Rodentia	ANCESTRAL SPECIES	3	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Sciuridae	ANCESTRAL SPECIES	11	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Marmotini	ANCESTRAL SPECIES	9	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857.w #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Alpin marmot	MODERN SPECIES	7	PIF1 (ENSMMMG00000007343) #7	PLEKHO2 (ENSMMMG00000007337) #8	ANKDD1A (ENSMMMG00000007304) #9	SPG21 (ENSMMMG00000007291) #10	ENSMMMG00000007284 #11	ENSMMMG00000007278 #12	RASL12 (ENSMMMG00000007263) #13	KBTBD13 (ENSMMMG00000007256) #14	UBAP1L (ENSMMMG00000007244) #15	CLPX (ENSMMMG00000007193) #16	CILP (ENSMMMG00000007122) #17	PARP16 (ENSMMMG00000007101) #18	IGDCC3 (ENSMMMG00000007025) #19	IGDCC4 (ENSMMMG00000006948) #20	DPP8 (ENSMMMG00000006899) #21	HACD3 (ENSMMMG00000006884) #22	INTS14 (ENSMMMG00000006868) #23	SLC24A1 (ENSMMMG00000006817) #24	DENND4A (ENSMMMG00000006769) #25	ENSMMMG00000006762 #26	RAB11A (ENSMMMG00000006747) #27	MEGF11 (ENSMMMG00000006311) #28	DIS3L (ENSMMMG00000006220) #29	TIPIN (ENSMMMG00000006196) #30	MAP2K1 (ENSMMMG00000006173) #31	SNAPC5 (ENSMMMG00000006163) #32	RPL4 (ENSMMMG00000006109) #33	ENSMMMG00000006104 #34	ZWILCH (ENSMMMG00000006077) #35	LCTL (ENSMMMG00000006061) #36	SMAD6 (ENSMMMG00000006032) #37
Marmotini_b	ANCESTRAL SPECIES	4	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857.w #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Arctic ground squirrel	MODERN SPECIES	33	ENSUPAG00010000549	ANKDD1A (ENSUPAG00010000557) #9	SPG21 (ENSUPAG00010000593) #10	MTFMT (ENSUPAG00010000615) #11	SLC51B (ENSUPAG00010000624) #12	RASL12 (ENSUPAG00010000634) #13	KBTBD13 (ENSUPAG00010000664) #14	UBAP1L (ENSUPAG00010000672) #15	PDCD7 (ENSUPAG00010000682)	CLPX (ENSUPAG00010000698) #16	CILP (ENSUPAG00010000774) #17	PARP16 (ENSUPAG00010000785) #18	IGDCC3 (ENSUPAG00010000811) #19	IGDCC4 (ENSUPAG00010000872) #20	DPP8 (ENSUPAG00010000912) #21	HACD3 (ENSUPAG00010001090) #22	INTS14 (ENSUPAG00010001105) #23	SLC24A1 (ENSUPAG00010001132) #24	DENND4A (ENSUPAG00010001204) #25	RAB11A (ENSUPAG00010001338) #27	MEGF11 (ENSUPAG00010001370) #28	DIS3L (ENSUPAG00010001911) #29
Squirrel	MODERN SPECIES	71	ANKDD1A (ENSSTOG00000010088) #9	ENSSTOG00000010101 #10	MTFMT (ENSSTOG00000020944) #11	SLC51B (ENSSTOG00000010125) #12	RASL12 (ENSSTOG00000024973) #13	KBTBD13 (ENSSTOG00000010131) #14	UBAP1L (ENSSTOG00000019679) #15	PDCD7 (ENSSTOG00000003742)	CLPX (ENSSTOG00000003763) #16	CILP (ENSSTOG00000026112) #17	PARP16 (ENSSTOG00000008979) #18	IGDCC3 (ENSSTOG00000023391) #19	IGDCC4 (ENSSTOG00000002189) #20	DPP8 (ENSSTOG00000002203) #21	ENSSTOG00000025872	HACD3 (ENSSTOG00000002211) #22	INTS14 (ENSSTOG00000002217) #23	SLC24A1 (ENSSTOG00000002228) #24	DENND4A (ENSSTOG00000026966) #25	RAB11A (ENSSTOG00000015255) #27	MEGF11 (ENSSTOG00000015258) #28	DIS3L (ENSSTOG00000009158) #29	TIPIN (ENSSTOG00000009182) #30	MAP2K1 (ENSSTOG00000009190) #31	SNAPC5 (ENSSTOG00000009201) #32	RPL4 (ENSSTOG00000009221) #33	ZWILCH (ENSSTOG00000009607) #35	LCTL (ENSSTOG00000028073) #36	SMAD6 (ENSSTOG00000000696) #37	SMAD3 (ENSSTOG00000010286)	AAGAB (ENSSTOG00000010291)
Eurasian red squirrel	MODERN SPECIES	11	SPG21 (ENSSVLG00005022592) #10	MTFMT (ENSSVLG00005022671) #11	SLC51B (ENSSVLG00005022725) #12	RASL12 (ENSSVLG00005022769) #13	KBTBD13 (ENSSVLG00005022826) #14	UBAP1L (ENSSVLG00005022843) #15	PDCD7 (ENSSVLG00005022889)	CLPX (ENSSVLG00005022929) #16	CILP (ENSSVLG00005022969) #17	PARP16 (ENSSVLG00005023083) #18	ENSSVLG00005023161	IGDCC3 (ENSSVLG00005023208) #19	IGDCC4 (ENSSVLG00005023281) #20	DPP8 (ENSSVLG00005023347) #21	ENSSVLG00005023642	HACD3 (ENSSVLG00005023708) #22	INTS14 (ENSSVLG00005023820) #23	SLC24A1 (ENSSVLG00005023979) #24	DENND4A (ENSSVLG00005024160) #25	RAB11A (ENSSVLG00005024246) #27	MEGF11 (ENSSVLG00005024351) #28	DIS3L (ENSSVLG00005024622) #29	TIPIN (ENSSVLG00005024668) #30	MAP2K1 (ENSSVLG00005024707) #31	SNAPC5 (ENSSVLG00005024729) #32	ENSSVLG00005024744 #33	ZWILCH (ENSSVLG00005024833) #35	LCTL (ENSSVLG00005024912) #36	SMAD6 (ENSSVLG00005024946) #37	ENSSVLG00005024968	SMAD3 (ENSSVLG00005024991)
Hystricomorpha	ANCESTRAL SPECIES	36	ENSGT00950000183014.f.b.a.b	ENSGT00530000064244.a	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145.vb #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Hystricomorpha_a	ANCESTRAL SPECIES	38	ENSGT00950000183014.f.b.a.b	ENSGT00530000064244.a	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145.vb #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Hystricomorpha_b	ANCESTRAL SPECIES	35	ENSGT00950000183014.f.b.a.b	ENSGT00530000064244.a	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145.vb #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Long-tailed chinchilla	MODERN SPECIES	157	ENSCLAG00000010665	GP9 (ENSCLAG00000012298)	SPG21 (ENSCLAG00000011678) #10	MTFMT (ENSCLAG00000014170) #11	SLC51B (ENSCLAG00000011594) #12	RASL12 (ENSCLAG00000011152) #13	KBTBD13 (ENSCLAG00000018082) #14	UBAP1L (ENSCLAG00000010285) #15	PDCD7 (ENSCLAG00000007922)	CLPX (ENSCLAG00000016601) #16	CILP (ENSCLAG00000014495) #17	PARP16 (ENSCLAG00000012092) #18	IGDCC3 (ENSCLAG00000010244) #19	IGDCC4 (ENSCLAG00000007751) #20	DPP8 (ENSCLAG00000014937) #21	HACD3 (ENSCLAG00000010725) #22	INTS14 (ENSCLAG00000009395) #23	SLC24A1 (ENSCLAG00000013073) #24	DENND4A (ENSCLAG00000007003) #25	RAB11A (ENSCLAG00000007435) #27	MEGF11 (ENSCLAG00000013146) #28	DIS3L (ENSCLAG00000005741) #29	TIPIN (ENSCLAG00000004924) #30	MAP2K1 (ENSCLAG00000013042) #31	SNAPC5 (ENSCLAG00000011660) #32	RPL4 (ENSCLAG00000010827) #33	ZWILCH (ENSCLAG00000010124) #35	LCTL (ENSCLAG00000004564) #36	ENSCLAG00000005550 #37	SMAD3 (ENSCLAG00000005027)	AAGAB (ENSCLAG00000008364)
Degu	MODERN SPECIES	67	SPG21 (ENSODEG00000016267) #10	ENSODEG00000017695 #11	SLC51B (ENSODEG00000016552) #12	RASL12 (ENSODEG00000016297) #13	KBTBD13 (ENSODEG00000020550) #14	ENSODEG00000016276 #15	PDCD7 (ENSODEG00000016758)	ENSODEG00000016607	CLPX (ENSODEG00000016361) #16	CILP (ENSODEG00000016085) #17	ENSODEG00000020368	PARP16 (ENSODEG00000016601) #18	IGDCC3 (ENSODEG00000016285) #19	IGDCC4 (ENSODEG00000016455) #20	DPP8 (ENSODEG00000016356) #21	HACD3 (ENSODEG00000016975) #22	INTS14 (ENSODEG00000017006) #23	SLC24A1 (ENSODEG00000016047) #24	ENSODEG00000016544 #25	ENSODEG00000016435	ENSODEG00000016878 #27	MEGF11 (ENSODEG00000015967) #28	DIS3L (ENSODEG00000015811) #29	MAP2K1 (ENSODEG00000016739) #31	ENSODEG00000016495 #33	ZWILCH (ENSODEG00000016374) #35	LCTL (ENSODEG00000016271) #36	ENSODEG00000020317	SMAD6 (ENSODEG00000016272) #37	SMAD3 (ENSODEG00000015739)	ENSODEG00000015886
Guinea pig	MODERN SPECIES	101	BNIP2 (ENSCPOG00000004962)	GTF2A2 (ENSCPOG00000035441)	GCNT3 (ENSCPOG00000022353)	FAM81A (ENSCPOG00000015628)	MYO1E (ENSCPOG00000002570)	CCNB2 (ENSCPOG00000026977)	RNF111 (ENSCPOG00000010550)	SLTM (ENSCPOG00000026109)	MINDY2 (ENSCPOG00000002287)	CLPX (ENSCPOG00000003391) #16	CILP (ENSCPOG00000036223) #17	PARP16 (ENSCPOG00000025232) #18	IGDCC3 (ENSCPOG00000006751) #19	IGDCC4 (ENSCPOG00000004519) #20	DPP8 (ENSCPOG00000014124) #21	HACD3 (ENSCPOG00000013593) #22	INTS14 (ENSCPOG00000000764) #23	SLC24A1 (ENSCPOG00000013596) #24	DENND4A (ENSCPOG00000013602) #25	RAB11A (ENSCPOG00000037599) #27	MEGF11 (ENSCPOG00000006468) #28	DIS3L (ENSCPOG00000000250) #29	TIPIN (ENSCPOG00000000251) #30	MAP2K1 (ENSCPOG00000003053) #31	RPL4 (ENSCPOG00000003055) #33	ZWILCH (ENSCPOG00000001241) #35	LCTL (ENSCPOG00000001245) #36	ENSCPOG00000026722	ENSCPOG00000003533	ENSCPOG00000013176	ENSCPOG00000015403
Naked mole-rat female	MODERN SPECIES	19	ENSHGLG00000048650	ENSHGLG00000016618	SPG21 (ENSHGLG00000015251) #10	ENSHGLG00000048707 #11	SLC51B (ENSHGLG00000040758) #12	ENSHGLG00000008881 #13	ENSHGLG00000007567 #14	UBAP1L (ENSHGLG00000005478) #15	PDCD7 (ENSHGLG00000005335)	CLPX (ENSHGLG00000008735) #16	CILP (ENSHGLG00000011932) #17	PARP16 (ENSHGLG00000010657) #18	IGDCC3 (ENSHGLG00000006674) #19	IGDCC4 (ENSHGLG00000017462) #20	DPP8 (ENSHGLG00000014997) #21	HACD3 (ENSHGLG00000011870) #22	INTS14 (ENSHGLG00000010722) #23	SLC24A1 (ENSHGLG00000008872) #24	DENND4A (ENSHGLG00000009810) #25	ENSHGLG00000044288	RAB11A (ENSHGLG00000048551) #27	MEGF11 (ENSHGLG00000011012) #28	ENSHGLG00000007770 #29	ENSHGLG00000005971 #30	ENSHGLG00000048822	ENSHGLG00000010036 #31	ENSHGLG00000040904 #32	ENSHGLG00000008054 #33	ZWILCH (ENSHGLG00000016059) #35	LCTL (ENSHGLG00000015669) #36	SMAD6 (ENSHGLG00000008453) #37
Rodentia_B	ANCESTRAL SPECIES	11	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Kangaroo rat	MODERN SPECIES	330	Pif1 (ENSDORG00000010176) #7	Plekho2 (ENSDORG00000010180) #8	Ankdd1a (ENSDORG00000008259) #9	Spg21 (ENSDORG00000003605) #10	Mtfmt (ENSDORG00000004684) #11	Slc51b (ENSDORG00000023591) #12	Rasl12 (ENSDORG00000000119) #13	Kbtbd13 (ENSDORG00000024320) #14	Ubap1l (ENSDORG00000024217) #15	Pdcd7 (ENSDORG00000008214)	Clpx (ENSDORG00000016116) #16	Cilp (ENSDORG00000014410) #17	Parp16 (ENSDORG00000028265) #18	Igdcc4 (ENSDORG00000015148) #20	Dpp8 (ENSDORG00000009050) #21	Hacd3 (ENSDORG00000009307) #22	Ints14 (ENSDORG00000009309) #23	Slc24a1 (ENSDORG00000007185) #24	Dennd4a (ENSDORG00000002146) #25	ENSDORG00000028034 #27	ENSDORG00000026125	Megf11 (ENSDORG00000001008) #28	Dis3l (ENSDORG00000014909) #29	Tipin (ENSDORG00000028988) #30	Map2k1 (ENSDORG00000001301) #31	Snapc5 (ENSDORG00000030051) #32	Rpl4 (ENSDORG00000016287) #33	Zwilch (ENSDORG00000016288) #35	Lctl (ENSDORG00000016291) #36	Smad6 (ENSDORG00000028234) #37	ENSDORG00000026894
Myomorpha	ANCESTRAL SPECIES	25	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Lesser Egyptian jerboa	MODERN SPECIES	92	Plekho2 (ENSJJAG00000014316) #8	Ankdd1a (ENSJJAG00000014309) #9	ENSJJAG00000013627 #10	Mtfmt (ENSJJAG00000021378) #11	Slc51b (ENSJJAG00000017452) #12	Rasl12 (ENSJJAG00000019387) #13	ENSJJAG00000011177 #14	ENSJJAG00000016922 #15	Pdcd7 (ENSJJAG00000012031)	Clpx (ENSJJAG00000012714) #16	Cilp (ENSJJAG00000012559) #17	Parp16 (ENSJJAG00000019303) #18	Igdcc3 (ENSJJAG00000010487) #19	Igdcc4 (ENSJJAG00000022092) #20	Dpp8 (ENSJJAG00000018252) #21	Hacd3 (ENSJJAG00000016608) #22	Ints14 (ENSJJAG00000005359) #23	Slc24a1 (ENSJJAG00000009344) #24	ENSJJAG00000012113 #25	ENSJJAG00000015445 #27	Megf11 (ENSJJAG00000023890) #28	ENSJJAG00000019234	Dis3l (ENSJJAG00000016147) #29	Tipin (ENSJJAG00000017947) #30	Map2k1 (ENSJJAG00000021452) #31	Snapc5 (ENSJJAG00000022013) #32	ENSJJAG00000013677 #33	Zwilch (ENSJJAG00000010189) #35	Lctl (ENSJJAG00000013579) #36	Smad6 (ENSJJAG00000019623) #37	Smad3 (ENSJJAG00000021414)
Muroidea	ANCESTRAL SPECIES	23	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145.kb #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Chinese hamster chok1gshd	MODERN SPECIES	284	Plekho2 (ENSCGRG00001003734) #8	Ankdd1a (ENSCGRG00001014311) #9	Spg21 (ENSCGRG00001022317) #10	Mtfmt (ENSCGRG00001010938) #11	Slc51b (ENSCGRG00001013856) #12	Rasl12 (ENSCGRG00001015470) #13	Kbtbd13 (ENSCGRG00001012125) #14	Ubap1l (ENSCGRG00001023243) #15	Pdcd7 (ENSCGRG00001011256)	Clpx (ENSCGRG00001020872) #16	Cilp (ENSCGRG00001023319) #17	Parp16 (ENSCGRG00001011381) #18	Igdcc3 (ENSCGRG00001015803) #19	Igdcc4 (ENSCGRG00001004819) #20	Dpp8 (ENSCGRG00001024771) #21	Hacd3 (ENSCGRG00001019214) #22	Ints14 (ENSCGRG00001022061) #23	Slc24a1 (ENSCGRG00001023812) #24	Dennd4a (ENSCGRG00001019979) #25	Rab11a (ENSCGRG00001023313) #27	Megf11 (ENSCGRG00001019210) #28	Dis3l (ENSCGRG00001017825) #29	Tipin (ENSCGRG00001018146) #30	Snapc5 (ENSCGRG00001013968) #32	Zwilch (ENSCGRG00001018206) #35	Lctl (ENSCGRG00001017716) #36	Smad6 (ENSCGRG00001002733) #37	Smad3 (ENSCGRG00001013999)	Aagab (ENSCGRG00001020082)	Iqch (ENSCGRG00001006084)	ENSCGRG00001000811
Golden Hamster	MODERN SPECIES	672	Ankdd1a (ENSMAUG00000009278) #9	Spg21 (ENSMAUG00000011488) #10	Mtfmt (ENSMAUG00000019476) #11	Slc51b (ENSMAUG00000016209) #12	Rasl12 (ENSMAUG00000021367) #13	Kbtbd13 (ENSMAUG00000007549) #14	Ubap1l (ENSMAUG00000019477) #15	Pdcd7 (ENSMAUG00000010175)	Clpx (ENSMAUG00000018798) #16	ENSMAUG00000009833	Cilp (ENSMAUG00000019346) #17	Parp16 (ENSMAUG00000014432) #18	Igdcc3 (ENSMAUG00000019761) #19	Igdcc4 (ENSMAUG00000021589) #20	Dpp8 (ENSMAUG00000020059) #21	Hacd3 (ENSMAUG00000004278) #22	Ints14 (ENSMAUG00000020937) #23	Slc24a1 (ENSMAUG00000012813) #24	Dennd4a (ENSMAUG00000018527) #25	Rab11a (ENSMAUG00000018551) #27	Megf11 (ENSMAUG00000003129) #28	Dis3l (ENSMAUG00000008265) #29	Tipin (ENSMAUG00000012421) #30	Map2k1 (ENSMAUG00000011379) #31	Snapc5 (ENSMAUG00000008645) #32	Rpl4 (ENSMAUG00000018867) #33	Zwilch (ENSMAUG00000021210) #35	Lctl (ENSMAUG00000009957) #36	Smad6 (ENSMAUG00000009859) #37	Smad3 (ENSMAUG00000022258)	Aagab (ENSMAUG00000005383)
Cricetidae_B	ANCESTRAL SPECIES	24	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Northern American deer mouse	MODERN SPECIES	20	Plekho2 (ENSPEMG00000020353) #8	Ankdd1a (ENSPEMG00000020958) #9	Spg21 (ENSPEMG00000021006) #10	Mtfmt (ENSPEMG00000021536) #11	Slc51b (ENSPEMG00000030201) #12	Rasl12 (ENSPEMG00000026265) #13	Kbtbd13 (ENSPEMG00000005949) #14	Ubap1l (ENSPEMG00000017986) #15	Pdcd7 (ENSPEMG00000001830)	Clpx (ENSPEMG00000021528) #16	Cilp (ENSPEMG00000021273) #17	Parp16 (ENSPEMG00000022071) #18	Igdcc3 (ENSPEMG00000021097) #19	Igdcc4 (ENSPEMG00000020857) #20	Dpp8 (ENSPEMG00000024195) #21	Hacd3 (ENSPEMG00000008076) #22	Ints14 (ENSPEMG00000008550) #23	Slc24a1 (ENSPEMG00000022814) #24	Dennd4a (ENSPEMG00000022452) #25	ENSPEMG00000021125 #27	Megf11 (ENSPEMG00000017797) #28	Dis3l (ENSPEMG00000001213) #29	Tipin (ENSPEMG00000002370) #30	Map2k1 (ENSPEMG00000007282) #31	Snapc5 (ENSPEMG00000007852) #32	Rpl4 (ENSPEMG00000012064) #33	Zwilch (ENSPEMG00000014485) #35	Lctl (ENSPEMG00000016229) #36	Smad6 (ENSPEMG00000017040) #37	Smad3 (ENSPEMG00000028676)	Aagab (ENSPEMG00000018465)
Prairie vole	MODERN SPECIES	13	Ankdd1a (ENSMOCG00000010903) #9	ENSMOCG00000008827	Spg21 (ENSMOCG00000018012) #10	Mtfmt (ENSMOCG00000022110) #11	Slc51b (ENSMOCG00000016544) #12	Rasl12 (ENSMOCG00000022051) #13	Kbtbd13 (ENSMOCG00000001263) #14	Ubap1l (ENSMOCG00000021453) #15	Pdcd7 (ENSMOCG00000007159)	Clpx (ENSMOCG00000011980) #16	Cilp (ENSMOCG00000022194) #17	Parp16 (ENSMOCG00000014635) #18	Igdcc3 (ENSMOCG00000017628) #19	Igdcc4 (ENSMOCG00000017733) #20	Dpp8 (ENSMOCG00000018103) #21	Hacd3 (ENSMOCG00000004995) #22	Ints14 (ENSMOCG00000020364) #23	Slc24a1 (ENSMOCG00000002968) #24	Dennd4a (ENSMOCG00000008521) #25	Rab11a (ENSMOCG00000021138) #27	Megf11 (ENSMOCG00000003573) #28	Dis3l (ENSMOCG00000005278) #29	Tipin (ENSMOCG00000010343) #30	Map2k1 (ENSMOCG00000013072) #31	Snapc5 (ENSMOCG00000015348) #32	ENSMOCG00000021901 #33	Zwilch (ENSMOCG00000017159) #35	Lctl (ENSMOCG00000004744) #36	Smad6 (ENSMOCG00000014458) #37	Smad3 (ENSMOCG00000018490)	Aagab (ENSMOCG00000021340)
Murinae	ANCESTRAL SPECIES	3	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Mus	ANCESTRAL SPECIES	4	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Mus_A	ANCESTRAL SPECIES	4	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828 #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b	ENSGT00390000007218
Mus_B	ANCESTRAL SPECIES	3	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828.s #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000154925.c.a	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b
Mouse	MODERN SPECIES	18	Plekho2 (ENSMUSG00000050721) #8	Ankdd1a (ENSMUSG00000066510) #9	Spg21 (ENSMUSG00000032388) #10	Mtfmt (ENSMUSG00000059183) #11	Slc51b (ENSMUSG00000053862) #12	Rasl12 (ENSMUSG00000041696) #13	Kbtbd13 (ENSMUSG00000054978) #14	Ubap1l (ENSMUSG00000086228) #15	Pdcd7 (ENSMUSG00000041837)	Clpx (ENSMUSG00000015357) #16	Cilp (ENSMUSG00000042254) #17	Parp16 (ENSMUSG00000032392) #18	Igdcc3 (ENSMUSG00000032394) #19	Igdcc4 (ENSMUSG00000032816) #20	Dpp8 (ENSMUSG00000032393) #21	Hacd3 (ENSMUSG00000033629) #22	Ints14 (ENSMUSG00000034263) #23	Slc24a1 (ENSMUSG00000034452) #24	Dennd4a (ENSMUSG00000053641) #25	Rab11a (ENSMUSG00000004771) #27	Megf11 (ENSMUSG00000036466) #28	Dis3l (ENSMUSG00000032396) #29	Tipin (ENSMUSG00000032397) #30	Uchl4 (ENSMUSG00000035337)	Map2k1 (ENSMUSG00000004936) #31	Snapc5 (ENSMUSG00000032398) #32	Rpl4 (ENSMUSG00000032399) #33	Zwilch (ENSMUSG00000032400) #35	Lctl (ENSMUSG00000032401) #36	Smad6 (ENSMUSG00000036867) #37	Smad3 (ENSMUSG00000032402)
Mus_C	ANCESTRAL SPECIES	8	ENSGT00530000063760.a #8	ENSGT00940000154170.B #9	ENSGT00390000007857 #10	ENSGT00390000017828.s #11	ENSGT00390000010409 #12	ENSGT00940000160167 #13	ENSGT00940000161629 #14	ENSGT00390000008092.b #15	ENSGT00390000017392	ENSGT00390000017625 #16	ENSGT00390000008152.B.b #17	ENSGT00950000183129.a #18	ENSGT00940000156969 #19	ENSGT00940000159637 #20	ENSGT00940000160717 #21	ENSGT00530000062962.b.a #22	ENSGT00390000009486 #23	ENSGT01030000234532.B.e.b #24	ENSGT00940000155836.B #25	ENSGT00940000154914 #27	ENSGT00940000155333.B #28	ENSGT00530000063106.B #29	ENSGT00390000005764 #30	ENSGT00940000154925.c.a	ENSGT00940000153487.b.b #31	ENSGT00390000010331 #32	ENSGT00390000018145 #33	ENSGT00390000013696 #35	ENSGT00940000157369 #36	ENSGT00940000158146 #37	ENSGT00940000153499.b.b
Steppe mouse	MODERN SPECIES	3365	Spg21 (ENSMSIG00000005730) #10	Mtfmt (ENSMSIG00000005704) #11	Slc51b (ENSMSIG00000005686) #12	Rasl12 (ENSMSIG00000005656) #13	Kbtbd13 (ENSMSIG00000005647) #14	ENSMSIG00000005605 #15	Pdcd7 (ENSMSIG00000005596)	ENSMSIG00000005574	ENSMSIG00000005568	Clpx (ENSMSIG00000005427) #16	Cilp (ENSMSIG00000005391) #17	Parp16 (ENSMSIG00000005362) #18	Igdcc3 (ENSMSIG00000005288) #19	Igdcc4 (ENSMSIG00000005197) #20	Dpp8 (ENSMSIG00000005153) #21	Hacd3 (ENSMSIG00000005101) #22	Ints14 (ENSMSIG00000005077) #23	Slc24a1 (ENSMSIG00000005039) #24	Dennd4a (ENSMSIG00000004975) #25	Rab11a (ENSMSIG00000004938) #27	Megf11 (ENSMSIG00000004481) #28	Dis3l (ENSMSIG00000004353) #29	Tipin (ENSMSIG00000004296) #30	Uchl4 (ENSMSIG00000004289)	Map2k1 (ENSMSIG00000004246) #31	Snapc5 (ENSMSIG00000004231) #32	Rpl4 (ENSMSIG00000004124) #33	Zwilch (ENSMSIG00000003872) #35	Lctl (ENSMSIG00000003776) #36	ENSMSIG00000003769	ENSMSIG00000003749
spretus	MODERN SPECIES	18	Plekho2 (MGP_SPRETEiJ_G0033504) #8	Ankdd1a (MGP_SPRETEiJ_G0033503) #9	Spg21 (MGP_SPRETEiJ_G0033502) #10	Mtfmt (MGP_SPRETEiJ_G0033501) #11	Slc51b (MGP_SPRETEiJ_G0033500) #12	Rasl12 (MGP_SPRETEiJ_G0033499) #13	Kbtbd13 (MGP_SPRETEiJ_G0033498) #14	Ubap1l (MGP_SPRETEiJ_G0033497) #15	Pdcd7 (MGP_SPRETEiJ_G0033496)	Clpx (MGP_SPRETEiJ_G0033495) #16	Cilp (MGP_SPRETEiJ_G0033494) #17	Parp16 (MGP_SPRETEiJ_G0033493) #18	Igdcc3 (MGP_SPRETEiJ_G0033492) #19	Igdcc4 (MGP_SPRETEiJ_G0033491) #20	Dpp8 (MGP_SPRETEiJ_G0033490) #21	Hacd3 (MGP_SPRETEiJ_G0033489) #22	Ints14 (MGP_SPRETEiJ_G0033488) #23	Slc24a1 (MGP_SPRETEiJ_G0033487) #24	Dennd4a (MGP_SPRETEiJ_G0033486) #25	Rab11a (MGP_SPRETEiJ_G0033485) #27	Megf11 (MGP_SPRETEiJ_G0033484) #28	Dis3l (MGP_SPRETEiJ_G0033483) #29	Tipin (MGP_SPRETEiJ_G0033482) #30	MGP_SPRETEiJ_G0033481	Map2k1 (MGP_SPRETEiJ_G0033480) #31	Snapc5 (MGP_SPRETEiJ_G0033479) #32	Rpl4 (MGP_SPRETEiJ_G0033478) #33	Zwilch (MGP_SPRETEiJ_G0033477) #35	Lctl (MGP_SPRETEiJ_G0033476) #36	Smad6 (MGP_SPRETEiJ_G0033475) #37	Smad3 (MGP_SPRETEiJ_G0033474)
Ryukyu mouse	MODERN SPECIES	18	Plekho2 (MGP_CAROLIEiJ_G0032365) #8	Ankdd1a (MGP_CAROLIEiJ_G0032364) #9	Spg21 (MGP_CAROLIEiJ_G0032363) #10	Mtfmt (MGP_CAROLIEiJ_G0032362) #11	Slc51b (MGP_CAROLIEiJ_G0032361) #12	Rasl12 (MGP_CAROLIEiJ_G0032360) #13	Kbtbd13 (MGP_CAROLIEiJ_G0032359) #14	Ubap1l (MGP_CAROLIEiJ_G0032358) #15	Pdcd7 (MGP_CAROLIEiJ_G0032357)	Clpx (MGP_CAROLIEiJ_G0032356) #16	MGP_CAROLIEiJ_G0032355	Parp16 (MGP_CAROLIEiJ_G0032354) #18	Igdcc3 (MGP_CAROLIEiJ_G0032353) #19	Igdcc4 (MGP_CAROLIEiJ_G0032352) #20	Dpp8 (MGP_CAROLIEiJ_G0032351) #21	Hacd3 (MGP_CAROLIEiJ_G0032350) #22	Ints14 (MGP_CAROLIEiJ_G0032349) #23	Slc24a1 (MGP_CAROLIEiJ_G0032348) #24	Dennd4a (MGP_CAROLIEiJ_G0032347) #25	Rab11a (MGP_CAROLIEiJ_G0032346) #27	Megf11 (MGP_CAROLIEiJ_G0032345) #28	Dis3l (MGP_CAROLIEiJ_G0032344) #29	Tipin (MGP_CAROLIEiJ_G0032343) #30	MGP_CAROLIEiJ_G0032342	Map2k1 (MGP_CAROLIEiJ_G0032341) #31	Snapc5 (MGP_CAROLIEiJ_G0032340) #32	Rpl4 (MGP_CAROLIEiJ_G0032339) #33	Zwilch (MGP_CAROLIEiJ_G0032338) #35	Lctl (MGP_CAROLIEiJ_G0032337) #36	Smad6 (MGP_CAROLIEiJ_G0032336) #37	Smad3 (MGP_CAROLIEiJ_G0032335)
Shrew mouse	MODERN SPECIES	1	Plekho2 (MGP_PahariEiJ_G0015230) #8	Ankdd1a (MGP_PahariEiJ_G0015229) #9	Spg21 (MGP_PahariEiJ_G0015228) #10	Mtfmt (MGP_PahariEiJ_G0015227) #11	Slc51b (MGP_PahariEiJ_G0015226) #12	Rasl12 (MGP_PahariEiJ_G0015225) #13	Kbtbd13 (MGP_PahariEiJ_G0015224) #14	Ubap1l (MGP_PahariEiJ_G0015223) #15	Pdcd7 (MGP_PahariEiJ_G0015222)	Clpx (MGP_PahariEiJ_G0015221) #16	MGP_PahariEiJ_G0015220	Parp16 (MGP_PahariEiJ_G0015219) #18	MGP_PahariEiJ_G0015218 #19	Igdcc4 (MGP_PahariEiJ_G0015217) #20	Dpp8 (MGP_PahariEiJ_G0015216) #21	Hacd3 (MGP_PahariEiJ_G0015215) #22	Ints14 (MGP_PahariEiJ_G0015214) #23	Slc24a1 (MGP_PahariEiJ_G0015213) #24	Dennd4a (MGP_PahariEiJ_G0015212) #25	Rab11a (MGP_PahariEiJ_G0015211) #27	Megf11 (MGP_PahariEiJ_G0015210) #28	Dis3l (MGP_PahariEiJ_G0015209) #29	Tipin (MGP_PahariEiJ_G0015208) #30	Map2k1 (MGP_PahariEiJ_G0015207) #31	Snapc5 (MGP_PahariEiJ_G0015206) #32	Rpl4 (MGP_PahariEiJ_G0015205) #33	Zwilch (MGP_PahariEiJ_G0015204) #35	Smad6 (MGP_PahariEiJ_G0015202) #37	Smad3 (MGP_PahariEiJ_G0015201)	Aagab (MGP_PahariEiJ_G0015200)	Iqch (MGP_PahariEiJ_G0015199)
Rat	MODERN SPECIES	18	Ankdd1a (ENSRNOG00000015554) #9	Spg21 (ENSRNOG00000015019) #10	Mtfmt (ENSRNOG00000014602) #11	Slc51b (ENSRNOG00000028889) #12	Rasl12 (ENSRNOG00000032339) #13	AABR07070456.1 (ENSRNOG00000014383) #14	Ubap1l (ENSRNOG00000050979) #15	Pdcd7 (ENSRNOG00000014340)	Clpx (ENSRNOG00000030225) #16	Cilp (ENSRNOG00000029911) #17	Parp16 (ENSRNOG00000029127) #18	ENSRNOG00000063066	Igdcc3 (ENSRNOG00000030800) #19	Igdcc4 (ENSRNOG00000033496) #20	Dpp8 (ENSRNOG00000019105) #21	Hacd3 (ENSRNOG00000030232) #22	Ints14 (ENSRNOG00000012469) #23	Slc24a1 (ENSRNOG00000052051) #24	Dennd4a (ENSRNOG00000011739) #25	LOC120094392 (ENSRNOG00000071140)	Rab11a (ENSRNOG00000011302) #27	Megf11 (ENSRNOG00000010634) #28	Dis3l (ENSRNOG00000010537) #29	Tipin (ENSRNOG00000043068) #30	Map2k1 (ENSRNOG00000010176) #31	Rpl4 (ENSRNOG00000009378) #33	Zwilch (ENSRNOG00000009303) #35	Lctl (ENSRNOG00000009193) #36	Smad6 (ENSRNOG00000009173) #37	Smad3 (ENSRNOG00000008620)	Aagab (ENSRNOG00000008424)
Upper Galilee mountains blind mole rat	MODERN SPECIES	955	ENSNGAG00000003639	Ankdd1a (ENSNGAG00000009321) #9	ENSNGAG00000021527 #10	Mtfmt (ENSNGAG00000023307) #11	Slc51b (ENSNGAG00000016122) #12	Rasl12 (ENSNGAG00000019976) #13	ENSNGAG00000011880 #14	Ubap1l (ENSNGAG00000022357) #15	Pdcd7 (ENSNGAG00000018415)	Clpx (ENSNGAG00000001488) #16	Cilp (ENSNGAG00000019472) #17	Parp16 (ENSNGAG00000004884) #18	Igdcc3 (ENSNGAG00000012915) #19	Igdcc4 (ENSNGAG00000022064) #20	Dpp8 (ENSNGAG00000019579) #21	Hacd3 (ENSNGAG00000016924) #22	Ints14 (ENSNGAG00000007105) #23	Slc24a1 (ENSNGAG00000010674) #24	ENSNGAG00000022619 #25	Rab11a (ENSNGAG00000013726) #27	Megf11 (ENSNGAG00000011352) #28	Dis3l (ENSNGAG00000017008) #29	Tipin (ENSNGAG00000018237) #30	Map2k1 (ENSNGAG00000006894) #31	Snapc5 (ENSNGAG00000006133) #32	ENSNGAG00000006653 #33	Zwilch (ENSNGAG00000016626) #35	Lctl (ENSNGAG00000012911) #36	Smad6 (ENSNGAG00000021223) #37	ENSNGAG00000022756	Smad3 (ENSNGAG00000023535)