 9 ENSMAMG00000003180 ENSMAMG00000003089 ENSMAMG00000002963 ENSMAMG00000002915 ENSMAMG00000002904 ENSMAMG00000027140 frem1a (ENSMAMG00000002508) ENSMAMG00000002471 tspan5a (ENSMAMG00000002417) ENSMAMG00000002355 slc1a1 (ENSMAMG00000002306) ENSMAMG00000002291 ENSMAMG00000002282 ENSMAMG00000002277 ENSMAMG00000002270 hacd4 (ENSMAMG00000002249) ##22 ENSMAMG00000002155 mllt3 (ENSMAMG00000002106) ENSMAMG00000002084 ENSMAMG00000002043 ENSMAMG00000001979 rwdd (ENSMAMG00000001945) ENSMAMG00000024756 ENSMAMG00000001917 ENSMAMG00000024482 SLX1 (ENSMAMG00000025620) ENSMAMG00000001872 ENSMAMG00000025576 pygmb (ENSMAMG00000001816) sf1 (ENSMAMG00000001780) rbm4.1 (ENSMAMG00000001765) Anabantoidei ANCESTRAL SPECIES 22 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00980000201372 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a Siamese fighting fish MODERN SPECIES 10 ARSJ (ENSBSLG00000010364) camk2d1 (ENSBSLG00000008861) ACO1 (ENSBSLG00000008395) PAQR9 (ENSBSLG00000008360) ENSBSLG00000008339 frem1a (ENSBSLG00000008195) ENSBSLG00000008191 tspan5a (ENSBSLG00000008154) RAP1GDS1 (ENSBSLG00000008075) slc1a1 (ENSBSLG00000008046) spata6l (ENSBSLG00000008029) trmt10a (ENSBSLG00000008016) ENSBSLG00000008011 ENSBSLG00000007993 ENSBSLG00000007987 hacd4 (ENSBSLG00000007976) ##22 ENSBSLG00000007889 mllt3 (ENSBSLG00000007827) H2AZ1 (ENSBSLG00000007765) ENSBSLG00000007728 ENSBSLG00000007408 ADAM33 (ENSBSLG00000006874) rwdd (ENSBSLG00000006769) ENSBSLG00000006759 ing2 (ENSBSLG00000006746) ENSBSLG00000006726 ENSBSLG00000006698 ENSBSLG00000006655 ENSBSLG00000006509 slx1b (ENSBSLG00000006392) zgc:112271 (ENSBSLG00000006303) Climbing perch MODERN SPECIES 9 camk2d1 (ENSATEG00000000178) ANK2 (ENSATEG00000028978) ENSATEG00000000560 ENSATEG00000000649 ENSATEG00000000657 ENSATEG00000000719 frem1a (ENSATEG00000000746) ENSATEG00000029290 tspan5a (ENSATEG00000000935) ENSATEG00000000970 slc1a1 (ENSATEG00000001042) spata6l (ENSATEG00000028755) ENSATEG00000001123 ENSATEG00000001157 ENSATEG00000025549 hacd4 (ENSATEG00000001186) ##22 ENSATEG00000001189 mllt3 (ENSATEG00000001197) ENSATEG00000001259 ENSATEG00000001291 ENSATEG00000001304 ENSATEG00000001335 rwdd (ENSATEG00000001495) ENSATEG00000001543 ENSATEG00000001555 ENSATEG00000001569 ENSATEG00000001584 ENSATEG00000001605 BOLA2 (ENSATEG00000029758) ENSATEG00000001728 ENSATEG00000029238 Eupercaria ANCESTRAL SPECIES 19 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Tetraodontidae ANCESTRAL SPECIES 67 ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000153889.r ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT00950000182923.B.b ENSGT00390000014725.r.a ENSGT00940000156850.a.a ENSGT00940000160621 ENSGT00970000193372.a.b ENSGT00910000144784.a ENSGT00390000017407 ENSGT00940000157637.b Fugu MODERN SPECIES 20 tspan5a (ENSTRUG00000005732) RAP1GDS1 (ENSTRUG00000005313) sox19b (ENSTRUG00000005238) ENSTRUG00000004533 ENSTRUG00000004287 PELI3 (ENSTRUG00000004047) RCE1 (ENSTRUG00000003795) acox3 (ENSTRUG00000002688) ENSTRUG00000001283 ENSTRUG00000022211 SSTR4 (ENSTRUG00000001261) cd248a (ENSTRUG00000024794) ENSTRUG00000024613 slc1a1 (ENSTRUG00000000630) trmt10a (ENSTRUG00000019519) hacd4 (ENSTRUG00000028073) ##22 ENSTRUG00000032392 FOCAD (ENSTRUG00000000968) mllt3 (ENSTRUG00000001366) H2AZ1 (ENSTRUG00000033458) ENSTRUG00000001774 senp3b (ENSTRUG00000002077) EIF4A1 (ENSTRUG00000002188) mpdu1b (ENSTRUG00000022800) ENSTRUG00000022637 gal3st4 (ENSTRUG00000020160) trappc14 (ENSTRUG00000004263) ENSTRUG00000004421 ENSTRUG00000032876 serpine1 (ENSTRUG00000004818) ap1s1 (ENSTRUG00000022212) Tetraodon MODERN SPECIES 26 PURG (ENSTNIG00000001673) ENSTNIG00000001806 tpm2 (ENSTNIG00000005104) tln1 (ENSTNIG00000005103) ENSTNIG00000008388 hmgcs1 (ENSTNIG00000005102) ENSTNIG00000005086 hyal3 (ENSTNIG00000005084) amt (ENSTNIG00000005083) ifrd2 (ENSTNIG00000002348) zgc:136971 (ENSTNIG00000005082) sema3b (ENSTNIG00000005081) ENSTNIG00000005080 slc1a1 (ENSTNIG00000005078) trmt10a (ENSTNIG00000005077) hacd4 (ENSTNIG00000000968) ##22 ENSTNIG00000005076 ENSTNIG00000005075 ENSTNIG00000005058 ENSTNIG00000005057 ENSTNIG00000005056 ENSTNIG00000005055 TMEM50B (ENSTNIG00000005054) ENSTNIG00000005053 cavin1b (ENSTNIG00000005048) znf423 (ENSTNIG00000005047) shox2 (ENSTNIG00000005046) shox2 (ENSTNIG00000005045) ENSTNIG00000005044 ENSTNIG00000005043 gcm2 (ENSTNIG00000005042) Eupecaria_A ANCESTRAL SPECIES 20 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Ballan wrasse MODERN SPECIES 202 pde5ab (ENSLBEG00000013283) zcchc4 (ENSLBEG00000013353) ENSLBEG00000013399 ABLIM2 (ENSLBEG00000013428) AFAP1 (ENSLBEG00000013494) RAP1GDS1 (ENSLBEG00000013550) tspan5a (ENSLBEG00000013625) frem1a (ENSLBEG00000013674) ENSLBEG00000013803 PAQR9 (ENSLBEG00000013829) ACO1 (ENSLBEG00000013866) slc1a1 (ENSLBEG00000013947) ENSLBEG00000014003 trmt10a (ENSLBEG00000014032) ENSLBEG00000014050 hacd4 (ENSLBEG00000014068) ##22 ENSLBEG00000014253 mllt3 (ENSLBEG00000014586) H2AZ1 (ENSLBEG00000014657) ENSLBEG00000014690 ENSLBEG00000014717 ENSLBEG00000014743 Eupecaria_B ANCESTRAL SPECIES 20 ENSGT00940000159769.a.a ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Perciformes ANCESTRAL SPECIES 19 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Perciformes_a ANCESTRAL SPECIES 18 ENSGT00940000159954 ENSGT00940000159769.a.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Channel bull blenny MODERN SPECIES 9 ARSJ (ENSCGOG00000024752) ENSCGOG00000024748 ANK2 (ENSCGOG00000024701) ACO1 (ENSCGOG00000024452) ENSCGOG00000024413 ENSCGOG00000024412 ENSCGOG00000024411 frem1a (ENSCGOG00000024405) ENSCGOG00000024403 tspan5a (ENSCGOG00000024396) RAP1GDS1 (ENSCGOG00000024365) slc1a1 (ENSCGOG00000024346) ENSCGOG00000024343 trmt10a (ENSCGOG00000024342) C4orf54 (ENSCGOG00000024340) hacd4 (ENSCGOG00000024339) ##22 ENSCGOG00000024305 mllt3 (ENSCGOG00000024292) H2AZ1 (ENSCGOG00000024291) ENSCGOG00000024289 ENSCGOG00000024288 ENSCGOG00000024272 rwdd (ENSCGOG00000024269) ENSCGOG00000024267 ENSCGOG00000024264 ing2 (ENSCGOG00000024263) ENSCGOG00000024262 ENSCGOG00000024259 slx1b (ENSCGOG00000024260) zgc:112271 (ENSCGOG00000024258) ENSCGOG00000024255 Pike perch MODERN SPECIES 150 ENSSLUG00000013073 ENSSLUG00000012720 ENSSLUG00000009271 ARSJ (ENSSLUG00000009000) mad2l1 (ENSSLUG00000008991) pde5ab (ENSSLUG00000006137) zcchc4 (ENSSLUG00000005986) ABLIM2 (ENSSLUG00000005646) AFAP1 (ENSSLUG00000005580) C4orf54 (ENSSLUG00000005560) hacd4 (ENSSLUG00000005554) ##22 ENSSLUG00000005478 mllt3 (ENSSLUG00000005429) H2AZ1 (ENSSLUG00000005390) ENSSLUG00000005378 ENSSLUG00000005366 Cottioidei ANCESTRAL SPECIES 20 ENSGT00940000155475.h ENSGT00940000153395.a ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a ENSGT00940000157258 Stickleback MODERN SPECIES 417 pde5ab (ENSGACG00000000974) zcchc4 (ENSGACG00000000969) ABLIM2 (ENSGACG00000000966) AFAP1 (ENSGACG00000000961) tada2b (ENSGACG00000000960) grpel1 (ENSGACG00000000958) SORCS2 (ENSGACG00000000941) frem1a (ENSGACG00000000932) tspan5a (ENSGACG00000000929) RAP1GDS1 (ENSGACG00000000917) slc1a1 (ENSGACG00000000901) ENSGACG00000000900 trmt10a (ENSGACG00000000892) hacd4 (ENSGACG00000000890) ##22 ENSGACG00000000877 mllt3 (ENSGACG00000000874) H2AZ1 (ENSGACG00000000870) ENSGACG00000000867 ADAM33 (ENSGACG00000000862) rwdd (ENSGACG00000000853) ing2 (ENSGACG00000000852) ENSGACG00000000850 ENSGACG00000000848 slx1b (ENSGACG00000000846) zgc:112271 (ENSGACG00000000843) ENSGACG00000000840 pygmb (ENSGACG00000000827) sf1 (ENSGACG00000000826) rbm4.1 (ENSGACG00000000822) Lumpfish MODERN SPECIES 9 pde5ab (ENSCLMG00005005718) mad2l1 (ENSCLMG00005005688) ARSJ (ENSCLMG00005005666) ENSCLMG00005005601 ANK2 (ENSCLMG00005005554) ACO1 (ENSCLMG00005004953) PAQR9 (ENSCLMG00005004943) ENSCLMG00005004941 frem1a (ENSCLMG00005004935) ENSCLMG00005022994 ENSCLMG00005022993 RAP1GDS1 (ENSCLMG00005022967) slc1a1 (ENSCLMG00005022956) ENSCLMG00005022954 trmt10a (ENSCLMG00005022953) hacd4 (ENSCLMG00005022949) ##22 ENSCLMG00005022920 mllt3 (ENSCLMG00005022914) H2AZ1 (ENSCLMG00005022911) ENSCLMG00005022908 ENSCLMG00005022907 ENSCLMG00005022905 rwdd (ENSCLMG00005022903) ing2 (ENSCLMG00005022902) ENSCLMG00005022901 ENSCLMG00005022900 slx1b (ENSCLMG00005022899) zgc:112271 (ENSCLMG00005022898) ENSCLMG00005022897 pygmb (ENSCLMG00005022887) sf1 (ENSCLMG00005022886) Eupecaria_C ANCESTRAL SPECIES 20 ENSGT00940000159769.a.a ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00390000000527 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00940000172047 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a Gilthead seabream MODERN SPECIES 1 ENSSAUG00010005443 ENSSAUG00010005450 ENSSAUG00010005459 ENSSAUG00010005469 ENSSAUG00010005474 ENSSAUG00010005479 frem1a (ENSSAUG00010005493) ENSSAUG00010005512 tspan5a (ENSSAUG00010005515) RAP1GDS1 (ENSSAUG00010005544) slc1a1 (ENSSAUG00010006532) spata6l (ENSSAUG00010007052) trmt10a (ENSSAUG00010007055) ENSSAUG00010007057 ENSSAUG00010007058 hacd4 (ENSSAUG00010007059) ##22 FOCAD (ENSSAUG00010007062) ENSSAUG00010007085 ENSSAUG00010007086 ENSSAUG00010007087 H2AZ1 (ENSSAUG00010007088) ENSSAUG00010007096 ENSSAUG00010007097 ENSSAUG00010007099 rwdd (ENSSAUG00010007863) ENSSAUG00010007865 ing2 (ENSSAUG00010007869) ENSSAUG00010007870 ENSSAUG00010007873 slx1b (ENSSAUG00010007874) zgc:112271 (ENSSAUG00010007875) Eupercaria_incertae_sedis ANCESTRAL SPECIES 43 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a European seabass MODERN SPECIES 16 mad2l1 (ENSDLAG00005028659) ARSJ (ENSDLAG00005020204) ENSDLAG00005020179 camk2d1 (ENSDLAG00005020120) ENSDLAG00005007733 ENSDLAG00005006897 ENSDLAG00005031223 frem1a (ENSDLAG00005006751) ENSDLAG00005006736 tspan5a (ENSDLAG00005006709) ENSDLAG00005006523 slc1a1 (ENSDLAG00005033872) spata6l (ENSDLAG00005029816) ENSDLAG00005005736 ENSDLAG00005005734 hacd4 (ENSDLAG00005030706) ##22 ENSDLAG00005020745 mllt3 (ENSDLAG00005020690) ENSDLAG00005020632 ENSDLAG00005020613 ENSDLAG00005020588 ENSDLAG00005020468 ENSDLAG00005020452 ENSDLAG00005020426 ENSDLAG00005029711 ENSDLAG00005020414 ENSDLAG00005033178 ENSDLAG00005020392 ENSDLAG00005020377 pygmb (ENSDLAG00005020154) ENSDLAG00005028174 Large yellow croaker MODERN SPECIES 485 SLC29A2 (ENSLCRG00005014811) S100P (ENSLCRG00005014798) ENSLCRG00005014795 kiaa0232 (ENSLCRG00005014793) TBC1D14 (ENSLCRG00005013912) ENSLCRG00005013784 ccdc96 (ENSLCRG00005013782) tada2b (ENSLCRG00005013781) grpel1 (ENSLCRG00005013780) SORCS2 (ENSLCRG00005010899) AFAP1 (ENSLCRG00005010556) ABLIM2 (ENSLCRG00005010545) ENSLCRG00005010519 zcchc4 (ENSLCRG00005010485) C4orf54 (ENSLCRG00005010483) hacd4 (ENSLCRG00005010480) ##22 ENSLCRG00005009458 mllt3 (ENSLCRG00005009330) ENSLCRG00005009307 ENSLCRG00005009256 ENSLCRG00005009193 ENSLCRG00005008499 ENSLCRG00005008427 rwdd (ENSLCRG00005008424) ENSLCRG00005008423 ENSLCRG00005008420 ing2 (ENSLCRG00005008410) cd68 (ENSLCRG00005008405) ENSLCRG00005008404 slx1b (ENSLCRG00005008403) zgc:112271 (ENSLCRG00005008391) Ovalentaria ANCESTRAL SPECIES 20 ENSGT00940000168370 ENSGT00940000155475.h ENSGT00940000153395.a ENSGT00940000159954 ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Atherinomorphae ANCESTRAL SPECIES 34 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a.l ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Cyprinodontiformes ANCESTRAL SPECIES 29 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a.l ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 Aplocheiloidei ANCESTRAL SPECIES 49 ENSGT00940000153395.a ENSGT00940000159954.f ENSGT00940000155150.a ENSGT00940000155279.C.a.a.l ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000158194 ENSGT00940000169954 ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a ENSGT00940000157258 ENSGT00640000091486.a Mangrove rivulus MODERN SPECIES 98 tspan5a (ENSKMAG00000005254) RAP1GDS1 (ENSKMAG00000005283) slc1a1 (ENSKMAG00000005358) ENSKMAG00000005378 trmt10a (ENSKMAG00000005389) C4orf54 (ENSKMAG00000005410) hacd4 (ENSKMAG00000005415) ##22 ENSKMAG00000005440 mllt3 (ENSKMAG00000005494) H2AZ1 (ENSKMAG00000005524) ENSKMAG00000005560 ENSKMAG00000005618 rwdd (ENSKMAG00000005646) ing2 (ENSKMAG00000005666) ENSKMAG00000005679 ENSKMAG00000005701 slx1b (ENSKMAG00000005714) zgc:112271 (ENSKMAG00000005724) ENSKMAG00000005741 pygmb (ENSKMAG00000005773) sf1 (ENSKMAG00000005854) taf6l (ENSKMAG00000005885) Turquoise killifish MODERN SPECIES 1619 NXT2 (ENSNFUG00015017088) XIAP (ENSNFUG00015017129) ENSNFUG00015017131 ENSNFUG00015017137 ACO1 (ENSNFUG00015017153) PAQR9 (ENSNFUG00015017320) FREM1A (ENSNFUG00015017335) ENSNFUG00015017434 TSPAN5 (ENSNFUG00015017446) RAP1GDS1 (ENSNFUG00015017492) SLC1A1 (ENSNFUG00015017986) trmt10a (ENSNFUG00015018101) ENSNFUG00015018108 ENSNFUG00015018111 ENSNFUG00015018147 PTPLAD2 (ENSNFUG00015019119) ##22 mllt3 (ENSNFUG00015019124) H2AFVB (ENSNFUG00015019133) ENSNFUG00015019176 rwdd (ENSNFUG00015019195) ING2 (ENSNFUG00015019202) ENSNFUG00015019217 ENSNFUG00015019224 SLX1A (ENSNFUG00015019231) ENSNFUG00015019238 pygmb (ENSNFUG00015019298) sf1 (ENSNFUG00015022028) ENSNFUG00015022064 TAF6L (ENSNFUG00015022085) cth1 (ENSNFUG00015022111) mta2 (ENSNFUG00015022120) Cyprinodontoidei ANCESTRAL SPECIES 39 ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a.k.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT01030000240214 ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Poeciliinae ANCESTRAL SPECIES 28 ENSGT00940000163911.a.a.b.a.a.a.b.d.b.a ENSGT00940000174504.A.d.a ENSGT01030000234978.a.b.a ENSGT00940000174504.A.d.b ENSGT00950000182968.d.a.b.b.a.b ENSGT00950000182968.d.a.b.b.a.a ENSGT00950000182968.d.a.a.a.d.a.a.b.a.a.b.a ENSGT00940000163911.a.a.b.a.a.a.b.c ENSGT01030000234563.b.a.a ENSGT00390000005589.a.a ENSGT00940000157318 ENSGT00950000183337 ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438.k ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Poecilia ANCESTRAL SPECIES 40 ENSGT00940000162676.a.b.b.a.b ENSGT00950000182968.d.a.a.a.d.a.a.b.a.a.b.b.a.b.a ENSGT00940000162676.a.b.a ENSGT00950000182968.d.a.a.a.d.a.b ENSGT00950000182968.d.a.b.b.a.b ENSGT00950000182968.d.a.b.b.a.a ENSGT00950000182968.d.a.a.a.d.a.a.b.a.a.b.a ENSGT00940000163911.a.a.b.a.a.a.b.c ENSGT01030000234563.b.a.a ENSGT00390000005589.a.a ENSGT00940000157318 ENSGT00950000183337 ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438.k ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a NAME_6 ANCESTRAL SPECIES 573 ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 Amazon molly MODERN SPECIES 1058 trmt10a (ENSPFOG00000002833) ENSPFOG00000002796 hacd4 (ENSPFOG00000002728) ##22 Sailfin molly MODERN SPECIES 2756 C4orf54 (ENSPLAG00000011066) hacd4 (ENSPLAG00000011073) ##22 Platyfish MODERN SPECIES 5 ENSXMAG00000021358 ENSXMAG00000029404 ENSXMAG00000021221 ENSXMAG00000024595 ENSXMAG00000028834 ENSXMAG00000024868 ENSXMAG00000011347 ENSXMAG00000011349 ENSXMAG00000028347 SORCS2 (ENSXMAG00000011355) grpel1 (ENSXMAG00000011390) tada2b (ENSXMAG00000025422) ENSXMAG00000025894 trmt10a (ENSXMAG00000022944) ENSXMAG00000026553 hacd4 (ENSXMAG00000002906) ##22 ENSXMAG00000007632 mllt3 (ENSXMAG00000007644) H2AZ1 (ENSXMAG00000007658) ENSXMAG00000007661 ENSXMAG00000025606 ENSXMAG00000007684 rwdd (ENSXMAG00000007705) ENSXMAG00000024461 ing2 (ENSXMAG00000007709) ENSXMAG00000028895 ENSXMAG00000025602 slx1b (ENSXMAG00000007720) zgc:112271 (ENSXMAG00000007722) ENSXMAG00000007724 pygmb (ENSXMAG00000007739) NAME_4 ANCESTRAL SPECIES 268 ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT01030000240214 ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 Mummichog MODERN SPECIES 329 frem1a (ENSFHEG00000003024) ENSFHEG00000002992 TSPAN5 (ENSFHEG00000002978) RAP1GDS1 (ENSFHEG00000002934) slc1a1 (ENSFHEG00000000086) ENSFHEG00000002831 trmt10a (ENSFHEG00000002823) ENSFHEG00000002817 hacd4 (ENSFHEG00000002809) ##22 ENSFHEG00000002787 ENSFHEG00000000794 mllt3 (ENSFHEG00000002695) H2AZ1 (ENSFHEG00000002672) ENSFHEG00000002645 ENSFHEG00000002626 Sheepshead minnow MODERN SPECIES 1393 ENSCVAG00000001489 trmt10a (ENSCVAG00000001488) C4orf54 (ENSCVAG00000001483) hacd4 (ENSCVAG00000000056) ##22 ENSCVAG00000001475 Oryzias ANCESTRAL SPECIES 53 ENSGT00940000163911.a.a.b.a.a.a.b.b ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a.l ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a ENSGT00940000157258 Oryzias_a ANCESTRAL SPECIES 103 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000158194 ENSGT00940000177470 ENSGT00950000182899.C.b ENSGT00390000013368 ENSGT00510000047760 Chinese medaka MODERN SPECIES 1095 RAP1GDS1 (ENSOSIG00000014070) ENSOSIG00000014069 slc1a1 (ENSOSIG00000014068) ENSOSIG00000014067 trmt10a (ENSOSIG00000014065) ENSOSIG00000014062 hacd4 (ENSOSIG00000014061) ##22 ENSOSIG00000014046 ENSOSIG00000014040 ENSOSIG00000014038 ENSOSIG00000014032 Japanese Medaka HdrR MODERN SPECIES 9 ENSORLG00000011839 ENSORLG00000023749 ENSORLG00000028571 sf1 (ENSORLG00000011853) pygmb (ENSORLG00000011893) ENSORLG00000028102 ENSORLG00000024184 tspan5a (ENSORLG00000011921) RAP1GDS1 (ENSORLG00000011995) ENSORLG00000027037 ENSORLG00000028454 ENSORLG00000022029 slc1a1 (ENSORLG00000012050) trmt10a (ENSORLG00000012069) ENSORLG00000023851 hacd4 (ENSORLG00000012074) ##22 ENSORLG00000012145 ENSORLG00000026308 mllt3 (ENSORLG00000012166) H2AZ1 (ENSORLG00000022841) ENSORLG00000012217 ENSORLG00000027828 ENSORLG00000012240 rwdd (ENSORLG00000023239) ing2 (ENSORLG00000012292) ENSORLG00000012282 ENSORLG00000023573 slx1b (ENSORLG00000012306) zgc:112271 (ENSORLG00000025424) ENSORLG00000024474 ENSORLG00000028709 Oryzias_b ANCESTRAL SPECIES 37 ENSGT00950000182850.a.b.a.a ENSGT00390000012556 ENSGT00940000155475.h ENSGT00940000153395.a ENSGT00950000183067.a.a ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00940000172047 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000177470 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00950000183148.b.a.g.a ENSGT00940000157258 Indian medaka MODERN SPECIES 19 ABLIM2 (ENSOMEG00000004271) zcchc4 (ENSOMEG00000004315) pde5ab (ENSOMEG00000004350) mad2l1 (ENSOMEG00000004375) AFAP1 (ENSOMEG00000004442) PAQR9 (ENSOMEG00000004455) ENSOMEG00000004458 frem1a (ENSOMEG00000004492) ENSOMEG00000004502 ENSOMEG00000004522 RAP1GDS1 (ENSOMEG00000004595) slc1a1 (ENSOMEG00000004659) spata6l (ENSOMEG00000004701) trmt10a (ENSOMEG00000004720) ENSOMEG00000004740 hacd4 (ENSOMEG00000004757) ##22 ENSOMEG00000004778 ENSOMEG00000004799 mllt3 (ENSOMEG00000004860) H2AZ1 (ENSOMEG00000004889) ENSOMEG00000004908 ENSOMEG00000004977 rwdd (ENSOMEG00000005015) ENSOMEG00000005031 ing2 (ENSOMEG00000005040) ENSOMEG00000005048 ENSOMEG00000005062 slx1b (ENSOMEG00000005075) ENSOMEG00000005088 ets2 (ENSOMEG00000005134) pygmb (ENSOMEG00000005192) Javanese ricefish MODERN SPECIES 9 TSPAN5 (ENSOJAG00000022700) ENSOJAG00000022714 ENSOJAG00000022745 PAQR9 (ENSOJAG00000022752) AFAP1 (ENSOJAG00000022763) mad2l1 (ENSOJAG00000022783) pde5ab (ENSOJAG00000022845) zcchc4 (ENSOJAG00000022997) ABLIM2 (ENSOJAG00000023009) ARSJ (ENSOJAG00000023050) camk2d1 (ENSOJAG00000023195) ANK2 (ENSOJAG00000023500) ENSOJAG00000023530 trmt10a (ENSOJAG00000023535) ENSOJAG00000023536 hacd4 (ENSOJAG00000023540) ##22 mllt3 (ENSOJAG00000023610) H2AZ1 (ENSOJAG00000023617) ENSOJAG00000023625 ENSOJAG00000023631 rwdd (ENSOJAG00000023638) ing2 (ENSOJAG00000023641) ENSOJAG00000023645 ENSOJAG00000023648 SLX1 (ENSOJAG00000023649) zgc:112271 (ENSOJAG00000023652) ets2 (ENSOJAG00000023653) ENSOJAG00000023659 taf6l (ENSOJAG00000023666) cth1 (ENSOJAG00000023670) mta2 (ENSOJAG00000023748) Ovalentaria_B ANCESTRAL SPECIES 19 ENSGT00940000159769.a.a ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Pomacentridae ANCESTRAL SPECIES 74 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00390000002231.a ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 Pomacentridae_A ANCESTRAL SPECIES 53 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00390000016193 ENSGT01030000234590.B.a.a.e.b Amphiprion ANCESTRAL SPECIES 74 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000006988.bb.a ENSGT00390000015545 ENSGT00940000167021 ENSGT00940000158194 ENSGT00950000182899.C.b ENSGT00600000085600 ENSGT00390000013368 ENSGT00510000047760 ENSGT00940000167160 ENSGT00390000016193 Orange clownfish MODERN SPECIES 15 senp3b (ENSAPEG00000009637) eif4a1a (ENSAPEG00000009660) ENSAPEG00000009718 mpdu1b (ENSAPEG00000009738) ENSAPEG00000009749 ENSAPEG00000009770 ENSAPEG00000009794 cldnd1a (ENSAPEG00000009810) ACY3 (ENSAPEG00000009828) osbp (ENSAPEG00000009887) coro1b (ENSAPEG00000009952) dtx4a (ENSAPEG00000010017) msantd1 (ENSAPEG00000010060) ENSAPEG00000010099 ENSAPEG00000010196 hacd4 (ENSAPEG00000010214) ##22 ENSAPEG00000010231 ENSAPEG00000010351 ENSAPEG00000010364 ENSAPEG00000010373 mllt3 (ENSAPEG00000010400) ENSAPEG00000010419 ENSAPEG00000010431 ENSAPEG00000010455 ENSAPEG00000010486 ENSAPEG00000010509 ENSAPEG00000010523 oard1 (ENSAPEG00000010553) rwdd (ENSAPEG00000010576) ENSAPEG00000010615 ing2 (ENSAPEG00000010625) Bicolor damselfish MODERN SPECIES 1759 hacd4 (ENSSPAG00000011588) ##22 ENSSPAG00000011517 mllt3 (ENSSPAG00000011443) ENSSPAG00000011421 H2AZ1 (ENSSPAG00000011396) Cichlidae ANCESTRAL SPECIES 31 ENSGT00940000155475.h ENSGT00940000153395.a ENSGT00940000159954 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000156309.B.h ENSGT00940000153783.b.a.b ENSGT00940000165992.a.a ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT01040000240444.A.a.b ENSGT00950000182923.B.b ENSGT00990000211448 ENSGT00390000014725.r.a ENSGT00940000156850.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 18 ENSGT00940000155150.a ENSGT00940000155279.C.a.a ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00990000203893 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000156309.B.h ENSGT00940000153783.b.a.b ENSGT00940000165992.a.a ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT01040000240444.A.a.b ENSGT00950000182923.B.b.h ENSGT00390000014725.r.a.e.a ENSGT00940000156850.a.a ENSGT00940000177336 Pseudocrenilabrinae_A ANCESTRAL SPECIES 47 ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00970000193685 ENSGT00940000156309.B.h ENSGT00940000153783.b.a.b ENSGT00940000165992.a.a ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT01040000240444.A.a.b ENSGT00950000182923.B.b.h ENSGT00390000014725.r.a.e.a ENSGT00940000156850.a.a ENSGT00940000177336 ENSGT00940000160621 Haplochromini ANCESTRAL SPECIES 66 ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00940000155903.v ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000156309.B.h ENSGT00940000153783.b.a.b ENSGT00940000165992.a.a ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT01040000240444.A.a.b ENSGT00950000182923.B.b.h ENSGT00390000014725.r.a.e.a ENSGT00940000156850.a.a ENSGT00940000177336 ENSGT00940000160621 ENSGT00970000193372.a.b Haplochromini_A ANCESTRAL SPECIES 71 ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000156309.B.h ENSGT00940000153783.b.a.b ENSGT00940000165992.a.a ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT01040000240444.A.a.b ENSGT00950000182923.B.b.h ENSGT00390000014725.r.a.e.a ENSGT00940000156850.a.a ENSGT00940000177336 ENSGT00940000160621 ENSGT00970000193372.a.b Haplochromini_B ANCESTRAL SPECIES 85 ENSGT00940000157772 ENSGT00940000162334 ENSGT00940000153289.a.a.b ENSGT00940000156990 ENSGT00940000155429.a.a ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063169.a ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438.e ENSGT00900000140979.a.a ENSGT00940000166804 ENSGT00940000156309.B.h ENSGT00940000153783.b.a.b ENSGT00940000165992.a.a ENSGT00940000153916.A.b ENSGT00390000016193 ENSGT01040000240444.A.a.b ENSGT00950000182923.B.b.h ENSGT00390000014725.r.a.e.a ENSGT00940000156850.a.a ENSGT00940000177336 ENSGT00940000160621 ENSGT00970000193372.a.b Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 1106 ENSMZEG00005012874 NAT16 (ENSMZEG00005012858) mtm1 (ENSMZEG00005012820) mtmr1a (ENSMZEG00005012793) ENSMZEG00005012778 ENSMZEG00005012758 ACO1 (ENSMZEG00005012733) PAQR9 (ENSMZEG00005012721) ENSMZEG00005012701 frem1a (ENSMZEG00005012670) tspan5a (ENSMZEG00005012642) RAP1GDS1 (ENSMZEG00005012594) slc1a1 (ENSMZEG00005012557) trmt10a (ENSMZEG00005012538) C4orf54 (ENSMZEG00005012530) hacd4 (ENSMZEG00005012515) ##22 ENSMZEG00005009948 H2AZ1 (ENSMZEG00005009798) ENSMZEG00005009782 senp3b (ENSMZEG00005009750) eif4a1a (ENSMZEG00005009716) sox19b (ENSMZEG00005009705) mpdu1b (ENSMZEG00005009691) MBLAC1 (ENSMZEG00005009681) ENSMZEG00005009669 gal3st4 (ENSMZEG00005009657) trappc14 (ENSMZEG00005009645) ENSMZEG00005009591 ENSMZEG00005009570 ENSMZEG00005009555 serpine1 (ENSMZEG00005009541) Zebra mbuna MODERN SPECIES 454 hacd4 (ENSMZEG00005022009) ##22 FOCAD (ENSMZEG00005021997) ENSMZEG00005021995 Eastern happy MODERN SPECIES 15 sf1 (ENSACLG00000007633) rbm4.1 (ENSACLG00000007722) rbm4.2 (ENSACLG00000007740) ENSACLG00000007744 ENSACLG00000007745 ENSACLG00000007749 ACO1 (ENSACLG00000007755) PAQR9 (ENSACLG00000007773) ENSACLG00000007781 frem1a (ENSACLG00000007808) tspan5a (ENSACLG00000007837) RAP1GDS1 (ENSACLG00000007853) slc1a1 (ENSACLG00000007903) trmt10a (ENSACLG00000007945) C4orf54 (ENSACLG00000007946) hacd4 (ENSACLG00000007952) ##22 ENSACLG00000007967 ENSACLG00000008007 ENSACLG00000008013 ENSACLG00000008017 ENSACLG00000008023 ENSACLG00000008027 ENSACLG00000008031 ENSACLG00000008034 ENSACLG00000008038 ENSACLG00000008040 ENSACLG00000008044 ENSACLG00000008048 ENSACLG00000008050 ENSACLG00000008057 ENSACLG00000008069 P. nyererei MODERN SPECIES 800 ACO1 (ENSPNYG00000009425) PAQR9 (ENSPNYG00000009359) ENSPNYG00000009341 frem1a (ENSPNYG00000009262) tspan5a (ENSPNYG00000009237) RAP1GDS1 (ENSPNYG00000009192) slc1a1 (ENSPNYG00000009145) trmt10a (ENSPNYG00000009101) ENSPNYG00000009093 hacd4 (ENSPNYG00000009080) ##22 ENSPNYG00000009032 Midas cichlid MODERN SPECIES 351 slc1a1 (ENSACIG00000016751) ENSACIG00000016737 trmt10a (ENSACIG00000016686) C4orf54 (ENSACIG00000016676) hacd4 (ENSACIG00000016651) ##22 ENSACIG00000016563 ENSACIG00000016544 ENSACIG00000016539 ENSACIG00000016515 H2AZ1 (ENSACIG00000016496) Tiger tail seahorse MODERN SPECIES 506 ENSHCOG00000012035 agfg2 (ENSHCOG00000012027) acap1 (ENSHCOG00000012023) SLC16A13 (ENSHCOG00000012018) BCL6B (ENSHCOG00000012012) ENSHCOG00000011983 ENSHCOG00000011977 ENSHCOG00000011968 ENSHCOG00000011945 NEURL4 (ENSHCOG00000011926) shbg (ENSHCOG00000011914) ENSHCOG00000011903 POLR2A (ENSHCOG00000011874) capgb (ENSHCOG00000011861) ENSHCOG00000011850 hacd4 (ENSHCOG00000011839) ##22 ENSHCOG00000011818 mllt3 (ENSHCOG00000011714) H2AZ1 (ENSHCOG00000011658) ENSHCOG00000011638 ENSHCOG00000011621 ENSHCOG00000011569 rwdd (ENSHCOG00000011547) ing2 (ENSHCOG00000011528) ENSHCOG00000011518 men1 (ENSHCOG00000011488) map4k2 (ENSHCOG00000011469) ENSHCOG00000011413 rbm4.1 (ENSHCOG00000011403) sf1 (ENSHCOG00000011388) ENSHCOG00000011377 Pinecone sodierfish MODERN SPECIES 9 ENSMMDG00005007997 ufsp1 (ENSMMDG00005008000) ENSMMDG00005008003 epoa (ENSMMDG00005008007) pop7 (ENSMMDG00005008010) URGCP (ENSMMDG00005008014) ENSMMDG00005008015 ENSMMDG00005008019 tspan5a (ENSMMDG00005008023) RAP1GDS1 (ENSMMDG00005008038) slc1a1 (ENSMMDG00005008604) ENSMMDG00005008605 ENSMMDG00005008607 trmt10a (ENSMMDG00005008608) C4orf54 (ENSMMDG00005008610) hacd4 (ENSMMDG00005008613) ##22 ENSMMDG00005008623 mllt3 (ENSMMDG00005008643) H2AZ1 (ENSMMDG00005008655) ENSMMDG00005008692 ENSMMDG00005008697 ENSMMDG00005008709 ENSMMDG00005008824 rwdd (ENSMMDG00005008826) ENSMMDG00005008830 ing2 (ENSMMDG00005008832) ENSMMDG00005008834 si:ch211-212k18.8 (ENSMMDG00005008837) slx1b (ENSMMDG00005008841) zgc:112271 (ENSMMDG00005008842) ENSMMDG00005008845 Cod MODERN SPECIES 8 ENSGMOG00000030156 ENSGMOG00000000915 ENSGMOG00000005480 ENSGMOG00000032873 ENSGMOG00000026866 ENSGMOG00000000968 frem1a (ENSGMOG00000000910) ENSGMOG00000025124 tspan5a (ENSGMOG00000006958) ENSGMOG00000000882 slc1a1 (ENSGMOG00000000866) ENSGMOG00000024515 ENSGMOG00000027054 ENSGMOG00000000852 ENSGMOG00000026945 hacd4 (ENSGMOG00000000843) ##22 ENSGMOG00000000776 mllt3 (ENSGMOG00000022778) ENSGMOG00000022750 ENSGMOG00000009869 ENSGMOG00000014906 acox3 (ENSGMOG00000017847) senp3b (ENSGMOG00000018338) ENSGMOG00000018350 sox19b (ENSGMOG00000034003) mpdu1b (ENSGMOG00000018375) ENSGMOG00000018392 tm4sf21b (ENSGMOG00000018395) gal3st4 (ENSGMOG00000026795) gal3st4 (ENSGMOG00000035918) trappc14 (ENSGMOG00000007816) Protacanthopterygii ANCESTRAL SPECIES 20 ENSGT00950000183137.b.a ENSGT00940000155800.a.b.c ENSGT00390000015958.d ENSGT00940000153289.a.a.b ENSGT00940000157772 ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a ENSGT00940000161376 ENSGT00390000014293.a ENSGT00940000155397.a.b ENSGT00530000063821.b.b ENSGT00530000063169.a ENSGT00940000165285.f ENSGT00730000111645.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00940000156306 ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b ENSGT00940000158006 ENSGT00550000074944 ENSGT00940000158215 ENSGT00390000008250 ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b ENSGT00940000154308.A.b.a.a.b ENSGT00950000182920.b.a.b.a.a ENSGT00390000007252.c Salmoninae ANCESTRAL SPECIES 269 ENSGT00950000183137.b.a.j ENSGT00940000155800.a.b.c ENSGT00390000015958.d ENSGT00940000163471.a.f ENSGT00940000153289.a.a.b.d ENSGT00940000157772.d ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a.a ENSGT00940000161376 ENSGT00390000014293.a.d ENSGT00940000180421 ENSGT00940000155397.a.b.g ENSGT00530000063169.a.q ENSGT00730000111645.a.c ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.g.a ENSGT00900000140979.a.a ENSGT00530000063652.a.a.a ENSGT00940000156306.c ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b.v ENSGT00940000158006.b ENSGT00550000074944.l ENSGT00940000158215.o ENSGT00390000008250.g ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b ENSGT00940000154308.A.b.a.a.b ENSGT00950000182920.b.a.b.a.a.g ENSGT00390000007252.c.e Salmoninae_a ANCESTRAL SPECIES 34 ENSGT00940000160460 ENSGT00950000183137.b.a.j ENSGT00940000155800.a.b.c ENSGT00390000015958.d ENSGT00940000163471.a.f ENSGT00940000153289.a.a.b.d ENSGT00940000157772.d ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a.a ENSGT00390000014293.a.d ENSGT00940000155397.a.b.g ENSGT00990000214324 ENSGT00530000063169.a.q ENSGT00730000111645.a.c ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.g.a ENSGT00530000063652.a.a.a ENSGT00940000156306.c ENSGT00390000008787.a ENSGT00950000182866.D.d.a.c.a.i.b.a.b ENSGT00950000182916.a.b.a.b.u.b ENSGT00940000158006.b ENSGT00550000074944.l ENSGT00940000158215.o ENSGT00390000008250.g ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b ENSGT00940000154308.A.b.a.a.b ENSGT00950000182920.b.a.b.a.a.g ENSGT00390000007252.c.e Salmo ANCESTRAL SPECIES 18 ENSGT00940000155800.a.b.c ENSGT00390000015958.d ENSGT00940000154308.D.c.a.b.a.b.a.b.a.a.a.b ENSGT00940000154308.D.c.a.b.a.a.a.a.a.b.a.a.a.a.a.a.b.b ENSGT00940000154308.D.c.a.b.b.a.a.a.b.a.b ENSGT00940000153289.a.a.b.d ENSGT00940000157772.d ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a.a ENSGT00390000014293.a.d ENSGT00940000155397.a.b.g ENSGT00990000214324 ENSGT00530000063169.a.q ENSGT00730000111645.a.c ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.g.a ENSGT00530000063652.a.a.a ENSGT00940000156306.c ENSGT00390000008787.a ENSGT00950000182866.D.d.a.c.a.i.b.a.b ENSGT00950000182916.a.b.a.b.u.b ENSGT00940000158006.b ENSGT00550000074944.l ENSGT00940000158215.o ENSGT00390000008250.g ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b ENSGT00940000154308.A.b.a.a.b ENSGT00950000182920.b.a.b.a.a.g ENSGT00390000007252.c.e River trout MODERN SPECIES 35 ccdc149a (ENSSTUG00000001799) ENSSTUG00000001763 ENSSTUG00000001748 ENSSTUG00000001729 ENSSTUG00000001697 ENSSTUG00000001695 ACO1 (ENSSTUG00000001546) frem1a (ENSSTUG00000001292) ENSSTUG00000001247 tspan5a (ENSSTUG00000001228) RAP1GDS1 (ENSSTUG00000001109) slc1a1 (ENSSTUG00000000964) ENSSTUG00000000935 trmt10a (ENSSTUG00000000926) C4orf54 (ENSSTUG00000000922) hacd4 (ENSSTUG00000000918) ##22 ENSSTUG00000000738 mllt3 (ENSSTUG00000000674) H2AZ1 (ENSSTUG00000000660) DDIT4L (ENSSTUG00000000652) PPP3CA (ENSSTUG00000000534) BANK1 (ENSSTUG00000000506) nxpe3 (ENSSTUG00000000503) NFIB (ENSSTUG00000048474) zdhhc21 (ENSSTUG00000048446) plaa (ENSSTUG00000048239) ENSSTUG00000048220 DENND4C (ENSSTUG00000048007) haus6 (ENSSTUG00000047949) ENSSTUG00000047944 ENSSTUG00000047936 Atlantic salmon MODERN SPECIES 9 ENSSSAG00000107458 ENSSSAG00000112040 ENSSSAG00000097914 ENSSSAG00000066501 ENSSSAG00000110548 ENSSSAG00000065501 frem1 (ENSSSAG00000065397) ENSSSAG00000116401 ENSSSAG00000065377 tspan5a (ENSSSAG00000065056) ENSSSAG00000064079 slc1a1 (ENSSSAG00000063951) ENSSSAG00000063943 ENSSSAG00000082168 ENSSSAG00000082763 hacd4 (ENSSSAG00000063895) ##22 focad (ENSSSAG00000057702) mllt3 (ENSSSAG00000057529) H2AZ1 (ENSSSAG00000057486) ddit4l (ENSSSAG00000057471) PPP3CA (ENSSSAG00000056867) ENSSSAG00000056830 ENSSSAG00000095391 ENSSSAG00000084865 ENSSSAG00000054032 ENSSSAG00000096600 ENSSSAG00000053975 ENSSSAG00000053876 ENSSSAG00000053848 ENSSSAG00000041291 ENSSSAG00000040980 Oncorhynchus ANCESTRAL SPECIES 31 ENSGT00950000183137.b.a.j.a ENSGT00940000155800.a.b.c ENSGT00390000015958.d ENSGT01100000263495.A.a.b.b.a.a.b.b.b.b.b.b.a.b.a.a.a.b.b.a.b ENSGT00940000154308.D.c.a.b.b.a.a.a.b.a.b ENSGT00940000153289.a.a.b.d ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a.a ENSGT00940000161376 ENSGT00390000014293.a.d ENSGT00940000155397.a.b.g ENSGT00990000214324 ENSGT00530000063169.a.q ENSGT00730000111645.a.c ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903.g.a ENSGT00530000063652.a.a.a ENSGT00940000156306.c ENSGT00390000008787.a ENSGT00950000182866.D.d.a.c.a.i.b.a.b ENSGT00950000182916.a.b.a.b.u.b ENSGT00940000158006.b ENSGT00550000074944.l ENSGT00940000158215.o ENSGT00390000008250.g ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b ENSGT00940000154308.A.b.a.a.b ENSGT00950000182920.b.a.b.a.a.g ENSGT00390000007252.c.e Oncorhynchus_a ANCESTRAL SPECIES 30 ENSGT00950000183137.b.a.j.a ENSGT00940000155800.a.b.c ENSGT00390000015958.d ENSGT01100000263495.A.a.b.b.a.a.b.b.b.b.b.b.a.b.a.a.a.b.b.a.b ENSGT00940000154308.D.c.a.b.b.a.a.a.b.a.b ENSGT00940000153289.a.a.b.d ENSGT00940000156990 ENSGT00990000204039 ENSGT00940000155429.a.a.a ENSGT00940000161376 ENSGT00390000014293.a.d ENSGT00940000155397.a.b.g ENSGT00990000214324 ENSGT00530000063169.a.q ENSGT00730000111645.a.c ENSGT00530000062962.b.b ##22 ENSGT00940000155903.g.a ENSGT00900000140979.a.a.n.b ENSGT00530000063652.a.a.a ENSGT00940000156306.c ENSGT00390000008787.a ENSGT00950000182866.D.d.a.c.a.i.b.a.b ENSGT00950000182916.a.b.a.b.u.b ENSGT00940000158006.b ENSGT00550000074944.l ENSGT00940000158215.o ENSGT00390000008250.g ENSGT01090000260029.a.a.a.a.a.a.b.b.b.b.b ENSGT00940000154308.A.b.a.a.b ENSGT00950000182920.b.a.b.a.a.g ENSGT00390000007252.c.e Coho salmon MODERN SPECIES 7 PPARGC1A (ENSOKIG00005023592) dhx15 (ENSOKIG00005023620) ccdc149a (ENSOKIG00005023735) ENSOKIG00005023779 ENSOKIG00005023813 ENSOKIG00005023822 ENSOKIG00005023830 frem1a (ENSOKIG00005023905) ENSOKIG00005024300 ENSOKIG00005024316 RAP1GDS1 (ENSOKIG00005024358) slc1a1 (ENSOKIG00005024458) ENSOKIG00005024977 trmt10a (ENSOKIG00005024987) C4orf54 (ENSOKIG00005025004) hacd4 (ENSOKIG00005025014) ##22 mllt3 (ENSOKIG00005025061) H2AZ1 (ENSOKIG00005025091) DDIT4L (ENSOKIG00005025212) PPP3CA (ENSOKIG00005025273) BANK1 (ENSOKIG00005025483) NXPE3 (ENSOKIG00005025501) NFIB (ENSOKIG00005025535) ZDHHC21 (ENSOKIG00005025640) PLAA (ENSOKIG00005025707) ENSOKIG00005026700 haus6 (ENSOKIG00005027182) ENSOKIG00005027220 ENSOKIG00005027238 plin2 (ENSOKIG00005027244) ENSOKIG00005027261 Chinook salmon MODERN SPECIES 1 ENSOTSG00005047222 ENSOTSG00005047223 ENSOTSG00005047224 ENSOTSG00005047226 ENSOTSG00005047227 ENSOTSG00005047228 ENSOTSG00005047229 frem1a (ENSOTSG00005047230) ENSOTSG00005047231 tspan5a (ENSOTSG00005047233) RAP1GDS1 (ENSOTSG00005047234) slc1a1 (ENSOTSG00005047237) ENSOTSG00005047253 trmt10a (ENSOTSG00005047255) C4orf54 (ENSOTSG00005047256) hacd4 (ENSOTSG00005047257) ##22 mllt3 (ENSOTSG00005047259) H2AZ1 (ENSOTSG00005000689) DDIT4L (ENSOTSG00005000760) PPP3CA (ENSOTSG00005001494) BANK1 (ENSOTSG00005001506) nxpe3 (ENSOTSG00005001510) ENSOTSG00005001512 zdhhc21 (ENSOTSG00005001513) plaa (ENSOTSG00005001522) DENND4C (ENSOTSG00005001557) haus6 (ENSOTSG00005001767) ENSOTSG00005001793 ENSOTSG00005001798 plin2 (ENSOTSG00005001802) ENSOTSG00005001807 Rainbow trout MODERN SPECIES 30 PPARGC1A (ENSOMYG00000074575) dhx15 (ENSOMYG00000045446) ccdc149a (ENSOMYG00000045481) ENSOMYG00000058832 ENSOMYG00000001522 ENSOMYG00000001575 frem1a (ENSOMYG00000001711) ENSOMYG00000001846 tspan5a (ENSOMYG00000001867) ENSOMYG00000001988 slc1a1 (ENSOMYG00000002082) ENSOMYG00000002116 ENSOMYG00000002125 ENSOMYG00000002143 ENSOMYG00000065315 hacd4 (ENSOMYG00000002160) ##22 ENSOMYG00000002377 mllt3 (ENSOMYG00000002515) H2AZ1 (ENSOMYG00000002472) DDIT4L (ENSOMYG00000002531) ENSOMYG00000054779 PPP3CA (ENSOMYG00000002701) ENSOMYG00000074496 BANK1 (ENSOMYG00000002844) ENSOMYG00000002928 ENSOMYG00000003066 ENSOMYG00000068849 ENSOMYG00000003148 ENSOMYG00000003535 ENSOMYG00000004585 ENSOMYG00000004846 Huchen MODERN SPECIES 1114 ENSHHUG00000005331 slc1a1 (ENSHHUG00000005296) trmt10a (ENSHHUG00000005292) ENSHHUG00000005244 C4orf54 (ENSHHUG00000005233) hacd4 (ENSHHUG00000005228) ##22 ENSHHUG00000005168 eno4 (ENSHHUG00000005157) hspa12a (ENSHHUG00000005109) pitx3 (ENSHHUG00000005081) ENSHHUG00000005077 Northern pike MODERN SPECIES 23 ccdc149a (ENSELUG00000016931) ACER2 (ENSELUG00000016895) ENSELUG00000016841 ACO1 (ENSELUG00000016812) frem1a (ENSELUG00000016724) ENSELUG00000016572 tspan5a (ENSELUG00000016547) RAP1GDS1 (ENSELUG00000016426) slc1a1 (ENSELUG00000016268) spata6l (ENSELUG00000016212) trmt10a (ENSELUG00000016190) ENSELUG00000031565 ENSELUG00000016183 ENSELUG00000016170 C4orf54 (ENSELUG00000016148) HACD4 (ENSELUG00000016126) ##22 ENSELUG00000016097 mllt3 (ENSELUG00000016011) H2AZ1 (ENSELUG00000015934) DDIT4L (ENSELUG00000015919) PPP3CA (ENSELUG00000015889) BANK1 (ENSELUG00000015766) NFIB (ENSELUG00000015696) zdhhc21 (ENSELUG00000015599) plaa (ENSELUG00000015555) DENND4C (ENSELUG00000015503) haus6 (ENSELUG00000001574) ENSELUG00000015450 ENSELUG00000015361 plin2 (ENSELUG00000015381) ENSELUG00000015347 Osteoglossiformes ANCESTRAL SPECIES 103 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT01030000234532.B.e.a ##24 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT00900000140979.a.a ENSGT00530000063652.a.a ENSGT00910000147694 ENSGT00940000156306 ENSGT00390000008787.a ENSGT00950000182916.a.b.a.b ENSGT00940000158006 ENSGT00550000074944 ENSGT00940000158695.a ENSGT00890000139482 ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT00950000183132.C Asian bonytongue MODERN SPECIES 20 SRP72 (ENSSFOG00015002026) arl9 (ENSSFOG00015002018) hopx (ENSSFOG00015026584) SEC24B (ENSSFOG00015001978) TSTD2 (ENSSFOG00015001969) NCBP1 (ENSSFOG00015001872) SLC49A3 (ENSSFOG00015001823) PCGF3 (ENSSFOG00015001785) CPLX1 (ENSSFOG00015026886) ENSSFOG00015025236 ENSSFOG00015024766 gne (ENSSFOG00015001694) clta (ENSSFOG00015031319) rpl34 (ENSSFOG00015001627) SLC24A2 (ENSSFOG00015001558) ##24 hacd4 (ENSSFOG00015030533) ##22 ENSSFOG00015001514 mllt3 (ENSSFOG00015001413) DDIT4L (ENSSFOG00015001392) PPP3CA (ENSSFOG00015001288) BANK1 (ENSSFOG00015001267) NFIB (ENSSFOG00015001197) zdhhc21 (ENSSFOG00015001172) plaa (ENSSFOG00015001104) TMOD1 (ENSSFOG00015001049) tdrd7a (ENSSFOG00015001037) COX18 (ENSSFOG00015001028) igfbp7 (ENSSFOG00015029555) polr2b (ENSSFOG00015000924) noa1 (ENSSFOG00015000914) rest (ENSSFOG00015000910) P. kingsleyae MODERN SPECIES 182 ostc (ENSPKIG00000000697) rpl34 (ENSPKIG00000000673) slc24a2 (ENSPKIG00000000585) ##24 hacd4 (ENSPKIG00000000528) ##22 ENSPKIG00000000409 mllt3 (ENSPKIG00000000298) H2AZ1 (ENSPKIG00000000273) DDIT4L (ENSPKIG00000000268) ENSPKIG00000000260 PPP3CA (ENSPKIG00000000217) BANK1 (ENSPKIG00000000178) NFIB (ENSPKIG00000000142) ENSPKIG00000000118 plaa (ENSPKIG00000000092) TMOD1 (ENSPKIG00000000069) tdrd7a (ENSPKIG00000000052) COX18 (ENSPKIG00000000041) igfbp7 (ENSPKIG00000000031) polr2b (ENSPKIG00000000008) Spotted gar MODERN SPECIES 670 ACO1 (ENSLOCG00000011082) ENSLOCG00000011091 ENSLOCG00000018042 ACER2 (ENSLOCG00000011100) RPS6 (ENSLOCG00000011108) DENND4C (ENSLOCG00000011126) gne (ENSLOCG00000011146) clta (ENSLOCG00000011155) nansa (ENSLOCG00000011173) ENSLOCG00000011181 ENSLOCG00000011189 COL25A1 (ENSLOCG00000011197) etnppl (ENSLOCG00000011208) ostc (ENSLOCG00000011223) rpl34 (ENSLOCG00000011235) hacd4 (ENSLOCG00000011238) ##22 FOCAD (ENSLOCG00000011240) mllt3 (ENSLOCG00000011259) H2AZ1 (ENSLOCG00000011277) DDIT4L (ENSLOCG00000011286) ENSLOCG00000018044 ENSLOCG00000018046 ENSLOCG00000018048 ENSLOCG00000011293 PPP3CA (ENSLOCG00000011303) BANK1 (ENSLOCG00000011321) NFIB (ENSLOCG00000011325) zdhhc21 (ENSLOCG00000011340) plaa (ENSLOCG00000011346) TMOD1 (ENSLOCG00000011358) tdrd7a (ENSLOCG00000011373) Reedfish MODERN SPECIES 15 aqp3a (ENSECRG00000011163) ENSECRG00000011167 ENSECRG00000011172 ube2r2 (ENSECRG00000011181) ENSECRG00000011188 ENSECRG00000011194 ela3l (ENSECRG00000011198) ENSECRG00000011202 mtap (ENSECRG00000011205) TOPORS (ENSECRG00000011212) DMRTA1 (ENSECRG00000011218) ENSECRG00000011232 elavl2 (ENSECRG00000011249) ENSECRG00000011263 CAAP1 (ENSECRG00000011292) hacd4 (ENSECRG00000011333) ##22 FOCAD (ENSECRG00000011383) ENSECRG00000011495 ENSECRG00000011506 H2AZ1 (ENSECRG00000011528) DDIT4L (ENSECRG00000011559) SLC39A8 (ENSECRG00000011574) ENSECRG00000011595 PPP3CA (ENSECRG00000011638) ENSECRG00000011663 rpl34 (ENSECRG00000011673) CXXC4 (ENSECRG00000011685) TET2 (ENSECRG00000011705) ppa2 (ENSECRG00000011746) ARHGEF38 (ENSECRG00000011809) ints12 (ENSECRG00000011834) Sarcopterygii ANCESTRAL SPECIES 461 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 Tetrapoda ANCESTRAL SPECIES 2 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 Amniota ANCESTRAL SPECIES 4 ENSGT00940000156665 ENSGT00390000005644 ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Sauria ANCESTRAL SPECIES 5 ENSGT00390000005644 ENSGT01000000214430.d ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.c ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 Archelosauria ANCESTRAL SPECIES 7 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 Archosauria ANCESTRAL SPECIES 31 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT01030000235336 Aves ANCESTRAL SPECIES 45 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT01030000235336 Neognathae ANCESTRAL SPECIES 12 ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT01030000235336 Neognathae_b ANCESTRAL SPECIES 5 ENSGT00940000156165.k.b ENSGT01050000244942.b.a.a ENSGT00940000154609 ENSGT00940000155221 ENSGT00940000157708 ENSGT00940000158164 ENSGT00390000005323 ENSGT00940000159384 ENSGT00920000149159 ENSGT00940000155770 ENSGT00390000015537.lb.b ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 Neognathae_c ANCESTRAL SPECIES 2 ENSGT00940000156165.k.b ENSGT01050000244942.b.a.a ENSGT00940000154609 ENSGT00940000155221 ENSGT00940000157708 ENSGT00940000158164 ENSGT00390000005323 ENSGT00940000159384 ENSGT00920000149159 ENSGT00940000155770 ENSGT00390000015537.lb.b ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 Kakapo MODERN SPECIES 19 ENSSHBG00005014388 TMC1 (ENSSHBG00005014403) ALDH1A1 (ENSSHBG00005014415) ANXA1 (ENSSHBG00005014425) RORB (ENSSHBG00005014434) TRPM6 (ENSSHBG00005014447) CARNMT1 (ENSSHBG00005014513) NMRK1 (ENSSHBG00005014528) OSTF1 (ENSSHBG00005014548) PCSK5 (ENSSHBG00005014585) ENSSHBG00005014628 PIP5K1B (ENSSHBG00005014641) FXN (ENSSHBG00005014655) TJP2 (ENSSHBG00005015315) ENSSHBG00005020025 HACD4 (ENSSHBG00005020026) ##22 FOCAD (ENSSHBG00005020031) MLLT3 (ENSSHBG00005020033) SLC24A2 (ENSSHBG00005020035) ##24 ACER2 (ENSSHBG00005020040) ENSSHBG00005020043 DENND4C (ENSSHBG00005020049) PLIN2 (ENSSHBG00005020060) HAUS6 (ENSSHBG00005020065) SAXO1 (ENSSHBG00005020075) ENSSHBG00005020078 ENSSHBG00005020084 SH3GL2 (ENSSHBG00005020088) ENSSHBG00005020091 CNTLN (ENSSHBG00005020093) BNC2 (ENSSHBG00005020107) Golden eagle MODERN SPECIES 91 ENSACCG00020016012 ALDH1A1 (ENSACCG00020016020) ENSACCG00020009610 ANXA1 (ENSACCG00020009628) RORB (ENSACCG00020009650) TRPM6 (ENSACCG00020010722) CARNMT1 (ENSACCG00020011293) NMRK1 (ENSACCG00020011311) OSTF1 (ENSACCG00020011328) PCSK5 (ENSACCG00020011352) ENSACCG00020011377 PIP5K1B (ENSACCG00020011401) FXN (ENSACCG00020011414) TJP2 (ENSACCG00020011448) ENSACCG00020011514 HACD4 (ENSACCG00020011540) ##22 FOCAD (ENSACCG00020011610) MLLT3 (ENSACCG00020011695) SLC24A2 (ENSACCG00020011737) ##24 ACER2 (ENSACCG00020011789) ENSACCG00020011813 ENSACCG00020011845 DENND4C (ENSACCG00020011926) PLIN2 (ENSACCG00020012024) HAUS6 (ENSACCG00020012087) SAXO1 (ENSACCG00020012163) ADAMTSL1 (ENSACCG00020012441) ENSACCG00020012754 ENSACCG00020012769 SH3GL2 (ENSACCG00020012786) CNTLN (ENSACCG00020012818) Passeriformes ANCESTRAL SPECIES 7 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT01030000234519.e.a.a.a.a.b ENSGT00940000153241.A ENSGT00390000013287 ENSGT00940000162569.b ENSGT00950000183083.a.d.b ENSGT00940000161970 ENSGT00940000154422 ENSGT00940000161348 ENSGT00390000015537.lb.a ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 ENSGT00390000005708 Great tit MODERN SPECIES 642 TLE4 (ENSPMJG00000018643) PSAT1 (ENSPMJG00000018641) CEP78 (ENSPMJG00000018639) ENSPMJG00000018637 VPS13A (ENSPMJG00000017722) FOXB2 (ENSPMJG00000017720) ENSPMJG00000017719 ENSPMJG00000017716 GCNT1 (ENSPMJG00000017715) RFK (ENSPMJG00000017714) ENSPMJG00000017713 PIP5K1B (ENSPMJG00000017712) FXN (ENSPMJG00000017711) TJP2 (ENSPMJG00000017709) ENSPMJG00000017708 HACD4 (ENSPMJG00000017707) ##22 FOCAD (ENSPMJG00000017706) MLLT3 (ENSPMJG00000017704) SLC24A2 (ENSPMJG00000017702) ##24 ACER2 (ENSPMJG00000017701) ENSPMJG00000017700 DENND4C (ENSPMJG00000017699) PLIN2 (ENSPMJG00000017698) HAUS6 (ENSPMJG00000017696) ENSPMJG00000017695 ADAMTSL1 (ENSPMJG00000017694) SH3GL2 (ENSPMJG00000017693) ENSPMJG00000017688 BNC2 (ENSPMJG00000017687) CCDC171 (ENSPMJG00000017668) PSIP1 (ENSPMJG00000017666) Passeriformes_d ANCESTRAL SPECIES 6 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT01030000234519.e.a.a.a.a.b ENSGT00940000153241.A ENSGT00390000013287 ENSGT00940000162569.b.e.a ENSGT00950000183083.a.d.b ENSGT00940000161970 ENSGT00940000154422 ENSGT00940000161348 ENSGT00390000015537.lb.a ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 ENSGT00390000005708 Passeriformes_g ANCESTRAL SPECIES 7 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT01030000234519.e.a.a.a.a.b ENSGT00940000153241.A ENSGT00390000013287 ENSGT00940000162569.b.e.a ENSGT00950000183083.a.d.b ENSGT00940000161970 ENSGT00940000154422 ENSGT00940000161348 ENSGT00390000015537.lb.a ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 ENSGT00390000005708 Passeroidea ANCESTRAL SPECIES 23 ENSGT00940000159488 ENSGT01030000234519.e.a.a.a.a.a ENSGT01030000234519.e.a.a.a.a.b ENSGT00940000153241.A ENSGT00390000013287 ENSGT00940000162569.b.e.a ENSGT00950000183083.a.d.b ENSGT00940000161970 ENSGT00940000154422 ENSGT00940000161348 ENSGT00390000015537.lb.a ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 ENSGT00390000005708 Common canary MODERN SPECIES 25 VPS13A (ENSSCAG00000001181) ENSSCAG00000001220 ENSSCAG00000001254 GCNT1 (ENSSCAG00000001263) RFK (ENSSCAG00000001272) ENSSCAG00000001290 PIP5K1B (ENSSCAG00000001324) FXN (ENSSCAG00000001335) TJP2 (ENSSCAG00000001351) ENSSCAG00000001371 HACD4 (ENSSCAG00000001375) ##22 FOCAD (ENSSCAG00000001393) MLLT3 (ENSSCAG00000001419) SLC24A2 (ENSSCAG00000001432) ##24 ACER2 (ENSSCAG00000001442) ENSSCAG00000001449 DENND4C (ENSSCAG00000001467) PLIN2 (ENSSCAG00000001499) HAUS6 (ENSSCAG00000001512) ADAMTSL1 (ENSSCAG00000001544) SH3GL2 (ENSSCAG00000001580) BNC2 (ENSSCAG00000001590) CCDC171 (ENSSCAG00000001614) PSIP1 (ENSSCAG00000001649) SNAPC3 (ENSSCAG00000001672) TTC39B (ENSSCAG00000001680) Zebra finch MODERN SPECIES 104 PIP5K1B (ENSTGUG00000004178) FXN (ENSTGUG00000019340) TJP2 (ENSTGUG00000004208) ENSTGUG00000004245 HACD4 (ENSTGUG00000004248) ##22 FOCAD (ENSTGUG00000004262) MLLT3 (ENSTGUG00000004299) SLC24A2 (ENSTGUG00000004321) ##24 ACER2 (ENSTGUG00000019762) ENSTGUG00000004334 DENND4C (ENSTGUG00000004350) PLIN2 (ENSTGUG00000004399) HAUS6 (ENSTGUG00000026672) ADAMTSL1 (ENSTGUG00000004435) SH3GL2 (ENSTGUG00000004460) ENSTGUG00000025732 BNC2 (ENSTGUG00000004482) ENSTGUG00000004492 PSIP1 (ENSTGUG00000004519) SNAPC3 (ENSTGUG00000004548) Medium ground finch MODERN SPECIES 26 TLE4 (ENSGFOG00000007432) PSAT1 (ENSGFOG00000007440) CEP78 (ENSGFOG00000007453) ENSGFOG00000007499 VPS13A (ENSGFOG00000007562) ENSGFOG00000008216 ENSGFOG00000008222 GCNT1 (ENSGFOG00000008229) RFK (ENSGFOG00000008233) ENSGFOG00000008240 PIP5K1B (ENSGFOG00000008263) ENSGFOG00000008273 FXN (ENSGFOG00000008279) TJP2 (ENSGFOG00000008285) ENSGFOG00000008306 HACD4 (ENSGFOG00000008308) ##22 FOCAD (ENSGFOG00000008324) MLLT3 (ENSGFOG00000008367) SLC24A2 (ENSGFOG00000008377) ##24 ACER2 (ENSGFOG00000008388) ENSGFOG00000008393 DENND4C (ENSGFOG00000008426) PLIN2 (ENSGFOG00000008562) HAUS6 (ENSGFOG00000008571) ADAMTSL1 (ENSGFOG00000008592) SH3GL2 (ENSGFOG00000008649) ENSGFOG00000008670 BNC2 (ENSGFOG00000008686) ENSGFOG00000008696 ENSGFOG00000008702 ENSGFOG00000008704 Flycatcher MODERN SPECIES 561 NAA35 (ENSFALG00000003574) AGTPBP1 (ENSFALG00000003605) ENSFALG00000003611 PSAT1 (ENSFALG00000003335) CEP78 (ENSFALG00000003321) ENSFALG00000003294 VPS13A (ENSFALG00000003265) FOXB2 (ENSFALG00000003253) PRUNE2 (ENSFALG00000028604) GCNT1 (ENSFALG00000014568) RFK (ENSFALG00000027122) ENSFALG00000003199 ENSFALG00000003176 ENSFALG00000003147 ENSFALG00000003139 HACD4 (ENSFALG00000025434) ##22 FOCAD (ENSFALG00000003119) MLLT3 (ENSFALG00000003101) SLC24A2 (ENSFALG00000003088) ##24 ACER2 (ENSFALG00000022880) ENSFALG00000003078 DENND4C (ENSFALG00000003075) PLIN2 (ENSFALG00000003066) ADAMTSL1 (ENSFALG00000003055) ENSFALG00000003049 BNC2 (ENSFALG00000003044) KDM4C (ENSFALG00000010643) GLDC (ENSFALG00000010628) UHRF2 (ENSFALG00000010614) KIAA2026 (ENSFALG00000010612) MLANA (ENSFALG00000028522) Galloanserae ANCESTRAL SPECIES 11 ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT00390000007924 Anatidae ANCESTRAL SPECIES 12 ENSGT00390000017130 ENSGT00940000156165.k.b ENSGT01050000244942.b.a.a ENSGT00940000154609 ENSGT00940000155221 ENSGT00940000157708 ENSGT00940000158164 ENSGT00390000005323 ENSGT00920000149159 ENSGT00940000155770 ENSGT00390000015537 ENSGT00940000156639 ENSGT00390000005811 ENSGT00940000158634 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Duck MODERN SPECIES 4281 ZFAND5 (ENSAPLG00000004423) ENSAPLG00000027579 ALDH1A1 (ENSAPLG00000004796) ANXA1 (ENSAPLG00000007359) RORB (ENSAPLG00000007187) TRPM6 (ENSAPLG00000014165) CARNMT1 (ENSAPLG00000014643) OSTF1 (ENSAPLG00000022909) PCSK5 (ENSAPLG00000014928) ENSAPLG00000016157 ENSAPLG00000029916 PIP5K1B (ENSAPLG00000016263) FXN (ENSAPLG00000025427) TJP2 (ENSAPLG00000002087) ENSAPLG00000003430 HACD4 (ENSAPLG00000003531) ##22 FOCAD (ENSAPLG00000003581) MLLT3 (ENSAPLG00000004429) SLC24A2 (ENSAPLG00000020062) ##24 ACER2 (ENSAPLG00000004885) DENND4C (ENSAPLG00000005223) RPS6 (ENSAPLG00000004889) PLIN2 (ENSAPLG00000005745) HAUS6 (ENSAPLG00000006057) SAXO1 (ENSAPLG00000006403) ENSAPLG00000006493 ENSAPLG00000025052 ENSAPLG00000006616 SH3GL2 (ENSAPLG00000007190) CNTLN (ENSAPLG00000007696) ENSAPLG00000020249 Pink-footed goose MODERN SPECIES 166 RORB (ENSABRG00000016287) TRPM6 (ENSABRG00000016397) CARNMT1 (ENSABRG00000016855) OSTF1 (ENSABRG00000016866) PCSK5 (ENSABRG00000016875) ENSABRG00000016887 PIP5K1B (ENSABRG00000016890) FXN (ENSABRG00000016901) ENSABRG00000016903 ENSABRG00000016912 HACD4 (ENSABRG00000016929) ##22 FOCAD (ENSABRG00000017047) MLLT3 (ENSABRG00000017613) SLC24A2 (ENSABRG00000017632) ##24 ACER2 (ENSABRG00000017637) ENSABRG00000017640 DENND4C (ENSABRG00000017651) Phasianidae ANCESTRAL SPECIES 5 ENSGT00940000153636.b ENSGT00940000157366 ENSGT00940000160905 ENSGT00550000074816.B ENSGT01100000263829 ENSGT00940000156117 ENSGT00390000017892 ENSGT00940000156820.a.a ENSGT00530000063335.B.a.b ENSGT00940000158634 ENSGT00390000005811 ENSGT00940000156639 ENSGT00390000015537.rb.b ENSGT00940000155225.b.b ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT00390000007924 Japanese quail MODERN SPECIES 699 TRPM3 (ENSCJPG00005007756) KLF9 (ENSCJPG00005007737) ENSCJPG00005007735 MAMDC2 (ENSCJPG00005007732) PTAR1 (ENSCJPG00005007729) APBA1 (ENSCJPG00005007725) ENTREP1 (ENSCJPG00005007724) ENSCJPG00005007723 ENSCJPG00005007722 ENSCJPG00005007721 FXN (ENSCJPG00005007720) PIP5K1B (ENSCJPG00005007719) ENSCJPG00005007712 ENSCJPG00005007710 ENSCJPG00005007708 HACD4 (ENSCJPG00005007707) ##22 FOCAD (ENSCJPG00005007688) MLLT3 (ENSCJPG00005007680) SLC24A2 (ENSCJPG00005007673) ##24 ACER2 (ENSCJPG00005007671) ENSCJPG00005007668 DENND4C (ENSCJPG00005007667) PLIN2 (ENSCJPG00005007666) HAUS6 (ENSCJPG00005007664) SAXO1 (ENSCJPG00005007663) ADAMTSL1 (ENSCJPG00005007653) SH3GL2 (ENSCJPG00005007638) CNTLN (ENSCJPG00005007635) BNC2 (ENSCJPG00005007620) ENSCJPG00005007601 ZDHHC21 (ENSCJPG00005007576) Phasianidae_b ANCESTRAL SPECIES 5 ENSGT00940000157611 ENSGT00940000153636.b ENSGT00940000157366 ENSGT00940000160905 ENSGT00550000074816.B ENSGT01100000263829 ENSGT00940000156117 ENSGT00390000017892 ENSGT00940000156820.a.a ENSGT00530000063335.B.a.b ENSGT00940000158634 ENSGT00390000005811 ENSGT00940000156639 ENSGT00940000155225.b.b ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT00390000007924 Chicken MODERN SPECIES 131 TRPM3 (ENSGALG00010016618) KLF9 (ENSGALG00010014987) SMC5 (ENSGALG00010014971) MAMDC2 (ENSGALG00010014934) PTAR1 (ENSGALG00010014914) APBA1 (ENSGALG00010014837) ENTREP1 (ENSGALG00010014810) TJP2 (ENSGALG00010016887) FXN (ENSGALG00010014758) PIP5K1B (ENSGALG00010015797) RFKL (ENSGALG00010015674) ENSGALG00010015650 ENSGALG00010015642 ENSGALG00010015634 ENSGALG00010014231 HACD4 (ENSGALG00010014190) ##22 FOCAD (ENSGALG00010014153) MLLT3 (ENSGALG00010013967) SLC24A2 (ENSGALG00010016336) ##24 ACER2 (ENSGALG00010016314) RPS6 (ENSGALG00010016308) DENND4C (ENSGALG00010016305) PLIN2 (ENSGALG00010016168) HAUS6 (ENSGALG00010016114) ENSGALG00010016080 SAXO1 (ENSGALG00010016073) ADAMTSL1 (ENSGALG00010016043) SH3GL2 (ENSGALG00010014197) CNTLN (ENSGALG00010016566) BNC2 (ENSGALG00010016535) ENSGALG00010014439 Turkey MODERN SPECIES 1299 ABHD17B (ENSMGAG00000005848) ENSMGAG00000017553 ZFAND5 (ENSMGAG00000005890) TRPM3 (ENSMGAG00000005800) ENSMGAG00000022641 SMC5 (ENSMGAG00000005778) APBA1 (ENSMGAG00000005770) PTAR1 (ENSMGAG00000021122) MAMDC2 (ENSMGAG00000005810) ENTREP1 (ENSMGAG00000008761) ENSMGAG00000005756 FXN (ENSMGAG00000018136) ENSMGAG00000005733 ENSMGAG00000019192 ENSMGAG00000013863 HACD4 (ENSMGAG00000019814) ##22 ENSMGAG00000021791 ENSMGAG00000020550 SLC24A2 (ENSMGAG00000005672) ##24 ACER2 (ENSMGAG00000022816) ENSMGAG00000005604 DENND4C (ENSMGAG00000005660) PLIN2 (ENSMGAG00000005633) HAUS6 (ENSMGAG00000020188) SAXO1 (ENSMGAG00000005655) ADAMTSL1 (ENSMGAG00000016070) ENSMGAG00000020884 ENSMGAG00000008992 BNC2 (ENSMGAG00000021479) ENSMGAG00000022161 CCDC171 (ENSMGAG00000020518) African ostrich MODERN SPECIES 687 MTAP (ENSSCUG00000009112) ENSSCUG00000009105 HACD4 (ENSSCUG00000009101) ##22 FOCAD (ENSSCUG00000009089) ENSSCUG00000009077 ENSSCUG00000009070 ##24 ACER2 (ENSSCUG00000009067) ENSSCUG00000009064 DENND4C (ENSSCUG00000009048) PLIN2 (ENSSCUG00000009009) HAUS6 (ENSSCUG00000009005) SAXO1 (ENSSCUG00000009004) ADAMTSL1 (ENSSCUG00000009000) Australian saltwater crocodile MODERN SPECIES 67 LVRN (ENSCPRG00005015523) AP3S1 (ENSCPRG00005015530) ATG12 (ENSCPRG00005015533) CDO1 (ENSCPRG00005015535) TMED7 (ENSCPRG00005015538) ENSCPRG00005015541 FEM1C (ENSCPRG00005015542) CCDC112 (ENSCPRG00005015544) PGGT1B (ENSCPRG00005015545) TRIM36 (ENSCPRG00005015549) CDKN2B (ENSCPRG00005015556) ENSCPRG00005015559 ENSCPRG00005015560 MTAP (ENSCPRG00005015561) ENSCPRG00005015564 HACD4 (ENSCPRG00005015566) ##22 FOCAD (ENSCPRG00005000175) MLLT3 (ENSCPRG00005000317) ENSCPRG00005000342 SLC24A2 (ENSCPRG00005000396) ##24 ACER2 (ENSCPRG00005000407) ENSCPRG00005000421 DENND4C (ENSCPRG00005000460) PLIN2 (ENSCPRG00005000506) HAUS6 (ENSCPRG00005000520) SAXO1 (ENSCPRG00005000531) ADAMTSL1 (ENSCPRG00005000579) SH3GL2 (ENSCPRG00005000664) CNTLN (ENSCPRG00005000737) BNC2 (ENSCPRG00005000801) CCDC171 (ENSCPRG00005000836) Cryptodira ANCESTRAL SPECIES 63 ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Testudinoidea ANCESTRAL SPECIES 7 ENSGT00940000161348 ENSGT00940000154422 ENSGT00940000161970 ENSGT00950000183083.a.d.b ENSGT00940000158510 ENSGT00940000162569.b ENSGT00390000013287 ENSGT00940000153241.A ENSGT01030000234519.e.a.a.a.a.b ENSGT01030000234519.e.a.a.a.a.a ENSGT00940000159488 ENSGT01000000214430.c.b.a.b.a.b ENSGT01000000214430.c.b.b.b.b.b ENSGT01000000214430.c.a.a.a.a ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Emydidae ANCESTRAL SPECIES 20 ENSGT00940000161348 ENSGT00940000154422 ENSGT00940000161970 ENSGT00950000183083.a.d.b ENSGT00940000158510 ENSGT00940000161347 ENSGT00390000013287 ENSGT00940000153241.A ENSGT01030000234519.e.a.a.a.a.b ENSGT01030000234519.e.a.a.a.a.a ENSGT00940000159488 ENSGT01000000214430.c.b.a.b.a.b.d ENSGT01000000214430.c.b.b.b.b.b ENSGT01000000214430.c.a.a.a.a ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 painted turtle MODERN SPECIES 705 ENSCPBG00000019108 CEP78 (ENSCPBG00000019104) PSAT1 (ENSCPBG00000019096) TLE4 (ENSCPBG00000019087) TLE1 (ENSCPBG00000019082) RASEF (ENSCPBG00000019037) ENSCPBG00000019035 ENSCPBG00000019034 ENSCPBG00000019030 ENSCPBG00000019028 ENSCPBG00000019027 ENSCPBG00000019024 ENSCPBG00000019023 ENSCPBG00000019022 ENSCPBG00000019021 HACD4 (ENSCPBG00000019016) ##22 FOCAD (ENSCPBG00000018996) MLLT3 (ENSCPBG00000018979) SLC24A2 (ENSCPBG00000018965) ##24 ACER2 (ENSCPBG00000018962) ENSCPBG00000018961 ENSCPBG00000018959 DENND4C (ENSCPBG00000018955) PLIN2 (ENSCPBG00000018949) HAUS6 (ENSCPBG00000018939) ADAMTSL1 (ENSCPBG00000018927) ENSCPBG00000018923 ENSCPBG00000018920 Three-toed box turtle MODERN SPECIES 50 GCNT1 (ENSTMTG00000020794) PRUNE2 (ENSTMTG00000020608) FOXB2 (ENSTMTG00000020568) VPS13A (ENSTMTG00000020491) GNA14 (ENSTMTG00000020468) GNAQ (ENSTMTG00000020463) CEP78 (ENSTMTG00000020456) ENSTMTG00000020447 PSAT1 (ENSTMTG00000020439) ENSTMTG00000020432 ENSTMTG00000020413 TLE1 (ENSTMTG00000020394) RASEF (ENSTMTG00000020204) ENSTMTG00000020174 ENSTMTG00000020167 HACD4 (ENSTMTG00000020159) ##22 FOCAD (ENSTMTG00000017986) ENSTMTG00000017737 MLLT3 (ENSTMTG00000017725) ENSTMTG00000017693 SLC24A2 (ENSTMTG00000017671) ##24 ACER2 (ENSTMTG00000017654) ENSTMTG00000017639 DENND4C (ENSTMTG00000017478) PLIN2 (ENSTMTG00000017440) HAUS6 (ENSTMTG00000017410) SAXO1 (ENSTMTG00000017388) ENSTMTG00000017369 ENSTMTG00000017350 ENSTMTG00000017328 ENSTMTG00000017184 Testudinidae ANCESTRAL SPECIES 15 ENSGT00940000161348 ENSGT00940000154422 ENSGT00940000161970 ENSGT00950000183083.a.d.b ENSGT00940000158510 ENSGT00940000162569.b ENSGT00390000013287 ENSGT00940000153241.A ENSGT01030000234519.e.a.a.a.a.b ENSGT01030000234519.e.a.a.a.a.a ENSGT00940000159488 ENSGT01000000214430.c.b.a.b.a.b ENSGT01000000214430.c.b.b.b.b.b ENSGT01000000214430.c.a.a.a.a ENSGT01000000214430.c.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT01000000214430.c.b.a.a.a.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Abingdon island giant tortoise MODERN SPECIES 2006 GNG4 (ENSCABG00000015638) ENSCABG00000015646 ENSCABG00000015649 ENSCABG00000015654 ENSCABG00000015656 HACD4 (ENSCABG00000015661) ##22 FOCAD (ENSCABG00000015684) ENSCABG00000016183 ENSCABG00000016184 ENSCABG00000016185 SLC24A2 (ENSCABG00000016186) ##24 ENSCABG00000016187 ACER2 (ENSCABG00000016188) ENSCABG00000016190 ENSCABG00000016191 DENND4C (ENSCABG00000016192) PLIN2 (ENSCABG00000016193) HAUS6 (ENSCABG00000016194) SAXO1 (ENSCABG00000016196) ADAMTSL1 (ENSCABG00000016198) ENSCABG00000016201 Goode s thornscrub tortoise MODERN SPECIES 20 PSAT1 (ENSGEVG00005020848) ENSGEVG00005020845 ENSGEVG00005020844 TLE4 (ENSGEVG00005020789) ENSGEVG00005020771 TLE1 (ENSGEVG00005020765) RASEF (ENSGEVG00005020748) ENSGEVG00005020731 ENSGEVG00005020726 ENSGEVG00005020725 ENSGEVG00005020720 ENSGEVG00005020719 ENSGEVG00005020713 ENSGEVG00005020712 ENSGEVG00005020710 HACD4 (ENSGEVG00005020706) ##22 FOCAD (ENSGEVG00005020652) ENSGEVG00005020631 ENSGEVG00005020628 ENSGEVG00005020624 SLC24A2 (ENSGEVG00005020618) ##24 ENSGEVG00005020615 ENSGEVG00005020612 ACER2 (ENSGEVG00005020609) ENSGEVG00005020605 DENND4C (ENSGEVG00005020568) PLIN2 (ENSGEVG00005020553) HAUS6 (ENSGEVG00005020541) SAXO1 (ENSGEVG00005020536) ENSGEVG00005020522 ENSGEVG00005020514 Chinese turtle MODERN SPECIES 1598 ENSPSIG00000001024 ENSPSIG00000018212 HACD4 (ENSPSIG00000018226) ##22 FOCAD (ENSPSIG00000018232) MLLT3 (ENSPSIG00000007987) SLC24A2 (ENSPSIG00000007999) ##24 ACER2 (ENSPSIG00000008125) ENSPSIG00000008147 DENND4C (ENSPSIG00000008765) PLIN2 (ENSPSIG00000009218) HAUS6 (ENSPSIG00000009630) SAXO1 (ENSPSIG00000009996) ADAMTSL1 (ENSPSIG00000009998) SH3GL2 (ENSPSIG00000011372) ENSPSIG00000011671 Lepidosauria ANCESTRAL SPECIES 1 ENSGT00390000005644 ENSGT01000000214430.d ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.c ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 Episquamata ANCESTRAL SPECIES 6 ENSGT01000000214430.d.a ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000163078 ENSGT00940000162423 ENSGT00950000182991.B ENSGT01000000214430.c ENSGT00990000211106 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT00390000007924 Laterata ANCESTRAL SPECIES 7 ENSGT01000000214430.d.a ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.c ENSGT00990000211106 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000154706 Common wall lizard MODERN SPECIES 8 SMARCA2 (ENSPMRG00000021519) DMRT2 (ENSPMRG00000021499) DMRT3 (ENSPMRG00000021491) DMRT1 (ENSPMRG00000021487) KANK1 (ENSPMRG00000021475) CDKN2B (ENSPMRG00000021467) CDKN2A (ENSPMRG00000021465) MTAP (ENSPMRG00000021457) ENSPMRG00000021447 ENSPMRG00000021439 ENSPMRG00000021432 ENSPMRG00000021428 ENSPMRG00000021420 ENSPMRG00000021401 ENSPMRG00000021394 HACD4 (ENSPMRG00000021384) ##22 FOCAD (ENSPMRG00000021060) MLLT3 (ENSPMRG00000020993) ENSPMRG00000020990 SLC24A2 (ENSPMRG00000020979) ##24 ACER2 (ENSPMRG00000020973) ENSPMRG00000020962 DENND4C (ENSPMRG00000020947) PLIN2 (ENSPMRG00000020937) ENSPMRG00000020930 HAUS6 (ENSPMRG00000020914) SAXO1 (ENSPMRG00000020903) ADAMTSL1 (ENSPMRG00000020846) ENSPMRG00000022220 ENSPMRG00000022213 CNTLN (ENSPMRG00000022132) Argentine black and white tegu MODERN SPECIES 55 ENSSMRG00000006299 ENSSMRG00000006309 ENSSMRG00000006318 HACD4 (ENSSMRG00000006329) ##22 FOCAD (ENSSMRG00000006408) MLLT3 (ENSSMRG00000006460) SLC24A2 (ENSSMRG00000006485) ##24 ACER2 (ENSSMRG00000006492) ENSSMRG00000006495 DENND4C (ENSSMRG00000006507) UHRF2 (ENSSMRG00000006533) GLDC (ENSSMRG00000006545) ENSSMRG00000006563 KDM4C (ENSSMRG00000006595) PTPRD (ENSSMRG00000006679) ENSSMRG00000006709 TYRP1 (ENSSMRG00000006715) LURAP1L (ENSSMRG00000006726) MPDZ (ENSSMRG00000006736) Toxicofera ANCESTRAL SPECIES 6 ENSGT00390000005644 ENSGT01000000214430.d.a ENSGT01050000244898.a.a.a.b ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000163078 ENSGT00940000162423 ENSGT00950000182991.B ENSGT01000000214430.c ENSGT00990000211106 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 ENSGT00390000007924 Elapidae ANCESTRAL SPECIES 7 ENSGT00390000014547 ENSGT00940000158840.c ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000163078 ENSGT00940000162423 ENSGT00950000182991.B ENSGT01000000214430.c.g.b ENSGT01000000214430.c.h.a.a ENSGT00990000211106 ENSGT01000000214430.d.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243.k ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b.c ENSGT01060000248998 ENSGT00390000007924 Elapidae_a ANCESTRAL SPECIES 121 ENSGT01000000214430.c.h.a.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215.g.a ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243.k ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b.c ENSGT00390000007924 ENSGT00940000154706 Acanthophiinae ANCESTRAL SPECIES 118 ENSGT01000000214430.c.h.a.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215.g.a ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00940000156243.k ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b.c ENSGT00390000007924 ENSGT00940000154706 Eastern brown snake MODERN SPECIES 105 ENSPTXG00000017230 HACD4 (ENSPTXG00000017228) ##22 FOCAD (ENSPTXG00000015839) MLLT3 (ENSPTXG00000015801) SLC24A2 (ENSPTXG00000015792) ##24 ACER2 (ENSPTXG00000015791) ENSPTXG00000015790 DENND4C (ENSPTXG00000015784) PLIN2 (ENSPTXG00000015781) HAUS6 (ENSPTXG00000015778) SAXO1 (ENSPTXG00000015764) ENSPTXG00000015756 ENSPTXG00000015755 ENSPTXG00000015747 CNTLN (ENSPTXG00000015746) BNC2 (ENSPTXG00000015745) CCDC171 (ENSPTXG00000015744) Mainland tiger snake MODERN SPECIES 129 ENSNSUG00000011541 HACD4 (ENSNSUG00000011540) ##22 FOCAD (ENSNSUG00000011537) ENSNSUG00000011536 ENSNSUG00000011532 ENSNSUG00000011530 ENSNSUG00000011528 SLC24A2 (ENSNSUG00000011521) ##24 ACER2 (ENSNSUG00000011520) ENSNSUG00000011495 ENSNSUG00000011489 ENSNSUG00000011486 PLIN2 (ENSNSUG00000011483) ENSNSUG00000011481 SAXO1 (ENSNSUG00000011476) ENSNSUG00000011470 ENSNSUG00000011466 Blue-lipped sea krait MODERN SPECIES 6071 HACD4 (ENSLLTG00000009870) ##22 Indian cobra MODERN SPECIES 1 MTAP (ENSNNAG00000013279) ENSNNAG00000013303 ENSNNAG00000013319 ENSNNAG00000013344 ENSNNAG00000013368 ENSNNAG00000007198 ENSNNAG00000007342 ENSNNAG00000007356 ENSNNAG00000007373 ENSNNAG00000007387 ENSNNAG00000007397 ENSNNAG00000007412 ENSNNAG00000007428 ENSNNAG00000007437 ENSNNAG00000007453 HACD4 (ENSNNAG00000007473) ##22 FOCAD (ENSNNAG00000007710) ENSNNAG00000009933 ENSNNAG00000009954 ENSNNAG00000009987 ENSNNAG00000010011 SLC24A2 (ENSNNAG00000010044) ##24 ACER2 (ENSNNAG00000010168) ENSNNAG00000010218 DENND4C (ENSNNAG00000010308) PLIN2 (ENSNNAG00000010835) HAUS6 (ENSNNAG00000010895) SAXO1 (ENSNNAG00000011242) ENSNNAG00000011280 ENSNNAG00000011353 ENSNNAG00000011422 Lizard MODERN SPECIES 1 ENSACAG00000043694 ELAVL2 (ENSACAG00000017521) ENSACAG00000043252 DMRTA1 (ENSACAG00000017537) ENSACAG00000017544 MTAP (ENSACAG00000017549) ENSACAG00000027003 ENSACAG00000024853 ENSACAG00000017572 ENSACAG00000025902 ENSACAG00000017580 ENSACAG00000042281 ENSACAG00000043191 ENSACAG00000026778 ENSACAG00000037340 HACD4 (ENSACAG00000028887) ##22 FOCAD (ENSACAG00000017585) MLLT3 (ENSACAG00000017614) SLC24A2 (ENSACAG00000017625) ##24 ACER2 (ENSACAG00000017629) ENSACAG00000017634 DENND4C (ENSACAG00000017643) ENSACAG00000044236 PLIN2 (ENSACAG00000017672) ENSACAG00000017699 ENSACAG00000043214 ENSACAG00000041325 ENSACAG00000035607 LINGO2 (ENSACAG00000010691) ENSACAG00000036679 ENSACAG00000038569 tuatara MODERN SPECIES 343 HACD4 (ENSSPUG00000018026) ##22 FOCAD (ENSSPUG00000017993) ENSSPUG00000017977 ENSSPUG00000017971 SLC24A2 (ENSSPUG00000017966) ##24 ACER2 (ENSSPUG00000017959) ENSSPUG00000017955 DENND4C (ENSSPUG00000017935) PLIN2 (ENSSPUG00000017923) ENSSPUG00000017918 ENSSPUG00000017908 ENSSPUG00000017894 SAXO1 (ENSSPUG00000017885) ENSSPUG00000017874 ENSSPUG00000017867 ENSSPUG00000017851 Mammalia ANCESTRAL SPECIES 24 ENSGT01050000244898.a.a.a.b ENSGT00940000165347 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Theria ANCESTRAL SPECIES 30 ENSGT00940000165347 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00390000007252.c ENSGT00950000185213 ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Marsupialia ANCESTRAL SPECIES 6 ENSGT00940000165347 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423.a ENSGT00940000165099 ENSGT00950000182991.B ENSGT01000000214430.a.a.a.c.a.a ENSGT01000000214430.a.a.a.c.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00940000155007 ENSGT00940000153558.b ENSGT00940000156806 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000157888 ENSGT00940000158331 ENSGT00390000011081 ENSGT00950000182907.a.b.b.a ENSGT00390000004522 ENSGT00940000154420.A ENSGT00390000004643 Opossum MODERN SPECIES 5 ENSMODG00000047560 ELAVL2 (ENSMODG00000003936) ENSMODG00000003880 DMRTA1 (ENSMODG00000003829) CDKN2B (ENSMODG00000040122) CDKN2A (ENSMODG00000003820) MTAP (ENSMODG00000003781) ifn2 (ENSMODG00000042457) ENSMODG00000042661 ENSMODG00000003707 ENSMODG00000045309 ifn4 (ENSMODG00000049005) ifn7 (ENSMODG00000038103) ENSMODG00000003667 ifn1 (ENSMODG00000025165) HACD4 (ENSMODG00000003655) ##22 FOCAD (ENSMODG00000003634) ENSMODG00000038835 ENSMODG00000039561 ENSMODG00000003574 ENSMODG00000010337 ENSMODG00000024948 SLC24A2 (ENSMODG00000003525) ##24 ENSMODG00000003439 DNAJA1 (ENSMODG00000003384) APTX (ENSMODG00000003365) TMEFF1 (ENSMODG00000003346) CAVIN4 (ENSMODG00000049552) PTPN3 (ENSMODG00000003330) EPB41L4B (ENSMODG00000003302) NANS (ENSMODG00000003270) Marsupialia_b ANCESTRAL SPECIES 18 ENSGT01000000214430.a.a.a.c.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00940000155007 ENSGT00940000153558.b ENSGT00940000156806 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000157888 ENSGT00940000158331 ENSGT00390000011081 ENSGT00950000182907.a.b.b.a ENSGT00390000004522 ENSGT00940000154420.A ENSGT00390000004643 Diprotodontia ANCESTRAL SPECIES 14 ENSGT01000000214430.a.a.a.c.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00940000155007 ENSGT00940000153558.b ENSGT00940000156806 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000157888 ENSGT00940000158331 ENSGT00390000011081 ENSGT00950000182907.a.b.b.a ENSGT00390000004522 ENSGT00390000004643 ENSGT00940000157140.b.a.b.a Diprotodontia_a ANCESTRAL SPECIES 13 ENSGT01000000214430.a.a.a.c.b.b.b.a.a ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.c.b.b.a.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00940000155007 ENSGT00940000153558.b ENSGT00940000156806 ENSGT00940000160714 ENSGT00950000182910.a.b ENSGT00940000157888 ENSGT00940000158331 ENSGT00390000011081 ENSGT00950000182907.a.b.b.a ENSGT00390000004522 ENSGT00390000004643 ENSGT00940000162270 Common wonbat MODERN SPECIES 903 ENSVURG00010012477 ENSVURG00010012449 HACD4 (ENSVURG00010012441) ##22 FOCAD (ENSVURG00010012373) ENSVURG00010012345 MLLT3 (ENSVURG00010012316) SLC24A2 (ENSVURG00010012288) ##24 SMU1 (ENSVURG00010012273) ENSVURG00010012265 APTX (ENSVURG00010012261) TMEFF1 (ENSVURG00010012209) CAVIN4 (ENSVURG00010012193) PTPN3 (ENSVURG00010012117) ENSVURG00010012050 NANS (ENSVURG00010012037) ANP32B (ENSVURG00010012016) TRMO (ENSVURG00010012005) FOXE1 (ENSVURG00010011999) koala MODERN SPECIES 252 ENSPCIG00000029889 CDC42SE2 (ENSPCIG00000037457) ENSPCIG00000036928 ENSPCIG00000008998 ENSPCIG00000036197 ENSPCIG00000036951 ENSPCIG00000022733 ENSPCIG00000034005 ENSPCIG00000033177 ENSPCIG00000036788 ENSPCIG00000034589 ENSPCIG00000033027 ENSPCIG00000037209 ENSPCIG00000033353 ENSPCIG00000035870 HACD4 (ENSPCIG00000029881) ##22 ENSPCIG00000029879 FOCAD (ENSPCIG00000029869) ENSPCIG00000031681 Wallaby MODERN SPECIES 9527 ENSMEUG00000013512 ##22 Tasmanian devil MODERN SPECIES EFNA5 (ENSSHAG00000024211) NUDT12 (ENSSHAG00000003181) ENSSHAG00000029665 MACIR (ENSSHAG00000031554) PPIP5K2 (ENSSHAG00000001399) GIN1 (ENSSHAG00000000694) PAM (ENSSHAG00000022133) ENSSHAG00000001507 ENSSHAG00000031750 ENSSHAG00000026188 ENSSHAG00000026686 ENSSHAG00000001053 ENSSHAG00000017733 ENSSHAG00000017686 ENSSHAG00000017649 HACD4 (ENSSHAG00000017465) ##22 FOCAD (ENSSHAG00000016944) MLLT3 (ENSSHAG00000016108) ENSSHAG00000013071 ##24 ENSSHAG00000012520 ENSSHAG00000012366 ENSSHAG00000012205 ENSSHAG00000010984 ENSSHAG00000010897 ENSSHAG00000008314 ENSSHAG00000003628 ENSSHAG00000001789 ANP32B (ENSSHAG00000021013) ENSSHAG00000012582 ENSSHAG00000024091 TRMO (ENSSHAG00000031309) Eutheria ANCESTRAL SPECIES 7 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Atlantogenata ANCESTRAL SPECIES 68 ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Xenarthra ANCESTRAL SPECIES ENSGT00530000062962.b.b ##22 Sloth MODERN SPECIES 7067 HACD4 (ENSCHOG00000005608) ##22 Afrotheria ANCESTRAL SPECIES 116 ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Tenrec MODERN SPECIES 6529 HACD4 (ENSETEG00000001160) ##22 FOCAD (ENSETEG00000001146) MLLT3 (ENSETEG00000001142) Afrotheria_a ANCESTRAL SPECIES 118 ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Hyrax MODERN SPECIES 11511 HACD4 (ENSPCAG00000001242) ##22 Elephant MODERN SPECIES 472 IZUMO3 (ENSLAFG00000006472) ENSLAFG00000026655 ELAVL2 (ENSLAFG00000009938) DMRTA1 (ENSLAFG00000013860) CDKN2B (ENSLAFG00000022894) ENSLAFG00000009554 MTAP (ENSLAFG00000009552) ENSLAFG00000031123 ENSLAFG00000027976 ENSLAFG00000030457 ENSLAFG00000029104 ENSLAFG00000032074 ENSLAFG00000026307 ENSLAFG00000032702 IFNB1 (ENSLAFG00000031186) HACD4 (ENSLAFG00000011684) ##22 FOCAD (ENSLAFG00000011670) MLLT3 (ENSLAFG00000002042) SLC24A2 (ENSLAFG00000017523) ##24 ACER2 (ENSLAFG00000010767) ENSLAFG00000010766 DENND4C (ENSLAFG00000010751) PLIN2 (ENSLAFG00000011091) HAUS6 (ENSLAFG00000011084) RRAGA (ENSLAFG00000011082) SAXO1 (ENSLAFG00000011081) ADAMTSL1 (ENSLAFG00000011076) SH3GL2 (ENSLAFG00000005475) CNTLN (ENSLAFG00000007075) ENSLAFG00000027513 ENSLAFG00000021349 Boreoeutheria ANCESTRAL SPECIES 10 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Laurasiatheria ANCESTRAL SPECIES 9 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT01060000248998 Laurasiatheria_a ANCESTRAL SPECIES 11 ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000167452 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Laurasiatheria_b ANCESTRAL SPECIES 11 ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000167452 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Laurasiatheria_c ANCESTRAL SPECIES 11 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.r ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Equus ANCESTRAL SPECIES 37 ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.q ENSGT00950000182991.B.r.a ENSGT00950000182991.B.r.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.a.b.a ENSGT00940000154359.e ENSGT01000000214430.a.b.r ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b.q ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00940000154847.j ENSGT00440000034932 ENSGT00390000005844.a.b Donkey MODERN SPECIES 15 ENSEASG00005038182 ENSEASG00005032526 ENSEASG00005035161 ENSEASG00005027880 ENSEASG00005031350 ENSEASG00005027698 ENSEASG00005031524 ENSEASG00005030052 ENSEASG00005025726 ENSEASG00005027292 ENSEASG00005033651 ENSEASG00005028171 ENSEASG00005023535 ENSEASG00005023607 ENSEASG00005034932 HACD4 (ENSEASG00005018737) ##22 FOCAD (ENSEASG00005018789) ENSEASG00005038410 ENSEASG00005038180 MLLT3 (ENSEASG00005019193) ENSEASG00005019199 SLC24A2 (ENSEASG00005019206) ##24 ACER2 (ENSEASG00005019215) RPS6 (ENSEASG00005019216) DENND4C (ENSEASG00005019226) PLIN2 (ENSEASG00005019242) HAUS6 (ENSEASG00005019247) RRAGA (ENSEASG00005023970) SAXO1 (ENSEASG00005019269) ADAMTSL1 (ENSEASG00005019273) SH3GL2 (ENSEASG00005019277) Horse MODERN SPECIES 15 DMRTA1 (ENSECAG00000019138) CDKN2A (ENSECAG00000018552) ENSECAG00000060049 ENSECAG00000040430 ENSECAG00000033009 ENSECAG00000037786 IFNE (ENSECAG00000004315) ENSECAG00000054830 ENSECAG00000031604 IFN-OMEGA2 (ENSECAG00000036561) KLHL9 (ENSECAG00000005817) ENSECAG00000047150 IF1CA2 (ENSECAG00000042982) IF1CA1 (ENSECAG00000040808) IF1DA2 (ENSECAG00000057166) HACD4 (ENSECAG00000000343) ##22 FOCAD (ENSECAG00000001130) MLLT3 (ENSECAG00000023631) RPL26 (ENSECAG00000015757) SLC24A2 (ENSECAG00000020101) ##24 ACER2 (ENSECAG00000017054) RPS6 (ENSECAG00000016190) ENSECAG00000006417 DENND4C (ENSECAG00000000298) PLIN2 (ENSECAG00000024663) HAUS6 (ENSECAG00000014686) RRAGA (ENSECAG00000005729) SAXO1 (ENSECAG00000011294) ENSECAG00000059197 ADAMTSL1 (ENSECAG00000015972) SH3GL2 (ENSECAG00000009922) Chiroptera ANCESTRAL SPECIES 40 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.r ENSGT01000000214430.a.a.b ENSGT01000000214430.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Megabat MODERN SPECIES 2948 HACD4 (ENSPVAG00000006850) ##22 FOCAD (ENSPVAG00000006849) Microchiroptera ANCESTRAL SPECIES 36 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.r ENSGT01000000214430.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Greater horseshoe bat MODERN SPECIES 3 ENSRFEG00010007503 IFNE (ENSRFEG00010007517) ENSRFEG00010007530 ENSRFEG00010007545 ENSRFEG00010007618 ENSRFEG00010007636 ENSRFEG00010007711 ENSRFEG00010007732 ENSRFEG00010007820 KLHL9 (ENSRFEG00010007851) ENSRFEG00010007861 ENSRFEG00010007907 ENSRFEG00010007954 ENSRFEG00010007995 IFNB1 (ENSRFEG00010008047) HACD4 (ENSRFEG00010008060) ##22 FOCAD (ENSRFEG00010008104) MLLT3 (ENSRFEG00010008212) SLC24A2 (ENSRFEG00010008386) ##24 ENSRFEG00010008467 ACER2 (ENSRFEG00010008505) RPS6 (ENSRFEG00010008554) DENND4C (ENSRFEG00010008632) PLIN2 (ENSRFEG00010008729) HAUS6 (ENSRFEG00010008787) RRAGA (ENSRFEG00010008891) SAXO1 (ENSRFEG00010008917) ADAMTSL1 (ENSRFEG00010009043) SH3GL2 (ENSRFEG00010009214) CNTLN (ENSRFEG00010009257) BNC2 (ENSRFEG00010009307) Microbat MODERN SPECIES 1158 CDKN2A (ENSMLUG00000029865) ENSMLUG00000024291 ENSMLUG00000030508 MTAP (ENSMLUG00000014410) IFNE (ENSMLUG00000010970) ENSMLUG00000027376 ENSMLUG00000024850 ENSMLUG00000028931 ENSMLUG00000027612 ENSMLUG00000030465 ENSMLUG00000023736 ENSMLUG00000027734 ENSMLUG00000026947 KLHL9 (ENSMLUG00000007175) IFNB1 (ENSMLUG00000008021) HACD4 (ENSMLUG00000003980) ##22 FOCAD (ENSMLUG00000003955) MLLT3 (ENSMLUG00000003947) SLC24A2 (ENSMLUG00000017667) ##24 Carnivora ANCESTRAL SPECIES 18 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000167452 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Felidae ANCESTRAL SPECIES 16 ENSGT00950000183152.A.v ENSGT00940000156823.e ENSGT00390000008732.a.a.c.b.a ENSGT00390000012138.a.a.i.a.a ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.jb.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Panthera ANCESTRAL SPECIES 11 ENSGT00390000013920 ENSGT00390000017601 ENSGT00950000183152.A.v ENSGT00940000156823.e ENSGT00390000008732.a.a.c.b.a ENSGT00390000012138.a.a.i.a.a ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.jb.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Tiger MODERN SPECIES 588 IFT74 (ENSPTIG00000018434) LRRC19 (ENSPTIG00000019449) PLAA (ENSPTIG00000019644) CAAP1 (ENSPTIG00000020860) IZUMO3 (ENSPTIG00000021039) ENSPTIG00000006398 ELAVL2 (ENSPTIG00000005627) DMRTA1 (ENSPTIG00000008302) ENSPTIG00000009528 MTAP (ENSPTIG00000010060) IFNE (ENSPTIG00000006483) ENSPTIG00000006494 ENSPTIG00000012484 ENSPTIG00000015362 IFNB1 (ENSPTIG00000006556) HACD4 (ENSPTIG00000016456) ##22 FOCAD (ENSPTIG00000016961) ENSPTIG00000019535 ENSPTIG00000006649 ENSPTIG00000019938 SLC24A2 (ENSPTIG00000006232) ##24 ACER2 (ENSPTIG00000009123) RPS6 (ENSPTIG00000009901) DENND4C (ENSPTIG00000011537) PLIN2 (ENSPTIG00000012619) HAUS6 (ENSPTIG00000013541) RRAGA (ENSPTIG00000006849) SAXO1 (ENSPTIG00000016509) ADAMTSL1 (ENSPTIG00000017390) SH3GL2 (ENSPTIG00000008377) CNTLN (ENSPTIG00000009406) Panthera_a ANCESTRAL SPECIES 60 ENSGT01000000214430.a.a.a.a.a.a.b.e.a ENSGT01000000214430.a.a.a.a.a.b.jb.b ENSGT01000000214430.a.a.a.a.a.a.b.e.b ENSGT01000000214430.a.a.a.a.a.a.b.f.a ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b lion MODERN SPECIES 13 AOPEP (ENSPLOG00000009897) FANCC (ENSPLOG00000009864) PTCH1 (ENSPLOG00000009736) ERCC6L2 (ENSPLOG00000009574) ENSPLOG00000009543 HSD17B3 (ENSPLOG00000009419) SLC35D2 (ENSPLOG00000009228) ZNF367 (ENSPLOG00000009156) HABP4 (ENSPLOG00000009107) ENSPLOG00000008892 PRXL2C (ENSPLOG00000008735) ENSPLOG00000008712 ENSPLOG00000008697 ENSPLOG00000008664 ENSPLOG00000008634 HACD4 (ENSPLOG00000008580) ##22 FOCAD (ENSPLOG00000008398) MLLT3 (ENSPLOG00000008272) SLC24A2 (ENSPLOG00000008118) ##24 ACER2 (ENSPLOG00000008065) ENSPLOG00000008039 RPS6 (ENSPLOG00000007999) DENND4C (ENSPLOG00000007889) PLIN2 (ENSPLOG00000007840) HAUS6 (ENSPLOG00000007785) RRAGA (ENSPLOG00000007764) SAXO1 (ENSPLOG00000007710) ADAMTSL1 (ENSPLOG00000007398) SH3GL2 (ENSPLOG00000007300) CNTLN (ENSPLOG00000007270) ENSPLOG00000007241 leopard MODERN SPECIES 65 ENSPPRG00000003827 ENSPPRG00000003115 ENSPPRG00000002656 ENSPPRG00000021961 IFNB1 (ENSPPRG00000021934) HACD4 (ENSPPRG00000001657) ##22 FOCAD (ENSPPRG00000001545) ENSPPRG00000000619 MLLT3 (ENSPPRG00000000472) SLC24A2 (ENSPPRG00000000154) ##24 ACER2 (ENSPPRG00000023178) ENSPPRG00000023215 RPS6 (ENSPPRG00000023571) DENND4C (ENSPPRG00000023874) PLIN2 (ENSPPRG00000021465) HAUS6 (ENSPPRG00000021239) RRAGA (ENSPPRG00000021236) SAXO1 (ENSPPRG00000018241) ADAMTSL1 (ENSPPRG00000017489) SH3GL2 (ENSPPRG00000014326) CNTLN (ENSPPRG00000014202) Cat MODERN SPECIES 244 IZUMO3 (ENSFCAG00000015750) ENSFCAG00000025255 ELAVL2 (ENSFCAG00000011976) ENSFCAG00000040593 ENSFCAG00000040447 DMRTA1 (ENSFCAG00000014743) ENSFCAG00000038878 CDKN2A (ENSFCAG00000022826) MTAP (ENSFCAG00000038221) IFNW12 (ENSFCAG00000044935) IFNA7 (ENSFCAG00000046651) IFNA13 (ENSFCAG00000045072) KLHL9 (ENSFCAG00000012623) ENSFCAG00000023458 IFNB1 (ENSFCAG00000004604) HACD4 (ENSFCAG00000031990) ##22 ENSFCAG00000049870 FOCAD (ENSFCAG00000004596) MLLT3 (ENSFCAG00000023293) ENSFCAG00000048731 SLC24A2 (ENSFCAG00000010086) ##24 ACER2 (ENSFCAG00000002540) RPS6 (ENSFCAG00000002541) DENND4C (ENSFCAG00000001945) PLIN2 (ENSFCAG00000002659) HAUS6 (ENSFCAG00000028281) RRAGA (ENSFCAG00000022742) SAXO1 (ENSFCAG00000004841) ADAMTSL1 (ENSFCAG00000004840) ENSFCAG00000031200 SH3GL2 (ENSFCAG00000004584) Caniformia ANCESTRAL SPECIES 16 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000167452 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Canidae ANCESTRAL SPECIES 9 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.mb.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.mb.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00390000013102.f ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00950000185213 ENSGT00950000185182 ENSGT00940000156243 ENSGT00940000160529 Canis_lupus ANCESTRAL SPECIES 15 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.mb.a.b.a.a.b.b.b.a.b ENSGT01000000214430.a.a.a.a.a.b.mb.a.b.a.a.b.b.b.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00390000013102.f ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00950000185213 ENSGT00950000185182 ENSGT00940000156243 ENSGT00940000160529 Dingo MODERN SPECIES 366 DMRTA1 (ENSCAFG00020013824) CDKN2B (ENSCAFG00020013797) ENSCAFG00020013796 MTAP (ENSCAFG00020013792) IFNE (ENSCAFG00020013779) ENSCAFG00020013776 ENSCAFG00020013769 ENSCAFG00020013761 ENSCAFG00020013757 KLHL9 (ENSCAFG00020013752) ENSCAFG00020013748 ENSCAFG00020013747 ENSCAFG00020013743 ENSCAFG00020013742 ENSCAFG00020013733 HACD4 (ENSCAFG00020013722) ##22 FOCAD (ENSCAFG00020013157) MLLT3 (ENSCAFG00020013068) SLC24A2 (ENSCAFG00020013013) ##24 ACER2 (ENSCAFG00020012988) RPS6 (ENSCAFG00020012985) DENND4C (ENSCAFG00020012952) ENSCAFG00020012946 PLIN2 (ENSCAFG00020012935) HAUS6 (ENSCAFG00020012926) RRAGA (ENSCAFG00020012925) SAXO1 (ENSCAFG00020012924) ENSCAFG00020012910 ENSCAFG00020012903 ENSCAFG00020012896 SH3GL2 (ENSCAFG00020012892) Dog MODERN SPECIES 2 ELAVL2 (ENSCAFG00845016769) ENSCAFG00845016700 DMRTA1 (ENSCAFG00845016666) CDKN2B (ENSCAFG00845016466) MTAP (ENSCAFG00845016288) IFNA7 (ENSCAFG00845016199) ENSCAFG00845016171 ENSCAFG00845016139 ENSCAFG00845016109 ENSCAFG00845016083 ENSCAFG00845015906 ENSCAFG00845016397 IFNA5 (ENSCAFG00845016367) ENSCAFG00845016327 IFNB1 (ENSCAFG00845016293) HACD4 (ENSCAFG00845016235) ##22 FOCAD (ENSCAFG00845015191) MLLT3 (ENSCAFG00845014820) SLC24A2 (ENSCAFG00845014662) ##24 ACER2 (ENSCAFG00845014579) RPS6 (ENSCAFG00845014546) ENSCAFG00845014525 DENND4C (ENSCAFG00845014314) PLIN2 (ENSCAFG00845014245) HAUS6 (ENSCAFG00845014208) RRAGA (ENSCAFG00845014185) SAXO1 (ENSCAFG00845014141) ENSCAFG00845014115 ADAMTSL1 (ENSCAFG00845013926) SH3GL2 (ENSCAFG00845013834) CNTLN (ENSCAFG00845013467) Red fox MODERN SPECIES 36 ENSVVUG00000001342 ENSVVUG00000001339 ENSVVUG00000001330 IFNB1 (ENSVVUG00000001318) HACD4 (ENSVVUG00000001307) ##22 FOCAD (ENSVVUG00000000983) MLLT3 (ENSVVUG00000000911) SLC24A2 (ENSVVUG00000000845) ##24 ACER2 (ENSVVUG00000000814) ENSVVUG00000000801 ENSVVUG00000000779 PLIN2 (ENSVVUG00000000771) DENND4C (ENSVVUG00000000667) HAUS6 (ENSVVUG00000000634) RRAGA (ENSVVUG00000000604) SAXO1 (ENSVVUG00000000588) ENSVVUG00000000571 ADAMTSL1 (ENSVVUG00000000485) SH3GL2 (ENSVVUG00000000404) CNTLN (ENSVVUG00000000301) Caniformia_b ANCESTRAL SPECIES 12 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000167452 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 Mustelinae ANCESTRAL SPECIES 98 ENSGT00940000162423 ENSGT00940000167452 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.pb.a.a ENSGT01000000214430.a.a.a.a.a.b.pb.a.b.a.a.a ENSGT01000000214430.a.a.a.a.a.b.pb.a.b.a.b ENSGT01000000214430.a.a.a.a.a.b.qb ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.pb.b ENSGT01000000214430.a.a.a.a.a.b.pb.a.b.b.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b American mink MODERN SPECIES 117 TUSC1 (ENSNVIG00000012160) IZUMO3 (ENSNVIG00000012191) ELAV2 (ENSNVIG00000012261) DMRTA1 (ENSNVIG00000012357) CDKN2B (ENSNVIG00000012369) MTAP (ENSNVIG00000012386) ENSNVIG00000012437 ENSNVIG00000012457 KLHL9 (ENSNVIG00000012468) ENSNVIG00000012477 ENSNVIG00000012495 ENSNVIG00000012512 ENSNVIG00000012526 ENSNVIG00000012545 IFNB1 (ENSNVIG00000012557) HACD4 (ENSNVIG00000012558) ##22 FOCAD (ENSNVIG00000012579) ENSNVIG00000012773 ENSNVIG00000012786 SLC24A2 (ENSNVIG00000012827) ##24 ACER2 (ENSNVIG00000012884) ENSNVIG00000012899 DENND4C (ENSNVIG00000012940) ENSNVIG00000013145 HAUS6 (ENSNVIG00000013158) RRAGA (ENSNVIG00000013224) SAXO1 (ENSNVIG00000013228) ENSNVIG00000013271 ADAMTSL1 (ENSNVIG00000013284) Ferret MODERN SPECIES 244 ENSMPUG00000019804 ENSMPUG00000019808 ENSMPUG00000019811 ENSMPUG00000019816 ENSMPUG00000019818 IFNG (ENSMPUG00000019499) ENSMPUG00000019506 ENSMPUG00000015980 KLHL9 (ENSMPUG00000019508) ENSMPUG00000015982 ENSMPUG00000019513 ENSMPUG00000019520 ENSMPUG00000019523 ENSMPUG00000019526 IFNB1 (ENSMPUG00000019528) HACD4 (ENSMPUG00000015987) ##22 FOCAD (ENSMPUG00000015988) MLLT3 (ENSMPUG00000015992) SLC24A2 (ENSMPUG00000016008) ##24 ACER2 (ENSMPUG00000016010) ENSMPUG00000016013 DENND4C (ENSMPUG00000016014) Ursidae ANCESTRAL SPECIES 6 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.a.a.a.b.ob ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.nb.a ENSGT01000000214430.a.a.a.a.a.b.nb.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215.c ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Giant Panda MODERN SPECIES 17 ELAVL2 (ENSAMEG00000007555) DMRTA1 (ENSAMEG00000007553) ENSAMEG00000009154 CDKN2B (ENSAMEG00000007545) ENSAMEG00000019101 MTAP (ENSAMEG00000007509) ENSAMEG00000028633 ENSAMEG00000030690 ENSAMEG00000020239 KLHL9 (ENSAMEG00000020249) ENSAMEG00000020238 ENSAMEG00000027172 ENSAMEG00000003028 IFNB1 (ENSAMEG00000020237) ENSAMEG00000026360 HACD4 (ENSAMEG00000003020) ##22 FOCAD (ENSAMEG00000002988) MLLT3 (ENSAMEG00000002954) SLC24A2 (ENSAMEG00000002946) ##24 ACER2 (ENSAMEG00000026399) ENSAMEG00000030301 RPS6 (ENSAMEG00000002925) DENND4C (ENSAMEG00000002859) PLIN2 (ENSAMEG00000002827) HAUS6 (ENSAMEG00000002777) RRAGA (ENSAMEG00000030176) SAXO1 (ENSAMEG00000014021) ADAMTSL1 (ENSAMEG00000010811) SH3GL2 (ENSAMEG00000010823) CNTLN (ENSAMEG00000026276) BNC2 (ENSAMEG00000012362) Ursus ANCESTRAL SPECIES 166 ENSGT01000000214430.a.a.a.a.b.o.b.b ENSGT01000000214430.a.a.a.a.a.b.nb.a ENSGT01000000214430.a.a.a.a.a.b.nb.b.c.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215.c ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b American black bear MODERN SPECIES 1380 ENSUAMG00000009411 ENSUAMG00000009402 HACD4 (ENSUAMG00000009381) ##22 FOCAD (ENSUAMG00000007724) Polar bear MODERN SPECIES 163 KLHL9 (ENSUMAG00000015939) ENSUMAG00000015945 ENSUMAG00000015949 ENSUMAG00000015953 ENSUMAG00000015958 ENSUMAG00000015962 ENSUMAG00000015997 HACD4 (ENSUMAG00000016058) ##22 FOCAD (ENSUMAG00000016208) ENSUMAG00000016821 ENSUMAG00000016826 ENSUMAG00000016829 SLC24A2 (ENSUMAG00000016841) ##24 ACER2 (ENSUMAG00000016866) ENSUMAG00000016872 DENND4C (ENSUMAG00000016925) PLIN2 (ENSUMAG00000017117) ENSUMAG00000017125 HAUS6 (ENSUMAG00000017141) RRAGA (ENSUMAG00000017178) SAXO1 (ENSUMAG00000017184) ENSUMAG00000017219 ENSUMAG00000017257 Artiodactyla ANCESTRAL SPECIES 7 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Suina ANCESTRAL SPECIES 23 ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b.e.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.g ENSGT01000000214430.a.a.a.a.b.e.a ENSGT01000000214430.a.a.a.a.a.a.b.h ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00940000174448 ENSGT00390000005844.a.b Chacoan peccary MODERN SPECIES 784 ENSCWAG00000013402 ENSCWAG00000013350 ENSCWAG00000013324 ENSCWAG00000013303 ENSCWAG00000013290 ENSCWAG00000013224 ENSCWAG00000013210 ENSCWAG00000013195 KLHL9 (ENSCWAG00000013179) ENSCWAG00000013149 ENSCWAG00000013115 ENSCWAG00000013033 ENSCWAG00000013010 ENSCWAG00000012979 IFNB1 (ENSCWAG00000012961) HACD4 (ENSCWAG00000012927) ##22 FOCAD (ENSCWAG00000012815) MLLT3 (ENSCWAG00000012463) SLC24A2 (ENSCWAG00000012259) ##24 ACER2 (ENSCWAG00000012184) RPS6 (ENSCWAG00000012122) DENND4C (ENSCWAG00000011949) PLIN2 (ENSCWAG00000011890) HAUS6 (ENSCWAG00000011780) RRAGA (ENSCWAG00000011766) SAXO1 (ENSCWAG00000011660) Pig MODERN SPECIES KLHL9 (ENSSSCG00000005150) IFN-ALPHA-4 (ENSSSCG00000059717) IFN-OMEGA-2 (ENSSSCG00000033910) IFN-DELTA-1 (ENSSSCG00000005152) IFN-DELTA-9 (ENSSSCG00000063223) IFN-ALPHA-15 (ENSSSCG00000031149) IFN-DELTA-10 (ENSSSCG00000057852) IFN-OMEGA-6 (ENSSSCG00000051680) IFN-DELTA-11 (ENSSSCG00000060250) ENSSSCG00000050619 IFN-DELTA-4 (ENSSSCG00000058698) IFN-ALPHA-13 (ENSSSCG00000055846) IFN-OMEGA-5 (ENSSSCG00000056145) IFN-ALPHAOMEGA (ENSSSCG00000021504) IFNB1 (ENSSSCG00000005163) HACD4 (ENSSSCG00000005164) ##22 FOCAD (ENSSSCG00000028406) ENSSSCG00000050047 MLLT3 (ENSSSCG00000005166) ENSSSCG00000061715 ENSSSCG00000056042 ENSSSCG00000049786 SLC24A2 (ENSSSCG00000005167) ##24 ACER2 (ENSSSCG00000034213) RPS6 (ENSSSCG00000005169) DENND4C (ENSSSCG00000005170) PLIN2 (ENSSSCG00000035863) HAUS6 (ENSSSCG00000005173) RRAGA (ENSSSCG00000005174) SAXO1 (ENSSSCG00000040408) ADAMTSL1 (ENSSSCG00000040366) Artiodactyla_a ANCESTRAL SPECIES 6 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Camelidae ANCESTRAL SPECIES 5 ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Arabian camel MODERN SPECIES 30 CDKN2B (ENSCDRG00005001668) ENSCDRG00005001648 ENSCDRG00005001627 IFNE (ENSCDRG00005001617) ENSCDRG00005001609 ENSCDRG00005001595 ENSCDRG00005001572 ENSCDRG00005001560 ENSCDRG00005001540 ENSCDRG00005001435 ENSCDRG00005001419 ENSCDRG00005001408 ENSCDRG00005001399 ENSCDRG00005001391 IFNB1 (ENSCDRG00005001381) HACD4 (ENSCDRG00005001352) ##22 FOCAD (ENSCDRG00005001266) MLLT3 (ENSCDRG00005001149) SLC24A2 (ENSCDRG00005001059) ##24 ACER2 (ENSCDRG00005001013) RPS6 (ENSCDRG00005000992) DENND4C (ENSCDRG00005000875) PLIN2 (ENSCDRG00005000820) HAUS6 (ENSCDRG00005000742) RRAGA (ENSCDRG00005000730) SAXO1 (ENSCDRG00005000701) ENSCDRG00005000592 ENSCDRG00005000656 SH3GL2 (ENSCDRG00005000538) CNTLN (ENSCDRG00005000497) BNC2 (ENSCDRG00005000440) Alpaca MODERN SPECIES 1264 HACD4 (ENSVPAG00000006038) ##22 FOCAD (ENSVPAG00000006036) MLLT3 (ENSVPAG00000006035) SLC24A2 (ENSVPAG00000006033) ##24 ENSVPAG00000006032 RPS6 (ENSVPAG00000006030) DENND4C (ENSVPAG00000006028) PLIN2 (ENSVPAG00000006026) HAUS6 (ENSVPAG00000006025) Artiodactyla_b ANCESTRAL SPECIES 7 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Cetacea ANCESTRAL SPECIES 9 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT00940000163158.b.b.a.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m ENSGT01000000214430.a.a.a.a.a.b.z ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.n ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT01000000221453 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Odontoceti ANCESTRAL SPECIES 8 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT00940000163158.b.b.a.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.a ENSGT01000000214430.a.a.a.a.a.b.z ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.a.a.b.m.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT01000000221453 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT01010000230301 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00940000167219 Odontoceti_a ANCESTRAL SPECIES 15 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT00940000163158.b.b.a.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.a ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.a.a.b.m.b.b ENSGT01000000214430.a.a.a.a.a.a.b.m.b.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT01000000221453 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT01010000230301 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00940000167219 Odontoceti_b ANCESTRAL SPECIES 8 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00390000007370.j ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT00940000163158.b.b.a.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.a ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.a.a.b.m.b.b ENSGT01000000214430.a.a.a.a.a.a.b.m.b.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT01000000221453 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT01010000230301 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00940000167219 Monodontidae ANCESTRAL SPECIES 5 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00390000007370.j ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT00940000163158.b.b.a.b ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.m.a ENSGT01000000214430.a.a.a.a.a.b.y ENSGT01000000214430.a.a.a.a.b.k.a ENSGT01000000214430.a.a.a.a.a.a.b.m.b.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT01000000221453 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00940000167219 ENSGT00440000034932 Narwhal MODERN SPECIES 312 ENSMMNG00015015785 CDKN2B (ENSMMNG00015015802) CDKN2A (ENSMMNG00015015826) MTAP (ENSMMNG00015015858) ENSMMNG00015015900 IFNE (ENSMMNG00015015924) ENSMMNG00015015943 ENSMMNG00015015959 ENSMMNG00015015976 ENSMMNG00015015997 ENSMMNG00015016023 ENSMMNG00015016051 ENSMMNG00015016081 ENSMMNG00015016113 IFNB1 (ENSMMNG00015016208) HACD4 (ENSMMNG00015016222) ##22 FOCAD (ENSMMNG00015016274) ENSMMNG00015016374 MLLT3 (ENSMMNG00015016437) ENSMMNG00015016541 SLC24A2 (ENSMMNG00015016568) ##24 ACER2 (ENSMMNG00015016658) ENSMMNG00015016682 DENND4C (ENSMMNG00015016748) PLIN2 (ENSMMNG00015016875) HAUS6 (ENSMMNG00015016919) RRAGA (ENSMMNG00015017043) SAXO1 (ENSMMNG00015017061) ADAMTSL1 (ENSMMNG00015017181) SH3GL2 (ENSMMNG00015017433) CNTLN (ENSMMNG00015017488) Beluga whale MODERN SPECIES 50 ENSDLEG00000020732 DMRTA1 (ENSDLEG00000020730) ENSDLEG00000020728 CDKN2A (ENSDLEG00000020727) MTAP (ENSDLEG00000020720) ENSDLEG00000020715 IFNE (ENSDLEG00000020712) ENSDLEG00000020711 ENSDLEG00000020708 ENSDLEG00000020704 ENSDLEG00000020697 ENSDLEG00000020694 ENSDLEG00000020689 ENSDLEG00000020680 IFNB1 (ENSDLEG00000020677) HACD4 (ENSDLEG00000020669) ##22 FOCAD (ENSDLEG00000020454) ENSDLEG00000020429 MLLT3 (ENSDLEG00000020420) SLC24A2 (ENSDLEG00000020410) ##24 ACER2 (ENSDLEG00000020402) ENSDLEG00000020394 DENND4C (ENSDLEG00000020356) PLIN2 (ENSDLEG00000020346) HAUS6 (ENSDLEG00000020327) RRAGA (ENSDLEG00000020323) SAXO1 (ENSDLEG00000020320) ADAMTSL1 (ENSDLEG00000020295) SH3GL2 (ENSDLEG00000020276) ENSDLEG00000020272 CNTLN (ENSDLEG00000020249) Vaquita MODERN SPECIES 17 ENSPSNG00000001333 CDKN2B (ENSPSNG00000001319) CDKN2A (ENSPSNG00000001297) MTAP (ENSPSNG00000001269) ENSPSNG00000001246 IFNE (ENSPSNG00000001235) ENSPSNG00000001205 ENSPSNG00000001196 ENSPSNG00000001176 ENSPSNG00000001161 ENSPSNG00000001145 ENSPSNG00000001130 ENSPSNG00000001121 IFNB1 (ENSPSNG00000001113) ENSPSNG00000001095 HACD4 (ENSPSNG00000001068) ##22 FOCAD (ENSPSNG00000001018) ENSPSNG00000000980 MLLT3 (ENSPSNG00000000909) ENSPSNG00000000874 SLC24A2 (ENSPSNG00000000837) ##24 ENSPSNG00000000805 ACER2 (ENSPSNG00000000791) RPS6 (ENSPSNG00000000767) DENND4C (ENSPSNG00000000715) PLIN2 (ENSPSNG00000000648) HAUS6 (ENSPSNG00000000609) RRAGA (ENSPSNG00000000588) SAXO1 (ENSPSNG00000000559) ADAMTSL1 (ENSPSNG00000000378) SH3GL2 (ENSPSNG00000000201) Dolphin MODERN SPECIES 3754 HACD4 (ENSTTRG00000005314) ##22 Sperm whale MODERN SPECIES 20 IZUMO3 (ENSPCTG00005017059) ELAVL2 (ENSPCTG00005016896) DMRTA1 (ENSPCTG00005016828) CDKN2B (ENSPCTG00005016790) CDKN2A (ENSPCTG00005016737) MTAP (ENSPCTG00005016695) ENSPCTG00005016658 IFNE (ENSPCTG00005016639) ENSPCTG00005016584 ENSPCTG00005016562 ENSPCTG00005016427 ENSPCTG00005016338 ENSPCTG00005016288 ENSPCTG00005016273 IFNB1 (ENSPCTG00005016262) HACD4 (ENSPCTG00005016218) ##22 FOCAD (ENSPCTG00005015965) ENSPCTG00005015884 MLLT3 (ENSPCTG00005015633) ENSPCTG00005015576 SLC24A2 (ENSPCTG00005015305) ##24 ENSPCTG00005015236 ACER2 (ENSPCTG00005015192) RPS6 (ENSPCTG00005015082) DENND4C (ENSPCTG00005014899) PLIN2 (ENSPCTG00005014826) HAUS6 (ENSPCTG00005014663) RRAGA (ENSPCTG00005014645) SAXO1 (ENSPCTG00005014539) ADAMTSL1 (ENSPCTG00005014310) SH3GL2 (ENSPCTG00005014162) Blue whale MODERN SPECIES 17 ENSBMSG00010002649 IFNE (ENSBMSG00010002658) ENSBMSG00010002667 ENSBMSG00010002675 ENSBMSG00010002680 ENSBMSG00010002688 ENSBMSG00010002708 ENSBMSG00010002714 ENSBMSG00010000101 ENSBMSG00010000120 ENSBMSG00010000146 ENSBMSG00010000162 ENSBMSG00010000172 ENSBMSG00010000195 IFNB1 (ENSBMSG00010000216) HACD4 (ENSBMSG00010000241) ##22 FOCAD (ENSBMSG00010000274) ENSBMSG00010000328 MLLT3 (ENSBMSG00010000404) ENSBMSG00010000504 SLC24A2 (ENSBMSG00010000533) ##24 ACER2 (ENSBMSG00010000576) RPS6 (ENSBMSG00010000598) DENND4C (ENSBMSG00010000635) PLIN2 (ENSBMSG00010000722) HAUS6 (ENSBMSG00010000758) RRAGA (ENSBMSG00010000814) SAXO1 (ENSBMSG00010000850) ADAMTSL1 (ENSBMSG00010000917) SH3GL2 (ENSBMSG00010000983) CNTLN (ENSBMSG00010001014) Pecora ANCESTRAL SPECIES 30 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.b ENSGT01000000214430.a.a.a.a.b.h ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Yarkand deer MODERN SPECIES 21 ENSCHYG00000023179 ELAVL2 (ENSCHYG00000023207) DMRTA1 (ENSCHYG00000023312) ENSCHYG00000023337 ENSCHYG00000023368 ENSCHYG00000023395 IFNE (ENSCHYG00000023410) ENSCHYG00000023424 KLHL9 (ENSCHYG00000023441) ENSCHYG00000023454 ENSCHYG00000023495 ENSCHYG00000023566 ENSCHYG00000023573 ENSCHYG00000023588 ENSCHYG00000023601 HACD4 (ENSCHYG00000023620) ##22 FOCAD (ENSCHYG00000023701) MLLT3 (ENSCHYG00000014130) ENSCHYG00000014367 SLC24A2 (ENSCHYG00000014399) ##24 ACER2 (ENSCHYG00000014663) ENSCHYG00000014713 DENND4C (ENSCHYG00000014821) ENSCHYG00000015386 PLIN2 (ENSCHYG00000015475) HAUS6 (ENSCHYG00000015668) RRAGA (ENSCHYG00000015829) SAXO1 (ENSCHYG00000015986) ADAMTSL1 (ENSCHYG00000016203) ENSCHYG00000016808 ENSCHYG00000016858 Percora_a ANCESTRAL SPECIES 24 ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.b ENSGT01000000214430.a.a.a.a.b.h ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.a.a.b.a ENSGT01100000263642 ENSGT01000000214430.a.a.a.b.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00990000211532 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Siberian musk deer MODERN SPECIES 109 ENSMMSG00000001034 ENSMMSG00000001044 ENSMMSG00000001052 ENSMMSG00000001062 ENSMMSG00000001068 ENSMMSG00000001077 ENSMMSG00000001092 ENSMMSG00000001098 ENSMMSG00000001103 ENSMMSG00000001114 ENSMMSG00000001126 ENSMMSG00000001137 ENSMMSG00000001145 HACD4 (ENSMMSG00000001159) ##22 FOCAD (ENSMMSG00000001209) ENSMMSG00000001353 MLLT3 (ENSMMSG00000001379) SLC24A2 (ENSMMSG00000001457) ##24 ENSMMSG00000001522 ENSMMSG00000001530 ACER2 (ENSMMSG00000001538) ENSMMSG00000001558 DENND4C (ENSMMSG00000001593) PLIN2 (ENSMMSG00000001716) HAUS6 (ENSMMSG00000001754) RRAGA (ENSMMSG00000001818) SAXO1 (ENSMMSG00000001832) ADAMTSL1 (ENSMMSG00000001894) ENSMMSG00000002061 Bovidae ANCESTRAL SPECIES 14 ENSGT00550000074944 ENSGT00390000017010 ENSGT01100000266201 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000165099 ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.a.a.b.a ENSGT01100000263642 ENSGT01000000214430.a.a.a.b.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00990000211532 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154445.c.b ENSGT00940000160529 ENSGT00440000034932 Caprinae ANCESTRAL SPECIES 14 ENSGT01000000214430.a.b.m.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154445.c.b ENSGT00940000160529 ENSGT00440000034932 ENSGT01010000222946.d.a Goat MODERN SPECIES 27 ENSCHIG00000013395 ENSCHIG00000010378 ENSCHIG00000009971 ENSCHIG00000009705 ENSCHIG00000010154 ENSCHIG00000011735 ENSCHIG00000010419 ENSCHIG00000010736 ENSCHIG00000015822 ENSCHIG00000012305 ENSCHIG00000012994 ENSCHIG00000025562 ENSCHIG00000002399 ENSCHIG00000013134 ENSCHIG00000002920 HACD4 (ENSCHIG00000006620) ##22 FOCAD (ENSCHIG00000024141) MLLT3 (ENSCHIG00000019549) ENSCHIG00000007895 SLC24A2 (ENSCHIG00000025681) ##24 ACER2 (ENSCHIG00000023132) RPS6 (ENSCHIG00000010409) DENND4C (ENSCHIG00000022814) PLIN2 (ENSCHIG00000013839) HAUS6 (ENSCHIG00000024615) ENSCHIG00000015472 RRAGA (ENSCHIG00000004994) SAXO1 (ENSCHIG00000015222) ADAMTSL1 (ENSCHIG00000025981) SH3GL2 (ENSCHIG00000020328) CNTLN (ENSCHIG00000013033) Rambouillet Sheep MODERN SPECIES 11 ENSOARG00020006836 ENSOARG00020006824 ENSOARG00020006747 ENSOARG00020006730 ENSOARG00020006667 ENSOARG00020006635 ENSOARG00020006624 ENSOARG00020006614 ENSOARG00020006601 ENSOARG00020006572 ENSOARG00020006545 ENSOARG00020006532 ENSOARG00020022842 ENSOARG00020022827 ENSOARG00020022810 HACD4 (ENSOARG00020022780) ##22 FOCAD (ENSOARG00020022657) MLLT3 (ENSOARG00020022520) SLC24A2 (ENSOARG00020022346) ##24 ACER2 (ENSOARG00020022302) RPS6 (ENSOARG00020022265) DENND4C (ENSOARG00020021882) ENSOARG00020021812 PLIN2 (ENSOARG00020021608) RRAGA (ENSOARG00020021439) SAXO1 (ENSOARG00020021405) ADAMTSL1 (ENSOARG00020020780) ENSOARG00020020688 SH3GL2 (ENSOARG00020020587) ENSOARG00020020547 CNTLN (ENSOARG00020019193) Bovinae ANCESTRAL SPECIES 14 ENSGT01000000214430.a.a.a.a.a.b.`b.b.b.b ENSGT01000000214430.a.a.a.a.b.h.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.`b.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.`b.b.b.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.b.k.b.a.b.a ENSGT01100000263642.a ENSGT01000000214430.a.b.l ENSGT01000000214430.a.a.a.b.b ENSGT01000000214430.a.b.k.b.b ENSGT01000000214430.a.b.k.a ENSGT01000000214430.a.a.a.a.b.g.a ENSGT01000000214430.a.b.k.b.a.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00390000009268.eb ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00990000211532 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b.a.a.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154445.c.b ENSGT00940000160529 American bison MODERN SPECIES 3290 HSD17B10 (ENSBBBG00000017170) RIBC1 (ENSBBBG00000017197) SMC1A (ENSBBBG00000008345) ENSBBBG00000017378 ENSBBBG00000017386 ENSBBBG00000008761 ENSBBBG00000017405 ENSBBBG00000008346 ENSBBBG00000017422 HACD4 (ENSBBBG00000017431) ##22 FOCAD (ENSBBBG00000007435) ENSBBBG00000017573 MLLT3 (ENSBBBG00000004360) SLC24A2 (ENSBBBG00000004372) ##24 ENSBBBG00000017663 ACER2 (ENSBBBG00000017674) ENSBBBG00000017694 DENND4C (ENSBBBG00000017798) PLIN2 (ENSBBBG00000017830) HAUS6 (ENSBBBG00000017870) ENSBBBG00000017875 SAXO1 (ENSBBBG00000017886) ADAMTSL1 (ENSBBBG00000008934) SH3GL2 (ENSBBBG00000018088) CNTLN (ENSBBBG00000018243) Bos ANCESTRAL SPECIES 10 ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.`b.b.b.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.b.k.b.a.b.a ENSGT01100000263642.a ENSGT01000000214430.a.b.l ENSGT01000000214430.a.a.a.b.b ENSGT01000000214430.a.b.k.b.a.b.b.a ENSGT01100000263642.b ENSGT01000000214430.a.b.k.b.a.b.b.b ENSGT01000000214430.a.a.a.b.a ENSGT01000000214430.a.b.k.b.b ENSGT01000000214430.a.b.k.a ENSGT01000000214430.a.a.a.a.b.g.a ENSGT01000000214430.a.b.k.b.a.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00390000009268.eb ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00990000211532 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b.a.a.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154445.c.b ENSGT00940000160529 Bos_a ANCESTRAL SPECIES 69 ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.b.a ENSGT01000000214430.a.a.a.a.b.h.a ENSGT01000000214430.a.a.a.a.a.b.`b.b.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.a.a ENSGT01000000214430.a.a.a.a.a.b.`b.b.a.a.b.b.a ENSGT01000000214430.a.a.a.a.a.b.`b.b.a.a.b.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.b.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01000000214430.a.b.k.b.a.b.a ENSGT01100000263642.a ENSGT01000000214430.a.b.l ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00390000009268.eb ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b.a.a.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Wild yak MODERN SPECIES 1008 ENSBMUG00000006569 ENSBMUG00000006561 ENSBMUG00000006552 ENSBMUG00000006544 ENSBMUG00000006536 ENSBMUG00000006527 HACD4 (ENSBMUG00000006517) ##22 FOCAD (ENSBMUG00000006478) MLLT3 (ENSBMUG00000006402) ENSBMUG00000006362 ##24 SHROOM4 (ENSBMUG00000006348) BMP15 (ENSBMUG00000006317) ENSBMUG00000006307 ENSBMUG00000006297 Domestic yak MODERN SPECIES 26 ENSBGRG00000002336 ENSBGRG00000002330 ENSBGRG00000002307 ENSBGRG00000002301 ENSBGRG00000002295 ENSBGRG00000002279 ENSBGRG00000002271 ENSBGRG00000002261 ENSBGRG00000002255 ENSBGRG00000002248 ENSBGRG00000002239 ENSBGRG00000002231 ENSBGRG00000002218 ENSBGRG00000002209 ENSBGRG00000002201 HACD4 (ENSBGRG00000002177) ##22 FOCAD (ENSBGRG00000002147) ENSBGRG00000002123 MLLT3 (ENSBGRG00000002074) SLC24A2 (ENSBGRG00000002022) ##24 ACER2 (ENSBGRG00000001992) ENSBGRG00000001975 RPS6 (ENSBGRG00000001942) DENND4C (ENSBGRG00000001896) PLIN2 (ENSBGRG00000001854) ENSBGRG00000001843 HAUS6 (ENSBGRG00000001813) ENSBGRG00000001802 SAXO1 (ENSBGRG00000001788) ADAMTSL1 (ENSBGRG00000001481) SH3GL2 (ENSBGRG00000001359) Bos_b ANCESTRAL SPECIES 3 ENSGT01000000214430.a.a.a.a.a.b.`b.b.a.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.`b.a.a.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.b.l.b.a.a.b.a.b.a ENSGT01000000214430.a.a.a.a.b.h.a ENSGT01000000214430.a.a.a.a.a.b.`b.b.b.a ENSGT01000000214430.a.a.a.a.a.a.b.l.b.b.a.b.a ENSGT01100000263642.a ENSGT01000000214430.a.b.l ENSGT01000000214430.a.a.a.b.b ENSGT01000000214430.a.b.k.b.b ENSGT01000000214430.a.b.k.a ENSGT01000000214430.a.a.a.a.b.g.a ENSGT01000000214430.a.b.k.b.a.a ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00990000211532 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b.a.a.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000154445.c.b ENSGT00940000160529 ENSGT00440000034932 Cow MODERN SPECIES 27 ENSBTAG00000048428 ENSBTAG00000051881 ENSBTAG00000053037 ENSBTAG00000053413 IFNB3 (ENSBTAG00000055306) IFNB3 (ENSBTAG00000049948) IFNB3 (ENSBTAG00000055103) IFNB3 (ENSBTAG00000050468) IFNB3 (ENSBTAG00000051622) IFNB3 (ENSBTAG00000048993) ENSBTAG00000046967 ENSBTAG00000048634 IF1DA6 (ENSBTAG00000054945) ENSBTAG00000052820 ENSBTAG00000053367 HACD4 (ENSBTAG00000017741) ##22 FOCAD (ENSBTAG00000038181) MLLT3 (ENSBTAG00000014124) SLC24A2 (ENSBTAG00000043972) ##24 ENSBTAG00000054622 ACER2 (ENSBTAG00000010821) RPS6 (ENSBTAG00000023462) DENND4C (ENSBTAG00000003097) PLIN2 (ENSBTAG00000005718) HAUS6 (ENSBTAG00000019843) RRAGA (ENSBTAG00000033543) SAXO1 (ENSBTAG00000001322) ADAMTSL1 (ENSBTAG00000002997) ENSBTAG00000052821 SH3GL2 (ENSBTAG00000014103) CNTLN (ENSBTAG00000001847) Hybrid Bos Indicus MODERN SPECIES 27 ENSBIXG00005025371 ENSBIXG00005025357 ENSBIXG00005025334 ENSBIXG00005025326 ENSBIXG00005025319 ENSBIXG00005025307 ENSBIXG00005025289 ENSBIXG00005025284 ENSBIXG00005025276 ENSBIXG00005005772 ENSBIXG00005025256 ENSBIXG00005025239 ENSBIXG00005025225 ENSBIXG00005025219 ENSBIXG00005025191 HACD4 (ENSBIXG00005025173) ##22 ENSBIXG00005025155 FOCAD (ENSBIXG00005025116) ENSBIXG00005025036 ENSBIXG00005025023 MLLT3 (ENSBIXG00005024977) SLC24A2 (ENSBIXG00005024850) ##24 ENSBIXG00005024768 ACER2 (ENSBIXG00005024735) RPS6 (ENSBIXG00005024714) DENND4C (ENSBIXG00005024659) PLIN2 (ENSBIXG00005024552) HAUS6 (ENSBIXG00005024512) ENSBIXG00005024481 SAXO1 (ENSBIXG00005024469) ADAMTSL1 (ENSBIXG00005024378) Eulipotyphla ANCESTRAL SPECIES 933 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 Hedgehog MODERN SPECIES 7953 HACD4 (ENSEEUG00000005380) ##22 FOCAD (ENSEEUG00000005106) Common shrew MODERN SPECIES 6248 HACD4 (ENSSARG00000007453) ##22 FOCAD (ENSSARG00000007383) Euarchontoglires ANCESTRAL SPECIES 10 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Primates ANCESTRAL SPECIES 9 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00410000028916 Strepsirrhini ANCESTRAL SPECIES 8 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Bushbaby MODERN SPECIES 121 ELAVL2 (ENSOGAG00000016228) DMRTA1 (ENSOGAG00000012178) ENSOGAG00000033113 CDKN2B (ENSOGAG00000011002) CDKN2A (ENSOGAG00000007892) MTAP (ENSOGAG00000007889) IFNE (ENSOGAG00000013610) ENSOGAG00000027191 ENSOGAG00000030880 ENSOGAG00000028717 ENSOGAG00000033309 ENSOGAG00000027157 KLHL9 (ENSOGAG00000025932) ENSOGAG00000025328 IFNB1 (ENSOGAG00000007828) HACD4 (ENSOGAG00000007825) ##22 FOCAD (ENSOGAG00000007818) ENSOGAG00000029322 ENSOGAG00000024861 SLC24A2 (ENSOGAG00000010603) ##24 ENSOGAG00000032502 ACER2 (ENSOGAG00000016257) RPS6 (ENSOGAG00000016254) ENSOGAG00000016242 ENSOGAG00000033404 ENSOGAG00000026475 PLIN2 (ENSOGAG00000006364) HAUS6 (ENSOGAG00000006361) SAXO1 (ENSOGAG00000006354) ENSOGAG00000016604 ENSOGAG00000016595 Lemuriformes ANCESTRAL SPECIES 34 ENSGT00390000010786 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 28 KIFC1 (ENSMICG00000005648) PHF1 (ENSMICG00000005660) CUTA (ENSMICG00000005673) SYNGAP1 (ENSMICG00000005678) SFTA2 (ENSMICG00000030909) ENSMICG00000035395 ENSMICG00000031166 PSMB9 (ENSMICG00000015307) TAP1 (ENSMICG00000015264) PSMB8 (ENSMICG00000015254) TAP2 (ENSMICG00000015245) HLA-DOB (ENSMICG00000034483) ENSMICG00000031829 ENSMICG00000044751 ENSMICG00000003714 ENSMICG00000028538 ##22 ENSMICG00000036984 ENSMICG00000035687 HLA-DRA (ENSMICG00000006228) ENSMICG00000037923 TREML2 (ENSMICG00000027522) ENSMICG00000041702 TREM2 (ENSMICG00000009719) TREML1 (ENSMICG00000035283) NFYA (ENSMICG00000009686) ENSMICG00000038280 APOBEC2 (ENSMICG00000043339) TSPO2 (ENSMICG00000044730) UNC5CL (ENSMICG00000009658) LRFN2 (ENSMICG00000008432) MOCS1 (ENSMICG00000009073) Mouse lemur MODERN SPECIES 1 TRPM6 (ENSMICG00000007514) C9orf40 (ENSMICG00000028036) CARNMT1 (ENSMICG00000007542) NMRK1 (ENSMICG00000007552) OSTF1 (ENSMICG00000007556) ENSMICG00000002750 PCSK5 (ENSMICG00000014046) ENSMICG00000045076 IZUMO3 (ENSMICG00000011839) ELAVL2 (ENSMICG00000001558) DMRTA1 (ENSMICG00000046386) CDKN2B (ENSMICG00000031833) CDKN2A (ENSMICG00000005835) MTAP (ENSMICG00000015072) KLHL9 (ENSMICG00000002688) ENSMICG00000014403 ##22 FOCAD (ENSMICG00000009888) MLLT3 (ENSMICG00000035047) ENSMICG00000036265 ENSMICG00000028503 SLC24A2 (ENSMICG00000034280) ##24 ACER2 (ENSMICG00000035197) ENSMICG00000007262 DENND4C (ENSMICG00000007242) PLIN2 (ENSMICG00000005214) HAUS6 (ENSMICG00000033370) RRAGA (ENSMICG00000016534) SAXO1 (ENSMICG00000047006) ADAMTSL1 (ENSMICG00000029970) SH3GL2 (ENSMICG00000009761) CNTLN (ENSMICG00000009738) Lemuriformes_a ANCESTRAL SPECIES 35 ENSGT00390000010786 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Coquerels sifaka MODERN SPECIES 1031 DMRTA1 (ENSPCOG00000021875) CDKN2B (ENSPCOG00000027261) CDKN2A (ENSPCOG00000025494) MTAP (ENSPCOG00000017099) IFNE (ENSPCOG00000015118) HACD4 (ENSPCOG00000028043) ##22 FOCAD (ENSPCOG00000017012) MLLT3 (ENSPCOG00000013614) SLC24A2 (ENSPCOG00000011721) ##24 ACER2 (ENSPCOG00000019863) ENSPCOG00000019415 DENND4C (ENSPCOG00000000944) PLIN2 (ENSPCOG00000027217) HAUS6 (ENSPCOG00000026237) RRAGA (ENSPCOG00000013740) SAXO1 (ENSPCOG00000021103) ADAMTSL1 (ENSPCOG00000018852) SH3GL2 (ENSPCOG00000027654) ENSPCOG00000028760 BNC2 (ENSPCOG00000021153) ENSPCOG00000025026 Greater bamboo lemur MODERN SPECIES 156 ENSPSMG00000005032 ENSPSMG00000005031 HACD4 (ENSPSMG00000005026) ##22 FOCAD (ENSPSMG00000004807) MLLT3 (ENSPSMG00000004470) SLC24A2 (ENSPSMG00000004439) ##24 ACER2 (ENSPSMG00000004337) ENSPSMG00000004301 DENND4C (ENSPSMG00000004221) PLIN2 (ENSPSMG00000004107) HAUS6 (ENSPSMG00000004052) RRAGA (ENSPSMG00000004027) SAXO1 (ENSPSMG00000004015) ADAMTSL1 (ENSPSMG00000003953) SH3GL2 (ENSPSMG00000003830) CNTLN (ENSPSMG00000003782) BNC2 (ENSPSMG00000003721) CCDC171 (ENSPSMG00000003682) Haplorrhini ANCESTRAL SPECIES 9 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Tarsier MODERN SPECIES 4490 ENSTSYG00000029577 HACD4 (ENSTSYG00000006852) ##22 ENSTSYG00000006797 Simiiformes ANCESTRAL SPECIES 11 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Platyrrhini ANCESTRAL SPECIES 8 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i.a ENSGT00390000008250 ENSGT00950000183031.B.e.b.c.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Cebidae ANCESTRAL SPECIES 7 ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.a.a.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i.a ENSGT00390000008250 ENSGT00950000183031.B.e.b.c.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00410000028916 Cebidae_a ANCESTRAL SPECIES 84 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.a.a.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i.a ENSGT00390000008250 ENSGT00950000183031.B.e.b.d ENSGT00950000183031.B.e.b.c.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Capuchin MODERN SPECIES 683 KLHL9 (ENSCCAG00000026796) ENSCCAG00000022267 HACD4 (ENSCCAG00000020547) ##22 FOCAD (ENSCCAG00000018687) Bolivian squirrel monkey MODERN SPECIES 69 NME7 (ENSSBOG00000034004) BLZF1 (ENSSBOG00000033672) CCDC181 (ENSSBOG00000036053) SLC19A2 (ENSSBOG00000022009) F5 (ENSSBOG00000020664) IZUMO3 (ENSSBOG00000031342) ELAVL2 (ENSSBOG00000028114) DMRTA1 (ENSSBOG00000020210) CDKN2B (ENSSBOG00000028011) CDKN2A (ENSSBOG00000030194) MTAP (ENSSBOG00000020187) ENSSBOG00000026349 KLHL9 (ENSSBOG00000030862) IFNA14 (ENSSBOG00000033464) ENSSBOG00000012028 HACD4 (ENSSBOG00000004033) ##22 FOCAD (ENSSBOG00000024709) MLLT3 (ENSSBOG00000029045) SLC24A2 (ENSSBOG00000027426) ##24 ACER2 (ENSSBOG00000032724) ENSSBOG00000018471 DENND4C (ENSSBOG00000033170) PLIN2 (ENSSBOG00000030779) HAUS6 (ENSSBOG00000026878) ENSSBOG00000031312 ENSSBOG00000008170 SAXO1 (ENSSBOG00000026964) ADAMTSL1 (ENSSBOG00000023299) ENSSBOG00000034943 SH3GL2 (ENSSBOG00000032645) CNTLN (ENSSBOG00000034763) Marmoset MODERN SPECIES ENSCJAG00000065871 ENSCJAG00000079951 DMRTA1 (ENSCJAG00000008059) ENSCJAG00000022751 ENSCJAG00000058382 CDKN2B (ENSCJAG00000008048) ENSCJAG00000051705 ENSCJAG00000008021 ENSCJAG00000060785 KLHL9 (ENSCJAG00000022401) ENSCJAG00000083249 ENSCJAG00000073023 ENSCJAG00000073103 ENSCJAG00000082610 IFNW1 (ENSCJAG00000044329) HACD4 (ENSCJAG00000008870) ##22 FOCAD (ENSCJAG00000008887) MLLT3 (ENSCJAG00000008994) ENSCJAG00000084318 SLC24A2 (ENSCJAG00000009047) ##24 ENSCJAG00000075791 ENSCJAG00000071852 ENSCJAG00000055111 ENSCJAG00000073088 ENSCJAG00000071823 ACER2 (ENSCJAG00000020617) ENSCJAG00000073393 ENSCJAG00000020612 DENND4C (ENSCJAG00000020600) ENSCJAG00000008088 ENSCJAG00000070670 Mas night monkey MODERN SPECIES 835 ENSANAG00000022457 ENSANAG00000022652 IZUMO3 (ENSANAG00000021921) ELAVL2 (ENSANAG00000032553) ENSANAG00000029023 DMRTA1 (ENSANAG00000021248) CDKN2B (ENSANAG00000018770) CDKN2A (ENSANAG00000025540) ENSANAG00000019784 MTAP (ENSANAG00000029387) IFNE (ENSANAG00000027745) KLHL9 (ENSANAG00000033732) ENSANAG00000031381 HACD4 (ENSANAG00000027847) ##22 FOCAD (ENSANAG00000029314) MLLT3 (ENSANAG00000032095) SLC24A2 (ENSANAG00000029933) ##24 ENSANAG00000025101 ACER2 (ENSANAG00000024432) DENND4C (ENSANAG00000025263) ENSANAG00000031170 ENSANAG00000034985 ENSANAG00000027699 ENSANAG00000031230 HAUS6 (ENSANAG00000026527) ENSANAG00000031746 SAXO1 (ENSANAG00000026710) ENSANAG00000021727 ADAMTSL1 (ENSANAG00000020228) Catarrhini ANCESTRAL SPECIES 13 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000153593.c.b.d.a ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Hominoidea ANCESTRAL SPECIES 23 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000153593.c.b.d.a ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Gibbon MODERN SPECIES 10 PTGR1 (ENSNLEG00000017487) DNAJC25 (ENSNLEG00000035715) ENSNLEG00000027862 CDKN2B (ENSNLEG00000035407) CDKN2A (ENSNLEG00000017493) MTAP (ENSNLEG00000017496) IFNE (ENSNLEG00000017501) ENSNLEG00000034867 IFNA8 (ENSNLEG00000030844) ENSNLEG00000033796 IFNA6 (ENSNLEG00000029201) KLHL9 (ENSNLEG00000019003) IFNA5 (ENSNLEG00000036196) IFNW1 (ENSNLEG00000018982) IFNB1 (ENSNLEG00000018983) HACD4 (ENSNLEG00000031309) ##22 FOCAD (ENSNLEG00000017507) MLLT3 (ENSNLEG00000017518) ENSNLEG00000031226 SLC24A2 (ENSNLEG00000017526) ##24 ENSNLEG00000033918 ENSNLEG00000029682 ACER2 (ENSNLEG00000017530) ENSNLEG00000017532 DENND4C (ENSNLEG00000017539) ENSNLEG00000031450 ENSNLEG00000027546 PLIN2 (ENSNLEG00000017545) HAUS6 (ENSNLEG00000017550) RRAGA (ENSNLEG00000018985) ENSNLEG00000035167 Hominidae ANCESTRAL SPECIES 10 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00390000009819.a.b.b.r.a ENSGT00390000009819.a.a ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b ENSGT00730000110920.b.a.b.bb ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00390000009819.a.b.b.r.a ENSGT00390000009819.a.a ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c Homo/Pan group ANCESTRAL SPECIES 27 ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.b ENSGT01000000214430.a.a.a.a.a.b.a.a.c ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.d.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.d.b ENSGT01000000214430.a.a.a.a.a.b.a.a.d.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b ENSGT00730000110920.b.a.b.bb ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Pan ANCESTRAL SPECIES 26 ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.a.b.a ENSGT01000000214430.a.a.a.a.a.b.b.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.b ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.d.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.a.c.a ENSGT01000000214430.a.a.a.a.a.b.a.a.d.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b ENSGT00730000110920.b.a.b.bb ENSGT00390000009819.a.b.a.a.b.a.j ENSGT00940000158215 ENSGT00390000009819.a.b.b.r.a ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 Chimpanzee MODERN SPECIES 22 CDKN2A (ENSPTRG00000020827) MTAP (ENSPTRG00000020825) IFNE (ENSPTRG00000020823) ENSPTRG00000043432 IFNA8 (ENSPTRG00000045477) IFNA2 (ENSPTRG00000020820) ENSPTRG00000050673 IFNA6 (ENSPTRG00000041238) KLHL9 (ENSPTRG00000022846) IFNA5 (ENSPTRG00000048038) IFNA14 (ENSPTRG00000044822) IFNA17 (ENSPTRG00000045595) IFNA21 (ENSPTRG00000048249) IFNW1 (ENSPTRG00000048978) IFNB1 (ENSPTRG00000020811) HACD4 (ENSPTRG00000052281) ##22 FOCAD (ENSPTRG00000020809) MLLT3 (ENSPTRG00000020808) SLC24A2 (ENSPTRG00000020806) ##24 ENSPTRG00000047361 ENSPTRG00000052125 ACER2 (ENSPTRG00000020804) RPS6 (ENSPTRG00000039153) DENND4C (ENSPTRG00000020802) ENSPTRG00000050726 PLIN2 (ENSPTRG00000020801) HAUS6 (ENSPTRG00000020800) RRAGA (ENSPTRG00000020798) ENSPTRG00000051867 SAXO1 (ENSPTRG00000020796) ENSPTRG00000050598 Bonobo MODERN SPECIES 22 MTAP (ENSPPAG00000038109) IFNE (ENSPPAG00000011111) ENSPPAG00000031511 IFNA8 (ENSPPAG00000011307) IFNA2 (ENSPPAG00000021138) ENSPPAG00000008684 IFNA6 (ENSPPAG00000008243) KLHL9 (ENSPPAG00000039116) IFNA5 (ENSPPAG00000009372) IFNA14 (ENSPPAG00000006950) IFNA17 (ENSPPAG00000005706) IFNA7 (ENSPPAG00000033124) IFNA10 (ENSPPAG00000009659) IFNA21 (ENSPPAG00000033360) IFNW1 (ENSPPAG00000024810) HACD4 (ENSPPAG00000038675) ##22 FOCAD (ENSPPAG00000033033) MLLT3 (ENSPPAG00000026839) SLC24A2 (ENSPPAG00000013510) ##24 ENSPPAG00000005138 ENSPPAG00000034594 ACER2 (ENSPPAG00000036613) RPS6 (ENSPPAG00000037670) DENND4C (ENSPPAG00000034704) ENSPPAG00000027144 PLIN2 (ENSPPAG00000010479) HAUS6 (ENSPPAG00000036089) RRAGA (ENSPPAG00000012463) ENSPPAG00000036876 SAXO1 (ENSPPAG00000031728) ENSPPAG00000024728 Human MODERN SPECIES 21 IFNA8 (ENSG00000120242) IFNA2 (ENSG00000188379) IFNA13 (ENSG00000233816) IFNA6 (ENSG00000120235) KLHL9 (ENSG00000198642) IFNA5 (ENSG00000147873) IFNA14 (ENSG00000228083) IFNA17 (ENSG00000234829) IFNA16 (ENSG00000147885) IFNA10 (ENSG00000186803) IFNA7 (ENSG00000214042) IFNA4 (ENSG00000236637) IFNA21 (ENSG00000137080) IFNW1 (ENSG00000177047) IFNB1 (ENSG00000171855) HACD4 (ENSG00000188921) ##22 FOCAD (ENSG00000188352) MLLT3 (ENSG00000171843) SLC24A2 (ENSG00000155886) ##24 ACER2 (ENSG00000177076) RPS6 (ENSG00000137154) DENND4C (ENSG00000137145) PLIN2 (ENSG00000147872) HAUS6 (ENSG00000147874) RRAGA (ENSG00000155876) SAXO1 (ENSG00000155875) ADAMTSL1 (ENSG00000178031) SH3GL2 (ENSG00000107295) CNTLN (ENSG00000044459) BNC2 (ENSG00000173068) CCDC171 (ENSG00000164989) Gorilla MODERN SPECIES 22 CAAP1 (ENSGGOG00000015329) TUSC1 (ENSGGOG00000004137) IZUMO3 (ENSGGOG00000011508) ELAVL2 (ENSGGOG00000003678) DMRTA1 (ENSGGOG00000009094) CDKN2B (ENSGGOG00000042843) CDKN2A (ENSGGOG00000024454) MTAP (ENSGGOG00000012929) IFNE (ENSGGOG00000015760) IFNA13 (ENSGGOG00000036801) IFNA2 (ENSGGOG00000026395) IFNA1 (ENSGGOG00000038600) KLHL9 (ENSGGOG00000023406) IFNW1 (ENSGGOG00000012076) IFNB1 (ENSGGOG00000025576) HACD4 (ENSGGOG00000016141) ##22 FOCAD (ENSGGOG00000008191) MLLT3 (ENSGGOG00000004505) SLC24A2 (ENSGGOG00000016544) ##24 ENSGGOG00000040005 ACER2 (ENSGGOG00000003851) RPS6 (ENSGGOG00000002652) DENND4C (ENSGGOG00000023295) ENSGGOG00000039679 PLIN2 (ENSGGOG00000016485) HAUS6 (ENSGGOG00000027530) RRAGA (ENSGGOG00000021937) SAXO1 (ENSGGOG00000024981) ENSGGOG00000037773 ADAMTSL1 (ENSGGOG00000010914) ENSGGOG00000040154 Orangutan MODERN SPECIES 22 ENSPPYG00000035735 IFNA8 (ENSPPYG00000033446) ENSPPYG00000035412 IFNA6 (ENSPPYG00000033933) IFNA5 (ENSPPYG00000032823) IFNA14 (ENSPPYG00000032470) ENSPPYG00000030191 ENSPPYG00000040684 ENSPPYG00000035433 IFNA16 (ENSPPYG00000031165) ENSPPYG00000030952 ENSPPYG00000041505 IFNA21 (ENSPPYG00000035236) IFNW1 (ENSPPYG00000019184) IFNB1 (ENSPPYG00000019185) HACD4 (ENSPPYG00000019186) ##22 FOCAD (ENSPPYG00000019187) MLLT3 (ENSPPYG00000019188) SLC24A2 (ENSPPYG00000019190) ##24 ACER2 (ENSPPYG00000019192) ENSPPYG00000019193 DENND4C (ENSPPYG00000019194) PLIN2 (ENSPPYG00000019195) ENSPPYG00000033603 HAUS6 (ENSPPYG00000036018) RRAGA (ENSPPYG00000019196) SAXO1 (ENSPPYG00000019197) ADAMTSL1 (ENSPPYG00000019199) SH3GL2 (ENSPPYG00000040517) CNTLN (ENSPPYG00000019201) BNC2 (ENSPPYG00000019203) Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000153593.c.b.d.a ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b.b.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j.n ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Rhinopithecus ANCESTRAL SPECIES 774 ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 Black snub-nosed monkey MODERN SPECIES 829 IFNB1 (ENSRBIG00000020848) HACD4 (ENSRBIG00000009212) ##22 FOCAD (ENSRBIG00000027028) MLLT3 (ENSRBIG00000043980) Golden snub-nosed monkey MODERN SPECIES 1749 ENSRROG00000033079 IFNB1 (ENSRROG00000002715) HACD4 (ENSRROG00000035716) ##22 Cercopithecinae ANCESTRAL SPECIES 12 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00390000017443.s.b ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b.b.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00390000017443.s.b ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00940000154158.k.b.b.b ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c Macaca ANCESTRAL SPECIES 10 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.a.a.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00390000017443.s.b ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a.j.n ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Pig-tailed macaque MODERN SPECIES 350 ENSMNEG00000030913 IFNB1 (ENSMNEG00000037943) HACD4 (ENSMNEG00000030794) ##22 FOCAD (ENSMNEG00000038816) MLLT3 (ENSMNEG00000038758) Macaca_a ANCESTRAL SPECIES 10 ENSGT00940000160640 ENSGT00940000162423 ENSGT00950000182991.B.yb.a ENSGT00940000156051.mc.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.a.d ENSGT01000000214430.a.a.a.a.a.b.b.b.a.h ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b.a ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT01100000263509.a.a.a.c.b.a ENSGT00390000004438 ENSGT00390000017443.s.b ENSGT00940000155903 ENSGT00940000163505.a.a.a.b.a.b.b.a.a.b.b.a.b.a.b.a.b.a.b.a.b.a.b.a.b.a ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j.n ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.i ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Crab-eating macaque MODERN SPECIES 6 ENSMFAG00000048577 ENSMFAG00000057421 ENSMFAG00000047167 IFNA8 (ENSMFAG00000053442) ENSMFAG00000052004 ENSMFAG00000049642 IFNA6 (ENSMFAG00000017071) KLHL9 (ENSMFAG00000061614) IFNA14 (ENSMFAG00000048461) ENSMFAG00000061198 ENSMFAG00000063486 ENSMFAG00000050022 ENSMFAG00000055488 IFNW1 (ENSMFAG00000048122) IFNB1 (ENSMFAG00000029241) HACD4 (ENSMFAG00000059691) ##22 ENSMFAG00000048615 FOCAD (ENSMFAG00000040075) ENSMFAG00000049166 MLLT3 (ENSMFAG00000036142) ENSMFAG00000049513 ENSMFAG00000051544 SLC24A2 (ENSMFAG00000031682) ##24 ENSMFAG00000061978 ENSMFAG00000051448 ACER2 (ENSMFAG00000003867) RPS6 (ENSMFAG00000044377) DENND4C (ENSMFAG00000030981) PLIN2 (ENSMFAG00000041970) HAUS6 (ENSMFAG00000000635) RRAGA (ENSMFAG00000030433) Rhesus MODERN SPECIES 6 CDKN2B (ENSMMUG00000001134) MTAP (ENSMMUG00000001137) ENSMMUG00000063104 IFNA13 (ENSMMUG00000051298) IFNA8 (ENSMMUG00000063809) ENSMMUG00000055493 IFNA6 (ENSMMUG00000054514) KLHL9 (ENSMMUG00000010959) IFNA14 (ENSMMUG00000058900) ENSMMUG00000052729 IFNA10 (ENSMMUG00000058565) ENSMMUG00000058435 IFNW1 (ENSMMUG00000058193) IFNB1 (ENSMMUG00000019067) FOCAD (ENSMMUG00000019070) HACD4 (ENSMMUG00000019068) ##22 ENSMMUG00000061078 ENSMMUG00000006895 MLLT3 (ENSMMUG00000008325) ENSMMUG00000052698 SLC24A2 (ENSMMUG00000020651) ##24 ACER2 (ENSMMUG00000045740) ENSMMUG00000003412 DENND4C (ENSMMUG00000004338) ENSMMUG00000060611 ENSMMUG00000058409 PLIN2 (ENSMMUG00000013997) HAUS6 (ENSMMUG00000018396) RRAGA (ENSMMUG00000018395) SAXO1 (ENSMMUG00000018394) ADAMTSL1 (ENSMMUG00000044658) Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00940000160640 ENSGT00940000153593.c.b.d.a ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B.yb.a ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.b.a.g ENSGT01000000214430.a.a.a.a.a.b.b.a.b.b ENSGT01000000214430.a.a.a.a.a.b.b.b.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.b.a.a ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.a.a.a.a.a.c ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j.n ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b.j.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Olive baboon MODERN SPECIES 4 DMRTA1 (ENSPANG00000029682) ENSPANG00000045037 ENSPANG00000048816 ENSPANG00000030138 MTAP (ENSPANG00000025242) ENSPANG00000045683 ENSPANG00000050899 IFNA8 (ENSPANG00000042591) IFNA6 (ENSPANG00000048129) ENSPANG00000045049 KLHL9 (ENSPANG00000025244) IFNA14 (ENSPANG00000041833) ENSPANG00000032030 IFNW1 (ENSPANG00000046967) IFNB1 (ENSPANG00000000084) HACD4 (ENSPANG00000025246) ##22 ENSPANG00000037458 FOCAD (ENSPANG00000025247) MLLT3 (ENSPANG00000025248) ENSPANG00000041722 ENSPANG00000048894 ENSPANG00000038349 ENSPANG00000025250 ##24 ENSPANG00000049665 HAUS6 (ENSPANG00000025239) RRAGA (ENSPANG00000000085) SAXO1 (ENSPANG00000025238) ENSPANG00000044854 ENSPANG00000031035 ENSPANG00000038651 ADAMTSL1 (ENSPANG00000025231) Cercopithecinae_d ANCESTRAL SPECIES 34 ENSGT01000000214430.a.a.a.a.a.b.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00910000146874 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a.j.n ENSGT00940000158215 ENSGT01100000263525.a.a.z ENSGT00950000182920.b.a.b.a.b.i.d ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT01020000230346.E.s.a ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 Drill MODERN SPECIES 150 HACD4 (ENSMLEG00000026224) ##22 FOCAD (ENSMLEG00000040934) Sooty mangabey MODERN SPECIES 629 ENSCATG00000038575 IFNB1 (ENSCATG00000019373) HACD4 (ENSCATG00000005629) ##22 FOCAD (ENSCATG00000042057) MLLT3 (ENSCATG00000003737) SLC24A2 (ENSCATG00000042548) ##24 ENSCATG00000016042 ENSCATG00000021155 ACER2 (ENSCATG00000038816) RPS6 (ENSCATG00000034999) DENND4C (ENSCATG00000032598) ENSCATG00000041930 ENSCATG00000040337 HAUS6 (ENSCATG00000009800) RRAGA (ENSCATG00000015913) SAXO1 (ENSCATG00000034966) ENSCATG00000030026 ADAMTSL1 (ENSCATG00000042482) Vervet Monkey MODERN SPECIES 3 CDKN2B (ENSCSAG00000009704) ENSCSAG00000009696 MTAP (ENSCSAG00000009686) IFNE (ENSCSAG00000009680) ENSCSAG00000000440 IFNA8 (ENSCSAG00000009673) IFNA2 (ENSCSAG00000009666) ENSCSAG00000000439 IFNA6 (ENSCSAG00000000438) IFNA14 (ENSCSAG00000000437) ENSCSAG00000000436 ENSCSAG00000000435 ENSCSAG00000000434 IFNW1 (ENSCSAG00000000433) IFNB1 (ENSCSAG00000000432) HACD4 (ENSCSAG00000009661) ##22 FOCAD (ENSCSAG00000009599) ENSCSAG00000018481 MLLT3 (ENSCSAG00000009472) SLC24A2 (ENSCSAG00000009459) ##24 ACER2 (ENSCSAG00000009413) ENSCSAG00000009408 DENND4C (ENSCSAG00000009390) PLIN2 (ENSCSAG00000009362) HAUS6 (ENSCSAG00000009348) SAXO1 (ENSCSAG00000009331) ADAMTSL1 (ENSCSAG00000009320) ENSCSAG00000018483 SH3GL2 (ENSCSAG00000009307) CNTLN (ENSCSAG00000009297) BNC2 (ENSCSAG00000009282) Euarchontoglires_A ANCESTRAL SPECIES 10 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Glires ANCESTRAL SPECIES 9 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Rodentia ANCESTRAL SPECIES 9 ENSGT00550000074944 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Rodentia_B ANCESTRAL SPECIES 6 ENSGT00550000074944 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Myomorpha ANCESTRAL SPECIES 1 ENSGT00550000074944 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Muroidea ANCESTRAL SPECIES 1 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.o ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.o ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Cricetidae ANCESTRAL SPECIES 2 ENSGT00390000007109 ENSGT00550000074944 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.o ENSGT00940000154359.e ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00390000010786 ENSGT00940000158840 ENSGT00940000161278 ENSGT00390000007109 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078 ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.o ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Northern American deer mouse MODERN SPECIES 11 ENSPEMG00000007998 Ifne (ENSPEMG00000029831) ENSPEMG00000026834 ENSPEMG00000024899 ENSPEMG00000027847 ENSPEMG00000027437 ENSPEMG00000030301 Klhl9 (ENSPEMG00000013714) ENSPEMG00000024802 ENSPEMG00000030502 ENSPEMG00000025225 ENSPEMG00000030406 ENSPEMG00000026355 ENSPEMG00000029651 Ifnb1 (ENSPEMG00000025091) Hacd4 (ENSPEMG00000016283) ##22 ENSPEMG00000013210 Focad (ENSPEMG00000000124) ENSPEMG00000008739 ENSPEMG00000029974 Slc24a2 (ENSPEMG00000019954) ##24 Acer2 (ENSPEMG00000020047) ENSPEMG00000020062 Dennd4c (ENSPEMG00000020187) Plin2 (ENSPEMG00000020242) Haus6 (ENSPEMG00000028376) Rraga (ENSPEMG00000012776) Saxo1 (ENSPEMG00000000040) Adamtsl1 (ENSPEMG00000005320) Sh3gl2 (ENSPEMG00000010691) ENSPEMG00000012875 Prairie vole MODERN SPECIES 1 ENSMOCG00000004079 Dmrta1 (ENSMOCG00000002337) Cdkn2b (ENSMOCG00000015669) ENSMOCG00000013892 Mtap (ENSMOCG00000012400) ENSMOCG00000003644 ENSMOCG00000004406 ENSMOCG00000003427 ENSMOCG00000004176 Klhl9 (ENSMOCG00000003966) ENSMOCG00000022936 ENSMOCG00000002912 ENSMOCG00000003333 ENSMOCG00000003596 ENSMOCG00000007135 Hacd4 (ENSMOCG00000009794) ##22 Focad (ENSMOCG00000016725) Mllt3 (ENSMOCG00000011295) Slc24a2 (ENSMOCG00000021376) ##24 Acer2 (ENSMOCG00000006649) Rps6 (ENSMOCG00000004590) Dennd4c (ENSMOCG00000001944) ENSMOCG00000014772 ENSMOCG00000023023 Saxo1 (ENSMOCG00000016102) Adamtsl1 (ENSMOCG00000000817) Sh3gl2 (ENSMOCG00000022289) Cntln (ENSMOCG00000019830) ENSMOCG00000008451 Bnc2 (ENSMOCG00000015132) Ccdc171 (ENSMOCG00000016262) Cricetinae ANCESTRAL SPECIES 21 ENSGT01000000214430.a.a.a.a.a.b.o.f.a ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.o.e ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.b.r.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00940000169234 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Chinese hamster chok1gshd MODERN SPECIES 111 ENSCGRG00001006253 ENSCGRG00001009477 ENSCGRG00001009627 ENSCGRG00001005704 ENSCGRG00001006765 ENSCGRG00001006905 ENSCGRG00001007554 ENSCGRG00001015592 ENSCGRG00001019024 ENSCGRG00001002533 ENSCGRG00001003121 ENSCGRG00001002928 ENSCGRG00001003697 ENSCGRG00001001577 Ifnb1 (ENSCGRG00001002042) Hacd4 (ENSCGRG00001014653) ##22 Focad (ENSCGRG00001019342) Mllt3 (ENSCGRG00001021349) ENSCGRG00001017031 ENSCGRG00001002729 Slc24a2 (ENSCGRG00001020424) ##24 Acer2 (ENSCGRG00001023025) ENSCGRG00001022215 ENSCGRG00001022609 Dennd4c (ENSCGRG00001004609) Plin2 (ENSCGRG00001016267) Saxo1 (ENSCGRG00001017278) Adamtsl1 (ENSCGRG00001004761) Sh3gl2 (ENSCGRG00001022450) Cntln (ENSCGRG00001005303) ENSCGRG00001006130 Golden Hamster MODERN SPECIES 662 Mysm1 (ENSMAUG00000014841) Eqtn (ENSMAUG00000015891) Tek (ENSMAUG00000018555) ENSMAUG00000006577 Ift74 (ENSMAUG00000001215) Plaa (ENSMAUG00000013719) ENSMAUG00000014308 Tusc1 (ENSMAUG00000020941) Izumo3 (ENSMAUG00000014991) Elavl2 (ENSMAUG00000011955) Dmrta1 (ENSMAUG00000004332) Cdkn2b (ENSMAUG00000019635) Cdkn2a (ENSMAUG00000003307) Mtap (ENSMAUG00000010309) ENSMAUG00000004733 Hacd4 (ENSMAUG00000000488) ##22 Focad (ENSMAUG00000012306) Mllt3 (ENSMAUG00000021318) Slc24a2 (ENSMAUG00000016398) ##24 Acer2 (ENSMAUG00000020667) ENSMAUG00000016545 Dennd4c (ENSMAUG00000002052) ENSMAUG00000020314 Rraga (ENSMAUG00000003702) Saxo1 (ENSMAUG00000004358) Adamtsl1 (ENSMAUG00000018361) Murinae ANCESTRAL SPECIES 2 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.p.b ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Mus ANCESTRAL SPECIES 3 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000168083 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Mus_A ANCESTRAL SPECIES 3 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000168083 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00860000135766 ENSGT01000000214430.a.a.a.a.a.b.p.a.a.b.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Ryukyu mouse MODERN SPECIES 13 Mtap (MGP_CAROLIEiJ_G0026155) Ifne (MGP_CAROLIEiJ_G0026154) MGP_CAROLIEiJ_G0026153 MGP_CAROLIEiJ_G0026152 MGP_CAROLIEiJ_G0026151 Klhl9 (MGP_CAROLIEiJ_G0026150) MGP_CAROLIEiJ_G0026149 MGP_CAROLIEiJ_G0026148 MGP_CAROLIEiJ_G0026147 MGP_CAROLIEiJ_G0026146 Pramel32 (MGP_CAROLIEiJ_G0026145) MGP_CAROLIEiJ_G0026144 MGP_CAROLIEiJ_G0026143 Ifna12 (MGP_CAROLIEiJ_G0026142) Ifnb1 (MGP_CAROLIEiJ_G0026141) Hacd4 (MGP_CAROLIEiJ_G0026140) ##22 Focad (MGP_CAROLIEiJ_G0026139) Mllt3 (MGP_CAROLIEiJ_G0026138) Slc24a2 (MGP_CAROLIEiJ_G0026137) ##24 Acer2 (MGP_CAROLIEiJ_G0026136) MGP_CAROLIEiJ_G0026135 Dennd4c (MGP_CAROLIEiJ_G0026134) Plin2 (MGP_CAROLIEiJ_G0026133) MGP_CAROLIEiJ_G0026132 Rraga (MGP_CAROLIEiJ_G0026131) Saxo1 (MGP_CAROLIEiJ_G0026130) Adamtsl1 (MGP_CAROLIEiJ_G0026129) Sh3gl2 (MGP_CAROLIEiJ_G0026128) Cntln (MGP_CAROLIEiJ_G0026127) Bnc2 (MGP_CAROLIEiJ_G0026126) Ccdc171 (MGP_CAROLIEiJ_G0026125) Mus_B ANCESTRAL SPECIES 5 ENSGT00940000156823.e ENSGT00940000164376.c ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000168083 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00860000135766 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.b.p.a.b.a ENSGT01000000214430.a.a.a.a.a.b.p.a.a.b.a.a ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.b.p.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Mouse MODERN SPECIES 13 Gm13289 (ENSMUSG00000096582) Gm13290 (ENSMUSG00000094271) Gm13283 (ENSMUSG00000100505) Gm13271 (ENSMUSG00000094618) Klhl9 (ENSMUSG00000070923) Ifnab (ENSMUSG00000100079) Ifna2 (ENSMUSG00000078354) Ifna16 (ENSMUSG00000078355) Ifna13 (ENSMUSG00000063376) Pramel32 (ENSMUSG00000038330) Ifna12 (ENSMUSG00000073811) Ifna9 (ENSMUSG00000095270) Ifna14 (ENSMUSG00000095896) Ifna15 (ENSMUSG00000096011) Ifnb1 (ENSMUSG00000048806) Hacd4 (ENSMUSG00000028497) ##22 Focad (ENSMUSG00000038368) Mllt3 (ENSMUSG00000028496) Slc24a2 (ENSMUSG00000037996) ##24 Acer2 (ENSMUSG00000038007) Rps6 (ENSMUSG00000028495) Dennd4c (ENSMUSG00000038024) Plin2 (ENSMUSG00000028494) Haus6 (ENSMUSG00000038047) Rraga (ENSMUSG00000070934) Saxo1 (ENSMUSG00000028492) Adamtsl1 (ENSMUSG00000066113) Sh3gl2 (ENSMUSG00000028488) Cntln (ENSMUSG00000038070) Bnc2 (ENSMUSG00000028487) Ccdc171 (ENSMUSG00000052407) Mus_C ANCESTRAL SPECIES 2 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000164376.c ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000168083 ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT00860000135766 ENSGT01030000234531.A.b.b.b.e.a.a.a.a.a.b.b ENSGT01000000214430.a.a.a.a.a.b.p.a.b.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 spretus MODERN SPECIES 13 Cdkn2a (MGP_SPRETEiJ_G0027120) Mtap (MGP_SPRETEiJ_G0027119) Ifne (MGP_SPRETEiJ_G0027118) MGP_SPRETEiJ_G0027117 MGP_SPRETEiJ_G0027116 MGP_SPRETEiJ_G0027115 MGP_SPRETEiJ_G0027114 Klhl9 (MGP_SPRETEiJ_G0027113) MGP_SPRETEiJ_G0027112 MGP_SPRETEiJ_G0027111 MGP_SPRETEiJ_G0027110 MGP_SPRETEiJ_G0027109 Pramel32 (MGP_SPRETEiJ_G0027108) MGP_SPRETEiJ_G0027107 Ifnb1 (MGP_SPRETEiJ_G0027106) Hacd4 (MGP_SPRETEiJ_G0027105) ##22 Focad (MGP_SPRETEiJ_G0027104) Mllt3 (MGP_SPRETEiJ_G0027103) Slc24a2 (MGP_SPRETEiJ_G0027102) ##24 Acer2 (MGP_SPRETEiJ_G0027101) Rps6 (MGP_SPRETEiJ_G0027100) Dennd4c (MGP_SPRETEiJ_G0027099) Plin2 (MGP_SPRETEiJ_G0027098) Haus6 (MGP_SPRETEiJ_G0027097) Rraga (MGP_SPRETEiJ_G0027096) Saxo1 (MGP_SPRETEiJ_G0027095) Adamtsl1 (MGP_SPRETEiJ_G0027094) MGP_SPRETEiJ_G0027093 Cntln (MGP_SPRETEiJ_G0027092) Bnc2 (MGP_SPRETEiJ_G0027091) Ccdc171 (MGP_SPRETEiJ_G0027090) Steppe mouse MODERN SPECIES 2820 Ifnb1 (ENSMSIG00000021867) Hacd4 (ENSMSIG00000021876) ##22 Focad (ENSMSIG00000021916) Mllt3 (ENSMSIG00000022183) Shrew mouse MODERN SPECIES 19 Cdkn2a (MGP_PahariEiJ_G0028493) Mtap (MGP_PahariEiJ_G0028492) Ifne (MGP_PahariEiJ_G0028491) MGP_PahariEiJ_G0028490 MGP_PahariEiJ_G0028488 MGP_PahariEiJ_G0028489 MGP_PahariEiJ_G0028487 MGP_PahariEiJ_G0028486 Klhl9 (MGP_PahariEiJ_G0028485) MGP_PahariEiJ_G0028483 MGP_PahariEiJ_G0028484 MGP_PahariEiJ_G0028482 MGP_PahariEiJ_G0028481 MGP_PahariEiJ_G0028480 Ifnb1 (MGP_PahariEiJ_G0028479) MGP_PahariEiJ_G0028478 ##22 Focad (MGP_PahariEiJ_G0028477) Mllt3 (MGP_PahariEiJ_G0028476) Slc24a2 (MGP_PahariEiJ_G0028475) ##24 Acer2 (MGP_PahariEiJ_G0028474) MGP_PahariEiJ_G0028473 Dennd4c (MGP_PahariEiJ_G0028472) Plin2 (MGP_PahariEiJ_G0028471) Haus6 (MGP_PahariEiJ_G0028470) Rraga (MGP_PahariEiJ_G0028469) Saxo1 (MGP_PahariEiJ_G0028468) Adamtsl1 (MGP_PahariEiJ_G0028467) MGP_PahariEiJ_G0028466 Cntln (MGP_PahariEiJ_G0028465) Bnc2 (MGP_PahariEiJ_G0028464) Ccdc171 (MGP_PahariEiJ_G0028463) Rat MODERN SPECIES 15 LOC100362345 (ENSRNOG00000024197) Ifne (ENSRNOG00000024204) LOC100911527 (ENSRNOG00000065328) LOC120103164 (ENSRNOG00000070321) LOC120103163 (ENSRNOG00000066857) RGD1560539 (ENSRNOG00000066962) LOC120103162 (ENSRNOG00000065583) LOC120103161 (ENSRNOG00000063625) LOC120103160 (ENSRNOG00000063583) LOC120103159 (ENSRNOG00000069770) LOC120103158 (ENSRNOG00000064351) ENSRNOG00000065554 Ifna1 (ENSRNOG00000068703) Ifna4 (ENSRNOG00000063201) Ifnb1 (ENSRNOG00000006268) Hacd4 (ENSRNOG00000005772) ##22 Focad (ENSRNOG00000024402) Mllt3 (ENSRNOG00000011280) Slc24a2 (ENSRNOG00000008169) ##24 Acer2 (ENSRNOG00000007637) Rps6 (ENSRNOG00000007663) Dennd4c (ENSRNOG00000008036) Plin2 (ENSRNOG00000007060) Haus6 (ENSRNOG00000046028) Rraga (ENSRNOG00000007051) Saxo1 (ENSRNOG00000048197) Adamtsl1 (ENSRNOG00000006956) Sh3gl2 (ENSRNOG00000006761) Cntln (ENSRNOG00000043151) Bnc2 (ENSRNOG00000006553) LOC120102904 (ENSRNOG00000067108) Upper Galilee mountains blind mole rat MODERN SPECIES 1299 Ifnb1 (ENSNGAG00000018797) Hacd4 (ENSNGAG00000022599) ##22 Focad (ENSNGAG00000014774) Mllt3 (ENSNGAG00000011123) ENSNGAG00000006130 Slc24a2 (ENSNGAG00000014040) ##24 ENSNGAG00000022308 Acer2 (ENSNGAG00000017022) Rps6 (ENSNGAG00000018864) Dennd4c (ENSNGAG00000013102) Plin2 (ENSNGAG00000013288) Haus6 (ENSNGAG00000019193) Rraga (ENSNGAG00000007602) Saxo1 (ENSNGAG00000022334) ENSNGAG00000022954 ENSNGAG00000019233 Lesser Egyptian jerboa MODERN SPECIES 66 Plaa (ENSJJAG00000013453) Caap1 (ENSJJAG00000012208) ENSJJAG00000019508 ENSJJAG00000011332 Izumo3 (ENSJJAG00000017341) Elavl2 (ENSJJAG00000008247) ENSJJAG00000021773 Dmrta1 (ENSJJAG00000015837) ENSJJAG00000009725 ENSJJAG00000009128 Cdkn2b (ENSJJAG00000021247) ENSJJAG00000017320 ENSJJAG00000010173 Klhl9 (ENSJJAG00000007691) ENSJJAG00000024178 Hacd4 (ENSJJAG00000024303) ##22 Focad (ENSJJAG00000024309) Mllt3 (ENSJJAG00000012196) ENSJJAG00000018542 Slc24a2 (ENSJJAG00000020852) ##24 Acer2 (ENSJJAG00000020889) ENSJJAG00000011871 Dennd4c (ENSJJAG00000022774) Plin2 (ENSJJAG00000014665) Haus6 (ENSJJAG00000020343) Rraga (ENSJJAG00000008212) ENSJJAG00000015289 ENSJJAG00000016096 ENSJJAG00000014571 ENSJJAG00000010272 ENSJJAG00000024102 Kangaroo rat MODERN SPECIES 372 ENSDORG00000010654 Tek (ENSDORG00000010652) Lrrc19 (ENSDORG00000008965) Ift74 (ENSDORG00000008963) Plaa (ENSDORG00000002789) Caap1 (ENSDORG00000025530) Tusc1 (ENSDORG00000029686) ENSDORG00000005292 Izumo3 (ENSDORG00000027519) Elavl2 (ENSDORG00000010437) Dmrta1 (ENSDORG00000015411) Cdkn2b (ENSDORG00000012076) ENSDORG00000012075 Mtap (ENSDORG00000012074) Klhl9 (ENSDORG00000028408) Hacd4 (ENSDORG00000006925) ##22 Focad (ENSDORG00000006921) ENSDORG00000028514 ENSDORG00000027266 Slc24a2 (ENSDORG00000015412) ##24 Acer2 (ENSDORG00000002403) ENSDORG00000012057 Dennd4c (ENSDORG00000012055) ENSDORG00000014197 Haus6 (ENSDORG00000026577) Saxo1 (ENSDORG00000026559) ENSDORG00000025399 ENSDORG00000024977 ENSDORG00000027313 Sh3gl2 (ENSDORG00000000622) ENSDORG00000028767 Rodentia_A ANCESTRAL SPECIES 11 ENSGT00940000158840 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00860000136187 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000167452 ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b Hystricomorpha ANCESTRAL SPECIES 46 ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243.jb ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Naked mole-rat female MODERN SPECIES 3 ENSHGLG00000004959 ENSHGLG00000037708 ENSHGLG00000006210 ENSHGLG00000044890 ENSHGLG00000007302 ENSHGLG00000003036 ENSHGLG00000005687 ENSHGLG00000019003 ENSHGLG00000006265 ENSHGLG00000018870 ENSHGLG00000006983 ENSHGLG00000020691 ENSHGLG00000020519 ENSHGLG00000040693 ENSHGLG00000009375 PTPLAD2 (ENSHGLG00000015090) ##22 FOCAD (ENSHGLG00000010449) ENSHGLG00000017554 ENSHGLG00000042372 ENSHGLG00000039414 MLLT3 (ENSHGLG00000010560) ENSHGLG00000035978 SLC24A2 (ENSHGLG00000013244) ##24 ENSHGLG00000007103 ACER2 (ENSHGLG00000042194) RPS6 (ENSHGLG00000048620) DENND4C (ENSHGLG00000007572) PLIN2 (ENSHGLG00000049693) HAUS6 (ENSHGLG00000015943) RRAGA (ENSHGLG00000037556) SAXO1 (ENSHGLG00000011651) Hystricomorpha_a ANCESTRAL SPECIES 53 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243.jb ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Guinea pig MODERN SPECIES 21 ENSCPOG00000032595 ENSCPOG00000009732 ENSCPOG00000026970 ENSCPOG00000008049 HACD4 (ENSCPOG00000013883) ##22 FOCAD (ENSCPOG00000013874) ENSCPOG00000026839 SLC24A2 (ENSCPOG00000010006) ##24 ACER2 (ENSCPOG00000003256) ENSCPOG00000003750 DENND4C (ENSCPOG00000003743) ENSCPOG00000011958 ENSCPOG00000025832 HAUS6 (ENSCPOG00000008053) RRAGA (ENSCPOG00000008047) ENSCPOG00000031962 ADAMTSL1 (ENSCPOG00000003783) SH3GL2 (ENSCPOG00000015380) ENSCPOG00000032617 BNC2 (ENSCPOG00000006163) Hystricomorpha_b ANCESTRAL SPECIES 71 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243.jb ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Long-tailed chinchilla MODERN SPECIES 141 ENSCLAG00000011967 HACD4 (ENSCLAG00000008037) ##22 ENSCLAG00000007141 FOCAD (ENSCLAG00000012468) ENSCLAG00000011270 SLC24A2 (ENSCLAG00000008199) ##24 ACER2 (ENSCLAG00000010907) ENSCLAG00000009131 DENND4C (ENSCLAG00000007655) PLIN2 (ENSCLAG00000006627) HAUS6 (ENSCLAG00000015951) RRAGA (ENSCLAG00000017884) SAXO1 (ENSCLAG00000015777) ADAMTSL1 (ENSCLAG00000016263) SH3GL2 (ENSCLAG00000012375) ENSCLAG00000010823 BNC2 (ENSCLAG00000009846) Degu MODERN SPECIES 85 ENSODEG00000020288 HACD4 (ENSODEG00000014342) ##22 ENSODEG00000020253 FOCAD (ENSODEG00000015002) ENSODEG00000014558 MLLT3 (ENSODEG00000016615) ENSODEG00000015587 SLC24A2 (ENSODEG00000016346) ##24 ACER2 (ENSODEG00000014450) ENSODEG00000014595 ENSODEG00000020327 DENND4C (ENSODEG00000014636) PLIN2 (ENSODEG00000014348) HAUS6 (ENSODEG00000014005) ENSODEG00000020152 RRAGA (ENSODEG00000020270) ENSODEG00000020135 Sciuridae ANCESTRAL SPECIES 6 ENSGT00390000007109 ENSGT00940000161278 ENSGT00550000074944 ENSGT00390000017010 ENSGT00390000013920 ENSGT00390000017601 ENSGT00940000156823.e ENSGT00940000160640 ENSGT00940000162423 ENSGT00940000163078.g ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b ENSGT00940000154359.e ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Marmotini ANCESTRAL SPECIES 1 ENSGT00940000162423 ENSGT00940000165099 ENSGT00940000163078.g ENSGT00950000182991.B ENSGT01000000214430.a.a.b ENSGT01000000214430.a.a.a.a.a.b.n.b.a.b ENSGT01000000214430.a.b.f.a.a ENSGT01000000214430.a.a.a.a.a.b.n.b.a.a ENSGT01000000214430.a.a.a.a.a.b.m.b ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.n.a.a ENSGT01000000214430.a.a.a.a.a.b.n.b.b ENSGT01000000214430.a.b.f.a.b ENSGT01000000214430.a.a.a.a.a.b.m.a ENSGT01000000214430.a.b.e ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Marmotini_b ANCESTRAL SPECIES 118 ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b.n.a.a ENSGT01000000214430.a.a.a.a.a.b.n.b.b ENSGT01000000214430.a.b.f.a.b ENSGT01000000214430.a.a.a.a.a.b.m.a ENSGT01000000214430.a.b.e ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Arctic ground squirrel MODERN SPECIES 187 KLHL9 (ENSUPAG00010019252) ENSUPAG00010019251 ENSUPAG00010019248 ENSUPAG00010019234 HACD4 (ENSUPAG00010019228) ##22 FOCAD (ENSUPAG00010019097) MLLT3 (ENSUPAG00010019064) SLC24A2 (ENSUPAG00010019009) ##24 ACER2 (ENSUPAG00010018988) RPS6 (ENSUPAG00010018950) DENND4C (ENSUPAG00010018795) PLIN2 (ENSUPAG00010018783) HAUS6 (ENSUPAG00010018761) RRAGA (ENSUPAG00010018757) SAXO1 (ENSUPAG00010018753) ADAMTSL1 (ENSUPAG00010018667) SH3GL2 (ENSUPAG00010018638) ENSUPAG00010018623 ENSUPAG00010018596 Squirrel MODERN SPECIES 252 DMRTA1 (ENSSTOG00000022459) CDKN2B (ENSSTOG00000008721) MTAP (ENSSTOG00000014404) IFNE (ENSSTOG00000024739) ENSSTOG00000019950 ENSSTOG00000021564 ENSSTOG00000033711 ENSSTOG00000027803 ENSSTOG00000033477 ENSSTOG00000021945 HACD4 (ENSSTOG00000015776) ##22 FOCAD (ENSSTOG00000015742) MLLT3 (ENSSTOG00000027195) SLC24A2 (ENSSTOG00000028358) ##24 ACER2 (ENSSTOG00000022847) ENSSTOG00000024906 DENND4C (ENSSTOG00000025059) PLIN2 (ENSSTOG00000008029) HAUS6 (ENSSTOG00000023239) ADAMTSL1 (ENSSTOG00000019570) Alpin marmot MODERN SPECIES 83 ENSMMMG00000005933 ENSMMMG00000005938 ENSMMMG00000005951 ENSMMMG00000005961 ENSMMMG00000005963 ENSMMMG00000005974 KLHL9 (ENSMMMG00000005981) ENSMMMG00000005986 ENSMMMG00000005991 ENSMMMG00000005999 ENSMMMG00000006004 HACD4 (ENSMMMG00000006012) ##22 FOCAD (ENSMMMG00000006025) ENSMMMG00000006205 ENSMMMG00000006210 SLC24A2 (ENSMMMG00000006283) ##24 ACER2 (ENSMMMG00000006333) ENSMMMG00000006347 DENND4C (ENSMMMG00000006441) PLIN2 (ENSMMMG00000006611) HAUS6 (ENSMMMG00000006628) ENSMMMG00000006686 RRAGA (ENSMMMG00000006689) SAXO1 (ENSMMMG00000006694) ENSMMMG00000006707 ADAMTSL1 (ENSMMMG00000006719) ENSMMMG00000006805 Eurasian red squirrel MODERN SPECIES 6 ENSSVLG00005023243 ENSSVLG00005023234 ENSSVLG00005023225 ENSSVLG00005023217 ENSSVLG00005023193 ENSSVLG00005023180 ENSSVLG00005023171 ENSSVLG00005023116 ENSSVLG00005023100 ENSSVLG00005023088 ENSSVLG00005023075 KLHL9 (ENSSVLG00005023061) ENSSVLG00005023046 ENSSVLG00005022997 ENSSVLG00005022981 HACD4 (ENSSVLG00005022946) ##22 ENSSVLG00005022926 ENSSVLG00005022902 ENSSVLG00005022890 FOCAD (ENSSVLG00005022842) ENSSVLG00005022732 SLC24A2 (ENSSVLG00005022584) ##24 ACER2 (ENSSVLG00005022509) RPS6 (ENSSVLG00005022424) DENND4C (ENSSVLG00005022373) PLIN2 (ENSSVLG00005022244) HAUS6 (ENSSVLG00005022104) RRAGA (ENSSVLG00005022081) SAXO1 (ENSSVLG00005021951) ADAMTSL1 (ENSSVLG00005021790) ENSSVLG00005021741 Lagomorpha ANCESTRAL SPECIES 68 ENSGT00940000154359.e ENSGT01000000214430.a.a.a.a.a.b ENSGT01000000214430.a.a.a.a.a.a ENSGT01000000214430.a.b ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.b.a.a.b.a ENSGT00940000158215 ENSGT00950000182920.b.a.b.a.b ENSGT00390000008250 ENSGT00950000183031.B.e.b ENSGT00390000007252.c ENSGT00940000156243 ENSGT00940000160529 ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 Pika MODERN SPECIES 3407 ENSOPRG00000006271 HACD4 (ENSOPRG00000006260) ##22 FOCAD (ENSOPRG00000006223) MLLT3 (ENSOPRG00000006206) Rabbit MODERN SPECIES ENSOCUG00000036321 ENSOCUG00000028068 ENSOCUG00000021714 ENSOCUG00000027561 KLHL9 (ENSOCUG00000008548) ENSOCUG00000031005 ENSOCUG00000036366 ENSOCUG00000023654 ENSOCUG00000031030 ENSOCUG00000022525 ENSOCUG00000035691 ENSOCUG00000033635 ENSOCUG00000020925 ENSOCUG00000023921 IFNB1 (ENSOCUG00000021649) HACD4 (ENSOCUG00000029669) ##22 FOCAD (ENSOCUG00000006192) ENSOCUG00000032941 MLLT3 (ENSOCUG00000008137) SLC24A2 (ENSOCUG00000002462) ##24 ACER2 (ENSOCUG00000012439) ENSOCUG00000025352 ENSOCUG00000003336 DENND4C (ENSOCUG00000003320) PLIN2 (ENSOCUG00000012244) HAUS6 (ENSOCUG00000003507) RRAGA (ENSOCUG00000003506) SAXO1 (ENSOCUG00000012362) ADAMTSL1 (ENSOCUG00000004895) SH3GL2 (ENSOCUG00000001183) CNTLN (ENSOCUG00000002551) Platypus MODERN SPECIES 85 DNAH1 (ENSOANG00000041553) GLYCTK (ENSOANG00000013690) WDR82 (ENSOANG00000013610) TXNRD3 (ENSOANG00000011540) CHST13 (ENSOANG00000004469) SLC41A3 (ENSOANG00000044926) NPRL2 (ENSOANG00000010419) CYB561D2 (ENSOANG00000048587) TMEM115 (ENSOANG00000015999) CACNA2D2 (ENSOANG00000010417) C3orf18 (ENSOANG00000043605) HEMK1 (ENSOANG00000038312) CISH (ENSOANG00000050328) ifn6 (ENSOANG00000045969) ifn5 (ENSOANG00000005960) HACD4 (ENSOANG00000045166) ##22 FOCAD (ENSOANG00000007465) MLLT3 (ENSOANG00000010155) PDCD6 (ENSOANG00000010156) CCDC127 (ENSOANG00000042977) SDHA (ENSOANG00000010157) ELP2 (ENSOANG00000010161) ENSOANG00000010162 ABITRAM (ENSOANG00000010167) ENSOANG00000010168 CAVIN4 (ENSOANG00000010169) ENSOANG00000010170 ENSOANG00000010173 LRRC14B (ENSOANG00000010172) SERPINB10 (ENSOANG00000047007) SERPINB2 (ENSOANG00000047223) Anura ANCESTRAL SPECIES 210 ENSGT00530000062962.b.b ##22 ENSGT00390000004438 ENSGT00940000155903 ENSGT01030000234532.B.e.a ##24 ENSGT00730000110920.b.a.b ENSGT00390000009819.a.a ENSGT00940000158215 ENSGT00390000008250 ENSGT00940000156243 ENSGT00940000154737.d ENSGT00440000034932 ENSGT00390000005844.a.b ENSGT00390000007924 ENSGT00940000157772 ENSGT00940000153173.a Leishan spiny toad MODERN SPECIES CDKN2A (ENSLLEG00000000609) ENSLLEG00000000656 ENSLLEG00000000745 KLF4 (ENSLLEG00000000747) RAD23B (ENSLLEG00000000766) ZNF462 (ENSLLEG00000000859) ENSLLEG00000000903 ENSLLEG00000000907 TMEM38B (ENSLLEG00000000920) TAL2 (ENSLLEG00000000957) FKTN (ENSLLEG00000000973) FSD1L (ENSLLEG00000001015) ENSLLEG00000001096 SLC44A1 (ENSLLEG00000001121) ENSLLEG00000001258 HACD4 (ENSLLEG00000001275) ##22 ENSLLEG00000001290 ENSLLEG00000001349 MLLT3 (ENSLLEG00000001600) ENSLLEG00000001631 SLC24A2 (ENSLLEG00000001674) ##24 ACER2 (ENSLLEG00000001768) ENSLLEG00000001794 DENND4C (ENSLLEG00000001827) ENSLLEG00000001904 ENSLLEG00000001918 ENSLLEG00000001932 ENSLLEG00000001954 ABCA1 (ENSLLEG00000002068) ENSLLEG00000002539 HAUS6 (ENSLLEG00000002564) Frog MODERN SPECIES dmrta1 (ENSXETG00000005462) cdkn2b (ENSXETG00000005465) mtap (ENSXETG00000005467) ENSXETG00000049369 klf4 (ENSXETG00000005739) rad23b (ENSXETG00000005751) znf462 (ENSXETG00000005759) tmem38b (ENSXETG00000000907) TAL2 (ENSXETG00000045275) fktn (ENSXETG00000000916) fsd1l (ENSXETG00000000909) slc44a1 (ENSXETG00000000925) abca1 (ENSXETG00000000951) nipsnap3a (ENSXETG00000000998) ENSXETG00000039539 hacd4 (ENSXETG00000040140) ##22 focad (ENSXETG00000015484) ENSXETG00000049153 mllt3 (ENSXETG00000015500) ENSXETG00000045971 slc24a2 (ENSXETG00000023099) ##24 acer2 (ENSXETG00000024487) ENSXETG00000038909 rps6 (ENSXETG00000023100) opn3 (ENSXETG00000033066) plin2 (ENSXETG00000023101) dennd4c (ENSXETG00000023104) haus6 (ENSXETG00000024486) ENSXETG00000041813 adamtsl1 (ENSXETG00000023109) sh3gl2 (ENSXETG00000039551) Elephant shark MODERN SPECIES 1560 LRRC2 (ENSCMIG00000011617) sass6 (ENSCMIG00000011622) ENSCMIG00000011655 SPIN2B (ENSCMIG00000011739) nxnl2 (ENSCMIG00000011740) ENSCMIG00000011744 S1PR3 (ENSCMIG00000011753) ENSCMIG00000011754 ENSCMIG00000011757 zgc:86839 (ENSCMIG00000011760) ENSCMIG00000011768 SEMA4D (ENSCMIG00000011779) ENSCMIG00000011794 ENSCMIG00000011795 mtap (ENSCMIG00000011797) HACD4 (ENSCMIG00000011800) ##22 FOCAD (ENSCMIG00000011894) MLLT3 (ENSCMIG00000012175) ENSCMIG00000012176 ##24 ACER2 (ENSCMIG00000012183) rps6 (ENSCMIG00000012192) DENND4C (ENSCMIG00000012237) ENSCMIG00000012266 DMRTA1 (ENSCMIG00000012267) gadd45gb.1 (ENSCMIG00000012272) gng7 (ENSCMIG00000012275) DIRAS2 (ENSCMIG00000012280) syk (ENSCMIG00000012281) auh (ENSCMIG00000012284) nfil3 (ENSCMIG00000012290) ROR2 (ENSCMIG00000012295) Ciona ANCESTRAL SPECIES ENSGT00530000062962.b #22 Ciona intestinalis MODERN SPECIES 8 ENSCING00000021886 ENSCING00000013657 ENSCING00000005450 ENSCING00000021221 ENSCING00000020666 ENSCING00000024078 ENSCING00000005415 ENSCING00000013658 ENSCING00000019499 ENSCING00000005422 ENSCING00000022980 ENSCING00000005428 ENSCING00000005393 ENSCING00000005398 ENSCING00000005389 ENSCING00000013659 #22 ENSCING00000005391 ENSCING00000000241 ENSCING00000021251 ENSCING00000022653 ENSCING00000023249 ENSCING00000000245 ENSCING00000020274 ENSCING00000013662 ENSCING00000000219 ENSCING00000020193 ENSCING00000014449 ENSCING00000018971 ENSCING00000018988 ENSCING00000003856 ENSCING00000014446 Ciona savignyi MODERN SPECIES 91 ENSCSAVG00000002929 ENSCSAVG00000002932 ENSCSAVG00000002934 ENSCSAVG00000002938 ENSCSAVG00000002987 ENSCSAVG00000002999 ENSCSAVG00000003096 ENSCSAVG00000003099 ENSCSAVG00000003100 ENSCSAVG00000003105 ENSCSAVG00000003110 ENSCSAVG00000003114 ENSCSAVG00000003122 ENSCSAVG00000003125 ENSCSAVG00000003132 ENSCSAVG00000003134 #22 ENSCSAVG00000003150 ENSCSAVG00000003156 ENSCSAVG00000003534 ENSCSAVG00000003543 Ecdysozoa ANCESTRAL SPECIES ENSGT00530000062962.b #22 Fruitfly MODERN SPECIES 16 CG16853 (FBgn0028941) CG9263 (FBgn0032530) CG16852 (FBgn0028942) CG15638 (FBgn0028943) CG33645 (FBgn0053645) CG33644 (FBgn0053644) CG33643 (FBgn0053643) CG33642 (FBgn0053642) CG33641 (FBgn0053641) CG33640 (FBgn0053640) B4 (FBgn0023407) CG46308 (FBgn0284224) CG42810 (FBgn0261992) CG42809 (FBgn0261991) Hsp60D (FBgn0032525) Hacd2 (FBgn0032524) #22 Tehao (FBgn0026760) CG42784 (FBgn0263354) CG43850 (FBgn0264432) CG16956 (FBgn0032523) CG16848 (FBgn0032522) Vm34Ca (FBgn0003983) CG7110 (FBgn0032521) CG10859 (FBgn0032520) CG16957 (FBgn0032519) RpL24 (FBgn0032518) CG7099 (FBgn0032517) Ing5 (FBgn0032516) loqs (FBgn0032515) beta'COP (FBgn0025724) CG9302 (FBgn0032514) Caenorhabditis elegans MODERN SPECIES 2 ckb-2 (WBGene00000512) ckb-1 (WBGene00000511) mnp-1 (WBGene00007139) B0285.6 (WBGene00007138) hse-5 (WBGene00002003) lcmt-1 (WBGene00007137) B0285.3 (WBGene00007136) cdk-12 (WBGene00007135) gly-6 (WBGene00001631) H38K22.9 (WBGene00284844) H38K22.7 (WBGene00044912) H38K22.6 (WBGene00044911) tag-131 (WBGene00006478) dcn-1 (WBGene00010428) evl-14 (WBGene00001352) R10E4.9 (WBGene00011205) #22 R10E4.11 (WBGene00011206) R10E4.7 (WBGene00011203) R10E4.6 (WBGene00011202) nth-1 (WBGene00011201) mcm-5 (WBGene00003157) R10E4.3 (WBGene00011200) sup-26 (WBGene00006331) R10E4.1 (WBGene00011198) sftb-1 (WBGene00011605) T08A11.1 (WBGene00011604) Y44F5A.1 (WBGene00012858) zhit-2 (WBGene00009648) mrpl-21 (WBGene00023422) F43C1.7 (WBGene00023423) nhr-20 (WBGene00003619) Bilateria ANCESTRAL SPECIES ENSGT00530000062962.a ##22 Chordata ANCESTRAL SPECIES ENSGT00530000062962.a ##22 Ciona ANCESTRAL SPECIES 1191 ENSGT00940000153988.B ENSGT00530000062962.a ##22 Ciona savignyi MODERN SPECIES 244 ENSCSAVG00000002332 ENSCSAVG00000002356 ENSCSAVG00000002361 ENSCSAVG00000002365 ENSCSAVG00000002400 ENSCSAVG00000002505 #7 ENSCSAVG00000002507 ENSCSAVG00000002543 ENSCSAVG00000002544 ENSCSAVG00000002648 ENSCSAVG00000002654 ENSCSAVG00000002659 ENSCSAVG00000002668 ENSCSAVG00000002694 ENSCSAVG00000002696 ENSCSAVG00000002700 ##22 ENSCSAVG00000002788 ENSCSAVG00000002790 ENSCSAVG00000002791 ENSCSAVG00000002797 ENSCSAVG00000002851 ENSCSAVG00000003381 ENSCSAVG00000003382 ENSCSAVG00000003393 ENSCSAVG00000003396 ENSCSAVG00000003401 ENSCSAVG00000003417 ENSCSAVG00000003424 ENSCSAVG00000003438 ENSCSAVG00000003558 ENSCSAVG00000003561 Ciona intestinalis MODERN SPECIES ENSCING00000021502 ENSCING00000024240 ENSCING00000024342 ENSCING00000022584 ENSCING00000021920 ENSCING00000021953 ENSCING00000018414 ENSCING00000020055 ENSCING00000024359 ENSCING00000019034 ENSCING00000022764 ENSCING00000012011 ENSCING00000023809 ENSCING00000005732 ENSCING00000012472 ENSCING00000005736 ##22 ENSCING00000021710 ENSCING00000006038 ENSCING00000006035 ENSCING00000006033 ENSCING00000024833 ENSCING00000005710 ENSCING00000005729 ENSCING00000020605 ENSCING00000012466 ENSCING00000017905 ENSCING00000006063 ENSCING00000012465 ENSCING00000021263 ENSCING00000023929 ENSCING00000023349 Vertebrata ANCESTRAL SPECIES 364 ENSGT00940000157171 ENSGT00530000062962.a ##22 Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES ENSGT00530000062962.a.a ##22 Euteleostomi ANCESTRAL SPECIES 91 ENSGT00940000158666 ENSGT00940000155606.b ENSGT00950000182837.b.a ENSGT00940000155687 ENSGT00390000010327 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000165301 ENSGT00390000011515 ENSGT00940000154817.b.b.b Actinopterygii ANCESTRAL SPECIES 131 ENSGT00940000157201 ENSGT00390000012204 ENSGT00940000154533.b.b ENSGT00940000154714 ENSGT00950000182837.b.b ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000165301 ENSGT00390000011515 ENSGT00940000154817.b.b.b Reedfish MODERN SPECIES 16 ASB18 (ENSECRG00000018700) gbx2 (ENSECRG00000018677) AGAP1 (ENSECRG00000018490) rpe (ENSECRG00000018435) UNC80 (ENSECRG00000018287) ENSECRG00000018217 acadl (ENSECRG00000018174) mylz3 (ENSECRG00000018120) lancl1 (ENSECRG00000018081) tnfaip6 (ENSECRG00000018046) rif1 (ENSECRG00000017982) NEB (ENSECRG00000017571) arl5a (ENSECRG00000017434) cacnb4a (ENSECRG00000017312) stam2 (ENSECRG00000017249) hacd2 (ENSECRG00000017217) ##22 adcy5 (ENSECRG00000017181) sec22a (ENSECRG00000017158) pdia5 (ENSECRG00000017116) SEMA5B (ENSECRG00000017076) slc49a4 (ENSECRG00000017045) hspbap1 (ENSECRG00000017023) slc15a2 (ENSECRG00000016943) cyp27a3 (ENSECRG00000016905) eaf2 (ENSECRG00000016887) IQCB1 (ENSECRG00000016851) tsn (ENSECRG00000016831) ENSECRG00000016817 ENSECRG00000016787 nifk (ENSECRG00000016758) CLASP1 (ENSECRG00000016717) Neopterygii ANCESTRAL SPECIES 1 ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029.i.a ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT01090000259987.b.b.a.b ENSGT00940000157201 ENSGT00390000012204 ENSGT00940000154533.b.b ENSGT00940000154714 ENSGT00950000182837.b.b ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000165301 ENSGT00390000011515 ENSGT00940000154817.b.b.b Spotted gar MODERN SPECIES 650 LMLN (ENSLOCG00000002877) gpd1c (ENSLOCG00000002845) OSBPL11 (ENSLOCG00000002826) ENSLOCG00000002813 snx4 (ENSLOCG00000002790) znf148 (ENSLOCG00000002769) slc12a8 (ENSLOCG00000002752) heg1 (ENSLOCG00000002732) itgb5 (ENSLOCG00000002706) tnfaip6 (ENSLOCG00000002695) rif1 (ENSLOCG00000002657) ENSLOCG00000002637 arl5a (ENSLOCG00000002608) cacnb4a (ENSLOCG00000002565) stam2 (ENSLOCG00000002547) hacd2 (ENSLOCG00000002527) ##22 adcy5 (ENSLOCG00000002507) sec22a (ENSLOCG00000002494) pdia5 (ENSLOCG00000002474) SEMA5B (ENSLOCG00000002417) slc49a4 (ENSLOCG00000002401) hspbap1 (ENSLOCG00000002380) slc15a2 (ENSLOCG00000002320) ENSLOCG00000002296 cyp27a3 (ENSLOCG00000002266) eaf2 (ENSLOCG00000002255) iqcb1 (ENSLOCG00000002221) si:dkey-91i10.2 (ENSLOCG00000002209) tsn (ENSLOCG00000002191) ENSLOCG00000002172 nifk (ENSLOCG00000002155) Osteoglossocephalai ANCESTRAL SPECIES 18 ENSGT01090000259987.b.b.a.b ENSGT00940000157201 ENSGT00390000012204 ENSGT00940000154533.b.b.a.a ENSGT00940000154533.b.b.b ENSGT00940000154714 ENSGT00950000182837.b.b ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000165301 ENSGT00390000011515 ENSGT00940000154817.b.b.b Osteoglossiformes ANCESTRAL SPECIES 105 ENSGT00940000163148 ENSGT00940000163322.a.a ENSGT00940000163494.a.a.c.b.a ENSGT00940000156768 ENSGT00940000165279.b ENSGT01090000259987.b.b.a.b ENSGT00940000157201.h ENSGT00940000157201.g ENSGT00390000012204 ENSGT00940000154533.b.a.b ENSGT00940000154533.b.b.a.a ENSGT00940000154533.b.b.b ENSGT00940000154714 ENSGT00950000182837.b.b ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.c.a ENSGT00940000158470 ENSGT00940000156797.c ENSGT00940000156712.b.a ENSGT00940000159893 ENSGT00390000017724.a.b ENSGT00950000182905.a.a.a.a.a.a ENSGT00940000156507.i Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 16 ENSSFOG00015003636 ENSSFOG00015026312 ENSSFOG00015029389 ENSSFOG00015032313 ENSSFOG00015021962 ENSSFOG00015025436 ENSSFOG00015005959 tnfaip6 (ENSSFOG00015005939) ENSSFOG00015029850 ENSSFOG00015027353 ENSSFOG00015005640 ENSSFOG00015027468 arl5a (ENSSFOG00015005606) cacnb4a (ENSSFOG00015005549) ENSSFOG00015024346 hacd2 (ENSSFOG00015005518) ##22 adcy5 (ENSSFOG00015005458) sec22a (ENSSFOG00015005432) pdia5 (ENSSFOG00015005380) SEMA5B (ENSSFOG00015005301) hspbap1 (ENSSFOG00015005296) eaf2 (ENSSFOG00015027361) cyp27a3 (ENSSFOG00015028193) slc15a2 (ENSSFOG00015005042) ENSSFOG00015010846 ENSSFOG00015027112 mrgbp (ENSSFOG00015004958) id1 (ENSSFOG00015004946) HM13 (ENSSFOG00015004935) NCOA3 (ENSSFOG00015004921) ZMYND8 (ENSSFOG00015004869) Asian bonytongue MODERN SPECIES 3 nalcn (ENSSFOG00015021908) itgbl1 (ENSSFOG00015021887) fgf14 (ENSSFOG00015021869) ENSSFOG00015021879 ENSSFOG00015021859 upf3a (ENSSFOG00015021851) P2RY8 (ENSSFOG00015021843) asmtl (ENSSFOG00015021779) itgb5 (ENSSFOG00015021737) tnfaip6 (ENSSFOG00015021726) rif1 (ENSSFOG00015021539) ENSSFOG00015021279 arl5a (ENSSFOG00015021226) cacnb4a (ENSSFOG00015021193) stam2 (ENSSFOG00015021164) hacd2 (ENSSFOG00015028708) ##22 adcy5 (ENSSFOG00015020995) pdia5 (ENSSFOG00015020908) SEMA5B (ENSSFOG00015020771) slc49a4 (ENSSFOG00015020728) slc15a2 (ENSSFOG00015020701) iqcb1 (ENSSFOG00015020688) tsn (ENSSFOG00015020668) RALB (ENSSFOG00015020656) inhbb (ENSSFOG00015032689) GLI2 (ENSSFOG00015020575) tfcp2l1 (ENSSFOG00015020550) CLASP1 (ENSSFOG00015020434) ENSSFOG00015020408 ENSSFOG00015020357 MRAS (ENSSFOG00015032537) P. kingsleyae MODERN SPECIES 228 ENSPKIG00000021887 ENSPKIG00000021459 ENSPKIG00000021202 ENSPKIG00000021101 itgb5 (ENSPKIG00000021035) ENSPKIG00000021010 tnfaip6 (ENSPKIG00000020996) ENSPKIG00000020975 ENSPKIG00000020784 arl5a (ENSPKIG00000020706) ENSPKIG00000020693 cacnb4a (ENSPKIG00000020644) stam2 (ENSPKIG00000020570) hacd2 (ENSPKIG00000020517) ##22 adcy5 (ENSPKIG00000020403) sec22a (ENSPKIG00000020337) pdia5 (ENSPKIG00000020279) SEMA5B (ENSPKIG00000020210) hspbap1 (ENSPKIG00000020178) eaf2 (ENSPKIG00000020151) cyp27a3 (ENSPKIG00000020118) slc15a2 (ENSPKIG00000020077) si:dkey-91i10.2 (ENSPKIG00000020047) nifk (ENSPKIG00000020011) CLASP1 (ENSPKIG00000019951) tfcp2l1 (ENSPKIG00000019892) ENSPKIG00000019853 ENSPKIG00000019749 ENSPKIG00000019696 Clupeocephala ANCESTRAL SPECIES 61 ENSGT00940000163322.a.a.a ENSGT00940000163494.a.a.c.b.a ENSGT00940000163494.a.a.c.a ENSGT00940000156768 ENSGT00940000165279.c ENSGT00940000177452 ENSGT01090000259987.b.b.a.b ENSGT00940000157201 ENSGT00390000012204 ENSGT00940000154533.b.b.a.a ENSGT00940000154533.b.b.b ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00950000182837.b.b.d ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000165301.a ENSGT00390000011515 ENSGT00940000154817.b.a ENSGT00940000159158 Otomorpha ANCESTRAL SPECIES 105 ENSGT00940000163149.b ENSGT00940000163148.a.b.b.a.a.b ENSGT00940000163494.a.a.c.b.a ENSGT00940000163494.a.a.c.a.a ENSGT00940000156768 ENSGT00940000165279.c ENSGT00940000177452 ENSGT01090000259987.b.b.a.b ENSGT00940000157201 ENSGT00390000012204 ENSGT00940000154533.b.b.a.a ENSGT00940000154533.b.b.b ENSGT00940000154714 ENSGT00950000182837.b.b.d ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000165301.a ENSGT00390000011515 ENSGT00940000154817.b.a ENSGT00940000159158 Otophysi ANCESTRAL SPECIES 45 ENSGT01090000260459 ENSGT00940000154840.b.e.a.a.a ENSGT00940000154840.b.e.b ENSGT00940000157521.a.a ENSGT00940000155984.j ENSGT00940000165735 ENSGT00940000159862.a ENSGT00940000159213.q.a ENSGT00390000013973.A.a.c.a ENSGT00940000159158 ENSGT00940000154817.b.a ENSGT00390000011515 ENSGT00940000165301.a ENSGT00950000182837.b.b.d ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000154714 ENSGT00940000154533.b.b.b ENSGT00940000154533.b.b.a.a ENSGT00390000012204 Characiphysae ANCESTRAL SPECIES 3 ENSGT00940000154840.b.e.a.a.b.b.a.b ENSGT01090000260459 ENSGT00940000154840.b.e.b ENSGT00940000157521.a.a ENSGT00940000155984.j ENSGT00940000165735 ENSGT00940000159862.a ENSGT00940000159213.q.a ENSGT00390000013973.A.a.c.a ENSGT00940000159158 ENSGT00940000154817.b.a ENSGT00390000011515 ENSGT00940000165301.a ENSGT00950000182837.b.b.d ENSGT00940000157055.i ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00390000000917 ENSGT00980000198897 ENSGT00940000161024.c ENSGT00940000157234 ENSGT00940000157678 ENSGT00940000161407.a Channel catfish MODERN SPECIES 25 UGGT2 (ENSIPUG00000001011) dnajc3 (ENSIPUG00000001056) ENSIPUG00000001087 ENSIPUG00000001123 dnaaf1 (ENSIPUG00000001139) ENSIPUG00000001152 ENSIPUG00000001157 zgc:162396 (ENSIPUG00000001159) zgc:162396 (ENSIPUG00000001171) ENSIPUG00000001178 ENSIPUG00000001199 zgc:162396 (ENSIPUG00000001213) ENSIPUG00000001224 cacnb4a (ENSIPUG00000001244) stam2 (ENSIPUG00000001294) PTPLB (ENSIPUG00000001338) ##22 adcy5 (ENSIPUG00000001390) sec22a (ENSIPUG00000001444) efnb2a (ENSIPUG00000001518) arglu1 (ENSIPUG00000001542) arhgap15 (ENSIPUG00000001559) gtdc1 (ENSIPUG00000001575) zeb2a (ENSIPUG00000001605) acvr2aa (ENSIPUG00000001630) epc2 (ENSIPUG00000001653) R3HDM1 (ENSIPUG00000001676) rab3gap1 (ENSIPUG00000001801) UBXN4 (ENSIPUG00000001849) ENSIPUG00000001876 nmi (ENSIPUG00000001883) RND3 (ENSIPUG00000001902) Characiphysae_b ANCESTRAL SPECIES 60 ENSGT00940000154840.b.e.a.a.b.b.a.b ENSGT01090000260459 ENSGT00940000154840.b.e.b ENSGT00940000157521.a.a ENSGT00940000155984.j ENSGT00940000165735 ENSGT00940000159862.a ENSGT00940000159213.q.a ENSGT00390000013973.A.a.c.a ENSGT00940000159158 ENSGT00940000154817.b.a ENSGT00390000011515 ENSGT00940000165301.a ENSGT00950000182837.b.b.d ENSGT00940000157055.i ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00390000000917 ENSGT00980000198897 ENSGT00940000161024.c Characoidei ANCESTRAL SPECIES 1 ENSGT00940000154840.b.e.a.a.b.b.a.b ENSGT01090000260459 ENSGT00940000154840.b.e.b ENSGT00940000157521.a.a ENSGT00940000155984.j ENSGT00940000165735 ENSGT00940000159862.a ENSGT00940000159213.q.a ENSGT00390000013973.A.a.c.a ENSGT00940000159158 ENSGT00940000154817.b.a ENSGT00390000011515 ENSGT00940000165301.a ENSGT00950000182837.b.b.d ENSGT00940000157055.i ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00390000000917 ENSGT00980000198897 ENSGT00940000161024.c ENSGT00940000157234 ENSGT00940000157678 ENSGT00940000161407.a Red-bellied piranha MODERN SPECIES 157 cacnb4a (ENSPNAG00000026955) stam2 (ENSPNAG00000004160) hacd2 (ENSPNAG00000004163) ##22 adcy5 (ENSPNAG00000005959) sec22a (ENSPNAG00000006712) pdia5 (ENSPNAG00000004786) SEMA5B (ENSPNAG00000027619) slc49a4 (ENSPNAG00000027688) hspbap1 (ENSPNAG00000027696) slc15a2 (ENSPNAG00000027708) ENSPNAG00000027767 ENSPNAG00000027817 ENSPNAG00000027847 ENSPNAG00000027862 ENSPNAG00000027901 GNAS (ENSPNAG00000027980) DOCK3 (ENSPNAG00000028305) DAG1 (ENSPNAG00000028331) Mexicana tetra MODERN SPECIES 10 atp1a1b (ENSAMXG00000033172) ENSAMXG00000034219 LRP1B (ENSAMXG00000002960) ralba (ENSAMXG00000038817) ENSAMXG00000039380 ENSAMXG00000030861 inhbb (ENSAMXG00000003122) ENSAMXG00000032025 gli2a (ENSAMXG00000043175) ENSAMXG00000029579 clasp1a (ENSAMXG00000003132) nifk (ENSAMXG00000029665) ENSAMXG00000003151 cacnb4a (ENSAMXG00000031115) stam2 (ENSAMXG00000003240) hacd2 (ENSAMXG00000043141) ##22 adcy5 (ENSAMXG00000003268) sec22a (ENSAMXG00000003288) pdia5 (ENSAMXG00000003302) SEMA5B (ENSAMXG00000003356) slc49a4 (ENSAMXG00000003421) hspbap1 (ENSAMXG00000003445) slc15a2 (ENSAMXG00000003462) cyp27a3 (ENSAMXG00000003468) eaf2 (ENSAMXG00000003472) ENSAMXG00000031456 naxd (ENSAMXG00000003485) rab20 (ENSAMXG00000003504) COL4A2 (ENSAMXG00000003576) ENSAMXG00000030541 COL4A1 (ENSAMXG00000003699) Electric eel MODERN SPECIES 1171 stam2 (ENSEEEG00000015151) hacd2 (ENSEEEG00000015154) ##22 adcy5 (ENSEEEG00000015156) Cyprinoidei ANCESTRAL SPECIES 80 ENSGT00940000159158 ENSGT00940000154817.b.a.i ENSGT00390000011515 ENSGT00940000165301.a ENSGT00950000182837.b.b.d ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00940000159213.q.a ENSGT00940000159862.a ENSGT00940000165735 ENSGT00940000155984.j ENSGT00940000157521.a.a ENSGT00940000154840.b.e.b ENSGT01050000244827.B ENSGT00940000154065.b Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 264 ENSGT00390000008796.a ENSGT00390000008796.b ENSGT00390000011570 ENSGT00940000156322.k ENSGT00950000182905.a.a.a.a.b.u.a ENSGT00390000005415.f ENSGT00940000163074.c ENSGT00940000156180.f.b ENSGT00390000011294 ENSGT00680000100037.ib ENSGT00940000154817.b.a.i.a ENSGT00390000011515.t ENSGT00940000165301.a.b ENSGT00950000182837.b.b.d.a ENSGT00940000157055.g ENSGT00530000062962.a.a.c.a ##22 ENSGT00940000158054.d.l ENSGT00940000158470.f ENSGT00940000156797.g Cyprininae_a ANCESTRAL SPECIES 120 ENSGT00940000158398.k ENSGT00390000008796.b ENSGT00940000156322.k ENSGT00950000182905.a.a.a.a.b.u.a ENSGT00950000182905.a.a.a.a.b.u.b ENSGT00390000005415.f ENSGT00940000163074.c ENSGT00940000156180.f.b ENSGT00390000011294 ENSGT00680000100037.ib ENSGT00940000154817.b.a.i.a ENSGT00390000011515.t ENSGT00940000165301.a.b ENSGT00950000182837.b.b.d.a ENSGT00940000157055.g ENSGT00530000062962.a.a.c.a ##22 ENSGT00940000158054.d.l ENSGT00940000158470.f ENSGT00940000156797.g Common carp reference MODERN SPECIES 46 OSBPL11 (ENSCCRG00000051686) ENSCCRG00000051693 lss (ENSCCRG00000051707) ENSCCRG00000051718 ENSCCRG00000066492 ENSCCRG00000040847 ENSCCRG00000080565 ENSCCRG00000081111 ccdc93 (ENSCCRG00000051767) ddx18 (ENSCCRG00000082863) clasp1a (ENSCCRG00000031849) nifk (ENSCCRG00000027193) ENSCCRG00000027351 cacnb4a (ENSCCRG00000027408) stam2 (ENSCCRG00000014368) hacd2 (ENSCCRG00000014361) ##22 adcy5 (ENSCCRG00000025295) sec22a (ENSCCRG00000026263) pdia5 (ENSCCRG00000044266) SEMA5B (ENSCCRG00000039334) slc49a4 (ENSCCRG00000029311) hspbap1 (ENSCCRG00000029323) slc15a2 (ENSCCRG00000029349) gli2a (ENSCCRG00000068447) inhbb (ENSCCRG00000077270) ralba (ENSCCRG00000078850) ENSCCRG00000064948 ENSCCRG00000013640 mab21l3 (ENSCCRG00000006629) dnajc28 (ENSCCRG00000006624) rcan1a (ENSCCRG00000067977) Golden-line barbel MODERN SPECIES 548 snx4 (ENSSGRG00000021145) ENSSGRG00000021135 OSBPL11 (ENSSGRG00000021049) ENSSGRG00000020914 CYP27A1 (ENSSGRG00000020907) ENSSGRG00000020906 bcs1l (ENSSGRG00000020850) ZNF142 (ENSSGRG00000020845) ccdc93 (ENSSGRG00000020709) ddx18 (ENSSGRG00000020616) clasp1a (ENSSGRG00000012503) nifk (ENSSGRG00000012344) ENSSGRG00000012343 cacnb4a (ENSSGRG00000008817) stam2 (ENSSGRG00000008341) hacd2 (ENSSGRG00000008295) ##22 adcy5 (ENSSGRG00000005882) sec22a (ENSSGRG00000005826) pdia5 (ENSSGRG00000005632) Goldfish MODERN SPECIES 49 OSBPL11 (ENSCARG00000032901) LMLN (ENSCARG00000033137) lss (ENSCARG00000033527) ENSCARG00000033696 CYP27A1 (ENSCARG00000033764) ENSCARG00000033943 bcs1l (ENSCARG00000034105) PLCD4 (ENSCARG00000034226) ccdc93 (ENSCARG00000035128) ddx18 (ENSCARG00000036167) clasp1a (ENSCARG00000036353) nifk (ENSCARG00000039738) ENSCARG00000039878 cacnb4a (ENSCARG00000040051) stam2 (ENSCARG00000047170) hacd2 (ENSCARG00000047667) ##22 adcy5 (ENSCARG00000047744) sec22a (ENSCARG00000049115) pdia5 (ENSCARG00000049245) inhbb (ENSCARG00000050827) ralba (ENSCARG00000050852) ENSCARG00000050861 ENSCARG00000050884 ENSCARG00000050891 ENSCARG00000050902 caska (ENSCARG00000051129) GPR82 (ENSCARG00000053544) gpr34b (ENSCARG00000053550) nyx (ENSCARG00000053575) dcaf6 (ENSCARG00000053732) dcaf6 (ENSCARG00000053805) Cyprininae ANCESTRAL SPECIES ENSGT00530000062962.a.a.c.b ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00530000062962.a.a.c.b ##22 Golden-line barbel MODERN SPECIES 4840 hacd2 (ENSSGRG00000005098) ##22 Cyprininae ANCESTRAL SPECIES 208 ENSGT00940000156322.l ENSGT00950000182905.a.a.a.a.b.v ENSGT00390000005415.e ENSGT00940000163074.d ENSGT00940000156180.f.a ENSGT00680000100037.hb ENSGT00940000159158 ENSGT00940000154817.b.a.i.b ENSGT00390000011515.s ENSGT00940000165301.a.a ENSGT00950000182837.b.b.d.b ENSGT00940000157055.h ENSGT00530000062962.a.a.d ##22 ENSGT00940000158054.d.k ENSGT00940000158470.e ENSGT00940000156797.h ENSGT00940000156712.b.f ENSGT01030000234625.D.l ENSGT00940000159893.c ENSGT00940000156507.m ENSGT00940000159213.q.a.c ENSGT00940000159862.a.d ENSGT00940000165735 ENSGT00940000155984.j.b ENSGT00940000157521.a.a.e.b ENSGT00940000154840.b.e.b ENSGT01050000244827.B.a ENSGT00940000154065.b.j Goldfish MODERN SPECIES 27 ENSCARG00000035324 OSBPL11 (ENSCARG00000035336) LMLN (ENSCARG00000035514) ENSCARG00000035732 CYP27A1 (ENSCARG00000035837) ZNF142 (ENSCARG00000036187) PLCD4 (ENSCARG00000036214) ENSCARG00000037194 ddx18 (ENSCARG00000037348) tfcp2l1 (ENSCARG00000039181) clasp1a (ENSCARG00000039713) nifk (ENSCARG00000020098) ENSCARG00000020109 cacnb4a (ENSCARG00000020293) stam2 (ENSCARG00000024836) hacd2 (ENSCARG00000025797) ##22 adcy5 (ENSCARG00000025868) ENSCARG00000026333 sec22a (ENSCARG00000026338) pdia5 (ENSCARG00000026398) SEMA5B (ENSCARG00000028729) slc49a4 (ENSCARG00000029317) hspbap1 (ENSCARG00000029340) slc15a2 (ENSCARG00000029432) gli2a (ENSCARG00000030903) inhbb (ENSCARG00000030932) ralba (ENSCARG00000030954) ENSCARG00000031028 atp1a1b (ENSCARG00000031589) ENSCARG00000032856 rcan1a (ENSCARG00000032862) Cyprininae_a ANCESTRAL SPECIES 31 ENSGT00940000158398.l ENSGT00390000008796.a ENSGT00390000011570 ENSGT00940000156322.l ENSGT00950000182905.a.a.a.a.b.v ENSGT00390000005415.e ENSGT00940000163074.d ENSGT00940000156180.f.a ENSGT00680000100037.hb ENSGT00940000159158 ENSGT00940000154817.b.a.i.b ENSGT00390000011515.s ENSGT00940000165301.a.a ENSGT00950000182837.b.b.d.b ENSGT00940000157055.h ENSGT00530000062962.a.a.d ##22 ENSGT00940000158054.d.k ENSGT00940000158470.e ENSGT00940000156797.h ENSGT00940000156712.b.f ENSGT01030000234625.D.l ENSGT00940000159893.c ENSGT00940000156507.m ENSGT00940000159213.q.a.c ENSGT00940000159862.a.d ENSGT00940000165735 ENSGT00940000155984.j.b ENSGT00940000157521.a.a.e.b ENSGT00940000154840.b.e.b ENSGT01050000244827.B.a ENSGT00940000154065.b.j Golden-line barbel MODERN SPECIES 213 OSBPL11 (ENSSGRG00000023221) LMLN (ENSSGRG00000023210) lss (ENSSGRG00000023208) ENSSGRG00000023205 bcs1l (ENSSGRG00000023195) CYP27A1 (ENSSGRG00000023194) ZNF142 (ENSSGRG00000023192) PLCD4 (ENSSGRG00000023140) ccdc93 (ENSSGRG00000022301) ddx18 (ENSSGRG00000022163) tfcp2l1 (ENSSGRG00000022160) clasp1a (ENSSGRG00000013305) ENSSGRG00000013160 cacnb4a (ENSSGRG00000012793) stam2 (ENSSGRG00000012411) hacd2 (ENSSGRG00000012367) ##22 adcy5 (ENSSGRG00000011401) sec22a (ENSSGRG00000011365) pdia5 (ENSSGRG00000011309) SEMA5B (ENSSGRG00000011289) slc49a4 (ENSSGRG00000011284) hspbap1 (ENSSGRG00000011206) gli2a (ENSSGRG00000010894) inhbb (ENSSGRG00000010890) ENSSGRG00000010888 ralba (ENSSGRG00000010880) Common carp reference MODERN SPECIES 41 ENSCCRG00000017670 OSBPL11 (ENSCCRG00000017660) ENSCCRG00000052654 lss (ENSCCRG00000074874) ENSCCRG00000052655 ENSCCRG00000051725 bcs1l (ENSCCRG00000080918) ENSCCRG00000040826 PLCD4 (ENSCCRG00000047719) tfcp2l1 (ENSCCRG00000047436) clasp1a (ENSCCRG00000052056) nifk (ENSCCRG00000017649) ENSCCRG00000059087 cacnb4a (ENSCCRG00000042133) stam2 (ENSCCRG00000031574) hacd2 (ENSCCRG00000031550) ##22 adcy5 (ENSCCRG00000026276) sec22a (ENSCCRG00000031424) pdia5 (ENSCCRG00000031383) SEMA5B (ENSCCRG00000016665) slc49a4 (ENSCCRG00000016624) hspbap1 (ENSCCRG00000016640) slc15a2 (ENSCCRG00000016646) gli2a (ENSCCRG00000016620) inhbb (ENSCCRG00000076082) ENSCCRG00000057965 ralba (ENSCCRG00000056318) ENSCCRG00000066265 ENSCCRG00000017784 atp1a1b (ENSCCRG00000079304) mab21l3 (ENSCCRG00000006604) Zebrafish MODERN SPECIES 24 cyp27a1.4 (ENSDARG00000055159) CYP27A1 (ENSDARG00000088013) CYP27A1 (ENSDARG00000069186) ENSDARG00000033802 bcs1l (ENSDARG00000012295) ZNF142 (ENSDARG00000061373) PLCD4 (ENSDARG00000040684) ccdc93 (ENSDARG00000040678) ddx18 (ENSDARG00000030789) tfcp2l1 (ENSDARG00000029497) clasp1a (ENSDARG00000010280) nifk (ENSDARG00000040666) ENSDARG00000075929 cacnb4a (ENSDARG00000009738) stam2 (ENSDARG00000005318) hacd2 (ENSDARG00000014806) ##22 adcy5 (ENSDARG00000091342) sec22a (ENSDARG00000078328) pdia5 (ENSDARG00000069242) SEMA5B (ENSDARG00000061471) slc49a4 (ENSDARG00000009783) hspbap1 (ENSDARG00000033771) slc15a2 (ENSDARG00000032010) gli2a (ENSDARG00000025641) inhbb (ENSDARG00000040777) ENSDARG00000074079 ralba (ENSDARG00000040778) LRP1B (ENSDARG00000061517) atp1a1b (ENSDARG00000019856) mab21l3 (ENSDARG00000076013) dnajc28 (ENSDARG00000018181) Clupeiformes ANCESTRAL SPECIES 109 ENSGT00940000163322.a.b.a.b ENSGT00940000163148.a.b.b.a.a.a ENSGT00940000163148.a.b.b.a.b.a ENSGT00940000163149.a.a.p ENSGT00940000163148.a.b.b.b ENSGT00940000163322.a.a.a ENSGT00940000163494.a.a.c.a.a ENSGT00940000156768 ENSGT00940000165279.c ENSGT00940000177452 ENSGT01090000259987.b.b.a.b.j ENSGT00940000157201 ENSGT00390000012204 ENSGT00940000154533.b.b.b ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.c.b ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000000917 ENSGT00940000161024.c ENSGT00940000157678 ENSGT00940000161407.a ENSGT00940000158920 ENSGT00940000157536.a.a ENSGT00940000158114 Denticle herring MODERN SPECIES 19 IRS2 (ENSDCDG00000023734) COL4A1 (ENSDCDG00000023749) ENSDCDG00000023801 ENSDCDG00000023803 COL4A2 (ENSDCDG00000023807) ENSDCDG00000023812 ENSDCDG00000023813 rab20 (ENSDCDG00000023814) naxd (ENSDCDG00000023815) slc15a2 (ENSDCDG00000023845) hspbap1 (ENSDCDG00000014076) slc49a4 (ENSDCDG00000014107) SEMA5B (ENSDCDG00000014359) pdia5 (ENSDCDG00000016593) stam2 (ENSDCDG00000016751) hacd2 (ENSDCDG00000016764) ##22 adcy5 (ENSDCDG00000016786) ENSDCDG00000017151 sec22a (ENSDCDG00000017154) ENSDCDG00000017157 ENSDCDG00000017160 tmem182a (ENSDCDG00000017162) GPR45 (ENSDCDG00000017164) ENSDCDG00000017166 mrpl30 (ENSDCDG00000017170) txndc9 (ENSDCDG00000017173) sik1 (ENSDCDG00000017178) Euteleosteomorpha ANCESTRAL SPECIES 29 ENSGT00940000163149.a.a ENSGT00940000163148.a.b.b.a.a.b ENSGT00940000163322.a.a.a ENSGT00940000163494.a.a.c.b.a ENSGT00940000163494.a.a.c.a.c ENSGT00940000156768 ENSGT00940000165279.c ENSGT00940000177452 ENSGT01090000259987.b.b.a.b ENSGT00940000157201 ENSGT00390000012204 ENSGT00940000154533.b.b.b ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000165301.a ENSGT00390000011515 ENSGT00940000154817.b.a ENSGT00940000159158 Protacanthopterygii ANCESTRAL SPECIES 18 ENSGT00940000163148.a.a.a.a ENSGT00940000163148.a.b.b.b.d ENSGT00940000163322.a.a.a ENSGT00940000163494.a.a.c.b.a ENSGT00940000163494.a.a.c.a.c ENSGT00940000156768 ENSGT00940000165279.c ENSGT00940000177452 ENSGT01090000259987.b.b.a.b ENSGT00940000157201 ENSGT00390000012204 ENSGT00940000154533.b.b.b ENSGT00940000154714 ENSGT00950000182837.b.b.d ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000165301.a ENSGT00390000011515 ENSGT00940000154817.b.a ENSGT00940000159158 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 7 ENSGT00940000163148.a.b.b.b.d.a.a.a.b ENSGT00940000163148.a.b.b.b.d.a.a.a.a.a ENSGT00940000163322.a.a.a.a ENSGT00940000163494.a.a.c.b.a ENSGT00940000163494.a.a.c.a.c.b ENSGT00940000156768.x.a.a ENSGT00940000165279.c.c ENSGT00940000177452 ENSGT01090000259987.b.b.a.b.m ENSGT00940000157201.k ENSGT00390000012204.i ENSGT00940000154533.b.b.b.c.a ENSGT00940000154714.c ENSGT00950000182837.b.b.d.e ENSGT00940000157055.e ENSGT00530000062962.a.a.e ##22 ENSGT00940000158054.d.a ENSGT00940000158470.h ENSGT00940000156797.l ENSGT00940000156712.b.g.a Salmoninae_a ANCESTRAL SPECIES ENSGT00940000163148.a.b.b.b.d.a.a.a.b ENSGT00940000163148.a.b.b.b.d.a.a.a.a.a ENSGT00940000163322.a.a.a.a ENSGT00940000163494.a.a.c.b.a ENSGT00940000163494.a.a.c.a.c.b ENSGT00940000156768.x.a.a ENSGT00940000165279.c.c ENSGT00940000177452 ENSGT01090000259987.b.b.a.b.m ENSGT00940000157201.k ENSGT00390000012204.i ENSGT00940000154533.b.b.b.c.a ENSGT00940000154714.c ENSGT00950000182837.b.b.d.e ENSGT00940000157055.e ENSGT00530000062962.a.a.e ##22 ENSGT00940000158054.d.a ENSGT00940000158470.h ENSGT00940000156797.l ENSGT00940000156712.b.g.a ENSGT01030000234625.D.m ENSGT00940000156507.o ENSGT00950000182905.a.a.a.a.a.a.c ENSGT00950000182905.a.a.a.a.a.a.d.a ENSGT00390000017724.a.b.f ENSGT00940000164632.a.b ENSGT00940000153568.B.r ENSGT00940000165301.a ENSGT00390000011515.x ENSGT00940000154817.b.a.h ENSGT00940000159158.j Salmo ANCESTRAL SPECIES 15 ENSGT00940000163148.a.a.a.a.b ENSGT00940000163148.a.b.b.b.d.a.a.a.b ENSGT00940000163322.a.a.a.a ENSGT00940000163494.a.a.c.b.a ENSGT00940000163494.a.a.c.a.c.b ENSGT00940000156768.x.a.a ENSGT00940000165279.c.c ENSGT00940000177452 ENSGT01090000259987.b.b.a.b.m ENSGT00940000157201.k ENSGT00390000012204.i ENSGT00940000154533.b.b.b.c.a ENSGT00940000154714.c ENSGT00950000182837.b.b.d.e ENSGT00940000157055.e ENSGT00530000062962.a.a.e ##22 ENSGT00940000158054.d.a ENSGT00940000158470.h ENSGT00940000156797.l ENSGT00940000156712.b.g.a ENSGT01030000234625.D.m ENSGT00940000156507.o ENSGT00950000182905.a.a.a.a.a.a.c ENSGT00950000182905.a.a.a.a.a.a.d.a ENSGT00390000017724.a.b.f ENSGT00940000164632.a.b ENSGT00940000153568.B.r ENSGT00940000165301.a ENSGT00390000011515.x ENSGT00940000154817.b.a.h ENSGT00940000159158.j River trout MODERN SPECIES 16 crygm5 (ENSSTUG00000019535) ENSSTUG00000019548 crygm5 (ENSSTUG00000019553) ENSSTUG00000019558 crygs3 (ENSSTUG00000019567) etv5a (ENSSTUG00000021121) ENSSTUG00000021134 itgb5 (ENSSTUG00000021179) ENSSTUG00000022226 tnfaip6 (ENSSTUG00000022240) rif1 (ENSSTUG00000022263) NEB (ENSSTUG00000022715) arl5a (ENSSTUG00000034971) cacnb4a (ENSSTUG00000035016) stam2 (ENSSTUG00000035956) hacd2 (ENSSTUG00000035998) ##22 adcy5 (ENSSTUG00000036098) ENSSTUG00000038719 sec22a (ENSSTUG00000038727) pdia5 (ENSSTUG00000038756) SEMA5B (ENSSTUG00000039127) slc49a4 (ENSSTUG00000039942) slc15a2 (ENSSTUG00000040029) cyp27a3 (ENSSTUG00000040735) cyp27a3 (ENSSTUG00000041358) eaf2 (ENSSTUG00000041372) si:dkey-91i10.2 (ENSSTUG00000041402) tsn (ENSSTUG00000029823) ENSSTUG00000029832 nifk (ENSSTUG00000029878) ENSSTUG00000029898 Atlantic salmon MODERN SPECIES 17 ENSSSAG00000118811 ENSSSAG00000093689 crygs4 (ENSSSAG00000097466) crygs3 (ENSSSAG00000058602) ENSSSAG00000059028 etv5a (ENSSSAG00000117113) ENSSSAG00000092708 itgb5 (ENSSSAG00000067105) tnfaip6 (ENSSSAG00000067259) rif1 (ENSSSAG00000067324) NEB (ENSSSAG00000068711) ENSSSAG00000082036 arl5a (ENSSSAG00000069056) cacnb4a (ENSSSAG00000069087) stam2 (ENSSSAG00000069614) phs1 (ENSSSAG00000069626) ##22 adcy5 (ENSSSAG00000069692) sec22a (ENSSSAG00000103282) pdia5 (ENSSSAG00000070342) SEMA5B (ENSSSAG00000070625) slc49a4 (ENSSSAG00000071686) slc15a2 (ENSSSAG00000071701) cyp27a3 (ENSSSAG00000071743) ENSSSAG00000096528 cyp27a3 (ENSSSAG00000091894) eaf2 (ENSSSAG00000071797) si:dkey-91i10.2 (ENSSSAG00000071800) tsn (ENSSSAG00000089485) ENSSSAG00000071814 nifk (ENSSSAG00000071820) clasp1a (ENSSSAG00000119244) Oncorhynchus ANCESTRAL SPECIES 3 ENSGT00940000163494.a.b.a.b.a ENSGT00940000163148.a.b.b.b.d.a.a.a.a.a ENSGT00940000163322.a.a.a.a ENSGT00940000163494.a.a.c.b.a ENSGT00940000163494.a.a.c.a.c.b ENSGT00940000156768.x.a.a ENSGT00940000165279.c.c ENSGT00940000177452 ENSGT01090000259987.b.b.a.b.m ENSGT00940000157201.k ENSGT00390000012204.i ENSGT00940000154533.b.b.b.c.a ENSGT00940000154714.c ENSGT00950000182837.b.b.d.e ENSGT00940000157055.e ENSGT00530000062962.a.a.e ##22 ENSGT00940000158054.d.a ENSGT00940000158470.h ENSGT00940000156797.l ENSGT00940000156712.b.g.a ENSGT01030000234625.D.m ENSGT00940000156507.o ENSGT00950000182905.a.a.a.a.a.a.c ENSGT00950000182905.a.a.a.a.a.a.d.a ENSGT00390000017724.a.b.f ENSGT00940000164632.a.b ENSGT00940000153568.B.r ENSGT00940000165301.a ENSGT01000000221932 ENSGT00940000154817.b.a.h ENSGT00940000159158.j Rainbow trout MODERN SPECIES 21 ENSOMYG00000022936 crygmxl1 (ENSOMYG00000022946) ENSOMYG00000023050 ENSOMYG00000060522 ENSOMYG00000023116 crygs3 (ENSOMYG00000023161) ENSOMYG00000023466 etv5a (ENSOMYG00000024270) ENSOMYG00000024366 itgb5 (ENSOMYG00000000428) rif1 (ENSOMYG00000000593) NEB (ENSOMYG00000000806) arl5a (ENSOMYG00000000906) cacnb4a (ENSOMYG00000001164) stam2 (ENSOMYG00000001437) hacd2 (ENSOMYG00000001464) ##22 adcy5 (ENSOMYG00000002453) sec22a (ENSOMYG00000002787) pdia5 (ENSOMYG00000003008) SEMA5B (ENSOMYG00000004518) slc49a4 (ENSOMYG00000005688) slc15a2 (ENSOMYG00000006073) cyp27a3 (ENSOMYG00000006253) ENSOMYG00000006307 eaf2 (ENSOMYG00000006328) si:dkey-91i10.2 (ENSOMYG00000006341) tsn (ENSOMYG00000006376) ENSOMYG00000006437 ENSOMYG00000006480 clasp1a (ENSOMYG00000008995) tfcp2l1 (ENSOMYG00000014923) Oncorhynchus_a ANCESTRAL SPECIES 8 ENSGT00940000163494.a.b.a.b.a ENSGT00940000163148.a.b.b.b.d.a.a.a.a.a ENSGT00940000163322.a.a.a.a ENSGT00940000163494.a.a.c.b.a ENSGT00940000163494.a.a.c.a.c.b ENSGT00940000156768.x.a.a ENSGT00940000165279.c.c ENSGT00940000177452 ENSGT01090000259987.b.b.a.b.m ENSGT00940000157201.k ENSGT00390000012204.i ENSGT00940000154533.b.b.b.c.a ENSGT00940000154714.c ENSGT00950000182837.b.b.d.e ENSGT00940000157055.e ENSGT00530000062962.a.a.e ##22 ENSGT00940000158054.d.a ENSGT00940000158470.h ENSGT00940000156797.l ENSGT00940000156712.b.g.a ENSGT01030000234625.D.m ENSGT00940000156507.o ENSGT00950000182905.a.a.a.a.a.a.c ENSGT00390000017724.a.b.f ENSGT00940000164632.a.b ENSGT00940000153568.B.r ENSGT00940000165301.a ENSGT01000000221932 ENSGT00940000154817.b.a.h ENSGT00940000159158.j ENSGT00390000013973.A.a.c.a.i Chinook salmon MODERN SPECIES 22 si:dkey-57a22.15 (ENSOTSG00005027134) ENSOTSG00005027136 crygmxl1 (ENSOTSG00005027137) ENSOTSG00005027140 ENSOTSG00005027141 crygs4 (ENSOTSG00005027142) crygs3 (ENSOTSG00005027143) ENSOTSG00005027152 etv5a (ENSOTSG00005027391) ENSOTSG00005027392 itgb5 (ENSOTSG00005027397) rif1 (ENSOTSG00005030435) arl5a (ENSOTSG00005033125) cacnb4a (ENSOTSG00005033143) stam2 (ENSOTSG00005033253) hacd2 (ENSOTSG00005033256) ##22 adcy5 (ENSOTSG00005033267) sec22a (ENSOTSG00005035954) pdia5 (ENSOTSG00005035974) SEMA5B (ENSOTSG00005036850) slc49a4 (ENSOTSG00005000655) ENSOTSG00005000657 slc15a2 (ENSOTSG00005000673) cyp27a3 (ENSOTSG00005000754) si:dkey-91i10.2 (ENSOTSG00005001605) tsn (ENSOTSG00005001606) ENSOTSG00005001607 ENSOTSG00005001610 clasp1a (ENSOTSG00005001626) tfcp2l1 (ENSOTSG00005001700) ENSOTSG00005002137 Coho salmon MODERN SPECIES 11 crygmxl1 (ENSOKIG00005002609) ENSOKIG00005002632 ENSOKIG00005002660 crygs4 (ENSOKIG00005002666) crygs3 (ENSOKIG00005002671) ENSOKIG00005002945 etv5a (ENSOKIG00005005488) ENSOKIG00005005747 itgb5 (ENSOKIG00005005816) tnfaip6 (ENSOKIG00005006008) rif1 (ENSOKIG00005006058) NEB (ENSOKIG00005006418) arl5a (ENSOKIG00005007573) cacnb4a (ENSOKIG00005007636) stam2 (ENSOKIG00005008136) hacd2 (ENSOKIG00005008273) ##22 adcy5 (ENSOKIG00005008489) sec22a (ENSOKIG00005010642) pdia5 (ENSOKIG00005010691) SEMA5B (ENSOKIG00005011079) ENSOKIG00005012186 slc49a4 (ENSOKIG00005012200) slc15a2 (ENSOKIG00005012254) cyp27a3 (ENSOKIG00005012475) eaf2 (ENSOKIG00005012558) si:dkey-91i10.2 (ENSOKIG00005012568) tsn (ENSOKIG00005012581) ENSOKIG00005012610 ENSOKIG00005012657 clasp1a (ENSOKIG00005012783) tfcp2l1 (ENSOKIG00005013370) Huchen MODERN SPECIES 820 ENSHHUG00000030546 stam2 (ENSHHUG00000030552) hacd2 (ENSHHUG00000030569) ##22 adcy5 (ENSHHUG00000030595) sec22a (ENSHHUG00000030733) pdia5 (ENSHHUG00000030741) SEMA5B (ENSHHUG00000030796) Salmoninae ANCESTRAL SPECIES 286 ENSGT00940000163494.a.b.a.b.b ENSGT00940000163148.a.a.a.a ENSGT00940000163148.a.b.b.b.c.a.a ENSGT00940000163148.a.a.b.p.a.a ENSGT00940000163322.a.a.a.b ENSGT00940000163494.a.a.c.a.c.a ENSGT00940000156768.x.a.b ENSGT00940000165279.c.d ENSGT01090000259987.b.b.a.b.n ENSGT00940000157201.l ENSGT00390000012204.j ENSGT00940000154533.b.b.b.c.b ENSGT00940000154714.d ENSGT00950000182837.b.b.d.f ENSGT00940000157055.f ENSGT00530000062962.a.a.f ##22 ENSGT00940000158054.d.b ENSGT00940000158470.g ENSGT00940000156797.k ENSGT00940000156712.b.g.b ENSGT01030000234625.D.n ENSGT00940000159893 ENSGT00940000156507.p ENSGT00950000182905.a.a.a.a.a.a.d ENSGT00390000017724.a.b.e ENSGT00940000164632.a.a ENSGT00940000153568.B.q ENSGT00390000011515.w ENSGT00940000154817.b.a.g ENSGT00940000159158.i ENSGT00940000159213.q.a.b Salmoninae_a ANCESTRAL SPECIES ENSGT00940000163148.a.b.b.b.c.a.b.b ENSGT00940000163148.a.b.b.b.d.a.a.b ENSGT00940000163322.a.b.a.a ENSGT00940000163148.a.a.b.p.a.a ENSGT00940000163322.a.a.a.b ENSGT00940000163494.a.a.c.a.c.a ENSGT00940000156768.x.a.b ENSGT00940000165279.c.d ENSGT01090000259987.b.b.a.b.n ENSGT00940000157201.l ENSGT00390000012204.j ENSGT00940000154533.b.b.b.c.b ENSGT00940000154714.d ENSGT00950000182837.b.b.d.f ENSGT00940000157055.f ENSGT00530000062962.a.a.f ##22 ENSGT00940000158054.d.b ENSGT00940000158470.g ENSGT00940000156797.k ENSGT00940000156712.b.g.b ENSGT01030000234625.D.n ENSGT00940000159893 ENSGT00940000156507.p ENSGT00950000182905.a.a.a.a.a.a.d.b ENSGT00390000017724.a.b.e ENSGT00940000164632.a.a ENSGT00940000153568.B.q ENSGT00390000011515.w ENSGT00940000154817.b.a.g ENSGT00940000159158.i ENSGT00940000159213.q.a.b Salmo ANCESTRAL SPECIES 10 ENSGT00940000163148.a.b.b.b.c.a.b.a ENSGT00940000163148.a.a.b.p.a.b.a ENSGT00940000163148.a.b.a ENSGT00940000163322.a.a.a.b ENSGT00940000163148.a.a.b.p.a.a ENSGT00940000163494.a.a.c.a.c.a ENSGT00940000156768.x.a.b ENSGT00940000165279.c.d ENSGT01090000259987.b.b.a.b.n ENSGT00940000157201.l ENSGT00390000012204.j ENSGT00940000154533.b.b.b.c.b ENSGT00940000154714.d ENSGT00950000182837.b.b.d.f ENSGT00940000157055.f ENSGT00530000062962.a.a.f ##22 ENSGT00940000158054.d.b ENSGT00940000158470.g ENSGT00940000156797.k ENSGT00940000156712.b.g.b ENSGT01030000234625.D.n ENSGT00940000159893 ENSGT00940000156507.p ENSGT00950000182905.a.a.a.a.a.a.d.b ENSGT00390000017724.a.b.e ENSGT00940000164632.a.a ENSGT00940000153568.B.q ENSGT00390000011515.w ENSGT00940000154817.b.a.g ENSGT00940000159158.i ENSGT00940000155925.j.b.a Atlantic salmon MODERN SPECIES 13 ENSSSAG00000075489 ENSSSAG00000087867 ENSSSAG00000081047 ENSSSAG00000117052 crygs3 (ENSSSAG00000081044) ENSSSAG00000080856 etv5a (ENSSSAG00000080749) itgb5 (ENSSSAG00000080528) tnfaip6 (ENSSSAG00000080507) rif1 (ENSSSAG00000080473) NEB (ENSSSAG00000080313) ENSSSAG00000095727 arl5a (ENSSSAG00000117625) cacnb4a (ENSSSAG00000079752) stam2 (ENSSSAG00000079696) hacd2 (ENSSSAG00000079692) ##22 adcy5 (ENSSSAG00000079557) sec22a (ENSSSAG00000070315) pdia5 (ENSSSAG00000079484) sema5b (ENSSSAG00000079274) slc49a4 (ENSSSAG00000079252) hspbap1 (ENSSSAG00000079248) slc15a2 (ENSSSAG00000079180) ENSSSAG00000079169 eaf2 (ENSSSAG00000079164) si:dkey-91i10.2 (ENSSSAG00000079159) tsn (ENSSSAG00000085312) ENSSSAG00000084634 ENSSSAG00000112678 ENSSSAG00000065361 ENSSSAG00000080302 River trout MODERN SPECIES 12 ENSSTUG00000034610 ENSSTUG00000034646 ENSSTUG00000034648 ENSSTUG00000034659 ENSSTUG00000034669 ENSSTUG00000034761 etv5a (ENSSTUG00000038029) itgb5 (ENSSTUG00000038146) ENSSTUG00000038638 tnfaip6 (ENSSTUG00000038644) rif1 (ENSSTUG00000038677) NEB (ENSSTUG00000039194) arl5a (ENSSTUG00000044332) cacnb4a (ENSSTUG00000044376) stam2 (ENSSTUG00000044883) hacd2 (ENSSTUG00000044929) ##22 adcy5 (ENSSTUG00000044954) sec22a (ENSSTUG00000045141) pdia5 (ENSSTUG00000045164) SEMA5B (ENSSTUG00000045319) slc49a4 (ENSSTUG00000046331) hspbap1 (ENSSTUG00000046373) slc15a2 (ENSSTUG00000046394) cyp27a3 (ENSSTUG00000046565) eaf2 (ENSSTUG00000046573) tsn (ENSSTUG00000046579) nifk (ENSSTUG00000046587) clasp1a (ENSSTUG00000046697) tfcp2l1 (ENSSTUG00000048305) ENSSTUG00000048404 ENSSTUG00000048414 Oncorhynchus ANCESTRAL SPECIES 13 ENSGT00940000163148.a.b.b.b.c.a.b.b ENSGT00940000164501.a.a.b.a.c.a ENSGT00940000163494.a.b.a.a ENSGT00940000163148.a.b.a ENSGT00940000163322.a.a.a.b ENSGT00940000163494.a.a.c.a.c.a ENSGT00940000156768.x.a.b ENSGT00940000165279.c.d ENSGT01090000259987.b.b.a.b.n ENSGT00940000157201.l ENSGT00390000012204.j ENSGT00940000154533.b.b.b.c.b ENSGT00940000154714.d ENSGT00950000182837.b.b.d.f ENSGT00940000157055.f ENSGT00530000062962.a.a.f ##22 ENSGT00940000158054.d.b ENSGT00940000158470.g ENSGT00940000156797.k ENSGT00940000156712.b.g.b ENSGT01030000234625.D.n ENSGT01100000266047 ENSGT00940000159893 ENSGT00940000156507.p ENSGT00950000182905.a.a.a.a.a.a.d.b ENSGT00390000017724.a.b.e ENSGT00940000164632.a.a ENSGT00940000153568.B.q ENSGT00390000011515.w ENSGT00940000154817.b.a.g ENSGT00940000159158.i Oncorhynchus_a ANCESTRAL SPECIES 11 ENSGT00940000163148.a.a.a.a ENSGT00940000163148.a.b.b.b.c.a.a ENSGT00940000163148.a.b.b.b.c.a.b.b ENSGT00940000163148.a.a.b.p.a.a ENSGT00940000163322.a.a.a.b ENSGT00940000163494.a.a.c.a.c.a ENSGT00940000156768.x.a.b ENSGT00940000165279.c.d ENSGT01090000259987.b.b.a.b.n ENSGT00940000157201.l ENSGT00390000012204.j ENSGT00940000154533.b.b.b.c.b ENSGT00940000154714.d ENSGT00950000182837.b.b.d.f ENSGT00940000157055.f ENSGT00530000062962.a.a.f ##22 ENSGT00940000158054.d.b ENSGT00940000158470.g ENSGT00940000156797.k ENSGT00940000156712.b.g.b ENSGT01030000234625.D.n ENSGT01100000266047 ENSGT00940000159893 ENSGT00940000156507.p ENSGT00950000182905.a.a.a.a.a.a.d.b ENSGT00390000017724.a.b.e ENSGT00940000164632.a.a ENSGT00940000153568.B.q ENSGT00390000011515.w ENSGT00940000154817.b.a.g ENSGT00940000159158.i Chinook salmon MODERN SPECIES 18 ENSOTSG00005046928 ENSOTSG00005046927 ENSOTSG00005046926 ENSOTSG00005046925 ENSOTSG00005046924 ENSOTSG00005046923 ENSOTSG00005046366 etv5a (ENSOTSG00005046302) itgb5 (ENSOTSG00005045772) tnfaip6 (ENSOTSG00005045758) rif1 (ENSOTSG00005045754) ENSOTSG00005045524 arl5a (ENSOTSG00005045523) cacnb4a (ENSOTSG00005045339) stam2 (ENSOTSG00005045123) hacd2 (ENSOTSG00005045121) ##22 ENSOTSG00005045120 adcy5 (ENSOTSG00005045119) sec22a (ENSOTSG00005045116) pdia5 (ENSOTSG00005045049) ENSOTSG00005045045 SEMA5B (ENSOTSG00005043978) slc49a4 (ENSOTSG00005043957) hspbap1 (ENSOTSG00005043955) slc15a2 (ENSOTSG00005043950) ENSOTSG00005043941 eaf2 (ENSOTSG00005043940) si:dkey-91i10.2 (ENSOTSG00005043938) tsn (ENSOTSG00005043936) ENSOTSG00005043934 nifk (ENSOTSG00005043929) Coho salmon MODERN SPECIES 18 ENSOKIG00005014475 ENSOKIG00005014446 ENSOKIG00005014426 crygs3 (ENSOKIG00005014406) ENSOKIG00005014398 ENSOKIG00005013720 etv5a (ENSOKIG00005013554) itgb5 (ENSOKIG00005012644) tnfaip6 (ENSOKIG00005012539) rif1 (ENSOKIG00005012486) ENSOKIG00005012457 NEB (ENSOKIG00005007549) arl5a (ENSOKIG00005007290) cacnb4a (ENSOKIG00005007018) stam2 (ENSOKIG00005006796) hacd2 (ENSOKIG00005006738) ##22 adcy5 (ENSOKIG00005006280) sec22a (ENSOKIG00005006193) pdia5 (ENSOKIG00005033311) SEMA5B (ENSOKIG00005032967) slc49a4 (ENSOKIG00005032789) ENSOKIG00005032735 hspbap1 (ENSOKIG00005032690) slc15a2 (ENSOKIG00005032584) ENSOKIG00005032562 eaf2 (ENSOKIG00005032556) si:dkey-91i10.2 (ENSOKIG00005032548) tsn (ENSOKIG00005032530) nifk (ENSOKIG00005032513) ENSOKIG00005031577 tfcp2l1 (ENSOKIG00005031473) Rainbow trout MODERN SPECIES 14 ENSOMYG00000018873 ENSOMYG00000018926 ENSOMYG00000018915 crygs3 (ENSOMYG00000018892) ENSOMYG00000075250 ENSOMYG00000018357 etv5a (ENSOMYG00000018303) itgb5 (ENSOMYG00000044820) ENSOMYG00000058525 tnfaip6 (ENSOMYG00000044775) rif1 (ENSOMYG00000044719) NEB (ENSOMYG00000043749) arl5a (ENSOMYG00000043393) cacnb4a (ENSOMYG00000043021) stam2 (ENSOMYG00000042934) hacd2 (ENSOMYG00000042918) ##22 adcy5 (ENSOMYG00000042888) sec22a (ENSOMYG00000042869) pdia5 (ENSOMYG00000042726) SEMA5B (ENSOMYG00000042244) ENSOMYG00000054103 ENSOMYG00000048452 slc49a4 (ENSOMYG00000042128) ENSOMYG00000042111 hspbap1 (ENSOMYG00000042103) slc15a2 (ENSOMYG00000042096) ENSOMYG00000042092 eaf2 (ENSOMYG00000042087) ENSOMYG00000068681 tsn (ENSOMYG00000042057) nifk (ENSOMYG00000042040) Huchen MODERN SPECIES 2586 ENSHHUG00000005797 ENSHHUG00000005808 arl5a (ENSHHUG00000005816) cacnb4a (ENSHHUG00000005828) stam2 (ENSHHUG00000006955) hacd2 (ENSHHUG00000007087) ##22 Northern pike MODERN SPECIES 15 crygm1 (ENSELUG00000006426) ENSELUG00000006372 ENSELUG00000006396 ENSELUG00000006447 crygs3 (ENSELUG00000006464) ENSELUG00000006614 etv5a (ENSELUG00000006696) ENSELUG00000033272 itgb5 (ENSELUG00000006744) tnfaip6 (ENSELUG00000006792) rif1 (ENSELUG00000006826) NEB (ENSELUG00000006964) arl5a (ENSELUG00000007052) cacnb4a (ENSELUG00000007099) stam2 (ENSELUG00000007160) hacd2 (ENSELUG00000007197) ##22 adcy5 (ENSELUG00000007215) sec22a (ENSELUG00000007224) pdia5 (ENSELUG00000007299) SEMA5B (ENSELUG00000007431) slc49a4 (ENSELUG00000007493) hspbap1 (ENSELUG00000007526) slc15a2 (ENSELUG00000007583) eaf2 (ENSELUG00000007628) si:dkey-91i10.2 (ENSELUG00000007659) ENSELUG00000032569 tsn (ENSELUG00000007669) ENSELUG00000000275 nifk (ENSELUG00000007718) clasp1a (ENSELUG00000000283) tfcp2l1 (ENSELUG00000007801) Acanthomorphata ANCESTRAL SPECIES 5 ENSGT00940000164501.b ENSGT00940000163494.a.b.b ENSGT00940000164501.a.a.b.b ENSGT00940000163322.a.b.a.b ENSGT00940000163148.a.b.b.a.a.a ENSGT00940000163149.b ENSGT00940000165279.c ENSGT00940000177452 ENSGT01090000259987.b.b.a.b ENSGT00940000157201 ENSGT00390000012204 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000169295 Cod MODERN SPECIES 12 ENSGMOG00000034302 hnmt (ENSGMOG00000028888) THSD7B (ENSGMOG00000006342) cxcr4b (ENSGMOG00000033052) dars1 (ENSGMOG00000009591) ENSGMOG00000009572 ENSGMOG00000009565 tnfaip6 (ENSGMOG00000003620) rif1 (ENSGMOG00000003517) ENSGMOG00000024933 ENSGMOG00000031755 NEB (ENSGMOG00000013381) arl5a (ENSGMOG00000012994) CACNB4 (ENSGMOG00000013002) stam2 (ENSGMOG00000013013) hacd2 (ENSGMOG00000026627) ##22 adcy5 (ENSGMOG00000014058) sec22a (ENSGMOG00000014101) pdia5 (ENSGMOG00000015375) slc49a4 (ENSGMOG00000010357) hspbap1 (ENSGMOG00000010372) slc15a2 (ENSGMOG00000010389) cyp27a3 (ENSGMOG00000010411) eaf2 (ENSGMOG00000010425) si:dkey-91i10.2 (ENSGMOG00000028959) tsn (ENSGMOG00000009247) FAM124A (ENSGMOG00000025071) serpine3 (ENSGMOG00000009253) ints6 (ENSGMOG00000009262) wdfy2 (ENSGMOG00000009280) dhrs12 (ENSGMOG00000009293) Euacanthomorphacea ANCESTRAL SPECIES 15 ENSGT00940000164501.b ENSGT00940000163494.a.b.b ENSGT00940000164501.a.a.b.b ENSGT00940000163322.a.b.a.b ENSGT00940000163148.a.b.b.a.a.a ENSGT00940000163148.a.b.b.a.b.b.b.a ENSGT00940000165279.c ENSGT00940000177452 ENSGT01090000259987.b.b.a.b ENSGT00940000157201 ENSGT00390000012204 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000169295 Pinecone sodierfish MODERN SPECIES 13 crygm3 (ENSMMDG00005016267) crygs3 (ENSMMDG00005016271) ENSMMDG00005016299 etv5a (ENSMMDG00005016303) ENSMMDG00005016307 itgb5 (ENSMMDG00005016369) tnfaip6 (ENSMMDG00005019808) rif1 (ENSMMDG00005019828) ENSMMDG00005020460 ENSMMDG00005020463 ENSMMDG00005020467 ENSMMDG00005020473 arl5a (ENSMMDG00005020476) cacnb4b (ENSMMDG00005020501) stam2 (ENSMMDG00005021032) hacd2 (ENSMMDG00005021275) ##22 adcy5 (ENSMMDG00005021278) sec22a (ENSMMDG00005021281) pdia5 (ENSMMDG00005021302) SEMA5B (ENSMMDG00005022204) slc49a4 (ENSMMDG00005022281) hspbap1 (ENSMMDG00005022288) slc15a2 (ENSMMDG00005022292) cyp27a3 (ENSMMDG00005022305) eaf2 (ENSMMDG00005022432) tsn (ENSMMDG00005022433) FAM124A (ENSMMDG00005022434) serpine3 (ENSMMDG00005022436) ints6 (ENSMMDG00005022440) wdfy2 (ENSMMDG00005022455) dhrs12 (ENSMMDG00005022459) Percomorphaceae ANCESTRAL SPECIES 38 ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00960000186941 ENSGT00940000154533.a.a.a ENSGT00940000154533.b.b.b ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000169295 Tiger tail seahorse MODERN SPECIES 49 ENSHCOG00000017389 ENSHCOG00000017385 ENSHCOG00000017382 ENSHCOG00000017274 LONRF2 (ENSHCOG00000017093) ENSHCOG00000017082 PDCL3 (ENSHCOG00000017074) TBC1D8 (ENSHCOG00000017043) ENSHCOG00000016784 ENSHCOG00000016772 ENSHCOG00000016753 ENSHCOG00000016733 arl5a (ENSHCOG00000016616) CACNB4 (ENSHCOG00000016598) stam2 (ENSHCOG00000016562) hacd2 (ENSHCOG00000016555) ##22 adcy5 (ENSHCOG00000016524) sec22a (ENSHCOG00000016488) pdia5 (ENSHCOG00000016469) SEMA5B (ENSHCOG00000016432) Percomorphaceae_B ANCESTRAL SPECIES 17 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00970000193758 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000169295 Percomorphaceae_C ANCESTRAL SPECIES 13 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00970000193758 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Eupercaria ANCESTRAL SPECIES 18 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00970000193758 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Tetraodontidae ANCESTRAL SPECIES ENSGT00940000154633.id.a ENSGT01090000260082.d.a.b.o.b ENSGT01000000215431 ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Fugu MODERN SPECIES ENSTRUG00000015416 ENSTRUG00000015402 ENSTRUG00000023550 ENSTRUG00000028440 ENSTRUG00000015378 ENSTRUG00000015305 ENSTRUG00000020129 MAP4K4 (ENSTRUG00000015124) ENSTRUG00000015072 ENSTRUG00000031657 PDCL3 (ENSTRUG00000015045) TBC1D8 (ENSTRUG00000014914) arl5a (ENSTRUG00000014614) CACNB4 (ENSTRUG00000014531) stam2 (ENSTRUG00000014510) hacd2 (ENSTRUG00000014469) ##22 adcy5 (ENSTRUG00000014280) sec22a (ENSTRUG00000014240) pdia5 (ENSTRUG00000014202) SEMA5B (ENSTRUG00000014169) slc49a4 (ENSTRUG00000014109) hspbap1 (ENSTRUG00000021585) slc15a2 (ENSTRUG00000013965) cyp27a3 (ENSTRUG00000013824) eaf2 (ENSTRUG00000013758) si:dkey-91i10.2 (ENSTRUG00000019990) ENSTRUG00000030523 tsn (ENSTRUG00000013691) FAM124A (ENSTRUG00000021712) serpine3 (ENSTRUG00000013430) ints6 (ENSTRUG00000013306) Tetraodon MODERN SPECIES 13 ENSTNIG00000015683 ENSTNIG00000015684 ENSTNIG00000015685 ENSTNIG00000015686 ENSTNIG00000015687 ENSTNIG00000015688 MAP4K4 (ENSTNIG00000015689) LONRF2 (ENSTNIG00000015690) PDCL3 (ENSTNIG00000015691) TBC1D8 (ENSTNIG00000015692) ENSTNIG00000015693 NEB (ENSTNIG00000015694) arl5a (ENSTNIG00000000814) CACNB4 (ENSTNIG00000015695) stam2 (ENSTNIG00000015696) hacd2 (ENSTNIG00000001029) ##22 adcy5 (ENSTNIG00000015697) sec22a (ENSTNIG00000015698) pdia5 (ENSTNIG00000015699) SEMA5B (ENSTNIG00000015700) slc49a4 (ENSTNIG00000015701) hspbap1 (ENSTNIG00000015702) slc15a2 (ENSTNIG00000015703) cyp27a3 (ENSTNIG00000015704) eaf2 (ENSTNIG00000015705) si:dkey-91i10.2 (ENSTNIG00000015706) tsn (ENSTNIG00000015707) FAM124A (ENSTNIG00000000831) serpine3 (ENSTNIG00000015708) ints6 (ENSTNIG00000015709) wdfy2 (ENSTNIG00000015710) Eupecaria_A ANCESTRAL SPECIES 18 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00970000193758 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 324 ENSLBEG00000012883 ENSLBEG00000013709 ENSLBEG00000015344 ENSLBEG00000015379 ENSLBEG00000015394 ENSLBEG00000015426 TBC1D8 (ENSLBEG00000015524) ENSLBEG00000015613 ENSLBEG00000015633 ENSLBEG00000015671 ENSLBEG00000015808 ENSLBEG00000016103 arl5a (ENSLBEG00000016471) CACNB4 (ENSLBEG00000016524) stam2 (ENSLBEG00000016583) hacd2 (ENSLBEG00000016611) ##22 Ballan wrasse MODERN SPECIES 2154 ENSLBEG00000010030 hacd2 (ENSLBEG00000009988) ##22 Eupecaria_B ANCESTRAL SPECIES 18 ENSGT01090000260082.d.a.b.o.b ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Perciformes ANCESTRAL SPECIES 20 ENSGT00940000154633.id.a ENSGT01090000260082.d.a.b.o.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 ENSGT00940000163978 Cottioidei ANCESTRAL SPECIES 14 ENSGT00940000165376 ENSGT00530000063927.a.b ENSGT00940000157559 ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 ENSGT00940000163978 ENSGT01030000234640.a.a.d Lumpfish MODERN SPECIES 13 ENSCLMG00005020218 ENSCLMG00005020225 ENSCLMG00005020228 ENSCLMG00005020229 ENSCLMG00005020245 LONRF2 (ENSCLMG00005020705) ENSCLMG00005020720 PDCL3 (ENSCLMG00005020722) TBC1D8 (ENSCLMG00005020726) ENSCLMG00005020756 ENSCLMG00005020758 ENSCLMG00005009026 ARL5A (ENSCLMG00005009031) CACNB4 (ENSCLMG00005009034) stam2 (ENSCLMG00005009103) hacd2 (ENSCLMG00005009104) ##22 adcy5 (ENSCLMG00005009105) ENSCLMG00005009106 sec22a (ENSCLMG00005009107) pdia5 (ENSCLMG00005009114) slc49a4 (ENSCLMG00005010744) hspbap1 (ENSCLMG00005010746) slc15a2 (ENSCLMG00005010747) cyp27a3 (ENSCLMG00005010750) eaf2 (ENSCLMG00005010957) tsn (ENSCLMG00005010961) FAM124A (ENSCLMG00005010963) ENSCLMG00005010966 ENSCLMG00005010967 FAM124A (ENSCLMG00005010968) serpine3 (ENSCLMG00005010969) Stickleback MODERN SPECIES 198 arl5a (ENSGACG00000001204) CACNB4 (ENSGACG00000001218) stam2 (ENSGACG00000001225) hacd2 (ENSGACG00000001232) ##22 adcy5 (ENSGACG00000001233) sec22a (ENSGACG00000001235) pdia5 (ENSGACG00000001238) Perciformes_a ANCESTRAL SPECIES 21 ENSGT00940000154633.id.a ENSGT01090000260082.d.a.b.o.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 ENSGT00940000163978 Pike perch MODERN SPECIES 1 RDX (ENSSLUG00000009314) ENSSLUG00000010860 ENSSLUG00000010866 ENSSLUG00000010872 ENSSLUG00000010893 ENSSLUG00000010918 ENSSLUG00000011001 ENSSLUG00000011528 ENSSLUG00000011540 PDCL3 (ENSSLUG00000011547) TBC1D8 (ENSSLUG00000011558) NEB (ENSSLUG00000011637) arl5a (ENSSLUG00000012181) CACNB4 (ENSSLUG00000012215) stam2 (ENSSLUG00000012489) hacd2 (ENSSLUG00000012624) ##22 adcy5 (ENSSLUG00000012654) sec22a (ENSSLUG00000012812) pdia5 (ENSSLUG00000012869) SEMA5B (ENSSLUG00000013249) slc49a4 (ENSSLUG00000013529) hspbap1 (ENSSLUG00000013535) slc15a2 (ENSSLUG00000013551) cyp27a3 (ENSSLUG00000013618) eaf2 (ENSSLUG00000014376) tsn (ENSSLUG00000014379) FAM124A (ENSSLUG00000014385) serpine3 (ENSSLUG00000014394) ints6 (ENSSLUG00000014407) wdfy2 (ENSSLUG00000000058) dhrs12 (ENSSLUG00000000075) Channel bull blenny MODERN SPECIES 13 ENSCGOG00000019934 ENSCGOG00000019926 ENSCGOG00000012048 ENSCGOG00000011729 ENSCGOG00000011726 PDCL3 (ENSCGOG00000011721) TBC1D8 (ENSCGOG00000011707) NEB (ENSCGOG00000007995) arl5a (ENSCGOG00000007888) CACNB4 (ENSCGOG00000004634) hacd2 (ENSCGOG00000004485) ##22 adcy5 (ENSCGOG00000004478) ENSCGOG00000004477 SEMA5B (ENSCGOG00000004038) slc49a4 (ENSCGOG00000004023) hspbap1 (ENSCGOG00000004022) slc15a2 (ENSCGOG00000003840) cyp27a3 (ENSCGOG00000003834) eaf2 (ENSCGOG00000003833) serpine3 (ENSCGOG00000003828) ints6 (ENSCGOG00000003195) wdfy2 (ENSCGOG00000002845) dhrs12 (ENSCGOG00000002604) ENSCGOG00000002595 ENSCGOG00000002591 ENSCGOG00000016542 Eupecaria_C ANCESTRAL SPECIES 21 ENSGT01090000260082.d.a.b.o.b ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Gilthead seabream MODERN SPECIES 23 ENSSAUG00010010047 ENSSAUG00010010048 ENSSAUG00010010054 ENSSAUG00010010059 IL-1RII (ENSSAUG00010010063) ENSSAUG00010010134 LONRF2 (ENSSAUG00010014559) ENSSAUG00010014561 ENSSAUG00010014564 PDCL3 (ENSSAUG00010014568) TBC1D8 (ENSSAUG00010014571) NEB (ENSSAUG00010014596) arl5a (ENSSAUG00010014726) CACNB4 (ENSSAUG00010014802) stam2 (ENSSAUG00010018342) hacd2 (ENSSAUG00010019006) ##22 adcy5 (ENSSAUG00010019016) sec22a (ENSSAUG00010019528) pdia5 (ENSSAUG00010019555) SEMA5B (ENSSAUG00010020834) slc49a4 (ENSSAUG00010021301) hspbap1 (ENSSAUG00010021304) slc15a2 (ENSSAUG00010021311) cyp27a3 (ENSSAUG00010021700) eaf2 (ENSSAUG00010021707) si:dkey-91i10.2 (ENSSAUG00010021708) tsn (ENSSAUG00010021709) FAM124A (ENSSAUG00010021711) serpine3 (ENSSAUG00010021715) ints6 (ENSSAUG00010021719) wdfy2 (ENSSAUG00010021783) Eupercaria_incertae_sedis ANCESTRAL SPECIES 18 ENSGT01090000260082.d.a.b.o.b ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 European seabass MODERN SPECIES 5 ENSDLAG00005011805 ENSDLAG00005032291 ENSDLAG00005028942 ENSDLAG00005033897 ENSDLAG00005021859 ENSDLAG00005013606 MAP4K4 (ENSDLAG00005012299) ENSDLAG00005012269 ENSDLAG00005028200 ENSDLAG00005032770 ENSDLAG00005012252 TBC1D8 (ENSDLAG00005012005) NEB (ENSDLAG00005007636) ENSDLAG00005006755 stam2 (ENSDLAG00005006515) hacd2 (ENSDLAG00005006469) ##22 adcy5 (ENSDLAG00005006190) sec22a (ENSDLAG00005006152) pdia5 (ENSDLAG00005004909) SEMA5B (ENSDLAG00005004374) slc49a4 (ENSDLAG00005014330) hspbap1 (ENSDLAG00005014311) slc15a2 (ENSDLAG00005014023) cyp27a3 (ENSDLAG00005013958) ENSDLAG00005013944 tsn (ENSDLAG00005013926) FAM124A (ENSDLAG00005013922) serpine3 (ENSDLAG00005013918) ints6 (ENSDLAG00005012538) wdfy2 (ENSDLAG00005012057) dhrs12 (ENSDLAG00005012034) Large yellow croaker MODERN SPECIES 65 ENSLCRG00005018344 ENSLCRG00005018342 ENSLCRG00005018341 PDCL3 (ENSLCRG00005018340) TBC1D8 (ENSLCRG00005018277) NEB (ENSLCRG00005018164) arl5a (ENSLCRG00005018151) CACNB4 (ENSLCRG00005017846) stam2 (ENSLCRG00005017826) hacd2 (ENSLCRG00005017822) ##22 adcy5 (ENSLCRG00005016872) sec22a (ENSLCRG00005016860) pdia5 (ENSLCRG00005016119) SEMA5B (ENSLCRG00005015380) slc49a4 (ENSLCRG00005015362) hspbap1 (ENSLCRG00005015358) slc15a2 (ENSLCRG00005015312) cyp27a3 (ENSLCRG00005015275) Percomorphaceae_D ANCESTRAL SPECIES 12 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00970000193758 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Anabantaria ANCESTRAL SPECIES 14 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000180504 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Zig-zag eel MODERN SPECIES 13 ENSMAMG00000020372 ENSMAMG00000020363 ENSMAMG00000024378 ENSMAMG00000026143 ENSMAMG00000020340 ENSMAMG00000020327 ENSMAMG00000020244 ENSMAMG00000020227 ENSMAMG00000024626 ENSMAMG00000020192 ENSMAMG00000020181 NEB (ENSMAMG00000019894) ARL5A (ENSMAMG00000027277) CACNB4 (ENSMAMG00000019860) stam2 (ENSMAMG00000019821) hacd2 (ENSMAMG00000019801) ##22 adcy5 (ENSMAMG00000019746) sec22a (ENSMAMG00000019731) pdia5 (ENSMAMG00000019703) SEMA5B (ENSMAMG00000019659) slc49a4 (ENSMAMG00000019623) hspbap1 (ENSMAMG00000026001) slc15a2 (ENSMAMG00000026378) cyp27a3 (ENSMAMG00000019578) eaf2 (ENSMAMG00000019564) si:dkey-91i10.2 (ENSMAMG00000019548) tsn (ENSMAMG00000025392) FAM124A (ENSMAMG00000024614) serpine3 (ENSMAMG00000019529) ints6 (ENSMAMG00000019509) wdfy2 (ENSMAMG00000019471) Anabantoidei ANCESTRAL SPECIES 13 ENSGT01090000260082.d.a.b.o.b ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Siamese fighting fish MODERN SPECIES 11 ENSBSLG00000024274 ENSBSLG00000024960 ENSBSLG00000024967 ENSBSLG00000024988 ENSBSLG00000024992 ENSBSLG00000025002 ENSBSLG00000025004 ENSBSLG00000025030 LONRF2 (ENSBSLG00000025406) ENSBSLG00000025438 PDCL3 (ENSBSLG00000025447) TBC1D8 (ENSBSLG00000025466) arl5a (ENSBSLG00000025945) ENSBSLG00000026022 stam2 (ENSBSLG00000026132) hacd2 (ENSBSLG00000026204) ##22 adcy5 (ENSBSLG00000026233) ENSBSLG00000026257 sec22a (ENSBSLG00000026258) pdia5 (ENSBSLG00000026268) SEMA5B (ENSBSLG00000026308) slc49a4 (ENSBSLG00000026314) hspbap1 (ENSBSLG00000026317) slc15a2 (ENSBSLG00000026319) cyp27a3 (ENSBSLG00000026352) eaf2 (ENSBSLG00000026362) si:dkey-91i10.2 (ENSBSLG00000026366) tsn (ENSBSLG00000026370) FAM124A (ENSBSLG00000004888) serpine3 (ENSBSLG00000004913) ints6 (ENSBSLG00000005334) Climbing perch MODERN SPECIES 12 ENSATEG00000002260 ENSATEG00000002343 ENSATEG00000002356 ENSATEG00000002367 ENSATEG00000002411 ENSATEG00000002454 ENSATEG00000002499 ENSATEG00000002621 ENSATEG00000002636 ENSATEG00000002656 ENSATEG00000002673 NEB (ENSATEG00000002749) ARL5A (ENSATEG00000003498) CACNB4 (ENSATEG00000003524) stam2 (ENSATEG00000028152) hacd2 (ENSATEG00000003649) ##22 adcy5 (ENSATEG00000003696) sec22a (ENSATEG00000003791) pdia5 (ENSATEG00000003836) SEMA5B (ENSATEG00000003908) slc49a4 (ENSATEG00000004012) hspbap1 (ENSATEG00000028873) slc15a2 (ENSATEG00000004067) cyp27a3 (ENSATEG00000004072) eaf2 (ENSATEG00000004077) si:dkey-91i10.2 (ENSATEG00000029540) tsn (ENSATEG00000004115) FAM124A (ENSATEG00000004152) serpine3 (ENSATEG00000004161) ints6 (ENSATEG00000004188) wdfy2 (ENSATEG00000004266) Carangaria ANCESTRAL SPECIES 12 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00970000193758 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Pleuronectoidei ANCESTRAL SPECIES 9 ENSGT01090000260082.d.a.b.o.b ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Turbot MODERN SPECIES 5 ENSSMAG00000007284 ENSSMAG00000031127 ENSSMAG00000007236 ENSSMAG00000007220 ENSSMAG00000007167 ENSSMAG00000007143 ENSSMAG00000007075 ENSSMAG00000007046 ENSSMAG00000007031 ENSSMAG00000007011 ENSSMAG00000006884 NEB (ENSSMAG00000006578) ARL5A (ENSSMAG00000031119) CACNB4 (ENSSMAG00000006462) stam2 (ENSSMAG00000006399) hacd2 (ENSSMAG00000029560) ##22 adcy5 (ENSSMAG00000006314) sec22a (ENSSMAG00000006273) pdia5 (ENSSMAG00000006223) slc49a4 (ENSSMAG00000006001) hspbap1 (ENSSMAG00000005985) slc15a2 (ENSSMAG00000005904) cyp27a3 (ENSSMAG00000005878) eaf2 (ENSSMAG00000005873) si:dkey-91i10.2 (ENSSMAG00000005848) tsn (ENSSMAG00000026082) FAM124A (ENSSMAG00000005813) serpine3 (ENSSMAG00000005778) ints6 (ENSSMAG00000005656) wdfy2 (ENSSMAG00000005603) dhrs12 (ENSSMAG00000005504) Tongue sole MODERN SPECIES 7 LANCL3 (ENSCSEG00000003293) PLEKHM3 (ENSCSEG00000003299) fzd5 (ENSCSEG00000003301) ccnyl1 (ENSCSEG00000003305) ENSCSEG00000003312 ENSCSEG00000003329 ENSCSEG00000003336 ENSCSEG00000003345 PDCL3 (ENSCSEG00000003347) TBC1D8 (ENSCSEG00000003354) NEB (ENSCSEG00000003369) arl5a (ENSCSEG00000003442) cacnb4b (ENSCSEG00000003446) ENSCSEG00000003457 stam2 (ENSCSEG00000003459) hacd2 (ENSCSEG00000003470) ##22 tnfaip6 (ENSCSEG00000003481) itgb5 (ENSCSEG00000003492) etv5a (ENSCSEG00000003505) DGKG (ENSCSEG00000003511) ENSCSEG00000003524 ENSCSEG00000003530 ENSCSEG00000003606 ENSCSEG00000003610 ENSCSEG00000003618 ENSCSEG00000003694 ENSCSEG00000003757 si:dkey-57a22.15 (ENSCSEG00000003791) ENSCSEG00000003806 crygm7 (ENSCSEG00000003815) ENSCSEG00000003820 Carangaria_A ANCESTRAL SPECIES 11 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00970000193758 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Seriola ANCESTRAL SPECIES 6 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000180504 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Yellowtail amberjack MODERN SPECIES 2832 ENSSLDG00000012741 LONRF2 (ENSSLDG00000012720) ENSSLDG00000012705 PDCL3 (ENSSLDG00000012691) TBC1D8 (ENSSLDG00000012658) NEB (ENSSLDG00000012295) arl5a (ENSSLDG00000012215) CACNB4 (ENSSLDG00000012176) stam2 (ENSSLDG00000012122) hacd2 (ENSSLDG00000012094) ##22 adcy5 (ENSSLDG00000012045) sec22a (ENSSLDG00000012018) pdia5 (ENSSLDG00000011961) SEMA5B (ENSSLDG00000011835) Greater amberjack MODERN SPECIES 21 ENSSDUG00000013210 ENSSDUG00000013156 ENSSDUG00000013124 ENSSDUG00000013116 ENSSDUG00000013083 ENSSDUG00000012823 LONRF2 (ENSSDUG00000012768) ENSSDUG00000012749 PDCL3 (ENSSDUG00000012715) TBC1D8 (ENSSDUG00000012655) ENSSDUG00000012644 NEB (ENSSDUG00000012291) arl5a (ENSSDUG00000012261) CACNB4 (ENSSDUG00000012235) stam2 (ENSSDUG00000012211) hacd2 (ENSSDUG00000012187) ##22 adcy5 (ENSSDUG00000012121) sec22a (ENSSDUG00000012096) pdia5 (ENSSDUG00000012035) SEMA5B (ENSSDUG00000011942) slc49a4 (ENSSDUG00000011881) hspbap1 (ENSSDUG00000011859) slc15a2 (ENSSDUG00000011607) cyp27a3 (ENSSDUG00000011448) eaf2 (ENSSDUG00000011419) si:dkey-91i10.2 (ENSSDUG00000011404) tsn (ENSSDUG00000011388) FAM124A (ENSSDUG00000011382) serpine3 (ENSSDUG00000011369) ints6 (ENSSDUG00000011327) wdfy2 (ENSSDUG00000011278) Barramundi perch DUPLICATION Barramundi perch DUPLICATION Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 1777 hacd2 (ENSLCAG00010017743) ##22 Barramundi perch MODERN SPECIES 259 hacd2 (ENSLCAG00010017605) ##22 adcy5 (ENSLCAG00010017625) sec22a (ENSLCAG00010017756) pdia5 (ENSLCAG00010017807) SEMA5B (ENSLCAG00010017995) slc49a4 (ENSLCAG00010018002) hspbap1 (ENSLCAG00010018011) slc15a2 (ENSLCAG00010018018) cyp27a3 (ENSLCAG00010018029) eaf2 (ENSLCAG00010018035) si:dkey-91i10.2 (ENSLCAG00010018037) tsn (ENSLCAG00010018041) FAM124A (ENSLCAG00010018044) serpine3 (ENSLCAG00010018046) ints6 (ENSLCAG00010018117) wdfy2 (ENSLCAG00010018425) Barramundi perch MODERN SPECIES 847 STAM2 (ENSLCAG00010003047) hacd2 (ENSLCAG00010003055) ##22 Barramundi perch MODERN SPECIES 559 ENSLCAG00010012283 PDCL3 (ENSLCAG00010012288) TBC1D8 (ENSLCAG00010012297) ENSLCAG00010012315 NEB (ENSLCAG00010012406) arl5a (ENSLCAG00010012609) CACNB4 (ENSLCAG00010012825) stam2 (ENSLCAG00010013283) HACD2 (ENSLCAG00010013290) ##22 Ovalentaria ANCESTRAL SPECIES 14 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00970000193758 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000169295 Atherinomorphae ANCESTRAL SPECIES 13 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00970000193758 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Cyprinodontiformes ANCESTRAL SPECIES 15 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00960000186941 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Aplocheiloidei ANCESTRAL SPECIES 6 ENSGT01090000260082.d.a.b.o.b ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.b.b.b ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Turquoise killifish MODERN SPECIES 1623 ENSNFUG00015008863 ENSNFUG00015008867 ENSNFUG00015008877 ENSNFUG00015008892 CABZ01054962.1 (ENSNFUG00015008926) IL18R1 (ENSNFUG00015009023) ENSNFUG00015010723 ENSNFUG00015024645 LONRF2 (ENSNFUG00015005022) PDCL3 (ENSNFUG00015005043) NMS (ENSNFUG00015005059) TBC1D8 (ENSNFUG00015005072) ARL5A (ENSNFUG00015006092) ENSNFUG00015006204 stam2 (ENSNFUG00015006753) PTPLB (ENSNFUG00015006878) ##22 adcy5 (ENSNFUG00015006978) SEC22A (ENSNFUG00015007779) PDIA5 (ENSNFUG00015007813) SEMA5B (ENSNFUG00015007995) ENSNFUG00015008523 DIRC2 (ENSNFUG00015008529) HSPBAP1 (ENSNFUG00015008546) SLC15A2 (ENSNFUG00015008615) cyp27a3 (ENSNFUG00015009577) eaf2 (ENSNFUG00015009727) SI (ENSNFUG00015009737) TSN (ENSNFUG00015009750) FAM124A (ENSNFUG00015009762) ENSNFUG00015009768 serpine3 (ENSNFUG00015009796) Mangrove rivulus MODERN SPECIES 57 ENSKMAG00000005912 arl5a (ENSKMAG00000005826) CACNB4 (ENSKMAG00000005774) stam2 (ENSKMAG00000005736) hacd2 (ENSKMAG00000005697) ##22 adcy5 (ENSKMAG00000005615) sec22a (ENSKMAG00000005571) pdia5 (ENSKMAG00000005495) SEMA5B (ENSKMAG00000005261) ENSKMAG00000005198 slc49a4 (ENSKMAG00000005169) hspbap1 (ENSKMAG00000005138) slc15a2 (ENSKMAG00000005098) cyp27a3 (ENSKMAG00000005059) eaf2 (ENSKMAG00000005018) tsn (ENSKMAG00000004996) FAM124A (ENSKMAG00000004984) serpine3 (ENSKMAG00000004965) ints6 (ENSKMAG00000004857) wdfy2 (ENSKMAG00000004788) Cyprinodontoidei ANCESTRAL SPECIES 13 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00960000186941 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Poeciliinae ANCESTRAL SPECIES ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b.f ENSGT01090000259985.b.b.b.a.b.e ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Poecilia ANCESTRAL SPECIES 13 ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b.f ENSGT01090000259985.b.b.b.a.b.e ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000163342.a.b.a.a.db.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 NAME_6 ANCESTRAL SPECIES 46 ENSGT01090000259985.b.a.a.a.t ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b.f ENSGT01090000259985.b.b.b.a.b.e ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000163342.a.b.a.a.db.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a.s ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 1803 ENSPLAG00000016496 arl5a (ENSPLAG00000016532) CACNB4 (ENSPLAG00000016556) stam2 (ENSPLAG00000016605) hacd2 (ENSPLAG00000016642) ##22 Sailfin molly MODERN SPECIES 2025 hacd2 (ENSPLAG00000016781) ##22 adcy5 (ENSPLAG00000016815) sec22a (ENSPLAG00000016827) Amazon molly MODERN SPECIES 271 ENSPFOG00000017581 ENSPFOG00000024092 ENSPFOG00000017568 ENSPFOG00000017547 ENSPFOG00000017535 ENSPFOG00000017532 ENSPFOG00000017421 LONRF2 (ENSPFOG00000017363) ENSPFOG00000017326 PDCL3 (ENSPFOG00000017314) TBC1D8 (ENSPFOG00000017224) ENSPFOG00000017174 ENSPFOG00000017124 stam2 (ENSPFOG00000017050) hacd2 (ENSPFOG00000017008) ##22 adcy5 (ENSPFOG00000016833) sec22a (ENSPFOG00000016784) pdia5 (ENSPFOG00000016645) SEMA5B (ENSPFOG00000016495) slc49a4 (ENSPFOG00000016456) hspbap1 (ENSPFOG00000016443) slc15a2 (ENSPFOG00000016217) cyp27a3 (ENSPFOG00000016109) eaf2 (ENSPFOG00000016090) si:dkey-91i10.2 (ENSPFOG00000016078) tsn (ENSPFOG00000016063) FAM124A (ENSPFOG00000016040) serpine3 (ENSPFOG00000022591) ints6 (ENSPFOG00000015936) wdfy2 (ENSPFOG00000015858) Guppy MODERN SPECIES 450 ENSPREG00000001752 ENSPREG00000001868 ENSPREG00000001958 ENSPREG00000002016 ENSPREG00000002031 LONRF2 (ENSPREG00000002145) ENSPREG00000002164 ENSPREG00000002217 ENSPREG00000002245 PDCL3 (ENSPREG00000002284) TBC1D8 (ENSPREG00000002317) NEB (ENSPREG00000002445) arl5a (ENSPREG00000002806) CACNB4 (ENSPREG00000002834) stam2 (ENSPREG00000002873) hacd2 (ENSPREG00000002994) ##22 adcy5 (ENSPREG00000003040) sec22a (ENSPREG00000003109) pdia5 (ENSPREG00000003118) SEMA5B (ENSPREG00000003186) slc49a4 (ENSPREG00000003304) hspbap1 (ENSPREG00000003338) slc15a2 (ENSPREG00000003360) cyp27a3 (ENSPREG00000003432) eaf2 (ENSPREG00000003447) si:dkey-91i10.2 (ENSPREG00000003473) tsn (ENSPREG00000003481) FAM124A (ENSPREG00000003510) serpine3 (ENSPREG00000003526) ints6 (ENSPREG00000003591) wdfy2 (ENSPREG00000003639) Platyfish MODERN SPECIES 21 ENSXMAG00000002345 ENSXMAG00000025926 ENSXMAG00000024246 ENSXMAG00000019078 ENSXMAG00000019084 LONRF2 (ENSXMAG00000019107) ENSXMAG00000019116 ENSXMAG00000028733 PDCL3 (ENSXMAG00000024770) TBC1D8 (ENSXMAG00000019137) NEB (ENSXMAG00000019159) arl5a (ENSXMAG00000007983) ENSXMAG00000024250 CACNB4 (ENSXMAG00000007962) stam2 (ENSXMAG00000012271) hacd2 (ENSXMAG00000012243) ##22 adcy5 (ENSXMAG00000000770) sec22a (ENSXMAG00000000784) pdia5 (ENSXMAG00000000792) SEMA5B (ENSXMAG00000000810) ENSXMAG00000021992 ENSXMAG00000022503 ENSXMAG00000025225 slc49a4 (ENSXMAG00000000837) hspbap1 (ENSXMAG00000024217) slc15a2 (ENSXMAG00000000861) cyp27a3 (ENSXMAG00000000920) eaf2 (ENSXMAG00000026448) si:dkey-91i10.2 (ENSXMAG00000000967) tsn (ENSXMAG00000022538) FAM124A (ENSXMAG00000028967) NAME_4 ANCESTRAL SPECIES 68 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00960000186941 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Sheepshead minnow MODERN SPECIES 476 ENSCVAG00000014349 ENSCVAG00000014334 ENSCVAG00000014317 ENSCVAG00000014307 ENSCVAG00000014289 casq1b (ENSCVAG00000014258) ENSCVAG00000014106 CFAP91 (ENSCVAG00000014081) nr1i2 (ENSCVAG00000014052) gsk3ba (ENSCVAG00000014037) GPR156 (ENSCVAG00000014000) ENSCVAG00000013964 LRRC58 (ENSCVAG00000013956) fstl1b (ENSCVAG00000013938) ENSCVAG00000013883 hacd2 (ENSCVAG00000013850) ##22 ENSCVAG00000013794 gja8a (ENSCVAG00000013777) gja5a (ENSCVAG00000013772) acp6 (ENSCVAG00000013763) Mummichog MODERN SPECIES 2252 ENSFHEG00000016885 ENSFHEG00000016823 ENSFHEG00000016817 MAP4K4 (ENSFHEG00000016776) LONRF2 (ENSFHEG00000016740) ENSFHEG00000016728 ENSFHEG00000016707 PDCL3 (ENSFHEG00000016702) TBC1D8 (ENSFHEG00000016677) ENSFHEG00000016611 NEB (ENSFHEG00000016597) arl5a (ENSFHEG00000016231) CACNB4 (ENSFHEG00000016221) stam2 (ENSFHEG00000016210) hacd2 (ENSFHEG00000000574) ##22 adcy5 (ENSFHEG00000016114) sec22a (ENSFHEG00000015970) pdia5 (ENSFHEG00000015960) SEMA5B (ENSFHEG00000015846) slc49a4 (ENSFHEG00000015726) hspbap1 (ENSFHEG00000000380) slc15a2 (ENSFHEG00000015672) cyp27a3 (ENSFHEG00000015573) eaf2 (ENSFHEG00000015560) si:dkey-91i10.2 (ENSFHEG00000015539) tsn (ENSFHEG00000015531) FAM124A (ENSFHEG00000015510) serpine3 (ENSFHEG00000015502) ints6 (ENSFHEG00000015434) wdfy2 (ENSFHEG00000015317) Oryzias ANCESTRAL SPECIES 10 ENSGT00940000178691 ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b.d ENSGT01090000259985.b.b.b.a.b.c ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00970000193758 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Oryzias_a ANCESTRAL SPECIES 46 ENSGT00940000178691 ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b.d ENSGT01090000259985.b.b.b.a.b.c ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00970000193758 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Japanese Medaka HdrR MODERN SPECIES 13 ENSORLG00000009213 ENSORLG00000009266 LONRF2 (ENSORLG00000009293) ENSORLG00000023781 ENSORLG00000009303 PDCL3 (ENSORLG00000009325) ENSORLG00000022389 TBC1D8 (ENSORLG00000009369) ENSORLG00000025648 ENSORLG00000029464 ENSORLG00000025341 ENSORLG00000009639 arl5a (ENSORLG00000009664) CACNB4 (ENSORLG00000024066) stam2 (ENSORLG00000009689) hacd2 (ENSORLG00000009719) ##22 adcy5 (ENSORLG00000009753) sec22a (ENSORLG00000009807) pdia5 (ENSORLG00000009839) ENSORLG00000025904 SEMA5B (ENSORLG00000009896) slc49a4 (ENSORLG00000009930) hspbap1 (ENSORLG00000009946) slc15a2 (ENSORLG00000009993) cyp27a3 (ENSORLG00000010014) eaf2 (ENSORLG00000010034) si:dkey-91i10.2 (ENSORLG00000025250) tsn (ENSORLG00000010049) FAM124A (ENSORLG00000023012) ENSORLG00000027293 serpine3 (ENSORLG00000010070) Chinese medaka MODERN SPECIES 893 ENSOSIG00000019314 ENSOSIG00000019306 ENSOSIG00000019305 ENSOSIG00000019304 ENSOSIG00000019299 ENSOSIG00000019292 ENSOSIG00000019043 LONRF2 (ENSOSIG00000019009) ENSOSIG00000018996 PDCL3 (ENSOSIG00000018994) TBC1D8 (ENSOSIG00000018987) NEB (ENSOSIG00000018414) arl5a (ENSOSIG00000018187) CACNB4 (ENSOSIG00000017617) stam2 (ENSOSIG00000017555) hacd2 (ENSOSIG00000017534) ##22 adcy5 (ENSOSIG00000016118) sec22a (ENSOSIG00000016096) pdia5 (ENSOSIG00000014796) SEMA5B (ENSOSIG00000014210) slc49a4 (ENSOSIG00000014203) slc15a2 (ENSOSIG00000012930) cyp27a3 (ENSOSIG00000012129) eaf2 (ENSOSIG00000012118) tsn (ENSOSIG00000012116) FAM124A (ENSOSIG00000012113) serpine3 (ENSOSIG00000012111) ints6 (ENSOSIG00000010387) wdfy2 (ENSOSIG00000010074) dhrs12 (ENSOSIG00000009906) olig2 (ENSOSIG00000009901) Oryzias_b ANCESTRAL SPECIES 10 ENSGT00940000178691 ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b.d ENSGT01090000259985.b.b.b.a.b.c ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00970000193758 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Javanese ricefish MODERN SPECIES 13 ENSOJAG00000023575 ENSOJAG00000023566 ENSOJAG00000023559 ENSOJAG00000023544 ENSOJAG00000023529 MAP4K4 (ENSOJAG00000023340) ENSOJAG00000023167 ENSOJAG00000023151 PDCL3 (ENSOJAG00000023142) ENSOJAG00000023138 TBC1D8 (ENSOJAG00000023120) ENSOJAG00000022657 arl5a (ENSOJAG00000022605) CACNB4 (ENSOJAG00000022497) stam2 (ENSOJAG00000022370) hacd2 (ENSOJAG00000022341) ##22 adcy5 (ENSOJAG00000022023) sec22a (ENSOJAG00000021910) pdia5 (ENSOJAG00000021691) SEMA5B (ENSOJAG00000021249) slc49a4 (ENSOJAG00000021169) hspbap1 (ENSOJAG00000021111) slc15a2 (ENSOJAG00000020713) cyp27a3 (ENSOJAG00000020575) eaf2 (ENSOJAG00000020558) si:dkey-91i10.2 (ENSOJAG00000020552) tsn (ENSOJAG00000020539) FAM124A (ENSOJAG00000020537) serpine3 (ENSOJAG00000020535) ints6 (ENSOJAG00000020377) wdfy2 (ENSOJAG00000020217) Indian medaka MODERN SPECIES 18 ENSOMEG00000018595 ENSOMEG00000018561 ENSOMEG00000018459 ENSOMEG00000018317 ENSOMEG00000018288 MAP4K4 (ENSOMEG00000018134) LONRF2 (ENSOMEG00000017796) ENSOMEG00000017777 PDCL3 (ENSOMEG00000017760) TBC1D8 (ENSOMEG00000017709) ENSOMEG00000017591 NEB (ENSOMEG00000017518) arl5a (ENSOMEG00000017228) CACNB4 (ENSOMEG00000000427) stam2 (ENSOMEG00000017132) hacd2 (ENSOMEG00000017075) ##22 adcy5 (ENSOMEG00000017031) sec22a (ENSOMEG00000016874) pdia5 (ENSOMEG00000016828) SEMA5B (ENSOMEG00000016740) slc49a4 (ENSOMEG00000016617) hspbap1 (ENSOMEG00000016593) slc15a2 (ENSOMEG00000016561) cyp27a3 (ENSOMEG00000016478) eaf2 (ENSOMEG00000016422) si:dkey-91i10.2 (ENSOMEG00000016381) tsn (ENSOMEG00000016335) FAM124A (ENSOMEG00000016312) serpine3 (ENSOMEG00000016276) ints6 (ENSOMEG00000016195) wdfy2 (ENSOMEG00000016135) Ovalentaria_B ANCESTRAL SPECIES 12 ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.b.b.b ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000169295 Pomacentridae ANCESTRAL SPECIES 135 ENSGT00940000158407 ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.b.b.b ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a.b ENSGT00950000182905.a.a.a.a.a.a.a.b ENSGT00950000182905.a.a.a.a.a.a.a.a ENSGT00390000017724.a.b Pomacentridae_A ANCESTRAL SPECIES 148 ENSGT00940000158407 ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.b.b.b ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a.a.b Amphiprion ANCESTRAL SPECIES 52 ENSGT01000000214434.B.a.a ENSGT00940000165301.a ENSGT00390000011515 ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.b.b.b ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182912.b.a.a.b.b.a.b.a.b.b.b.a.a.a.a.b.a.b.e Orange clownfish MODERN SPECIES 3 zgc:172295 (ENSAPEG00000002279) ENSAPEG00000002198 nifk (ENSAPEG00000002123) ENSAPEG00000002087 ENSAPEG00000002031 ENSAPEG00000001809 ENSAPEG00000001771 ENSAPEG00000001752 PDCL3 (ENSAPEG00000001738) TBC1D8 (ENSAPEG00000001672) ENSAPEG00000001640 NEB (ENSAPEG00000001049) arl5a (ENSAPEG00000000995) CACNB4 (ENSAPEG00000000953) stam2 (ENSAPEG00000000880) hacd2 (ENSAPEG00000000828) ##22 adcy5 (ENSAPEG00000000760) sec22a (ENSAPEG00000000731) ENSAPEG00000000718 pdia5 (ENSAPEG00000000645) ENSAPEG00000000506 SEMA5B (ENSAPEG00000000420) ENSAPEG00000000394 slc49a4 (ENSAPEG00000000305) hspbap1 (ENSAPEG00000024246) slc15a2 (ENSAPEG00000024226) ENSAPEG00000024196 ENSAPEG00000024178 cyp27a3 (ENSAPEG00000024170) ENSAPEG00000024165 ENSAPEG00000024163 Clown anemonefish MODERN SPECIES 1374 stam2 (ENSAOCG00000003751) hacd2 (ENSAOCG00000003758) ##22 adcy5 (ENSAOCG00000003776) sec22a (ENSAOCG00000003786) pdia5 (ENSAOCG00000003799) SEMA5B (ENSAOCG00000003816) Spiny chromis MODERN SPECIES 2248 stam2 (ENSAPOG00000003629) hacd2 (ENSAPOG00000003665) ##22 Bicolor damselfish MODERN SPECIES 908 ENSSPAG00000016037 PDCL3 (ENSSPAG00000016008) TBC1D8 (ENSSPAG00000015955) ENSSPAG00000015920 ENSSPAG00000015909 ENSSPAG00000015831 ENSSPAG00000015782 arl5a (ENSSPAG00000015760) CACNB4 (ENSSPAG00000015726) stam2 (ENSSPAG00000015651) hacd2 (ENSSPAG00000015634) ##22 ENSSPAG00000015612 Cichlidae ANCESTRAL SPECIES 14 ENSGT01090000260082.d.a.b.o.b ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000169295 Pseudocrenilabrinae ANCESTRAL SPECIES 15 ENSGT01090000260082.d.a.b.o.b ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Pseudocrenilabrinae_A ANCESTRAL SPECIES 40 ENSGT01090000260082.d.a.b.o.b ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Haplochromini ANCESTRAL SPECIES 43 ENSGT01090000260082.d.a.b.o.b ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Haplochromini_A ANCESTRAL SPECIES 45 ENSGT01090000260082.d.a.b.o.b ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 P. nyererei MODERN SPECIES 470 ENSPNYG00000011510 ENSPNYG00000011542 ENSPNYG00000011589 ENSPNYG00000011613 PDCL3 (ENSPNYG00000011629) TBC1D8 (ENSPNYG00000011684) ENSPNYG00000011749 ENSPNYG00000011810 ENSPNYG00000011838 arl5a (ENSPNYG00000011933) CACNB4 (ENSPNYG00000011945) stam2 (ENSPNYG00000011970) hacd2 (ENSPNYG00000011991) ##22 adcy5 (ENSPNYG00000012024) sec22a (ENSPNYG00000012069) pdia5 (ENSPNYG00000012103) SEMA5B (ENSPNYG00000012145) slc49a4 (ENSPNYG00000012179) hspbap1 (ENSPNYG00000012219) slc15a2 (ENSPNYG00000012242) cyp27a3 (ENSPNYG00000012298) eaf2 (ENSPNYG00000012325) si:dkey-91i10.2 (ENSPNYG00000012369) tsn (ENSPNYG00000012396) FAM124A (ENSPNYG00000012424) serpine3 (ENSPNYG00000012433) ints6 (ENSPNYG00000012467) wdfy2 (ENSPNYG00000012527) Haplochromini_B ANCESTRAL SPECIES 36 ENSGT01090000260082.d.a.b.o.b ENSGT00940000155107.b.b ENSGT01090000259985.b.a.a.a ENSGT01090000259985.b.a.a.b ENSGT01090000259985.b.b.b.a.b ENSGT01090000259985.b.b.b.a.a.a ENSGT00940000155063.a.a ENSGT00440000033329.b.a.a ENSGT00940000175639 ENSGT00940000154295 ENSGT00940000158977 ENSGT00940000154533.a.a.a ENSGT00940000154714 ENSGT00950000182837.b.b.c.a ENSGT00940000157055 ENSGT00530000062962.a.a ##22 ENSGT00940000158054.d ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00590000083134.a.a ENSGT00940000160941 ENSGT00390000016655.a.a.b ENSGT00940000158527 Eastern happy MODERN SPECIES 7 ENSACLG00000018548 ENSACLG00000018582 ENSACLG00000018799 ENSACLG00000018836 ENSACLG00000018854 LONRF2 (ENSACLG00000019361) ENSACLG00000019408 PDCL3 (ENSACLG00000019421) TBC1D8 (ENSACLG00000019431) NEB (ENSACLG00000019534) ENSACLG00000019900 ENSACLG00000019939 arl5a (ENSACLG00000019945) CACNB4 (ENSACLG00000019964) stam2 (ENSACLG00000020034) hacd2 (ENSACLG00000020082) ##22 adcy5 (ENSACLG00000020115) ENSACLG00000020139 sec22a (ENSACLG00000020148) ENSACLG00000020184 pdia5 (ENSACLG00000020190) ENSACLG00000020244 SEMA5B (ENSACLG00000020287) ENSACLG00000020552 slc49a4 (ENSACLG00000020563) hspbap1 (ENSACLG00000020638) slc15a2 (ENSACLG00000020671) cyp27a3 (ENSACLG00000020711) eaf2 (ENSACLG00000020730) si:dkey-91i10.2 (ENSACLG00000020803) tsn (ENSACLG00000020831) Zebra mbuna MODERN SPECIES 1098 ENSMZEG00005019130 ENSMZEG00005019115 ENSMZEG00005019100 ENSMZEG00005019077 ENSMZEG00005018991 LONRF2 (ENSMZEG00005018961) ENSMZEG00005018959 PDCL3 (ENSMZEG00005018953) TBC1D8 (ENSMZEG00005018948) ENSMZEG00005018946 ENSMZEG00005018943 NEB (ENSMZEG00005018907) arl5a (ENSMZEG00005018866) CACNB4 (ENSMZEG00005018844) stam2 (ENSMZEG00005018838) hacd2 (ENSMZEG00005018832) ##22 adcy5 (ENSMZEG00005018813) sec22a (ENSMZEG00005018800) pdia5 (ENSMZEG00005018787) SEMA5B (ENSMZEG00005018764) slc49a4 (ENSMZEG00005018745) hspbap1 (ENSMZEG00005018742) slc15a2 (ENSMZEG00005018736) cyp27a3 (ENSMZEG00005018730) eaf2 (ENSMZEG00005018727) si:dkey-91i10.2 (ENSMZEG00005018721) tsn (ENSMZEG00005018715) FAM124A (ENSMZEG00005018713) serpine3 (ENSMZEG00005018707) ints6 (ENSMZEG00005018699) wdfy2 (ENSMZEG00005018694) Burton s mouthbrooder MODERN SPECIES 549 PDCL3 (ENSHBUG00000012683) TBC1D8 (ENSHBUG00000012658) ENSHBUG00000012582 ENSHBUG00000012490 ENSHBUG00000012438 arl5a (ENSHBUG00000011659) CACNB4 (ENSHBUG00000011640) stam2 (ENSHBUG00000000315) hacd2 (ENSHBUG00000011595) ##22 adcy5 (ENSHBUG00000011552) sec22a (ENSHBUG00000000312) pdia5 (ENSHBUG00000011423) SEMA5B (ENSHBUG00000011332) slc49a4 (ENSHBUG00000011282) hspbap1 (ENSHBUG00000011249) slc15a2 (ENSHBUG00000011233) cyp27a3 (ENSHBUG00000011199) eaf2 (ENSHBUG00000011171) Nile tilapia MODERN SPECIES 7 RDX (ENSONIG00000015749) ENSONIG00000033092 ENSONIG00000016996 ENSONIG00000016997 ENSONIG00000016999 ENSONIG00000017002 MAP4K4 (ENSONIG00000017004) ENSONIG00000017014 ENSONIG00000027335 PDCL3 (ENSONIG00000036855) TBC1D8 (ENSONIG00000017018) NEB (ENSONIG00000017020) arl5a (ENSONIG00000033932) CACNB4 (ENSONIG00000017022) stam2 (ENSONIG00000017025) hacd2 (ENSONIG00000030290) ##22 adcy5 (ENSONIG00000017027) sec22a (ENSONIG00000017033) pdia5 (ENSONIG00000017035) SEMA5B (ENSONIG00000017040) slc49a4 (ENSONIG00000017043) hspbap1 (ENSONIG00000017046) slc15a2 (ENSONIG00000017047) cyp27a3 (ENSONIG00000017055) eaf2 (ENSONIG00000017058) tsn (ENSONIG00000029221) FAM124A (ENSONIG00000042893) serpine3 (ENSONIG00000017064) ints6 (ENSONIG00000017067) wdfy2 (ENSONIG00000017074) dhrs12 (ENSONIG00000017077) Midas cichlid MODERN SPECIES 789 ENSACIG00000003820 ENSACIG00000003791 PDCL3 (ENSACIG00000003727) TBC1D8 (ENSACIG00000003673) ENSACIG00000003649 ENSACIG00000003272 arl5a (ENSACIG00000003228) CACNB4 (ENSACIG00000003200) stam2 (ENSACIG00000003170) hacd2 (ENSACIG00000003139) ##22 adcy5 (ENSACIG00000003088) sec22a (ENSACIG00000003018) ENSACIG00000003004 pdia5 (ENSACIG00000002964) SEMA5B (ENSACIG00000002905) slc49a4 (ENSACIG00000002881) hspbap1 (ENSACIG00000002845) slc15a2 (ENSACIG00000002742) cyp27a3 (ENSACIG00000002665) Sarcopterygii ANCESTRAL SPECIES 149 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00950000182905.a.a.a.a.a.a ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.a ENSGT00940000154817.b.b.b Coelacanth MODERN SPECIES 4273 HACD2 (ENSLACG00000000354) ##22 Tetrapoda ANCESTRAL SPECIES 32 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000167567 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213 Anura ANCESTRAL SPECIES 93 ENSGT00390000008042.A.b ENSGT00390000015352 ENSGT00940000154846.a.b ENSGT00390000006225 ENSGT00940000160618 ENSGT00390000006925 ENSGT00390000009029 ENSGT00530000062962.a.a ##22 ENSGT00390000007364 ENSGT00940000158837 ENSGT00940000154578.A.d ENSGT00940000154311.a.b.n.b ENSGT00940000154311.a.b.n.a.a ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029.h ENSGT00930000151029.g ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT01090000259987.b.b.a.b.a Leishan spiny toad MODERN SPECIES 10 ENSLLEG00000015631 ENSLLEG00000015703 ENSLLEG00000015790 SLC12A8 (ENSLLEG00000015903) ENSLLEG00000016302 ENSLLEG00000016750 ENSLLEG00000016788 SNX4 (ENSLLEG00000016884) ENSLLEG00000017643 ENSLLEG00000017675 ENSLLEG00000017713 ENSLLEG00000017737 ENSLLEG00000017777 ENSLLEG00000017826 ENSLLEG00000018056 ENSLLEG00000018374 ##22 ENSLLEG00000018594 FAIM (ENSLLEG00000018655) ENSLLEG00000018916 PARP9 (ENSLLEG00000018944) ENSLLEG00000019024 ENSLLEG00000019058 ENSLLEG00000019167 ENSLLEG00000019207 ENSLLEG00000019379 ENSLLEG00000019411 ENSLLEG00000019592 ENSLLEG00000019618 STEAP3 (ENSLLEG00000019767) ENSLLEG00000019887 ENSLLEG00000019923 Frog MODERN SPECIES 9 ccdc93 (ENSXETG00000014940) insig2 (ENSXETG00000041409) ENSXETG00000043053 en1 (ENSXETG00000046176) ENSXETG00000048132 ENSXETG00000047501 ENSXETG00000044865 steap3 (ENSXETG00000033379) c2orf76 (ENSXETG00000049047) dbi (ENSXETG00000045826) tmem37 (ENSXETG00000042949) SCTR (ENSXETG00000040455) cfap221 (ENSXETG00000046793) esyt3 (ENSXETG00000042276) cep70 (ENSXETG00000047914) hacd2 (ENSXETG00000040752) ##22 faim (ENSXETG00000007986) ENSXETG00000042381 ENSXETG00000007985 dtx3l (ENSXETG00000042953) ENSXETG00000045130 parp14.2 (ENSXETG00000023399) ENSXETG00000049302 ENSXETG00000039180 parp14.2 (ENSXETG00000036716) lmln (ENSXETG00000036038) ENSXETG00000049409 ENSXETG00000044201 osbpl11 (ENSXETG00000023393) tgfbr2l (ENSXETG00000041339) ENSXETG00000043556 Amniota ANCESTRAL SPECIES 6 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000159891 ENSGT00390000002689 ENSGT00940000161168 ENSGT00940000156832 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213 Sauria ANCESTRAL SPECIES ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213 Lepidosauria ANCESTRAL SPECIES 7 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000167567 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000156832 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213 Episquamata ANCESTRAL SPECIES ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000167567 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213 ENSGT00940000159862 Laterata ANCESTRAL SPECIES 2 ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A.w ENSGT00940000167567 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213 ENSGT00940000159862 Common wall lizard MODERN SPECIES ENSPMRG00000006291 ENSPMRG00000006282 SNX4 (ENSPMRG00000006233) ZNF148 (ENSPMRG00000006215) SLC12A8 (ENSPMRG00000006204) ENSPMRG00000006198 ENSPMRG00000006187 ITGB5 (ENSPMRG00000006175) UMPS (ENSPMRG00000006164) KALRN (ENSPMRG00000003634) ENSPMRG00000003200 ENSPMRG00000003197 CCDC14 (ENSPMRG00000003188) ENSPMRG00000003177 MYLK (ENSPMRG00000001667) HACD2 (ENSPMRG00000001136) ##22 ADCY5 (ENSPMRG00000000497) SEC22A (ENSPMRG00000000118) PDIA5 (ENSPMRG00000000097) SEMA5B (ENSPMRG00000021933) SLC49A4 (ENSPMRG00000021859) HSPBAP1 (ENSPMRG00000021852) SLC15A2 (ENSPMRG00000021823) EAF2 (ENSPMRG00000021806) IQCB1 (ENSPMRG00000021723) ENSPMRG00000021694 TSN (ENSPMRG00000021686) CLASP1 (ENSPMRG00000020418) TFCP2L1 (ENSPMRG00000020006) ENSPMRG00000019940 INHBB (ENSPMRG00000019927) Argentine black and white tegu MODERN SPECIES 27 LMLN (ENSSMRG00000014344) ENSSMRG00000014343 OSBPL11 (ENSSMRG00000014342) ENSSMRG00000014340 SNX4 (ENSSMRG00000014339) ZNF148 (ENSSMRG00000014338) SLC12A8 (ENSSMRG00000014337) HEG1 (ENSSMRG00000014336) ITGB5 (ENSSMRG00000014335) UMPS (ENSSMRG00000014334) ENSSMRG00000013405 ENSSMRG00000012402 ENSSMRG00000012370 CCDC14 (ENSSMRG00000012369) MYLK (ENSSMRG00000012348) HACD2 (ENSSMRG00000012334) ##22 ADCY5 (ENSSMRG00000012329) SEC22A (ENSSMRG00000012292) PDIA5 (ENSSMRG00000012287) SEMA5B (ENSSMRG00000012285) SLC49A4 (ENSSMRG00000012215) HSPBAP1 (ENSSMRG00000012213) SLC15A2 (ENSSMRG00000012036) ENSSMRG00000011969 EAF2 (ENSSMRG00000011962) IQCB1 (ENSSMRG00000011954) ENSSMRG00000011934 TSN (ENSSMRG00000011931) CLASP1 (ENSSMRG00000011922) TFCP2L1 (ENSSMRG00000011914) GLI2 (ENSSMRG00000011875) Toxicofera ANCESTRAL SPECIES 10 ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213 ENSGT00940000159862 Elapidae ANCESTRAL SPECIES ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213.e ENSGT00940000159862 Elapidae_a ANCESTRAL SPECIES 5 ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213.e ENSGT00940000159862 Acanthophiinae ANCESTRAL SPECIES 7 ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213.e ENSGT00940000159862 Eastern brown snake MODERN SPECIES 37 OSBPL11 (ENSPTXG00000008342) ENSPTXG00000008343 SNX4 (ENSPTXG00000008345) ZNF148 (ENSPTXG00000008346) SLC12A8 (ENSPTXG00000008347) ENSPTXG00000008348 ENSPTXG00000008349 ITGB5 (ENSPTXG00000008350) UMPS (ENSPTXG00000008351) ENSPTXG00000008352 ENSPTXG00000008353 ENSPTXG00000008357 ENSPTXG00000008361 CCDC14 (ENSPTXG00000008362) MYLK (ENSPTXG00000008373) HACD2 (ENSPTXG00000008555) ##22 ADCY5 (ENSPTXG00000008563) SEC22A (ENSPTXG00000008566) PDIA5 (ENSPTXG00000008568) SEMA5B (ENSPTXG00000008573) SLC49A4 (ENSPTXG00000006336) HSPBAP1 (ENSPTXG00000006337) SLC15A2 (ENSPTXG00000006338) EAF2 (ENSPTXG00000006360) IQCB1 (ENSPTXG00000006361) ENSPTXG00000006362 TSN (ENSPTXG00000006363) CLASP1 (ENSPTXG00000006368) TFCP2L1 (ENSPTXG00000006919) GLI2 (ENSPTXG00000006923) INHBB (ENSPTXG00000006925) Mainland tiger snake MODERN SPECIES 12 ENSNSUG00000010253 ITGB5 (ENSNSUG00000010254) ENSNSUG00000010300 UMPS (ENSNSUG00000010301) ENSNSUG00000010308 ENSNSUG00000010309 ENSNSUG00000010310 ENSNSUG00000010317 ENSNSUG00000010323 ENSNSUG00000010330 CCDC14 (ENSNSUG00000010331) ENSNSUG00000010340 ENSNSUG00000010341 ENSNSUG00000010342 ENSNSUG00000010345 HACD2 (ENSNSUG00000010346) ##22 ADCY5 (ENSNSUG00000010347) SEC22A (ENSNSUG00000010350) PDIA5 (ENSNSUG00000010351) SEMA5B (ENSNSUG00000010389) SLC49A4 (ENSNSUG00000010395) HSPBAP1 (ENSNSUG00000010444) SLC15A2 (ENSNSUG00000010448) EAF2 (ENSNSUG00000010453) IQCB1 (ENSNSUG00000010456) TSN (ENSNSUG00000010457) CLASP1 (ENSNSUG00000010461) TFCP2L1 (ENSNSUG00000010923) GLI2 (ENSNSUG00000010924) INHBB (ENSNSUG00000010945) RALB (ENSNSUG00000010946) Blue-lipped sea krait MODERN SPECIES 8965 ENSLLTG00000012556 HACD2 (ENSLLTG00000012546) ##22 Indian cobra MODERN SPECIES ENSNNAG00000016743 OSBPL11 (ENSNNAG00000016756) ENSNNAG00000016779 SNX4 (ENSNNAG00000016790) ZNF148 (ENSNNAG00000016810) SLC12A8 (ENSNNAG00000016827) HEG1 (ENSNNAG00000016862) ITGB5 (ENSNNAG00000016910) UMPS (ENSNNAG00000016945) KALRN (ENSNNAG00000017243) ENSNNAG00000018413 CCDC14 (ENSNNAG00000018418) ENSNNAG00000018424 MYLK (ENSNNAG00000018430) ENSNNAG00000018436 HACD2 (ENSNNAG00000018439) ##22 ADCY5 (ENSNNAG00000018472) SEC22A (ENSNNAG00000018574) PDIA5 (ENSNNAG00000003330) SEMA5B (ENSNNAG00000003379) SLC49A4 (ENSNNAG00000003477) HSPBAP1 (ENSNNAG00000003505) SLC15A2 (ENSNNAG00000003575) EAF2 (ENSNNAG00000003726) IQCB1 (ENSNNAG00000003745) TSN (ENSNNAG00000003831) CLASP1 (ENSNNAG00000004496) TFCP2L1 (ENSNNAG00000013087) ENSNNAG00000013162 ENSNNAG00000013261 ENSNNAG00000013266 Lizard MODERN SPECIES SNX4 (ENSACAG00000029393) ENSACAG00000038815 ZNF148 (ENSACAG00000010047) ENSACAG00000010111 ENSACAG00000010139 ITGB5 (ENSACAG00000010168) ENSACAG00000010326 ENSACAG00000041561 KALRN (ENSACAG00000010381) ENSACAG00000044437 ENSACAG00000029257 CCDC14 (ENSACAG00000010616) ENSACAG00000010638 ENSACAG00000035341 MYLK (ENSACAG00000010640) HACD2 (ENSACAG00000010728) ##22 ADCY5 (ENSACAG00000010774) SEC22A (ENSACAG00000011029) PDIA5 (ENSACAG00000011064) ENSACAG00000045091 ENSACAG00000043603 SLC35F5 (ENSACAG00000002712) ACTR3 (ENSACAG00000002564) ENSACAG00000026449 ENSACAG00000039289 DPP10 (ENSACAG00000002171) ENSACAG00000041076 ENSACAG00000039478 ENSACAG00000039374 DDX18 (ENSACAG00000002045) CCDC93 (ENSACAG00000001798) tuatara MODERN SPECIES 633 LMLN (ENSSPUG00000016323) ENSSPUG00000016406 OSBPL11 (ENSSPUG00000016420) ENSSPUG00000016426 SNX4 (ENSSPUG00000016432) ZNF148 (ENSSPUG00000016439) SLC12A8 (ENSSPUG00000016445) HEG1 (ENSSPUG00000016460) ITGB5 (ENSSPUG00000016474) ENSSPUG00000016493 ENSSPUG00000016529 ENSSPUG00000016660 ENSSPUG00000016691 CCDC14 (ENSSPUG00000016713) MYLK (ENSSPUG00000016724) HACD2 (ENSSPUG00000016748) ##22 ADCY5 (ENSSPUG00000016833) SEC22A (ENSSPUG00000017100) PDIA5 (ENSSPUG00000017114) SEMA5B (ENSSPUG00000017140) SLC49A4 (ENSSPUG00000017168) HSPBAP1 (ENSSPUG00000017240) SLC15A2 (ENSSPUG00000017362) EAF2 (ENSSPUG00000017376) IQCB1 (ENSSPUG00000017410) TSN (ENSSPUG00000017518) NIFK (ENSSPUG00000017537) CLASP1 (ENSSPUG00000017573) TFCP2L1 (ENSSPUG00000017607) GLI2 (ENSSPUG00000017627) ENSSPUG00000017634 Archelosauria ANCESTRAL SPECIES 8 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213 Archosauria ANCESTRAL SPECIES 6 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213 Aves ANCESTRAL SPECIES 8 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213.c Neognathae ANCESTRAL SPECIES 6 ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213.c Galloanserae ANCESTRAL SPECIES 7 ENSGT00940000154311.a.b.l.b ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159862 Anatidae ANCESTRAL SPECIES 10 ENSGT00940000154311.a.b.l.b ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159862 ENSGT00940000155984 Pink-footed goose MODERN SPECIES 147 CCDC14 (ENSABRG00000018060) MYLK (ENSABRG00000018031) HACD2 (ENSABRG00000018022) ##22 ADCY5 (ENSABRG00000018007) SEC22A (ENSABRG00000017995) PDIA5 (ENSABRG00000017921) SEMA5B (ENSABRG00000017885) SLC49A4 (ENSABRG00000017883) HSPBAP1 (ENSABRG00000017882) SLC15A2 (ENSABRG00000017871) EAF2 (ENSABRG00000017869) IQCB1 (ENSABRG00000017862) TSN (ENSABRG00000017857) NIFK (ENSABRG00000017848) CLASP1 (ENSABRG00000001120) TFCP2L1 (ENSABRG00000000521) ENSABRG00000000504 INHBB (ENSABRG00000000445) Duck MODERN SPECIES 25 ENSAPLG00000010062 LMLN (ENSAPLG00000009923) ENSAPLG00000009748 OSBPL11 (ENSAPLG00000009471) ENSAPLG00000009253 SNX4 (ENSAPLG00000009074) ZNF148 (ENSAPLG00000008859) SLC12A8 (ENSAPLG00000008520) HEG1 (ENSAPLG00000021885) ENSAPLG00000008199 ITGB5 (ENSAPLG00000007419) UMPS (ENSAPLG00000007365) KALRN (ENSAPLG00000006373) CCDC14 (ENSAPLG00000006264) MYLK (ENSAPLG00000005685) HACD2 (ENSAPLG00000016518) ##22 ADCY5 (ENSAPLG00000005419) SEC22A (ENSAPLG00000005344) PDIA5 (ENSAPLG00000005015) SEMA5B (ENSAPLG00000004815) SLC49A4 (ENSAPLG00000004155) HSPBAP1 (ENSAPLG00000003995) SLC15A2 (ENSAPLG00000003151) EAF2 (ENSAPLG00000003048) IQCB1 (ENSAPLG00000002873) TSN (ENSAPLG00000030910) NIFK (ENSAPLG00000024403) CLASP1 (ENSAPLG00000002082) TFCP2L1 (ENSAPLG00000015648) ENSAPLG00000015141 INHBB (ENSAPLG00000016916) Phasianidae ANCESTRAL SPECIES 8 ENSGT00940000154311.a.b.l.b ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159862 Phasianidae_b ANCESTRAL SPECIES 8 ENSGT00940000154311.a.b.l.b ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159862 ENSGT00940000155984 Turkey MODERN SPECIES 27 ENSMGAG00000011889 ENSMGAG00000011917 ENSMGAG00000022243 ENSMGAG00000011953 ENSMGAG00000017830 ENSMGAG00000011956 ENSMGAG00000011968 ENSMGAG00000011973 ENSMGAG00000012011 ENSMGAG00000011982 ENSMGAG00000012014 ENSMGAG00000012023 ENSMGAG00000012032 ENSMGAG00000020362 ENSMGAG00000012056 ENSMGAG00000012075 ##22 ENSMGAG00000012084 ENSMGAG00000012109 ENSMGAG00000012096 ENSMGAG00000019481 ENSMGAG00000012119 ENSMGAG00000020504 ITGB5 (ENSMGAG00000012123) ENSMGAG00000012150 ENSMGAG00000020274 ENSMGAG00000012137 ENSMGAG00000012153 ENSMGAG00000012168 ENSMGAG00000012186 ENSMGAG00000012177 ENSMGAG00000012242 Chicken MODERN SPECIES 36 ENSGALG00010020557 LMLN (ENSGALG00010020535) GPD1L2 (ENSGALG00010020525) OSBPL11 (ENSGALG00010020497) ENSGALG00010020453 SNX4 (ENSGALG00010020437) ZNF148 (ENSGALG00010020429) SLC12A8 (ENSGALG00010020385) HEG1 (ENSGALG00010020284) ENSGALG00010020087 ITGB5 (ENSGALG00010019996) UMPS (ENSGALG00010019985) KALRN (ENSGALG00010019932) CCDC14 (ENSGALG00010019854) MYLK (ENSGALG00010018627) HACD2 (ENSGALG00010018544) ##22 ADCY6 (ENSGALG00010018531) SEC22A (ENSGALG00010018524) PDIA5 (ENSGALG00010021338) SEMA5B (ENSGALG00010018458) HSPBAP1 (ENSGALG00010018434) SLC15A2 (ENSGALG00010018413) EAF2 (ENSGALG00010018514) IQCB1 (ENSGALG00010018470) ARHGEF1 (ENSGALG00010021793) TSN (ENSGALG00010021772) NIFK (ENSGALG00010021759) CLASP1 (ENSGALG00010021749) TFCP2L1 (ENSGALG00010021716) GLI2 (ENSGALG00010018968) INHBB (ENSGALG00010018937) Japanese quail MODERN SPECIES 25 ENSCJPG00005021038 LMLN (ENSCJPG00005021039) ENSCJPG00005021040 OSBPL11 (ENSCJPG00005021041) ENSCJPG00005021042 SNX4 (ENSCJPG00005021043) ZNF148 (ENSCJPG00005021044) SLC12A8 (ENSCJPG00005021045) HEG1 (ENSCJPG00005021046) ITGB5 (ENSCJPG00005021048) UMPS (ENSCJPG00005021049) ENSCJPG00005021050 ENSCJPG00005021051 CCDC14 (ENSCJPG00005021062) MYLK (ENSCJPG00005021064) HACD2 (ENSCJPG00005021067) ##22 ADCY5 (ENSCJPG00005021068) SEC22A (ENSCJPG00005021071) PDIA5 (ENSCJPG00005021072) SEMA5B (ENSCJPG00005021075) SLC49A4 (ENSCJPG00005021076) HSPBAP1 (ENSCJPG00005021077) SLC15A2 (ENSCJPG00005021078) EAF2 (ENSCJPG00005021149) IQCB1 (ENSCJPG00005021151) ENSCJPG00005000921 TSN (ENSCJPG00005000928) NIFK (ENSCJPG00005000944) CLASP1 (ENSCJPG00005002113) TFCP2L1 (ENSCJPG00005012935) ENSCJPG00005012936 Neognathae_b ANCESTRAL SPECIES 7 ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213.c Passeriformes ANCESTRAL SPECIES 6 ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00960000189521 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213.c Great tit MODERN SPECIES 27 ENSPMJG00000019903 OSBPL11 (ENSPMJG00000019902) ENSPMJG00000019901 SNX4 (ENSPMJG00000019900) ZNF148 (ENSPMJG00000019898) SLC12A8 (ENSPMJG00000019897) HEG1 (ENSPMJG00000019896) ENSPMJG00000019895 ITGB5 (ENSPMJG00000019894) ENSPMJG00000019893 UMPS (ENSPMJG00000019892) ENSPMJG00000019891 KALRN (ENSPMJG00000019890) CCDC14 (ENSPMJG00000019888) MYLK (ENSPMJG00000019887) HACD2 (ENSPMJG00000019886) ##22 ADCY5 (ENSPMJG00000019884) SEC22A (ENSPMJG00000019883) PDIA5 (ENSPMJG00000019881) SEMA5B (ENSPMJG00000019880) SLC49A4 (ENSPMJG00000019879) HSPBAP1 (ENSPMJG00000019878) SLC15A2 (ENSPMJG00000019877) EAF2 (ENSPMJG00000019876) IQCB1 (ENSPMJG00000019875) ENSPMJG00000019874 TSN (ENSPMJG00000019873) NIFK (ENSPMJG00000019872) CLASP1 (ENSPMJG00000019788) TFCP2L1 (ENSPMJG00000019785) ENSPMJG00000019784 Passeriformes_d ANCESTRAL SPECIES 8 ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00960000189521 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213.c Passeriformes_g ANCESTRAL SPECIES 9 ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00960000189521 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213.c Passeroidea ANCESTRAL SPECIES 8 ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00960000189521 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159862 Zebra finch MODERN SPECIES 29 ENSTGUG00000003948 ENSTGUG00000026642 OSBPL11 (ENSTGUG00000003959) ENSTGUG00000003987 SNX4 (ENSTGUG00000004000) ZNF148 (ENSTGUG00000004010) SLC12A8 (ENSTGUG00000004025) ENSTGUG00000022106 ENSTGUG00000018824 ITGB5 (ENSTGUG00000004062) ENSTGUG00000024643 UMPS (ENSTGUG00000004119) KALRN (ENSTGUG00000004175) CCDC14 (ENSTGUG00000004227) MYLK (ENSTGUG00000004238) HACD2 (ENSTGUG00000025666) ##22 ADCY5 (ENSTGUG00000004293) SEC22A (ENSTGUG00000004336) PDIA5 (ENSTGUG00000004344) SEMA5B (ENSTGUG00000004366) SLC49A4 (ENSTGUG00000004391) HSPBAP1 (ENSTGUG00000004406) SLC15A2 (ENSTGUG00000026244) EAF2 (ENSTGUG00000020224) IQCB1 (ENSTGUG00000004420) ENSTGUG00000004441 TSN (ENSTGUG00000020974) NIFK (ENSTGUG00000004461) CLASP1 (ENSTGUG00000004469) TFCP2L1 (ENSTGUG00000004573) ENSTGUG00000004599 Common canary MODERN SPECIES 8 LMLN (ENSSCAG00000011098) ENSSCAG00000011148 OSBPL11 (ENSSCAG00000011151) ENSSCAG00000011156 SNX4 (ENSSCAG00000011161) ZNF148 (ENSSCAG00000011166) SLC12A8 (ENSSCAG00000011168) ENSSCAG00000011170 HEG1 (ENSSCAG00000011175) ITGB5 (ENSSCAG00000011209) UMPS (ENSSCAG00000011427) ENSSCAG00000011434 ENSSCAG00000011481 CCDC14 (ENSSCAG00000011680) MYLK (ENSSCAG00000011699) HACD2 (ENSSCAG00000011720) ##22 ADCY5 (ENSSCAG00000011730) SEC22A (ENSSCAG00000011735) PDIA5 (ENSSCAG00000011764) SEMA5B (ENSSCAG00000011850) SLC49A4 (ENSSCAG00000011876) ENSSCAG00000011921 HSPBAP1 (ENSSCAG00000011928) SLC15A2 (ENSSCAG00000011937) EAF2 (ENSSCAG00000011950) IQCB1 (ENSSCAG00000011957) ENSSCAG00000011967 TSN (ENSSCAG00000011970) NIFK (ENSSCAG00000011973) CLASP1 (ENSSCAG00000011981) TFCP2L1 (ENSSCAG00000012018) Medium ground finch MODERN SPECIES 1 ENSGFOG00000006312 LMLN (ENSGFOG00000006356) ENSGFOG00000006452 OSBPL11 (ENSGFOG00000006469) ENSGFOG00000006490 SNX4 (ENSGFOG00000006506) ZNF148 (ENSGFOG00000006519) SLC12A8 (ENSGFOG00000006535) ENSGFOG00000006542 ENSGFOG00000006556 ITGB5 (ENSGFOG00000006571) UMPS (ENSGFOG00000006790) KALRN (ENSGFOG00000006979) CCDC14 (ENSGFOG00000011103) MYLK (ENSGFOG00000011113) HACD2 (ENSGFOG00000011128) ##22 ADCY5 (ENSGFOG00000011162) SEC22A (ENSGFOG00000011779) PDIA5 (ENSGFOG00000011791) SEMA5B (ENSGFOG00000011815) SLC49A4 (ENSGFOG00000011879) HSPBAP1 (ENSGFOG00000011906) SLC15A2 (ENSGFOG00000011909) EAF2 (ENSGFOG00000011921) IQCB1 (ENSGFOG00000011930) ENSGFOG00000011935 TSN (ENSGFOG00000011938) NIFK (ENSGFOG00000011941) CLASP1 (ENSGFOG00000011986) TFCP2L1 (ENSGFOG00000012568) GLI2 (ENSGFOG00000012599) Flycatcher MODERN SPECIES 26 ENSFALG00000013537 ENSFALG00000013531 OSBPL11 (ENSFALG00000013529) ENSFALG00000013526 SNX4 (ENSFALG00000013525) ZNF148 (ENSFALG00000013520) SLC12A8 (ENSFALG00000013516) HEG1 (ENSFALG00000013509) ENSFALG00000023665 ITGB5 (ENSFALG00000013470) ENSFALG00000025864 UMPS (ENSFALG00000013447) KALRN (ENSFALG00000013409) CCDC14 (ENSFALG00000024474) MYLK (ENSFALG00000013373) HACD2 (ENSFALG00000027287) ##22 ADCY5 (ENSFALG00000013350) SEC22A (ENSFALG00000013337) PDIA5 (ENSFALG00000013311) SEMA5B (ENSFALG00000013300) SLC49A4 (ENSFALG00000013288) HSPBAP1 (ENSFALG00000024337) SLC15A2 (ENSFALG00000013274) ENSFALG00000013268 IQCB1 (ENSFALG00000013262) ENSFALG00000023350 TSN (ENSFALG00000026940) NIFK (ENSFALG00000013238) CLASP1 (ENSFALG00000013233) TFCP2L1 (ENSFALG00000013230) ENSFALG00000013217 Neognathae_c ANCESTRAL SPECIES 9 ENSGT00940000154311.a.b.l.b ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213.d Golden eagle MODERN SPECIES 22 ENSACCG00020000317 ENSACCG00020004445 LMLN (ENSACCG00020004409) ENSACCG00020004363 OSBPL11 (ENSACCG00020004353) ENSACCG00020004346 SNX4 (ENSACCG00020004330) ZNF148 (ENSACCG00020004310) SLC12A8 (ENSACCG00020004294) HEG1 (ENSACCG00020004278) ITGB5 (ENSACCG00020004219) UMPS (ENSACCG00020004153) KALRN (ENSACCG00020004082) CCDC14 (ENSACCG00020004018) MYLK (ENSACCG00020003927) HACD2 (ENSACCG00020003773) ##22 ADCY5 (ENSACCG00020003743) SEC22A (ENSACCG00020003729) PDIA5 (ENSACCG00020003711) SEMA5B (ENSACCG00020003647) SLC49A4 (ENSACCG00020003542) HSPBAP1 (ENSACCG00020003529) SLC15A2 (ENSACCG00020003490) EAF2 (ENSACCG00020003461) IQCB1 (ENSACCG00020003440) ENSACCG00020003425 TSN (ENSACCG00020003407) NIFK (ENSACCG00020003397) CLASP1 (ENSACCG00020003255) TFCP2L1 (ENSACCG00020003144) GLI2 (ENSACCG00020003057) Kakapo MODERN SPECIES 22 LMLN (ENSSHBG00005002423) ENSSHBG00005002609 OSBPL11 (ENSSHBG00005002633) ENSSHBG00005002658 SNX4 (ENSSHBG00005002698) ZNF148 (ENSSHBG00005002742) SLC12A8 (ENSSHBG00005002796) ITGB5 (ENSSHBG00005002931) UMPS (ENSSHBG00005003135) KALRN (ENSSHBG00005004163) CCDC14 (ENSSHBG00005013434) ENSSHBG00005013456 ENSSHBG00005013474 ENSSHBG00005013507 ENSSHBG00005013525 HACD2 (ENSSHBG00005013550) ##22 ADCY5 (ENSSHBG00005013573) SEC22A (ENSSHBG00005013591) PDIA5 (ENSSHBG00005013628) SEMA5B (ENSSHBG00005013784) SLC49A4 (ENSSHBG00005014404) HSPBAP1 (ENSSHBG00005014410) SLC15A2 (ENSSHBG00005014420) EAF2 (ENSSHBG00005014431) IQCB1 (ENSSHBG00005014437) ENSSHBG00005014452 TSN (ENSSHBG00005014465) NIFK (ENSSHBG00005014475) CLASP1 (ENSSHBG00005014747) TFCP2L1 (ENSSHBG00005016752) ENSSHBG00005016760 African ostrich MODERN SPECIES 998 KALRN (ENSSCUG00000013157) ENSSCUG00000013358 CCDC14 (ENSSCUG00000013362) MYLK (ENSSCUG00000013380) HACD2 (ENSSCUG00000013406) ##22 ADCY5 (ENSSCUG00000013408) SEC22A (ENSSCUG00000013410) PDIA5 (ENSSCUG00000013413) Australian saltwater crocodile MODERN SPECIES 66 ENSCPRG00005002941 ENSCPRG00005002938 SNX4 (ENSCPRG00005002927) ZNF148 (ENSCPRG00005002924) SLC12A8 (ENSCPRG00005002918) HEG1 (ENSCPRG00005002906) ITGB5 (ENSCPRG00005002711) UMPS (ENSCPRG00005002514) ENSCPRG00005002202 ENSCPRG00005001825 ENSCPRG00005001749 CCDC14 (ENSCPRG00005001742) ENSCPRG00005001737 ENSCPRG00005001736 MYLK (ENSCPRG00005001711) HACD2 (ENSCPRG00005001691) ##22 ADCY5 (ENSCPRG00005001637) SEC22A (ENSCPRG00005001595) PDIA5 (ENSCPRG00005001581) SEMA5B (ENSCPRG00005001540) SLC49A4 (ENSCPRG00005001457) HSPBAP1 (ENSCPRG00005001424) SLC15A2 (ENSCPRG00005001404) EAF2 (ENSCPRG00005001380) IQCB1 (ENSCPRG00005001378) ENSCPRG00005001375 TSN (ENSCPRG00005001374) NIFK (ENSCPRG00005001371) CLASP1 (ENSCPRG00005001289) TFCP2L1 (ENSCPRG00005001253) ENSCPRG00005001220 Cryptodira ANCESTRAL SPECIES 5 ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213 Testudinoidea ANCESTRAL SPECIES 11 ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.c ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000153568.B.b ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213 ENSGT00940000159862 Emydidae ANCESTRAL SPECIES 4 ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.c ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000164632.a ENSGT00940000153568.B.a ENSGT00940000153568.B.b.b ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 Three-toed box turtle MODERN SPECIES 25 LMLN (ENSTMTG00000012941) ENSTMTG00000012885 OSBPL11 (ENSTMTG00000012829) ENSTMTG00000012801 SNX4 (ENSTMTG00000012771) ZNF148 (ENSTMTG00000012724) SLC12A8 (ENSTMTG00000012678) ENSTMTG00000012647 ENSTMTG00000012618 ITGB5 (ENSTMTG00000012583) UMPS (ENSTMTG00000012571) KALRN (ENSTMTG00000012301) ENSTMTG00000012262 CCDC14 (ENSTMTG00000012230) MYLK (ENSTMTG00000012095) HACD2 (ENSTMTG00000012055) ##22 ADCY5 (ENSTMTG00000010332) SEC22A (ENSTMTG00000010200) PDIA5 (ENSTMTG00000010164) SEMA5B (ENSTMTG00000009643) SLC49A4 (ENSTMTG00000009574) HSPBAP1 (ENSTMTG00000009551) SLC15A2 (ENSTMTG00000009528) EAF2 (ENSTMTG00000009515) IQCB1 (ENSTMTG00000009487) ENSTMTG00000009461 NIFK (ENSTMTG00000009447) CLASP1 (ENSTMTG00000001769) TFCP2L1 (ENSTMTG00000000868) GLI2 (ENSTMTG00000000839) INHBB (ENSTMTG00000000820) painted turtle MODERN SPECIES 697 ENSCPBG00000013900 OSBPL11 (ENSCPBG00000013894) ENSCPBG00000013891 SNX4 (ENSCPBG00000013889) ZNF148 (ENSCPBG00000013887) SLC12A8 (ENSCPBG00000013886) ENSCPBG00000013864 ITGB5 (ENSCPBG00000013849) UMPS (ENSCPBG00000013848) ENSCPBG00000013847 KALRN (ENSCPBG00000013817) ENSCPBG00000013807 ENSCPBG00000013803 CCDC14 (ENSCPBG00000013800) MYLK (ENSCPBG00000013789) HACD2 (ENSCPBG00000013787) ##22 ADCY5 (ENSCPBG00000013781) SEC22A (ENSCPBG00000013778) PDIA5 (ENSCPBG00000013776) SEMA5B (ENSCPBG00000013766) SLC49A4 (ENSCPBG00000013757) HSPBAP1 (ENSCPBG00000013754) SLC15A2 (ENSCPBG00000013753) EAF2 (ENSCPBG00000013751) IQCB1 (ENSCPBG00000013750) ENSCPBG00000013745 ENSCPBG00000013741 NIFK (ENSCPBG00000013739) CLASP1 (ENSCPBG00000013734) TFCP2L1 (ENSCPBG00000013730) GLI2 (ENSCPBG00000013726) Testudinidae ANCESTRAL SPECIES 8 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00940000164835 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712.c ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 ENSGT00940000153568.B.b ENSGT00390000011515 ENSGT00940000154817.b.b.b ENSGT00940000159158 ENSGT00940000159213 ENSGT00960000189138 Goode s thornscrub tortoise MODERN SPECIES 2 ENSGEVG00005004764 OSBPL11 (ENSGEVG00005004814) ENSGEVG00005004849 SNX4 (ENSGEVG00005004894) ZNF148 (ENSGEVG00005004946) SLC12A8 (ENSGEVG00005005010) ENSGEVG00005005057 ITGB5 (ENSGEVG00005005103) UMPS (ENSGEVG00005005203) ENSGEVG00005005224 ENSGEVG00005005329 ENSGEVG00005005531 ENSGEVG00005005629 CCDC14 (ENSGEVG00005005677) MYLK (ENSGEVG00005005836) HACD2 (ENSGEVG00005005945) ##22 ADCY5 (ENSGEVG00005005999) SEC22A (ENSGEVG00005006147) PDIA5 (ENSGEVG00005006166) SEMA5B (ENSGEVG00005006230) SLC49A4 (ENSGEVG00005006517) HSPBAP1 (ENSGEVG00005006542) SLC15A2 (ENSGEVG00005006586) EAF2 (ENSGEVG00005006655) IQCB1 (ENSGEVG00005006675) ENSGEVG00005006699 NIFK (ENSGEVG00005006707) CLASP1 (ENSGEVG00005007832) TFCP2L1 (ENSGEVG00005014777) GLI2 (ENSGEVG00005014900) ENSGEVG00005015153 Abingdon island giant tortoise MODERN SPECIES 1981 STARD4 (ENSCABG00000008532) ENSCABG00000008535 ENSCABG00000008538 CCDC14 (ENSCABG00000008543) MYLK (ENSCABG00000008553) HACD2 (ENSCABG00000008561) ##22 ADCY5 (ENSCABG00000008564) SEC22A (ENSCABG00000008571) PDIA5 (ENSCABG00000008575) Chinese turtle MODERN SPECIES 2215 ENSPSIG00000003559 ENSPSIG00000003562 OSBPL11 (ENSPSIG00000003568) ENSPSIG00000003577 SNX4 (ENSPSIG00000003588) ZNF148 (ENSPSIG00000003614) SLC12A8 (ENSPSIG00000003618) ENSPSIG00000003649 ENSPSIG00000003654 ITGB5 (ENSPSIG00000003659) UMPS (ENSPSIG00000003729) KALRN (ENSPSIG00000003732) ENSPSIG00000003918 CCDC14 (ENSPSIG00000004045) MYLK (ENSPSIG00000004151) HACD2 (ENSPSIG00000005158) ##22 ADCY5 (ENSPSIG00000005196) SEC22A (ENSPSIG00000006939) PDIA5 (ENSPSIG00000004534) SEMA5B (ENSPSIG00000004576) SLC49A4 (ENSPSIG00000004846) HSPBAP1 (ENSPSIG00000004951) ENSPSIG00000005161 SLC15A2 (ENSPSIG00000005215) ENSPSIG00000005512 IQCB1 (ENSPSIG00000005680) ENSPSIG00000005987 TSN (ENSPSIG00000006064) NIFK (ENSPSIG00000006103) CLASP1 (ENSPSIG00000006115) TFCP2L1 (ENSPSIG00000008408) Mammalia ANCESTRAL SPECIES 6 ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000156507 ENSGT00390000017724.a.b ENSGT00390000002188 Platypus MODERN SPECIES LMLN (ENSOANG00000047099) ENSOANG00000046781 OSBPL11 (ENSOANG00000038270) SNX4 (ENSOANG00000040479) ZNF148 (ENSOANG00000049691) ENSOANG00000043131 ENSOANG00000036711 ENSOANG00000043397 ITGB5 (ENSOANG00000039242) UMPS (ENSOANG00000045479) KALRN (ENSOANG00000038382) ENSOANG00000036118 ENSOANG00000036668 ENSOANG00000036637 ENSOANG00000013686 HACD2 (ENSOANG00000043937) ##22 ADCY5 (ENSOANG00000035984) SEC22A (ENSOANG00000000381) PDIA5 (ENSOANG00000041436) SEMA5B (ENSOANG00000041146) SLC49A4 (ENSOANG00000048508) ENSOANG00000049998 ENSOANG00000043602 ENSOANG00000046720 ENSOANG00000042753 ENSOANG00000046372 ENSOANG00000050320 ARSA (ENSOANG00000020836) ENSOANG00000048792 ENSOANG00000038477 ENSOANG00000012043 Theria ANCESTRAL SPECIES 40 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT00900000143497 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 ENSGT00940000161500 Marsupialia ANCESTRAL SPECIES 5 ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT00900000143497 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248.bb ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b.h ENSGT00940000158837 ENSGT00940000154311.a.a.a.b ENSGT00940000154578.A.d ENSGT00940000154311.a.b.i ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Marsupialia_b ANCESTRAL SPECIES 3 ENSGT00390000016972.b ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248.bb ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b.h ENSGT00940000158837 ENSGT00940000154311.a.a.a.b ENSGT00940000154578.A.d.l.a ENSGT00940000154311.a.b.i ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Diprotodontia ANCESTRAL SPECIES 23 ENSGT00390000016972.b.g ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248.bb ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b.h ENSGT00940000158837 ENSGT00940000154578.A.d.l.a ENSGT00940000154311.a.b.i ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Diprotodontia_a ANCESTRAL SPECIES 24 ENSGT00390000008796 ENSGT00390000003114.e.b.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT00940000159077 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248.bb ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b.h ENSGT00940000158837 ENSGT00940000154578.A.d.l.a ENSGT00940000154311.a.b.i ENSGT01050000244950.a.a.a ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Common wonbat MODERN SPECIES 1139 ENSVURG00010007167 LMLN (ENSVURG00010007075) ENSVURG00010007037 OSBPL11 (ENSVURG00010007016) ENSVURG00010007009 ZNF148 (ENSVURG00010006931) SLC12A8 (ENSVURG00010006914) ENSVURG00010006890 CLDN8 (ENSVURG00010006879) ITGB5 (ENSVURG00010006865) UMPS (ENSVURG00010006856) KALRN (ENSVURG00010006792) ENSVURG00010006766 ENSVURG00010006752 MYLK (ENSVURG00010006724) HACD2 (ENSVURG00010006711) ##22 ADCY5 (ENSVURG00010006415) SEC22A (ENSVURG00010006368) PDIA5 (ENSVURG00010006345) ENSVURG00010006326 SEMA5B (ENSVURG00010006080) SLC49A4 (ENSVURG00010005977) HSPBAP1 (ENSVURG00010005953) ENSVURG00010005867 ENSVURG00010005855 ENSVURG00010005836 ENSVURG00010005770 KPNA1 (ENSVURG00010005741) FAM162A (ENSVURG00010005728) MIX23 (ENSVURG00010005713) ENSVURG00010005708 koala MODERN SPECIES 23 OSBPL11 (ENSPCIG00000018734) SNX4 (ENSPCIG00000018735) ENSPCIG00000031985 ZNF148 (ENSPCIG00000018738) SLC12A8 (ENSPCIG00000018762) ENSPCIG00000012340 ENSPCIG00000002475 CLDN8 (ENSPCIG00000002482) ITGB5 (ENSPCIG00000002499) UMPS (ENSPCIG00000002525) ENSPCIG00000002539 ENSPCIG00000031061 ENSPCIG00000006560 ENSPCIG00000006554 MYLK (ENSPCIG00000006541) HACD2 (ENSPCIG00000006538) ##22 ADCY5 (ENSPCIG00000012821) SEC22A (ENSPCIG00000006533) PDIA5 (ENSPCIG00000006526) SEMA5B (ENSPCIG00000015616) SLC49A4 (ENSPCIG00000015612) HSPBAP1 (ENSPCIG00000015608) ENSPCIG00000013374 ENSPCIG00000001679 ENSPCIG00000001736 KPNA1 (ENSPCIG00000025751) FAM162A (ENSPCIG00000025717) MIX23 (ENSPCIG00000025713) ENSPCIG00000025712 CASR (ENSPCIG00000025703) ENSPCIG00000025695 Wallaby MODERN SPECIES 10215 ENSMEUG00000002732 ##22 Opossum MODERN SPECIES 3 SNX4 (ENSMODG00000018377) ZNF148 (ENSMODG00000018374) SLC12A8 (ENSMODG00000018371) ENSMODG00000018368 ENSMODG00000046480 ENSMODG00000038927 ENSMODG00000018367 ENSMODG00000037607 ITGB5 (ENSMODG00000018360) UMPS (ENSMODG00000018353) ENSMODG00000046051 ENSMODG00000018350 ENSMODG00000018347 ENSMODG00000018346 MYLK (ENSMODG00000018341) HACD2 (ENSMODG00000018338) ##22 ADCY5 (ENSMODG00000018333) SEC22A (ENSMODG00000018331) PDIA5 (ENSMODG00000018328) SEMA5B (ENSMODG00000018325) SLC49A4 (ENSMODG00000018322) HSPBAP1 (ENSMODG00000018320) ENSMODG00000018318 ENSMODG00000018313 ENSMODG00000048959 ENSMODG00000018311 ENSMODG00000018308 KPNA1 (ENSMODG00000018306) FAM162A (ENSMODG00000018300) MIX23 (ENSMODG00000018298) ENSMODG00000042527 Eutheria ANCESTRAL SPECIES 5 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT00900000143497 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00910000147747 ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00910000147747 ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Glires ANCESTRAL SPECIES 2 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00910000147747 ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Rodentia ANCESTRAL SPECIES 2 ENSGT00390000016972.b.j.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Rodentia_B ANCESTRAL SPECIES 2 ENSGT00390000016972.b.j.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Kangaroo rat MODERN SPECIES 364 Lrch3 (ENSDORG00000003570) ENSDORG00000001582 Lmln (ENSDORG00000001583) ENSDORG00000024238 Osbpl11 (ENSDORG00000007929) Snx4 (ENSDORG00000025757) Zfp148 (ENSDORG00000024792) Slc12a8 (ENSDORG00000019742) ENSDORG00000026627 Itgb5 (ENSDORG00000004043) Umps (ENSDORG00000004041) Kalrn (ENSDORG00000015381) Ropn1 (ENSDORG00000009614) ENSDORG00000024374 Mylk (ENSDORG00000003044) Hacd2 (ENSDORG00000024354) ##22 Adcy5 (ENSDORG00000000320) Sec22a (ENSDORG00000000314) Pdia5 (ENSDORG00000005941) Sema5b (ENSDORG00000013759) Slc49a4 (ENSDORG00000013757) Hspbap1 (ENSDORG00000001682) Parp14 (ENSDORG00000000690) Dtx3l (ENSDORG00000003173) Parp9 (ENSDORG00000003171) Kpna1 (ENSDORG00000003170) Wdr5b (ENSDORG00000003169) Fam162a (ENSDORG00000003168) Ccdc58 (ENSDORG00000003167) ENSDORG00000003164 Casr (ENSDORG00000003162) Myomorpha ANCESTRAL SPECIES 14 ENSGT00390000016972.b.j.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Muroidea ANCESTRAL SPECIES 11 ENSGT00390000016972.b.j.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Muroidea_A ANCESTRAL SPECIES 17 ENSGT00390000016972.b.j.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Cricetidae ANCESTRAL SPECIES 16 ENSGT00390000016972.b.j.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Cricetidae_B ANCESTRAL SPECIES 13 ENSGT00390000016972.b.j.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Prairie vole MODERN SPECIES 7 Iqcg (ENSMOCG00000003184) ENSMOCG00000022359 Lmln (ENSMOCG00000009918) ENSMOCG00000001703 Osbpl11 (ENSMOCG00000002032) Snx4 (ENSMOCG00000011568) Zfp148 (ENSMOCG00000003866) Slc12a8 (ENSMOCG00000000790) ENSMOCG00000003042 Itgb5 (ENSMOCG00000021055) Umps (ENSMOCG00000017158) Kalrn (ENSMOCG00000002780) Ropn1 (ENSMOCG00000009990) Ccdc14 (ENSMOCG00000020626) Mylk (ENSMOCG00000020331) Hacd2 (ENSMOCG00000008110) ##22 Adcy5 (ENSMOCG00000018853) Sec22a (ENSMOCG00000010833) ENSMOCG00000017023 ENSMOCG00000004499 Pdia5 (ENSMOCG00000015699) Sema5b (ENSMOCG00000001666) Slc49a4 (ENSMOCG00000012213) Hspbap1 (ENSMOCG00000020288) ENSMOCG00000007676 Parp14 (ENSMOCG00000021121) ENSMOCG00000013470 ENSMOCG00000008192 ENSMOCG00000009728 Or5h19 (ENSMOCG00000020001) Or5h17 (ENSMOCG00000016914) Northern American deer mouse MODERN SPECIES 3 Zfp148 (ENSPEMG00000012613) Slc12a8 (ENSPEMG00000018474) ENSPEMG00000027165 ENSPEMG00000015000 Itgb5 (ENSPEMG00000016525) ENSPEMG00000026898 Umps (ENSPEMG00000016924) Kalrn (ENSPEMG00000009901) Ropn1 (ENSPEMG00000014011) Ccdc14 (ENSPEMG00000014494) ENSPEMG00000028807 ENSPEMG00000025031 ENSPEMG00000026076 ENSPEMG00000026136 ENSPEMG00000028699 Hacd2 (ENSPEMG00000015716) ##22 Adcy5 (ENSPEMG00000017362) Sec22a (ENSPEMG00000018659) Pdia5 (ENSPEMG00000018914) Sema5b (ENSPEMG00000000177) Slc49a4 (ENSPEMG00000003537) Hspbap1 (ENSPEMG00000006994) Parp14 (ENSPEMG00000008286) Dtx3l (ENSPEMG00000009226) Parp9 (ENSPEMG00000010239) Kpna1 (ENSPEMG00000018248) Wdr5b (ENSPEMG00000004447) ENSPEMG00000005712 Ccdc58 (ENSPEMG00000017093) ENSPEMG00000003391 Casr (ENSPEMG00000008816) Cricetinae ANCESTRAL SPECIES 10 ENSGT00730000111263 ENSGT00390000016972.b.j.a.b.a.b ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Chinese hamster chok1gshd MODERN SPECIES 382 ENSCGRG00001002381 Lmln (ENSCGRG00001009959) ENSCGRG00001004790 Osbpl11 (ENSCGRG00001021176) Snx4 (ENSCGRG00001024307) Zfp148 (ENSCGRG00001023998) Slc12a8 (ENSCGRG00001021103) Heg1 (ENSCGRG00001008383) ENSCGRG00001011871 Itgb5 (ENSCGRG00001021826) Umps (ENSCGRG00001013380) Kalrn (ENSCGRG00001020532) Ropn1 (ENSCGRG00001025058) Ccdc14 (ENSCGRG00001005775) Mylk (ENSCGRG00001021977) Hacd2 (ENSCGRG00001000471) ##22 Adcy5 (ENSCGRG00001014452) Sec22a (ENSCGRG00001022111) Pdia5 (ENSCGRG00001005309) Sema5b (ENSCGRG00001008291) ENSCGRG00001023196 Slc49a4 (ENSCGRG00001001151) Hspbap1 (ENSCGRG00001009454) Parp14 (ENSCGRG00001006699) ENSCGRG00001019002 Parp9 (ENSCGRG00001020003) Kpna1 (ENSCGRG00001022843) ENSCGRG00001004715 ENSCGRG00001002066 Ccdc58 (ENSCGRG00001007596) ENSCGRG00001013254 Golden Hamster MODERN SPECIES 645 ENSMAUG00000011763 Lmln (ENSMAUG00000021495) Osbpl11 (ENSMAUG00000018783) Snx4 (ENSMAUG00000016339) Zfp148 (ENSMAUG00000013472) Slc12a8 (ENSMAUG00000001683) ENSMAUG00000015456 Itgb5 (ENSMAUG00000012958) Umps (ENSMAUG00000010311) ENSMAUG00000017635 Kalrn (ENSMAUG00000021344) Ropn1 (ENSMAUG00000022001) ENSMAUG00000005354 Ccdc14 (ENSMAUG00000021639) Mylk (ENSMAUG00000003866) Hacd2 (ENSMAUG00000021834) ##22 Adcy5 (ENSMAUG00000011489) Sec22a (ENSMAUG00000021594) Pdia5 (ENSMAUG00000010531) Sema5b (ENSMAUG00000019953) Slc49a4 (ENSMAUG00000000708) ENSMAUG00000021258 Dtx3l (ENSMAUG00000017541) Parp9 (ENSMAUG00000002664) ENSMAUG00000020889 Wdr5b (ENSMAUG00000007468) Fam162a (ENSMAUG00000022254) Ccdc58 (ENSMAUG00000020065) ENSMAUG00000011953 Casr (ENSMAUG00000007398) Cd86 (ENSMAUG00000019431) Murinae ANCESTRAL SPECIES 13 ENSGT00390000016972.b.j.a.a.c ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT00900000143497 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717.i.a ENSGT00940000155717.i.b.a.a.b.b Mus ANCESTRAL SPECIES 13 ENSGT00730000111263 ENSGT00390000016972.b.j.a.a.c ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717.i.a ENSGT00940000155717.i.b.a.a.b.b Mus_A ANCESTRAL SPECIES 18 ENSGT00730000111263 ENSGT00390000016972.b.j.a.a.c ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717.i.a ENSGT00940000155717.i.b.a.a.b.b Ryukyu mouse MODERN SPECIES 7 MGP_CAROLIEiJ_G0020684 Rpl35a (MGP_CAROLIEiJ_G0020685) Lmln (MGP_CAROLIEiJ_G0020686) Osbpl11 (MGP_CAROLIEiJ_G0020687) Snx4 (MGP_CAROLIEiJ_G0020688) Zfp148 (MGP_CAROLIEiJ_G0020689) Slc12a8 (MGP_CAROLIEiJ_G0020690) Heg1 (MGP_CAROLIEiJ_G0020691) MGP_CAROLIEiJ_G0020692 Itgb5 (MGP_CAROLIEiJ_G0020693) Umps (MGP_CAROLIEiJ_G0020694) MGP_CAROLIEiJ_G0020695 Ropn1 (MGP_CAROLIEiJ_G0020696) Ccdc14 (MGP_CAROLIEiJ_G0020697) Mylk (MGP_CAROLIEiJ_G0020698) Hacd2 (MGP_CAROLIEiJ_G0020699) ##22 Adcy5 (MGP_CAROLIEiJ_G0020700) Sec22a (MGP_CAROLIEiJ_G0020701) Pdia5 (MGP_CAROLIEiJ_G0020702) Sema5b (MGP_CAROLIEiJ_G0020703) Slc49a4 (MGP_CAROLIEiJ_G0020704) Hspbap1 (MGP_CAROLIEiJ_G0020705) Parp14 (MGP_CAROLIEiJ_G0020706) Dtx3l (MGP_CAROLIEiJ_G0020707) Parp9 (MGP_CAROLIEiJ_G0020708) Kpna1 (MGP_CAROLIEiJ_G0020709) Wdr5b (MGP_CAROLIEiJ_G0020710) Fam162a (MGP_CAROLIEiJ_G0020711) Ccdc58 (MGP_CAROLIEiJ_G0020712) MGP_CAROLIEiJ_G0020713 MGP_CAROLIEiJ_G0020714 Mus_B ANCESTRAL SPECIES 18 ENSGT00730000111263 ENSGT00390000016972.b.j.a.a.c ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248.v ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717.i.a ENSGT00940000155717.i.b.a.a.b.a Mouse MODERN SPECIES 7 Iqcg (ENSMUSG00000035578) Rpl35a (ENSMUSG00000060636) Lmln (ENSMUSG00000022802) Osbpl11 (ENSMUSG00000022807) Snx4 (ENSMUSG00000022808) Zfp148 (ENSMUSG00000022811) Slc12a8 (ENSMUSG00000035506) Heg1 (ENSMUSG00000075254) Muc13 (ENSMUSG00000022824) Itgb5 (ENSMUSG00000022817) Umps (ENSMUSG00000022814) Kalrn (ENSMUSG00000061751) Ropn1 (ENSMUSG00000022832) Ccdc14 (ENSMUSG00000022833) Mylk (ENSMUSG00000022836) Hacd2 (ENSMUSG00000035376) ##22 Adcy5 (ENSMUSG00000022840) Sec22a (ENSMUSG00000034473) Pdia5 (ENSMUSG00000022844) Sema5b (ENSMUSG00000052133) Slc49a4 (ENSMUSG00000022848) Hspbap1 (ENSMUSG00000022849) Parp14 (ENSMUSG00000034422) Dtx3l (ENSMUSG00000049502) Parp9 (ENSMUSG00000022906) Kpna1 (ENSMUSG00000022905) Wdr5b (ENSMUSG00000034379) Fam162a (ENSMUSG00000003955) Ccdc58 (ENSMUSG00000075229) Csta1 (ENSMUSG00000034362) Stfa2l1 (ENSMUSG00000059657) Mus_C ANCESTRAL SPECIES 12 ENSGT00390000016972.b.j.a.b.a.b.c.a.b.b ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248.v ENSGT00940000155248.u ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717.i.a ENSGT00940000155717.i.b.a.a.b.a spretus MODERN SPECIES 7 Lmln (MGP_SPRETEiJ_G0021582) Osbpl11 (MGP_SPRETEiJ_G0021583) Snx4 (MGP_SPRETEiJ_G0021584) Zfp148 (MGP_SPRETEiJ_G0021585) Slc12a8 (MGP_SPRETEiJ_G0021586) Heg1 (MGP_SPRETEiJ_G0021587) MGP_SPRETEiJ_G0021588 Itgb5 (MGP_SPRETEiJ_G0021589) Umps (MGP_SPRETEiJ_G0021590) MGP_SPRETEiJ_G0021591 MGP_SPRETEiJ_G0021592 MGP_SPRETEiJ_G0021593 Ropn1 (MGP_SPRETEiJ_G0021594) Ccdc14 (MGP_SPRETEiJ_G0021595) Mylk (MGP_SPRETEiJ_G0021596) Hacd2 (MGP_SPRETEiJ_G0021597) ##22 Adcy5 (MGP_SPRETEiJ_G0021598) Sec22a (MGP_SPRETEiJ_G0021599) Pdia5 (MGP_SPRETEiJ_G0021600) Sema5b (MGP_SPRETEiJ_G0021601) Slc49a4 (MGP_SPRETEiJ_G0021602) Hspbap1 (MGP_SPRETEiJ_G0021603) Parp14 (MGP_SPRETEiJ_G0021604) Dtx3l (MGP_SPRETEiJ_G0021605) Parp9 (MGP_SPRETEiJ_G0021606) Kpna1 (MGP_SPRETEiJ_G0021607) Wdr5b (MGP_SPRETEiJ_G0021608) Fam162a (MGP_SPRETEiJ_G0021609) Ccdc58 (MGP_SPRETEiJ_G0021610) MGP_SPRETEiJ_G0021611 MGP_SPRETEiJ_G0021612 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 29 ENSMSIG00000009762 Ropn1 (ENSMSIG00000009711) Ccdc14 (ENSMSIG00000009685) Mylk (ENSMSIG00000009596) ENSMSIG00000009555 ##22 Adcy5 (ENSMSIG00000009464) Sec22a (ENSMSIG00000009393) Pdia5 (ENSMSIG00000009345) Sema5b (ENSMSIG00000009235) Slc49a4 (ENSMSIG00000009195) ENSMSIG00000009103 Hspbap1 (ENSMSIG00000009038) Parp14 (ENSMSIG00000008946) Steppe mouse MODERN SPECIES 2654 ENSMSIG00000019043 ##22 ENSMSIG00000019061 Shrew mouse MODERN SPECIES 3 MGP_PahariEiJ_G0016387 MGP_PahariEiJ_G0016388 Lmln (MGP_PahariEiJ_G0016389) Osbpl11 (MGP_PahariEiJ_G0016390) Snx4 (MGP_PahariEiJ_G0016391) Zfp148 (MGP_PahariEiJ_G0016392) Slc12a8 (MGP_PahariEiJ_G0016393) Heg1 (MGP_PahariEiJ_G0016394) MGP_PahariEiJ_G0016395 Itgb5 (MGP_PahariEiJ_G0016396) Umps (MGP_PahariEiJ_G0016397) MGP_PahariEiJ_G0016398 Ropn1 (MGP_PahariEiJ_G0016399) Ccdc14 (MGP_PahariEiJ_G0016400) Mylk (MGP_PahariEiJ_G0016401) Hacd2 (MGP_PahariEiJ_G0016402) ##22 Adcy5 (MGP_PahariEiJ_G0016403) Sec22a (MGP_PahariEiJ_G0016404) Pdia5 (MGP_PahariEiJ_G0016405) Sema5b (MGP_PahariEiJ_G0016406) Slc49a4 (MGP_PahariEiJ_G0016407) Hspbap1 (MGP_PahariEiJ_G0016408) Parp14 (MGP_PahariEiJ_G0016409) Dtx3l (MGP_PahariEiJ_G0016410) MGP_PahariEiJ_G0016411 Kpna1 (MGP_PahariEiJ_G0016412) Wdr5b (MGP_PahariEiJ_G0016413) Fam162a (MGP_PahariEiJ_G0016414) Ccdc58 (MGP_PahariEiJ_G0016415) MGP_PahariEiJ_G0016416 Casr (MGP_PahariEiJ_G0016417) Rat MODERN SPECIES 2 Lmln (ENSRNOG00000001781) Osbpl11 (ENSRNOG00000001782) Snx4 (ENSRNOG00000001786) AC110981.1 (ENSRNOG00000026991) Zfp148 (ENSRNOG00000001789) Slc12a8 (ENSRNOG00000001792) Muc13 (ENSRNOG00000001794) Heg1 (ENSRNOG00000001793) AC133403.1 (ENSRNOG00000046836) Itgb5 (ENSRNOG00000001795) Umps (ENSRNOG00000001797) Kalrn (ENSRNOG00000001706) Ropn1 (ENSRNOG00000002187) Ccdc14 (ENSRNOG00000021469) Mylk (ENSRNOG00000002215) Hacd2 (ENSRNOG00000038761) ##22 Adcy5 (ENSRNOG00000002229) Sec22a (ENSRNOG00000043069) Pdia5 (ENSRNOG00000032327) Sema5b (ENSRNOG00000002238) Slc49a4 (ENSRNOG00000002240) Hspbap1 (ENSRNOG00000002241) Parp14 (ENSRNOG00000023334) ENSRNOG00000069467 Dtx3l (ENSRNOG00000023400) Parp9 (ENSRNOG00000023463) Kpna1 (ENSRNOG00000051711) Wdr5b (ENSRNOG00000002253) Fam162a (ENSRNOG00000002255) Mix23 (ENSRNOG00000031653) RGD1565297 (ENSRNOG00000023917) Upper Galilee mountains blind mole rat MODERN SPECIES 1215 Snx4 (ENSNGAG00000021712) Zfp148 (ENSNGAG00000018347) Slc12a8 (ENSNGAG00000018046) ENSNGAG00000023482 Itgb5 (ENSNGAG00000017879) Umps (ENSNGAG00000023347) Kalrn (ENSNGAG00000020293) Ropn1 (ENSNGAG00000023919) Ccdc14 (ENSNGAG00000024054) Mylk (ENSNGAG00000018265) Hacd2 (ENSNGAG00000019476) ##22 Adcy5 (ENSNGAG00000015726) Sec22a (ENSNGAG00000021234) Pdia5 (ENSNGAG00000024159) Sema5b (ENSNGAG00000021299) ENSNGAG00000020713 Slc49a4 (ENSNGAG00000023774) Hspbap1 (ENSNGAG00000024344) Parp14 (ENSNGAG00000024058) Dtx3l (ENSNGAG00000024127) Parp9 (ENSNGAG00000013531) Kpna1 (ENSNGAG00000019753) Wdr5b (ENSNGAG00000013754) Fam162a (ENSNGAG00000024111) Ccdc58 (ENSNGAG00000021453) ENSNGAG00000000990 Lesser Egyptian jerboa MODERN SPECIES 107 Snx21 (ENSJJAG00000017276) Dnttip1 (ENSJJAG00000016005) Wfdc3 (ENSJJAG00000007071) ENSJJAG00000014631 Wfdc13 (ENSJJAG00000020079) Wfdc11 (ENSJJAG00000021997) Wfdc9 (ENSJJAG00000023498) ENSJJAG00000016931 Eppin (ENSJJAG00000016474) ENSJJAG00000017754 Wfdc2 (ENSJJAG00000020078) Matn4 (ENSJJAG00000011320) Slpi (ENSJJAG00000010935) Kalrn (ENSJJAG00000017254) Ropn1 (ENSJJAG00000022230) Hacd2 (ENSJJAG00000023887) ##22 Adcy5 (ENSJJAG00000009714) Sec22a (ENSJJAG00000016737) Pdia5 (ENSJJAG00000020137) Sema5b (ENSJJAG00000001209) Slc49a4 (ENSJJAG00000004089) ENSJJAG00000013616 Rodentia_A ANCESTRAL SPECIES 5 ENSGT00390000016972.b.j.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Hystricomorpha ANCESTRAL SPECIES 18 ENSGT00530000063779.B ENSGT01020000230359.A ENSGT01020000230359.B ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Hystricomorpha_a ANCESTRAL SPECIES 36 ENSGT00390000005979.a ENSGT00950000183072.a ENSGT00530000063779.B ENSGT01020000230359.A ENSGT01020000230359.B ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.l.b ENSGT00940000155717 ENSGT00940000157596 Guinea pig MODERN SPECIES 87 CSRNP1 (ENSCPOG00000030887) ENSCPOG00000038030 CX3CR1 (ENSCPOG00000033203) CCR8 (ENSCPOG00000011883) SNX4 (ENSCPOG00000009282) ENSCPOG00000038702 ZNF148 (ENSCPOG00000008835) SLC12A8 (ENSCPOG00000012476) HEG1 (ENSCPOG00000037030) ITGB5 (ENSCPOG00000009608) UMPS (ENSCPOG00000007985) KALRN (ENSCPOG00000012451) ENSCPOG00000026523 CCDC14 (ENSCPOG00000014386) MYLK (ENSCPOG00000004740) HACD2 (ENSCPOG00000033371) ##22 ADCY5 (ENSCPOG00000013929) SEC22A (ENSCPOG00000009176) PDIA5 (ENSCPOG00000009168) SEMA5B (ENSCPOG00000022428) SLC49A4 (ENSCPOG00000008927) HSPBAP1 (ENSCPOG00000000075) PARP14 (ENSCPOG00000020020) DTX3L (ENSCPOG00000027004) PARP9 (ENSCPOG00000022546) KPNA1 (ENSCPOG00000007925) ENSCPOG00000005713 FAM162A (ENSCPOG00000005711) MIX23 (ENSCPOG00000005709) ENSCPOG00000008691 Hystricomorpha_b ANCESTRAL SPECIES 32 ENSGT00390000005979.a ENSGT00950000183072.a ENSGT00530000063779.B ENSGT01020000230359.A ENSGT01020000230359.B ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.l.b ENSGT00940000155717 ENSGT00940000157596 Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 188 ZNF148 (ENSODEG00000006659) SLC12A8 (ENSODEG00000008849) ENSODEG00000019397 ENSODEG00000006678 ENSODEG00000007015 ITGB5 (ENSODEG00000008371) UMPS (ENSODEG00000008657) ENSODEG00000007279 KALRN (ENSODEG00000006501) ENSODEG00000007511 CCDC14 (ENSODEG00000007691) ENSODEG00000007317 MYLK (ENSODEG00000007628) ENSODEG00000019662 ENSODEG00000007054 ENSODEG00000007320 ##22 ENSODEG00000008102 ADCY5 (ENSODEG00000006735) SEC22A (ENSODEG00000006813) PDIA5 (ENSODEG00000006957) SEMA5B (ENSODEG00000008076) SLC49A4 (ENSODEG00000011339) HSPBAP1 (ENSODEG00000007295) PARP14 (ENSODEG00000008430) DTX3L (ENSODEG00000008507) PARP9 (ENSODEG00000010249) KPNA1 (ENSODEG00000008059) ENSODEG00000019490 WDR5B (ENSODEG00000019471) FAM162A (ENSODEG00000008867) ENSODEG00000008197 Degu MODERN SPECIES 108 ENSODEG00000010363 ##22 ENSODEG00000011399 PTPN5 (ENSODEG00000011115) TMEM86A (ENSODEG00000012064) ENSODEG00000019868 ENSODEG00000010606 ENSODEG00000009912 SPTY2D1 (ENSODEG00000011157) ENSODEG00000010073 ENSODEG00000009385 TSG101 (ENSODEG00000011046) ENSODEG00000010760 ENSODEG00000010324 ENSODEG00000009666 ENSODEG00000019665 ENSODEG00000010218 Degu DUPLICATION Degu MODERN SPECIES 68 ZNF282 (ENSODEG00000012954) ZNF212 (ENSODEG00000012931) ZNF777 (ENSODEG00000012249) ZNF746 (ENSODEG00000012599) KRBA1 (ENSODEG00000011719) ZNF467 (ENSODEG00000011823) ENSODEG00000013378 ATP6V0E2 (ENSODEG00000013140) LRRC61 (ENSODEG00000020121) RARRES2 (ENSODEG00000011508) REPIN1 (ENSODEG00000011558) ENSODEG00000012564 ENSODEG00000020077 ENSODEG00000011969 GIMAP4 (ENSODEG00000011659) ENSODEG00000011911 ##22 ENSODEG00000011306 ENSODEG00000011013 TMEM176B (ENSODEG00000012160) TMEM176A (ENSODEG00000012248) AOC1 (ENSODEG00000011268) KCNH2 (ENSODEG00000011499) NOS3 (ENSODEG00000013587) ATG9B (ENSODEG00000010393) ABCB8 (ENSODEG00000010807) ASIC3 (ENSODEG00000013176) CDK5 (ENSODEG00000011735) ENSODEG00000011951 SLC4A2 (ENSODEG00000012239) FASTK (ENSODEG00000015168) TMUB1 (ENSODEG00000011461) Degu MODERN SPECIES 431 ENSODEG00000000060 ENSODEG00000000048 ##22 ENSODEG00000000044 Long-tailed chinchilla MODERN SPECIES 134 XIRP1 (ENSCLAG00000017823) ENSCLAG00000014747 CX3CR1 (ENSCLAG00000014102) CCR8 (ENSCLAG00000014415) SNX4 (ENSCLAG00000015678) ZNF148 (ENSCLAG00000011127) SLC12A8 (ENSCLAG00000011051) ENSCLAG00000009772 ENSCLAG00000010170 ITGB5 (ENSCLAG00000012736) UMPS (ENSCLAG00000014945) KALRN (ENSCLAG00000009409) ENSCLAG00000012814 CCDC14 (ENSCLAG00000014825) MYLK (ENSCLAG00000011810) HACD2 (ENSCLAG00000010576) ##22 ADCY5 (ENSCLAG00000009501) SEC22A (ENSCLAG00000013594) PDIA5 (ENSCLAG00000015554) SEMA5B (ENSCLAG00000014814) SLC49A4 (ENSCLAG00000012057) HSPBAP1 (ENSCLAG00000010939) PARP14 (ENSCLAG00000009862) DTX3L (ENSCLAG00000010981) PARP9 (ENSCLAG00000009939) KPNA1 (ENSCLAG00000010516) WDR5B (ENSCLAG00000017883) FAM162A (ENSCLAG00000013224) MIX23 (ENSCLAG00000011614) CSTA (ENSCLAG00000012262) ENSCLAG00000010972 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 11 ENSHGLG00000014404 ZNF148 (ENSHGLG00000011875) ENSHGLG00000016690 ENSHGLG00000037460 ITGB5 (ENSHGLG00000011184) ENSHGLG00000047740 UMPS (ENSHGLG00000011551) KALRN (ENSHGLG00000018826) ENSHGLG00000020711 ENSHGLG00000012259 ENSHGLG00000046407 ENSHGLG00000001029 CCDC14 (ENSHGLG00000001004) ENSHGLG00000048936 MYLK (ENSHGLG00000000906) ENSHGLG00000050538 ##22 ADCY5 (ENSHGLG00000002391) SEC22A (ENSHGLG00000002346) ENSHGLG00000002278 SEMA5B (ENSHGLG00000002109) SLC49A4 (ENSHGLG00000002042) HSPBAP1 (ENSHGLG00000001996) PARP14 (ENSHGLG00000001930) PARP9 (ENSHGLG00000001805) ENSHGLG00000001892 DTX3L (ENSHGLG00000001868) ENSHGLG00000001733 WDR5B (ENSHGLG00000047370) FAM162A (ENSHGLG00000048091) CCDC58 (ENSHGLG00000040686) ENSHGLG00000045666 Naked mole-rat female MODERN SPECIES 15 WDR24 (ENSHGLG00000008658) FBXL16 (ENSHGLG00000039193) METRN (ENSHGLG00000040872) ANTKMT (ENSHGLG00000009932) CCDC78 (ENSHGLG00000002293) CIAO3 (ENSHGLG00000002393) MSLN (ENSHGLG00000002450) MSLNL (ENSHGLG00000002526) RPUSD1 (ENSHGLG00000039871) ENSHGLG00000050099 ENSHGLG00000041743 GNG13 (ENSHGLG00000050711) ENSHGLG00000032853 LMF1 (ENSHGLG00000002689) SOX8 (ENSHGLG00000035960) ENSHGLG00000002802 ##22 SSTR5 (ENSHGLG00000002823) ENSHGLG00000002851 ENSHGLG00000039271 CACNA1H (ENSHGLG00000002918) ENSHGLG00000041261 ENSHGLG00000046140 ENSHGLG00000048225 UBE2I (ENSHGLG00000047989) BAIAP3 (ENSHGLG00000003395) TSR3 (ENSHGLG00000003477) GNPTG (ENSHGLG00000001484) UNKL (ENSHGLG00000001586) UQCC4 (ENSHGLG00000001649) PERCC1 (ENSHGLG00000042238) CCDC154 (ENSHGLG00000001687) Sciuridae ANCESTRAL SPECIES 12 ENSGT00730000111263 ENSGT00390000016972.b.j.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Marmotini ANCESTRAL SPECIES 13 ENSGT00730000111263 ENSGT00390000016972.b.j.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Alpin marmot MODERN SPECIES 19 ENSMMMG00000012255 ZNF148 (ENSMMMG00000012274) SLC12A8 (ENSMMMG00000012328) ENSMMMG00000012665 ITGB5 (ENSMMMG00000012679) ENSMMMG00000012704 UMPS (ENSMMMG00000012713) ENSMMMG00000012738 ENSMMMG00000012981 ENSMMMG00000013014 ENSMMMG00000013183 CCDC14 (ENSMMMG00000013192) ENSMMMG00000013225 ENSMMMG00000013234 ENSMMMG00000013256 HACD2 (ENSMMMG00000013260) ##22 ADCY5 (ENSMMMG00000013268) SEC22A (ENSMMMG00000013291) PDIA5 (ENSMMMG00000013311) SEMA5B (ENSMMMG00000013335) SLC49A4 (ENSMMMG00000013367) HSPBAP1 (ENSMMMG00000013384) PARP14 (ENSMMMG00000013397) DTX3L (ENSMMMG00000013433) PARP9 (ENSMMMG00000013448) KPNA1 (ENSMMMG00000013462) WDR5B (ENSMMMG00000013487) ENSMMMG00000013490 MIX23 (ENSMMMG00000013503) CSTA (ENSMMMG00000013578) CASR (ENSMMMG00000013617) Marmotini_b ANCESTRAL SPECIES 36 ENSGT00940000158330 ENSGT00730000111263 ENSGT00390000016972.b.j.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Arctic ground squirrel MODERN SPECIES 5 ZNF148 (ENSUPAG00010021634) SLC12A8 (ENSUPAG00010021430) HEG1 (ENSUPAG00010021402) ENSUPAG00010021397 ENSUPAG00010021393 ITGB5 (ENSUPAG00010021380) UMPS (ENSUPAG00010021377) ENSUPAG00010021372 KALRN (ENSUPAG00010020772) ENSUPAG00010020746 CCDC14 (ENSUPAG00010020712) ENSUPAG00010020702 ENSUPAG00010020699 ENSUPAG00010020696 ENSUPAG00010020694 HACD2 (ENSUPAG00010020688) ##22 ADCY5 (ENSUPAG00010020679) SEC22A (ENSUPAG00010020661) PDIA5 (ENSUPAG00010020647) SEMA5B (ENSUPAG00010020613) SLC49A4 (ENSUPAG00010020601) HSPBAP1 (ENSUPAG00010020596) PARP14 (ENSUPAG00010020584) DTX3L (ENSUPAG00010020577) ENSUPAG00010020572 ENSUPAG00010020569 ENSUPAG00010020563 WDR5B (ENSUPAG00010020556) FAM162A (ENSUPAG00010020548) MIX23 (ENSUPAG00010020528) CSTA (ENSUPAG00010020512) Squirrel MODERN SPECIES 325 ZNF148 (ENSSTOG00000027082) SLC12A8 (ENSSTOG00000028300) HEG1 (ENSSTOG00000019628) ITGB5 (ENSSTOG00000007965) UMPS (ENSSTOG00000005682) KALRN (ENSSTOG00000005605) ENSSTOG00000033153 ENSSTOG00000004225 CCDC14 (ENSSTOG00000004201) MYLK (ENSSTOG00000000046) HACD2 (ENSSTOG00000023651) ##22 ADCY5 (ENSSTOG00000000043) SEC22A (ENSSTOG00000000042) PDIA5 (ENSSTOG00000000040) SEMA5B (ENSSTOG00000010313) Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 1 LMLN (ENSSVLG00005010315) OSBPL11 (ENSSVLG00005010177) ENSSVLG00005010146 SNX4 (ENSSVLG00005010065) ZNF148 (ENSSVLG00005009954) SLC12A8 (ENSSVLG00005009841) HEG1 (ENSSVLG00005009706) ENSSVLG00005009672 ITGB5 (ENSSVLG00005009637) UMPS (ENSSVLG00005009595) ENSSVLG00005009580 KALRN (ENSSVLG00005008718) ENSSVLG00005008547 CCDC14 (ENSSVLG00005008304) MYLK (ENSSVLG00005007634) ENSSVLG00005007470 ##22 ADCY5 (ENSSVLG00005007362) SEC22A (ENSSVLG00005007307) PDIA5 (ENSSVLG00005007242) SEMA5B (ENSSVLG00005007095) SLC49A4 (ENSSVLG00005007048) HSPBAP1 (ENSSVLG00005007004) PARP14 (ENSSVLG00005006958) DTX3L (ENSSVLG00005006929) PARP9 (ENSSVLG00005006786) KPNA1 (ENSSVLG00005006713) WDR5B (ENSSVLG00005006686) ENSSVLG00005006652 FAM162A (ENSSVLG00005006569) MIX23 (ENSSVLG00005006490) CSTA (ENSSVLG00005006443) Eurasian red squirrel MODERN SPECIES 16 RCAN2 (ENSSVLG00005004330) CYP39A1 (ENSSVLG00005004271) SLC25A27 (ENSSVLG00005013485) TDRD6 (ENSSVLG00005013379) PLA2G7 (ENSSVLG00005013209) ANKRD66 (ENSSVLG00005013047) MEP1A (ENSSVLG00005012939) ADGRF5 (ENSSVLG00005012696) ADGRF1 (ENSSVLG00005012402) TNFRSF21 (ENSSVLG00005012308) ENSSVLG00005012093 ENSSVLG00005011936 ADGRF4 (ENSSVLG00005011812) OPN5 (ENSSVLG00005011646) PTCHD4 (ENSSVLG00005011584) ENSSVLG00005011560 ##22 MMUT (ENSSVLG00005011506) CENPQ (ENSSVLG00005011381) GLYATL3 (ENSSVLG00005011315) C6orf141 (ENSSVLG00005011288) RHAG (ENSSVLG00005011002) ENSSVLG00005010899 CRISP2 (ENSSVLG00005010832) ENSSVLG00005010778 CRISP3 (ENSSVLG00005010598) ENSSVLG00005010570 ENSSVLG00005010557 CRISP1 (ENSSVLG00005010451) ENSSVLG00005010409 DEFB113 (ENSSVLG00005010331) DEFB110 (ENSSVLG00005010300) Lagomorpha ANCESTRAL SPECIES 9 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00910000147747 ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Rabbit MODERN SPECIES 5 LMLN (ENSOCUG00000001233) OSBPL11 (ENSOCUG00000009660) SNX4 (ENSOCUG00000015447) ZNF148 (ENSOCUG00000029362) SLC12A8 (ENSOCUG00000027393) HEG1 (ENSOCUG00000014625) ENSOCUG00000030671 ENSOCUG00000014614 ITGB5 (ENSOCUG00000014602) ENSOCUG00000039428 UMPS (ENSOCUG00000000412) KALRN (ENSOCUG00000000397) ENSOCUG00000014961 CCDC14 (ENSOCUG00000014950) ENSOCUG00000014935 HACD2 (ENSOCUG00000001175) ##22 ADCY5 (ENSOCUG00000015141) ENSOCUG00000035968 ENSOCUG00000001902 PDIA5 (ENSOCUG00000006151) SEMA5B (ENSOCUG00000006139) SLC49A4 (ENSOCUG00000003434) HSPBAP1 (ENSOCUG00000003430) PARP14 (ENSOCUG00000003418) DTX3L (ENSOCUG00000022941) PARP9 (ENSOCUG00000002699) KPNA1 (ENSOCUG00000002694) WDR5B (ENSOCUG00000030198) FAM162A (ENSOCUG00000002686) ENSOCUG00000021647 MIX23 (ENSOCUG00000002682) Tree shrew MODERN SPECIES 924 MYLK (ENSTBEG00000016341) HACD2 (ENSTBEG00000015730) ##22 ADCY5 (ENSTBEG00000014150) SEC22A (ENSTBEG00000013699) Primates ANCESTRAL SPECIES 1 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00910000147747 ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470.b ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Lemuriformes ANCESTRAL SPECIES 9 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470.b ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Mouse lemur MODERN SPECIES OSBPL11 (ENSMICG00000049504) SNX4 (ENSMICG00000049026) ZNF148 (ENSMICG00000048869) SLC12A8 (ENSMICG00000049518) HEG1 (ENSMICG00000049378) ENSMICG00000049118 ITGB5 (ENSMICG00000049531) ENSMICG00000049354 UMPS (ENSMICG00000049168) ENSMICG00000049482 ENSMICG00000049575 ENSMICG00000048499 CCDC14 (ENSMICG00000048984) ENSMICG00000049443 ENSMICG00000049105 HACD2 (ENSMICG00000049241) ##22 ADCY5 (ENSMICG00000049169) SEC22A (ENSMICG00000049589) ENSMICG00000048877 PDIA5 (ENSMICG00000048975) SLC49A4 (ENSMICG00000048933) HSPBAP1 (ENSMICG00000048921) PARP14 (ENSMICG00000049225) ENSMICG00000049107 DTX3L (ENSMICG00000049420) PARP9 (ENSMICG00000049063) ENSMICG00000049115 KPNA1 (ENSMICG00000048988) WDR5B (ENSMICG00000049311) FAM162A (ENSMICG00000049452) MIX23 (ENSMICG00000049469) Lemuriformes_a ANCESTRAL SPECIES 9 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT00900000143497 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470.b ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Coquerels sifaka MODERN SPECIES 51 IQCG (ENSPCOG00000019036) RPL35A (ENSPCOG00000017629) LMLN (ENSPCOG00000022523) OSBPL11 (ENSPCOG00000014785) SNX4 (ENSPCOG00000023259) ZNF148 (ENSPCOG00000027603) SLC12A8 (ENSPCOG00000013321) HEG1 (ENSPCOG00000022823) ENSPCOG00000012933 ITGB5 (ENSPCOG00000012767) UMPS (ENSPCOG00000012728) KALRN (ENSPCOG00000016297) ENSPCOG00000008132 CCDC14 (ENSPCOG00000021929) MYLK (ENSPCOG00000015942) HACD2 (ENSPCOG00000019866) ##22 ADCY5 (ENSPCOG00000027586) ENSPCOG00000017199 PDIA5 (ENSPCOG00000014955) SEMA5B (ENSPCOG00000014833) HSPBAP1 (ENSPCOG00000025313) PARP14 (ENSPCOG00000007904) PARP15 (ENSPCOG00000025615) DTX3L (ENSPCOG00000014270) PARP9 (ENSPCOG00000023556) KPNA1 (ENSPCOG00000004538) WDR5B (ENSPCOG00000003115) FAM162A (ENSPCOG00000024148) MIX23 (ENSPCOG00000026503) ENSPCOG00000016710 CASR (ENSPCOG00000016201) Greater bamboo lemur MODERN SPECIES 108 ZNF148 (ENSPSMG00000013486) SLC12A8 (ENSPSMG00000013434) HEG1 (ENSPSMG00000013390) ENSPSMG00000013379 ENSPSMG00000013361 ITGB5 (ENSPSMG00000013296) UMPS (ENSPSMG00000013229) KALRN (ENSPSMG00000012673) ENSPSMG00000012046 CCDC14 (ENSPSMG00000012028) MYLK (ENSPSMG00000011980) HACD2 (ENSPSMG00000011896) ##22 ADCY5 (ENSPSMG00000011849) ENSPSMG00000011818 Bushbaby MODERN SPECIES 204 ENSOGAG00000007016 OSBPL11 (ENSOGAG00000002965) ENSOGAG00000029518 SNX4 (ENSOGAG00000003165) ZNF148 (ENSOGAG00000013652) SLC12A8 (ENSOGAG00000027535) HEG1 (ENSOGAG00000025797) ENSOGAG00000014980 ITGB5 (ENSOGAG00000014972) UMPS (ENSOGAG00000005426) KALRN (ENSOGAG00000015184) ENSOGAG00000014563 ENSOGAG00000014562 MYLK (ENSOGAG00000014552) HACD2 (ENSOGAG00000014549) ##22 ADCY5 (ENSOGAG00000014543) SEC22A (ENSOGAG00000012485) PDIA5 (ENSOGAG00000012483) SEMA5B (ENSOGAG00000012477) SLC49A4 (ENSOGAG00000012466) HSPBAP1 (ENSOGAG00000012461) PARP14 (ENSOGAG00000012454) ENSOGAG00000032600 ENSOGAG00000032392 ENSOGAG00000024106 ENSOGAG00000032121 PARP15 (ENSOGAG00000001802) ENSOGAG00000006235 ENSOGAG00000028654 PARP9 (ENSOGAG00000001801) Haplorrhini ANCESTRAL SPECIES 22 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00910000147747 ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f ENSGT00940000155717 Simiiformes ANCESTRAL SPECIES 1 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00910000147747 ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00910000148270 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f ENSGT00940000155717 Platyrrhini ANCESTRAL SPECIES 37 ENSGT00940000160913 ENSGT00950000183042.b ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00910000148270 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f ENSGT00940000155717 Cebidae ANCESTRAL SPECIES 35 ENSGT00940000153786.e.a.a ENSGT00940000160913 ENSGT00950000183042.b ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f ENSGT00940000155717 Cebidae_a ANCESTRAL SPECIES 99 ENSGT00390000012731.a.b.e.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b.e.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f ENSGT00940000155717 Bolivian squirrel monkey MODERN SPECIES 191 ENSSBOG00000033823 ENSSBOG00000029294 OSBPL11 (ENSSBOG00000020548) SNX4 (ENSSBOG00000033510) ZNF148 (ENSSBOG00000017702) SLC12A8 (ENSSBOG00000027784) HEG1 (ENSSBOG00000028060) ENSSBOG00000033551 MUC13 (ENSSBOG00000023391) ITGB5 (ENSSBOG00000020177) UMPS (ENSSBOG00000023619) KALRN (ENSSBOG00000027646) ENSSBOG00000028907 ENSSBOG00000018401 MYLK (ENSSBOG00000011699) HACD2 (ENSSBOG00000018162) ##22 ADCY5 (ENSSBOG00000026273) SEC22A (ENSSBOG00000021440) PDIA5 (ENSSBOG00000024717) SEMA5B (ENSSBOG00000028036) SLC49A4 (ENSSBOG00000025719) HSPBAP1 (ENSSBOG00000018683) PARP14 (ENSSBOG00000032798) PARP15 (ENSSBOG00000019346) DTX3L (ENSSBOG00000025291) PARP9 (ENSSBOG00000024211) KPNA1 (ENSSBOG00000027857) WDR5B (ENSSBOG00000009156) FAM162A (ENSSBOG00000033920) MIX23 (ENSSBOG00000017668) CSTA (ENSSBOG00000032240) Capuchin MODERN SPECIES 387 ENSCCAG00000023998 ENSCCAG00000020251 HACD2 (ENSCCAG00000020808) ##22 ADCY5 (ENSCCAG00000032383) SEC22A (ENSCCAG00000037085) PDIA5 (ENSCCAG00000029106) SEMA5B (ENSCCAG00000031518) SLC49A4 (ENSCCAG00000033341) HSPBAP1 (ENSCCAG00000024244) PARP14 (ENSCCAG00000028961) PARP15 (ENSCCAG00000037492) DTX3L (ENSCCAG00000017964) PARP9 (ENSCCAG00000036930) KPNA1 (ENSCCAG00000034116) WDR5B (ENSCCAG00000000075) FAM162A (ENSCCAG00000026814) MIX23 (ENSCCAG00000037781) CSTA (ENSCCAG00000034510) Marmoset DUPLICATION Marmoset MODERN SPECIES 6 OSBPL11 (ENSCJAG00000006828) ZNF148 (ENSCJAG00000006741) SLC12A8 (ENSCJAG00000006687) HEG1 (ENSCJAG00000006666) MUC13 (ENSCJAG00000006640) ITGB5 (ENSCJAG00000006606) UMPS (ENSCJAG00000006554) KALRN (ENSCJAG00000006440) ENSCJAG00000084441 ENSCJAG00000068654 ENSCJAG00000072260 ENSCJAG00000048078 ENSCJAG00000015908 ENSCJAG00000073509 MYLK (ENSCJAG00000007474) ENSCJAG00000045524 ##22 ADCY5 (ENSCJAG00000007619) SEC22A (ENSCJAG00000007704) PDIA5 (ENSCJAG00000007712) SEMA5B (ENSCJAG00000007825) SLC49A4 (ENSCJAG00000007855) HSPBAP1 (ENSCJAG00000007911) PARP14 (ENSCJAG00000007930) ENSCJAG00000052552 ENSCJAG00000072088 PARP15 (ENSCJAG00000007967) DTX3L (ENSCJAG00000007986) PARP9 (ENSCJAG00000008000) KPNA1 (ENSCJAG00000008033) WDR5B (ENSCJAG00000022130) FAM162A (ENSCJAG00000008116) Marmoset MODERN SPECIES 78 RPS6KA6 (ENSCJAG00000008317) HDX (ENSCJAG00000008295) ENSCJAG00000084688 ENSCJAG00000076835 ENSCJAG00000008249 ZNF711 (ENSCJAG00000010311) POF1B (ENSCJAG00000010342) ENSCJAG00000080789 CHM (ENSCJAG00000010392) DACH2 (ENSCJAG00000010422) KLHL4 (ENSCJAG00000010479) ENSCJAG00000073801 ENSCJAG00000076138 ENSCJAG00000080852 ENSCJAG00000077709 ENSCJAG00000041536 ##22 ENSCJAG00000087079 ENSCJAG00000061435 ENSCJAG00000081922 ENSCJAG00000060149 ENSCJAG00000057658 ENSCJAG00000077358 PABPC5 (ENSCJAG00000003665) ENSCJAG00000003672 ENSCJAG00000054882 NAP1L3 (ENSCJAG00000072661) ENSCJAG00000042402 ENSCJAG00000069593 ENSCJAG00000069701 ENSCJAG00000022740 ENSCJAG00000084273 Mas night monkey MODERN SPECIES 762 MYLK (ENSANAG00000024928) ENSANAG00000024584 HACD2 (ENSANAG00000032529) ##22 ADCY5 (ENSANAG00000031996) SEC22A (ENSANAG00000035634) PDIA5 (ENSANAG00000021231) SEMA5B (ENSANAG00000035006) SLC49A4 (ENSANAG00000030285) HSPBAP1 (ENSANAG00000023691) PARP14 (ENSANAG00000030799) DTX3L (ENSANAG00000035577) PARP9 (ENSANAG00000023668) KPNA1 (ENSANAG00000029902) WDR5B (ENSANAG00000031504) FAM162A (ENSANAG00000036711) MIX23 (ENSANAG00000028818) CSTA (ENSANAG00000021670) CASR (ENSANAG00000032020) Catarrhini ANCESTRAL SPECIES 2 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00910000147747 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00910000148270 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f ENSGT00940000155717 Hominoidea ANCESTRAL SPECIES 2 ENSGT00390000012731.a.b.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00910000147747 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00910000148270 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f ENSGT00940000155717 Hominidae ANCESTRAL SPECIES 2 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00910000147747 ENSGT00710000106813.A ENSGT00910000148428 ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00910000148270 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f ENSGT00940000155717 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00930000151029 ENSGT00940000169826 ENSGT00940000157406 ENSGT00940000160130 ENSGT00910000147747 ENSGT00710000106813.A ENSGT00910000148428 ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00910000148270 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000166143.A.a.b.a.b.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f Gorilla MODERN SPECIES 16 ENSGGOG00000038953 OSBPL11 (ENSGGOG00000007521) SNX4 (ENSGGOG00000026239) ENSGGOG00000025931 ZNF148 (ENSGGOG00000038978) SLC12A8 (ENSGGOG00000005497) ENSGGOG00000040608 HEG1 (ENSGGOG00000007120) MUC13 (ENSGGOG00000000425) ITGB5 (ENSGGOG00000011869) UMPS (ENSGGOG00000014137) KALRN (ENSGGOG00000001597) ENSGGOG00000040479 CCDC14 (ENSGGOG00000006811) MYLK (ENSGGOG00000016624) HACD2 (ENSGGOG00000000441) ##22 ADCY5 (ENSGGOG00000025276) SEC22A (ENSGGOG00000002460) PDIA5 (ENSGGOG00000006726) SEMA5B (ENSGGOG00000007601) SLC49A4 (ENSGGOG00000000449) HSPBAP1 (ENSGGOG00000000446) PARP14 (ENSGGOG00000001623) ENSGGOG00000039401 PARP15 (ENSGGOG00000025733) ENSGGOG00000039543 DTX3L (ENSGGOG00000015979) PARP9 (ENSGGOG00000015971) KPNA1 (ENSGGOG00000015957) WDR5B (ENSGGOG00000003266) FAM162A (ENSGGOG00000022758) Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00930000151029 ENSGT00940000169826 ENSGT00940000157406 ENSGT00940000160130 ENSGT00910000147747 ENSGT00710000106813.A ENSGT00910000148428 ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00910000148270 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000166143.A.a.b.a.b.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f Pan ANCESTRAL SPECIES 2 ENSGT00930000151029 ENSGT00940000169826 ENSGT00940000157406 ENSGT00940000160130 ENSGT00910000147747 ENSGT00710000106813.A ENSGT00910000148428 ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00910000148270 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000166143.A.a.b.a.b.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f Chimpanzee MODERN SPECIES 16 OSBPL11 (ENSPTRG00000015321) SNX4 (ENSPTRG00000015320) ENSPTRG00000043905 ZNF148 (ENSPTRG00000049121) SLC12A8 (ENSPTRG00000015317) ENSPTRG00000044346 HEG1 (ENSPTRG00000015315) ENSPTRG00000051897 MUC13 (ENSPTRG00000015314) ITGB5 (ENSPTRG00000015313) UMPS (ENSPTRG00000015312) KALRN (ENSPTRG00000015311) ROPN1 (ENSPTRG00000015326) CCDC14 (ENSPTRG00000015308) MYLK (ENSPTRG00000015307) HACD2 (ENSPTRG00000030147) ##22 ADCY5 (ENSPTRG00000015304) SEC22A (ENSPTRG00000015303) PDIA5 (ENSPTRG00000015302) SEMA5B (ENSPTRG00000015301) SLC49A4 (ENSPTRG00000015299) HSPBAP1 (ENSPTRG00000015298) PARP14 (ENSPTRG00000015297) ENSPTRG00000047671 ENSPTRG00000051731 PARP15 (ENSPTRG00000015296) ENSPTRG00000050279 DTX3L (ENSPTRG00000015295) PARP9 (ENSPTRG00000015294) KPNA1 (ENSPTRG00000015293) WDR5B (ENSPTRG00000030152) Bonobo MODERN SPECIES 16 ENSPPAG00000034962 OSBPL11 (ENSPPAG00000036774) SNX4 (ENSPPAG00000028614) ZNF148 (ENSPPAG00000042094) SLC12A8 (ENSPPAG00000043521) ENSPPAG00000041325 HEG1 (ENSPPAG00000041079) MUC13 (ENSPPAG00000040187) ITGB5 (ENSPPAG00000020906) UMPS (ENSPPAG00000028773) KALRN (ENSPPAG00000029462) ROPN1 (ENSPPAG00000034510) CCDC14 (ENSPPAG00000022204) MYLK (ENSPPAG00000029749) ENSPPAG00000038655 ENSPPAG00000039702 ##22 ADCY5 (ENSPPAG00000036087) SEC22A (ENSPPAG00000030243) PDIA5 (ENSPPAG00000027223) SEMA5B (ENSPPAG00000027968) SLC49A4 (ENSPPAG00000039730) HSPBAP1 (ENSPPAG00000012941) PARP14 (ENSPPAG00000039852) PARP15 (ENSPPAG00000032565) ENSPPAG00000014687 DTX3L (ENSPPAG00000025871) PARP9 (ENSPPAG00000043447) KPNA1 (ENSPPAG00000038484) WDR5B (ENSPPAG00000023737) FAM162A (ENSPPAG00000029084) MIX23 (ENSPPAG00000028374) Human MODERN SPECIES 15 ALDH1L1 (ENSG00000144908) SLC41A3 (ENSG00000114544) ROPN1B (ENSG00000114547) OSBPL11 (ENSG00000144909) SNX4 (ENSG00000114520) ZNF148 (ENSG00000163848) SLC12A8 (ENSG00000221955) HEG1 (ENSG00000173706) MUC13 (ENSG00000173702) ITGB5 (ENSG00000082781) UMPS (ENSG00000114491) KALRN (ENSG00000160145) ROPN1 (ENSG00000065371) CCDC14 (ENSG00000175455) MYLK (ENSG00000065534) HACD2 (ENSG00000206527) ##22 ADCY5 (ENSG00000173175) SEC22A (ENSG00000121542) PDIA5 (ENSG00000065485) SEMA5B (ENSG00000082684) SLC49A4 (ENSG00000138463) HSPBAP1 (ENSG00000169087) PARP14 (ENSG00000173193) PARP15 (ENSG00000173200) DTX3L (ENSG00000163840) PARP9 (ENSG00000138496) KPNA1 (ENSG00000114030) WDR5B (ENSG00000196981) FAM162A (ENSG00000114023) MIX23 (ENSG00000160124) CSTA (ENSG00000121552) Orangutan MODERN SPECIES 16 SLC41A3 (ENSPPYG00000013457) ROPN1B (ENSPPYG00000013469) OSBPL11 (ENSPPYG00000013460) SNX4 (ENSPPYG00000013461) ZNF148 (ENSPPYG00000013462) SLC12A8 (ENSPPYG00000035042) HEG1 (ENSPPYG00000013464) ENSPPYG00000040837 MUC13 (ENSPPYG00000013465) ITGB5 (ENSPPYG00000013466) UMPS (ENSPPYG00000013467) KALRN (ENSPPYG00000013468) ROPN1 (ENSPPYG00000013458) CCDC14 (ENSPPYG00000013470) MYLK (ENSPPYG00000013471) HACD2 (ENSPPYG00000037558) ##22 ADCY5 (ENSPPYG00000013473) SEC22A (ENSPPYG00000013474) PDIA5 (ENSPPYG00000013475) SEMA5B (ENSPPYG00000013476) SLC49A4 (ENSPPYG00000013477) HSPBAP1 (ENSPPYG00000013478) PARP14 (ENSPPYG00000013479) PARP15 (ENSPPYG00000013480) DTX3L (ENSPPYG00000013481) PARP9 (ENSPPYG00000013482) KPNA1 (ENSPPYG00000013483) WDR5B (ENSPPYG00000013484) FAM162A (ENSPPYG00000013485) MIX23 (ENSPPYG00000013486) CSTA (ENSPPYG00000013487) Gibbon MODERN SPECIES 13 ALDH1L1 (ENSNLEG00000000948) SLC41A3 (ENSNLEG00000000891) ENSNLEG00000000885 OSBPL11 (ENSNLEG00000000858) SNX4 (ENSNLEG00000000820) ZNF148 (ENSNLEG00000029043) SLC12A8 (ENSNLEG00000000716) HEG1 (ENSNLEG00000027056) MUC13 (ENSNLEG00000000702) ITGB5 (ENSNLEG00000000687) UMPS (ENSNLEG00000000631) KALRN (ENSNLEG00000000523) ROPN1 (ENSNLEG00000000508) CCDC14 (ENSNLEG00000000474) MYLK (ENSNLEG00000000375) HACD2 (ENSNLEG00000035767) ##22 ADCY5 (ENSNLEG00000000337) SEC22A (ENSNLEG00000000332) ENSNLEG00000000330 SEMA5B (ENSNLEG00000000318) SLC49A4 (ENSNLEG00000000315) HSPBAP1 (ENSNLEG00000000313) PARP14 (ENSNLEG00000000311) ENSNLEG00000035299 DTX3L (ENSNLEG00000034825) PARP9 (ENSNLEG00000000303) KPNA1 (ENSNLEG00000000296) WDR5B (ENSNLEG00000018651) FAM162A (ENSNLEG00000000293) MIX23 (ENSNLEG00000000291) CSTA (ENSNLEG00000000289) Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00390000012731.a.b.c.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00910000147747 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155248 ENSGT00390000012731.a.b.c.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f ENSGT00940000155717 Rhinopithecus ANCESTRAL SPECIES 273 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00910000147747 ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b.c.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b Golden snub-nosed monkey MODERN SPECIES 2965 OSBPL11 (ENSRROG00000038957) SNX4 (ENSRROG00000011175) ZNF148 (ENSRROG00000037586) SLC12A8 (ENSRROG00000045494) HEG1 (ENSRROG00000033748) ENSRROG00000034907 MUC13 (ENSRROG00000042310) ENSRROG00000041787 ITGB5 (ENSRROG00000034675) UMPS (ENSRROG00000041509) KALRN (ENSRROG00000045195) ENSRROG00000035043 CCDC14 (ENSRROG00000045664) MYLK (ENSRROG00000008666) HACD2 (ENSRROG00000031987) ##22 Black snub-nosed monkey MODERN SPECIES 1765 OSBPL11 (ENSRBIG00000031485) SNX4 (ENSRBIG00000043044) ZNF148 (ENSRBIG00000026714) SLC12A8 (ENSRBIG00000041661) HEG1 (ENSRBIG00000044003) ENSRBIG00000028159 MUC13 (ENSRBIG00000033784) ITGB5 (ENSRBIG00000039016) UMPS (ENSRBIG00000044165) KALRN (ENSRBIG00000044932) ENSRBIG00000035186 CCDC14 (ENSRBIG00000033930) MYLK (ENSRBIG00000035470) HACD2 (ENSRBIG00000036233) ##22 ADCY5 (ENSRBIG00000040842) SEC22A (ENSRBIG00000033400) PDIA5 (ENSRBIG00000033250) SEMA5B (ENSRBIG00000043895) SLC49A4 (ENSRBIG00000033591) HSPBAP1 (ENSRBIG00000040416) PARP14 (ENSRBIG00000042403) Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00390000012731.a.b.c.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00910000147747 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155248 ENSGT00390000012731.a.b.c.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f ENSGT00940000155717 Vervet Monkey MODERN SPECIES 14 ENSCSAG00000008030 ALDH1L1 (ENSCSAG00000008021) SLC41A3 (ENSCSAG00000008006) ENSCSAG00000008002 OSBPL11 (ENSCSAG00000007995) SNX4 (ENSCSAG00000007987) ZNF148 (ENSCSAG00000007972) SLC12A8 (ENSCSAG00000007945) HEG1 (ENSCSAG00000007901) MUC13 (ENSCSAG00000007891) ITGB5 (ENSCSAG00000007851) UMPS (ENSCSAG00000007770) KALRN (ENSCSAG00000007752) ENSCSAG00000007713 MYLK (ENSCSAG00000007684) HACD2 (ENSCSAG00000007593) ##22 ADCY5 (ENSCSAG00000007583) SEC22A (ENSCSAG00000007573) PDIA5 (ENSCSAG00000007564) SEMA5B (ENSCSAG00000007531) SLC49A4 (ENSCSAG00000007473) HSPBAP1 (ENSCSAG00000007468) PARP14 (ENSCSAG00000007464) PARP15 (ENSCSAG00000007452) DTX3L (ENSCSAG00000007418) PARP9 (ENSCSAG00000007401) KPNA1 (ENSCSAG00000007394) WDR5B (ENSCSAG00000018716) FAM162A (ENSCSAG00000007388) MIX23 (ENSCSAG00000007385) CSTA (ENSCSAG00000007377) Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00390000012731.a.b.c.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00910000147747 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155248 ENSGT00390000012731.a.b.c.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000153336.e.b.a.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f Macaca ANCESTRAL SPECIES 5 ENSGT00950000183042.b ENSGT00390000012731.a.b.c.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155248 ENSGT00390000012731.a.b.c.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000153336.e.b.a.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f Pig-tailed macaque MODERN SPECIES 453 ENSMNEG00000028740 ENSMNEG00000042034 OSBPL11 (ENSMNEG00000034069) SNX4 (ENSMNEG00000038265) ZNF148 (ENSMNEG00000045376) SLC12A8 (ENSMNEG00000037119) HEG1 (ENSMNEG00000038476) MUC13 (ENSMNEG00000042885) ITGB5 (ENSMNEG00000043176) UMPS (ENSMNEG00000036781) ENSMNEG00000035337 KALRN (ENSMNEG00000040018) ENSMNEG00000044347 CCDC14 (ENSMNEG00000044926) MYLK (ENSMNEG00000038322) HACD2 (ENSMNEG00000028859) ##22 ADCY5 (ENSMNEG00000043685) SEC22A (ENSMNEG00000039862) PDIA5 (ENSMNEG00000045311) SEMA5B (ENSMNEG00000041415) SLC49A4 (ENSMNEG00000012572) HSPBAP1 (ENSMNEG00000042637) PARP14 (ENSMNEG00000035861) ENSMNEG00000041946 PARP15 (ENSMNEG00000039252) DTX3L (ENSMNEG00000038749) PARP9 (ENSMNEG00000033549) KPNA1 (ENSMNEG00000040844) WDR5B (ENSMNEG00000018966) FAM162A (ENSMNEG00000036945) MIX23 (ENSMNEG00000041513) Macaca_a ANCESTRAL SPECIES 5 ENSGT00950000183042.b ENSGT00390000012731.a.b.c.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b.c.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00940000161627.a.a.a.b.b.b.b.a.b.a.a.a.b ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000153336.e.b.a.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f Crab-eating macaque MODERN SPECIES 11 OSBPL11 (ENSMFAG00000044778) ENSMFAG00000059178 SNX4 (ENSMFAG00000040321) ZNF148 (ENSMFAG00000032538) SLC12A8 (ENSMFAG00000036324) HEG1 (ENSMFAG00000002554) ENSMFAG00000061926 MUC13 (ENSMFAG00000038825) ITGB5 (ENSMFAG00000008012) UMPS (ENSMFAG00000002273) KALRN (ENSMFAG00000043685) ENSMFAG00000041234 CCDC14 (ENSMFAG00000031262) MYLK (ENSMFAG00000040304) ENSMFAG00000056124 HACD2 (ENSMFAG00000037506) ##22 ADCY5 (ENSMFAG00000003197) SEC22A (ENSMFAG00000038056) PDIA5 (ENSMFAG00000030776) SEMA5B (ENSMFAG00000002408) SLC49A4 (ENSMFAG00000063644) HSPBAP1 (ENSMFAG00000045898) PARP14 (ENSMFAG00000038097) ENSMFAG00000033728 PARP15 (ENSMFAG00000026206) KPNA1 (ENSMFAG00000046020) DTX3L (ENSMFAG00000031102) PARP9 (ENSMFAG00000030796) FAM162A (ENSMFAG00000031641) MIX23 (ENSMFAG00000028753) CSTA (ENSMFAG00000044624) Rhesus MODERN SPECIES 11 ENSMMUG00000011613 ENSMMUG00000052136 OSBPL11 (ENSMMUG00000017125) SNX4 (ENSMMUG00000011106) ZNF148 (ENSMMUG00000001169) SLC12A8 (ENSMMUG00000048732) HEG1 (ENSMMUG00000032005) MUC13 (ENSMMUG00000014184) ITGB5 (ENSMMUG00000014516) UMPS (ENSMMUG00000032009) KALRN (ENSMMUG00000003851) ENSMMUG00000062777 CCDC14 (ENSMMUG00000008301) MYLK (ENSMMUG00000014818) ENSMMUG00000064330 HACD2 (ENSMMUG00000002232) ##22 ADCY5 (ENSMMUG00000002230) SEC22A (ENSMMUG00000007702) PDIA5 (ENSMMUG00000007696) SEMA5B (ENSMMUG00000010034) SLC49A4 (ENSMMUG00000022573) ENSMMUG00000058894 HSPBAP1 (ENSMMUG00000022572) PARP14 (ENSMMUG00000022569) PARP15 (ENSMMUG00000020547) DTX3L (ENSMMUG00000056594) PARP9 (ENSMMUG00000016381) KPNA1 (ENSMMUG00000016379) WDR5B (ENSMMUG00000016378) FAM162A (ENSMMUG00000016377) MIX23 (ENSMMUG00000047586) Cercopithecinae_b ANCESTRAL SPECIES ENSGT00950000183042.b ENSGT00390000012731.a.b.c.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00910000147747 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b.c.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000153336.e.b.a.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053.f Olive baboon MODERN SPECIES 11 ENSPANG00000043961 OSBPL11 (ENSPANG00000018912) SNX4 (ENSPANG00000017631) ZNF148 (ENSPANG00000004284) SLC12A8 (ENSPANG00000007653) HEG1 (ENSPANG00000006172) MUC13 (ENSPANG00000007695) ITGB5 (ENSPANG00000018467) UMPS (ENSPANG00000019863) KALRN (ENSPANG00000006705) ENSPANG00000038629 ENSPANG00000037540 CCDC14 (ENSPANG00000015226) ENSPANG00000042485 MYLK (ENSPANG00000023054) HACD2 (ENSPANG00000026370) ##22 ENSPANG00000018914 SEC22A (ENSPANG00000007784) PDIA5 (ENSPANG00000019864) SEMA5B (ENSPANG00000033089) SLC49A4 (ENSPANG00000007785) HSPBAP1 (ENSPANG00000000523) PARP14 (ENSPANG00000000522) ENSPANG00000033749 PARP15 (ENSPANG00000022333) DTX3L (ENSPANG00000023613) PARP9 (ENSPANG00000022289) KPNA1 (ENSPANG00000023614) WDR5B (ENSPANG00000015873) FAM162A (ENSPANG00000019143) MIX23 (ENSPANG00000007394) Cercopithecinae_d ANCESTRAL SPECIES 58 ENSGT00950000183042.b ENSGT00390000012731.a.b.c.a ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00910000147747 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b.c.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000153336.e.b.a.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00910000148218 ENSGT00940000154143.f ENSGT00640000091497.a Drill MODERN SPECIES 282 SLC41A3 (ENSMLEG00000005633) ENSMLEG00000043465 ENSMLEG00000000692 OSBPL11 (ENSMLEG00000028964) SNX4 (ENSMLEG00000031753) ZNF148 (ENSMLEG00000040170) SLC12A8 (ENSMLEG00000029110) HEG1 (ENSMLEG00000037378) MUC13 (ENSMLEG00000036270) ITGB5 (ENSMLEG00000040779) UMPS (ENSMLEG00000036757) KALRN (ENSMLEG00000028641) ENSMLEG00000033192 CCDC14 (ENSMLEG00000042813) MYLK (ENSMLEG00000031399) HACD2 (ENSMLEG00000043255) ##22 ADCY5 (ENSMLEG00000036703) SEC22A (ENSMLEG00000035199) PDIA5 (ENSMLEG00000043285) SEMA5B (ENSMLEG00000037362) SLC49A4 (ENSMLEG00000031621) HSPBAP1 (ENSMLEG00000034093) PARP14 (ENSMLEG00000041852) ENSMLEG00000037793 ENSMLEG00000006274 PARP15 (ENSMLEG00000034001) DTX3L (ENSMLEG00000028223) PARP9 (ENSMLEG00000037849) KPNA1 (ENSMLEG00000030179) ENSMLEG00000025131 WDR5B (ENSMLEG00000027036) Sooty mangabey MODERN SPECIES 149 ENSCATG00000009859 OSBPL11 (ENSCATG00000039022) SNX4 (ENSCATG00000039545) ENSCATG00000041681 ZNF148 (ENSCATG00000032676) SLC12A8 (ENSCATG00000041565) ENSCATG00000038752 HEG1 (ENSCATG00000035383) MUC13 (ENSCATG00000010943) ITGB5 (ENSCATG00000036722) UMPS (ENSCATG00000034479) KALRN (ENSCATG00000029527) ENSCATG00000034888 CCDC14 (ENSCATG00000042244) MYLK (ENSCATG00000041417) HACD2 (ENSCATG00000027580) ##22 ADCY5 (ENSCATG00000036726) SEC22A (ENSCATG00000032303) PDIA5 (ENSCATG00000041167) SEMA5B (ENSCATG00000032571) SLC49A4 (ENSCATG00000033232) HSPBAP1 (ENSCATG00000031999) PARP14 (ENSCATG00000033839) ENSCATG00000028753 PARP15 (ENSCATG00000039420) DTX3L (ENSCATG00000038398) PARP9 (ENSCATG00000033365) ENSCATG00000038570 KPNA1 (ENSCATG00000039950) WDR5B (ENSCATG00000002794) FAM162A (ENSCATG00000032959) Tarsier MODERN SPECIES 3088 HACD2 (ENSTSYG00000006709) ##22 ADCY5 (ENSTSYG00000004991) SEC22A (ENSTSYG00000012069) PDIA5 (ENSTSYG00000013912) SEMA5B (ENSTSYG00000012425) DIRC2 (ENSTSYG00000005643) HSPBAP1 (ENSTSYG00000005624) PARP14 (ENSTSYG00000005576) PARP15 (ENSTSYG00000005192) DTX3L (ENSTSYG00000014035) PARP9 (ENSTSYG00000014032) ENSTSYG00000036078 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Artiodactyla ANCESTRAL SPECIES 2 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Suina ANCESTRAL SPECIES 1 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Pig MODERN SPECIES 4 SNX4 (ENSSSCG00000036828) ZNF148 (ENSSSCG00000011858) SLC12A8 (ENSSSCG00000011860) HEG1 (ENSSSCG00000011859) MUC13 (ENSSSCG00000011862) ITGB5 (ENSSSCG00000037905) ENSSSCG00000038756 UMPS (ENSSSCG00000011864) ENSSSCG00000030362 ENSSSCG00000021656 ENSSSCG00000059588 ENSSSCG00000051851 ENSSSCG00000028717 CCDC14 (ENSSSCG00000025349) MYLK (ENSSSCG00000011867) HACD2 (ENSSSCG00000034786) ##22 ADCY5 (ENSSSCG00000027952) SEC22A (ENSSSCG00000024904) PDIA5 (ENSSSCG00000011870) ENSSSCG00000041693 SEMA5B (ENSSSCG00000011872) SLC49A4 (ENSSSCG00000036766) HSPBAP1 (ENSSSCG00000011873) PARP14 (ENSSSCG00000011874) ENSSSCG00000011875 DTX3L (ENSSSCG00000011876) PARP9 (ENSSSCG00000027709) KPNA1 (ENSSSCG00000028475) WDR5B (ENSSSCG00000053171) FAM162A (ENSSSCG00000026990) MIX23 (ENSSSCG00000025107) Chacoan peccary MODERN SPECIES 944 OSBPL11 (ENSCWAG00000021058) SNX4 (ENSCWAG00000021074) ZNF148 (ENSCWAG00000021091) SLC12A8 (ENSCWAG00000021107) ENSCWAG00000021122 ENSCWAG00000021131 ITGB5 (ENSCWAG00000021147) ENSCWAG00000021156 UMPS (ENSCWAG00000021162) KALRN (ENSCWAG00000021193) ENSCWAG00000021343 CCDC14 (ENSCWAG00000021356) ENSCWAG00000021384 ENSCWAG00000021389 ENSCWAG00000021397 HACD2 (ENSCWAG00000021405) ##22 ADCY5 (ENSCWAG00000021412) SEC22A (ENSCWAG00000021426) PDIA5 (ENSCWAG00000021435) SEMA5B (ENSCWAG00000021456) SLC49A4 (ENSCWAG00000021505) HSPBAP1 (ENSCWAG00000021512) PARP14 (ENSCWAG00000021542) ENSCWAG00000021569 ENSCWAG00000021574 DTX3L (ENSCWAG00000021586) PARP9 (ENSCWAG00000021593) KPNA1 (ENSCWAG00000021602) WDR5B (ENSCWAG00000021606) FAM162A (ENSCWAG00000021610) MIX23 (ENSCWAG00000021615) Artiodactyla_a ANCESTRAL SPECIES 8 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Artiodactyla_b ANCESTRAL SPECIES 6 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000164270.a.b Cetacea ANCESTRAL SPECIES 10 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000182891.a.a.b.a.a.a.b.a.a ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000164270.a.b Odontoceti ANCESTRAL SPECIES 9 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT00900000143497 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00390000012138.a.a.j ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Odontoceti_a ANCESTRAL SPECIES 8 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406.z ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT00900000143497 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000182891.a.a.b.a.a.a.b.a.a ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00390000012138.a.a.j ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Dolphin MODERN SPECIES 1970 MYLK (ENSTTRG00000000599) HACD2 (ENSTTRG00000000596) ##22 ADCY5 (ENSTTRG00000000594) Odontoceti_b ANCESTRAL SPECIES 9 ENSGT00940000158398 ENSGT00930000151029 ENSGT00390000007701.p ENSGT00940000157406.z ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT00900000143497 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000182891.a.a.b.a.a.a.b.a.a ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00390000012138.a.a.j ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Vaquita MODERN SPECIES 15 ENSPSNG00000021375 ENSPSNG00000021386 ZNF148 (ENSPSNG00000021408) SLC12A8 (ENSPSNG00000021444) HEG1 (ENSPSNG00000006552) ENSPSNG00000006596 ENSPSNG00000006618 ITGB5 (ENSPSNG00000006664) ENSPSNG00000006704 UMPS (ENSPSNG00000006735) KALRN (ENSPSNG00000006817) ENSPSNG00000006935 CCDC14 (ENSPSNG00000007016) ENSPSNG00000007115 MYLK (ENSPSNG00000007160) HACD2 (ENSPSNG00000007252) ##22 ADCY5 (ENSPSNG00000007320) SEC22A (ENSPSNG00000007668) PDIA5 (ENSPSNG00000007727) SEMA5B (ENSPSNG00000007788) SLC49A4 (ENSPSNG00000008120) HSPBAP1 (ENSPSNG00000008141) PARP14 (ENSPSNG00000008175) ENSPSNG00000008285 DTX3L (ENSPSNG00000008319) PARP9 (ENSPSNG00000008365) KPNA1 (ENSPSNG00000008414) ENSPSNG00000008472 WDR5B (ENSPSNG00000008522) MIX23 (ENSPSNG00000008563) CSTA (ENSPSNG00000008625) Monodontidae ANCESTRAL SPECIES 11 ENSGT00530000063881.a.a.p ENSGT00930000151029 ENSGT00390000007701.p ENSGT00940000157406.z ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT00900000143497 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000182891.a.a.b.a.a.a.b.a.a ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00390000012138.a.a.j ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Beluga whale MODERN SPECIES 111 SNX4 (ENSDLEG00000018885) ENSDLEG00000018867 ZNF148 (ENSDLEG00000018840) SLC12A8 (ENSDLEG00000018802) ENSDLEG00000018791 ENSDLEG00000018785 ENSDLEG00000018779 ENSDLEG00000018774 ITGB5 (ENSDLEG00000018618) UMPS (ENSDLEG00000018588) KALRN (ENSDLEG00000011892) ROPN1 (ENSDLEG00000011302) CCDC14 (ENSDLEG00000011257) ENSDLEG00000011243 MYLK (ENSDLEG00000011160) HACD2 (ENSDLEG00000011133) ##22 ADCY5 (ENSDLEG00000011089) SEC22A (ENSDLEG00000011068) PDIA5 (ENSDLEG00000011006) SEMA5B (ENSDLEG00000010954) DIRC2 (ENSDLEG00000010931) HSPBAP1 (ENSDLEG00000010902) PARP14 (ENSDLEG00000010844) ENSDLEG00000010816 DTX3L (ENSDLEG00000010794) PARP9 (ENSDLEG00000010772) KPNA1 (ENSDLEG00000010738) WDR5B (ENSDLEG00000010730) FAM162A (ENSDLEG00000010716) CCDC58 (ENSDLEG00000010690) CSTA (ENSDLEG00000010674) Narwhal MODERN SPECIES 297 ENSMMNG00015006812 SNX4 (ENSMMNG00015006775) ENSMMNG00015006757 ZNF148 (ENSMMNG00015006739) SLC12A8 (ENSMMNG00015006712) HEG1 (ENSMMNG00015006663) ENSMMNG00015006639 ENSMMNG00015006618 ITGB5 (ENSMMNG00015006575) UMPS (ENSMMNG00015006540) KALRN (ENSMMNG00015006326) ENSMMNG00015006196 CCDC14 (ENSMMNG00015006160) ENSMMNG00015006133 MYLK (ENSMMNG00015006066) HACD2 (ENSMMNG00015006026) ##22 ADCY5 (ENSMMNG00015005867) SEC22A (ENSMMNG00015005763) PDIA5 (ENSMMNG00015005725) SEMA5B (ENSMMNG00015005636) SLC49A4 (ENSMMNG00015005591) HSPBAP1 (ENSMMNG00015005568) PARP14 (ENSMMNG00015005535) ENSMMNG00015005518 DTX3L (ENSMMNG00015005502) PARP9 (ENSMMNG00015005477) KPNA1 (ENSMMNG00015005449) WDR5B (ENSMMNG00015005437) FAM162A (ENSMMNG00015005417) MIX23 (ENSMMNG00015005386) CSTA (ENSMMNG00015005369) Sperm whale MODERN SPECIES LRCH3 (ENSPCTG00005004103) IQCG (ENSPCTG00005004542) ENSPCTG00005004591 RPL35A (ENSPCTG00005004674) OSBPL11 (ENSPCTG00005004841) SNX4 (ENSPCTG00005004955) ENSPCTG00005005089 ZNF148 (ENSPCTG00005005129) HEG1 (ENSPCTG00005005184) ENSPCTG00005005322 UMPS (ENSPCTG00005005735) KALRN (ENSPCTG00005005816) ROPN1 (ENSPCTG00005006104) CCDC14 (ENSPCTG00005006155) MYLK (ENSPCTG00005006347) HACD2 (ENSPCTG00005006447) ##22 ADCY5 (ENSPCTG00005006482) SEC22A (ENSPCTG00005006680) PDIA5 (ENSPCTG00005006721) SEMA5B (ENSPCTG00005006790) SLC49A4 (ENSPCTG00005006992) HSPBAP1 (ENSPCTG00005007032) PARP14 (ENSPCTG00005007065) ENSPCTG00005007128 DTX3L (ENSPCTG00005007151) PARP9 (ENSPCTG00005007217) KPNA1 (ENSPCTG00005007272) WDR5B (ENSPCTG00005007311) FAM162A (ENSPCTG00005007327) CCDC58 (ENSPCTG00005007365) CSTA (ENSPCTG00005007431) Blue whale MODERN SPECIES 15 OSBPL11 (ENSBMSG00010004974) SNX4 (ENSBMSG00010004980) ZNF148 (ENSBMSG00010004984) SLC12A8 (ENSBMSG00010004989) HEG1 (ENSBMSG00010005004) ENSBMSG00010005025 ENSBMSG00010005029 ITGB5 (ENSBMSG00010005041) ENSBMSG00010005058 UMPS (ENSBMSG00010005069) KALRN (ENSBMSG00010005144) ENSBMSG00010005299 CCDC14 (ENSBMSG00010005330) ENSBMSG00010005362 MYLK (ENSBMSG00010005442) HACD2 (ENSBMSG00010005559) ##22 ADCY5 (ENSBMSG00010005575) SEC22A (ENSBMSG00010005634) PDIA5 (ENSBMSG00010005649) SEMA5B (ENSBMSG00010005669) SLC49A4 (ENSBMSG00010005708) HSPBAP1 (ENSBMSG00010005720) PARP14 (ENSBMSG00010005743) ENSBMSG00010005761 DTX3L (ENSBMSG00010005778) PARP9 (ENSBMSG00010005809) KPNA1 (ENSBMSG00010005822) WDR5B (ENSBMSG00010005836) FAM162A (ENSBMSG00010005850) MIX23 (ENSBMSG00010005871) CSTA (ENSBMSG00010005884) Pecora ANCESTRAL SPECIES 8 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000164270.a.b Percora_a ANCESTRAL SPECIES 7 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00990000210901 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Bovidae ANCESTRAL SPECIES 9 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00990000210901 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Caprinae ANCESTRAL SPECIES 8 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00950000182825.A.a.b.a.b.a.b.b ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d.g ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00990000210901 ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Goat MODERN SPECIES OSBPL11 (ENSCHIG00000025905) SNX4 (ENSCHIG00000013494) ZNF148 (ENSCHIG00000017965) SLC12A8 (ENSCHIG00000022664) ENSCHIG00000004756 ENSCHIG00000015139 ENSCHIG00000021179 ENSCHIG00000002626 ITGB5 (ENSCHIG00000016526) UMPS (ENSCHIG00000025149) KALRN (ENSCHIG00000008445) ENSCHIG00000014975 CCDC14 (ENSCHIG00000025135) ENSCHIG00000013661 MYLK (ENSCHIG00000015809) HACD2 (ENSCHIG00000023596) ##22 ADCY5 (ENSCHIG00000022874) SEC22A (ENSCHIG00000014542) PDIA5 (ENSCHIG00000027169) SEMA5B (ENSCHIG00000021175) SLC49A4 (ENSCHIG00000021335) HSPBAP1 (ENSCHIG00000022369) PARP14 (ENSCHIG00000018391) DTX3L (ENSCHIG00000023709) PARP9 (ENSCHIG00000016137) KPNA1 (ENSCHIG00000026483) WDR5B (ENSCHIG00000015357) FAM162A (ENSCHIG00000024927) MIX23 (ENSCHIG00000010750) CSTA (ENSCHIG00000017256) CASR (ENSCHIG00000026972) Rambouillet Sheep MODERN SPECIES ENSOARG00020001437 LMLN (ENSOARG00020001272) ENSOARG00020001218 OSBPL11 (ENSOARG00020001185) SNX4 (ENSOARG00020001168) ZNF148 (ENSOARG00020001132) SLC12A8 (ENSOARG00020001097) ENSOARG00020001083 ENSOARG00020001075 ENSOARG00020001057 ITGB5 (ENSOARG00020001033) UMPS (ENSOARG00020001013) KALRN (ENSOARG00020000470) ROPN1 (ENSOARG00020000351) MYLK (ENSOARG00020000157) HACD2 (ENSOARG00020000118) ##22 ADCY5 (ENSOARG00020010155) SEC22A (ENSOARG00020009891) PDIA5 (ENSOARG00020009784) SEMA5B (ENSOARG00020009683) SLC49A4 (ENSOARG00020009644) HSPBAP1 (ENSOARG00020009596) ENSOARG00020009450 PARP9 (ENSOARG00020009317) KPNA1 (ENSOARG00020009195) WDR5B (ENSOARG00020009162) ENSOARG00020009132 FAM162A (ENSOARG00020009080) MIX23 (ENSOARG00020008933) CSTA (ENSOARG00020008867) ENSOARG00020008856 Bovinae ANCESTRAL SPECIES 6 ENSGT00940000155143.tb.b ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000164270.a.b Bos ANCESTRAL SPECIES 7 ENSGT00940000155143.tb.b ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01100000263481.n.a.a.b.b.b.b.b.a.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Bos_a ANCESTRAL SPECIES 5 ENSGT00390000008796 ENSGT00940000155143.tb.b ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01100000263481.n.a.a.b.b.b.b.b.a.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Wild yak MODERN SPECIES 560 ENSBMUG00000010622 ITGB5 (ENSBMUG00000010638) ENSBMUG00000010655 UMPS (ENSBMUG00000010681) KALRN (ENSBMUG00000010912) ENSBMUG00000010979 CCDC14 (ENSBMUG00000011031) ENSBMUG00000011045 ENSBMUG00000011106 ENSBMUG00000011130 ENSBMUG00000011157 HACD2 (ENSBMUG00000011173) ##22 Domestic yak MODERN SPECIES OSBPL11 (ENSBGRG00000012716) SNX4 (ENSBGRG00000012306) ENSBGRG00000012268 ENSBGRG00000012254 ZNF148 (ENSBGRG00000012130) SLC12A8 (ENSBGRG00000011908) ENSBGRG00000011820 ENSBGRG00000011657 ITGB5 (ENSBGRG00000011141) UMPS (ENSBGRG00000010943) ENSBGRG00000010879 KALRN (ENSBGRG00000009282) ENSBGRG00000009125 CCDC14 (ENSBGRG00000008926) MYLK (ENSBGRG00000008571) HACD2 (ENSBGRG00000008479) ##22 ADCY5 (ENSBGRG00000008188) SEC22A (ENSBGRG00000008128) PDIA5 (ENSBGRG00000007928) SEMA5B (ENSBGRG00000007783) ENSBGRG00000007743 SLC49A4 (ENSBGRG00000007670) HSPBAP1 (ENSBGRG00000007624) PARP14 (ENSBGRG00000007559) ENSBGRG00000007487 PARP9 (ENSBGRG00000007330) KPNA1 (ENSBGRG00000007217) WDR5B (ENSBGRG00000007190) ENSBGRG00000007133 ENSBGRG00000005048 FAM162A (ENSBGRG00000005022) Bos_b ANCESTRAL SPECIES 5 ENSGT00390000008796 ENSGT00940000155143.tb.b ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01100000263481.n.a.a.b.b.b.b.b.a.b ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Hybrid Bos Indicus MODERN SPECIES SNX4 (ENSBIXG00005009284) ENSBIXG00005000461 ENSBIXG00005009299 ZNF148 (ENSBIXG00005009332) SLC12A8 (ENSBIXG00005005942) HEG1 (ENSBIXG00005009384) ENSBIXG00005009422 ITGB5 (ENSBIXG00005009461) UMPS (ENSBIXG00005009500) ENSBIXG00005009513 KALRN (ENSBIXG00005009643) ENSBIXG00005009750 CCDC14 (ENSBIXG00005009867) ENSBIXG00005009885 MYLK (ENSBIXG00005009972) HACD2 (ENSBIXG00005010016) ##22 ADCY5 (ENSBIXG00005010133) SEC22A (ENSBIXG00005010170) PDIA5 (ENSBIXG00005010238) SEMA5B (ENSBIXG00005010297) ENSBIXG00005010319 SLC49A4 (ENSBIXG00005000849) HSPBAP1 (ENSBIXG00005010345) PARP14 (ENSBIXG00005010372) DTX3L (ENSBIXG00005000869) ENSBIXG00005010500 WDR5B (ENSBIXG00005006775) FAM162A (ENSBIXG00005010576) MIX23 (ENSBIXG00005010630) CSTA (ENSBIXG00005010645) ENSBIXG00005010673 Cow MODERN SPECIES ENSBTAG00000003383 OSBPL11 (ENSBTAG00000006471) SNX4 (ENSBTAG00000011383) ZNF148 (ENSBTAG00000050482) SLC12A8 (ENSBTAG00000000496) HEG1 (ENSBTAG00000021396) MUC13 (ENSBTAG00000010382) ITGB5 (ENSBTAG00000013755) UMPS (ENSBTAG00000013727) ENSBTAG00000053238 KALRN (ENSBTAG00000002640) ROPN1 (ENSBTAG00000006947) CCDC14 (ENSBTAG00000000566) ENSBTAG00000054441 MYLK (ENSBTAG00000014567) HACD2 (ENSBTAG00000023607) ##22 ADCY5 (ENSBTAG00000018777) SEC22A (ENSBTAG00000014797) PDIA5 (ENSBTAG00000018877) SEMA5B (ENSBTAG00000018765) SLC49A4 (ENSBTAG00000005071) HSPBAP1 (ENSBTAG00000005066) PARP14 (ENSBTAG00000016656) DTX3L (ENSBTAG00000009933) PARP9 (ENSBTAG00000021791) KPNA1 (ENSBTAG00000011143) WDR5B (ENSBTAG00000054326) FAM162A (ENSBTAG00000011140) MIX23 (ENSBTAG00000054520) CSTA (ENSBTAG00000010688) ENSBTAG00000014133 American bison MODERN SPECIES 2970 RPL35A (ENSBBBG00000007879) LMLN (ENSBBBG00000011186) ENSBBBG00000011195 OSBPL11 (ENSBBBG00000011205) SNX4 (ENSBBBG00000011216) ZNF148 (ENSBBBG00000002048) SLC12A8 (ENSBBBG00000009084) ENSBBBG00000011277 ENSBBBG00000011299 ITGB5 (ENSBBBG00000011341) UMPS (ENSBBBG00000008096) KALRN (ENSBBBG00000011507) ENSBBBG00000011546 CCDC14 (ENSBBBG00000011633) MYLK (ENSBBBG00000011706) HACD2 (ENSBBBG00000011717) ##22 ADCY5 (ENSBBBG00000011732) SEC22A (ENSBBBG00000002175) PDIA5 (ENSBBBG00000009085) SEMA5B (ENSBBBG00000011765) SLC49A4 (ENSBBBG00000011777) HSPBAP1 (ENSBBBG00000007931) PARP14 (ENSBBBG00000011832) DTX3L (ENSBBBG00000011845) PARP9 (ENSBBBG00000002214) KPNA1 (ENSBBBG00000011899) WDR5B (ENSBBBG00000011900) FAM162A (ENSBBBG00000002218) MIX23 (ENSBBBG00000011920) CSTA (ENSBBBG00000011929) ENSBBBG00000002225 Siberian musk deer MODERN SPECIES 138 OSBPL11 (ENSMMSG00000019129) ENSMMSG00000019084 SNX4 (ENSMMSG00000019042) ZNF148 (ENSMMSG00000018980) SLC12A8 (ENSMMSG00000018899) HEG1 (ENSMMSG00000018772) ENSMMSG00000018667 ITGB5 (ENSMMSG00000018600) UMPS (ENSMMSG00000018563) KALRN (ENSMMSG00000017294) ENSMMSG00000017181 ENSMMSG00000017146 CCDC14 (ENSMMSG00000017046) ENSMMSG00000017003 MYLK (ENSMMSG00000016805) HACD2 (ENSMMSG00000016733) ##22 ADCY5 (ENSMMSG00000016606) SEC22A (ENSMMSG00000016529) PDIA5 (ENSMMSG00000016449) SEMA5B (ENSMMSG00000016391) SLC49A4 (ENSMMSG00000016322) HSPBAP1 (ENSMMSG00000016268) PARP14 (ENSMMSG00000016234) DTX3L (ENSMMSG00000016186) PARP9 (ENSMMSG00000016081) KPNA1 (ENSMMSG00000016044) WDR5B (ENSMMSG00000016033) ENSMMSG00000016018 FAM162A (ENSMMSG00000015960) MIX23 (ENSMMSG00000015851) CSTA (ENSMMSG00000015826) Yarkand deer MODERN SPECIES 10 SNX4 (ENSCHYG00000017444) ENSCHYG00000017397 ZNF148 (ENSCHYG00000017256) SLC12A8 (ENSCHYG00000017089) HEG1 (ENSCHYG00000016880) ENSCHYG00000016797 ENSCHYG00000016781 ITGB5 (ENSCHYG00000016235) UMPS (ENSCHYG00000016107) ENSCHYG00000016001 KALRN (ENSCHYG00000010632) ENSCHYG00000010308 CCDC14 (ENSCHYG00000010115) MYLK (ENSCHYG00000009808) ENSCHYG00000009652 HACD2 (ENSCHYG00000009555) ##22 ADCY5 (ENSCHYG00000009354) SEC22A (ENSCHYG00000009149) PDIA5 (ENSCHYG00000008951) SEMA5B (ENSCHYG00000008664) ENSCHYG00000008624 SLC49A4 (ENSCHYG00000008571) HSPBAP1 (ENSCHYG00000008511) PARP14 (ENSCHYG00000008427) DTX3L (ENSCHYG00000008340) PARP9 (ENSCHYG00000008198) KPNA1 (ENSCHYG00000008125) WDR5B (ENSCHYG00000008111) FAM162A (ENSCHYG00000008033) MIX23 (ENSCHYG00000007933) CSTA (ENSCHYG00000007882) Camelidae ANCESTRAL SPECIES ENSGT00730000111263 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Arabian camel MODERN SPECIES LRCH3 (ENSCDRG00005020528) IQCG (ENSCDRG00005020682) RPL35A (ENSCDRG00005020695) LMLN (ENSCDRG00005020718) OSBPL11 (ENSCDRG00005020837) SNX4 (ENSCDRG00005020865) ZNF148 (ENSCDRG00005020903) SLC12A8 (ENSCDRG00005020915) HEG1 (ENSCDRG00005020932) ITGB5 (ENSCDRG00005020949) UMPS (ENSCDRG00005020963) KALRN (ENSCDRG00005020989) ENSCDRG00005021133 ENSCDRG00005006060 MYLK (ENSCDRG00005006122) HACD2 (ENSCDRG00005006227) ##22 ADCY5 (ENSCDRG00005006267) SEC22A (ENSCDRG00005006400) PDIA5 (ENSCDRG00005006477) SEMA5B (ENSCDRG00005006541) SLC49A4 (ENSCDRG00005006626) HSPBAP1 (ENSCDRG00005006680) PARP14 (ENSCDRG00005006749) DTX3L (ENSCDRG00005006821) PARP9 (ENSCDRG00005006932) KPNA1 (ENSCDRG00005006961) WDR5B (ENSCDRG00005007033) FAM162A (ENSCDRG00005007051) MIX23 (ENSCDRG00005007105) CSTA (ENSCDRG00005007175) ENSCDRG00005007199 Alpaca MODERN SPECIES 4793 HACD2 (ENSVPAG00000001472) ##22 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Carnivora ANCESTRAL SPECIES 10 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Felidae ANCESTRAL SPECIES 9 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Cat MODERN SPECIES 240 ENSFCAG00000032261 LMLN (ENSFCAG00000026594) ENSFCAG00000047412 OSBPL11 (ENSFCAG00000012556) SNX4 (ENSFCAG00000031749) ZNF148 (ENSFCAG00000026852) SLC12A8 (ENSFCAG00000031963) HEG1 (ENSFCAG00000015098) MUC13 (ENSFCAG00000015095) ITGB5 (ENSFCAG00000015093) UMPS (ENSFCAG00000006800) KALRN (ENSFCAG00000033791) ENSFCAG00000004124 CCDC14 (ENSFCAG00000022730) MYLK (ENSFCAG00000039601) HACD2 (ENSFCAG00000040650) ##22 ADCY5 (ENSFCAG00000000939) SEC22A (ENSFCAG00000031772) PDIA5 (ENSFCAG00000000938) SEMA5B (ENSFCAG00000000934) SLC49A4 (ENSFCAG00000000932) HSPBAP1 (ENSFCAG00000022353) PARP14 (ENSFCAG00000000930) PARP15 (ENSFCAG00000000929) DTX3L (ENSFCAG00000000928) PARP9 (ENSFCAG00000000557) KPNA1 (ENSFCAG00000042340) WDR5B (ENSFCAG00000005778) FAM162A (ENSFCAG00000045838) MIX23 (ENSFCAG00000025006) CSTA (ENSFCAG00000008718) Panthera ANCESTRAL SPECIES 17 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Panthera_a ANCESTRAL SPECIES 21 ENSGT00730000111263 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00900000143497 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 lion MODERN SPECIES 9 IQCG (ENSPLOG00000005816) ENSPLOG00000005859 LMLN (ENSPLOG00000006005) ENSPLOG00000006388 OSBPL11 (ENSPLOG00000006414) SNX4 (ENSPLOG00000006479) ZNF148 (ENSPLOG00000006542) SLC12A8 (ENSPLOG00000006592) HEG1 (ENSPLOG00000006671) ITGB5 (ENSPLOG00000006797) UMPS (ENSPLOG00000006973) KALRN (ENSPLOG00000007203) ENSPLOG00000007856 CCDC14 (ENSPLOG00000007912) MYLK (ENSPLOG00000008044) HACD2 (ENSPLOG00000008246) ##22 ADCY5 (ENSPLOG00000008433) SEC22A (ENSPLOG00000008711) PDIA5 (ENSPLOG00000008785) SEMA5B (ENSPLOG00000008973) SLC49A4 (ENSPLOG00000009454) HSPBAP1 (ENSPLOG00000009504) PARP14 (ENSPLOG00000009603) PARP15 (ENSPLOG00000009734) DTX3L (ENSPLOG00000009845) PARP9 (ENSPLOG00000009942) KPNA1 (ENSPLOG00000010094) WDR5B (ENSPLOG00000010123) FAM162A (ENSPLOG00000010147) MIX23 (ENSPLOG00000010210) CSTA (ENSPLOG00000010302) leopard MODERN SPECIES 15 ENSPPRG00000020369 LMLN (ENSPPRG00000023158) OSBPL11 (ENSPPRG00000022907) SNX4 (ENSPPRG00000000334) ZNF148 (ENSPPRG00000001262) SLC12A8 (ENSPPRG00000001909) HEG1 (ENSPPRG00000003493) ENSPPRG00000004040 ITGB5 (ENSPPRG00000005247) UMPS (ENSPPRG00000005595) ENSPPRG00000008378 ENSPPRG00000012519 ENSPPRG00000013266 CCDC14 (ENSPPRG00000019259) MYLK (ENSPPRG00000007685) HACD2 (ENSPPRG00000008550) ##22 ADCY5 (ENSPPRG00000012783) SEC22A (ENSPPRG00000014133) PDIA5 (ENSPPRG00000016643) SEMA5B (ENSPPRG00000001265) SLC49A4 (ENSPPRG00000002012) HSPBAP1 (ENSPPRG00000002258) PARP14 (ENSPPRG00000002799) PARP15 (ENSPPRG00000005753) DTX3L (ENSPPRG00000006373) PARP9 (ENSPPRG00000009678) KPNA1 (ENSPPRG00000010308) WDR5B (ENSPPRG00000018618) FAM162A (ENSPPRG00000011296) MIX23 (ENSPPRG00000012735) CSTA (ENSPPRG00000012891) Tiger MODERN SPECIES 584 ENSPTIG00000018882 OSBPL11 (ENSPTIG00000018896) SNX4 (ENSPTIG00000019074) ZNF148 (ENSPTIG00000019261) SLC12A8 (ENSPTIG00000019381) HEG1 (ENSPTIG00000020138) ENSPTIG00000020279 ITGB5 (ENSPTIG00000020359) ENSPTIG00000020515 UMPS (ENSPTIG00000020583) ENSPTIG00000020681 ENSPTIG00000021197 ENSPTIG00000021492 CCDC14 (ENSPTIG00000021554) MYLK (ENSPTIG00000002068) HACD2 (ENSPTIG00000007838) ##22 ADCY5 (ENSPTIG00000007994) SEC22A (ENSPTIG00000008603) PDIA5 (ENSPTIG00000008960) SEMA5B (ENSPTIG00000009253) SLC49A4 (ENSPTIG00000010895) HSPBAP1 (ENSPTIG00000011012) PARP14 (ENSPTIG00000011462) PARP15 (ENSPTIG00000011576) DTX3L (ENSPTIG00000012095) PARP9 (ENSPTIG00000012502) KPNA1 (ENSPTIG00000013177) WDR5B (ENSPTIG00000009752) FAM162A (ENSPTIG00000013653) MIX23 (ENSPTIG00000013929) CSTA (ENSPTIG00000014105) Caniformia ANCESTRAL SPECIES ENSGT00390000016972.a.a.a.n.b ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a.m ENSGT00390000011053 ENSGT00940000155717 Canidae ANCESTRAL SPECIES 35 ENSGT00390000016972.a.a.a.n.b ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT00900000143497 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a.m ENSGT00390000011053 ENSGT00940000155717 Canis_lupus ANCESTRAL SPECIES 31 ENSGT00390000016972.a.a.a.n.b ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a.m ENSGT00390000011053 ENSGT00940000155717 Dingo MODERN SPECIES 65 IQCG (ENSCAFG00020003353) RPL35A (ENSCAFG00020003355) LMLN (ENSCAFG00020003363) SNX4 (ENSCAFG00020003451) ZNF148 (ENSCAFG00020003457) ENSCAFG00020003525 ENSCAFG00020003535 ITGB5 (ENSCAFG00020003635) ENSCAFG00020004552 UMPS (ENSCAFG00020004557) KALRN (ENSCAFG00020004567) ENSCAFG00020004598 CCDC14 (ENSCAFG00020004615) ENSCAFG00020004628 ENSCAFG00020004677 HACD2 (ENSCAFG00020004769) ##22 ADCY5 (ENSCAFG00020004785) SEC22A (ENSCAFG00020005254) PDIA5 (ENSCAFG00020005280) ENSCAFG00020005283 SEMA5B (ENSCAFG00020005290) SLC49A4 (ENSCAFG00020005463) HSPBAP1 (ENSCAFG00020005468) PARP14 (ENSCAFG00020005495) PARP15 (ENSCAFG00020005735) DTX3L (ENSCAFG00020005740) PARP9 (ENSCAFG00020005744) KPNA1 (ENSCAFG00020005751) WDR5B (ENSCAFG00020005756) FAM162A (ENSCAFG00020005763) MIX23 (ENSCAFG00020005773) Dog MODERN SPECIES 26 RPL35A (ENSCAFG00845028539) ENSCAFG00845028330 ENSCAFG00845028148 SNX4 (ENSCAFG00845028061) ZNF148 (ENSCAFG00845027952) SLC12A8 (ENSCAFG00845027740) HEG1 (ENSCAFG00845027629) ENSCAFG00845027233 ENSCAFG00845027037 ITGB5 (ENSCAFG00845026987) UMPS (ENSCAFG00845026912) KALRN (ENSCAFG00845026150) ROPN1 (ENSCAFG00845025966) CCDC14 (ENSCAFG00845025697) MYLK (ENSCAFG00845024910) HACD2 (ENSCAFG00845024710) ##22 ADCY5 (ENSCAFG00845024171) ENSCAFG00845025748 SEC22A (ENSCAFG00845025544) PDIA5 (ENSCAFG00845025434) SEMA5B (ENSCAFG00845024985) SLC49A4 (ENSCAFG00845024853) HSPBAP1 (ENSCAFG00845024709) PARP14 (ENSCAFG00845024440) PARP15 (ENSCAFG00845024135) DTX3L (ENSCAFG00845023939) PARP9 (ENSCAFG00845023649) WDR5B (ENSCAFG00845023565) KPNA1 (ENSCAFG00845023382) FAM162A (ENSCAFG00845023253) CCDC58 (ENSCAFG00845023125) Red fox MODERN SPECIES 6 ENSVVUG00000007413 OSBPL11 (ENSVVUG00000007401) SNX4 (ENSVVUG00000007353) ZNF148 (ENSVVUG00000007287) SLC12A8 (ENSVVUG00000007273) HEG1 (ENSVVUG00000007247) ENSVVUG00000007213 ENSVVUG00000007197 ITGB5 (ENSVVUG00000004688) UMPS (ENSVVUG00000004616) ENSVVUG00000004468 KALRN (ENSVVUG00000004441) ENSVVUG00000004417 CCDC14 (ENSVVUG00000004392) MYLK (ENSVVUG00000004229) HACD2 (ENSVVUG00000004161) ##22 ADCY5 (ENSVVUG00000000595) SEC22A (ENSVVUG00000000169) PDIA5 (ENSVVUG00000000124) SEMA5B (ENSVVUG00000022570) SLC49A4 (ENSVVUG00000022550) HSPBAP1 (ENSVVUG00000022538) PARP14 (ENSVVUG00000022533) PARP15 (ENSVVUG00000022532) DTX3L (ENSVVUG00000022529) PARP9 (ENSVVUG00000022523) KPNA1 (ENSVVUG00000022509) FAM162A (ENSVVUG00000022501) MIX23 (ENSVVUG00000022499) CSTA (ENSVVUG00000022498) CASR (ENSVVUG00000022486) Caniformia_b ANCESTRAL SPECIES ENSGT00390000016972.a.a.a.n.b ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a.m ENSGT00390000011053 ENSGT00940000155717 Mustelinae ANCESTRAL SPECIES 20 ENSGT00390000016972.a.a.a.n.b ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a.m ENSGT00390000011053 ENSGT00940000155717 American mink MODERN SPECIES 159 ENSNVIG00000012456 LMLN (ENSNVIG00000012494) OSBPL11 (ENSNVIG00000012608) SNX4 (ENSNVIG00000012621) ZNF148 (ENSNVIG00000012644) SLC12A8 (ENSNVIG00000012695) HEG1 (ENSNVIG00000012751) ENSNVIG00000012793 ITGB5 (ENSNVIG00000012802) ENSNVIG00000012834 UMPS (ENSNVIG00000012841) KALRN (ENSNVIG00000012868) ENSNVIG00000013136 CCDC14 (ENSNVIG00000013208) MYLK (ENSNVIG00000013377) HACD2 (ENSNVIG00000013766) ##22 ADCY5 (ENSNVIG00000013790) SC22A (ENSNVIG00000013865) PDIA5 (ENSNVIG00000013896) SEMA5B (ENSNVIG00000013926) SLC49A4 (ENSNVIG00000014011) HSPBAP1 (ENSNVIG00000014027) PARP14 (ENSNVIG00000014053) PARP15 (ENSNVIG00000014076) DTX3L (ENSNVIG00000014145) PARP9 (ENSNVIG00000014174) KPNA1 (ENSNVIG00000014266) WDR5B (ENSNVIG00000014350) FAM162A (ENSNVIG00000014358) MIX23 (ENSNVIG00000014412) CYTA (ENSNVIG00000014470) Ferret MODERN SPECIES 176 ENSMPUG00000004138 OSBPL11 (ENSMPUG00000004142) SNX4 (ENSMPUG00000004151) ZNF148 (ENSMPUG00000004162) SLC12A8 (ENSMPUG00000004175) HEG1 (ENSMPUG00000004187) ENSMPUG00000004241 ENSMPUG00000004245 ITGB5 (ENSMPUG00000004287) UMPS (ENSMPUG00000004294) KALRN (ENSMPUG00000004314) ENSMPUG00000004347 CCDC14 (ENSMPUG00000004354) MYLK (ENSMPUG00000004362) ENSMPUG00000004493 HACD2 (ENSMPUG00000004497) ##22 ADCY5 (ENSMPUG00000004506) SEC22A (ENSMPUG00000004528) PDIA5 (ENSMPUG00000004581) SEMA5B (ENSMPUG00000004590) SLC49A4 (ENSMPUG00000004605) HSPBAP1 (ENSMPUG00000004617) PARP14 (ENSMPUG00000004629) PARP15 (ENSMPUG00000004730) DTX3L (ENSMPUG00000004741) PARP9 (ENSMPUG00000004750) KPNA1 (ENSMPUG00000004757) FAM162A (ENSMPUG00000004773) WDR5B (ENSMPUG00000018896) MIX23 (ENSMPUG00000004777) CSTA (ENSMPUG00000004783) Ursidae ANCESTRAL SPECIES 1 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A.f ENSGT00940000154419.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT01090000259987.b.b.a.b ENSGT00950000186204 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a.m ENSGT00390000011053 ENSGT00940000155717 Giant Panda MODERN SPECIES ENSAMEG00000004187 ENSAMEG00000004217 SNX4 (ENSAMEG00000004231) ZNF148 (ENSAMEG00000004258) SLC12A8 (ENSAMEG00000004287) HEG1 (ENSAMEG00000004314) ENSAMEG00000004328 ENSAMEG00000023617 ITGB5 (ENSAMEG00000004337) ENSAMEG00000030849 ENSAMEG00000027365 KALRN (ENSAMEG00000008230) ENSAMEG00000008011 CCDC14 (ENSAMEG00000006144) MYLK (ENSAMEG00000004641) HACD2 (ENSAMEG00000004690) ##22 ADCY5 (ENSAMEG00000004694) ENSAMEG00000004762 SEMA5B (ENSAMEG00000004803) SLC49A4 (ENSAMEG00000004838) HSPBAP1 (ENSAMEG00000004855) PARP14 (ENSAMEG00000004862) ENSAMEG00000004886 DTX3L (ENSAMEG00000014401) PARP9 (ENSAMEG00000014386) ENSAMEG00000026146 WDR5B (ENSAMEG00000019768) FAM162A (ENSAMEG00000014316) MIX23 (ENSAMEG00000014299) ENSAMEG00000014297 CASR (ENSAMEG00000014276) Ursus ANCESTRAL SPECIES 44 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A.f ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155248 ENSGT00950000186204 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a.m ENSGT00390000011053 ENSGT00940000155717 Polar bear MODERN SPECIES 313 OSBPL11 (ENSUMAG00000025135) SNX4 (ENSUMAG00000025136) ZNF148 (ENSUMAG00000025176) SLC12A8 (ENSUMAG00000025177) ENSUMAG00000025182 ENSUMAG00000025183 ITGB5 (ENSUMAG00000025185) ENSUMAG00000025186 UMPS (ENSUMAG00000025187) ENSUMAG00000025188 ENSUMAG00000025189 ENSUMAG00000025190 ENSUMAG00000025192 CCDC14 (ENSUMAG00000025193) MYLK (ENSUMAG00000025194) HACD2 (ENSUMAG00000025202) ##22 ADCY5 (ENSUMAG00000025209) SEC22A (ENSUMAG00000025211) PDIA5 (ENSUMAG00000025212) SLC49A4 (ENSUMAG00000025214) HSPBAP1 (ENSUMAG00000025215) PARP14 (ENSUMAG00000025217) ENSUMAG00000025218 DTX3L (ENSUMAG00000025219) PARP9 (ENSUMAG00000025220) KPNA1 (ENSUMAG00000025221) WDR5B (ENSUMAG00000025222) ENSUMAG00000025223 MIX23 (ENSUMAG00000025224) ENSUMAG00000025225 CASR (ENSUMAG00000025226) American black bear MODERN SPECIES 6114 ENSUAMG00000016420 ##22 Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Equus ANCESTRAL SPECIES 19 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00900000143497 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 Donkey MODERN SPECIES 25 ENSEASG00005006834 SNX4 (ENSEASG00005006841) ZNF148 (ENSEASG00005006857) SLC12A8 (ENSEASG00005006860) ENSEASG00005006869 ENSEASG00005006873 ITGB5 (ENSEASG00005006879) ENSEASG00005024271 UMPS (ENSEASG00005006882) ENSEASG00005006896 ENSEASG00005000860 ENSEASG00005006982 ENSEASG00005007063 CCDC14 (ENSEASG00005007069) MYLK (ENSEASG00005017131) HACD2 (ENSEASG00005017124) ##22 ADCY5 (ENSEASG00005016931) SEC22A (ENSEASG00005016902) PDIA5 (ENSEASG00005016898) SEMA5B (ENSEASG00005016611) SLC49A4 (ENSEASG00005016562) HSPBAP1 (ENSEASG00005016558) PARP14 (ENSEASG00005016553) PARP15 (ENSEASG00005034894) ENSEASG00005032663 ENSEASG00005026341 DTX3L (ENSEASG00005016541) PARP9 (ENSEASG00005016538) KPNA1 (ENSEASG00005015533) MIX23 (ENSEASG00005015468) FAM162A (ENSEASG00005015469) Horse MODERN SPECIES 10 LMLN (ENSECAG00000012354) OSBPL11 (ENSECAG00000020840) SNX4 (ENSECAG00000008857) ZNF148 (ENSECAG00000013557) SLC12A8 (ENSECAG00000020175) HEG1 (ENSECAG00000001870) ENSECAG00000006569 ITGB5 (ENSECAG00000007589) ENSECAG00000049764 UMPS (ENSECAG00000009708) ENSECAG00000049298 KALRN (ENSECAG00000019993) ENSECAG00000012007 CCDC14 (ENSECAG00000014591) MYLK (ENSECAG00000015387) HACD2 (ENSECAG00000053414) ##22 ADCY5 (ENSECAG00000009948) SEC22A (ENSECAG00000011130) PDIA5 (ENSECAG00000015276) SEMA5B (ENSECAG00000008520) SLC49A4 (ENSECAG00000021542) HSPBAP1 (ENSECAG00000024770) PARP14 (ENSECAG00000024988) PARP15 (ENSECAG00000008906) ENSECAG00000046950 DTX3L (ENSECAG00000009686) PARP9 (ENSECAG00000012331) ENSECAG00000053139 ENSECAG00000059947 KPNA1 (ENSECAG00000017694) MIX23 (ENSECAG00000023743) Chiroptera ANCESTRAL SPECIES 13 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT00900000143497 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717.f Megabat MODERN SPECIES 2357 MYLK (ENSPVAG00000017855) HACD2 (ENSPVAG00000017854) ##22 ADCY5 (ENSPVAG00000017852) Microchiroptera ANCESTRAL SPECIES 11 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT00900000143497 ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000163672 ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717.f Greater horseshoe bat MODERN SPECIES 11 OSBPL11 (ENSRFEG00010011920) SNX4 (ENSRFEG00010011851) ZNF148 (ENSRFEG00010011798) ENSRFEG00010011777 SLC12A8 (ENSRFEG00010011701) HEG1 (ENSRFEG00010011400) ENSRFEG00010011352 ENSRFEG00010011276 ITGB5 (ENSRFEG00010011225) UMPS (ENSRFEG00010011171) KALRN (ENSRFEG00010010836) ENSRFEG00010010633 ENSRFEG00010010577 CCDC14 (ENSRFEG00010010337) MYLK (ENSRFEG00010010116) HACD2 (ENSRFEG00010004173) ##22 ADCY5 (ENSRFEG00010004062) SEC22A (ENSRFEG00010003993) PDIA5 (ENSRFEG00010003958) SEMA5B (ENSRFEG00010003898) SLC49A4 (ENSRFEG00010003866) HSPBAP1 (ENSRFEG00010003847) PARP14 (ENSRFEG00010003792) ENSRFEG00010003770 PARP15 (ENSRFEG00010003726) DTX3L (ENSRFEG00010003606) PARP9 (ENSRFEG00010003581) KPNA1 (ENSRFEG00010003555) WDR5B (ENSRFEG00010003535) FAM162A (ENSRFEG00010003513) ENSRFEG00010003469 Microbat MODERN SPECIES 1042 RPL35A (ENSMLUG00000010771) LMLN (ENSMLUG00000010788) ENSMLUG00000027927 OSBPL11 (ENSMLUG00000005512) SNX4 (ENSMLUG00000026891) ZNF148 (ENSMLUG00000007681) SLC12A8 (ENSMLUG00000024105) HEG1 (ENSMLUG00000001184) ENSMLUG00000001172 ITGB5 (ENSMLUG00000002372) UMPS (ENSMLUG00000002366) KALRN (ENSMLUG00000002329) ENSMLUG00000014232 CCDC14 (ENSMLUG00000004746) MYLK (ENSMLUG00000011967) HACD2 (ENSMLUG00000011954) ##22 ENSMLUG00000006448 ADCY5 (ENSMLUG00000008225) SEC22A (ENSMLUG00000008207) PDIA5 (ENSMLUG00000008176) SEMA5B (ENSMLUG00000008130) SLC49A4 (ENSMLUG00000008102) ENSMLUG00000008081 ENSMLUG00000024845 ENSMLUG00000027718 ENSMLUG00000023256 ENSMLUG00000022755 Eulipotyphla ANCESTRAL SPECIES ENSGT00530000062962.a.a ##22 Hedgehog MODERN SPECIES 8679 HACD2 (ENSEEUG00000014414) ##22 Common shrew MODERN SPECIES 6851 ENSSARG00000009711 ##22 Atlantogenata ANCESTRAL SPECIES 19 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Xenarthra ANCESTRAL SPECIES 16 ENSGT00730000111263 ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00950000183570 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 Sloth MODERN SPECIES 7653 HACD2 (ENSCHOG00000001098) ##22 Armadillo MODERN SPECIES 2286 LMLN (ENSDNOG00000045591) OSBPL11 (ENSDNOG00000024690) SNX4 (ENSDNOG00000011073) ZNF148 (ENSDNOG00000000280) SLC12A8 (ENSDNOG00000024925) HEG1 (ENSDNOG00000010820) ENSDNOG00000034032 ITGB5 (ENSDNOG00000035121) UMPS (ENSDNOG00000016932) KALRN (ENSDNOG00000016920) ENSDNOG00000032673 ENSDNOG00000000871 CCDC14 (ENSDNOG00000000957) ENSDNOG00000044271 ENSDNOG00000045381 HACD2 (ENSDNOG00000033819) ##22 ADCY5 (ENSDNOG00000009964) SEC22A (ENSDNOG00000037541) PDIA5 (ENSDNOG00000013909) Afrotheria ANCESTRAL SPECIES 17 ENSGT00730000111263 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Tenrec MODERN SPECIES 8617 HACD2 (ENSETEG00000013547) ##22 Afrotheria_a ANCESTRAL SPECIES 16 ENSGT00730000111263 ENSGT00390000016972.a.a.a ENSGT00390000008796 ENSGT00940000158398 ENSGT00930000151029 ENSGT00940000157406 ENSGT00940000160130 ENSGT00710000106813.A ENSGT00940000154419.b ENSGT01090000259987.b.b.a.b ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00530000062962.a.a ##22 ENSGT00940000158054 ENSGT00940000158470 ENSGT00940000156797 ENSGT00940000156712 ENSGT01030000234625.D ENSGT00940000159893 ENSGT00940000154311.a.b ENSGT00940000154578.A.d ENSGT00940000158837 ENSGT01050000244950.a.a.a ENSGT00940000154143.f ENSGT00640000091497.a ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000157596 Hyrax MODERN SPECIES 7209 HACD2 (ENSPCAG00000002041) ##22 Elephant MODERN SPECIES 261 LMLN (ENSLAFG00000007857) OSBPL11 (ENSLAFG00000023046) SNX4 (ENSLAFG00000007423) ZNF148 (ENSLAFG00000016025) SLC12A8 (ENSLAFG00000022977) ENSLAFG00000002395 ENSLAFG00000001737 ITGB5 (ENSLAFG00000001735) UMPS (ENSLAFG00000005146) KALRN (ENSLAFG00000001729) ENSLAFG00000027237 ENSLAFG00000000950 ENSLAFG00000014352 ENSLAFG00000030467 MYLK (ENSLAFG00000013157) HACD2 (ENSLAFG00000002952) ##22 ADCY5 (ENSLAFG00000001469) SEC22A (ENSLAFG00000001467) PDIA5 (ENSLAFG00000013629) SEMA5B (ENSLAFG00000001249) SLC49A4 (ENSLAFG00000000371) ENSLAFG00000026158 HSPBAP1 (ENSLAFG00000002885) PARP14 (ENSLAFG00000021607) ENSLAFG00000028871 ENSLAFG00000017413 PARP9 (ENSLAFG00000017406) KPNA1 (ENSLAFG00000002804) WDR5B (ENSLAFG00000016063) FAM162A (ENSLAFG00000016057) MIX23 (ENSLAFG00000016049) Elephant shark MODERN SPECIES 2477 hacd2 (ENSCMIG00000000224) ##22 Gnathostomata ANCESTRAL SPECIES 18 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00390000006960 ENSGT00940000170561 ENSGT00390000008042.A.a.b ENSGT00390000008042.A.a.a ENSGT00390000014274 ENSGT00390000015769.A ENSGT00940000155589 ENSGT00940000156889 ENSGT00530000063909.b ENSGT00940000160249 Euteleostomi ANCESTRAL SPECIES 2 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000170561 ENSGT00390000008042.A.a.b ENSGT00390000008042.A.a.a ENSGT00390000014274 ENSGT00390000015769.A ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 Sarcopterygii ANCESTRAL SPECIES ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000170561 ENSGT00390000008042.A.a.b ENSGT00390000008042.A.a.a ENSGT00390000014274 ENSGT00390000015769.A ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 Tetrapoda ANCESTRAL SPECIES 7 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000170561 ENSGT00390000008042.A.a.b ENSGT00390000008042.A.a.a ENSGT00390000014274 ENSGT00390000015769.A ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 Amniota ANCESTRAL SPECIES 7 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Sauria ANCESTRAL SPECIES 15 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Lepidosauria ANCESTRAL SPECIES 5 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT01060000248556.C Episquamata ANCESTRAL SPECIES 5 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT01060000248556.C Toxicofera ANCESTRAL SPECIES 4 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000154775.c.b ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639.b ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT01060000248556.C Elapidae ANCESTRAL SPECIES 5 ENSGT00390000015971.c ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT01100000263568.a ENSGT01050000244842.a.a.a.a.b.c.a ENSGT00960000190705 ENSGT01050000244842.a.a.a.a.b.c.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639.b ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b.l ENSGT00390000007526 ENSGT00940000161184 ENSGT01060000248556.C Indian cobra MODERN SPECIES 337 ENSNNAG00000011266 DNAJC1 (ENSNNAG00000011251) MLLT10 (ENSNNAG00000011164) NEBL (ENSNNAG00000010937) ENSNNAG00000010904 PLXDC2 (ENSNNAG00000010837) ARL5B (ENSNNAG00000010793) NSUN6 (ENSNNAG00000010767) CACNB2 (ENSNNAG00000010364) ENSNNAG00000010302 ENSNNAG00000010266 ENSNNAG00000010097 ENSNNAG00000009968 ENSNNAG00000009846 STAM (ENSNNAG00000009800) HACD1 (ENSNNAG00000009753) ##22 ST8SIA6 (ENSNNAG00000009700) VIM (ENSNNAG00000009657) TRDMT1 (ENSNNAG00000009613) RSU1 (ENSNNAG00000009516) C1QL3 (ENSNNAG00000009497) PTER (ENSNNAG00000009484) ENSNNAG00000009405 ENSNNAG00000009378 ITGA8 (ENSNNAG00000009107) FAM171A1 (ENSNNAG00000009047) ENSNNAG00000009028 RPP38 (ENSNNAG00000009005) ACBD7 (ENSNNAG00000008977) CROT (ENSNNAG00000008845) ABCB4 (ENSNNAG00000008726) Elapidae_a ANCESTRAL SPECIES 89 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT01050000244842.a.a.a.a.b.c.a ENSGT00960000190705 ENSGT01050000244842.a.a.a.a.b.c.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639.b ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b.l ENSGT00390000007526 ENSGT00940000161184 ENSGT01060000248556.C Acanthophiinae ANCESTRAL SPECIES 84 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT01050000244842.a.a.a.a.b.c.a ENSGT00960000190705 ENSGT01050000244842.a.a.a.a.b.c.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639.b ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b.l ENSGT00390000007526 ENSGT00940000161184 ENSGT01060000248556.C Mainland tiger snake MODERN SPECIES 281 STAM (ENSNSUG00000008672) ENSNSUG00000008733 HACD1 (ENSNSUG00000008734) ##22 ST8SIA6 (ENSNSUG00000008735) VIM (ENSNSUG00000008736) TRDMT1 (ENSNSUG00000008737) ENSNSUG00000008738 ENSNSUG00000008739 RSU1 (ENSNSUG00000008740) Eastern brown snake MODERN SPECIES 83 ARL5B (ENSPTXG00000018400) NSUN6 (ENSPTXG00000018399) CACNB2 (ENSPTXG00000018348) ENSPTXG00000018347 ENSPTXG00000018346 ENSPTXG00000018345 ENSPTXG00000018338 STAM (ENSPTXG00000018334) HACD1 (ENSPTXG00000018332) ##22 ST8SIA6 (ENSPTXG00000018331) VIM (ENSPTXG00000018329) TRDMT1 (ENSPTXG00000018327) RSU1 (ENSPTXG00000018325) C1QL3 (ENSPTXG00000018324) PTER (ENSPTXG00000018323) MINDY3 (ENSPTXG00000018322) ITGA8 (ENSPTXG00000018320) FAM171A1 (ENSPTXG00000018315) ENSPTXG00000018312 RPP38 (ENSPTXG00000018310) ACBD7 (ENSPTXG00000018307) CROT (ENSPTXG00000018303) ABCB4 (ENSPTXG00000012399) RUNDC3B (ENSPTXG00000012346) Blue-lipped sea krait MODERN SPECIES 8026 HACD1 (ENSLLTG00000012322) ##22 Lizard MODERN SPECIES 5 MLLT10 (ENSACAG00000009100) ENSACAG00000043910 SKIDA1 (ENSACAG00000009219) NEBL (ENSACAG00000009235) PLXDC2 (ENSACAG00000009328) MALRD1 (ENSACAG00000009390) ENSACAG00000038966 ARL5B (ENSACAG00000036450) NSUN6 (ENSACAG00000005626) CACNB2 (ENSACAG00000005593) SLC39A12 (ENSACAG00000005499) ENSACAG00000026180 ENSACAG00000038365 ENSACAG00000005361 STAM (ENSACAG00000005258) HACD1 (ENSACAG00000036579) ##22 ST8SIA6 (ENSACAG00000005223) VIM (ENSACAG00000005142) ENSACAG00000039664 TRDMT1 (ENSACAG00000005072) ENSACAG00000044633 ENSACAG00000043877 ENSACAG00000038605 ENSACAG00000039702 RSU1 (ENSACAG00000016689) C1QL3 (ENSACAG00000016680) PTER (ENSACAG00000016661) MINDY3 (ENSACAG00000016625) ITGA8 (ENSACAG00000016491) FAM171A1 (ENSACAG00000016457) ENSACAG00000041057 Laterata ANCESTRAL SPECIES 10 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT00960000190705 ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT01060000248556.C ENSGT00940000159418 Common wall lizard MODERN SPECIES 3 ENSPMRG00000014323 PLXDC2 (ENSPMRG00000014334) MALRD1 (ENSPMRG00000014401) ARL5B (ENSPMRG00000014501) NSUN6 (ENSPMRG00000014502) CACNB2 (ENSPMRG00000014524) ENSPMRG00000014548 ENSPMRG00000014572 ENSPMRG00000014674 ENSPMRG00000014737 ENSPMRG00000014750 ENSPMRG00000014810 ENSPMRG00000014995 STAM (ENSPMRG00000015076) ENSPMRG00000010940 HACD1 (ENSPMRG00000010942) ##22 ST8SIA6 (ENSPMRG00000010952) ENSPMRG00000010961 CUBN (ENSPMRG00000011006) RSU1 (ENSPMRG00000011037) ENSPMRG00000011042 C1QL3 (ENSPMRG00000011046) PTER (ENSPMRG00000011053) MINDY3 (ENSPMRG00000011062) ITGA8 (ENSPMRG00000011117) FAM171A1 (ENSPMRG00000011229) NMT2 (ENSPMRG00000011258) ENSPMRG00000011266 ENSPMRG00000011272 CROT (ENSPMRG00000011280) ABCB4 (ENSPMRG00000011295) Argentine black and white tegu MODERN SPECIES 5 BMI1 (ENSSMRG00000014069) COMMD3 (ENSSMRG00000014068) DNAJC1 (ENSSMRG00000014067) MLLT10 (ENSSMRG00000014066) NEBL (ENSSMRG00000014064) ENSSMRG00000014062 PLXDC2 (ENSSMRG00000014060) MALRD1 (ENSSMRG00000014059) ARL5B (ENSSMRG00000014058) NSUN6 (ENSSMRG00000014057) CACNB2 (ENSSMRG00000014055) SLC39A12 (ENSSMRG00000014054) ENSSMRG00000014047 ENSSMRG00000014043 STAM (ENSSMRG00000014040) HACD1 (ENSSMRG00000014038) ##22 ST8SIA6 (ENSSMRG00000014035) VIM (ENSSMRG00000014032) TRDMT1 (ENSSMRG00000014030) CUBN (ENSSMRG00000013903) RSU1 (ENSSMRG00000013895) C1QL3 (ENSSMRG00000013894) PTER (ENSSMRG00000013893) ENSSMRG00000013892 MINDY3 (ENSSMRG00000013891) ITGA8 (ENSSMRG00000013890) FAM171A1 (ENSSMRG00000013887) NMT2 (ENSSMRG00000013886) RPP38 (ENSSMRG00000013885) ACBD7 (ENSSMRG00000013884) CROT (ENSSMRG00000013883) tuatara MODERN SPECIES 1146 SLC39A12 (ENSSPUG00000006430) ENSSPUG00000006411 ENSSPUG00000006400 ENSSPUG00000006391 ENSSPUG00000006352 ENSSPUG00000006330 ENSSPUG00000006261 STAM (ENSSPUG00000006250) HACD1 (ENSSPUG00000006201) ##22 ST8SIA6 (ENSSPUG00000006179) VIM (ENSSPUG00000006149) TRDMT1 (ENSSPUG00000006123) CUBN (ENSSPUG00000005996) RSU1 (ENSSPUG00000005929) C1QL3 (ENSSPUG00000005911) PTER (ENSSPUG00000005903) MINDY3 (ENSSPUG00000005871) ITGA8 (ENSSPUG00000005812) Archelosauria ANCESTRAL SPECIES 6 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT01060000248556.C Cryptodira ANCESTRAL SPECIES 4 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT01060000248556.C Chinese turtle MODERN SPECIES 780 ENSPSIG00000016375 ENSPSIG00000015042 NSUN6 (ENSPSIG00000014756) ARL5B (ENSPSIG00000014201) CACNB2 (ENSPSIG00000013741) SLC39A12 (ENSPSIG00000013515) ENSPSIG00000012299 ENSPSIG00000012204 ENSPSIG00000012168 ENSPSIG00000012151 ENSPSIG00000001542 ENSPSIG00000009807 ENSPSIG00000017590 STAM (ENSPSIG00000017292) ENSPSIG00000001538 HACD1 (ENSPSIG00000017287) ##22 ST8SIA6 (ENSPSIG00000017195) VIM (ENSPSIG00000016677) ENSPSIG00000016671 ENSPSIG00000016645 CUBN (ENSPSIG00000012750) RSU1 (ENSPSIG00000012586) ENSPSIG00000001531 PTER (ENSPSIG00000012574) MINDY3 (ENSPSIG00000012514) ITGA8 (ENSPSIG00000010694) FAM171A1 (ENSPSIG00000010577) NMT2 (ENSPSIG00000009935) RPP38 (ENSPSIG00000001527) ACBD7 (ENSPSIG00000009875) CROT (ENSPSIG00000008518) Testudinoidea ANCESTRAL SPECIES 8 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT01060000248556.C Emydidae ANCESTRAL SPECIES 35 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 painted turtle MODERN SPECIES 2396 NEBL (ENSCPBG00000015130) PLXDC2 (ENSCPBG00000015081) ENSCPBG00000015073 MALRD1 (ENSCPBG00000015068) ARL5B (ENSCPBG00000015064) NSUN6 (ENSCPBG00000015063) CACNB2 (ENSCPBG00000015061) ENSCPBG00000015060 SLC39A12 (ENSCPBG00000015056) ENSCPBG00000015055 ENSCPBG00000015054 ENSCPBG00000015049 ENSCPBG00000015045 ENSCPBG00000015041 STAM (ENSCPBG00000015036) HACD1 (ENSCPBG00000015032) ##22 ENSCPBG00000015023 Three-toed box turtle MODERN SPECIES 30 ENSTMTG00000004598 NEBL (ENSTMTG00000004526) ENSTMTG00000004504 PLXDC2 (ENSTMTG00000004471) MALRD1 (ENSTMTG00000004196) ARL5B (ENSTMTG00000004147) NSUN6 (ENSTMTG00000004117) CACNB2 (ENSTMTG00000003632) SLC39A12 (ENSTMTG00000003448) ENSTMTG00000002459 ENSTMTG00000002294 ENSTMTG00000001586 ENSTMTG00000001367 STAM (ENSTMTG00000001341) ENSTMTG00000001330 HACD1 (ENSTMTG00000001322) ##22 ST8SIA6 (ENSTMTG00000001310) VIM (ENSTMTG00000001293) TRDMT1 (ENSTMTG00000001280) CUBN (ENSTMTG00000001212) RSU1 (ENSTMTG00000001180) C1QL3 (ENSTMTG00000001167) PTER (ENSTMTG00000001157) MINDY3 (ENSTMTG00000001129) ITGA8 (ENSTMTG00000000794) FAM171A1 (ENSTMTG00000000729) NMT2 (ENSTMTG00000000711) RPP38 (ENSTMTG00000000700) OLAH (ENSTMTG00000000677) ACBD7 (ENSTMTG00000000654) CROT (ENSTMTG00000000621) Testudinidae ANCESTRAL SPECIES 1 ENSGT00940000154775.c.b ENSGT00960000191779 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT01060000248556.C Abingdon island giant tortoise MODERN SPECIES 1786 HACD1 (ENSCABG00000007285) ##22 ST8SIA6 (ENSCABG00000007287) VIM (ENSCABG00000007291) ENSCABG00000007294 Goode s thornscrub tortoise MODERN SPECIES 11 SKIDA1 (ENSGEVG00005006494) ENSGEVG00005006507 NEBL (ENSGEVG00005006560) ENSGEVG00005006626 PLXDC2 (ENSGEVG00005006700) MALRD1 (ENSGEVG00005007214) ARL5B (ENSGEVG00005007509) NSUN6 (ENSGEVG00005007531) CACNB2 (ENSGEVG00005007602) SLC39A12 (ENSGEVG00005008053) ENSGEVG00005008252 ENSGEVG00005008640 ENSGEVG00005008762 ENSGEVG00005010030 STAM (ENSGEVG00005011756) HACD1 (ENSGEVG00005011862) ##22 ST8SIA6 (ENSGEVG00005012103) VIM (ENSGEVG00005012129) TRDMT1 (ENSGEVG00005012151) CUBN (ENSGEVG00005012239) RSU1 (ENSGEVG00005012763) C1QL3 (ENSGEVG00005012789) PTER (ENSGEVG00005012820) ENSGEVG00005012837 MINDY3 (ENSGEVG00005012873) ITGA8 (ENSGEVG00005012928) FAM171A1 (ENSGEVG00005013207) NMT2 (ENSGEVG00005013289) RPP38 (ENSGEVG00005013315) ACBD7 (ENSGEVG00005013364) OLAH (ENSGEVG00005013406) Archosauria ANCESTRAL SPECIES ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT01060000248556.C Aves ANCESTRAL SPECIES 5 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT01060000248556.C Neognathae ANCESTRAL SPECIES ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00960000189558 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Neognathae_b ANCESTRAL SPECIES 9 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00960000189558 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Neognathae_c ANCESTRAL SPECIES 12 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00960000189558 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Golden eagle MODERN SPECIES 19 ENSACCG00020006762 ENSACCG00020006747 ENSACCG00020006736 PLXDC2 (ENSACCG00020006716) MALRD1 (ENSACCG00020006693) ARL5B (ENSACCG00020006664) NSUN6 (ENSACCG00020006650) CACNB2 (ENSACCG00020006589) SLC39A12 (ENSACCG00020006562) ENSACCG00020006326 ENSACCG00020006091 ENSACCG00020005733 ENSACCG00020004885 ENSACCG00020004404 STAM (ENSACCG00020004394) HACD1 (ENSACCG00020004382) ##22 ST8SIA6 (ENSACCG00020004374) VIM (ENSACCG00020004367) TRDMT1 (ENSACCG00020004356) CUBN (ENSACCG00020004326) RSU1 (ENSACCG00020004277) C1QL3 (ENSACCG00020004254) PTER (ENSACCG00020004245) MINDY3 (ENSACCG00020004221) ITGA8 (ENSACCG00020004159) FAM171A1 (ENSACCG00020004086) NMT2 (ENSACCG00020004076) ENSACCG00020004061 ACBD7 (ENSACCG00020004051) CROT (ENSACCG00020004030) ENSACCG00020004019 Kakapo MODERN SPECIES MLLT10 (ENSSHBG00005002414) ENSSHBG00005002450 NEBL (ENSSHBG00005002467) PLXDC2 (ENSSHBG00005002557) MALRD1 (ENSSHBG00005002728) ARL5B (ENSSHBG00005002783) NSUN6 (ENSSHBG00005002800) CACNB2 (ENSSHBG00005003004) SLC39A12 (ENSSHBG00005003597) ENSSHBG00005003652 ENSSHBG00005003698 ENSSHBG00005003733 ENSSHBG00005003813 ENSSHBG00005004103 STAM (ENSSHBG00005004537) HACD1 (ENSSHBG00005004548) ##22 ST8SIA6 (ENSSHBG00005004559) VIM (ENSSHBG00005004571) TRDMT1 (ENSSHBG00005004581) ENSSHBG00005004584 ENSSHBG00005004590 ENSSHBG00005004593 ENSSHBG00005004598 ENSSHBG00005004603 ENSSHBG00005004613 ENSSHBG00005004623 RSU1 (ENSSHBG00005004630) C1QL3 (ENSSHBG00005004636) PTER (ENSSHBG00005004643) ENSSHBG00005004650 MINDY3 (ENSSHBG00005004658) Passeriformes ANCESTRAL SPECIES ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00960000189558 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Great tit MODERN SPECIES 11 SKIDA1 (ENSPMJG00000006471) ENSPMJG00000006602 NEBL (ENSPMJG00000006606) PLXDC2 (ENSPMJG00000006651) MALRD1 (ENSPMJG00000006730) ARL5B (ENSPMJG00000006753) NSUN6 (ENSPMJG00000006756) CACNB2 (ENSPMJG00000006865) SLC39A12 (ENSPMJG00000006880) ENSPMJG00000006955 ENSPMJG00000006963 ENSPMJG00000006975 ENSPMJG00000006980 ENSPMJG00000006984 STAM (ENSPMJG00000006990) HACD1 (ENSPMJG00000007005) ##22 ST8SIA6 (ENSPMJG00000007015) VIM (ENSPMJG00000007020) TRDMT1 (ENSPMJG00000007022) CUBN (ENSPMJG00000007045) RSU1 (ENSPMJG00000007083) C1QL3 (ENSPMJG00000007086) PTER (ENSPMJG00000007088) ENSPMJG00000007090 MINDY3 (ENSPMJG00000007094) ITGA8 (ENSPMJG00000007132) FAM171A1 (ENSPMJG00000007141) NMT2 (ENSPMJG00000007143) ENSPMJG00000007146 OLAH (ENSPMJG00000007151) CROT (ENSPMJG00000007155) Passeriformes_d ANCESTRAL SPECIES ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00960000189558 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Passeriformes_g ANCESTRAL SPECIES 6 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00960000189558 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Passeroidea ANCESTRAL SPECIES 6 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00960000189558 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Zebra finch MODERN SPECIES 12 SKIDA1 (ENSTGUG00000029699) ENSTGUG00000019734 NEBL (ENSTGUG00000001221) PLXDC2 (ENSTGUG00000001224) MALRD1 (ENSTGUG00000001231) ARL5B (ENSTGUG00000001236) NSUN6 (ENSTGUG00000001241) CACNB2 (ENSTGUG00000001247) SLC39A12 (ENSTGUG00000001259) ENSTGUG00000001263 ENSTGUG00000029091 ENSTGUG00000001271 ENSTGUG00000026993 ENSTGUG00000001273 STAM (ENSTGUG00000001285) HACD1 (ENSTGUG00000021209) ##22 ST8SIA6 (ENSTGUG00000001296) VIM (ENSTGUG00000001298) TRDMT1 (ENSTGUG00000001306) CUBN (ENSTGUG00000001311) RSU1 (ENSTGUG00000001318) C1QL3 (ENSTGUG00000001322) PTER (ENSTGUG00000001327) MINDY3 (ENSTGUG00000001331) ITGA8 (ENSTGUG00000001333) FAM171A1 (ENSTGUG00000001352) NMT2 (ENSTGUG00000001356) RPP38 (ENSTGUG00000025595) OLAH (ENSTGUG00000001368) CROT (ENSTGUG00000001370) ABCB1 (ENSTGUG00000001378) Common canary MODERN SPECIES 5 DNAJC1 (ENSSCAG00000010104) MLLT10 (ENSSCAG00000010116) NEBL (ENSSCAG00000010164) PLXDC2 (ENSSCAG00000010303) MALRD1 (ENSSCAG00000010320) ENSSCAG00000010335 NSUN6 (ENSSCAG00000010338) CACNB2 (ENSSCAG00000010347) SLC39A12 (ENSSCAG00000010369) ENSSCAG00000010386 ENSSCAG00000010421 ENSSCAG00000010468 ENSSCAG00000010793 ENSSCAG00000010802 STAM (ENSSCAG00000010810) HACD1 (ENSSCAG00000010816) ##22 ST8SIA6 (ENSSCAG00000010824) VIM (ENSSCAG00000010827) TRDMT1 (ENSSCAG00000010834) CUBN (ENSSCAG00000010925) RSU1 (ENSSCAG00000011286) PTER (ENSSCAG00000011293) ENSSCAG00000011300 MINDY3 (ENSSCAG00000011330) ITGA8 (ENSSCAG00000011381) FAM171A1 (ENSSCAG00000011440) NMT2 (ENSSCAG00000011448) OLAH (ENSSCAG00000011456) ACBD7 (ENSSCAG00000011462) CROT (ENSSCAG00000011469) ABCB1 (ENSSCAG00000011478) Medium ground finch MODERN SPECIES 10 MLLT10 (ENSGFOG00000000706) ENSGFOG00000000681 ENSGFOG00000000665 ENSGFOG00000000628 PLXDC2 (ENSGFOG00000000486) MALRD1 (ENSGFOG00000000434) ARL5B (ENSGFOG00000000422) NSUN6 (ENSGFOG00000000407) CACNB2 (ENSGFOG00000000374) SLC39A12 (ENSGFOG00000000346) ENSGFOG00000000316 ENSGFOG00000014432 ENSGFOG00000014377 ENSGFOG00000014111 STAM (ENSGFOG00000014066) HACD1 (ENSGFOG00000014059) ##22 ST8SIA6 (ENSGFOG00000014055) VIM (ENSGFOG00000014051) TRDMT1 (ENSGFOG00000014049) CUBN (ENSGFOG00000014037) RSU1 (ENSGFOG00000014035) PTER (ENSGFOG00000014032) MINDY3 (ENSGFOG00000014027) ITGA8 (ENSGFOG00000014009) FAM171A1 (ENSGFOG00000014004) NMT2 (ENSGFOG00000013998) RPP38 (ENSGFOG00000013994) ACBD7 (ENSGFOG00000013991) OLAH (ENSGFOG00000013986) CROT (ENSGFOG00000013984) ABCB1 (ENSGFOG00000004484) Flycatcher MODERN SPECIES 11 DNAJC1 (ENSFALG00000007315) MLLT10 (ENSFALG00000007325) NEBL (ENSFALG00000007351) PLXDC2 (ENSFALG00000007373) MALRD1 (ENSFALG00000026603) ARL5B (ENSFALG00000023860) NSUN6 (ENSFALG00000007398) CACNB2 (ENSFALG00000007405) SLC39A12 (ENSFALG00000007417) ENSFALG00000007420 ENSFALG00000007425 ENSFALG00000007432 ENSFALG00000007434 ENSFALG00000007442 STAM (ENSFALG00000007444) HACD1 (ENSFALG00000027397) ##22 ST8SIA6 (ENSFALG00000007452) VIM (ENSFALG00000007457) TRDMT1 (ENSFALG00000007459) CUBN (ENSFALG00000007461) RSU1 (ENSFALG00000007468) C1QL3 (ENSFALG00000023678) PTER (ENSFALG00000024023) MINDY3 (ENSFALG00000007485) ITGA8 (ENSFALG00000007532) FAM171A1 (ENSFALG00000028743) NMT2 (ENSFALG00000007645) ENSFALG00000023266 ACBD7 (ENSFALG00000007655) OLAH (ENSFALG00000007661) CROT (ENSFALG00000007668) Galloanserae ANCESTRAL SPECIES ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00960000189558 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00960000189558 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Japanese quail MODERN SPECIES 11 SKIDA1 (ENSCJPG00005004088) ENSCJPG00005004092 NEBL (ENSCJPG00005004095) PLXDC2 (ENSCJPG00005004100) MALRD1 (ENSCJPG00005004109) ARL5B (ENSCJPG00005004129) NSUN6 (ENSCJPG00005004131) CACNB2 (ENSCJPG00005004139) SLC39A12 (ENSCJPG00005004149) ENSCJPG00005004153 ENSCJPG00005004199 ENSCJPG00005004211 ENSCJPG00005004408 ENSCJPG00005005384 STAM (ENSCJPG00005005400) HACD1 (ENSCJPG00005005404) ##22 ST8SIA6 (ENSCJPG00005005406) VIM (ENSCJPG00005005415) TRDMT1 (ENSCJPG00005005424) CUBN (ENSCJPG00005005456) RSU1 (ENSCJPG00005005706) C1QL3 (ENSCJPG00005005709) PTER (ENSCJPG00005005711) ENSCJPG00005005714 MINDY3 (ENSCJPG00005005792) ITGA8 (ENSCJPG00005005794) FAM171A1 (ENSCJPG00005005906) NMT2 (ENSCJPG00005005908) RPP38 (ENSCJPG00005005919) ACBD7 (ENSCJPG00005005924) OLAH (ENSCJPG00005005927) Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b.a ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT01060000248556.C Chicken MODERN SPECIES 11 MLLT10 (ENSGALG00010005895) SKIDA1 (ENSGALG00010006289) NEBL (ENSGALG00010005836) PLXDC2 (ENSGALG00010005966) MALRD1 (ENSGALG00010006009) ARL5B (ENSGALG00010006028) NSUN6 (ENSGALG00010006033) CACNB2 (ENSGALG00010006083) SLC39A12 (ENSGALG00010006104) ENSGALG00010006126 ENSGALG00010006147 MMR1L3 (ENSGALG00010006176) MMR1L4 (ENSGALG00010006203) MRC1 (ENSGALG00010006241) STAM (ENSGALG00010006270) HACD1 (ENSGALG00010006279) ##22 ST8SIA6 (ENSGALG00010004172) VIM (ENSGALG00010004281) TRDMT1 (ENSGALG00010004323) CUBN (ENSGALG00010004534) RSU1 (ENSGALG00010004568) C1QL3 (ENSGALG00010004722) PTER (ENSGALG00010004751) MINDY3 (ENSGALG00010004588) ITGA8 (ENSGALG00010003222) FAM171A1 (ENSGALG00010002805) NMT2 (ENSGALG00010002598) RPP38 (ENSGALG00010002608) ACBD7 (ENSGALG00010002661) OLAH (ENSGALG00010002679) CROT (ENSGALG00010004137) Turkey MODERN SPECIES 26 ACBD7 (ENSMGAG00000018694) ENSMGAG00000008227 NMT2 (ENSMGAG00000008184) ENSMGAG00000020791 ENSMGAG00000007910 ENSMGAG00000022862 ENSMGAG00000019316 ENSMGAG00000007875 ENSMGAG00000007866 ENSMGAG00000007849 ENSMGAG00000007787 ENSMGAG00000022867 ENSMGAG00000007744 ENSMGAG00000007735 ENSMGAG00000007705 ENSMGAG00000007688 ##22 ENSMGAG00000007644 ENSMGAG00000007520 ENSMGAG00000007578 ENSMGAG00000018238 ENSMGAG00000018324 ENSMGAG00000020483 ENSMGAG00000007487 ENSMGAG00000007454 ENSMGAG00000021324 ENSMGAG00000007427 ENSMGAG00000007409 ENSMGAG00000007404 ENSMGAG00000018445 ENSMGAG00000012275 ENSMGAG00000022005 Anatidae ANCESTRAL SPECIES 1 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.b ENSGT01050000244842.a.a.a.a.a.a.a ENSGT01050000244842.a.a.a.a.b ENSGT01050000244842.a.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT01060000248556.C Pink-footed goose MODERN SPECIES STAM (ENSABRG00000017287) HACD1 (ENSABRG00000017253) ##22 ST8SIA6 (ENSABRG00000017238) VIM (ENSABRG00000017210) TRDMT1 (ENSABRG00000017192) CUBN (ENSABRG00000016722) RSU1 (ENSABRG00000016562) C1QL3 (ENSABRG00000016535) PTER (ENSABRG00000016529) MINDY3 (ENSABRG00000016496) ITGA8 (ENSABRG00000016452) FAM171A1 (ENSABRG00000016400) NMT2 (ENSABRG00000016361) ENSABRG00000016338 ENSABRG00000016322 ACBD7 (ENSABRG00000016308) OLAH (ENSABRG00000016301) Duck MODERN SPECIES 10 PLXDC2 (ENSAPLG00000013705) ENSAPLG00000017151 MALRD1 (ENSAPLG00000023464) ARL5B (ENSAPLG00000024734) NSUN6 (ENSAPLG00000013473) CACNB2 (ENSAPLG00000013189) ENSAPLG00000020048 SLC39A12 (ENSAPLG00000013036) ENSAPLG00000012345 ENSAPLG00000022900 ENSAPLG00000012332 ENSAPLG00000012263 ENSAPLG00000012212 ENSAPLG00000011459 STAM (ENSAPLG00000010967) HACD1 (ENSAPLG00000010942) ##22 ST8SIA6 (ENSAPLG00000010714) VIM (ENSAPLG00000010218) TRDMT1 (ENSAPLG00000004660) CUBN (ENSAPLG00000003733) RSU1 (ENSAPLG00000003574) C1QL3 (ENSAPLG00000001458) PTER (ENSAPLG00000031164) MINDY3 (ENSAPLG00000012165) ITGA8 (ENSAPLG00000012455) FAM171A1 (ENSAPLG00000013617) NMT2 (ENSAPLG00000013818) RPP38 (ENSAPLG00000002054) ACBD7 (ENSAPLG00000014167) OLAH (ENSAPLG00000014174) CROT (ENSAPLG00000014281) African ostrich MODERN SPECIES 561 ENSSCUG00000007709 NEBL (ENSSCUG00000007711) ENSSCUG00000007716 PLXDC2 (ENSSCUG00000007718) MALRD1 (ENSSCUG00000007733) ARL5B (ENSSCUG00000007751) NSUN6 (ENSSCUG00000007752) CACNB2 (ENSSCUG00000007755) SLC39A12 (ENSSCUG00000007757) ENSSCUG00000007760 ENSSCUG00000007764 ENSSCUG00000007794 ENSSCUG00000007849 ENSSCUG00000007863 STAM (ENSSCUG00000007870) HACD1 (ENSSCUG00000007875) ##22 ST8SIA6 (ENSSCUG00000007878) VIM (ENSSCUG00000007880) TRDMT1 (ENSSCUG00000007884) CUBN (ENSSCUG00000007907) RSU1 (ENSSCUG00000007938) PTER (ENSSCUG00000007941) Australian saltwater crocodile MODERN SPECIES MLLT10 (ENSCPRG00005009200) ENSCPRG00005009427 NEBL (ENSCPRG00005009479) ENSCPRG00005009623 PLXDC2 (ENSCPRG00005009682) MALRD1 (ENSCPRG00005009916) ARL5B (ENSCPRG00005009964) NSUN6 (ENSCPRG00005009966) CACNB2 (ENSCPRG00005010070) SLC39A12 (ENSCPRG00005010511) ENSCPRG00005010518 ENSCPRG00005010595 ENSCPRG00005010724 ENSCPRG00005010791 STAM (ENSCPRG00005011192) HACD1 (ENSCPRG00005011207) ##22 ST8SIA6 (ENSCPRG00005011229) VIM (ENSCPRG00005011234) TRDMT1 (ENSCPRG00005011237) CUBN (ENSCPRG00005011254) RSU1 (ENSCPRG00005011434) PTER (ENSCPRG00005011445) MINDY3 (ENSCPRG00005011496) ITGA8 (ENSCPRG00005011517) FAM171A1 (ENSCPRG00005011587) NMT2 (ENSCPRG00005011668) RPP38 (ENSCPRG00005011674) ACBD7 (ENSCPRG00005011680) OLAH (ENSCPRG00005011683) CROT (ENSCPRG00005011686) ABCB4 (ENSCPRG00005011694) Mammalia ANCESTRAL SPECIES 4 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Theria ANCESTRAL SPECIES ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Marsupialia ANCESTRAL SPECIES 4 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958.d ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Marsupialia_b ANCESTRAL SPECIES 10 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958.d ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Diprotodontia ANCESTRAL SPECIES 18 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00940000155958.d ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT01060000248556.C Diprotodontia_a ANCESTRAL SPECIES 20 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00910000145890 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00940000155958.d ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT01060000248556.C Common wonbat MODERN SPECIES 329 COMMD3 (ENSVURG00010023256) DNAJC1 (ENSVURG00010023254) MLLT10 (ENSVURG00010023240) SKIDA1 (ENSVURG00010023237) NEBL (ENSVURG00010023232) PLXDC2 (ENSVURG00010023231) ENSVURG00010023230 MALRD1 (ENSVURG00010023217) ARL5B (ENSVURG00010023212) NSUN6 (ENSVURG00010023209) CACNB2 (ENSVURG00010023195) SLC39A12 (ENSVURG00010023181) MRC1 (ENSVURG00010023171) TMEM236 (ENSVURG00010023167) STAM (ENSVURG00010023162) HACD1 (ENSVURG00010023159) ##22 ST8SIA6 (ENSVURG00010023156) VIM (ENSVURG00010023151) TRDMT1 (ENSVURG00010023147) CUBN (ENSVURG00010023102) RSU1 (ENSVURG00010023079) C1QL3 (ENSVURG00010023075) MINDY3 (ENSVURG00010023070) ITGA8 (ENSVURG00010023059) FAM171A1 (ENSVURG00010023047) RPP38 (ENSVURG00010023042) NMT2 (ENSVURG00010023015) ENSVURG00010023003 CROT (ENSVURG00010022991) ABCB1 (ENSVURG00010022915) RUNDC3B (ENSVURG00010022885) koala MODERN SPECIES 168 DNAJC1 (ENSPCIG00000025684) MLLT10 (ENSPCIG00000025692) SKIDA1 (ENSPCIG00000025701) ENSPCIG00000026966 NEBL (ENSPCIG00000008919) ENSPCIG00000008922 PLXDC2 (ENSPCIG00000008924) MALRD1 (ENSPCIG00000008927) ARL5B (ENSPCIG00000008947) NSUN6 (ENSPCIG00000008953) CACNB2 (ENSPCIG00000008958) SLC39A12 (ENSPCIG00000021044) MRC1 (ENSPCIG00000021043) TMEM236 (ENSPCIG00000009698) STAM (ENSPCIG00000021041) ENSPCIG00000021038 ##22 ST8SIA6 (ENSPCIG00000021035) VIM (ENSPCIG00000021032) TRDMT1 (ENSPCIG00000021030) ENSPCIG00000021029 ENSPCIG00000021019 RSU1 (ENSPCIG00000021017) C1QL3 (ENSPCIG00000021016) Wallaby MODERN SPECIES 7287 ENSMEUG00000015328 ##22 Tasmanian devil MODERN SPECIES 4 BMI1 (ENSSHAG00000021675) COMMD3 (ENSSHAG00000027425) DNAJC1 (ENSSHAG00000014587) MLLT10 (ENSSHAG00000015106) SKIDA1 (ENSSHAG00000015799) NEBL (ENSSHAG00000017199) PLXDC2 (ENSSHAG00000020724) ENSSHAG00000024169 ENSSHAG00000032181 ARL5B (ENSSHAG00000027950) NSUN6 (ENSSHAG00000008315) CACNB2 (ENSSHAG00000025230) SLC39A12 (ENSSHAG00000011792) MRC1 (ENSSHAG00000012471) STAM (ENSSHAG00000013302) HACD1 (ENSSHAG00000031104) ##22 ST8SIA6 (ENSSHAG00000026405) VIM (ENSSHAG00000022351) TRDMT1 (ENSSHAG00000030773) CUBN (ENSSHAG00000015092) RSU1 (ENSSHAG00000001959) C1QL3 (ENSSHAG00000029157) PTER (ENSSHAG00000007299) MINDY3 (ENSSHAG00000012259) ITGA8 (ENSSHAG00000012975) FAM171A1 (ENSSHAG00000014851) NMT2 (ENSSHAG00000015403) RPP38 (ENSSHAG00000015529) ENSSHAG00000015610 ENSSHAG00000022520 ENSSHAG00000015904 Opossum MODERN SPECIES 7 SPAG6 (ENSMODG00000009058) BMI1 (ENSMODG00000009085) ENSMODG00000009090 DNAJC1 (ENSMODG00000009100) MLLT10 (ENSMODG00000009138) SKIDA1 (ENSMODG00000009147) NEBL (ENSMODG00000009210) PLXDC2 (ENSMODG00000009233) MALRD1 (ENSMODG00000009440) ARL5B (ENSMODG00000009449) NSUN6 (ENSMODG00000009471) CACNB2 (ENSMODG00000009618) SLC39A12 (ENSMODG00000009637) MRC1 (ENSMODG00000009695) STAM (ENSMODG00000009719) ENSMODG00000009722 ##22 ST8SIA6 (ENSMODG00000009729) VIM (ENSMODG00000009818) TRDMT1 (ENSMODG00000009844) CUBN (ENSMODG00000009905) RSU1 (ENSMODG00000009942) C1QL3 (ENSMODG00000009948) PTER (ENSMODG00000009960) ENSMODG00000044721 ENSMODG00000010034 ITGA8 (ENSMODG00000010054) FAM171A1 (ENSMODG00000010064) NMT2 (ENSMODG00000010083) ENSMODG00000024091 ACBD7 (ENSMODG00000010098) ENSMODG00000010106 Eutheria ANCESTRAL SPECIES 1 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000165398 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Boreoeutheria ANCESTRAL SPECIES 23 ENSGT00410000028443 ENSGT00940000172425 ENSGT00410000028701 ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000165398 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Laurasiatheria ANCESTRAL SPECIES 27 ENSGT00410000028443 ENSGT00940000172425 ENSGT00410000028701 ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000165398 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT01090000260046 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 Laurasiatheria_a ANCESTRAL SPECIES 22 ENSGT00410000028443 ENSGT00940000172425 ENSGT00410000028701 ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000165398 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Artiodactyla ANCESTRAL SPECIES 29 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Suina ANCESTRAL SPECIES 43 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158727 ENSGT00940000155003.e.a ENSGT00940000154801 ENSGT00950000182860.a.a.b ENSGT00950000183208.B ENSGT00390000014526 ENSGT00940000154653 ENSGT00390000015348 ENSGT00940000158582 ENSGT00940000158806 ENSGT00940000159227 Chacoan peccary MODERN SPECIES 914 NSUN6 (ENSCWAG00000021082) CACNB2 (ENSCWAG00000016665) SLC39A12 (ENSCWAG00000016047) MRC1 (ENSCWAG00000015855) TMEM236 (ENSCWAG00000015817) STAM (ENSCWAG00000015782) HACD1 (ENSCWAG00000015751) ##22 ST8SIA6 (ENSCWAG00000015629) VIM (ENSCWAG00000015549) TRDMT1 (ENSCWAG00000015479) CUBN (ENSCWAG00000014947) ENSCWAG00000014881 ENSCWAG00000014737 EPC1 (ENSCWAG00000014516) KIF5B (ENSCWAG00000014452) ARHGAP12 (ENSCWAG00000014222) ZEB1 (ENSCWAG00000013953) ENSCWAG00000013849 SVIL (ENSCWAG00000011924) JCAD (ENSCWAG00000011758) MTPAP (ENSCWAG00000019204) MAP3K8 (ENSCWAG00000019170) Pig MODERN SPECIES 1 ITGA8 (ENSSSCG00000011046) MINDY3 (ENSSSCG00000011045) PTER (ENSSSCG00000022953) C1QL3 (ENSSSCG00000011043) ENSSSCG00000049099 ENSSSCG00000044626 RSU1 (ENSSSCG00000011042) ENSSSCG00000061431 NSUN6 (ENSSSCG00000011041) ENSSSCG00000047783 CACNB2 (ENSSSCG00000011040) SLC39A12 (ENSSSCG00000011039) MRC1 (ENSSSCG00000011038) TMEM236 (ENSSSCG00000011037) STAM (ENSSSCG00000011036) HACD1 (ENSSSCG00000038007) ##22 ENSSSCG00000026941 ENSSSCG00000046521 ST8SIA6 (ENSSSCG00000011034) VIM (ENSSSCG00000011033) TRDMT1 (ENSSSCG00000021309) CUBN (ENSSSCG00000011030) ENSSSCG00000048231 PTCHD3 (ENSSSCG00000022045) ENSSSCG00000055608 EPC1 (ENSSSCG00000011028) ENSSSCG00000051254 ENSSSCG00000045198 KIF5B (ENSSSCG00000011027) ENSSSCG00000056707 ARHGAP12 (ENSSSCG00000011026) Artiodactyla_a ANCESTRAL SPECIES 31 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Artiodactyla_b ANCESTRAL SPECIES 27 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Pecora ANCESTRAL SPECIES 9 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Percora_a ANCESTRAL SPECIES 10 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Bovidae ANCESTRAL SPECIES 10 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Caprinae ANCESTRAL SPECIES 23 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 4 JCAD (ENSOARG00020020123) ENSOARG00020020101 SVIL (ENSOARG00020018385) ZEB1 (ENSOARG00020017442) ARHGAP12 (ENSOARG00020015348) ENSOARG00020015209 KIF5B (ENSOARG00020014964) ENSOARG00020014851 EPC1 (ENSOARG00020014149) NSUN6 (ENSOARG00020013758) ENSOARG00020013702 CACNB2 (ENSOARG00020006219) SLC39A12 (ENSOARG00020005721) ENSOARG00020005707 STAM (ENSOARG00020005528) HACD1 (ENSOARG00020005459) ##22 ST8SIA6 (ENSOARG00020005407) VIM (ENSOARG00020005389) TRDMT1 (ENSOARG00020005317) CUBN (ENSOARG00020004954) RSU1 (ENSOARG00020004875) C1QL3 (ENSOARG00020004850) PTER (ENSOARG00020004818) ENSOARG00020004767 ##22 FAM171A1 (ENSOARG00020004655) NMT2 (ENSOARG00020004548) RPP38 (ENSOARG00020004529) ACBD7 (ENSOARG00020004504) ENSOARG00020004485 MEIG1 (ENSOARG00020004468) DCLRE1C (ENSOARG00020004240) Rambouillet Sheep MODERN SPECIES 4 EPC1 (ENSOARG00020014149) NSUN6 (ENSOARG00020013758) ENSOARG00020013702 CACNB2 (ENSOARG00020006219) SLC39A12 (ENSOARG00020005721) ENSOARG00020005707 STAM (ENSOARG00020005528) HACD1 (ENSOARG00020005459) ##22 ST8SIA6 (ENSOARG00020005407) VIM (ENSOARG00020005389) TRDMT1 (ENSOARG00020005317) CUBN (ENSOARG00020004954) RSU1 (ENSOARG00020004875) C1QL3 (ENSOARG00020004850) PTER (ENSOARG00020004818) ENSOARG00020004767 ##22 FAM171A1 (ENSOARG00020004655) NMT2 (ENSOARG00020004548) RPP38 (ENSOARG00020004529) ACBD7 (ENSOARG00020004504) ENSOARG00020004485 MEIG1 (ENSOARG00020004468) DCLRE1C (ENSOARG00020004240) SUV39H2 (ENSOARG00020004144) HSPA14 (ENSOARG00020003953) FAM107B (ENSOARG00020003835) FRMD4A (ENSOARG00020003547) PRPF18 (ENSOARG00020003496) ENSOARG00020003435 SEPHS1 (ENSOARG00020003364) PHYH (ENSOARG00020003287) Goat MODERN SPECIES 4 MTPAP (ENSCHIG00000025725) JCAD (ENSCHIG00000013597) ENSCHIG00000023018 SVIL (ENSCHIG00000016403) ZNF438 (ENSCHIG00000013980) ZEB1 (ENSCHIG00000016385) ARHGAP12 (ENSCHIG00000024718) KIF5B (ENSCHIG00000019020) EPC1 (ENSCHIG00000005911) NSUN6 (ENSCHIG00000012618) CACNB2 (ENSCHIG00000001734) SLC39A12 (ENSCHIG00000024612) MRC1 (ENSCHIG00000023775) TMEM236 (ENSCHIG00000002738) STAM (ENSCHIG00000004568) HACD1 (ENSCHIG00000026086) ##22 ST8SIA6 (ENSCHIG00000026819) VIM (ENSCHIG00000020459) TRDMT1 (ENSCHIG00000017788) CUBN (ENSCHIG00000019577) RSU1 (ENSCHIG00000015471) C1QL3 (ENSCHIG00000018119) PTER (ENSCHIG00000002557) MINDY3 (ENSCHIG00000011745) ITGA8 (ENSCHIG00000017512) FAM171A1 (ENSCHIG00000008876) NMT2 (ENSCHIG00000017557) RPP38 (ENSCHIG00000012484) ACBD7 (ENSCHIG00000023426) MEIG1 (ENSCHIG00000021538) DCLRE1C (ENSCHIG00000015648) Bovinae ANCESTRAL SPECIES 20 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Bos ANCESTRAL SPECIES 22 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT01100000263481.n.a.b.a.a.a.a.a.b.a.b ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Bos_b ANCESTRAL SPECIES 4 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT01100000263481.n.a.b.a.a.a.a.a.b.a.b ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Hybrid Bos Indicus MODERN SPECIES 4 ZNF438 (ENSBIXG00005028822) ENSBIXG00005028798 ENSBIXG00005028781 ZEB1 (ENSBIXG00005004971) ARHGAP12 (ENSBIXG00005028591) KIF5B (ENSBIXG00005028451) EPC1 (ENSBIXG00005028386) ENSBIXG00005028328 NSUN6 (ENSBIXG00005028312) CACNB2 (ENSBIXG00005005335) ENSBIXG00005026875 ENSBIXG00005004587 SLC39A12 (ENSBIXG00005026797) MRC1 (ENSBIXG00005026627) STAM (ENSBIXG00005004538) HACD1 (ENSBIXG00005004526) ##22 ST8SIA6 (ENSBIXG00005004520) VIM (ENSBIXG00005026430) TRDMT1 (ENSBIXG00005026377) ENSBIXG00005004488 CUBN (ENSBIXG00005026292) RSU1 (ENSBIXG00005026245) C1QL3 (ENSBIXG00005026191) PTER (ENSBIXG00005026166) ENSBIXG00005026133 ENSBIXG00005026124 MINDY3 (ENSBIXG00005004454) ITGA8 (ENSBIXG00005026053) FAM171A1 (ENSBIXG00005007634) NMT2 (ENSBIXG00005025974) RPP38 (ENSBIXG00005006695) Cow MODERN SPECIES 4 MTPAP (ENSBTAG00000004387) JCAD (ENSBTAG00000001204) SVIL (ENSBTAG00000027444) ZNF438 (ENSBTAG00000016294) ZEB1 (ENSBTAG00000020053) ARHGAP12 (ENSBTAG00000012677) KIF5B (ENSBTAG00000002280) EPC1 (ENSBTAG00000001552) NSUN6 (ENSBTAG00000022003) ENSBTAG00000055031 CACNB2 (ENSBTAG00000022000) SLC39A12 (ENSBTAG00000015525) MRC1 (ENSBTAG00000038048) TMEM236 (ENSBTAG00000053135) STAM (ENSBTAG00000002658) HACD1 (ENSBTAG00000033089) ##22 ST8SIA6 (ENSBTAG00000011366) VIM (ENSBTAG00000018463) TRDMT1 (ENSBTAG00000020546) CUBN (ENSBTAG00000005072) RSU1 (ENSBTAG00000027446) C1QL3 (ENSBTAG00000016677) ENSBTAG00000048616 PTER (ENSBTAG00000016676) MINDY3 (ENSBTAG00000010387) ITGA8 (ENSBTAG00000007602) FAM171A1 (ENSBTAG00000008787) NMT2 (ENSBTAG00000007703) RPP38 (ENSBTAG00000007702) ACBD7 (ENSBTAG00000002858) OLAH (ENSBTAG00000047454) Bos_a ANCESTRAL SPECIES 71 ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT01100000263481.n.a.b.a.a.a.a.a.b.a.b ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00960000189936 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 ENSGT00940000157779 ENSGT00940000156788.a.b Wild yak MODERN SPECIES 445 ARHGAP12 (ENSBMUG00000009341) KIF5B (ENSBMUG00000009174) EPC1 (ENSBMUG00000009137) NSUN6 (ENSBMUG00000009106) ENSBMUG00000009101 CACNB2 (ENSBMUG00000008982) SLC39A12 (ENSBMUG00000008793) MRC1 (ENSBMUG00000008715) TMEM236 (ENSBMUG00000008675) STAM (ENSBMUG00000008658) HACD1 (ENSBMUG00000008648) ##22 ST8SIA6 (ENSBMUG00000008637) VIM (ENSBMUG00000008628) TRDMT1 (ENSBMUG00000008615) CUBN (ENSBMUG00000008555) ENSBMUG00000008450 American bison MODERN SPECIES 3321 MAP3K8 (ENSBBBG00000012373) MTPAP (ENSBBBG00000002348) JCAD (ENSBBBG00000002349) SVIL (ENSBBBG00000012559) ENSBBBG00000012576 ZEB1 (ENSBBBG00000012628) ARHGAP12 (ENSBBBG00000012781) KIF5B (ENSBBBG00000012809) EPC1 (ENSBBBG00000012832) NSUN6 (ENSBBBG00000012847) CACNB2 (ENSBBBG00000013199) SLC39A12 (ENSBBBG00000001627) MRC1 (ENSBBBG00000013312) TMEM236 (ENSBBBG00000001611) STAM (ENSBBBG00000013330) HACD1 (ENSBBBG00000013342) ##22 ST8SIA6 (ENSBBBG00000013364) VIM (ENSBBBG00000001580) TRDMT1 (ENSBBBG00000001568) CUBN (ENSBBBG00000013554) RSU1 (ENSBBBG00000013588) C1QL3 (ENSBBBG00000013594) ENSBBBG00000002823 PTER (ENSBBBG00000007598) MINDY3 (ENSBBBG00000013617) ITGA8 (ENSBBBG00000013651) FAM171A1 (ENSBBBG00000001531) NMT2 (ENSBBBG00000002912) RPP38 (ENSBBBG00000002914) ACBD7 (ENSBBBG00000002916) ENSBBBG00000002919 Siberian musk deer MODERN SPECIES 1194 ENSMMSG00000021468 MTPAP (ENSMMSG00000021481) JCAD (ENSMMSG00000021503) SVIL (ENSMMSG00000021607) ZNF438 (ENSMMSG00000022314) ZEB1 (ENSMMSG00000022330) ARHGAP12 (ENSMMSG00000022385) KIF5B (ENSMMSG00000022465) EPC1 (ENSMMSG00000022508) NSUN6 (ENSMMSG00000022563) CACNB2 (ENSMMSG00000022644) SLC39A12 (ENSMMSG00000022883) MRC1 (ENSMMSG00000022996) TMEM236 (ENSMMSG00000023008) STAM (ENSMMSG00000023014) HACD1 (ENSMMSG00000004759) ##22 ST8SIA6 (ENSMMSG00000004799) VIM (ENSMMSG00000004853) ENSMMSG00000004895 TRDMT1 (ENSMMSG00000004916) CUBN (ENSMMSG00000005129) RSU1 (ENSMMSG00000006752) C1QL3 (ENSMMSG00000006808) PTER (ENSMMSG00000006831) MINDY3 (ENSMMSG00000006916) ITGA8 (ENSMMSG00000007092) FAM171A1 (ENSMMSG00000007325) NMT2 (ENSMMSG00000007360) ACBD7 (ENSMMSG00000007400) ENSMMSG00000007424 MEIG1 (ENSMMSG00000007439) Yarkand deer MODERN SPECIES 15 MTPAP (ENSCHYG00000014688) JCAD (ENSCHYG00000014634) ENSCHYG00000014570 SVIL (ENSCHYG00000013800) ZNF438 (ENSCHYG00000013696) ZEB1 (ENSCHYG00000024350) ARHGAP12 (ENSCHYG00000023950) KIF5B (ENSCHYG00000023791) EPC1 (ENSCHYG00000023581) NSUN6 (ENSCHYG00000023455) CACNB2 (ENSCHYG00000020467) SLC39A12 (ENSCHYG00000020036) ENSCHYG00000020009 MRC1 (ENSCHYG00000018709) STAM (ENSCHYG00000018548) HACD1 (ENSCHYG00000017477) ##22 ST8SIA6 (ENSCHYG00000017336) VIM (ENSCHYG00000017204) TRDMT1 (ENSCHYG00000017043) ENSCHYG00000016991 ENSCHYG00000016959 ENSCHYG00000016940 CUBN (ENSCHYG00000014261) RSU1 (ENSCHYG00000013881) C1QL3 (ENSCHYG00000013834) PTER (ENSCHYG00000013731) ENSCHYG00000013633 ITGA8 (ENSCHYG00000013486) FAM171A1 (ENSCHYG00000013348) NMT2 (ENSCHYG00000013207) RPP38 (ENSCHYG00000013171) Cetacea ANCESTRAL SPECIES 2 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171.a ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000173025.c ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Odontoceti ANCESTRAL SPECIES 2 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171.a ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000173025.c ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171.a ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000173025.c ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171.a ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000173025.c ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000013550 Monodontidae ANCESTRAL SPECIES 22 ENSGT00940000158806 ENSGT00940000158582 ENSGT00390000015348 ENSGT00940000154653 ENSGT00390000014526 ENSGT00950000183208.B ENSGT00950000182860.a.a.b ENSGT00940000154801 ENSGT00940000155003.e.a ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171.a ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000173025.c ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000013550 Beluga whale MODERN SPECIES 22 MAP3K8 (ENSDLEG00000005174) MTPAP (ENSDLEG00000005158) JCAD (ENSDLEG00000005152) SVIL (ENSDLEG00000005140) ZNF438 (ENSDLEG00000005135) ZEB1 (ENSDLEG00000005124) ENSDLEG00000004999 KIF5B (ENSDLEG00000004901) EPC1 (ENSDLEG00000004886) NSUN6 (ENSDLEG00000004870) CACNB2 (ENSDLEG00000004854) SLC39A12 (ENSDLEG00000004830) MRC1 (ENSDLEG00000004805) TMEM236 (ENSDLEG00000004796) STAM (ENSDLEG00000004781) HACD1 (ENSDLEG00000004764) ##22 ENSDLEG00000004758 ST8SIA6 (ENSDLEG00000004749) VIM (ENSDLEG00000004737) TRDMT1 (ENSDLEG00000004726) CUBN (ENSDLEG00000004027) RSU1 (ENSDLEG00000003890) C1QL3 (ENSDLEG00000003873) PTER (ENSDLEG00000003863) ENSDLEG00000003856 MINDY3 (ENSDLEG00000003845) ITGA8 (ENSDLEG00000003684) FAM171A1 (ENSDLEG00000003643) NMT2 (ENSDLEG00000003636) RPP38 (ENSDLEG00000003631) ACBD7 (ENSDLEG00000003626) Narwhal MODERN SPECIES 308 MAP3K8 (ENSMMNG00015009804) MTPAP (ENSMMNG00015009838) JCAD (ENSMMNG00015009858) SVIL (ENSMMNG00015009882) ZNF438 (ENSMMNG00015009919) ZEB1 (ENSMMNG00015009952) ENSMMNG00015010014 KIF5B (ENSMMNG00015010082) EPC1 (ENSMMNG00015010126) NSUN6 (ENSMMNG00015011825) CACNB2 (ENSMMNG00015012153) SLC39A12 (ENSMMNG00015012761) MRC1 (ENSMMNG00015012890) TMEM236 (ENSMMNG00015012921) STAM (ENSMMNG00015012944) HACD1 (ENSMMNG00015013001) ##22 ST8SIA6 (ENSMMNG00015013019) VIM (ENSMMNG00015013035) TRDMT1 (ENSMMNG00015013057) CUBN (ENSMMNG00015013087) RSU1 (ENSMMNG00015013159) C1QL3 (ENSMMNG00015013175) ENSMMNG00015013183 ENSMMNG00015013192 MINDY3 (ENSMMNG00015013207) ITGA8 (ENSMMNG00015013242) FAM171A1 (ENSMMNG00015013263) NMT2 (ENSMMNG00015013282) RPP38 (ENSMMNG00015013300) ENSMMNG00015013306 DCLRE1C (ENSMMNG00015013334) Vaquita MODERN SPECIES 11 MTPAP (ENSPSNG00000002929) JCAD (ENSPSNG00000002960) SVIL (ENSPSNG00000002977) ZNF438 (ENSPSNG00000003063) ZEB1 (ENSPSNG00000003104) ARHGAP12 (ENSPSNG00000003162) KIF5B (ENSPSNG00000003253) EPC1 (ENSPSNG00000003323) NSUN6 (ENSPSNG00000003360) ENSPSNG00000003389 CACNB2 (ENSPSNG00000003719) SLC39A12 (ENSPSNG00000004280) MRC1 (ENSPSNG00000004387) TMEM236 (ENSPSNG00000004445) ENSPSNG00000004467 HACD1 (ENSPSNG00000004481) ##22 ST8SIA6 (ENSPSNG00000004511) VIM (ENSPSNG00000004537) TRDMT1 (ENSPSNG00000004562) CUBN (ENSPSNG00000004912) RSU1 (ENSPSNG00000005571) C1QL3 (ENSPSNG00000005594) PTER (ENSPSNG00000005612) ENSPSNG00000005635 ENSPSNG00000005647 MINDY3 (ENSPSNG00000005759) ITGA8 (ENSPSNG00000005830) FAM171A1 (ENSPSNG00000005876) NMT2 (ENSPSNG00000005915) RPP38 (ENSPSNG00000005956) ACBD7 (ENSPSNG00000005978) Dolphin MODERN SPECIES 1626 HACD1 (ENSTTRG00000000438) ##22 ST8SIA6 (ENSTTRG00000000437) VIM (ENSTTRG00000000436) TRDMT1 (ENSTTRG00000000435) CUBN (ENSTTRG00000000434) RSU1 (ENSTTRG00000000433) PTER (ENSTTRG00000000431) Sperm whale MODERN SPECIES 2 MAP3K8 (ENSPCTG00005003148) MTPAP (ENSPCTG00005003161) ENSPCTG00005003187 SVIL (ENSPCTG00005003220) ZNF438 (ENSPCTG00005003363) ZEB1 (ENSPCTG00005003401) ARHGAP12 (ENSPCTG00005003454) KIF5B (ENSPCTG00005003538) EPC1 (ENSPCTG00005003600) NSUN6 (ENSPCTG00005003659) CACNB2 (ENSPCTG00005003907) MRC1 (ENSPCTG00005007442) MRC1 (ENSPCTG00005007647) TMEM236 (ENSPCTG00005007727) ENSPCTG00005007748 HACD1 (ENSPCTG00005007805) ##22 ST8SIA6 (ENSPCTG00005007834) VIM (ENSPCTG00005007862) TRDMT1 (ENSPCTG00005007915) CUBN (ENSPCTG00005008099) RSU1 (ENSPCTG00005008293) C1QL3 (ENSPCTG00005008375) PTER (ENSPCTG00005008393) ENSPCTG00005008421 ENSPCTG00005008430 MINDY3 (ENSPCTG00005008453) ENSPCTG00005008508 ITGA8 (ENSPCTG00005008616) FAM171A1 (ENSPCTG00005009241) NMT2 (ENSPCTG00005009303) RPP38 (ENSPCTG00005009429) Blue whale MODERN SPECIES 11 MAP3K8 (ENSBMSG00010005314) MTPAP (ENSBMSG00010005337) JCAD (ENSBMSG00010005345) SVIL (ENSBMSG00010005405) ZNF438 (ENSBMSG00010005812) ZEB1 (ENSBMSG00010005862) ENSBMSG00010005938 KIF5B (ENSBMSG00010006140) EPC1 (ENSBMSG00010006327) NSUN6 (ENSBMSG00010000003) CACNB2 (ENSBMSG00010000242) SLC39A12 (ENSBMSG00010002610) MRC1 (ENSBMSG00010002635) TMEM236 (ENSBMSG00010002660) ENSBMSG00010002668 HACD1 (ENSBMSG00010002679) ##22 ST8SIA6 (ENSBMSG00010002690) ENSBMSG00010002705 VIM (ENSBMSG00010002717) TRDMT1 (ENSBMSG00010002733) ENSBMSG00010002741 CUBN (ENSBMSG00010002764) RSU1 (ENSBMSG00010002802) C1QL3 (ENSBMSG00010002809) PTER (ENSBMSG00010002813) ENSBMSG00010002821 MINDY3 (ENSBMSG00010002834) ENSBMSG00010002872 ITGA8 (ENSBMSG00010002882) FAM171A1 (ENSBMSG00010002911) NMT2 (ENSBMSG00010002922) Camelidae ANCESTRAL SPECIES 114 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 Arabian camel MODERN SPECIES 28 ACBD5 (ENSCDRG00005011208) ABI1 (ENSCDRG00005010036) PDSS1 (ENSCDRG00005009781) APBB1IP (ENSCDRG00005009629) GAD2 (ENSCDRG00005009327) ENSCDRG00005009271 ENSCDRG00005009230 MYO3A (ENSCDRG00005008724) ENSCDRG00005008660 ENSCDRG00005008599 GPR158 (ENSCDRG00005008574) ENSCDRG00005008514 MRC1 (ENSCDRG00005008354) TMEM236 (ENSCDRG00005008298) STAM (ENSCDRG00005008211) HACD1 (ENSCDRG00005008055) ##22 ENSCDRG00005008009 ENSCDRG00005007947 ENSCDRG00005007874 ST8SIA6 (ENSCDRG00005007771) ENSCDRG00005007745 ENSCDRG00005007725 VIM (ENSCDRG00005007671) TRDMT1 (ENSCDRG00005007609) ENSCDRG00005007562 CUBN (ENSCDRG00005007309) RSU1 (ENSCDRG00005007242) ENSCDRG00005007223 ENSCDRG00005007204 PTER (ENSCDRG00005007184) ENSCDRG00005007134 Alpaca MODERN SPECIES 1675 ENSVPAG00000001973 ##22 Laurasiatheria_b ANCESTRAL SPECIES 22 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00410000028701 ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000165398 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Laurasiatheria_c ANCESTRAL SPECIES 27 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Chiroptera ANCESTRAL SPECIES 55 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Microchiroptera ANCESTRAL SPECIES 50 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Greater horseshoe bat MODERN SPECIES 30 MLLT10 (ENSRFEG00010008217) SKIDA1 (ENSRFEG00010008117) ENSRFEG00010007971 NEBL (ENSRFEG00010007581) ENSRFEG00010007544 ENSRFEG00010007528 PLXDC2 (ENSRFEG00010007490) MALRD1 (ENSRFEG00010007438) ARL5B (ENSRFEG00010007388) NSUN6 (ENSRFEG00010007349) CACNB2 (ENSRFEG00010006472) SLC39A12 (ENSRFEG00010005999) MRC1 (ENSRFEG00010021400) TMEM236 (ENSRFEG00010021386) STAM (ENSRFEG00010021374) HACD1 (ENSRFEG00010021363) ##22 ST8SIA6 (ENSRFEG00010021356) VIM (ENSRFEG00010021345) ENSRFEG00010021330 TRDMT1 (ENSRFEG00010021313) CUBN (ENSRFEG00010020510) RSU1 (ENSRFEG00010020311) C1QL3 (ENSRFEG00010020295) PTER (ENSRFEG00010020253) ENSRFEG00010020221 MINDY3 (ENSRFEG00010020170) ITGA8 (ENSRFEG00010019917) FAM171A1 (ENSRFEG00010019859) NMT2 (ENSRFEG00010019775) RPP38 (ENSRFEG00010019749) ACBD7 (ENSRFEG00010019720) Microbat MODERN SPECIES 1058 ENSMLUG00000001285 ENSMLUG00000024250 ENSMLUG00000024489 ENSMLUG00000028069 ARL5B (ENSMLUG00000001833) NSUN6 (ENSMLUG00000001824) ENSMLUG00000022890 CACNB2 (ENSMLUG00000001818) SLC39A12 (ENSMLUG00000007079) MRC1 (ENSMLUG00000009142) TMEM236 (ENSMLUG00000026911) STAM (ENSMLUG00000017515) HACD1 (ENSMLUG00000026226) ##22 ST8SIA6 (ENSMLUG00000013878) VIM (ENSMLUG00000016103) TRDMT1 (ENSMLUG00000012351) CUBN (ENSMLUG00000016887) RSU1 (ENSMLUG00000016880) C1QL3 (ENSMLUG00000024192) PTER (ENSMLUG00000016875) ENSMLUG00000029986 ENSMLUG00000000669 ENSMLUG00000028800 Megabat MODERN SPECIES 3912 TMEM236 (ENSPVAG00000016326) STAM (ENSPVAG00000016325) HACD1 (ENSPVAG00000016322) ##22 ENSPVAG00000016321 ST8SIA6 (ENSPVAG00000016319) VIM (ENSPVAG00000016316) TRDMT1 (ENSPVAG00000016312) Equus ANCESTRAL SPECIES 44 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Donkey MODERN SPECIES 21 BMI1 (ENSEASG00005006972) ENSEASG00005006975 DNAJC1 (ENSEASG00005006990) MLLT10 (ENSEASG00005031964) SKIDA1 (ENSEASG00005019976) NEBL (ENSEASG00005019970) PLXDC2 (ENSEASG00005019962) MALRD1 (ENSEASG00005019949) ARL5B (ENSEASG00005030385) NSUN6 (ENSEASG00005019939) CACNB2 (ENSEASG00005019932) SLC39A12 (ENSEASG00005019922) MRC1 (ENSEASG00005019872) TMEM236 (ENSEASG00005029134) STAM (ENSEASG00005019841) HACD1 (ENSEASG00005019837) ##22 ST8SIA6 (ENSEASG00005019834) VIM (ENSEASG00005019833) CUBN (ENSEASG00005019821) RSU1 (ENSEASG00005019814) C1QL3 (ENSEASG00005019813) PTER (ENSEASG00005019810) MINDY3 (ENSEASG00005019806) ITGA8 (ENSEASG00005019797) FAM171A1 (ENSEASG00005035873) NMT2 (ENSEASG00005019784) RPP38 (ENSEASG00005019783) ACBD7 (ENSEASG00005019782) OLAH (ENSEASG00005019781) ENSEASG00005027148 DCLRE1C (ENSEASG00005019427) Horse MODERN SPECIES 21 MLLT10 (ENSECAG00000012723) ENSECAG00000054209 ENSECAG00000050062 SKIDA1 (ENSECAG00000004192) NEBL (ENSECAG00000038375) PLXDC2 (ENSECAG00000017520) MALRD1 (ENSECAG00000007484) ARL5B (ENSECAG00000009195) NSUN6 (ENSECAG00000009221) ENSECAG00000051372 CACNB2 (ENSECAG00000013884) SLC39A12 (ENSECAG00000000525) MRC1 (ENSECAG00000010728) TMEM236 (ENSECAG00000057680) STAM (ENSECAG00000019963) HACD1 (ENSECAG00000020223) ##22 ST8SIA6 (ENSECAG00000002674) TRDMT1 (ENSECAG00000013644) VIM (ENSECAG00000004216) CUBN (ENSECAG00000016638) RSU1 (ENSECAG00000017242) ENSECAG00000039587 PTER (ENSECAG00000000081) MINDY3 (ENSECAG00000000469) ITGA8 (ENSECAG00000012863) FAM171A1 (ENSECAG00000016066) NMT2 (ENSECAG00000010704) RPP38 (ENSECAG00000004371) ACBD7 (ENSECAG00000031970) OLAH (ENSECAG00000020065) MEIG1 (ENSECAG00000038073) Carnivora ANCESTRAL SPECIES 26 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00410000028701 ENSGT00940000156390 ENSGT00940000154775.c.b.a ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000165398 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000013550 ENSGT00940000157779 Caniformia ANCESTRAL SPECIES 30 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000165398 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000013550 ENSGT00940000157779 Canidae ANCESTRAL SPECIES 29 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT01090000260046.e.b ENSGT01050000244818.t.c.a.b.a.b.a.b ENSGT00390000010799.u.b.a.a.b ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 Canis_lupus ANCESTRAL SPECIES 6 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00390000012652.bb ENSGT00940000155299.A ENSGT00390000018086.z.j.b.b ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT01090000260046.e.b.b.a.b.a.a.b.b.a.a.b ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 Dog MODERN SPECIES 11 ENSCAFG00845012328 RAB18 (ENSCAFG00845012414) ENSCAFG00845012530 ENSCAFG00845012582 ENSCAFG00845012663 ENSCAFG00845012772 ENSCAFG00845012903 ENSCAFG00845013043 ARL5B (ENSCAFG00845013096) NSUN6 (ENSCAFG00845013130) CACNB2 (ENSCAFG00845013285) SLC39A12 (ENSCAFG00845013563) MRC1 (ENSCAFG00845013649) TMEM236 (ENSCAFG00845013735) STAM (ENSCAFG00845013763) HACD1 (ENSCAFG00845013804) ##22 ST8SIA6 (ENSCAFG00845013846) VIM (ENSCAFG00845013892) TRDMT1 (ENSCAFG00845013955) ENSCAFG00845014012 CUBN (ENSCAFG00845014048) RSU1 (ENSCAFG00845014116) ENSCAFG00845014156 C1QL3 (ENSCAFG00845014169) PTER (ENSCAFG00845014206) MINDY3 (ENSCAFG00845014335) ITGA8 (ENSCAFG00845014426) FAM171A1 (ENSCAFG00845014555) NMT2 (ENSCAFG00845014591) RPP38 (ENSCAFG00845014645) ACBD7 (ENSCAFG00845014667) Dingo MODERN SPECIES 98 ARL5B (ENSCAFG00020012127) NSUN6 (ENSCAFG00020012116) CACNB2 (ENSCAFG00020009860) ENSCAFG00020009727 SLC39A12 (ENSCAFG00020009626) MRC1 (ENSCAFG00020009231) TMEM236 (ENSCAFG00020009196) STAM (ENSCAFG00020008842) HACD1 (ENSCAFG00020008798) ##22 ST8SIA6 (ENSCAFG00020008765) VIM (ENSCAFG00020008570) TRDMT1 (ENSCAFG00020008452) ENSCAFG00020008447 CUBN (ENSCAFG00020008405) ENSCAFG00020008395 RSU1 (ENSCAFG00020008354) C1QL3 (ENSCAFG00020008337) PTER (ENSCAFG00020008331) ENSCAFG00020008322 MINDY3 (ENSCAFG00020008196) ITGA8 (ENSCAFG00020008104) FAM171A1 (ENSCAFG00020008035) NMT2 (ENSCAFG00020008012) RPP38 (ENSCAFG00020008008) Red fox MODERN SPECIES 4 ARL5B (ENSVVUG00000003807) NSUN6 (ENSVVUG00000003814) CACNB2 (ENSVVUG00000003840) SLC39A12 (ENSVVUG00000003879) MRC1 (ENSVVUG00000003909) TMEM236 (ENSVVUG00000003981) STAM (ENSVVUG00000003992) HACD1 (ENSVVUG00000004032) ##22 ST8SIA6 (ENSVVUG00000004076) VIM (ENSVVUG00000004108) TRDMT1 (ENSVVUG00000004303) ENSVVUG00000004313 CUBN (ENSVVUG00000004372) ENSVVUG00000004982 RSU1 (ENSVVUG00000004989) ENSVVUG00000004992 C1QL3 (ENSVVUG00000004998) PTER (ENSVVUG00000005003) MINDY3 (ENSVVUG00000005044) ITGA8 (ENSVVUG00000005073) FAM171A1 (ENSVVUG00000005186) NMT2 (ENSVVUG00000005248) RPP38 (ENSVVUG00000005272) Caniformia_b ANCESTRAL SPECIES 33 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000165398 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000013550 ENSGT00940000157779 Ursidae ANCESTRAL SPECIES 46 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000013550.a ENSGT00940000157779 Ursus ANCESTRAL SPECIES 132 ENSGT00900000141099 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000013550.a ENSGT00940000157779 Polar bear MODERN SPECIES 175 DNAJC1 (ENSUMAG00000013528) ENSUMAG00000013492 ENSUMAG00000013488 ENSUMAG00000013480 NEBL (ENSUMAG00000013437) ENSUMAG00000013432 PLXDC2 (ENSUMAG00000013418) MALRD1 (ENSUMAG00000013394) ARL5B (ENSUMAG00000013390) NSUN6 (ENSUMAG00000013383) CACNB2 (ENSUMAG00000013283) SLC39A12 (ENSUMAG00000013212) MRC1 (ENSUMAG00000012786) TMEM236 (ENSUMAG00000012726) STAM (ENSUMAG00000012719) HACD1 (ENSUMAG00000012713) ##22 ST8SIA6 (ENSUMAG00000012695) VIM (ENSUMAG00000012639) TRDMT1 (ENSUMAG00000012633) CUBN (ENSUMAG00000012581) RSU1 (ENSUMAG00000012571) PTER (ENSUMAG00000012564) ENSUMAG00000012551 ENSUMAG00000012547 ITGA8 (ENSUMAG00000012429) FAM171A1 (ENSUMAG00000012393) NMT2 (ENSUMAG00000012383) RPP38 (ENSUMAG00000012382) ACBD7 (ENSUMAG00000012381) ENSUMAG00000012377 DCLRE1C (ENSUMAG00000012372) American black bear MODERN SPECIES 5531 ENSUAMG00000019180 ENSUAMG00000019184 ##22 Giant Panda MODERN SPECIES 6 SPAG6 (ENSAMEG00000006244) BMI1 (ENSAMEG00000006200) DNAJC1 (ENSAMEG00000006177) MLLT10 (ENSAMEG00000006118) SKIDA1 (ENSAMEG00000006113) NEBL (ENSAMEG00000006071) PLXDC2 (ENSAMEG00000006060) MALRD1 (ENSAMEG00000027613) ARL5B (ENSAMEG00000012973) NSUN6 (ENSAMEG00000012963) CACNB2 (ENSAMEG00000012933) SLC39A12 (ENSAMEG00000001380) MRC1 (ENSAMEG00000010695) TMEM236 (ENSAMEG00000027453) STAM (ENSAMEG00000010626) HACD1 (ENSAMEG00000010611) ##22 ST8SIA6 (ENSAMEG00000010589) ENSAMEG00000010536 CUBN (ENSAMEG00000010368) RSU1 (ENSAMEG00000010365) C1QL3 (ENSAMEG00000023523) PTER (ENSAMEG00000010360) MINDY3 (ENSAMEG00000002689) ITGA8 (ENSAMEG00000002860) FAM171A1 (ENSAMEG00000003058) NMT2 (ENSAMEG00000003078) RPP38 (ENSAMEG00000018832) ACBD7 (ENSAMEG00000030982) ENSAMEG00000030572 DCLRE1C (ENSAMEG00000011546) SUV39H2 (ENSAMEG00000011527) Mustelinae ANCESTRAL SPECIES 83 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000165398 ENSGT00940000157567 ENSGT01000000214434.B.b.e.a.d ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00390000013550 ENSGT00940000157779 ENSGT00940000156788 American mink MODERN SPECIES 48 COMMD3 (ENSNVIG00000003002) DNAJC1 (ENSNVIG00000002978) MLLT10 (ENSNVIG00000002870) SKIDA1 (ENSNVIG00000002861) NEBL (ENSNVIG00000002762) PLXDC2 (ENSNVIG00000002665) MALRD1 (ENSNVIG00000002593) ARL5B (ENSNVIG00000002552) ENSNVIG00000002542 NSUN6 (ENSNVIG00000002517) CACNB2 (ENSNVIG00000002329) S39AC (ENSNVIG00000002193) MRC1 (ENSNVIG00000002066) TMEM236 (ENSNVIG00000002050) STAM (ENSNVIG00000002021) HACD1 (ENSNVIG00000001945) ##22 ST8SIA6 (ENSNVIG00000001899) VIM (ENSNVIG00000001870) TRDMT (ENSNVIG00000001840) CUBN (ENSNVIG00000001728) RSU1 (ENSNVIG00000001667) C1QL3 (ENSNVIG00000001662) PTER (ENSNVIG00000001618) MINDY3 (ENSNVIG00000001573) ITGA8 (ENSNVIG00000001495) FAM171A1 (ENSNVIG00000001479) NMT2 (ENSNVIG00000001413) RPP38 (ENSNVIG00000001400) Ferret MODERN SPECIES 220 SKIDA1 (ENSMPUG00000012031) NEBL (ENSMPUG00000011945) PLXDC2 (ENSMPUG00000011936) MALRD1 (ENSMPUG00000011920) ENSMPUG00000011915 ENSMPUG00000011908 ARL5B (ENSMPUG00000011906) ENSMPUG00000011904 NSUN6 (ENSMPUG00000011900) CACNB2 (ENSMPUG00000011897) SLC39A12 (ENSMPUG00000011888) MRC1 (ENSMPUG00000011716) ENSMPUG00000011706 ENSMPUG00000011701 STAM (ENSMPUG00000011635) HACD1 (ENSMPUG00000011613) ##22 ST8SIA6 (ENSMPUG00000011607) VIM (ENSMPUG00000011602) TRDMT1 (ENSMPUG00000011532) CUBN (ENSMPUG00000011521) RSU1 (ENSMPUG00000011518) C1QL3 (ENSMPUG00000011515) PTER (ENSMPUG00000011511) MINDY3 (ENSMPUG00000011496) ENSMPUG00000011484 ITGA8 (ENSMPUG00000011474) Felidae ANCESTRAL SPECIES 2 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028701 ENSGT00940000156390.ub ENSGT00940000154775.c.b.a ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00990000213600 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000013550 Panthera ANCESTRAL SPECIES ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028701 ENSGT00940000156390.ub ENSGT00940000154775.c.b.a ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00990000213600 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000013550 Tiger MODERN SPECIES 159 MLLT10 (ENSPTIG00000006988) SKIDA1 (ENSPTIG00000006561) ENSPTIG00000005930 ENSPTIG00000000483 ENSPTIG00000021686 ENSPTIG00000021442 PLXDC2 (ENSPTIG00000017182) MALRD1 (ENSPTIG00000012799) ARL5B (ENSPTIG00000011231) NSUN6 (ENSPTIG00000010890) CACNB2 (ENSPTIG00000018789) SLC39A12 (ENSPTIG00000015896) MRC1 (ENSPTIG00000014607) TMEM236 (ENSPTIG00000014012) STAM (ENSPTIG00000013414) HACD1 (ENSPTIG00000012113) ##22 ENSPTIG00000005494 ST8SIA6 (ENSPTIG00000002001) ENSPTIG00000022004 TRDMT1 (ENSPTIG00000021744) CUBN (ENSPTIG00000015843) RSU1 (ENSPTIG00000013354) ENSPTIG00000013098 PTER (ENSPTIG00000011822) MINDY3 (ENSPTIG00000009038) ITGA8 (ENSPTIG00000001922) FAM171A1 (ENSPTIG00000020819) NMT2 (ENSPTIG00000018118) RPP38 (ENSPTIG00000007188) ACBD7 (ENSPTIG00000017412) MEIG1 (ENSPTIG00000017114) Panthera_a ANCESTRAL SPECIES 5 ENSGT01030000235784 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028701 ENSGT00940000156390.ub ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00990000213600 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000013550 leopard MODERN SPECIES 36 ENSPPRG00000016289 DNAJC1 (ENSPPRG00000000230) MLLT10 (ENSPPRG00000022595) SKIDA1 (ENSPPRG00000013819) NEBL (ENSPPRG00000013325) ENSPPRG00000011944 PLXDC2 (ENSPPRG00000011789) MALRD1 (ENSPPRG00000008845) ARL5B (ENSPPRG00000007093) NSUN6 (ENSPPRG00000007015) CACNB2 (ENSPPRG00000004882) SLC39A12 (ENSPPRG00000002119) MRC1 (ENSPPRG00000001729) TMEM236 (ENSPPRG00000001033) STAM (ENSPPRG00000000934) HACD1 (ENSPPRG00000000769) ##22 ST8SIA6 (ENSPPRG00000000481) ENSPPRG00000020240 VIM (ENSPPRG00000016204) TRDMT1 (ENSPPRG00000013304) CUBN (ENSPPRG00000012777) RSU1 (ENSPPRG00000012033) C1QL3 (ENSPPRG00000011876) PTER (ENSPPRG00000010566) MINDY3 (ENSPPRG00000009362) ITGA8 (ENSPPRG00000008787) FAM171A1 (ENSPPRG00000008132) NMT2 (ENSPPRG00000008005) RPP38 (ENSPPRG00000015329) ACBD7 (ENSPPRG00000006482) DCLRE1C (ENSPPRG00000006079) lion MODERN SPECIES 7 ENSPLOG00000020155 DNAJC1 (ENSPLOG00000020079) ENSPLOG00000020055 MLLT10 (ENSPLOG00000019456) SKIDA1 (ENSPLOG00000019276) NEBL (ENSPLOG00000019064) PLXDC2 (ENSPLOG00000018894) MALRD1 (ENSPLOG00000018543) ARL5B (ENSPLOG00000018474) NSUN6 (ENSPLOG00000018389) CACNB2 (ENSPLOG00000016334) SLC39A12 (ENSPLOG00000015305) MRC1 (ENSPLOG00000014946) TMEM236 (ENSPLOG00000014847) STAM (ENSPLOG00000014747) HACD1 (ENSPLOG00000014677) ##22 ST8SIA6 (ENSPLOG00000014567) VIM (ENSPLOG00000014474) TRDMT1 (ENSPLOG00000014346) CUBN (ENSPLOG00000013698) RSU1 (ENSPLOG00000013518) C1QL3 (ENSPLOG00000013472) PTER (ENSPLOG00000013380) ENSPLOG00000013349 MINDY3 (ENSPLOG00000013251) ITGA8 (ENSPLOG00000012932) FAM171A1 (ENSPLOG00000012800) NMT2 (ENSPLOG00000012739) RPP38 (ENSPLOG00000012699) ACBD7 (ENSPLOG00000012647) MEIG1 (ENSPLOG00000012585) Cat MODERN SPECIES 238 ENSFCAG00000040895 DNAJC1 (ENSFCAG00000034871) MLLT10 (ENSFCAG00000018749) SKIDA1 (ENSFCAG00000045706) ENSFCAG00000053758 NEBL (ENSFCAG00000010827) PLXDC2 (ENSFCAG00000010826) MALRD1 (ENSFCAG00000039642) ARL5B (ENSFCAG00000015495) NSUN6 (ENSFCAG00000015494) CACNB2 (ENSFCAG00000015492) SLC39A12 (ENSFCAG00000015489) MRC1 (ENSFCAG00000031929) TMEM236 (ENSFCAG00000008360) STAM (ENSFCAG00000024059) HACD1 (ENSFCAG00000014221) ##22 ST8SIA6 (ENSFCAG00000035629) VIM (ENSFCAG00000046228) TRDMT1 (ENSFCAG00000035007) CUBN (ENSFCAG00000013560) RSU1 (ENSFCAG00000013559) C1QL3 (ENSFCAG00000043670) PTER (ENSFCAG00000013558) ENSFCAG00000046902 MINDY3 (ENSFCAG00000031294) ITGA8 (ENSFCAG00000002252) FAM171A1 (ENSFCAG00000011612) NMT2 (ENSFCAG00000005147) RPP38 (ENSFCAG00000022449) ACBD7 (ENSFCAG00000027337) MEIG1 (ENSFCAG00000022479) Eulipotyphla ANCESTRAL SPECIES ENSGT00530000062962.a.b ##22 Hedgehog MODERN SPECIES 6036 HACD1 (ENSEEUG00000008397) ##22 Common shrew MODERN SPECIES 8347 HACD1 (ENSSARG00000014490) ##22 Euarchontoglires ANCESTRAL SPECIES 23 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00940000172425 ENSGT00410000028701 ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Euarchontoglires_A ANCESTRAL SPECIES 27 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Tree shrew MODERN SPECIES 3377 HACD1 (ENSTBEG00000017313) ##22 Glires ANCESTRAL SPECIES 28 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Lagomorpha ANCESTRAL SPECIES 115 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00960000190284 ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT01090000260046.l ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518.b Rabbit MODERN SPECIES 7 ENSOCUG00000032979 MLLT10 (ENSOCUG00000006040) SKIDA1 (ENSOCUG00000027908) NEBL (ENSOCUG00000012207) PLXDC2 (ENSOCUG00000014482) ENSOCUG00000032011 MALRD1 (ENSOCUG00000015999) ENSOCUG00000039393 ARL5B (ENSOCUG00000014876) NSUN6 (ENSOCUG00000014870) CACNB2 (ENSOCUG00000014849) SLC39A12 (ENSOCUG00000014837) MRC1 (ENSOCUG00000003247) TMEM236 (ENSOCUG00000003239) STAM (ENSOCUG00000003771) HACD1 (ENSOCUG00000005702) ##22 ST8SIA6 (ENSOCUG00000007240) VIM (ENSOCUG00000009222) TRDMT1 (ENSOCUG00000007235) CUBN (ENSOCUG00000029667) RSU1 (ENSOCUG00000030399) C1QL3 (ENSOCUG00000001991) PTER (ENSOCUG00000001985) ENSOCUG00000038864 MINDY3 (ENSOCUG00000016579) ITGA8 (ENSOCUG00000014334) FAM171A1 (ENSOCUG00000006924) NMT2 (ENSOCUG00000017607) ENSOCUG00000034897 ENSOCUG00000022768 ENSOCUG00000032177 Pika MODERN SPECIES 2092 STAM (ENSOPRG00000002091) HACD1 (ENSOPRG00000002084) ##22 ST8SIA6 (ENSOPRG00000002053) Rodentia ANCESTRAL SPECIES 24 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Rodentia_A ANCESTRAL SPECIES 25 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Hystricomorpha ANCESTRAL SPECIES 48 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT01030000234553.b.b.d.c.b.b ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 Naked mole-rat female MODERN SPECIES 27 MLLT10 (ENSHGLG00000004757) ENSHGLG00000043040 SKIDA1 (ENSHGLG00000005858) ENSHGLG00000006963 ENSHGLG00000035788 ENSHGLG00000008921 ENSHGLG00000004709 MALRD1 (ENSHGLG00000004928) ENSHGLG00000020443 ARL5B (ENSHGLG00000007428) NSUN6 (ENSHGLG00000008085) CACNB2 (ENSHGLG00000009093) SLC39A12 (ENSHGLG00000004349) MRC1 (ENSHGLG00000004480) STAM (ENSHGLG00000005690) HACD1 (ENSHGLG00000036422) ##22 ST8SIA6 (ENSHGLG00000007752) Vim (ENSHGLG00000008081) TRDMT1 (ENSHGLG00000004178) CUBN (ENSHGLG00000004428) RSU1 (ENSHGLG00000007044) C1QL3 (ENSHGLG00000043979) PTER (ENSHGLG00000038711) MINDY3 (ENSHGLG00000009019) ENSHGLG00000005190 ENSHGLG00000034057 ENSHGLG00000033153 ENSHGLG00000032877 ENSHGLG00000047988 ENSHGLG00000006325 FBLN2 (ENSHGLG00000007070) Hystricomorpha_a ANCESTRAL SPECIES 6 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000161980 Guinea pig MODERN SPECIES 120 ENSCPOG00000033524 COPG1 (ENSCPOG00000000894) CNBP (ENSCPOG00000032294) ISY1 (ENSCPOG00000014735) RAB43 (ENSCPOG00000025593) Cacnb2 (ENSCPOG00000005845) SLC39A12 (ENSCPOG00000013668) MRC1 (ENSCPOG00000006215) TMEM236 (ENSCPOG00000000583) STAM (ENSCPOG00000009262) HACD1 (ENSCPOG00000009260) ##22 ST8SIA6 (ENSCPOG00000014843) VIM (ENSCPOG00000001054) TRDMT1 (ENSCPOG00000001052) CUBN (ENSCPOG00000007119) RSU1 (ENSCPOG00000007112) C1QL3 (ENSCPOG00000003283) PTER (ENSCPOG00000036817) ENSCPOG00000038371 MINDY3 (ENSCPOG00000013102) ITGA8 (ENSCPOG00000009752) Hystricomorpha_b ANCESTRAL SPECIES 2 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00940000158523 ENSGT00940000156047 ENSGT00940000156308 ENSGT00390000009491.d ENSGT00940000156915 ENSGT00940000161980 Degu MODERN SPECIES 261 ENSODEG00000014860 ENSODEG00000019926 ARL5B (ENSODEG00000013924) NSUN6 (ENSODEG00000010093) ENSODEG00000011487 CACNB2 (ENSODEG00000009971) SLC39A12 (ENSODEG00000010075) MRC1 (ENSODEG00000010406) TMEM236 (ENSODEG00000013808) ENSODEG00000010216 HACD1 (ENSODEG00000012161) ##22 ST8SIA6 (ENSODEG00000010495) ENSODEG00000011037 ENSODEG00000009896 ENSODEG00000009660 CUBN (ENSODEG00000010405) RSU1 (ENSODEG00000009946) C1QL3 (ENSODEG00000010477) PTER (ENSODEG00000010317) ENSODEG00000010031 ENSODEG00000010619 ITGA8 (ENSODEG00000010828) Long-tailed chinchilla MODERN SPECIES 136 ENSCLAG00000013918 COMMD3 (ENSCLAG00000004946) DNAJC1 (ENSCLAG00000006988) MLLT10 (ENSCLAG00000011519) SKIDA1 (ENSCLAG00000006225) NEBL (ENSCLAG00000008890) PLXDC2 (ENSCLAG00000006978) MALRD1 (ENSCLAG00000005010) ARL5B (ENSCLAG00000007016) NSUN6 (ENSCLAG00000008092) CACNB2 (ENSCLAG00000012002) SLC39A12 (ENSCLAG00000015075) MRC1 (ENSCLAG00000007455) TMEM236 (ENSCLAG00000012316) STAM (ENSCLAG00000004624) HACD1 (ENSCLAG00000005790) ##22 ST8SIA6 (ENSCLAG00000006591) VIM (ENSCLAG00000005727) TRDMT1 (ENSCLAG00000004458) CUBN (ENSCLAG00000007726) RSU1 (ENSCLAG00000015716) C1QL3 (ENSCLAG00000017284) PTER (ENSCLAG00000013761) MINDY3 (ENSCLAG00000012882) ITGA8 (ENSCLAG00000012934) WNT7A (ENSCLAG00000007946) FBLN2 (ENSCLAG00000011332) HDAC11 (ENSCLAG00000009712) NUP210 (ENSCLAG00000014516) IQSEC1 (ENSCLAG00000011204) ENSCLAG00000007705 Sciuridae ANCESTRAL SPECIES ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00950000182767.b.b.d.s ENSGT00940000161191.A Eurasian red squirrel MODERN SPECIES 3 ENSSVLG00005014330 ENSSVLG00005014360 NEBL (ENSSVLG00005014393) ENSSVLG00005014900 PLXDC2 (ENSSVLG00005014950) MALRD1 (ENSSVLG00005015064) ENSSVLG00005015431 ARL5B (ENSSVLG00005015443) NSUN6 (ENSSVLG00005015513) CACNB2 (ENSSVLG00005016044) ENSSVLG00005017976 SLC39A12 (ENSSVLG00005018060) MRC1 (ENSSVLG00005018559) TMEM236 (ENSSVLG00005018833) STAM (ENSSVLG00005018888) HACD1 (ENSSVLG00005018935) ##22 ST8SIA6 (ENSSVLG00005018993) VIM (ENSSVLG00005019093) ENSSVLG00005019235 CUBN (ENSSVLG00005019545) RSU1 (ENSSVLG00005020026) C1QL3 (ENSSVLG00005020062) PTER (ENSSVLG00005020112) MINDY3 (ENSSVLG00005020197) ITGA8 (ENSSVLG00005020274) FAM171A1 (ENSSVLG00005020324) NMT2 (ENSSVLG00005020361) RPP38 (ENSSVLG00005020433) ACBD7 (ENSSVLG00005020458) ENSSVLG00005020500 NTPCR (ENSSVLG00005020544) Marmotini ANCESTRAL SPECIES 21 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT00940000168450 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00940000170822 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 Alpin marmot MODERN SPECIES 12 ENSMMMG00000014634 ARL5B (ENSMMMG00000014672) NSUN6 (ENSMMMG00000014693) CACNB2 (ENSMMMG00000014703) SLC39A12 (ENSMMMG00000014822) MRC1 (ENSMMMG00000014985) TMEM236 (ENSMMMG00000015019) STAM (ENSMMMG00000015027) HACD1 (ENSMMMG00000015083) ##22 ENSMMMG00000015094 ST8SIA6 (ENSMMMG00000015098) VIM (ENSMMMG00000015119) ENSMMMG00000015138 CUBN (ENSMMMG00000015164) RSU1 (ENSMMMG00000015215) C1QL3 (ENSMMMG00000015248) PTER (ENSMMMG00000015254) MINDY3 (ENSMMMG00000015272) ITGA8 (ENSMMMG00000015293) FAM171A1 (ENSMMMG00000015323) NMT2 (ENSMMMG00000015331) ENSMMMG00000015374 ENSMMMG00000015376 ACBD7 (ENSMMMG00000015380) Marmotini_b ANCESTRAL SPECIES 15 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT00940000168450 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00950000182767.b.b.d.s Arctic ground squirrel MODERN SPECIES 368 ENSUPAG00010006517 ARL5B (ENSUPAG00010006529) NSUN6 (ENSUPAG00010006540) CACNB2 (ENSUPAG00010006575) SLC39A12 (ENSUPAG00010006668) MRC1 (ENSUPAG00010006954) TMEM236 (ENSUPAG00010006978) STAM (ENSUPAG00010006991) HACD1 (ENSUPAG00010007011) ##22 ENSUPAG00010007045 ST8SIA6 (ENSUPAG00010007049) Squirrel MODERN SPECIES 120 COMMD3 (ENSSTOG00000001638) DNAJC1 (ENSSTOG00000002303) MLLT10 (ENSSTOG00000016486) SKIDA1 (ENSSTOG00000005865) NEBL (ENSSTOG00000020521) PLXDC2 (ENSSTOG00000005048) MALRD1 (ENSSTOG00000034625) ARL5B (ENSSTOG00000027859) NSUN6 (ENSSTOG00000004317) CACNB2 (ENSSTOG00000004300) SLC39A12 (ENSSTOG00000014809) MRC1 (ENSSTOG00000005205) TMEM236 (ENSSTOG00000000192) STAM (ENSSTOG00000021902) ENSSTOG00000020280 HACD1 (ENSSTOG00000020424) ##22 ENSSTOG00000034590 ST8SIA6 (ENSSTOG00000013711) VIM (ENSSTOG00000022289) CUBN (ENSSTOG00000029820) RSU1 (ENSSTOG00000022646) C1QL3 (ENSSTOG00000027778) PTER (ENSSTOG00000021437) Rodentia_B ANCESTRAL SPECIES 32 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Kangaroo rat MODERN SPECIES 343 Mllt10 (ENSDORG00000005045) Skida1 (ENSDORG00000026721) ENSDORG00000006912 ENSDORG00000001203 ENSDORG00000014081 ENSDORG00000025971 Plxdc2 (ENSDORG00000005916) Malrd1 (ENSDORG00000027882) Arl5b (ENSDORG00000027820) Nsun6 (ENSDORG00000001962) Cacnb2 (ENSDORG00000001954) Slc39a12 (ENSDORG00000014530) Mrc1 (ENSDORG00000014526) Tmem236 (ENSDORG00000029460) Stam (ENSDORG00000008502) Hacd1 (ENSDORG00000004154) ##22 St8sia6 (ENSDORG00000005804) Vim (ENSDORG00000004494) Trdmt1 (ENSDORG00000004493) Cubn (ENSDORG00000016262) Rsu1 (ENSDORG00000000068) C1ql3 (ENSDORG00000000067) Pter (ENSDORG00000026635) ENSDORG00000005912 ENSDORG00000028964 Itga8 (ENSDORG00000005910) ENSDORG00000005909 Nmt2 (ENSDORG00000009785) Rpp38 (ENSDORG00000009783) Acbd7 (ENSDORG00000004624) Olah (ENSDORG00000023566) Myomorpha ANCESTRAL SPECIES 34 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Lesser Egyptian jerboa MODERN SPECIES 91 Mrc1 (ENSJJAG00000008783) ENSJJAG00000021326 Tmem236 (ENSJJAG00000016260) ENSJJAG00000018425 Hacd1 (ENSJJAG00000020271) ##22 St8sia6 (ENSJJAG00000016521) Vim (ENSJJAG00000007888) Trdmt1 (ENSJJAG00000000541) Cubn (ENSJJAG00000015990) Rsu1 (ENSJJAG00000013269) C1ql3 (ENSJJAG00000018950) Pter (ENSJJAG00000021140) Mindy3 (ENSJJAG00000000194) Itga8 (ENSJJAG00000016914) Fam171a1 (ENSJJAG00000012784) ENSJJAG00000018733 Rpp38 (ENSJJAG00000007523) Olah (ENSJJAG00000008098) Meig1 (ENSJJAG00000007890) Dclre1c (ENSJJAG00000000957) Muroidea ANCESTRAL SPECIES 35 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Upper Galilee mountains blind mole rat MODERN SPECIES 865 Hacd1 (ENSNGAG00000023543) ##22 St8sia6 (ENSNGAG00000019689) Vim (ENSNGAG00000023675) Trdmt1 (ENSNGAG00000023336) Cubn (ENSNGAG00000018169) Rsu1 (ENSNGAG00000023798) C1ql3 (ENSNGAG00000020120) Pter (ENSNGAG00000019479) Mindy3 (ENSNGAG00000023387) Itga8 (ENSNGAG00000016558) ENSNGAG00000010106 ENSNGAG00000012914 Muroidea_A ANCESTRAL SPECIES 14 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Cricetidae ANCESTRAL SPECIES 7 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Cricetidae_B ANCESTRAL SPECIES 5 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00940000154775.c.b ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Northern American deer mouse MODERN SPECIES 18 ENSPEMG00000029096 Dnajc1 (ENSPEMG00000008697) ENSPEMG00000013058 Mllt10 (ENSPEMG00000006812) Skida1 (ENSPEMG00000002718) Nebl (ENSPEMG00000022900) Plxdc2 (ENSPEMG00000016755) Malrd1 (ENSPEMG00000012195) Arl5b (ENSPEMG00000012290) Nsun6 (ENSPEMG00000023389) Cacnb2 (ENSPEMG00000014893) Slc39a12 (ENSPEMG00000012373) Mrc1 (ENSPEMG00000024175) Tmem236 (ENSPEMG00000013838) Stam (ENSPEMG00000014815) Hacd1 (ENSPEMG00000024206) ##22 St8sia6 (ENSPEMG00000029895) ENSPEMG00000000946 Vim (ENSPEMG00000012261) Trdmt1 (ENSPEMG00000018297) Cubn (ENSPEMG00000012926) Rsu1 (ENSPEMG00000015677) C1ql3 (ENSPEMG00000024317) Pter (ENSPEMG00000008590) Mindy3 (ENSPEMG00000012561) Itga8 (ENSPEMG00000015642) Fam171a1 (ENSPEMG00000011973) Nmt2 (ENSPEMG00000014922) Rpp38 (ENSPEMG00000008375) Acbd7 (ENSPEMG00000015811) Olah (ENSPEMG00000015490) Prairie vole MODERN SPECIES 3 ENSMOCG00000010042 ENSMOCG00000015083 ENSMOCG00000013215 ENSMOCG00000014869 ENSMOCG00000019870 Plxdc2 (ENSMOCG00000000221) Malrd1 (ENSMOCG00000017618) ENSMOCG00000015347 Arl5b (ENSMOCG00000013705) Nsun6 (ENSMOCG00000009814) Cacnb2 (ENSMOCG00000004971) Slc39a12 (ENSMOCG00000013804) Mrc1 (ENSMOCG00000021685) Tmem236 (ENSMOCG00000020803) ENSMOCG00000014190 Hacd1 (ENSMOCG00000003364) ##22 St8sia6 (ENSMOCG00000017932) ENSMOCG00000010310 Vim (ENSMOCG00000007923) Trdmt1 (ENSMOCG00000019714) Cubn (ENSMOCG00000001684) Rsu1 (ENSMOCG00000011180) C1ql3 (ENSMOCG00000019674) Pter (ENSMOCG00000013640) ENSMOCG00000022032 Mindy3 (ENSMOCG00000007860) Itga8 (ENSMOCG00000020514) Fam171a1 (ENSMOCG00000021571) Nmt2 (ENSMOCG00000005760) Rpp38 (ENSMOCG00000007020) Cricetinae ANCESTRAL SPECIES 26 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000154775.c.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Chinese hamster chok1gshd MODERN SPECIES 317 Dnajc1 (ENSCGRG00001020513) Mllt10 (ENSCGRG00001013820) Skida1 (ENSCGRG00001015186) Nebl (ENSCGRG00001009495) Plxdc2 (ENSCGRG00001024180) Malrd1 (ENSCGRG00001022517) Arl5b (ENSCGRG00001016642) Nsun6 (ENSCGRG00001023166) Cacnb2 (ENSCGRG00001017190) ENSCGRG00001013591 Slc39a12 (ENSCGRG00001009935) Mrc1 (ENSCGRG00001017741) Tmem236 (ENSCGRG00001018727) Stam (ENSCGRG00001022486) ENSCGRG00001012695 Hacd1 (ENSCGRG00001017271) ##22 St8sia6 (ENSCGRG00001024875) Vim (ENSCGRG00001015134) Trdmt1 (ENSCGRG00001001025) Cubn (ENSCGRG00001019615) Rsu1 (ENSCGRG00001000898) ENSCGRG00001023344 C1ql3 (ENSCGRG00001002028) Pter (ENSCGRG00001013707) Mindy3 (ENSCGRG00001008270) Itga8 (ENSCGRG00001021942) ENSCGRG00001022446 Fam171a1 (ENSCGRG00001015846) Nmt2 (ENSCGRG00001014438) Rpp38 (ENSCGRG00001001395) Acbd7 (ENSCGRG00001000337) Golden Hamster MODERN SPECIES 728 ENSMAUG00000014201 Arl5b (ENSMAUG00000003245) Nsun6 (ENSMAUG00000016025) Cacnb2 (ENSMAUG00000003823) ENSMAUG00000002961 Mrc1 (ENSMAUG00000009450) Tmem236 (ENSMAUG00000013500) Stam (ENSMAUG00000001053) Hacd1 (ENSMAUG00000014257) ##22 St8sia6 (ENSMAUG00000008670) Vim (ENSMAUG00000004577) Trdmt1 (ENSMAUG00000013279) Cubn (ENSMAUG00000015453) Rsu1 (ENSMAUG00000014980) C1ql3 (ENSMAUG00000007710) Pter (ENSMAUG00000022178) Mindy3 (ENSMAUG00000021174) Itga8 (ENSMAUG00000016581) Fam171a1 (ENSMAUG00000008247) Nmt2 (ENSMAUG00000021877) Rpp38 (ENSMAUG00000003644) Acbd7 (ENSMAUG00000005954) Olah (ENSMAUG00000020873) Dclre1c (ENSMAUG00000021563) Murinae ANCESTRAL SPECIES 27 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Rat MODERN SPECIES 8 Mllt10 (ENSRNOG00000022249) Skida1 (ENSRNOG00000033330) ENSRNOG00000064328 AABR07028748.1 (ENSRNOG00000030638) Nebl (ENSRNOG00000049452) Plxdc2 (ENSRNOG00000000142) Malrd1 (ENSRNOG00000052916) AABR07029559.1 (ENSRNOG00000052567) Arl5b (ENSRNOG00000064112) Nsun6 (ENSRNOG00000018520) Cacnb2 (ENSRNOG00000018378) Slc39a12 (ENSRNOG00000025639) Mrc1 (ENSRNOG00000018251) Tmem236 (ENSRNOG00000037982) Stam (ENSRNOG00000060817) Hacd1 (ENSRNOG00000043192) ##22 St8sia6 (ENSRNOG00000064205) Vim (ENSRNOG00000018087) Trdmt1 (ENSRNOG00000026132) Cubn (ENSRNOG00000029047) Rsu1 (ENSRNOG00000017595) C1ql3 (ENSRNOG00000017459) Pter (ENSRNOG00000017328) LOC108348617 (ENSRNOG00000060417) Mindy3 (ENSRNOG00000016955) Itga8 (ENSRNOG00000016538) Fam171a1 (ENSRNOG00000016534) Nmt2 (ENSRNOG00000026248) Rpp38 (ENSRNOG00000063181) Olah (ENSRNOG00000016403) Rpl34-ps1 (ENSRNOG00000038045) Mus ANCESTRAL SPECIES 1 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00860000136241 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 Shrew mouse MODERN SPECIES 16 Commd3 (MGP_PahariEiJ_G0024662) Dnajc1 (MGP_PahariEiJ_G0024661) Mllt10 (MGP_PahariEiJ_G0024660) Skida1 (MGP_PahariEiJ_G0024659) MGP_PahariEiJ_G0024658 MGP_PahariEiJ_G0024657 Plxdc2 (MGP_PahariEiJ_G0024656) Malrd1 (MGP_PahariEiJ_G0024655) Arl5b (MGP_PahariEiJ_G0024654) MGP_PahariEiJ_G0024653 Cacnb2 (MGP_PahariEiJ_G0024652) Slc39a12 (MGP_PahariEiJ_G0024651) Mrc1 (MGP_PahariEiJ_G0024650) Tmem236 (MGP_PahariEiJ_G0024649) Stam (MGP_PahariEiJ_G0024648) Hacd1 (MGP_PahariEiJ_G0024647) ##22 St8sia6 (MGP_PahariEiJ_G0024646) Vim (MGP_PahariEiJ_G0024645) Trdmt1 (MGP_PahariEiJ_G0024644) Cubn (MGP_PahariEiJ_G0024643) Rsu1 (MGP_PahariEiJ_G0024642) C1ql3 (MGP_PahariEiJ_G0024641) Pter (MGP_PahariEiJ_G0024640) Mindy3 (MGP_PahariEiJ_G0024639) Itga8 (MGP_PahariEiJ_G0024638) Mus_A ANCESTRAL SPECIES ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000162492.g.a ENSGT00860000136241 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00940000153969.a ENSGT00390000011669 ENSGT00390000000121 ENSGT00390000018872 ENSGT00950000183823 ENSGT00790000123099 Ryukyu mouse MODERN SPECIES 11 Mllt10 (MGP_CAROLIEiJ_G0023204) Skida1 (MGP_CAROLIEiJ_G0023203) MGP_CAROLIEiJ_G0023202 H2al2a (MGP_CAROLIEiJ_G0023201) Nebl (MGP_CAROLIEiJ_G0023200) Plxdc2 (MGP_CAROLIEiJ_G0023199) Malrd1 (MGP_CAROLIEiJ_G0023198) Arl5b (MGP_CAROLIEiJ_G0023197) Nsun6 (MGP_CAROLIEiJ_G0023196) MGP_CAROLIEiJ_G0023195 Cacnb2 (MGP_CAROLIEiJ_G0023194) Slc39a12 (MGP_CAROLIEiJ_G0023193) Mrc1 (MGP_CAROLIEiJ_G0023192) Tmem236 (MGP_CAROLIEiJ_G0023191) Stam (MGP_CAROLIEiJ_G0023190) Hacd1 (MGP_CAROLIEiJ_G0023189) ##22 St8sia6 (MGP_CAROLIEiJ_G0023188) Vim (MGP_CAROLIEiJ_G0023187) Trdmt1 (MGP_CAROLIEiJ_G0023186) Cubn (MGP_CAROLIEiJ_G0023185) Rsu1 (MGP_CAROLIEiJ_G0023184) C1ql3 (MGP_CAROLIEiJ_G0023183) Pter (MGP_CAROLIEiJ_G0023182) Mindy3 (MGP_CAROLIEiJ_G0023181) Itga8 (MGP_CAROLIEiJ_G0023180) Ankrd16 (MGP_CAROLIEiJ_G0023179) Fbh1 (MGP_CAROLIEiJ_G0023178) Il15ra (MGP_CAROLIEiJ_G0023177) Il2ra (MGP_CAROLIEiJ_G0023176) MGP_CAROLIEiJ_G0023175 MGP_CAROLIEiJ_G0023174 Mus_B ANCESTRAL SPECIES 1 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000162492.g.a ENSGT00860000136241 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00940000153969.a ENSGT00390000011669 ENSGT00390000000121 ENSGT00390000018872 ENSGT00950000183823 ENSGT00790000123099 Mouse MODERN SPECIES 11 Commd3 (ENSMUSG00000051154) Dnajc1 (ENSMUSG00000026740) Mllt10 (ENSMUSG00000026743) Skida1 (ENSMUSG00000054074) H2al2a (ENSMUSG00000062651) Nebl (ENSMUSG00000053702) Plxdc2 (ENSMUSG00000026748) Malrd1 (ENSMUSG00000075520) Arl5b (ENSMUSG00000017418) Nsun6 (ENSMUSG00000026707) Cacnb2 (ENSMUSG00000057914) Slc39a12 (ENSMUSG00000036949) Mrc1 (ENSMUSG00000026712) Tmem236 (ENSMUSG00000061531) Stam (ENSMUSG00000026718) Hacd1 (ENSMUSG00000063275) ##22 St8sia6 (ENSMUSG00000003418) Vim (ENSMUSG00000026728) Trdmt1 (ENSMUSG00000026723) Cubn (ENSMUSG00000026726) Rsu1 (ENSMUSG00000026727) C1ql3 (ENSMUSG00000049630) Pter (ENSMUSG00000026730) Mindy3 (ENSMUSG00000026767) Itga8 (ENSMUSG00000026768) Ankrd16 (ENSMUSG00000047909) Fbh1 (ENSMUSG00000058594) Il15ra (ENSMUSG00000023206) Il2ra (ENSMUSG00000026770) Rbm17 (ENSMUSG00000037197) Pfkfb3 (ENSMUSG00000026773) Mus_C ANCESTRAL SPECIES 30 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000162492.g.a ENSGT00860000136241 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00940000153969.a ENSGT00390000011669 ENSGT00390000000121 ENSGT00390000018872 ENSGT00950000183823 ENSGT00790000123099 spretus MODERN SPECIES 11 Bmi1 (MGP_SPRETEiJ_G0024122) Commd3 (MGP_SPRETEiJ_G0024121) Dnajc1 (MGP_SPRETEiJ_G0024120) Mllt10 (MGP_SPRETEiJ_G0024119) Skida1 (MGP_SPRETEiJ_G0024118) MGP_SPRETEiJ_G0024117 Nebl (MGP_SPRETEiJ_G0024116) Plxdc2 (MGP_SPRETEiJ_G0024115) Malrd1 (MGP_SPRETEiJ_G0024114) Arl5b (MGP_SPRETEiJ_G0024113) Cacnb2 (MGP_SPRETEiJ_G0024111) Slc39a12 (MGP_SPRETEiJ_G0024110) Mrc1 (MGP_SPRETEiJ_G0024109) Tmem236 (MGP_SPRETEiJ_G0024108) Stam (MGP_SPRETEiJ_G0024107) Hacd1 (MGP_SPRETEiJ_G0024106) ##22 St8sia6 (MGP_SPRETEiJ_G0024105) Vim (MGP_SPRETEiJ_G0024104) Trdmt1 (MGP_SPRETEiJ_G0024103) Cubn (MGP_SPRETEiJ_G0024102) Rsu1 (MGP_SPRETEiJ_G0024101) C1ql3 (MGP_SPRETEiJ_G0024100) Pter (MGP_SPRETEiJ_G0024099) Mindy3 (MGP_SPRETEiJ_G0024098) Itga8 (MGP_SPRETEiJ_G0024097) Ankrd16 (MGP_SPRETEiJ_G0024096) Fbh1 (MGP_SPRETEiJ_G0024095) Il15ra (MGP_SPRETEiJ_G0024094) Il2ra (MGP_SPRETEiJ_G0024093) MGP_SPRETEiJ_G0024092 Rbm17 (MGP_SPRETEiJ_G0024091) Steppe mouse MODERN SPECIES 2470 Slc39a12 (ENSMSIG00000026045) Mrc1 (ENSMSIG00000025969) Tmem236 (ENSMSIG00000025954) Stam (ENSMSIG00000025928) ENSMSIG00000025923 ##22 Primates ANCESTRAL SPECIES 27 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00940000172425 ENSGT00410000028701 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Haplorrhini ANCESTRAL SPECIES 32 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00940000172425 ENSGT00410000028701 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Tarsier MODERN SPECIES 4033 SLC39A12 (ENSTSYG00000002162) MRC1 (ENSTSYG00000003473) TMEM236 (ENSTSYG00000033649) STAM (ENSTSYG00000003141) HACD1 (ENSTSYG00000009365) ##22 ST8SIA6 (ENSTSYG00000013850) ENSTSYG00000004937 TRDMT1 (ENSTSYG00000003051) CUBN (ENSTSYG00000001962) Simiiformes ANCESTRAL SPECIES 29 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00410000028701 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Catarrhini ANCESTRAL SPECIES 26 ENSGT00410000028443 ENSGT00410000028701 ENSGT00910000147166 ENSGT00940000164579 ENSGT00940000153336.e.b.a.a.a ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 Hominoidea ANCESTRAL SPECIES 11 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00410000028701 ENSGT00940000164579 ENSGT00940000153336.e.b.a.a.a ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Gibbon MODERN SPECIES 24 DNAJC1 (ENSNLEG00000012820) MLLT10 (ENSNLEG00000012771) ENSNLEG00000012769 NEBL (ENSNLEG00000012730) ENSNLEG00000012768 ENSNLEG00000035400 PLXDC2 (ENSNLEG00000012709) MALRD1 (ENSNLEG00000012702) ENSNLEG00000028677 ARL5B (ENSNLEG00000027383) NSUN6 (ENSNLEG00000012680) ENSNLEG00000012660 SLC39A12 (ENSNLEG00000012624) TMEM236 (ENSNLEG00000012620) STAM (ENSNLEG00000012603) HACD1 (ENSNLEG00000012594) ##22 ENSNLEG00000012592 ENSNLEG00000012578 ENSNLEG00000012568 TRDMT1 (ENSNLEG00000012525) CUBN (ENSNLEG00000012456) RSU1 (ENSNLEG00000029235) C1QL3 (ENSNLEG00000028261) PTER (ENSNLEG00000012435) MINDY3 (ENSNLEG00000012397) ITGA8 (ENSNLEG00000012372) FAM171A1 (ENSNLEG00000012363) NMT2 (ENSNLEG00000012356) ENSNLEG00000032724 ENSNLEG00000028777 ACBD7 (ENSNLEG00000027478) Hominidae ANCESTRAL SPECIES 13 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00410000028701 ENSGT00940000164579 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Orangutan MODERN SPECIES 1 DNAJC1 (ENSPPYG00000002140) MLLT10 (ENSPPYG00000002139) SKIDA1 (ENSPPYG00000002138) ENSPPYG00000031585 ENSPPYG00000033124 NEBL (ENSPPYG00000002136) PLXDC2 (ENSPPYG00000002135) MALRD1 (ENSPPYG00000002133) ARL5B (ENSPPYG00000002132) NSUN6 (ENSPPYG00000002131) CACNB2 (ENSPPYG00000002130) SLC39A12 (ENSPPYG00000002129) MRC1 (ENSPPYG00000002128) TMEM236 (ENSPPYG00000002127) STAM (ENSPPYG00000002126) HACD1 (ENSPPYG00000002125) ##22 ENSPPYG00000039748 ST8SIA6 (ENSPPYG00000002123) VIM (ENSPPYG00000037241) TRDMT1 (ENSPPYG00000002122) CUBN (ENSPPYG00000002121) RSU1 (ENSPPYG00000002120) C1QL3 (ENSPPYG00000036834) PTER (ENSPPYG00000002118) MINDY3 (ENSPPYG00000002117) ITGA8 (ENSPPYG00000002116) FAM171A1 (ENSPPYG00000002115) NMT2 (ENSPPYG00000002114) RPP38 (ENSPPYG00000002113) ACBD7 (ENSPPYG00000002111) ENSPPYG00000002110 Homo/Pan/Gorilla group ANCESTRAL SPECIES 28 ENSGT00410000028443 ENSGT00410000028701 ENSGT00910000147166 ENSGT00940000164579 ENSGT00940000172425 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526.c ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Homo/Pan group ANCESTRAL SPECIES 28 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00410000028701 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526.c ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Human MODERN SPECIES 1 COMMD3 (ENSG00000148444) EBLN1 (ENSG00000223601) DNAJC1 (ENSG00000136770) MLLT10 (ENSG00000078403) SKIDA1 (ENSG00000180592) NEBL (ENSG00000078114) PLXDC2 (ENSG00000120594) MALRD1 (ENSG00000204740) ARL5B (ENSG00000165997) NSUN6 (ENSG00000241058) CACNB2 (ENSG00000165995) SLC39A12 (ENSG00000148482) MRC1 (ENSG00000260314) TMEM236 (ENSG00000148483) STAM (ENSG00000136738) HACD1 (ENSG00000165996) ##22 ST8SIA6 (ENSG00000148488) VIM (ENSG00000026025) TRDMT1 (ENSG00000107614) CUBN (ENSG00000107611) RSU1 (ENSG00000148484) C1QL3 (ENSG00000165985) PTER (ENSG00000165983) MINDY3 (ENSG00000148481) ITGA8 (ENSG00000077943) FAM171A1 (ENSG00000148468) NMT2 (ENSG00000152465) RPP38 (ENSG00000152464) ACBD7 (ENSG00000176244) OLAH (ENSG00000152463) MEIG1 (ENSG00000197889) Pan ANCESTRAL SPECIES 11 ENSGT00940000156678 ENSGT00940000164311 ENSGT00940000157711 ENSGT00410000028443 ENSGT00410000028701 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT00940000165196.d ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526.c ENSGT00390000007526.d ENSGT00940000161184 Bonobo MODERN SPECIES 1 EBLN1 (ENSPPAG00000009719) DNAJC1 (ENSPPAG00000027845) ENSPPAG00000041823 MLLT10 (ENSPPAG00000042563) ENSPPAG00000033005 ENSPPAG00000027289 NEBL (ENSPPAG00000040510) PLXDC2 (ENSPPAG00000035548) ARL5B (ENSPPAG00000014300) NSUN6 (ENSPPAG00000042405) CACNB2 (ENSPPAG00000032846) SLC39A12 (ENSPPAG00000038102) MRC1 (ENSPPAG00000042878) TMEM236 (ENSPPAG00000033080) STAM (ENSPPAG00000018265) HACD1 (ENSPPAG00000032530) ##22 ENSPPAG00000027013 ST8SIA6 (ENSPPAG00000012351) VIM (ENSPPAG00000040061) TRDMT1 (ENSPPAG00000033613) CUBN (ENSPPAG00000032308) RSU1 (ENSPPAG00000000879) ENSPPAG00000041659 PTER (ENSPPAG00000035853) MINDY3 (ENSPPAG00000042732) ITGA8 (ENSPPAG00000031070) FAM171A1 (ENSPPAG00000042245) NMT2 (ENSPPAG00000031129) RPP38 (ENSPPAG00000041577) ACBD7 (ENSPPAG00000032610) OLAH (ENSPPAG00000042386) Chimpanzee MODERN SPECIES 1 ENSPTRG00000014075 ENSPTRG00000043439 MLLT10 (ENSPTRG00000002346) MIR1915HG (ENSPTRG00000029922) ENSPTRG00000043771 NEBL (ENSPTRG00000002343) PLXDC2 (ENSPTRG00000002342) MALRD1 (ENSPTRG00000029925) ARL5B (ENSPTRG00000002341) NSUN6 (ENSPTRG00000002340) CACNB2 (ENSPTRG00000002339) SLC39A12 (ENSPTRG00000002338) MRC1 (ENSPTRG00000002336) TMEM236 (ENSPTRG00000052168) STAM (ENSPTRG00000002333) HACD1 (ENSPTRG00000002331) ##22 ENSPTRG00000047019 ST8SIA6 (ENSPTRG00000002330) VIM (ENSPTRG00000002328) TRDMT1 (ENSPTRG00000002327) CUBN (ENSPTRG00000002326) RSU1 (ENSPTRG00000002325) C1QL3 (ENSPTRG00000002324) PTER (ENSPTRG00000002323) MINDY3 (ENSPTRG00000002322) ITGA8 (ENSPTRG00000002321) FAM171A1 (ENSPTRG00000002320) NMT2 (ENSPTRG00000002319) RPP38 (ENSPTRG00000002318) ENSPTRG00000044773 OLAH (ENSPTRG00000002315) Cercopithecidae ANCESTRAL SPECIES 29 ENSGT00410000028701 ENSGT00910000147166 ENSGT00940000164579 ENSGT00940000153336.e.b.a.a.a ENSGT00940000156390 ENSGT00910000147567 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000158017.f ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 Rhinopithecus ANCESTRAL SPECIES 133 ENSGT00390000016470.c.h ENSGT00410000028701 ENSGT00940000164579 ENSGT00940000153336.e.b.a.a.a ENSGT00940000156390 ENSGT00910000147567 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT00940000153299.c.b.b.b.c.b.a ENSGT01030000234535.B ENSGT00940000158017.f ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00910000147477 Golden snub-nosed monkey MODERN SPECIES 2956 SLC39A12 (ENSRROG00000032251) MRC1 (ENSRROG00000042324) TMEM236 (ENSRROG00000032486) STAM (ENSRROG00000036523) HACD1 (ENSRROG00000026405) ##22 ENSRROG00000026874 ENSRROG00000040003 ST8SIA6 (ENSRROG00000043792) ENSRROG00000034844 ENSRROG00000041279 VIM (ENSRROG00000043382) TRDMT1 (ENSRROG00000038628) CUBN (ENSRROG00000034949) RSU1 (ENSRROG00000026599) C1QL3 (ENSRROG00000028945) PTER (ENSRROG00000029935) ENSRROG00000002211 ENSRROG00000014525 Black snub-nosed monkey MODERN SPECIES 278 ENSRBIG00000028506 ENSRBIG00000012592 ENSRBIG00000038023 ENSRBIG00000028138 NEBL (ENSRBIG00000045011) ENSRBIG00000042390 PLXDC2 (ENSRBIG00000038125) MALRD1 (ENSRBIG00000039068) ARL5B (ENSRBIG00000034745) NSUN6 (ENSRBIG00000033358) CACNB2 (ENSRBIG00000034497) SLC39A12 (ENSRBIG00000036728) MRC1 (ENSRBIG00000015790) TMEM236 (ENSRBIG00000032710) STAM (ENSRBIG00000029794) HACD1 (ENSRBIG00000032558) ##22 ENSRBIG00000018242 ST8SIA6 (ENSRBIG00000032235) ENSRBIG00000033723 VIM (ENSRBIG00000028816) TRDMT1 (ENSRBIG00000034410) CUBN (ENSRBIG00000038894) RSU1 (ENSRBIG00000032950) C1QL3 (ENSRBIG00000040157) PTER (ENSRBIG00000040043) ENSRBIG00000044406 Cercopithecinae ANCESTRAL SPECIES 15 ENSGT00410000028701 ENSGT00910000147166 ENSGT00940000164579 ENSGT00940000153336.e.b.a.a.a ENSGT00940000156390 ENSGT00910000147567 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT00390000002416.i.b ENSGT01030000234535.B ENSGT00940000158017.f ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 Vervet Monkey MODERN SPECIES 28 BMI1 (ENSCSAG00000012472) DNAJC1 (ENSCSAG00000012486) MLLT10 (ENSCSAG00000012502) SKIDA1 (ENSCSAG00000019057) ENSCSAG00000012513 ENSCSAG00000012531 NEBL (ENSCSAG00000012544) PLXDC2 (ENSCSAG00000012558) ARL5B (ENSCSAG00000012564) NSUN6 (ENSCSAG00000012571) CACNB2 (ENSCSAG00000012581) SLC39A12 (ENSCSAG00000012595) MRC1 (ENSCSAG00000012614) TMEM236 (ENSCSAG00000012628) STAM (ENSCSAG00000012638) HACD1 (ENSCSAG00000012651) ##22 ENSCSAG00000019056 ST8SIA6 (ENSCSAG00000012671) ENSCSAG00000012688 VIM (ENSCSAG00000012697) TRDMT1 (ENSCSAG00000012710) CUBN (ENSCSAG00000012746) RSU1 (ENSCSAG00000012762) C1QL3 (ENSCSAG00000012770) PTER (ENSCSAG00000012817) MINDY3 (ENSCSAG00000012834) ITGA8 (ENSCSAG00000012859) FAM171A1 (ENSCSAG00000012873) NMT2 (ENSCSAG00000012889) RPP38 (ENSCSAG00000019055) OLAH (ENSCSAG00000012929) Cercopithecinae_a ANCESTRAL SPECIES 14 ENSGT00410000028443 ENSGT00390000016470.c.h ENSGT00410000028701 ENSGT00940000153336.e.b.a.a.a ENSGT00940000156390 ENSGT00910000147567 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT00390000002416.i.b ENSGT01030000234535.B ENSGT00940000158017.f ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 Macaca ANCESTRAL SPECIES 11 ENSGT00410000028443 ENSGT00390000016470.c.h ENSGT00410000028701 ENSGT00940000164579.i.b ENSGT00940000153336.e.b.a.a.a ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT00390000002416.i.b ENSGT01030000234535.B ENSGT00940000158017.f ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00910000147477 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 Macaca_a ANCESTRAL SPECIES 13 ENSGT00410000028443 ENSGT00390000016470.c.h ENSGT00390000006922.m.b.a.c.b.c.b ENSGT00410000028701 ENSGT00940000164579.i.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT01030000240310 ENSGT00940000161184.n ENSGT00390000015518.g.b Rhesus MODERN SPECIES 19 ENSMMUG00000018296 ENSMMUG00000041517 ENSMMUG00000038216 NEBL (ENSMMUG00000010589) PLXDC2 (ENSMMUG00000015370) MALRD1 (ENSMMUG00000048865) ARL5B (ENSMMUG00000007453) NSUN6 (ENSMMUG00000007451) CACNB2 (ENSMMUG00000007445) ENSMMUG00000063350 SLC39A12 (ENSMMUG00000011624) MRC1 (ENSMMUG00000011620) TMEM236 (ENSMMUG00000062701) ENSMMUG00000050741 STAM (ENSMMUG00000001700) HACD1 (ENSMMUG00000020736) ##22 ST8SIA6 (ENSMMUG00000051216) VIM (ENSMMUG00000003193) TRDMT1 (ENSMMUG00000052060) CUBN (ENSMMUG00000016069) ENSMMUG00000054835 RSU1 (ENSMMUG00000016067) C1QL3 (ENSMMUG00000016064) PTER (ENSMMUG00000016063) ENSMMUG00000050160 MINDY3 (ENSMMUG00000023766) ITGA8 (ENSMMUG00000011661) FAM171A1 (ENSMMUG00000015286) ENSMMUG00000062622 NMT2 (ENSMMUG00000007680) RPP38 (ENSMMUG00000007679) Crab-eating macaque MODERN SPECIES 19 ENSMFAG00000038593 ENSMFAG00000003101 NEBL (ENSMFAG00000042804) ENSMFAG00000054300 PLXDC2 (ENSMFAG00000045260) ENSMFAG00000051937 ENSMFAG00000048894 ENSMFAG00000057474 MALRD1 (ENSMFAG00000041109) ARL5B (ENSMFAG00000059466) NSUN6 (ENSMFAG00000045602) CACNB2 (ENSMFAG00000031605) MRC1 (ENSMFAG00000036299) ENSMFAG00000052964 STAM (ENSMFAG00000045137) HACD1 (ENSMFAG00000040973) ##22 ST8SIA6 (ENSMFAG00000001392) VIM (ENSMFAG00000003332) TRDMT1 (ENSMFAG00000042379) CUBN (ENSMFAG00000030948) RSU1 (ENSMFAG00000031371) C1QL3 (ENSMFAG00000030290) PTER (ENSMFAG00000045890) MINDY3 (ENSMFAG00000039849) ITGA8 (ENSMFAG00000032706) FAM171A1 (ENSMFAG00000003475) ENSMFAG00000056567 NMT2 (ENSMFAG00000039555) ENSMFAG00000055041 ENSMFAG00000049102 ENSMFAG00000043001 Pig-tailed macaque MODERN SPECIES 144 COL22A1 (ENSMNEG00000042329) FAM135B (ENSMNEG00000030000) KHDRBS3 (ENSMNEG00000038285) PLXDC2 (ENSMNEG00000038888) MALRD1 (ENSMNEG00000039237) ARL5B (ENSMNEG00000006331) NSUN6 (ENSMNEG00000045340) CACNB2 (ENSMNEG00000030776) SLC39A12 (ENSMNEG00000042340) MRC1 (ENSMNEG00000029616) TMEM236 (ENSMNEG00000044749) STAM (ENSMNEG00000029186) HACD1 (ENSMNEG00000041635) ##22 ENSMNEG00000000056 ST8SIA6 (ENSMNEG00000014280) ENSMNEG00000033982 VIM (ENSMNEG00000037617) TRDMT1 (ENSMNEG00000038531) ENSMNEG00000035400 RSU1 (ENSMNEG00000006587) C1QL3 (ENSMNEG00000036294) ENSMNEG00000009520 PTER (ENSMNEG00000030769) MINDY3 (ENSMNEG00000041792) ITGA8 (ENSMNEG00000001301) FAM171A1 (ENSMNEG00000045103) Cercopithecinae_b ANCESTRAL SPECIES 41 ENSGT00410000028443 ENSGT00390000016470.c.h ENSGT00410000028701 ENSGT00940000153336.e.b.a.a.a ENSGT00940000156390 ENSGT00910000147567 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000158017.f ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00910000147477 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 Olive baboon MODERN SPECIES 2 ENSPANG00000029637 ENSPANG00000041664 PLXDC2 (ENSPANG00000023138) MALRD1 (ENSPANG00000029973) ENSPANG00000038333 ENSPANG00000043731 ARL5B (ENSPANG00000023140) NSUN6 (ENSPANG00000023143) CACNB2 (ENSPANG00000023141) ENSPANG00000044587 SLC39A12 (ENSPANG00000023178) MRC1 (ENSPANG00000023160) ENSPANG00000033239 STAM (ENSPANG00000023155) ENSPANG00000043508 HACD1 (ENSPANG00000023152) ##22 ENSPANG00000029614 ST8SIA6 (ENSPANG00000023151) ENSPANG00000045774 ENSPANG00000040536 VIM (ENSPANG00000008760) TRDMT1 (ENSPANG00000024541) CUBN (ENSPANG00000006876) RSU1 (ENSPANG00000023150) PTER (ENSPANG00000023147) C1QL3 (ENSPANG00000023149) ENSPANG00000037380 ENSPANG00000037265 ENSPANG00000045077 MINDY3 (ENSPANG00000023144) ENSPANG00000042984 Cercopithecinae_d ANCESTRAL SPECIES 86 ENSGT00410000028443 ENSGT00390000016470.c.h ENSGT00410000028701 ENSGT00940000153336.e.b.a.a.a ENSGT00940000156390 ENSGT00910000147567 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000158017.f ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00910000147477 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 Drill MODERN SPECIES 85 MRC1 (ENSMLEG00000029655) TMEM236 (ENSMLEG00000000236) STAM (ENSMLEG00000041638) HACD1 (ENSMLEG00000038394) ##22 Sooty mangabey MODERN SPECIES 625 MLLT10 (ENSCATG00000034793) ENSCATG00000034759 ENSCATG00000021039 NEBL (ENSCATG00000034208) ENSCATG00000038577 ENSCATG00000032438 PLXDC2 (ENSCATG00000037451) MALRD1 (ENSCATG00000044840) ARL5B (ENSCATG00000032291) NSUN6 (ENSCATG00000038294) CACNB2 (ENSCATG00000036637) SLC39A12 (ENSCATG00000030106) MRC1 (ENSCATG00000034649) TMEM236 (ENSCATG00000026506) STAM (ENSCATG00000039833) HACD1 (ENSCATG00000045301) ##22 ST8SIA6 (ENSCATG00000044588) ENSCATG00000030406 VIM (ENSCATG00000019472) TRDMT1 (ENSCATG00000041864) CUBN (ENSCATG00000044997) RSU1 (ENSCATG00000044782) C1QL3 (ENSCATG00000030143) PTER (ENSCATG00000033932) ENSCATG00000016441 MINDY3 (ENSCATG00000038269) ITGA8 (ENSCATG00000038895) FAM171A1 (ENSCATG00000020762) ENSCATG00000032770 NMT2 (ENSCATG00000029611) ENSCATG00000034050 Platyrrhini ANCESTRAL SPECIES 39 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00410000028701 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Mas night monkey MODERN SPECIES 487 ENSANAG00000031978 ENSANAG00000024039 MALRD1 (ENSANAG00000026823) ARL5B (ENSANAG00000022959) NSUN6 (ENSANAG00000027899) CACNB2 (ENSANAG00000033021) SLC39A12 (ENSANAG00000036311) MRC1 (ENSANAG00000027738) TMEM236 (ENSANAG00000021184) STAM (ENSANAG00000027522) HACD1 (ENSANAG00000022762) ##22 ST8SIA6 (ENSANAG00000026470) Cebidae ANCESTRAL SPECIES 37 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00410000028701 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Cebidae_a ANCESTRAL SPECIES 45 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00410000028701 ENSGT00940000153336.f ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Capuchin MODERN SPECIES 61 PLXDC2 (ENSCCAG00000031968) MALRD1 (ENSCCAG00000028416) ENSCCAG00000036936 ARL5B (ENSCCAG00000035559) NSUN6 (ENSCCAG00000036696) CACNB2 (ENSCCAG00000014414) SLC39A12 (ENSCCAG00000030436) MRC1 (ENSCCAG00000038041) TMEM236 (ENSCCAG00000024575) STAM (ENSCCAG00000028994) HACD1 (ENSCCAG00000025174) ##22 ST8SIA6 (ENSCCAG00000030304) VIM (ENSCCAG00000029506) TRDMT1 (ENSCCAG00000032009) CUBN (ENSCCAG00000026962) ENSCCAG00000029447 C1QL3 (ENSCCAG00000025228) PTER (ENSCCAG00000036391) MINDY3 (ENSCCAG00000037173) ITGA8 (ENSCCAG00000003904) FAM171A1 (ENSCCAG00000030661) NMT2 (ENSCCAG00000020818) ENSCCAG00000029257 ACBD7 (ENSCCAG00000031763) OLAH (ENSCCAG00000021477) MEIG1 (ENSCCAG00000032491) Marmoset MODERN SPECIES 19 DNAJC1 (ENSCJAG00000008044) MLLT10 (ENSCJAG00000008081) SKIDA1 (ENSCJAG00000008166) ENSCJAG00000074881 ENSCJAG00000077734 ENSCJAG00000073169 NEBL (ENSCJAG00000008182) PLXDC2 (ENSCJAG00000008238) MALRD1 (ENSCJAG00000008267) ARL5B (ENSCJAG00000039276) NSUN6 (ENSCJAG00000008427) SLC39A12 (ENSCJAG00000008292) MRC1 (ENSCJAG00000008479) TMEM236 (ENSCJAG00000008561) STAM (ENSCJAG00000008590) HACD1 (ENSCJAG00000008663) ##22 ST8SIA6 (ENSCJAG00000008685) VIM (ENSCJAG00000008688) TRDMT1 (ENSCJAG00000008937) CUBN (ENSCJAG00000008967) RSU1 (ENSCJAG00000043733) C1QL3 (ENSCJAG00000075165) PTER (ENSCJAG00000009020) ENSCJAG00000016367 MINDY3 (ENSCJAG00000009028) ENSCJAG00000083534 ITGA8 (ENSCJAG00000009080) FAM171A1 (ENSCJAG00000041174) NMT2 (ENSCJAG00000009169) RPP38 (ENSCJAG00000046117) ACBD7 (ENSCJAG00000009249) Strepsirrhini ANCESTRAL SPECIES 30 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Bushbaby MODERN SPECIES 134 BMI1 (ENSOGAG00000011619) COMMD3 (ENSOGAG00000011616) DNAJC1 (ENSOGAG00000001421) MLLT10 (ENSOGAG00000016277) SKIDA1 (ENSOGAG00000028883) NEBL (ENSOGAG00000013727) PLXDC2 (ENSOGAG00000013723) MALRD1 (ENSOGAG00000001206) ARL5B (ENSOGAG00000006248) NSUN6 (ENSOGAG00000003925) CACNB2 (ENSOGAG00000003922) SLC39A12 (ENSOGAG00000007775) MRC1 (ENSOGAG00000007770) TMEM236 (ENSOGAG00000007768) STAM (ENSOGAG00000005101) HACD1 (ENSOGAG00000031469) ##22 ST8SIA6 (ENSOGAG00000013539) ENSOGAG00000006667 TRDMT1 (ENSOGAG00000006662) CUBN (ENSOGAG00000006645) RSU1 (ENSOGAG00000006642) C1QL3 (ENSOGAG00000027285) PTER (ENSOGAG00000007957) MINDY3 (ENSOGAG00000008064) ITGA8 (ENSOGAG00000008062) FAM171A1 (ENSOGAG00000025442) NMT2 (ENSOGAG00000008060) RPP38 (ENSOGAG00000008059) ENSOGAG00000033527 MEIG1 (ENSOGAG00000033381) DCLRE1C (ENSOGAG00000004732) Lemuriformes ANCESTRAL SPECIES 42 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Mouse lemur MODERN SPECIES 17 ENSMICG00000041494 MAP3K8 (ENSMICG00000003305) MTPAP (ENSMICG00000026621) JCAD (ENSMICG00000006774) SVIL (ENSMICG00000005393) ZNF438 (ENSMICG00000046502) ENSMICG00000033773 ZEB1 (ENSMICG00000006165) ARL5B (ENSMICG00000006011) NSUN6 (ENSMICG00000029435) CACNB2 (ENSMICG00000005995) SLC39A12 (ENSMICG00000005988) MRC1 (ENSMICG00000005965) TMEM236 (ENSMICG00000047850) STAM (ENSMICG00000005948) HACD1 (ENSMICG00000002157) ##22 ST8SIA6 (ENSMICG00000046983) VIM (ENSMICG00000011578) TRDMT1 (ENSMICG00000011567) CUBN (ENSMICG00000011487) RSU1 (ENSMICG00000011480) C1QL3 (ENSMICG00000011478) PTER (ENSMICG00000011472) MINDY3 (ENSMICG00000004501) ITGA8 (ENSMICG00000005791) FAM171A1 (ENSMICG00000002830) NMT2 (ENSMICG00000002826) ACBD7 (ENSMICG00000034874) OLAH (ENSMICG00000045566) MEIG1 (ENSMICG00000034359) DCLRE1C (ENSMICG00000002808) Lemuriformes_a ANCESTRAL SPECIES 49 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00410000028443 ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Coquerels sifaka MODERN SPECIES 840 ARL5B (ENSPCOG00000016365) NSUN6 (ENSPCOG00000004346) CACNB2 (ENSPCOG00000020808) SLC39A12 (ENSPCOG00000019529) MRC1 (ENSPCOG00000023386) TMEM236 (ENSPCOG00000000857) ENSPCOG00000015443 HACD1 (ENSPCOG00000018935) ##22 ST8SIA6 (ENSPCOG00000018501) VIM (ENSPCOG00000019761) TRDMT1 (ENSPCOG00000003698) CUBN (ENSPCOG00000027033) RSU1 (ENSPCOG00000024869) C1QL3 (ENSPCOG00000024503) PTER (ENSPCOG00000028299) ENSPCOG00000018719 ENSPCOG00000012996 ITGA8 (ENSPCOG00000022210) FAM171A1 (ENSPCOG00000019313) NMT2 (ENSPCOG00000014469) ACBD7 (ENSPCOG00000019303) OLAH (ENSPCOG00000013245) MEIG1 (ENSPCOG00000016420) Greater bamboo lemur MODERN SPECIES 244 STAM (ENSPSMG00000024700) HACD1 (ENSPSMG00000024677) ##22 ST8SIA6 (ENSPSMG00000024674) VIM (ENSPSMG00000024668) TRDMT1 (ENSPSMG00000024643) CUBN (ENSPSMG00000024607) RSU1 (ENSPSMG00000024582) C1QL3 (ENSPSMG00000024575) PTER (ENSPSMG00000024572) Atlantogenata ANCESTRAL SPECIES 5 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809.g.a.b ENSGT00940000165398 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Xenarthra ANCESTRAL SPECIES 1005 ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 Sloth MODERN SPECIES 5374 HACD1 (ENSCHOG00000005042) ##22 Armadillo MODERN SPECIES 2198 ENSDNOG00000044653 SLC39A12 (ENSDNOG00000005367) ENSDNOG00000041935 MRC1 (ENSDNOG00000023592) TMEM236 (ENSDNOG00000032513) STAM (ENSDNOG00000016809) HACD1 (ENSDNOG00000011729) ##22 Afrotheria ANCESTRAL SPECIES 11 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000165398 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Afrotheria_a ANCESTRAL SPECIES 11 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000165398 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000155958 ENSGT00940000156737 ENSGT00950000183184.a.b ENSGT00390000017837.b ENSGT00390000007526 ENSGT00940000161184 ENSGT00390000015518 ENSGT00390000013550 Elephant MODERN SPECIES 108 BMI1 (ENSLAFG00000016845) COMMD3 (ENSLAFG00000016837) DNAJC1 (ENSLAFG00000012648) MLLT10 (ENSLAFG00000011035) SKIDA1 (ENSLAFG00000007159) ENSLAFG00000017498 PLXDC2 (ENSLAFG00000001133) ENSLAFG00000030673 ARL5B (ENSLAFG00000001487) NSUN6 (ENSLAFG00000001485) CACNB2 (ENSLAFG00000022457) SLC39A12 (ENSLAFG00000000148) MRC1 (ENSLAFG00000022148) TMEM236 (ENSLAFG00000025844) STAM (ENSLAFG00000005193) HACD1 (ENSLAFG00000005190) ##22 ST8SIA6 (ENSLAFG00000011633) VIM (ENSLAFG00000018142) TRDMT1 (ENSLAFG00000001075) CUBN (ENSLAFG00000013402) RSU1 (ENSLAFG00000013394) C1QL3 (ENSLAFG00000015084) PTER (ENSLAFG00000015079) MINDY3 (ENSLAFG00000000576) ITGA8 (ENSLAFG00000015643) FAM171A1 (ENSLAFG00000017789) NMT2 (ENSLAFG00000030387) RPP38 (ENSLAFG00000000509) ACBD7 (ENSLAFG00000001513) OLAH (ENSLAFG00000001510) MEIG1 (ENSLAFG00000022841) Hyrax MODERN SPECIES 9331 HACD1 (ENSPCAG00000011927) ##22 Platypus MODERN SPECIES 4 DNAJC1 (ENSOANG00000031302) MLLT10 (ENSOANG00000005699) SKIDA1 (ENSOANG00000049964) ENSOANG00000050186 ENSOANG00000005701 ENSOANG00000040751 ENSOANG00000037651 PLXDC2 (ENSOANG00000005703) ARL5B (ENSOANG00000005704) NSUN6 (ENSOANG00000005705) CACNB2 (ENSOANG00000005706) SLC39A12 (ENSOANG00000005707) MRC1 (ENSOANG00000005709) TMEM236 (ENSOANG00000005710) STAM (ENSOANG00000005711) HACD1 (ENSOANG00000001401) ##22 STEAP4 (ENSOANG00000001400) ENSOANG00000050039 ADAM22 (ENSOANG00000014867) ENSOANG00000051333 ENSOANG00000004415 SLC25A40 (ENSOANG00000004418) RUNDC3B (ENSOANG00000004419) ENSOANG00000004421 ENSOANG00000004424 ENSOANG00000049611 ENSOANG00000037782 ENSOANG00000049566 ENSOANG00000040968 ENSOANG00000036381 ITGA8 (ENSOANG00000004432) Anura ANCESTRAL SPECIES 11 ENSGT00900000141099 ENSGT00940000156042 ENSGT00390000015971 ENSGT00940000156678 ENSGT00940000157711 ENSGT00940000153451.a.b ENSGT00940000156390 ENSGT00440000033408.a ENSGT00940000158809 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT01030000234535.B ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639 ENSGT00390000006960 ENSGT00940000170561 ENSGT00390000008042.A.a.b ENSGT00390000008042.A.a.a ENSGT00390000014274 ENSGT00390000015769.A ENSGT00940000155589 ENSGT00400000022250 ENSGT00940000156889 Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000028797 ADAM22 (ENSLLEG00000028886) CLDN12 (ENSLLEG00000029065) GTPBP10 (ENSLLEG00000029084) FAM237B (ENSLLEG00000029133) CFAP69 (ENSLLEG00000029151) STEAP2 (ENSLLEG00000029199) ENSLLEG00000029226 ENSLLEG00000029244 PTER (ENSLLEG00000029284) C1QL3 (ENSLLEG00000029381) ENSLLEG00000029400 RSU1 (ENSLLEG00000029425) ENSLLEG00000029530 STAM (ENSLLEG00000029676) HACD1 (ENSLLEG00000029716) ##22 ST8SIA6 (ENSLLEG00000029774) VIM (ENSLLEG00000005284) TRDMT1 (ENSLLEG00000005344) CUBN (ENSLLEG00000005733) SLC39A12 (ENSLLEG00000007991) CACNB2 (ENSLLEG00000008120) NSUN6 (ENSLLEG00000008853) ARL5B (ENSLLEG00000009070) ENSLLEG00000009161 MALRD1 (ENSLLEG00000009257) ENSLLEG00000010754 PLXDC2 (ENSLLEG00000010799) ENSLLEG00000011016 NEBL (ENSLLEG00000011160) SKIDA1 (ENSLLEG00000011300) Frog MODERN SPECIES 6 pip4k2a (ENSXETG00000030058) spag6 (ENSXETG00000007384) bmi1 (ENSXETG00000007387) commd3 (ENSXETG00000038128) dnajc1 (ENSXETG00000007390) mllt10 (ENSXETG00000007391) skida1 (ENSXETG00000007394) nebl (ENSXETG00000016599) malrd1 (ENSXETG00000040057) arl5b (ENSXETG00000037670) nsun6 (ENSXETG00000022762) cacnb2 (ENSXETG00000022755) slc39a12 (ENSXETG00000001368) mrc1 (ENSXETG00000001366) stam (ENSXETG00000001364) hacd1 (ENSXETG00000007468) ##22 ENSXETG00000036876 st8sia6 (ENSXETG00000007458) vim (ENSXETG00000007462) trdmt1 (ENSXETG00000027671) cubn (ENSXETG00000007453) rsu1 (ENSXETG00000007451) c1ql3 (ENSXETG00000007450) pter (ENSXETG00000007448) ENSXETG00000041718 steap1 (ENSXETG00000045335) steap2 (ENSXETG00000027669) cfap69 (ENSXETG00000007441) FAM237B (ENSXETG00000044844) gtpbp10 (ENSXETG00000007436) adam22 (ENSXETG00000007431) Coelacanth MODERN SPECIES 716 HACD1 (ENSLACG00000015082) ##22 ST8SIA6 (ENSLACG00000014609) VIM (ENSLACG00000014351) TRDMT1 (ENSLACG00000013890) ENSLACG00000013575 CUBN (ENSLACG00000010600) ENSLACG00000009331 RSU1 (ENSLACG00000009271) C1QL3 (ENSLACG00000006910) PTER (ENSLACG00000006284) ENSLACG00000005871 Actinopterygii ANCESTRAL SPECIES 148 ENSGT00440000033408.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT00940000156146 ENSGT00390000016416 ENSGT00940000155299.A ENSGT00940000158676 ENSGT00940000161639.e ENSGT00940000161639.f ENSGT00390000006960 ENSGT00940000170561 ENSGT00390000008042.A.a.b ENSGT00390000008042.A.a.a ENSGT00940000164654 ENSGT00940000156113 ENSGT00940000157532 ENSGT00390000001688 ENSGT00940000154824 Neopterygii ANCESTRAL SPECIES 179 ENSGT00440000033408.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525 ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 ENSGT00940000154920 ENSGT00950000183154.b.a.b ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a ENSGT00940000156313 ENSGT00940000154982 ENSGT00940000153607 ENSGT01030000234607.A.a.a.a.c ENSGT00450000040296 ENSGT00550000074817 Osteoglossocephalai ANCESTRAL SPECIES 217 ENSGT00940000178028 ENSGT00730000111180 ENSGT00940000159257 ENSGT00940000162556.B ENSGT00440000033408.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A ENSGT00530000063668.A.c ENSGT00530000063668.A.d ENSGT00390000014786 ENSGT00390000014290 ENSGT00940000154920 ENSGT00950000183154.b.a.b ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c Clupeocephala ANCESTRAL SPECIES 93 ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00950000183138.a.a.b.u ENSGT00390000005489 ENSGT00730000111180 ENSGT00940000159257 ENSGT00940000162556.B ENSGT00440000033408.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786 ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.b ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u Otomorpha ANCESTRAL SPECIES 120 ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00950000183138.a.a.b.u ENSGT00390000005489 ENSGT00730000111180 ENSGT00940000159257 ENSGT00940000162556.B ENSGT00440000033408.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786 ENSGT00390000014290 ENSGT00950000183154.b.a.b ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b Clupeiformes ANCESTRAL SPECIES 350 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786 ENSGT00390000014290 ENSGT00950000183154.b.a.b ENSGT01060000248592.A.a ENSGT01030000234627.a.a.c ENSGT00390000014737 ENSGT00510000048685.g.a ENSGT00950000183191.a.b Denticle herring MODERN SPECIES 11 thap12b (ENSDCDG00000018803) zgc:112083 (ENSDCDG00000018779) gkup (ENSDCDG00000018774) ENSDCDG00000018767 ZPLD1 (ENSDCDG00000018760) picalmb (ENSDCDG00000018743) ENSDCDG00000018711 ENSDCDG00000018641 hspa8b (ENSDCDG00000017795) lim2.3 (ENSDCDG00000017773) NSUN6 (ENSDCDG00000017772) cacnb2a (ENSDCDG00000017316) zgc:165518 (ENSDCDG00000015437) MRC1 (ENSDCDG00000014996) TMEM236 (ENSDCDG00000014944) hacd1 (ENSDCDG00000014942) ##22 COLEC12 (ENSDCDG00000014940) ENSDCDG00000014936 tyms (ENSDCDG00000014932) enosf1 (ENSDCDG00000014928) adcyap1a (ENSDCDG00000014925) ENSDCDG00000014922 bud23 (ENSDCDG00000014918) SH2B2 (ENSDCDG00000014916) ENSDCDG00000013318 endou (ENSDCDG00000013240) stat2 (ENSDCDG00000013221) ENSDCDG00000013198 ENSDCDG00000013195 WNK2 (ENSDCDG00000013184) itih3b.2 (ENSDCDG00000013174) Atlantic herring MODERN SPECIES 8 ENSCHAG00000005298 ENSCHAG00000005331 ##22 ENSCHAG00000005474 tyms (ENSCHAG00000005494) ENOSF1 (ENSCHAG00000005665) adcyap1a (ENSCHAG00000005800) ENSCHAG00000005814 ENSCHAG00000005993 bud23 (ENSCHAG00000006185) DNAJC30 (ENSCHAG00000006759) SH2B2 (ENSCHAG00000006836) ENSCHAG00000006869 ENSCHAG00000007526 pigm (ENSCHAG00000007561) ENSCHAG00000007573 ANKS6 (ENSCHAG00000007600) RAMP3 (ENSCHAG00000007631) Otophysi ANCESTRAL SPECIES 81 ENSGT00530000063834.e.a ENSGT00940000155633.D ENSGT01050000244890.a.b.b.d ENSGT00630000089910 ENSGT01050000244857.B.a ENSGT00940000158945.u.a ENSGT00940000156325 ENSGT00440000033408.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786 ENSGT00390000014290 ENSGT00950000183154.b.a.b ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b Characiphysae ANCESTRAL SPECIES 103 ENSGT00530000063834.e.a ENSGT00940000155633.D ENSGT01050000244890.a.b.b.d ENSGT00630000089910 ENSGT01050000244857.B.a ENSGT00940000158945.u.a ENSGT00940000156325 ENSGT00440000033408.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786 ENSGT00390000014290 ENSGT00940000154920.bb.a ENSGT00950000183154.b.a.b ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Channel catfish MODERN SPECIES 26 ncf2 (ENSIPUG00000005331) garem (ENSIPUG00000005369) PRKDC (ENSIPUG00000005438) Abcf2-1 (ENSIPUG00000005806) chpf2 (ENSIPUG00000005872) Smarcd3 (ENSIPUG00000005904) NFX1 (ENSIPUG00000005961) Plxdc2 (ENSIPUG00000006018) malrd1 (ENSIPUG00000006079) arl5b (ENSIPUG00000006168) nsun6 (ENSIPUG00000006281) cacnb2 (ENSIPUG00000006349) ENSIPUG00000006447 mrc1 (ENSIPUG00000006475) TMEM236 (ENSIPUG00000006544) hacd1 (ENSIPUG00000006557) ##22 colec12 (ENSIPUG00000006596) tyms (ENSIPUG00000006627) enosf1 (ENSIPUG00000006647) adcyap1a (ENSIPUG00000006776) mettl4 (ENSIPUG00000006797) SMCHD1 (ENSIPUG00000006819) ENSIPUG00000006908 ENSIPUG00000006922 psmb5 (ENSIPUG00000006941) ENSIPUG00000006975 ENSIPUG00000007003 ENSIPUG00000007006 ENSIPUG00000007014 ENSIPUG00000007035 si:ch211-51h9.6 (ENSIPUG00000007053) Characiphysae_b ANCESTRAL SPECIES 64 ENSGT00530000063834.e.a ENSGT00940000155633.D ENSGT01050000244890.a.b.b.d ENSGT00630000089910 ENSGT01050000244857.B.a ENSGT00940000158945.u.a ENSGT00940000156325 ENSGT00440000033408.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786 ENSGT00390000014290 ENSGT00940000154920.bb.a ENSGT00950000183154.b.a.b ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Characoidei ANCESTRAL SPECIES 125 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786 ENSGT00390000014290 ENSGT00940000154920.bb.a ENSGT00950000183154.b.a.b ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Red-bellied piranha MODERN SPECIES 648 ARL5B (ENSPNAG00000008241) NSUN6 (ENSPNAG00000000807) cacnb2a (ENSPNAG00000000797) SLC39A12 (ENSPNAG00000008220) MRC1 (ENSPNAG00000008201) TMEM236 (ENSPNAG00000008177) hacd1 (ENSPNAG00000008164) ##22 COLEC12 (ENSPNAG00000000713) ENSPNAG00000008139 tyms (ENSPNAG00000008135) enosf1 (ENSPNAG00000008121) YES1 (ENSPNAG00000000667) Mexicana tetra MODERN SPECIES 7 malrd1 (ENSAMXG00000006916) plxdc2b (ENSAMXG00000006951) NFX1 (ENSAMXG00000006963) smarcd3b (ENSAMXG00000006986) ENSAMXG00000043849 CHPF2 (ENSAMXG00000006995) abcf2b (ENSAMXG00000007008) ENSAMXG00000037921 PRKDC (ENSAMXG00000007058) garem (ENSAMXG00000007173) ncf2 (ENSAMXG00000007179) dph2 (ENSAMXG00000007185) ENSAMXG00000033306 MRC1 (ENSAMXG00000007199) TMEM236 (ENSAMXG00000007219) hacd1 (ENSAMXG00000039794) ##22 COLEC12 (ENSAMXG00000007230) ENSAMXG00000007236 tyms (ENSAMXG00000007245) enosf1 (ENSAMXG00000007242) YES1 (ENSAMXG00000007250) adcyap1a (ENSAMXG00000007261) METTL4 (ENSAMXG00000002844) SMCHD1 (ENSAMXG00000002900) ENSAMXG00000034441 LPIN2 (ENSAMXG00000031472) ENSAMXG00000043648 ENSAMXG00000036899 ENSAMXG00000037397 ENSAMXG00000042808 ENSAMXG00000017775 Electric eel MODERN SPECIES 1017 MRC1 (ENSEEEG00000009949) hacd1 (ENSEEEG00000009939) ##22 COLEC12 (ENSEEEG00000009935) ENSEEEG00000009932 Cyprinoidei ANCESTRAL SPECIES 218 ENSGT01050000244842.a.a.b.b.a ENSGT00530000062962.a.b ##22 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000158215 ENSGT00390000008250 ENSGT00390000001376 ENSGT00940000157910 ENSGT00940000159823 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 670 ENSGT00940000154242.b.h.c ENSGT00940000156694.n.a.a ENSGT00940000166366 ENSGT01050000244842.a.a.b.b.a ENSGT00530000062962.a.b.c ##22 ENSGT00390000009040 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000158215 ENSGT00390000008250 ENSGT00390000001376 ENSGT00940000157910 ENSGT00940000159823 Cyprininae_a ANCESTRAL SPECIES 94 ENSGT00490000043388.b.b.k ENSGT00940000156304.d.d ENSGT00940000164997.a.b ENSGT00940000153141.B.a.w ENSGT00940000153141.B.a.x.b.a ENSGT00950000183149.A.e ENSGT00940000156731.q.a.c ENSGT00390000001029 ENSGT00940000159246.j ENSGT00390000003248.b.p.a ENSGT00940000164689 ENSGT00940000154242.b.h.c ENSGT00940000156694.n.a.a ENSGT00940000166366 ENSGT01050000244842.a.a.b.b.a ENSGT00530000062962.a.b.c ##22 ENSGT00940000160391.e ENSGT00390000009040 ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000158215 ENSGT00390000008250 ENSGT00390000001376 ENSGT00940000157910 ENSGT00940000159823 Golden-line barbel MODERN SPECIES 1567 hacd1 (ENSSGRG00000017093) ##22 ENSSGRG00000017092 lypla1 (ENSSGRG00000017091) Common carp reference MODERN SPECIES ggh (ENSCCRG00000010915) ENSCCRG00000081572 ENSCCRG00000048452 ENSCCRG00000061304 penkb (ENSCCRG00000050330) sdr16c5b (ENSCCRG00000059225) chchd7 (ENSCCRG00000041163) plag1 (ENSCCRG00000069008) RPS20 (ENSCCRG00000069845) zgc:56231 (ENSCCRG00000052170) ENSCCRG00000056482 ENSCCRG00000068900 ENSCCRG00000060640 ENSCCRG00000017643 ENSCCRG00000073163 hacd1 (ENSCCRG00000079911) ##22 ENSCCRG00000054918 ENSCCRG00000072585 ENSCCRG00000043322 ENSCCRG00000043437 chmp5b (ENSCCRG00000023312) ENSCCRG00000079065 ENSCCRG00000000826 ENSCCRG00000000831 ostc (ENSCCRG00000019644) ENSCCRG00000055408 ENSCCRG00000079467 COL25A1 (ENSCCRG00000079371) ENSCCRG00000075748 ENSCCRG00000056087 ENSCCRG00000062271 Goldfish MODERN SPECIES 2238 penkb (ENSCARG00000058533) sdr16c5b (ENSCARG00000058543) plag1 (ENSCARG00000058551) RPS20 (ENSCARG00000058561) ENSCARG00000058628 sox17 (ENSCARG00000058634) sox32 (ENSCARG00000058639) hacd1 (ENSCARG00000058648) ##22 ENSCARG00000058669 ENSCARG00000058684 mrpl15 (ENSCARG00000058722) FASTKD3 (ENSCARG00000058761) chmp5b (ENSCARG00000058784) DENND4C (ENSCARG00000058984) haus6 (ENSCARG00000060190) ENSCARG00000060352 ostc (ENSCARG00000060359) etnppl (ENSCARG00000060428) ENSCARG00000062744 Cyprininae ANCESTRAL SPECIES ENSGT00530000062962.a.b.d ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00530000062962.a.b.d ##22 Golden-line barbel MODERN SPECIES 1284 ENSSGRG00000052275 ostc (ENSSGRG00000052266) hacd1 (ENSSGRG00000052263) ##22 ENSSGRG00000052262 ENSSGRG00000052260 Zebrafish MODERN SPECIES 22 ASPH (ENSDARG00000078703) sdcbp (ENSDARG00000030097) ENSDARG00000004051 penkb (ENSDARG00000036045) sdr16c5b (ENSDARG00000017794) chchd7 (ENSDARG00000068156) plag1 (ENSDARG00000051926) zgc:56231 (ENSDARG00000010332) sox17 (ENSDARG00000101717) sox32 (ENSDARG00000100591) mrpl15 (ENSDARG00000101306) lypla1 (ENSDARG00000104228) ENSDARG00000110612 MRC1 (ENSDARG00000102100) ENSDARG00000109760 hacd1 (ENSDARG00000103744) ##22 FASTKD3 (ENSDARG00000100440) chmp5b (ENSDARG00000103718) DENND4C (ENSDARG00000102766) haus6 (ENSDARG00000101652) ostc (ENSDARG00000104901) nagk (ENSDARG00000099116) dok1b (ENSDARG00000099177) m1ap (ENSDARG00000099485) SEMA4F (ENSDARG00000100308) slx1b (ENSDARG00000098605) BOLA2 (ENSDARG00000111714) larp7 (ENSDARG00000017315) rpl34 (ENSDARG00000029500) trmt44 (ENSDARG00000033957) ENSDARG00000077645 Euteleosteomorpha ANCESTRAL SPECIES 31 ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00950000183138.a.a.b.u ENSGT00390000005489 ENSGT00730000111180 ENSGT00940000159257 ENSGT00940000162556.B ENSGT00440000033408.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786 ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u Protacanthopterygii ANCESTRAL SPECIES 49 ENSGT00940000160993 ENSGT00940000164390.e ENSGT00950000183138.a.a.b.u ENSGT00390000005489 ENSGT00730000111180 ENSGT00940000159257 ENSGT00940000162556.B ENSGT00440000033408.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786 ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 88 ENSGT00940000164390.e ENSGT00950000183138.a.a.b.u.c.b.b ENSGT00390000005489.d ENSGT00730000111180 ENSGT00940000159257 ENSGT00940000162556.B.d ENSGT00440000033408.a.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370.c ENSGT00950000182837.a.b.a.k ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a.d ENSGT01050000244842.a.a.b.b.a.c ENSGT00390000015525.a.b ENSGT00530000062962.a.b.e ##22 ENSGT00950000183074.A.a.a.b ENSGT00530000063668.A.d ENSGT00390000014786.c ENSGT00940000154920.bb.b.c ENSGT00950000183154.b.a.a.a.b ENSGT00940000167904.b ENSGT00390000016237 ENSGT00390000006950.i ENSGT01030000234633.B.a.c.b ENSGT00940000156313.c.a.b ENSGT00940000154982.c.a ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c.b ENSGT00940000155458.k ENSGT01030000234607.A.a.a.a.c.a Salmoninae_a ANCESTRAL SPECIES 69 ENSGT00940000164390.e ENSGT00950000183138.a.a.b.u.c.b.b ENSGT00390000005489.d ENSGT00730000111180 ENSGT00940000159257 ENSGT00940000162556.B.d ENSGT00440000033408.a.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00950000182996.b.a.a.a.b ENSGT00940000155370.c ENSGT00950000182837.a.b.a.k ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a.c ENSGT00390000015525.a.b ENSGT00530000062962.a.b.e ##22 ENSGT00950000183074.A.a.a.b ENSGT00530000063668.A.d ENSGT00390000014786.c ENSGT00940000154920.bb.b.c ENSGT00950000183154.b.a.a.a.b ENSGT00390000016237 ENSGT00390000006950.i ENSGT01030000234633.B.a.c.b ENSGT00940000156313.c.a.b ENSGT00940000154982.c.a ENSGT00940000155458.k ENSGT01030000234607.A.a.a.a.c.a ENSGT00550000074817.u.e ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.a ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.b Salmo ANCESTRAL SPECIES 34 ENSGT00940000164390.e ENSGT00950000183138.a.a.b.u.c.b.b ENSGT00390000005489.d ENSGT00730000111180 ENSGT00940000159257 ENSGT00940000162556.B.d ENSGT00440000033408.a.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00950000182996.b.a.a.a.b ENSGT00940000155370.c ENSGT00950000182837.a.b.a.k ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a.c ENSGT00390000015525.a.b ENSGT00530000062962.a.b.e ##22 ENSGT00950000183074.A.a.a.b ENSGT00530000063668.A.d ENSGT00390000014786.c ENSGT00940000154920.bb.b.c ENSGT00950000183154.b.a.a.a.b ENSGT00940000167904.b ENSGT00390000016237 ENSGT00390000006950.i ENSGT01030000234633.B.a.c.b ENSGT00940000156313.c.a.b ENSGT00940000154982.c.a ENSGT00940000155458.k ENSGT01030000234607.A.a.a.a.c.a ENSGT00550000074817.u.e ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.a River trout MODERN SPECIES 36 myripb (ENSSTUG00000004935) ENSSTUG00000004930 zfand1 (ENSSTUG00000004890) chmp4c (ENSSTUG00000004876) ENSSTUG00000004860 plxdc2b (ENSSTUG00000004524) malrd1 (ENSSTUG00000003570) ENSSTUG00000003475 arl8 (ENSSTUG00000003450) ENSSTUG00000003428 NSUN6 (ENSSTUG00000003360) CACNB2 (ENSSTUG00000003138) SLC39A12 (ENSSTUG00000003109) MRC1 (ENSSTUG00000000974) TMEM236 (ENSSTUG00000000804) hacd1 (ENSSTUG00000000800) ##22 COLEC12 (ENSSTUG00000000793) CLUL1 (ENSSTUG00000000375) tyms (ENSSTUG00000000198) YES1 (ENSSTUG00000042693) ADCYAP1 (ENSSTUG00000042588) ENSSTUG00000042579 ENSSTUG00000042565 METTL4 (ENSSTUG00000042549) SMCHD1 (ENSSTUG00000041432) EMILIN2 (ENSSTUG00000041395) LPIN2 (ENSSTUG00000040733) MYOM1 (ENSSTUG00000038853) myl12.1 (ENSSTUG00000038805) FASTKD3 (ENSSTUG00000038790) chmp5b (ENSSTUG00000038765) Atlantic salmon MODERN SPECIES 21 ENSSSAG00000070347 ackr4b (ENSSSAG00000119256) ENSSSAG00000070345 ENSSSAG00000070358 zfand1 (ENSSSAG00000070361) ENSSSAG00000070377 plxdc2b (ENSSSAG00000070397) malrd1 (ENSSSAG00000070649) arl8 (ENSSSAG00000108044) ENSSSAG00000070996 NSUN6 (ENSSSAG00000071007) cacnb2a (ENSSSAG00000071149) SLC39A12 (ENSSSAG00000073552) mrc1 (ENSSSAG00000073565) TMEM236 (ENSSSAG00000112518) HACD1 (ENSSSAG00000073829) ##22 COLEC12 (ENSSSAG00000073837) clul1 (ENSSSAG00000073840) tyms (ENSSSAG00000073844) YES1 (ENSSSAG00000073876) ADCYAP1 (ENSSSAG00000074440) ENSSSAG00000074443 mettl4 (ENSSSAG00000074445) SMCHD1 (ENSSSAG00000074510) EMILIN2 (ENSSSAG00000087562) LPIN2 (ENSSSAG00000075262) MYOM1 (ENSSSAG00000076839) myl12.1 (ENSSSAG00000089518) ENSSSAG00000008864 CHMP5 (ENSSSAG00000008886) ENSSSAG00000118600 Oncorhynchus ANCESTRAL SPECIES 27 ENSGT00940000164390.e ENSGT00950000183138.a.a.b.u.c.b.b ENSGT00390000005489.d ENSGT00730000111180.m ENSGT00940000159257 ENSGT00940000162556.B.d ENSGT00440000033408.a.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00950000182996.b.a.a.a.b ENSGT00940000155370.c ENSGT00950000182837.a.b.a.k ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a.c ENSGT00390000015525.a.b ENSGT00530000062962.a.b.e ##22 ENSGT00950000183074.A.a.a.b ENSGT00530000063668.A.d ENSGT00390000014786.c ENSGT00940000154920.bb.b.c ENSGT00950000183154.b.a.a.a.b ENSGT00390000016237 ENSGT00390000006950.i ENSGT01030000234633.B.a.c.b ENSGT00940000156313.c.a.b ENSGT00940000154982.c.a ENSGT00940000155458.k ENSGT01030000234607.A.a.a.a.c.a ENSGT00550000074817.u.f ENSGT00550000074817.u.e ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.a Oncorhynchus_a ANCESTRAL SPECIES 27 ENSGT00940000164390.e ENSGT00950000183138.a.a.b.u.c.b.b ENSGT00390000005489.d ENSGT00730000111180.m ENSGT00940000159257 ENSGT00940000162556.B.d ENSGT00440000033408.a.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00950000182996.b.a.a.a.b ENSGT00940000155370.c ENSGT00950000182837.a.b.a.k ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a.c ENSGT00390000015525.a.b ENSGT00530000062962.a.b.e ##22 ENSGT00950000183074.A.a.a.b ENSGT00530000063668.A.d ENSGT00940000154920.bb.b.c ENSGT00950000183154.b.a.a.a.b ENSGT00390000016237 ENSGT00390000006950.i ENSGT01030000234633.B.a.c.b ENSGT00940000156313.c.a.b ENSGT00940000154982.c.a ENSGT00940000155458.k ENSGT01030000234607.A.a.a.a.c.a ENSGT00550000074817.u.f.b.a ENSGT01090000260029.a.a.a.a.a.a.b.b.b.a.b ENSGT00940000157341.h.c ENSGT00940000159123.b.b Coho salmon MODERN SPECIES 2 myripb (ENSOKIG00005033214) ENSOKIG00005033234 zfand1 (ENSOKIG00005033245) chmp4c (ENSOKIG00005033290) ENSOKIG00005033315 plxdc2b (ENSOKIG00005033358) malrd1 (ENSOKIG00005034117) arl8 (ENSOKIG00005034717) ENSOKIG00005034735 NSUN6 (ENSOKIG00005034747) CACNB2 (ENSOKIG00005035065) ENSOKIG00005038491 SLC39A12 (ENSOKIG00005038526) MRC1 (ENSOKIG00005038628) TMEM236 (ENSOKIG00005040363) HACD1 (ENSOKIG00005040374) ##22 COLEC12 (ENSOKIG00005040408) ENSOKIG00005040436 YES1 (ENSOKIG00005040587) ADCYAP1 (ENSOKIG00005043513) METTL4 (ENSOKIG00005043558) SMCHD1 (ENSOKIG00005043887) EMILIN2 (ENSOKIG00005045397) LPIN2 (ENSOKIG00005045445) MYOM1 (ENSOKIG00005045559) myl12.1 (ENSOKIG00005045988) FASTKD3 (ENSOKIG00005045995) chmp5b (ENSOKIG00005046004) ENSOKIG00005046017 OPRK1 (ENSOKIG00005046038) RGS20 (ENSOKIG00005046049) Rainbow trout MODERN SPECIES 6 ENSOMYG00000021918 myripb (ENSOMYG00000021907) ENSOMYG00000021894 zfand1 (ENSOMYG00000021876) chmp4c (ENSOMYG00000021856) ENSOMYG00000021846 plxdc2b (ENSOMYG00000020625) malrd1 (ENSOMYG00000020351) arl8 (ENSOMYG00000020297) NSUN6 (ENSOMYG00000020288) CACNB2 (ENSOMYG00000020040) ENSOMYG00000077004 SLC39A12 (ENSOMYG00000019964) MRC1 (ENSOMYG00000067787) TMEM236 (ENSOMYG00000017807) HACD1 (ENSOMYG00000018445) ##22 COLEC12 (ENSOMYG00000018421) CLUL1 (ENSOMYG00000018391) tyms (ENSOMYG00000018372) YES1 (ENSOMYG00000017136) ADCYAP1 (ENSOMYG00000017026) METTL4 (ENSOMYG00000023827) SMCHD1 (ENSOMYG00000022813) EMILIN2 (ENSOMYG00000022516) LPIN2 (ENSOMYG00000022219) MYOM1 (ENSOMYG00000021528) myl12.1 (ENSOMYG00000021116) ENSOMYG00000021110 chmp5b (ENSOMYG00000021092) ENSOMYG00000061164 ENSOMYG00000021059 Huchen MODERN SPECIES 506 dmc1 (ENSHHUG00000012217) gspt1 (ENSHHUG00000011817) rsl1d1 (ENSHHUG00000011788) SNX29 (ENSHHUG00000011769) shisa9a (ENSHHUG00000011762) ENSHHUG00000011755 malrd1 (ENSHHUG00000011741) ENSHHUG00000011734 arl8 (ENSHHUG00000011716) NSUN6 (ENSHHUG00000011686) CACNB2 (ENSHHUG00000011384) ENSHHUG00000011358 MRC1 (ENSHHUG00000011331) MRC1 (ENSHHUG00000011291) TMEM236 (ENSHHUG00000011276) hacd1 (ENSHHUG00000011262) ##22 COLEC12 (ENSHHUG00000011244) CLUL1 (ENSHHUG00000011214) tyms (ENSHHUG00000011139) YES1 (ENSHHUG00000010621) ADCYAP1 (ENSHHUG00000010589) Salmoninae ANCESTRAL SPECIES 827 ENSGT00940000155370.d ENSGT00950000182837.a.b.a.l ENSGT00390000015525.a.a ENSGT00530000062962.a.b.f ##22 ENSGT00950000183074.A.a.a.a ENSGT00390000014786.d ENSGT00390000014290 ENSGT00940000154920.bb.b.d ENSGT00950000183154.b.a.a.a.a Huchen MODERN SPECIES 1195 hacd1 (ENSHHUG00000027130) ##22 COLEC12 (ENSHHUG00000027124) tyms (ENSHHUG00000027115) enosf1 (ENSHHUG00000027085) YES1 (ENSHHUG00000024273) ADCYAP1 (ENSHHUG00000024227) Salmoninae_a ANCESTRAL SPECIES 32 ENSGT00940000156220.k.a ENSGT00940000155230.e.a ENSGT00510000049635.d ENSGT00940000156098.a.j ENSGT01100000263537.b.a.a.b.b.b ENSGT00940000156177.f ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a.a ENSGT00950000183138.a.a.b.u.c.b.a ENSGT00390000005489.c ENSGT00940000162556.B.c ENSGT00440000033408.a.a.b ENSGT00940000155370.d ENSGT00950000182837.a.b.a.l ENSGT00390000015525.a.a ENSGT00530000062962.a.b.f ##22 ENSGT00950000183074.A.a.a.a ENSGT00390000014786.d ENSGT00390000014290 ENSGT00940000154920.bb.b.d ENSGT00950000183154.b.a.a.a.a ENSGT00390000006950.j ENSGT01030000234633.B.a.c.a ENSGT00940000156313.c.a.a ENSGT00940000154982.c.b ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c.b Salmo ANCESTRAL SPECIES 3 ENSGT00940000155230.e.a ENSGT00510000049635.d ENSGT00940000156098.a.j ENSGT01100000263537.b.a.a.b.b.b ENSGT00940000156177.f ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a.a ENSGT00950000183138.a.a.b.u.c.a.a ENSGT00950000183138.a.a.b.u.c.b.a ENSGT00390000005489.c ENSGT00940000162556.B.c ENSGT00440000033408.a.a.b ENSGT00940000155370.d ENSGT00950000182837.a.b.a.l ENSGT00390000015525.a.a ENSGT00530000062962.a.b.f ##22 ENSGT00950000183074.A.a.a.a ENSGT00970000193390.c.a.b.a.b ENSGT00390000014786.d ENSGT00390000014290 ENSGT00940000154920.bb.b.d ENSGT00950000183154.b.a.a.a.a ENSGT00390000006950.j ENSGT01030000234633.B.a.c.a ENSGT00940000156313.c.a.a ENSGT00940000154982.c.b ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c.b ENSGT00550000074817.u.f ENSGT00940000157341.h.d ENSGT00940000155605.a.b.a.b River trout MODERN SPECIES 11 DLGAP1 (ENSSTUG00000013317) tgif1 (ENSSTUG00000013424) ENSSTUG00000013432 ENSSTUG00000013475 ENSSTUG00000013604 uba5 (ENSSTUG00000013621) acad11 (ENSSTUG00000013842) ackr4b (ENSSTUG00000014957) ENSSTUG00000014981 myripb (ENSSTUG00000014991) ENSSTUG00000015012 ENSSTUG00000015023 plxdc2b (ENSSTUG00000015057) CACNB2 (ENSSTUG00000015348) ENSSTUG00000015615 hacd1 (ENSSTUG00000015625) ##22 COLEC12 (ENSSTUG00000015645) ENSSTUG00000015659 tyms (ENSSTUG00000015720) enosf1 (ENSSTUG00000015941) YES1 (ENSSTUG00000016247) ADCYAP1 (ENSSTUG00000018253) ENSSTUG00000018286 EMILIN2 (ENSSTUG00000018330) LPIN2 (ENSSTUG00000018452) MYOM1 (ENSSTUG00000019093) MYL12B (ENSSTUG00000020019) ENSSTUG00000020037 chmp5b (ENSSTUG00000020125) OPRK1 (ENSSTUG00000020145) RGS20 (ENSSTUG00000020166) Atlantic salmon MODERN SPECIES 10 ENSSSAG00000092337 tgif1 (ENSSSAG00000101993) ENSSSAG00000061254 ENSSSAG00000061293 ENSSSAG00000108151 ENSSSAG00000062871 ENSSSAG00000061717 ackr4b (ENSSSAG00000063130) ENSSSAG00000063147 ENSSSAG00000063161 ENSSSAG00000063280 PLXDC2 (ENSSSAG00000063291) ENSSSAG00000064158 CACNB2 (ENSSSAG00000064266) ENSSSAG00000070669 ENSSSAG00000070671 ##22 ENSSSAG00000070680 ENSSSAG00000107938 ENSSSAG00000070701 TYMS (ENSSSAG00000070708) enosf1 (ENSSSAG00000070720) YES1 (ENSSSAG00000070866) ADCYAP1 (ENSSSAG00000074062) SMCHD1 (ENSSSAG00000115693) EMILIN2 (ENSSSAG00000074068) LPIN2 (ENSSSAG00000074165) ENSSSAG00000091327 MYOM1 (ENSSSAG00000076408) MLRN (ENSSSAG00000077005) CHMP5 (ENSSSAG00000043519) ENSSSAG00000105068 Oncorhynchus ANCESTRAL SPECIES 28 ENSGT01010000222287.B.a.b.a.l ENSGT00940000164547.b.a.h ENSGT00940000156220.k.a ENSGT00940000155230.e.a ENSGT00510000049635.d ENSGT00940000156098.a.j ENSGT00940000156177.f ENSGT00940000160993.j ENSGT00950000183138.a.a.b.u.c.b.a ENSGT00390000005489.c ENSGT00730000111180.n ENSGT00940000162556.B.c ENSGT00440000033408.a.a.b ENSGT00950000182837.a.b.a.l ENSGT00390000015525.a.a ENSGT00530000062962.a.b.f ##22 ENSGT00950000183074.A.a.a.a ENSGT00390000014786.d ENSGT00390000014290.h ENSGT00940000154920.bb.b.d ENSGT00940000177189.g.b.a ENSGT00950000183154.b.a.a.a.a ENSGT01030000234633.B.a.c.a ENSGT00940000156313.c.a.a ENSGT00940000154982.c.b ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c.b ENSGT00940000157341.h.d ENSGT00940000159123.b.a ENSGT00940000154185.gb ENSGT00390000009040.v.a Oncorhynchus_a ANCESTRAL SPECIES 23 ENSGT01010000222287.B.a.b.a.l ENSGT00940000164547.b.a.h ENSGT00940000156220.k.a ENSGT00940000155230.e.a ENSGT00510000049635.d ENSGT00940000156098.a.j ENSGT00940000156177.f ENSGT00940000160993.j ENSGT00950000183138.a.a.b.u.c.b.a ENSGT00390000005489.c ENSGT00730000111180.n ENSGT00940000162556.B.c ENSGT00440000033408.a.a.b ENSGT00950000182837.a.b.a.l ENSGT00390000015525.a.a ENSGT00530000062962.a.b.f ##22 ENSGT00950000183074.A.a.a.a ENSGT00390000014786.d ENSGT00390000014290.h ENSGT00940000154920.bb.b.d ENSGT00940000177189.g.b.a ENSGT00950000183154.b.a.a.a.a ENSGT01030000234633.B.a.c.a ENSGT00940000156313.c.a.a ENSGT00940000154982.c.b ENSGT00940000153607.a.b ENSGT00550000074817.u.f.b.b ENSGT00940000157341.h.d ENSGT00940000155393.d.tb ENSGT00940000159123.b.a ENSGT00940000154185.gb Coho salmon MODERN SPECIES 9 HTR5A (ENSOKIG00005021908) DLGAP1 (ENSOKIG00005021703) tgif1 (ENSOKIG00005021657) ENSOKIG00005021634 ENSOKIG00005021447 UBA5 (ENSOKIG00005021305) acad11 (ENSOKIG00005021003) myripb (ENSOKIG00005020920) ENSOKIG00005020897 ENSOKIG00005020886 ENSOKIG00005020864 ENSOKIG00005020849 ENSOKIG00005020730 CACNB2 (ENSOKIG00005020455) ENSOKIG00005020391 hacd1 (ENSOKIG00005020384) ##22 COLEC12 (ENSOKIG00005020363) ENSOKIG00005020324 enosf1 (ENSOKIG00005019915) YES1 (ENSOKIG00005017366) ADCYAP1 (ENSOKIG00005017244) ENSOKIG00005017236 LPIN2 (ENSOKIG00005016811) MYOM1 (ENSOKIG00005014404) MYL12B (ENSOKIG00005014279) CHMP5 (ENSOKIG00005014237) OPRK1 (ENSOKIG00005014230) ENSOKIG00005014069 RGS20 (ENSOKIG00005014060) lypla1 (ENSOKIG00005013992) mrpl15 (ENSOKIG00005046173) Chinook salmon MODERN SPECIES 7 fabp4a (ENSOTSG00005044844) DLGAP1 (ENSOTSG00005002169) tgif1 (ENSOTSG00005002774) ENSOTSG00005002778 ENSOTSG00005002786 uba5 (ENSOTSG00005002808) acad11 (ENSOTSG00005003111) ENSOTSG00005005275 ENSOTSG00005005276 plxdc2b (ENSOTSG00005005277) ENSOTSG00005005465 ENSOTSG00005005468 CACNB2 (ENSOTSG00005005494) ENSOTSG00005009361 ENSOTSG00005009362 hacd1 (ENSOTSG00005009363) ##22 COLEC12 (ENSOTSG00005009364) tyms (ENSOTSG00005009365) enosf1 (ENSOTSG00005009401) YES1 (ENSOTSG00005010781) ENSOTSG00005016115 ADCYAP1 (ENSOTSG00005016116) EMILIN2 (ENSOTSG00005016117) LPIN2 (ENSOTSG00005016119) MYOM1 (ENSOTSG00005016265) MYL12B (ENSOTSG00005020423) chmp5b (ENSOTSG00005020426) OPRK1 (ENSOTSG00005020428) ENSOTSG00005020430 lypla1 (ENSOTSG00005020431) mrpl15 (ENSOTSG00005020432) Rainbow trout MODERN SPECIES 2 acad11 (ENSOMYG00000016304) ENSOMYG00000066518 ENSOMYG00000057188 ackr4b (ENSOMYG00000016487) myripb (ENSOMYG00000016491) ENSOMYG00000016529 ENSOMYG00000070983 ENSOMYG00000016706 ENSOMYG00000016710 ENSOMYG00000016744 ENSOMYG00000017553 ENSOMYG00000053091 ENSOMYG00000017623 ENSOMYG00000067642 ENSOMYG00000059945 ENSOMYG00000017816 ##22 ENSOMYG00000017829 ENSOMYG00000031141 ENOSF1 (ENSOMYG00000031240) ENSOMYG00000032040 ENSOMYG00000036469 ADCYAP1 (ENSOMYG00000036507) EMILIN2 (ENSOMYG00000036549) LPIN2 (ENSOMYG00000036690) MYOM1 (ENSOMYG00000037230) mlrn (ENSOMYG00000037517) ENSOMYG00000037533 ENSOMYG00000069577 ENSOMYG00000037506 ENSOMYG00000070848 ENSOMYG00000037559 Northern pike MODERN SPECIES 20 ENSELUG00000022720 ENSELUG00000009421 ENSELUG00000022751 ENSELUG00000022764 ENSELUG00000022773 plxdc2b (ENSELUG00000022871) malrd1 (ENSELUG00000022907) arl8 (ENSELUG00000022956) ENSELUG00000032490 NSUN6 (ENSELUG00000021983) CACNB2 (ENSELUG00000021961) SLC39A12 (ENSELUG00000021899) MRC1 (ENSELUG00000021836) ENSELUG00000032982 TMEM236 (ENSELUG00000008811) hacd1 (ENSELUG00000008798) ##22 ENSELUG00000001430 CLUL1 (ENSELUG00000008673) tyms (ENSELUG00000008633) enosf1 (ENSELUG00000008661) YES1 (ENSELUG00000008554) ADCYAP1 (ENSELUG00000008520) METTL4 (ENSELUG00000008466) SMCHD1 (ENSELUG00000008441) EMILIN2 (ENSELUG00000008396) LPIN2 (ENSELUG00000008377) MYOM1 (ENSELUG00000008339) ENSELUG00000008282 myl12.1 (ENSELUG00000008263) FASTKD3 (ENSELUG00000008158) chmp5 (ENSELUG00000008132) Acanthomorphata ANCESTRAL SPECIES 17 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00390000006896 ENSGT00730000111180 ENSGT00940000159257 ENSGT00940000162556.B ENSGT00440000033408.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786 ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u Euacanthomorphacea ANCESTRAL SPECIES 16 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00390000006896 ENSGT00730000111180 ENSGT00940000159257 ENSGT00940000162556.B ENSGT00440000033408.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786 ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u Percomorphaceae ANCESTRAL SPECIES 28 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786 ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u Tiger tail seahorse MODERN SPECIES 77 arl8 (ENSHCOG00000015779) NSUN6 (ENSHCOG00000015758) cacnb2a (ENSHCOG00000015727) ENSHCOG00000015699 MRC1 (ENSHCOG00000015686) TMEM236 (ENSHCOG00000015675) hacd1 (ENSHCOG00000015665) ##22 cdv3 (ENSHCOG00000015632) scrib (ENSHCOG00000015612) puf60b (ENSHCOG00000015541) nrbp2b (ENSHCOG00000015532) ENSHCOG00000015499 ENSHCOG00000015493 slc4a2b (ENSHCOG00000015481) ENSHCOG00000015431 eif2s3 (ENSHCOG00000015356) klhl15 (ENSHCOG00000015329) ENSHCOG00000015308 sat1b (ENSHCOG00000000423) acot9.2 (ENSHCOG00000015275) ENSHCOG00000015159 TNIK (ENSHCOG00000015118) Percomorphaceae_B ANCESTRAL SPECIES 20 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u Percomorphaceae_C ANCESTRAL SPECIES 21 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00990000210289 ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Eupercaria ANCESTRAL SPECIES 20 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00990000210289 ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Tetraodontidae ANCESTRAL SPECIES 18 ENSGT00490000043432 ENSGT00940000156086.d ENSGT00390000013743 ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b Fugu MODERN SPECIES 1 ube3c (ENSTRUG00000009905) dnajb6b (ENSTRUG00000009824) ptprn2 (ENSTRUG00000009798) ncapg2 (ENSTRUG00000021691) plxdc2b (ENSTRUG00000008838) ENSTRUG00000027708 chmp4c (ENSTRUG00000008663) zfand1 (ENSTRUG00000008606) maf1b (ENSTRUG00000025393) arl5b (ENSTRUG00000028160) NSUN6 (ENSTRUG00000008314) cacnb2a (ENSTRUG00000007932) SLC39A12 (ENSTRUG00000007740) MRC1 (ENSTRUG00000007315) TMEM236 (ENSTRUG00000007274) hacd1 (ENSTRUG00000007061) ##22 COLEC12 (ENSTRUG00000006852) ENSTRUG00000027319 tyms (ENSTRUG00000002155) YES1 (ENSTRUG00000003054) EMILIN2 (ENSTRUG00000003983) LPIN2 (ENSTRUG00000004278) ENSTRUG00000011112 FASTKD3 (ENSTRUG00000006808) OPRK1 (ENSTRUG00000007104) ENSTRUG00000007273 lypla1 (ENSTRUG00000007339) mrpl15 (ENSTRUG00000007522) sox32 (ENSTRUG00000007604) sox17 (ENSTRUG00000007618) ENSTRUG00000032813 Eupecaria_A ANCESTRAL SPECIES 19 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00990000210289 ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290.b ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Ballan wrasse MODERN SPECIES 284 ENSLBEG00000017541 ENSLBEG00000017497 kbtbd2 (ENSLBEG00000017461) avl9 (ENSLBEG00000017406) LSM5 (ENSLBEG00000017379) psme2 (ENSLBEG00000017320) chmp4c (ENSLBEG00000017281) zfand1 (ENSLBEG00000017229) maf1b (ENSLBEG00000017190) arl8 (ENSLBEG00000017173) NSUN6 (ENSLBEG00000017133) cacnb2a (ENSLBEG00000017022) SLC39A12 (ENSLBEG00000016927) ENSLBEG00000016858 TMEM236 (ENSLBEG00000016829) hacd1 (ENSLBEG00000016812) ##22 COLEC12 (ENSLBEG00000016793) CLUL1 (ENSLBEG00000016753) tyms (ENSLBEG00000016708) enosf1 (ENSLBEG00000016626) YES1 (ENSLBEG00000016096) ADCYAP1 (ENSLBEG00000015916) Eupecaria_B ANCESTRAL SPECIES 19 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00990000210289 ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290.b ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Eupecaria_C ANCESTRAL SPECIES 19 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290.b ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Eupercaria_incertae_sedis ANCESTRAL SPECIES 17 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290.b ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Large yellow croaker MODERN SPECIES 494 DYNC2I1 (ENSLCRG00005022851) ENSLCRG00005022850 ENSLCRG00005022848 malrd1 (ENSLCRG00005022840) plxdc2b (ENSLCRG00005022827) ENSLCRG00005022825 chmp4c (ENSLCRG00005022824) zfand1 (ENSLCRG00005022822) maf1b (ENSLCRG00005022821) arl8 (ENSLCRG00005022820) NSUN6 (ENSLCRG00005022818) cacnb2a (ENSLCRG00005022815) SLC39A12 (ENSLCRG00005022810) MRC1 (ENSLCRG00005022335) TMEM236 (ENSLCRG00005022281) hacd1 (ENSLCRG00005022280) ##22 ENSLCRG00005022279 CLUL1 (ENSLCRG00005022277) tyms (ENSLCRG00005022270) enosf1 (ENSLCRG00005022105) ADCYAP1 (ENSLCRG00005022101) YES1 (ENSLCRG00005022084) METTL4 (ENSLCRG00005022076) SMCHD1 (ENSLCRG00005022050) EMILIN2 (ENSLCRG00005022041) LPIN2 (ENSLCRG00005021941) MYOM1 (ENSLCRG00005021839) ENSLCRG00005021833 FASTKD3 (ENSLCRG00005021832) chmp5b (ENSLCRG00005021831) OPRK1 (ENSLCRG00005021829) European seabass MODERN SPECIES 8 ENSDLAG00005012493 ENSDLAG00005033205 ENSDLAG00005012527 ENSDLAG00005013029 ENSDLAG00005013363 ENSDLAG00005030807 ZFAND1 (ENSDLAG00005033862) ARL5B (ENSDLAG00005013449) NSUN6 (ENSDLAG00005033054) CACNB2 (ENSDLAG00005013589) ENSDLAG00005027760 ENSDLAG00005033852 SLC39A12 (ENSDLAG00005016066) MRC1 (ENSDLAG00005016127) TMEM236 (ENSDLAG00005030344) HACD1 (ENSDLAG00005018856) ##22 COLEC12 (ENSDLAG00005018862) CLUL1 (ENSDLAG00005018881) tyms (ENSDLAG00005018900) ENOSF1 (ENSDLAG00005018953) YES1 (ENSDLAG00005019225) ADCYAP1 (ENSDLAG00005019829) METTL4 (ENSDLAG00005019846) SMCHD1 (ENSDLAG00005019865) EMILIN2 (ENSDLAG00005020280) LPIN2 (ENSDLAG00005020298) MYOM1 (ENSDLAG00005020579) myl12.1 (ENSDLAG00005021974) ENSDLAG00005021782 CHMP5 (ENSDLAG00005026401) ENSDLAG00005027177 Gilthead seabream MODERN SPECIES 10 ENSSAUG00010013114 ENSSAUG00010013113 ENSSAUG00010013111 malrd1 (ENSSAUG00010013060) plxdc2b (ENSSAUG00010012582) ENSSAUG00010012572 zfand1 (ENSSAUG00010012570) chmp4c (ENSSAUG00010012566) maf1b (ENSSAUG00010012565) arl8 (ENSSAUG00010012560) NSUN6 (ENSSAUG00010012557) cacnb2a (ENSSAUG00010012021) SLC39A12 (ENSSAUG00010011991) MRC1 (ENSSAUG00010011496) TMEM236 (ENSSAUG00010011477) hacd1 (ENSSAUG00010011474) ##22 COLEC12 (ENSSAUG00010011469) CLUL1 (ENSSAUG00010011463) tyms (ENSSAUG00010011461) enosf1 (ENSSAUG00010011390) YES1 (ENSSAUG00010009020) PRP-PACAP (ENSSAUG00010008992) METTL4 (ENSSAUG00010008990) SMCHD1 (ENSSAUG00010007948) EMILIN2 (ENSSAUG00010007931) LPIN2 (ENSSAUG00010007842) MYOM1 (ENSSAUG00010002943) myl12.1 (ENSSAUG00010002678) FASTKD3 (ENSSAUG00010002671) chmp5b (ENSSAUG00010002659) OPRK1 (ENSSAUG00010002649) Perciformes ANCESTRAL SPECIES 21 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00990000210289 ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290.b ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Cottioidei ANCESTRAL SPECIES 21 ENSGT00390000013743 ENSGT01030000234531.B ENSGT00990000210289 ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290.b ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Stickleback MODERN SPECIES 20 DYNC2I1 (ENSGACG00000003976) ENSGACG00000003991 malrd1 (ENSGACG00000003994) ENSGACG00000004002 PLXDC2 (ENSGACG00000004008) ENSGACG00000004019 chmp4c (ENSGACG00000004022) zfand1 (ENSGACG00000004034) maf1b (ENSGACG00000004036) arl8 (ENSGACG00000004052) NSUN6 (ENSGACG00000004059) cacnb2a (ENSGACG00000004067) SLC39A12 (ENSGACG00000004075) MRC1 (ENSGACG00000004079) TMEM236 (ENSGACG00000004092) hacd1 (ENSGACG00000004096) ##22 COLEC12 (ENSGACG00000004102) CLUL1 (ENSGACG00000004107) tyms (ENSGACG00000004111) enosf1 (ENSGACG00000004128) YES1 (ENSGACG00000004157) ADCYAP1 (ENSGACG00000004163) METTL4 (ENSGACG00000004176) ENSGACG00000004182 SMCHD1 (ENSGACG00000004186) EMILIN2 (ENSGACG00000004197) LPIN2 (ENSGACG00000004201) MYOM1 (ENSGACG00000004209) MYL12B (ENSGACG00000004252) FASTKD3 (ENSGACG00000004261) chmp5b (ENSGACG00000004275) Lumpfish MODERN SPECIES 12 ENSCLMG00005021962 ENSCLMG00005021960 malrd1 (ENSCLMG00005021959) PLXDC2 (ENSCLMG00005021956) ENSCLMG00005021955 chmp4c (ENSCLMG00005021954) zfand1 (ENSCLMG00005021950) maf1b (ENSCLMG00005021949) arl8 (ENSCLMG00005021946) NSUN6 (ENSCLMG00005021942) cacnb2a (ENSCLMG00005021920) ENSCLMG00005021918 ENSCLMG00005021916 MRC1 (ENSCLMG00005021911) TMEM236 (ENSCLMG00005021907) hacd1 (ENSCLMG00005021902) ##22 ENSCLMG00005021901 COLEC12 (ENSCLMG00005021883) ENSCLMG00005021880 CLUL1 (ENSCLMG00005021879) tyms (ENSCLMG00005021878) enosf1 (ENSCLMG00005021863) YES1 (ENSCLMG00005020789) ADCYAP1 (ENSCLMG00005020762) METTL4 (ENSCLMG00005020755) SMCHD1 (ENSCLMG00005020475) EMILIN2 (ENSCLMG00005020470) LPIN2 (ENSCLMG00005019319) MYOM1 (ENSCLMG00005019225) myl12.1 (ENSCLMG00005019219) FASTKD3 (ENSCLMG00005019217) Perciformes_a ANCESTRAL SPECIES 22 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290.b ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Channel bull blenny MODERN SPECIES 12 DYNC2I1 (ENSCGOG00000005261) ENSCGOG00000005267 ENSCGOG00000005270 malrd1 (ENSCGOG00000005273) plxdc2b (ENSCGOG00000005290) ENSCGOG00000005497 chmp4c (ENSCGOG00000005500) zfand1 (ENSCGOG00000005505) maf1b (ENSCGOG00000005509) arl8 (ENSCGOG00000005523) NSUN6 (ENSCGOG00000005536) cacnb2a (ENSCGOG00000005583) SLC39A12 (ENSCGOG00000006307) MRC1 (ENSCGOG00000006322) TMEM236 (ENSCGOG00000006761) hacd1 (ENSCGOG00000006762) ##22 COLEC12 (ENSCGOG00000006763) ENSCGOG00000006767 CLUL1 (ENSCGOG00000006768) tyms (ENSCGOG00000006776) enosf1 (ENSCGOG00000006883) YES1 (ENSCGOG00000007440) ADCYAP1 (ENSCGOG00000014718) METTL4 (ENSCGOG00000014729) SMCHD1 (ENSCGOG00000014733) EMILIN2 (ENSCGOG00000014871) LPIN2 (ENSCGOG00000014886) MYOM1 (ENSCGOG00000016666) myl12.1 (ENSCGOG00000017811) FASTKD3 (ENSCGOG00000017819) chmp5b (ENSCGOG00000017831) Pike perch MODERN SPECIES 94 DYNC2I1 (ENSSLUG00000013329) ENSSLUG00000013323 ENSSLUG00000013320 malrd1 (ENSSLUG00000013301) plxdc2b (ENSSLUG00000013189) ENSSLUG00000013178 chmp4c (ENSSLUG00000024274) zfand1 (ENSSLUG00000024266) maf1b (ENSSLUG00000024258) arl8 (ENSSLUG00000024251) NSUN6 (ENSSLUG00000024243) cacnb2a (ENSSLUG00000024183) SLC39A12 (ENSSLUG00000024158) MRC1 (ENSSLUG00000023957) TMEM236 (ENSSLUG00000023903) hacd1 (ENSSLUG00000023899) ##22 COLEC12 (ENSSLUG00000023895) ENSSLUG00000023887 tyms (ENSSLUG00000023872) enosf1 (ENSSLUG00000023553) YES1 (ENSSLUG00000022296) ADCYAP1 (ENSSLUG00000022157) METTL4 (ENSSLUG00000022134) SMCHD1 (ENSSLUG00000021722) EMILIN2 (ENSSLUG00000021617) LPIN2 (ENSSLUG00000021324) MYOM1 (ENSSLUG00000020557) ENSSLUG00000020395 FASTKD3 (ENSSLUG00000020391) chmp5b (ENSSLUG00000020380) OPRK1 (ENSSLUG00000020365) Percomorphaceae_D ANCESTRAL SPECIES 21 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00990000210289 ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Anabantaria ANCESTRAL SPECIES 22 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00990000210289 ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Zig-zag eel MODERN SPECIES 12 ENSMAMG00000004630 ENSMAMG00000004667 ENSMAMG00000026354 ENSMAMG00000004678 ENSMAMG00000004758 ENSMAMG00000004795 ENSMAMG00000004804 zfand1 (ENSMAMG00000004825) ENSMAMG00000004840 ARL5B (ENSMAMG00000004884) NSUN6 (ENSMAMG00000004915) CACNB2 (ENSMAMG00000004958) ENSMAMG00000005033 MRC1 (ENSMAMG00000005063) TMEM236 (ENSMAMG00000005095) HACD1 (ENSMAMG00000005113) ##22 ENSMAMG00000005157 tyms (ENSMAMG00000026111) ENOSF1 (ENSMAMG00000005232) YES1 (ENSMAMG00000005280) ADCYAP1 (ENSMAMG00000005315) METTL4 (ENSMAMG00000005327) SMCHD1 (ENSMAMG00000005337) EMILIN2 (ENSMAMG00000005417) LPIN2 (ENSMAMG00000005446) MYOM1 (ENSMAMG00000005516) ENSMAMG00000025971 ENSMAMG00000005577 KPNA1 (ENSMAMG00000026045) ENSMAMG00000005645 mix23 (ENSMAMG00000005663) Anabantoidei ANCESTRAL SPECIES 20 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Climbing perch MODERN SPECIES 11 DYNC2I1 (ENSATEG00000004921) ENSATEG00000004843 ENSATEG00000004836 ENSATEG00000004748 ENSATEG00000004742 ENSATEG00000004731 ENSATEG00000004721 zfand1 (ENSATEG00000004687) ENSATEG00000004656 ARL5B (ENSATEG00000004632) NSUN6 (ENSATEG00000004585) CACNB2 (ENSATEG00000004521) SLC39A12 (ENSATEG00000029283) MRC1 (ENSATEG00000004479) TMEM236 (ENSATEG00000004443) HACD1 (ENSATEG00000004413) ##22 COLEC12 (ENSATEG00000004404) CLUL1 (ENSATEG00000004358) tyms (ENSATEG00000004331) ENOSF1 (ENSATEG00000004238) YES1 (ENSATEG00000004191) ADCYAP1 (ENSATEG00000003918) METTL4 (ENSATEG00000003905) SMCHD1 (ENSATEG00000003580) EMILIN2 (ENSATEG00000003547) LPIN2 (ENSATEG00000003541) MYOM1 (ENSATEG00000003376) MYL12B (ENSATEG00000003352) ENSATEG00000003307 ENSATEG00000003315 ENSATEG00000002927 Siamese fighting fish MODERN SPECIES 15 ptprn2 (ENSBSLG00000001696) ncapg2 (ENSBSLG00000001796) ESYT2 (ENSBSLG00000001916) plxdc2b (ENSBSLG00000002060) malrd1 (ENSBSLG00000002348) ENSBSLG00000002879 chmp4c (ENSBSLG00000002920) zfand1 (ENSBSLG00000002936) maf1b (ENSBSLG00000002945) arl8 (ENSBSLG00000002953) NSUN6 (ENSBSLG00000002957) CACNB2 (ENSBSLG00000003950) SLC39A12 (ENSBSLG00000004348) MRC1 (ENSBSLG00000004360) TMEM236 (ENSBSLG00000004446) hacd1 (ENSBSLG00000004448) ##22 COLEC12 (ENSBSLG00000004831) tyms (ENSBSLG00000005117) enosf1 (ENSBSLG00000005249) YES1 (ENSBSLG00000005668) ADCYAP1 (ENSBSLG00000006138) METTL4 (ENSBSLG00000006313) SMCHD1 (ENSBSLG00000006431) SMCHD1 (ENSBSLG00000006737) SMCHD1 (ENSBSLG00000006972) EMILIN2 (ENSBSLG00000007099) LPIN2 (ENSBSLG00000007133) MYOM1 (ENSBSLG00000007221) ENSBSLG00000007317 ENSBSLG00000007723 ENSBSLG00000007775 Carangaria ANCESTRAL SPECIES 21 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Pleuronectoidei ANCESTRAL SPECIES 12 ENSGT00940000156086.d ENSGT00390000013743 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b Turbot MODERN SPECIES 13 DYNC2I1 (ENSSMAG00000011379) ENSSMAG00000011447 ENSSMAG00000011469 ENSSMAG00000011518 ENSSMAG00000011499 ENSSMAG00000011524 ENSSMAG00000036927 zfand1 (ENSSMAG00000011535) ENSSMAG00000011548 ARL5B (ENSSMAG00000011578) NSUN6 (ENSSMAG00000011608) CACNB2 (ENSSMAG00000011644) SLC39A12 (ENSSMAG00000011849) MRC1 (ENSSMAG00000011882) TMEM236 (ENSSMAG00000011958) HACD1 (ENSSMAG00000011969) ##22 ENSSMAG00000011987 Tongue sole MODERN SPECIES 13 ENSCSEG00000000573 ENSCSEG00000000563 tlr22 (ENSCSEG00000000559) ENSCSEG00000000554 MAP3K15 (ENSCSEG00000000538) ENSCSEG00000000536 chmp4c (ENSCSEG00000000534) zfand1 (ENSCSEG00000000531) maf1b (ENSCSEG00000000526) arl8 (ENSCSEG00000000522) NSUN6 (ENSCSEG00000000514) cacnb2a (ENSCSEG00000000509) SLC39A12 (ENSCSEG00000000503) MRC1 (ENSCSEG00000000463) TMEM236 (ENSCSEG00000000454) hacd1 (ENSCSEG00000000449) ##22 ENSCSEG00000000426 tyms (ENSCSEG00000000420) enosf1 (ENSCSEG00000000400) YES1 (ENSCSEG00000000393) ADCYAP1 (ENSCSEG00000000388) METTL4 (ENSCSEG00000000384) SMCHD1 (ENSCSEG00000000365) EMILIN2 (ENSCSEG00000000350) LPIN2 (ENSCSEG00000000331) MYOM1 (ENSCSEG00000000297) MYL12B (ENSCSEG00000000261) FASTKD3 (ENSCSEG00000000255) chmp5b (ENSCSEG00000000253) OPRK1 (ENSCSEG00000000251) ENSCSEG00000000250 Carangaria_A ANCESTRAL SPECIES 15 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h.b Seriola ANCESTRAL SPECIES 27 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h.b Greater amberjack MODERN SPECIES 217 DYNC2I1 (ENSSDUG00000007283) ENSSDUG00000007350 ENSSDUG00000007367 malrd1 (ENSSDUG00000007382) plxdc2b (ENSSDUG00000007424) ENSSDUG00000007450 chmp4c (ENSSDUG00000007461) zfand1 (ENSSDUG00000007473) maf1b (ENSSDUG00000007489) arl8 (ENSSDUG00000007515) NSUN6 (ENSSDUG00000007541) cacnb2a (ENSSDUG00000007603) SLC39A12 (ENSSDUG00000007638) MRC1 (ENSSDUG00000007670) TMEM236 (ENSSDUG00000007784) hacd1 (ENSSDUG00000007796) ##22 COLEC12 (ENSSDUG00000007806) CLUL1 (ENSSDUG00000007823) tyms (ENSSDUG00000007843) enosf1 (ENSSDUG00000007876) YES1 (ENSSDUG00000007935) ADCYAP1 (ENSSDUG00000007990) METTL4 (ENSSDUG00000008018) SMCHD1 (ENSSDUG00000008107) EMILIN2 (ENSSDUG00000008173) LPIN2 (ENSSDUG00000008211) MYOM1 (ENSSDUG00000008284) FASTKD3 (ENSSDUG00000008377) ENSSDUG00000008469 chmp5b (ENSSDUG00000008690) OPRK1 (ENSSDUG00000008713) Yellowtail amberjack MODERN SPECIES 3001 ENSSLDG00000021554 ENSSLDG00000021541 ENSSLDG00000021534 malrd1 (ENSSLDG00000021489) plxdc2b (ENSSLDG00000021458) ENSSLDG00000021446 chmp4c (ENSSLDG00000021437) zfand1 (ENSSLDG00000021422) maf1b (ENSSLDG00000021397) arl8 (ENSSLDG00000021379) NSUN6 (ENSSLDG00000021347) cacnb2a (ENSSLDG00000021222) SLC39A12 (ENSSLDG00000021181) MRC1 (ENSSLDG00000021144) TMEM236 (ENSSLDG00000021124) hacd1 (ENSSLDG00000021113) ##22 COLEC12 (ENSSLDG00000021086) CLUL1 (ENSSLDG00000021076) tyms (ENSSLDG00000021053) enosf1 (ENSSLDG00000021023) YES1 (ENSSLDG00000020989) ADCYAP1 (ENSSLDG00000020973) Barramundi perch MODERN SPECIES 254 ENSLCAG00010005071 ENSLCAG00010005066 MRC1 (ENSLCAG00010005099) TMEM236 (ENSLCAG00010005190) hacd1 (ENSLCAG00010005195) ##22 COLEC12 (ENSLCAG00010005201) CLUL1 (ENSLCAG00010005204) tyms (ENSLCAG00010005209) enosf1 (ENSLCAG00010005245) YES1 (ENSLCAG00010005405) ADCYAP1 (ENSLCAG00010005446) METTL4 (ENSLCAG00010005451) SMCHD1 (ENSLCAG00010005504) EMILIN2 (ENSLCAG00010005723) LPIN2 (ENSLCAG00010005737) MYOM1 (ENSLCAG00010005895) ENSLCAG00010006181 FASTKD3 (ENSLCAG00010006215) chmp5b (ENSLCAG00010006227) OPRK1 (ENSLCAG00010006238) Ovalentaria ANCESTRAL SPECIES 21 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u Atherinomorphae ANCESTRAL SPECIES 19 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u Cyprinodontiformes ANCESTRAL SPECIES 20 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u Aplocheiloidei ANCESTRAL SPECIES 18 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h ENSGT00940000159123.b Mangrove rivulus MODERN SPECIES 7 DYNC2I1 (ENSKMAG00000013214) ENSKMAG00000013254 ENSKMAG00000013332 malrd1 (ENSKMAG00000013362) plxdc2b (ENSKMAG00000013446) ENSKMAG00000013472 chmp4c (ENSKMAG00000013490) zfand1 (ENSKMAG00000013519) maf1b (ENSKMAG00000013552) arl8 (ENSKMAG00000013576) NSUN6 (ENSKMAG00000013611) cacnb2a (ENSKMAG00000013687) ENSKMAG00000013817 MRC1 (ENSKMAG00000013862) TMEM236 (ENSKMAG00000014019) hacd1 (ENSKMAG00000014041) ##22 COLEC12 (ENSKMAG00000014072) tyms (ENSKMAG00000014156) enosf1 (ENSKMAG00000014103) YES1 (ENSKMAG00000014196) ADCYAP1 (ENSKMAG00000014233) METTL4 (ENSKMAG00000014329) SMCHD1 (ENSKMAG00000014502) EMILIN2 (ENSKMAG00000014834) LPIN2 (ENSKMAG00000014888) MYOM1 (ENSKMAG00000014989) myl12.1 (ENSKMAG00000015085) FASTKD3 (ENSKMAG00000015153) chmp5b (ENSKMAG00000015178) OPRK1 (ENSKMAG00000015223) RGS20 (ENSKMAG00000015246) Turquoise killifish MODERN SPECIES 1617 DYNC2I1 (ENSNFUG00015017498) PRAME (ENSNFUG00015017514) malrd1 (ENSNFUG00015017561) ENSNFUG00015017963 plxdc2b (ENSNFUG00015017987) CR753886.1 (ENSNFUG00015018888) chmp4c (ENSNFUG00015018895) ZFAND1 (ENSNFUG00015018898) MAF1 (ENSNFUG00015018902) ARL8 (ENSNFUG00015018907) NSUN6 (ENSNFUG00015018911) cacnb2a (ENSNFUG00015018963) ENSNFUG00015019654 ENSNFUG00015019660 TMEM236 (ENSNFUG00015005731) PTPLA (ENSNFUG00015005735) ##22 COLEC12 (ENSNFUG00015005741) tyms (ENSNFUG00015005744) YES1 (ENSNFUG00015005781) ADCYAP1 (ENSNFUG00015005898) METTL4 (ENSNFUG00015005902) SMCHD1 (ENSNFUG00015005913) EMILIN2 (ENSNFUG00015006065) LPIN2 (ENSNFUG00015006120) MYOM1 (ENSNFUG00015006290) MRPL15 (ENSNFUG00015006382) MYL12.2 (ENSNFUG00015006405) FASTKD3 (ENSNFUG00015006421) CHMP5B (ENSNFUG00015006435) OPRK1 (ENSNFUG00015006448) RGS20 (ENSNFUG00015006452) Cyprinodontoidei ANCESTRAL SPECIES 27 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950.a ENSGT00390000006950.b ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c Poeciliinae ANCESTRAL SPECIES 20 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950.a.b ENSGT00390000006950.b ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u Poecilia ANCESTRAL SPECIES 17 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950.a.b ENSGT00390000006950.b ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u NAME_6 ANCESTRAL SPECIES 22 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950.a.b Amazon molly MODERN SPECIES 322 DYNC2I1 (ENSPFOG00000016281) ENSPFOG00000022353 ENSPFOG00000016383 malrd1 (ENSPFOG00000016393) plxdc2b (ENSPFOG00000016424) ENSPFOG00000020910 chmp4c (ENSPFOG00000016521) zfand1 (ENSPFOG00000016561) maf1b (ENSPFOG00000016589) arl8 (ENSPFOG00000016633) NSUN6 (ENSPFOG00000016647) cacnb2a (ENSPFOG00000016676) SLC39A12 (ENSPFOG00000016737) MRC1 (ENSPFOG00000016777) TMEM236 (ENSPFOG00000016853) hacd1 (ENSPFOG00000016855) ##22 COLEC12 (ENSPFOG00000016874) CLUL1 (ENSPFOG00000016898) tyms (ENSPFOG00000024833) enosf1 (ENSPFOG00000016920) YES1 (ENSPFOG00000016976) ADCYAP1 (ENSPFOG00000017025) METTL4 (ENSPFOG00000017039) SMCHD1 (ENSPFOG00000017090) Sailfin molly MODERN SPECIES 59 ESYT2 (ENSPLAG00000022174) DYNC2I1 (ENSPLAG00000022109) ENSPLAG00000022077 malrd1 (ENSPLAG00000022062) plxdc2b (ENSPLAG00000021975) ENSPLAG00000021875 chmp4c (ENSPLAG00000021863) zfand1 (ENSPLAG00000021845) maf1b (ENSPLAG00000021839) arl8 (ENSPLAG00000021807) NSUN6 (ENSPLAG00000021785) cacnb2a (ENSPLAG00000021743) SLC39A12 (ENSPLAG00000021701) MRC1 (ENSPLAG00000021656) TMEM236 (ENSPLAG00000021288) hacd1 (ENSPLAG00000021275) ##22 COLEC12 (ENSPLAG00000021254) ENSPLAG00000021244 ENSPLAG00000021225 tyms (ENSPLAG00000021177) enosf1 (ENSPLAG00000021154) YES1 (ENSPLAG00000021087) ADCYAP1 (ENSPLAG00000021046) METTL4 (ENSPLAG00000021017) SMCHD1 (ENSPLAG00000021002) Guppy MODERN SPECIES 451 ESYT2 (ENSPREG00000008606) DYNC2I1 (ENSPREG00000008539) ENSPREG00000008511 malrd1 (ENSPREG00000008442) plxdc2b (ENSPREG00000008370) ENSPREG00000008358 chmp4c (ENSPREG00000008339) zfand1 (ENSPREG00000008291) maf1b (ENSPREG00000008276) arl8 (ENSPREG00000008262) NSUN6 (ENSPREG00000008237) cacnb2a (ENSPREG00000008213) ENSPREG00000008198 MRC1 (ENSPREG00000007950) TMEM236 (ENSPREG00000007897) hacd1 (ENSPREG00000007878) ##22 COLEC12 (ENSPREG00000007763) ENSPREG00000007709 tyms (ENSPREG00000007696) enosf1 (ENSPREG00000007659) YES1 (ENSPREG00000007632) ADCYAP1 (ENSPREG00000007560) METTL4 (ENSPREG00000007501) SMCHD1 (ENSPREG00000007428) SMCHD1 (ENSPREG00000007336) EMILIN2 (ENSPREG00000007309) LPIN2 (ENSPREG00000007247) MYOM1 (ENSPREG00000006914) ENSPREG00000006845 FASTKD3 (ENSPREG00000006765) chmp5b (ENSPREG00000006727) Platyfish MODERN SPECIES 13 DYNC2I1 (ENSXMAG00000002350) ENSXMAG00000029720 ENSXMAG00000002340 malrd1 (ENSXMAG00000002333) plxdc2b (ENSXMAG00000002321) ENSXMAG00000002320 chmp4c (ENSXMAG00000002311) zfand1 (ENSXMAG00000002307) maf1b (ENSXMAG00000002299) arl8 (ENSXMAG00000002296) NSUN6 (ENSXMAG00000002289) cacnb2a (ENSXMAG00000002276) SLC39A12 (ENSXMAG00000002274) MRC1 (ENSXMAG00000002252) ENSXMAG00000026213 hacd1 (ENSXMAG00000002244) ##22 COLEC12 (ENSXMAG00000002243) ENSXMAG00000024995 tyms (ENSXMAG00000002236) enosf1 (ENSXMAG00000002232) YES1 (ENSXMAG00000002221) ADCYAP1 (ENSXMAG00000002216) METTL4 (ENSXMAG00000002213) SMCHD1 (ENSXMAG00000002193) SMCHD1 (ENSXMAG00000002190) EMILIN2 (ENSXMAG00000002184) LPIN2 (ENSXMAG00000002157) MYOM1 (ENSXMAG00000002124) ENSXMAG00000002121 FASTKD3 (ENSXMAG00000002108) chmp5b (ENSXMAG00000002110) NAME_4 ANCESTRAL SPECIES 38 ENSGT00940000156086.d ENSGT00390000013743 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950.a ENSGT00390000006950.b ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000156313.d ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c Mummichog MODERN SPECIES 528 ESYT2 (ENSFHEG00000015809) DYNC2I1 (ENSFHEG00000015536) malrd1 (ENSFHEG00000000895) plxdc2b (ENSFHEG00000015430) ENSFHEG00000014637 chmp4c (ENSFHEG00000014630) zfand1 (ENSFHEG00000014607) maf1b (ENSFHEG00000014595) ARL5B (ENSFHEG00000014538) arl8 (ENSFHEG00000014532) NSUN6 (ENSFHEG00000014522) cacnb2a (ENSFHEG00000014381) SLC39A12 (ENSFHEG00000012581) MRC1 (ENSFHEG00000012571) TMEM236 (ENSFHEG00000012504) hacd1 (ENSFHEG00000012481) ##22 COLEC12 (ENSFHEG00000012461) ENSFHEG00000012449 tyms (ENSFHEG00000012321) enosf1 (ENSFHEG00000012304) YES1 (ENSFHEG00000012200) ADCYAP1 (ENSFHEG00000012163) METTL4 (ENSFHEG00000012147) SMCHD1 (ENSFHEG00000012133) SMCHD1 (ENSFHEG00000012020) EMILIN2 (ENSFHEG00000011941) LPIN2 (ENSFHEG00000011937) ENSFHEG00000011894 MYOM1 (ENSFHEG00000011880) ENSFHEG00000011787 FASTKD3 (ENSFHEG00000011778) Sheepshead minnow MODERN SPECIES 266 ESYT2 (ENSCVAG00000007220) DYNC2I1 (ENSCVAG00000007142) ENSCVAG00000007095 malrd1 (ENSCVAG00000007078) plxdc2b (ENSCVAG00000007015) ENSCVAG00000006961 chmp4c (ENSCVAG00000006956) zfand1 (ENSCVAG00000006940) maf1b (ENSCVAG00000006926) arl8 (ENSCVAG00000006913) NSUN6 (ENSCVAG00000006888) cacnb2a (ENSCVAG00000006849) SLC39A12 (ENSCVAG00000006812) MRC1 (ENSCVAG00000006782) TMEM236 (ENSCVAG00000006767) hacd1 (ENSCVAG00000006755) ##22 COLEC12 (ENSCVAG00000006734) ENSCVAG00000006724 tyms (ENSCVAG00000006713) enosf1 (ENSCVAG00000006707) Oryzias ANCESTRAL SPECIES 18 ENSGT00940000156086.d ENSGT00390000013743 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Oryzias_b ANCESTRAL SPECIES 16 ENSGT00940000156086.d ENSGT00390000013743 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Indian medaka MODERN SPECIES 14 DYNC2I1 (ENSOMEG00000003842) ENSOMEG00000003794 malrd1 (ENSOMEG00000003783) ENSOMEG00000003755 plxdc2b (ENSOMEG00000000081) ENSOMEG00000003707 chmp4c (ENSOMEG00000000079) zfand1 (ENSOMEG00000003674) maf1b (ENSOMEG00000003656) arl8 (ENSOMEG00000003634) NSUN6 (ENSOMEG00000003613) cacnb2a (ENSOMEG00000003573) SLC39A12 (ENSOMEG00000003515) MRC1 (ENSOMEG00000003488) TMEM236 (ENSOMEG00000003457) hacd1 (ENSOMEG00000003440) ##22 COLEC12 (ENSOMEG00000003417) CLUL1 (ENSOMEG00000003388) tyms (ENSOMEG00000003341) enosf1 (ENSOMEG00000003301) YES1 (ENSOMEG00000003245) ADCYAP1 (ENSOMEG00000003204) SMCHD1 (ENSOMEG00000002848) EMILIN2 (ENSOMEG00000002209) LPIN2 (ENSOMEG00000002192) MYOM1 (ENSOMEG00000002167) ENSOMEG00000002128 chmp5b (ENSOMEG00000002103) FASTKD3 (ENSOMEG00000002114) OPRK1 (ENSOMEG00000002087) RGS20 (ENSOMEG00000002080) Javanese ricefish MODERN SPECIES 12 ESYT2 (ENSOJAG00000017502) DYNC2I1 (ENSOJAG00000017314) ENSOJAG00000017305 ENSOJAG00000017295 malrd1 (ENSOJAG00000017118) plxdc2b (ENSOJAG00000017035) ENSOJAG00000017024 chmp4c (ENSOJAG00000017019) zfand1 (ENSOJAG00000017013) maf1b (ENSOJAG00000016956) arl8 (ENSOJAG00000016940) cacnb2a (ENSOJAG00000016520) SLC39A12 (ENSOJAG00000016485) MRC1 (ENSOJAG00000015349) TMEM236 (ENSOJAG00000015264) hacd1 (ENSOJAG00000015246) ##22 COLEC12 (ENSOJAG00000015243) ENSOJAG00000015191 tyms (ENSOJAG00000015137) YES1 (ENSOJAG00000013424) ADCYAP1 (ENSOJAG00000013308) METTL4 (ENSOJAG00000013276) EMILIN2 (ENSOJAG00000013041) MYL12B (ENSOJAG00000012155) FASTKD3 (ENSOJAG00000012148) chmp5b (ENSOJAG00000012117) ENSOJAG00000012093 RGS20 (ENSOJAG00000012088) lypla1 (ENSOJAG00000012074) mrpl15 (ENSOJAG00000012044) sox32 (ENSOJAG00000012009) Oryzias_a ANCESTRAL SPECIES 16 ENSGT00940000156086.d ENSGT00390000013743 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT00550000074817.u ENSGT01030000234607.A.a.a.a.c ENSGT00940000157341.h ENSGT00940000159123.b Japanese Medaka HdrR MODERN SPECIES 12 DYNC2I1 (ENSORLG00000010740) ENSORLG00000027898 ENSORLG00000010754 malrd1 (ENSORLG00000023049) PLXDC2 (ENSORLG00000010779) ENSORLG00000010786 chmp4c (ENSORLG00000010806) zfand1 (ENSORLG00000010815) maf1b (ENSORLG00000010829) arl8 (ENSORLG00000010847) NSUN6 (ENSORLG00000010870) cacnb2a (ENSORLG00000010896) SLC39A12 (ENSORLG00000010930) MRC1 (ENSORLG00000010988) TMEM236 (ENSORLG00000010995) hacd1 (ENSORLG00000011009) ##22 COLEC12 (ENSORLG00000011026) ENSORLG00000011032 enosf1 (ENSORLG00000011101) tyms (ENSORLG00000011063) YES1 (ENSORLG00000011192) ADCYAP1 (ENSORLG00000011205) METTL4 (ENSORLG00000011211) SMCHD1 (ENSORLG00000011268) EMILIN2 (ENSORLG00000011287) ENSORLG00000011317 MYOM1 (ENSORLG00000011397) ENSORLG00000011406 chmp5b (ENSORLG00000029884) FASTKD3 (ENSORLG00000011410) ENSORLG00000024140 Chinese medaka MODERN SPECIES 71 ESYT2 (ENSOSIG00000006756) DYNC2I1 (ENSOSIG00000006761) ENSOSIG00000006769 malrd1 (ENSOSIG00000006773) plxdc2b (ENSOSIG00000006802) ENSOSIG00000007112 chmp4c (ENSOSIG00000007115) zfand1 (ENSOSIG00000007117) maf1b (ENSOSIG00000007119) arl8 (ENSOSIG00000007123) NSUN6 (ENSOSIG00000007125) cacnb2a (ENSOSIG00000007150) ENSOSIG00000011681 MRC1 (ENSOSIG00000011690) TMEM236 (ENSOSIG00000012865) hacd1 (ENSOSIG00000012873) ##22 COLEC12 (ENSOSIG00000012878) ENSOSIG00000012887 tyms (ENSOSIG00000012893) YES1 (ENSOSIG00000012901) ADCYAP1 (ENSOSIG00000014531) METTL4 (ENSOSIG00000014533) EMILIN2 (ENSOSIG00000014541) LPIN2 (ENSOSIG00000014566) MYOM1 (ENSOSIG00000014774) ENSOSIG00000015113 FASTKD3 (ENSOSIG00000015115) OPRK1 (ENSOSIG00000015116) lypla1 (ENSOSIG00000015121) RGS20 (ENSOSIG00000015124) mrpl15 (ENSOSIG00000015126) Ovalentaria_B ANCESTRAL SPECIES 20 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Cichlidae ANCESTRAL SPECIES 18 ENSGT00940000156086.d ENSGT00390000013743 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Pseudocrenilabrinae ANCESTRAL SPECIES 20 ENSGT00940000156086.d ENSGT00390000013743 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Pseudocrenilabrinae_A ANCESTRAL SPECIES 19 ENSGT00940000156086.d ENSGT00390000013743 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Haplochromini ANCESTRAL SPECIES 21 ENSGT00940000156086.d ENSGT00390000013743 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Haplochromini_A ANCESTRAL SPECIES 21 ENSGT00940000156086.d ENSGT00390000013743 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h P. nyererei MODERN SPECIES 382 ENSPNYG00000000499 malrd1 (ENSPNYG00000000517) plxdc2b (ENSPNYG00000000584) zfand1 (ENSPNYG00000000596) ENSPNYG00000000610 maf1b (ENSPNYG00000000616) arl8 (ENSPNYG00000000635) NSUN6 (ENSPNYG00000000646) cacnb2a (ENSPNYG00000000672) SLC39A12 (ENSPNYG00000000733) MRC1 (ENSPNYG00000000778) TMEM236 (ENSPNYG00000000884) hacd1 (ENSPNYG00000000901) ##22 COLEC12 (ENSPNYG00000000937) CLUL1 (ENSPNYG00000000946) tyms (ENSPNYG00000000985) enosf1 (ENSPNYG00000001174) YES1 (ENSPNYG00000001250) ADCYAP1 (ENSPNYG00000001296) METTL4 (ENSPNYG00000001318) SMCHD1 (ENSPNYG00000001333) EMILIN2 (ENSPNYG00000001414) LPIN2 (ENSPNYG00000001433) MYOM1 (ENSPNYG00000001499) MYL12B (ENSPNYG00000001547) FASTKD3 (ENSPNYG00000001552) chmp5b (ENSPNYG00000001561) ENSPNYG00000001599 Haplochromini_B ANCESTRAL SPECIES 18 ENSGT00940000156086.d ENSGT00390000013743 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Eastern happy MODERN SPECIES 21 ESYT2 (ENSACLG00000000296) DYNC2I1 (ENSACLG00000000421) ENSACLG00000000478 malrd1 (ENSACLG00000000510) plxdc2b (ENSACLG00000000698) ENSACLG00000000713 chmp4c (ENSACLG00000000727) zfand1 (ENSACLG00000000740) maf1b (ENSACLG00000000767) arl8 (ENSACLG00000000787) NSUN6 (ENSACLG00000000803) cacnb2a (ENSACLG00000000867) SLC39A12 (ENSACLG00000001027) MRC1 (ENSACLG00000001041) TMEM236 (ENSACLG00000001069) hacd1 (ENSACLG00000001077) ##22 COLEC12 (ENSACLG00000001101) CLUL1 (ENSACLG00000001106) tyms (ENSACLG00000001127) enosf1 (ENSACLG00000001151) YES1 (ENSACLG00000001229) ADCYAP1 (ENSACLG00000001273) METTL4 (ENSACLG00000001329) SMCHD1 (ENSACLG00000001360) EMILIN2 (ENSACLG00000001450) LPIN2 (ENSACLG00000001467) MYOM1 (ENSACLG00000001636) MYL12B (ENSACLG00000002113) FASTKD3 (ENSACLG00000002122) chmp5b (ENSACLG00000002138) OPRK1 (ENSACLG00000002193) Zebra mbuna MODERN SPECIES 1112 DYNC2I1 (ENSMZEG00005000704) ENSMZEG00005000773 malrd1 (ENSMZEG00005000804) plxdc2b (ENSMZEG00005000890) ENSMZEG00005000909 chmp4c (ENSMZEG00005000932) zfand1 (ENSMZEG00005000943) maf1b (ENSMZEG00005000951) arl8 (ENSMZEG00005000976) NSUN6 (ENSMZEG00005000999) cacnb2a (ENSMZEG00005001051) SLC39A12 (ENSMZEG00005001304) MRC1 (ENSMZEG00005001317) ENSMZEG00005001364 TMEM236 (ENSMZEG00005001371) hacd1 (ENSMZEG00005001380) ##22 COLEC12 (ENSMZEG00005001401) CLUL1 (ENSMZEG00005001408) tyms (ENSMZEG00005001459) enosf1 (ENSMZEG00005001419) YES1 (ENSMZEG00005001467) ADCYAP1 (ENSMZEG00005001484) METTL4 (ENSMZEG00005001519) SMCHD1 (ENSMZEG00005001548) EMILIN2 (ENSMZEG00005001644) LPIN2 (ENSMZEG00005001676) MYOM1 (ENSMZEG00005001720) MYL12B (ENSMZEG00005001784) FASTKD3 (ENSMZEG00005001794) chmp5b (ENSMZEG00005001802) OPRK1 (ENSMZEG00005001899) Burton s mouthbrooder MODERN SPECIES 319 MRC1 (ENSHBUG00000016874) TMEM236 (ENSHBUG00000016817) hacd1 (ENSHBUG00000016790) ##22 COLEC12 (ENSHBUG00000016761) CLUL1 (ENSHBUG00000016749) enosf1 (ENSHBUG00000016734) tyms (ENSHBUG00000016669) YES1 (ENSHBUG00000016658) ADCYAP1 (ENSHBUG00000016630) METTL4 (ENSHBUG00000016596) SMCHD1 (ENSHBUG00000016557) EMILIN2 (ENSHBUG00000016253) LPIN2 (ENSHBUG00000016222) MYOM1 (ENSHBUG00000016165) MYL12B (ENSHBUG00000016121) FASTKD3 (ENSHBUG00000016113) chmp5b (ENSHBUG00000016103) OPRK1 (ENSHBUG00000016074) Lyretail cichlid MODERN SPECIES 325 ESYT2 (ENSNBRG00000016147) DYNC2I1 (ENSNBRG00000016077) ENSNBRG00000016045 ENSNBRG00000016029 malrd1 (ENSNBRG00000015977) plxdc2b (ENSNBRG00000015938) ENSNBRG00000015926 chmp4c (ENSNBRG00000015918) zfand1 (ENSNBRG00000015833) maf1b (ENSNBRG00000015797) arl8 (ENSNBRG00000015782) ENSNBRG00000015771 cacnb2a (ENSNBRG00000015264) SLC39A12 (ENSNBRG00000015148) MRC1 (ENSNBRG00000015071) hacd1 (ENSNBRG00000015050) ##22 COLEC12 (ENSNBRG00000014992) CLUL1 (ENSNBRG00000014966) tyms (ENSNBRG00000014804) enosf1 (ENSNBRG00000014769) YES1 (ENSNBRG00000014747) ADCYAP1 (ENSNBRG00000014740) METTL4 (ENSNBRG00000014728) SMCHD1 (ENSNBRG00000014655) EMILIN2 (ENSNBRG00000014627) LPIN2 (ENSNBRG00000014589) MYOM1 (ENSNBRG00000014495) MYL12B (ENSNBRG00000014482) FASTKD3 (ENSNBRG00000014435) chmp5b (ENSNBRG00000014449) OPRK1 (ENSNBRG00000014072) Nile tilapia MODERN SPECIES 21 ESYT2 (ENSONIG00000005994) DYNC2I1 (ENSONIG00000006004) ENSONIG00000028998 malrd1 (ENSONIG00000006012) plxdc2b (ENSONIG00000006016) ENSONIG00000006023 chmp4c (ENSONIG00000006024) zfand1 (ENSONIG00000006027) maf1b (ENSONIG00000006030) arl8 (ENSONIG00000006036) NSUN6 (ENSONIG00000006038) cacnb2a (ENSONIG00000006040) SLC39A12 (ENSONIG00000006057) MRC1 (ENSONIG00000006060) TMEM236 (ENSONIG00000006071) hacd1 (ENSONIG00000006072) ##22 COLEC12 (ENSONIG00000006077) CLUL1 (ENSONIG00000006081) tyms (ENSONIG00000006083) ENSONIG00000041839 enosf1 (ENSONIG00000006085) YES1 (ENSONIG00000006089) ADCYAP1 (ENSONIG00000006092) METTL4 (ENSONIG00000006094) METTL4 (ENSONIG00000039791) SMCHD1 (ENSONIG00000006096) EMILIN2 (ENSONIG00000006101) LPIN2 (ENSONIG00000006102) MYOM1 (ENSONIG00000006105) ENSONIG00000029189 FASTKD3 (ENSONIG00000006120) Midas cichlid MODERN SPECIES 718 ENSACIG00000016865 ENSACIG00000016849 malrd1 (ENSACIG00000016783) plxdc2b (ENSACIG00000016745) ENSACIG00000016728 ENSACIG00000016725 zfand1 (ENSACIG00000016700) zfand1 (ENSACIG00000016680) arl8 (ENSACIG00000016662) NSUN6 (ENSACIG00000016632) cacnb2a (ENSACIG00000016610) ENSACIG00000016590 MRC1 (ENSACIG00000016518) MRC1 (ENSACIG00000016449) TMEM236 (ENSACIG00000016436) hacd1 (ENSACIG00000016413) ##22 COLEC12 (ENSACIG00000016362) ENSACIG00000016341 tyms (ENSACIG00000016229) enosf1 (ENSACIG00000016071) YES1 (ENSACIG00000016027) ADCYAP1 (ENSACIG00000016014) METTL4 (ENSACIG00000015975) Pomacentridae ANCESTRAL SPECIES 11 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u ENSGT00940000157341.h Pomacentridae_A ANCESTRAL SPECIES 8 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT01090000260132.b.a.a ENSGT00390000016237 ENSGT00390000006950.c ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00550000074817.u Amphiprion ANCESTRAL SPECIES 7 ENSGT00390000013743 ENSGT00940000163397 ENSGT01030000234531.B ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000006896 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A.a.a ENSGT00530000063668.A.d ENSGT00390000014786.f ENSGT00390000014290 ENSGT00940000154920.bb.b ENSGT00950000183154.b.a.a.a ENSGT01090000260132.b.a.a ENSGT00950000182912.b.a.a.b.b.b.a.l.a ENSGT00390000016237 ENSGT00390000006950.c ENSGT01030000234633.B.a.c ENSGT00940000156313.c.a ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c Clown anemonefish MODERN SPECIES 2568 SLC39A12 (ENSAOCG00000013623) MRC1 (ENSAOCG00000013653) TMEM236 (ENSAOCG00000013673) hacd1 (ENSAOCG00000013707) ##22 ENSAOCG00000013770 Orange clownfish MODERN SPECIES 14 DYNC2I1 (ENSAPEG00000015572) ENSAPEG00000015526 ENSAPEG00000015510 malrd1 (ENSAPEG00000015427) plxdc2b (ENSAPEG00000015389) ENSAPEG00000015371 chmp4c (ENSAPEG00000015349) zfand1 (ENSAPEG00000015340) maf1b (ENSAPEG00000015308) arl8 (ENSAPEG00000015271) NSUN6 (ENSAPEG00000015212) cacnb2a (ENSAPEG00000015139) SLC39A12 (ENSAPEG00000015107) MRC1 (ENSAPEG00000015082) TMEM236 (ENSAPEG00000015061) hacd1 (ENSAPEG00000015024) ##22 COLEC12 (ENSAPEG00000015008) CLUL1 (ENSAPEG00000014976) tyms (ENSAPEG00000014960) enosf1 (ENSAPEG00000014875) YES1 (ENSAPEG00000014814) ADCYAP1 (ENSAPEG00000014761) ENSAPEG00000014740 ENSAPEG00000014732 METTL4 (ENSAPEG00000014583) SMCHD1 (ENSAPEG00000014438) EMILIN2 (ENSAPEG00000014353) LPIN2 (ENSAPEG00000014265) MYOM1 (ENSAPEG00000013722) ENSAPEG00000013649 FASTKD3 (ENSAPEG00000013632) Spiny chromis MODERN SPECIES 1181 arl8 (ENSAPOG00000016146) NSUN6 (ENSAPOG00000016126) cacnb2a (ENSAPOG00000016048) SLC39A12 (ENSAPOG00000015381) MRC1 (ENSAPOG00000015368) TMEM236 (ENSAPOG00000015351) hacd1 (ENSAPOG00000015328) ##22 COLEC12 (ENSAPOG00000015284) ENSAPOG00000015276 Bicolor damselfish MODERN SPECIES 1525 ENSSPAG00000010970 ENSSPAG00000010983 MRC1 (ENSSPAG00000010994) TMEM236 (ENSSPAG00000011040) hacd1 (ENSSPAG00000011061) ##22 COLEC12 (ENSSPAG00000011112) CLUL1 (ENSSPAG00000011148) tyms (ENSSPAG00000011295) enosf1 (ENSSPAG00000011359) YES1 (ENSSPAG00000011409) ADCYAP1 (ENSSPAG00000011447) Pinecone sodierfish MODERN SPECIES 12 ESYT2 (ENSMMDG00005007951) DYNC2I1 (ENSMMDG00005007915) ENSMMDG00005007910 maf1b (ENSMMDG00005007908) zfand1 (ENSMMDG00005007906) chmp4c (ENSMMDG00005007903) ENSMMDG00005007902 plxdc2b (ENSMMDG00005007900) malrd1 (ENSMMDG00005007890) arl8 (ENSMMDG00005007886) NSUN6 (ENSMMDG00005007881) cacnb2a (ENSMMDG00005007830) SLC39A12 (ENSMMDG00005007818) MRC1 (ENSMMDG00005007263) TMEM236 (ENSMMDG00005007237) hacd1 (ENSMMDG00005007235) ##22 COLEC12 (ENSMMDG00005007231) CLUL1 (ENSMMDG00005007227) tyms (ENSMMDG00005007223) enosf1 (ENSMMDG00005007166) YES1 (ENSMMDG00005003159) ADCYAP1 (ENSMMDG00005003017) METTL4 (ENSMMDG00005003006) SMCHD1 (ENSMMDG00005002853) EMILIN2 (ENSMMDG00005002780) LPIN2 (ENSMMDG00005002752) MYOM1 (ENSMMDG00005002584) ENSMMDG00005002516 FASTKD3 (ENSMMDG00005022643) chmp5b (ENSMMDG00005022642) OPRK1 (ENSMMDG00005022641) Cod MODERN SPECIES 15 insig1 (ENSGMOG00000004976) en2a (ENSGMOG00000004983) ENSGMOG00000028920 ENSGMOG00000030389 shha (ENSGMOG00000027117) rnf32 (ENSGMOG00000005073) lmbr1 (ENSGMOG00000005099) nom1 (ENSGMOG00000005129) mnx1 (ENSGMOG00000005155) ube3c (ENSGMOG00000005168) dnajb6b (ENSGMOG00000031737) CACNB2 (ENSGMOG00000005230) SLC39A12 (ENSGMOG00000005264) MRC1 (ENSGMOG00000005302) TMEM236 (ENSGMOG00000005361) HACD1 (ENSGMOG00000005368) ##22 ENSGMOG00000005392 tyms (ENSGMOG00000005420) ENOSF1 (ENSGMOG00000005433) YES1 (ENSGMOG00000013026) adcyap1a (ENSGMOG00000022319) METTL4 (ENSGMOG00000005506) SMCHD1 (ENSGMOG00000005549) EMILIN2 (ENSGMOG00000029684) LPIN2 (ENSGMOG00000005655) MYOM1 (ENSGMOG00000005713) myl12.1 (ENSGMOG00000005791) ENSGMOG00000033963 ENSGMOG00000005820 ENSGMOG00000005841 lypla1 (ENSGMOG00000005853) Osteoglossiformes ANCESTRAL SPECIES 29 ENSGT00950000183138.a.a.b.v.a.b ENSGT00950000183138.a.a.b.v.b ENSGT00390000005489 ENSGT00730000111180 ENSGT00940000159257 ENSGT00940000162556.B ENSGT00440000033408.a.a ENSGT00940000165597 ENSGT00940000157567 ENSGT00940000155370 ENSGT00950000182837.a.b.a ENSGT00940000157914 ENSGT01050000244842.a.a.b.b.a ENSGT00390000015525.a ENSGT00940000157171 ENSGT00530000062962.a.b ##22 ENSGT00950000183074.A ENSGT00530000063668.A.c ENSGT00390000014786 ENSGT00390000014290 ENSGT00940000154920 ENSGT00950000183154.b.a.b ENSGT00390000016237 ENSGT00390000006950 ENSGT01030000234633.B.a.c ENSGT00940000156313.c.b ENSGT00940000154982.c ENSGT00940000153607.a.b ENSGT01030000234607.A.a.a.a.c ENSGT00450000040296 ENSGT00550000074817.x Asian bonytongue MODERN SPECIES 24 ENSSFOG00015026098 zfand1 (ENSSFOG00015002402) chmp4c (ENSSFOG00015027269) ENSSFOG00015026603 plxdc2b (ENSSFOG00015025231) malrd1 (ENSSFOG00015002145) arl8 (ENSSFOG00015002122) NSUN6 (ENSSFOG00015001941) cacnb2a (ENSSFOG00015001855) ENSSFOG00015027472 ENSSFOG00015001791 MRC1 (ENSSFOG00015001671) MRC1 (ENSSFOG00015001559) TMEM236 (ENSSFOG00015001541) stam (ENSSFOG00015001483) hacd1 (ENSSFOG00015001435) ##22 colec12 (ENSSFOG00015001429) clul1 (ENSSFOG00015001348) tyms (ENSSFOG00015001297) enosf1 (ENSSFOG00015001233) yes1 (ENSSFOG00015001214) ADCYAP1 (ENSSFOG00015001198) METTL4 (ENSSFOG00015001178) SMCHD1 (ENSSFOG00015001170) EMILIN2 (ENSSFOG00015001133) LPIN2 (ENSSFOG00015001062) MYOM1 (ENSSFOG00015000918) myl12.1 (ENSSFOG00015026869) FASTKD3 (ENSSFOG00015000899) bag1 (ENSSFOG00015024302) ENSSFOG00015000875 P. kingsleyae MODERN SPECIES 479 arl8 (ENSPKIG00000011377) NSUN6 (ENSPKIG00000011356) cacnb2a (ENSPKIG00000011240) SLC39A12 (ENSPKIG00000011166) MRC1 (ENSPKIG00000011081) TMEM236 (ENSPKIG00000011055) stam (ENSPKIG00000011002) hacd1 (ENSPKIG00000010955) ##22 colec12 (ENSPKIG00000010920) clul1 (ENSPKIG00000010884) tyms (ENSPKIG00000010770) enosf1 (ENSPKIG00000010690) ENSPKIG00000010648 ENSPKIG00000010630 ADCYAP1 (ENSPKIG00000010573) Spotted gar MODERN SPECIES 675 PFKP (ENSLOCG00000010769) pitrm1 (ENSLOCG00000010785) plxdc2b (ENSLOCG00000010799) malrd1 (ENSLOCG00000010809) ENSLOCG00000010822 ENSLOCG00000010825 ENSLOCG00000010839 ENSLOCG00000010847 arl8 (ENSLOCG00000010851) NSUN6 (ENSLOCG00000010862) CACNB2 (ENSLOCG00000010868) SLC39A12 (ENSLOCG00000010889) MRC1 (ENSLOCG00000010898) tmem236 (ENSLOCG00000010926) stam (ENSLOCG00000010930) hacd1 (ENSLOCG00000010955) ##22 colec12 (ENSLOCG00000010964) clul1 (ENSLOCG00000010985) tyms (ENSLOCG00000010997) enosf1 (ENSLOCG00000011003) yes1 (ENSLOCG00000011016) adcyap1b (ENSLOCG00000011028) ENSLOCG00000011035 METTL4 (ENSLOCG00000011054) SMCHD1 (ENSLOCG00000011069) EMILIN2 (ENSLOCG00000011086) LPIN2 (ENSLOCG00000011093) myom1a (ENSLOCG00000011117) myl12.1 (ENSLOCG00000011144) FASTKD3 (ENSLOCG00000011153) bag1 (ENSLOCG00000011163) Reedfish MODERN SPECIES 14 ENSECRG00000003815 msrb2 (ENSECRG00000003821) ARMC3 (ENSECRG00000003859) ARMC3 (ENSECRG00000004202) pip4k2aa (ENSECRG00000004248) spag6 (ENSECRG00000004292) bmi1b (ENSECRG00000004316) commd3 (ENSECRG00000004336) dnajc1 (ENSECRG00000004357) MLLT10 (ENSECRG00000004393) ENSECRG00000004425 ENSECRG00000004435 CACNB2 (ENSECRG00000004458) TMEM236 (ENSECRG00000004483) stam (ENSECRG00000004501) hacd1 (ENSECRG00000004529) ##22 vim (ENSECRG00000004547) trdmt1 (ENSECRG00000004633) ENSECRG00000004762 ENSECRG00000004787 ENSECRG00000004801 ENSECRG00000004813 RSU1 (ENSECRG00000004826) C1QL3 (ENSECRG00000004840) pter (ENSECRG00000004847) ENSECRG00000004859 ENSECRG00000004871 STEAP2 (ENSECRG00000000826) ENSECRG00000001062 ripk2 (ENSECRG00000001565) MMP16 (ENSECRG00000001603) Elephant shark MODERN SPECIES 1545 hacd1 (ENSCMIG00000016972) ##22 ST8SIA6 (ENSCMIG00000016971) ENSCMIG00000016964 ENSCMIG00000016951 TRDMT1 (ENSCMIG00000016917) CUBN (ENSCMIG00000016862) rsu1 (ENSCMIG00000016840) pter (ENSCMIG00000016835) ENSCMIG00000016832 STEAP1 (ENSCMIG00000016831) STEAP2 (ENSCMIG00000016830) CFAP69 (ENSCMIG00000016828) FAM237B (ENSCMIG00000016826) GTPBP10 (ENSCMIG00000016825) ADAM22 (ENSCMIG00000016582) ENSCMIG00000016432 Cyclostomata ANCESTRAL SPECIES 138 ENSGT00940000157171.g ENSGT00530000062962.a ##22 ENSGT00390000004541 Lamprey MODERN SPECIES 434 ENSPMAG00000002819 hacd1 (ENSPMAG00000002799) ##22 ENSPMAG00000002794 dcakd (ENSPMAG00000002791) Hagfish MODERN SPECIES 1334 Hox13II (ENSEBUG00000014748) ENSEBUG00000011315 ENSEBUG00000000369 cdk5rap3 (ENSEBUG00000010254) ENSEBUG00000010794 ENSEBUG00000014966 ENSEBUG00000016857 ENSEBUG00000009436 hacd1 (ENSEBUG00000005153) ##22 ENSEBUG00000004160 Ecdysozoa ANCESTRAL SPECIES ENSGT00530000062962.a ##22 Caenorhabditis elegans MODERN SPECIES 5 ZC404.1 (WBGene00022601) dmsr-9 (WBGene00022606) dmsr-10 (WBGene00022604) dmsr-11 (WBGene00022605) dmsr-12 (WBGene00019262) dmsr-16 (WBGene00194821) dmsr-14 (WBGene00020523) dmsr-13 (WBGene00020524) T15B7.8 (WBGene00020520) dmsr-15 (WBGene00020525) col-141 (WBGene00000714) col-142 (WBGene00000715) T15B7.14 (WBGene00020526) col-143 (WBGene00000716) T15B7.15 (WBGene00020527) hpo-8 (WBGene00020517) ##22 lgc-54 (WBGene00020528) T15B7.1 (WBGene00020516) gpa-10 (WBGene00001672) frpr-18 (WBGene00020586) unc-70 (WBGene00006803) K11C4.2 (WBGene00019643) K11C4.1 (WBGene00019642) odc-1 (WBGene00003844) unc-68 (WBGene00006801) lipl-6 (WBGene00021963) Y57E12B.10 (WBGene00202501) Y57E12B.4 (WBGene00021964) Y57E12B.1 (WBGene00021961) Y57E12B.11 (WBGene00235311) T07H8.11 (WBGene00304201) Fruitfly MODERN SPECIES 16 firl (FBgn0032405) Rab3-GAP (FBgn0027505) CG34164 (FBgn0085193) RpL7-like (FBgn0032404) JhI-21 (FBgn0028425) PLCXD (FBgn0032402) Plzf (FBgn0032401) CG6770 (FBgn0032400) CG6785 (FBgn0032399) CG6766 (FBgn0032398) Tom70 (FBgn0032397) CG18788 (FBgn0042126) dmGlut (FBgn0010497) Wdr81 (FBgn0032395) Rh5 (FBgn0014019) Hacd1 (FBgn0032394) ##22 Nfs1 (FBgn0032393) CG18787 (FBgn0042125) Ada1-1 (FBgn0051865) Qtzl (FBgn0051864) CG18789 (FBgn0042127) Ada1-2 (FBgn0051866) escl (FBgn0032391) dgt2 (FBgn0032390) zuc (FBgn0261266) CG34163 (FBgn0085192) CG6686 (FBgn0032388) CG16965 (FBgn0032387) CG16964 (FBgn0032385) Crys (FBgn0005664) Or33c (FBgn0026390) Yeast MODERN SPECIES 10 MDV1 (YJL112W) CCT7 (YJL111W) GZF3 (YJL110C) UTP10 (YJL109C) PRM10 (YJL108C) YJL107C IME2 (YJL106W) SET4 (YJL105W) PAM16 (YJL104W) GSM1 (YJL103C) MEF2 (YJL102W) GSH1 (YJL101C) LSB6 (YJL100W) CHS6 (YJL099W) SAP185 (YJL098W) PHS1 (YJL097W) #22 MRPL49 (YJL096W) BCK1 (YJL095W) KHA1 (YJL094C) TOK1 (YJL093C) SRS2 (YJL092W) GWT1 (YJL091C) DPB11 (YJL090C) SIP4 (YJL089W) ARG3 (YJL088W) TRL1 (YJL087C) YJL086C EXO70 (YJL085W) ALY2 (YJL084C) TAX4 (YJL083W) IML2 (YJL082W)