Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000175494	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00960000187690	ENSGT00940000165267	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000175494	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00960000187690	ENSGT00940000165267	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695
Primates	ANCESTRAL SPECIES	10	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Strepsirrhini	ANCESTRAL SPECIES	18	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h.g	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Bushbaby	MODERN SPECIES	198	ENSOGAG00000009543 #7	FIP1L1 (ENSOGAG00000009545) #8	LNX1 (ENSOGAG00000009552) #9	CHIC2 (ENSOGAG00000009570) #10	GSX2 (ENSOGAG00000015271) #11	PDGFRA (ENSOGAG00000012544) #12	ENSOGAG00000025123 #13	KIT (ENSOGAG00000009550) #14	KDR (ENSOGAG00000013598) #15	SRD5A3 (ENSOGAG00000012340) #16	TMEM165 (ENSOGAG00000012462) #17	CLOCK (ENSOGAG00000012464) #18	PDCL2 (ENSOGAG00000012475) #19	ENSOGAG00000031389 #20	EXOC1L (ENSOGAG00000005859) #21	EXOC1 (ENSOGAG00000005861) #22
Lemuriformes	ANCESTRAL SPECIES	39	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h.g	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Mouse lemur	MODERN SPECIES	130					SLAIN2 (ENSMICG00000011592)	ENSMICG00000030147	PDGFRA (ENSMICG00000014660) #12	KIT (ENSMICG00000000829) #14	KDR (ENSMICG00000007310) #15	SRD5A3 (ENSMICG00000000317) #16	TMEM165 (ENSMICG00000000319) #17	CLOCK (ENSMICG00000000320) #18	PDCL2 (ENSMICG00000004180) #19	NMU (ENSMICG00000004184)	EXOC1L (ENSMICG00000043366) #21	EXOC1 (ENSMICG00000000681) #22	CEP135 (ENSMICG00000033892)	CRACD (ENSMICG00000034949)	ENSMICG00000033928	AASDH (ENSMICG00000008484)	ENSMICG00000044633	PAICS (ENSMICG00000036099)	SRP72 (ENSMICG00000008507)	ENSMICG00000036183	THEGL (ENSMICG00000042879)	HOPX (ENSMICG00000026936)	ENSMICG00000045362	REST (ENSMICG00000028880)	NOA1 (ENSMICG00000015150)	POLR2B (ENSMICG00000015166)	ENSMICG00000046078
Lemuriformes_a	ANCESTRAL SPECIES	30	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h.g	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Coquerels sifaka	MODERN SPECIES	219		ENSPCOG00000014837 #7	FIP1L1 (ENSPCOG00000021280) #8	LNX1 (ENSPCOG00000019418) #9	CHIC2 (ENSPCOG00000021210) #10	GSX2 (ENSPCOG00000023707) #11	PDGFRA (ENSPCOG00000025472) #12	KIT (ENSPCOG00000024040) #14	KDR (ENSPCOG00000013368) #15	SRD5A3 (ENSPCOG00000028827) #16	TMEM165 (ENSPCOG00000027016) #17	CLOCK (ENSPCOG00000019043) #18	PDCL2 (ENSPCOG00000008474) #19	NMU (ENSPCOG00000009907)	EXOC1L (ENSPCOG00000012908) #21	ENSPCOG00000022570 #22	ENSPCOG00000025929	CRACD (ENSPCOG00000023584)	AASDH (ENSPCOG00000017744)	ENSPCOG00000018898	PAICS (ENSPCOG00000020490)	SRP72 (ENSPCOG00000018953)	ENSPCOG00000011023	ENSPCOG00000016025	HOPX (ENSPCOG00000020272)	ENSPCOG00000026396	ENSPCOG00000025761	NOA1 (ENSPCOG00000017583)	ENSPCOG00000019046	ENSPCOG00000009281	IGFBP7 (ENSPCOG00000017978)
Greater bamboo lemur	MODERN SPECIES	178	RASL11B (ENSPSMG00000021259)	SCFD2 (ENSPSMG00000021233) #7	FIP1L1 (ENSPSMG00000020888) #8	LNX1 (ENSPSMG00000020471) #9	CHIC2 (ENSPSMG00000020440) #10	GSX2 (ENSPSMG00000020423) #11	PDGFRA (ENSPSMG00000020413) #12	KIT (ENSPSMG00000020340) #14	KDR (ENSPSMG00000020248) #15	SRD5A3 (ENSPSMG00000020219) #16	TMEM165 (ENSPSMG00000020185) #17	CLOCK (ENSPSMG00000020165) #18	PDCL2 (ENSPSMG00000020136) #19	NMU (ENSPSMG00000020128)	EXOC1L (ENSPSMG00000020116) #21	EXOC1 (ENSPSMG00000020052) #22	CEP135 (ENSPSMG00000019872)	CRACD (ENSPSMG00000019816)	AASDH (ENSPSMG00000019697)	ENSPSMG00000019626	PPAT (ENSPSMG00000019621)	ENSPSMG00000019595	SRP72 (ENSPSMG00000019534)	ARL9 (ENSPSMG00000019462)	THEGL (ENSPSMG00000019443)	HOPX (ENSPSMG00000019432)	ENSPSMG00000019427	REST (ENSPSMG00000019403)	NOA1 (ENSPSMG00000019361)	POLR2B (ENSPSMG00000019205)	IGFBP7 (ENSPSMG00000019081)
Haplorrhini	ANCESTRAL SPECIES	23	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Tarsier	MODERN SPECIES	4839												PEX26 (ENSTSYG00000027167)	TUBA8 (ENSTSYG00000030313)	USP18 (ENSTSYG00000008807)	EXOC1L (ENSTSYG00000034248) #21	EXOC1 (ENSTSYG00000013145) #22	CEP135 (ENSTSYG00000002240)
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Catarrhini	ANCESTRAL SPECIES	14	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000013770.d	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d.f	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00930000150941.x.b.b
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000013770.d	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00910000147929	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428.w	ENSGT00390000010172.s	ENSGT00390000013264.d.f.b	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C
Hominidae	ANCESTRAL SPECIES	12	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000013770.d	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00910000147929	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428.w	ENSGT00390000010172.s	ENSGT00390000013264.d.f.b	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00390000015645.r	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT01060000248700	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000013770.d	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00910000147929	ENSGT00940000161471	ENSGT00440000033811	ENSGT00910000148425	ENSGT00390000003428.w	ENSGT00390000010172.s	ENSGT00390000013264.d.f.b	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00390000015645.r	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695
Gorilla	MODERN SPECIES	17	LNX1 (ENSGGOG00000010056) #9	ENSGGOG00000010061	CHIC2 (ENSGGOG00000027084) #10	ENSGGOG00000039849	GSX2 (ENSGGOG00000007928) #11	PDGFRA (ENSGGOG00000010615) #12	ENSGGOG00000026556	KIT (ENSGGOG00000015440) #14	KDR (ENSGGOG00000012821) #15	SRD5A3 (ENSGGOG00000022870) #16	TMEM165 (ENSGGOG00000015618) #17	CLOCK (ENSGGOG00000005753) #18	PDCL2 (ENSGGOG00000007908) #19	NMU (ENSGGOG00000007920)	EXOC1L (ENSGGOG00000038477) #21	EXOC1 (ENSGGOG00000026473) #22	CEP135 (ENSGGOG00000003682)	ENSGGOG00000043121	CRACD (ENSGGOG00000001148)	AASDH (ENSGGOG00000023372)	PPAT (ENSGGOG00000004608)	PAICS (ENSGGOG00000024392)	SRP72 (ENSGGOG00000013234)	ENSGGOG00000006178	THEGL (ENSGGOG00000040755)	ENSGGOG00000004631	ENSGGOG00000014511	ENSGGOG00000024150	REST (ENSGGOG00000002165)	NOA1 (ENSGGOG00000040999)	POLR2B (ENSGGOG00000034986)
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00390000011192 #7	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000013770.d	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00910000147929	ENSGT00940000161471	ENSGT00440000033811	ENSGT00910000148425	ENSGT00390000003428.w	ENSGT00390000010172.s	ENSGT00390000013264.d.f.b	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00390000015645.r	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695
Pan	ANCESTRAL SPECIES	7	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000013770.d	ENSGT00390000003601.b #10	ENSGT00950000182965.a.b.b.a	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00910000147929	ENSGT00940000161471	ENSGT00440000033811	ENSGT00910000148425	ENSGT00390000003428.w	ENSGT00390000010172.s	ENSGT00390000013264.d.f.b	ENSGT00940000159397	ENSGT00390000017970.n.b	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00390000015645.r	ENSGT00530000064285	ENSGT00940000155341.h
Chimpanzee	MODERN SPECIES	17	ENSPTRG00000048363	LNX1 (ENSPTRG00000016062) #9	CHIC2 (ENSPTRG00000016064) #10	ENSPTRG00000047699	GSX2 (ENSPTRG00000016065) #11	ENSPTRG00000050400	PDGFRA (ENSPTRG00000016066) #12	KIT (ENSPTRG00000016067) #14	KDR (ENSPTRG00000016069) #15	SRD5A3 (ENSPTRG00000016070) #16	TMEM165 (ENSPTRG00000016071) #17	CLOCK (ENSPTRG00000016072) #18	PDCL2 (ENSPTRG00000016073) #19	NMU (ENSPTRG00000016074)	EXOC1L (ENSPTRG00000046040) #21	EXOC1 (ENSPTRG00000023159) #22	CEP135 (ENSPTRG00000016077)	ENSPTRG00000045977	CRACD (ENSPTRG00000016078)	ENSPTRG00000044386	AASDH (ENSPTRG00000016079)	PPAT (ENSPTRG00000016080)	PAICS (ENSPTRG00000016081)	ENSPTRG00000048466	ARL9 (ENSPTRG00000023347)	ENSPTRG00000046883	THEGL (ENSPTRG00000049168)	HOPX (ENSPTRG00000016084)	ENSPTRG00000046323	SPINK2 (ENSPTRG00000016086)	REST (ENSPTRG00000016087)
Bonobo	MODERN SPECIES	17	ENSPPAG00000032520	LNX1 (ENSPPAG00000037579) #9	CHIC2 (ENSPPAG00000010433) #10	ENSPPAG00000032307	GSX2 (ENSPPAG00000030659) #11	ENSPPAG00000039875	PDGFRA (ENSPPAG00000031952) #12	KIT (ENSPPAG00000032952) #14	KDR (ENSPPAG00000042774) #15	SRD5A3 (ENSPPAG00000028976) #16	TMEM165 (ENSPPAG00000035865) #17	CLOCK (ENSPPAG00000029615) #18	PDCL2 (ENSPPAG00000038480) #19	NMU (ENSPPAG00000038124)	EXOC1L (ENSPPAG00000028553) #21	EXOC1 (ENSPPAG00000043855) #22	CEP135 (ENSPPAG00000043866)	ENSPPAG00000042190	CRACD (ENSPPAG00000032829)	ENSPPAG00000035697	AASDH (ENSPPAG00000031321)	ENSPPAG00000041564	PPAT (ENSPPAG00000041710)	PAICS (ENSPPAG00000035354)	SRP72 (ENSPPAG00000042265)	ENSPPAG00000024206	ENSPPAG00000012871	THEGL (ENSPPAG00000040982)	ENSPPAG00000029565	ENSPPAG00000040689	ENSPPAG00000037067
Human	MODERN SPECIES	16	FIP1L1 (ENSG00000145216) #8	ENSG00000282278	LNX1 (ENSG00000072201) #9	CHIC2 (ENSG00000109220) #10	GSX2 (ENSG00000180613) #11	PDGFRA (ENSG00000134853) #12	KIT (ENSG00000157404) #14	KDR (ENSG00000128052) #15	SRD5A3 (ENSG00000128039) #16	ENSG00000288695	TMEM165 (ENSG00000134851) #17	CLOCK (ENSG00000134852) #18	PDCL2 (ENSG00000163440) #19	NMU (ENSG00000109255)	EXOC1L (ENSG00000250821) #21	EXOC1 (ENSG00000090989) #22	CEP135 (ENSG00000174799)	CRACD (ENSG00000109265)	AASDH (ENSG00000157426)	PPAT (ENSG00000128059)	PAICS (ENSG00000128050)	SRP72 (ENSG00000174780)	ARL9 (ENSG00000196503)	THEGL (ENSG00000249693)	HOPX (ENSG00000171476)	SPINK2 (ENSG00000128040)	REST (ENSG00000084093)	NOA1 (ENSG00000084092)	POLR2B (ENSG00000047315)	IGFBP7 (ENSG00000163453)	ADGRL3 (ENSG00000150471)
Orangutan	MODERN SPECIES	17	RASL11B (ENSPPYG00000037548)	SCFD2 (ENSPPYG00000014774) #7	FIP1L1 (ENSPPYG00000014773) #8	LNX1 (ENSPPYG00000014772) #9	CHIC2 (ENSPPYG00000014770) #10	GSX2 (ENSPPYG00000014769) #11	PDGFRA (ENSPPYG00000014767) #12	KIT (ENSPPYG00000014766) #14	KDR (ENSPPYG00000014765) #15	SRD5A3 (ENSPPYG00000014764) #16	TMEM165 (ENSPPYG00000014763) #17	CLOCK (ENSPPYG00000014762) #18	PDCL2 (ENSPPYG00000014761) #19	NMU (ENSPPYG00000014760)	EXOC1L (ENSPPYG00000014759) #21	EXOC1 (ENSPPYG00000014758) #22	ENSPPYG00000014757	CRACD (ENSPPYG00000014756)	AASDH (ENSPPYG00000014755)	ENSPPYG00000036324	PPAT (ENSPPYG00000029568)	PAICS (ENSPPYG00000014753)	SRP72 (ENSPPYG00000014752)	ARL9 (ENSPPYG00000014751)	ENSPPYG00000014750	THEGL (ENSPPYG00000032046)	ENSPPYG00000039212	ENSPPYG00000014747	ENSPPYG00000031462	REST (ENSPPYG00000037151)	NOA1 (ENSPPYG00000014744)
Gibbon	MODERN SPECIES	24	SCFD2 (ENSNLEG00000008185) #7	FIP1L1 (ENSNLEG00000008187) #8	LNX1 (ENSNLEG00000008256) #9	ENSNLEG00000029752	GSX2 (ENSNLEG00000008278) #11	ENSNLEG00000030233	PDGFRA (ENSNLEG00000008285) #12	KIT (ENSNLEG00000008295) #14	KDR (ENSNLEG00000008365) #15	SRD5A3 (ENSNLEG00000032360) #16	TMEM165 (ENSNLEG00000008484) #17	CLOCK (ENSNLEG00000008499) #18	PDCL2 (ENSNLEG00000008545) #19	NMU (ENSNLEG00000008552)	EXOC1L (ENSNLEG00000032675) #21	EXOC1 (ENSNLEG00000008574) #22	CEP135 (ENSNLEG00000008640)	ENSNLEG00000036094	CRACD (ENSNLEG00000008674)	AASDH (ENSNLEG00000008681)	PPAT (ENSNLEG00000008762)	PAICS (ENSNLEG00000008786)	SRP72 (ENSNLEG00000008806)	ENSNLEG00000034401	THEGL (ENSNLEG00000035230)	HOPX (ENSNLEG00000033904)	ENSNLEG00000008829	REST (ENSNLEG00000008836)	NOA1 (ENSNLEG00000008853)	POLR2B (ENSNLEG00000008874)	ENSNLEG00000031259
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00390000011192 #7	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00940000155193.a.a.f.b	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d.f	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00940000154433.a.b.l.a	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00940000155193.a.a.f.b	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d.f	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00940000154433.a.b.l.a	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d.f	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00930000150941.x.b.b
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00940000154433.a.b.l.a	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d.f	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00930000150941.x.b.b
Cercopithecinae_d	ANCESTRAL SPECIES	124	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00390000004690.a.b.h	ENSGT00940000154509	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00940000154433.a.b.l.a	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00390000003248.a.a.a.b	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d.f	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Sooty mangabey	MODERN SPECIES	180	GSX2 (ENSCATG00000039825) #11	ENSCATG00000036558	ENSCATG00000038972	PDGFRA (ENSCATG00000018830) #12	KIT (ENSCATG00000004601) #14	KDR (ENSCATG00000026660) #15	ENSCATG00000035741	SRD5A3 (ENSCATG00000040052) #16	TMEM165 (ENSCATG00000036895) #17	ENSCATG00000017377	CLOCK (ENSCATG00000002646) #18	PDCL2 (ENSCATG00000041890) #19	ENSCATG00000040815	NMU (ENSCATG00000000632)	EXOC1L (ENSCATG00000029322) #21	EXOC1 (ENSCATG00000043473) #22	CEP135 (ENSCATG00000012612)	ENSCATG00000020059	CRACD (ENSCATG00000034559)	AASDH (ENSCATG00000009332)	PPAT (ENSCATG00000000386)	PAICS (ENSCATG00000036203)	SRP72 (ENSCATG00000008072)	ARL9 (ENSCATG00000031380)	THEGL (ENSCATG00000041268)	ENSCATG00000032783
Drill	MODERN SPECIES	1090		DOCK3 (ENSMLEG00000040761)	MANF (ENSMLEG00000038782)	ENSMLEG00000029304	DCAF1 (ENSMLEG00000030256)	KIT (ENSMLEG00000040087) #14	KDR (ENSMLEG00000038992) #15	SRD5A3 (ENSMLEG00000036587) #16	TMEM165 (ENSMLEG00000036618) #17	ENSMLEG00000026848	CLOCK (ENSMLEG00000032159) #18	PDCL2 (ENSMLEG00000032563) #19	ENSMLEG00000033206	NMU (ENSMLEG00000001068)	EXOC1L (ENSMLEG00000012366) #21	EXOC1 (ENSMLEG00000031006) #22	CEP135 (ENSMLEG00000042514)	ENSMLEG00000016421
Olive baboon	MODERN SPECIES	13	ENSPANG00000011213	LNX1 (ENSPANG00000012441) #9	CHIC2 (ENSPANG00000019862) #10	GSX2 (ENSPANG00000021441) #11	PDGFRA (ENSPANG00000021718) #12	KIT (ENSPANG00000025525) #14	KDR (ENSPANG00000009816) #15	SRD5A3 (ENSPANG00000023285) #16	TMEM165 (ENSPANG00000008925) #17	CLOCK (ENSPANG00000006882) #18	PDCL2 (ENSPANG00000007651) #19	NMU (ENSPANG00000024021)	ENSPANG00000040931	ENSPANG00000039918	EXOC1L (ENSPANG00000049134) #21	EXOC1 (ENSPANG00000009817) #22	CEP135 (ENSPANG00000007654)	ENSPANG00000033113	CRACD (ENSPANG00000006883)	AASDH (ENSPANG00000018913)	PPAT (ENSPANG00000012149)	PAICS (ENSPANG00000017692)	SRP72 (ENSPANG00000005495)	ARL9 (ENSPANG00000022288)	THEGL (ENSPANG00000013419)	ENSPANG00000050248	ENSPANG00000044703	HOPX (ENSPANG00000007783)	ENSPANG00000038978	ENSPANG00000040417	ENSPANG00000048201
Macaca	ANCESTRAL SPECIES	26	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00940000154433.a.b.l.a	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d.f	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00930000150941.x.b.b
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d.f	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT01030000240150	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C
Rhesus	MODERN SPECIES	15	SCFD2 (ENSMMUG00000017393) #7	LNX1 (ENSMMUG00000017401) #9	CHIC2 (ENSMMUG00000050730) #10	GSX2 (ENSMMUG00000048263) #11	PDGFRA (ENSMMUG00000017395) #12	ENSMMUG00000059659	ENSMMUG00000060048	KIT (ENSMMUG00000060342) #14	KDR (ENSMMUG00000012669) #15	SRD5A3 (ENSMMUG00000010113) #16	TMEM165 (ENSMMUG00000001918) #17	CLOCK (ENSMMUG00000001919) #18	PDCL2 (ENSMMUG00000006271) #19	NMU (ENSMMUG00000043692)	EXOC1L (ENSMMUG00000039297) #21	EXOC1 (ENSMMUG00000023427) #22	CEP135 (ENSMMUG00000009925)	CRACD (ENSMMUG00000016358)	AASDH (ENSMMUG00000016360)	ENSMMUG00000055013	PPAT (ENSMMUG00000016362)	PAICS (ENSMMUG00000016366)	SRP72 (ENSMMUG00000016368)	ARL9 (ENSMMUG00000052194)	THEGL (ENSMMUG00000041612)	ENSMMUG00000060244	HOPX (ENSMMUG00000017788)	ENSMMUG00000061562	SPINK2 (ENSMMUG00000053539)	ENSMMUG00000060599	REST (ENSMMUG00000018821)
Crab-eating macaque	MODERN SPECIES	15	ENSMFAG00000062722	ENSMFAG00000058181	CHIC2 (ENSMFAG00000035340) #10	ENSMFAG00000054734	GSX2 (ENSMFAG00000038491) #11	PDGFRA (ENSMFAG00000046187) #12	KIT (ENSMFAG00000041033) #14	KDR (ENSMFAG00000043201) #15	ENSMFAG00000059515	ENSMFAG00000064599	TMEM165 (ENSMFAG00000034541) #17	CLOCK (ENSMFAG00000043377) #18	PDCL2 (ENSMFAG00000001261) #19	NMU (ENSMFAG00000040660)	EXOC1L (ENSMFAG00000056471) #21	EXOC1 (ENSMFAG00000040087) #22	CEP135 (ENSMFAG00000032993)	CRACD (ENSMFAG00000001807)	AASDH (ENSMFAG00000033449)	PPAT (ENSMFAG00000041933)	PAICS (ENSMFAG00000033255)	ENSMFAG00000064316	SRP72 (ENSMFAG00000031065)	ARL9 (ENSMFAG00000039451)	THEGL (ENSMFAG00000041767)	ENSMFAG00000048360	HOPX (ENSMFAG00000006576)	ENSMFAG00000042202	REST (ENSMFAG00000038786)	NOA1 (ENSMFAG00000035534)	POLR2B (ENSMFAG00000042250)
Pig-tailed macaque	MODERN SPECIES	306	RBM46 (ENSMNEG00000002787)	CHIC2 (ENSMNEG00000028920) #10	ENSMNEG00000034287	GSX2 (ENSMNEG00000036971) #11	ENSMNEG00000042355	PDGFRA (ENSMNEG00000034868) #12	KIT (ENSMNEG00000033149) #14	KDR (ENSMNEG00000042884) #15	SRD5A3 (ENSMNEG00000031682) #16	TMEM165 (ENSMNEG00000029130) #17	CLOCK (ENSMNEG00000031474) #18	PDCL2 (ENSMNEG00000036647) #19	NMU (ENSMNEG00000036198)	ENSMNEG00000043005	EXOC1L (ENSMNEG00000036784) #21	EXOC1 (ENSMNEG00000030837) #22	CEP135 (ENSMNEG00000032627)	ENSMNEG00000029915	CRACD (ENSMNEG00000037712)	AASDH (ENSMNEG00000041209)	PPAT (ENSMNEG00000040243)	PAICS (ENSMNEG00000044037)	ENSMNEG00000038065	ARL9 (ENSMNEG00000042244)	THEGL (ENSMNEG00000029009)	HOPX (ENSMNEG00000037886)	SPINK2 (ENSMNEG00000034333)	REST (ENSMNEG00000040064)	NOA1 (ENSMNEG00000033975)	POLR2B (ENSMNEG00000041844)	IGFBP7 (ENSMNEG00000045498)
Vervet Monkey	MODERN SPECIES	26	RASL11B (ENSCSAG00000004968)	SCFD2 (ENSCSAG00000004970) #7	ENSCSAG00000004975	LNX1 (ENSCSAG00000004979) #9	GSX2 (ENSCSAG00000004981) #11	PDGFRA (ENSCSAG00000004987) #12	KIT (ENSCSAG00000004992) #14	ENSCSAG00000004997	KDR (ENSCSAG00000005005) #15	SRD5A3 (ENSCSAG00000005010) #16	TMEM165 (ENSCSAG00000005013) #17	CLOCK (ENSCSAG00000005019) #18	PDCL2 (ENSCSAG00000005023) #19	ENSCSAG00000000424	NMU (ENSCSAG00000005030)	EXOC1 (ENSCSAG00000005038) #22	CEP135 (ENSCSAG00000005042)	CRACD (ENSCSAG00000005049)	ENSCSAG00000005053	AASDH (ENSCSAG00000005057)	ENSCSAG00000000425	PPAT (ENSCSAG00000005060)	SRP72 (ENSCSAG00000005079)	ARL9 (ENSCSAG00000005100)	THEGL (ENSCSAG00000005107)	HOPX (ENSCSAG00000005112)	ENSCSAG00000005117	REST (ENSCSAG00000005119)	POLR2B (ENSCSAG00000005130)	ENSCSAG00000000426	IGFBP7 (ENSCSAG00000005138)
Rhinopithecus	ANCESTRAL SPECIES	693												ENSGT00860000135407.B.c.b	ENSGT00940000154433.a.a	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22
Black snub-nosed monkey	MODERN SPECIES	507					ENSRBIG00000034492	NCAM2 (ENSRBIG00000031975)	ENSRBIG00000007193	KDR (ENSRBIG00000012786) #15	SRD5A3 (ENSRBIG00000032854) #16	TMEM165 (ENSRBIG00000035652) #17	CLOCK (ENSRBIG00000041151) #18	PDCL2 (ENSRBIG00000042204) #19	NMU (ENSRBIG00000000139)	ENSRBIG00000025802	EXOC1L (ENSRBIG00000027915) #21	EXOC1 (ENSRBIG00000041634) #22	ST3GAL1 (ENSRBIG00000031292)	NDRG1 (ENSRBIG00000044999)	CCN4 (ENSRBIG00000038011)	TG (ENSRBIG00000034977)	SLA (ENSRBIG00000027623)	PHF20L1 (ENSRBIG00000043926)	TMEM71 (ENSRBIG00000034797)	DNAAF11 (ENSRBIG00000026530)	KCNQ3 (ENSRBIG00000044246)	HHLA1 (ENSRBIG00000044974)	OC90 (ENSRBIG00000028259)	EFR3A (ENSRBIG00000042188)
Golden snub-nosed monkey	MODERN SPECIES	3305																EXOC1 (ENSRROG00000043350) #22
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00940000154326.a.a.h.a.a	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00940000157668.f	ENSGT00530000063555.A.a.a
Cebidae	ANCESTRAL SPECIES	4	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00940000154326.a.a.h.a.a	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00940000157668.f	ENSGT00530000063555.A.a.a
Marmoset	MODERN SPECIES	15	ENSCJAG00000083456	CHIC2 (ENSCJAG00000041961) #10	GSX2 (ENSCJAG00000018454) #11	ENSCJAG00000068751	ENSCJAG00000086980	PDGFRA (ENSCJAG00000018415) #12	KIT (ENSCJAG00000018396) #14	KDR (ENSCJAG00000018352) #15	SRD5A3 (ENSCJAG00000052753) #16	TMEM165 (ENSCJAG00000046061) #17	CLOCK (ENSCJAG00000018261) #18	PDCL2 (ENSCJAG00000018258) #19	ENSCJAG00000075161	NMU (ENSCJAG00000018237)	EXOC1L (ENSCJAG00000085497) #21	EXOC1 (ENSCJAG00000018175) #22	ENSCJAG00000072934	CEP135 (ENSCJAG00000018119)	CRACD (ENSCJAG00000018115)	AASDH (ENSCJAG00000018076)	PPAT (ENSCJAG00000039960)	PAICS (ENSCJAG00000018022)	ENSCJAG00000017998	ARL9 (ENSCJAG00000020536)	THEGL (ENSCJAG00000039615)	ENSCJAG00000045806	ENSCJAG00000085494	REST (ENSCJAG00000004081)	NOA1 (ENSCJAG00000004102)	POLR2B (ENSCJAG00000004118)	IGFBP7 (ENSCJAG00000042323)
Cebidae_a	ANCESTRAL SPECIES	63	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00940000154326.a.a.h.a.a	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00930000151314.h	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00940000157668.f	ENSGT00530000063555.A.a.a
Capuchin	MODERN SPECIES	124	GSX2 (ENSCCAG00000023920) #11	ENSCCAG00000022442	PDGFRA (ENSCCAG00000023887) #12	ENSCCAG00000012432	KIT (ENSCCAG00000033583) #14	KDR (ENSCCAG00000027345) #15	ENSCCAG00000012342	SRD5A3 (ENSCCAG00000037850) #16	ENSCCAG00000012793	TMEM165 (ENSCCAG00000031593) #17	CLOCK (ENSCCAG00000031941) #18	PDCL2 (ENSCCAG00000021001) #19	NMU (ENSCCAG00000033866)	ENSCCAG00000019432	EXOC1L (ENSCCAG00000029016) #21	EXOC1 (ENSCCAG00000023309) #22	CEP135 (ENSCCAG00000035439)
Bolivian squirrel monkey	MODERN SPECIES	99	LNX1 (ENSSBOG00000034544) #9	ENSSBOG00000010731	CHIC2 (ENSSBOG00000015084) #10	GSX2 (ENSSBOG00000035576) #11	PDGFRA (ENSSBOG00000022806) #12	ENSSBOG00000024307	KIT (ENSSBOG00000031748) #14	KDR (ENSSBOG00000025028) #15	SRD5A3 (ENSSBOG00000026663) #16	TMEM165 (ENSSBOG00000025423) #17	CLOCK (ENSSBOG00000030594) #18	PDCL2 (ENSSBOG00000027890) #19	NMU (ENSSBOG00000028898)	ENSSBOG00000017845	EXOC1L (ENSSBOG00000023113) #21	EXOC1 (ENSSBOG00000034813) #22	CEP135 (ENSSBOG00000023582)	CRACD (ENSSBOG00000034674)	AASDH (ENSSBOG00000029836)	ENSSBOG00000017998	PAICS (ENSSBOG00000024834)	ENSSBOG00000032586	ENSSBOG00000031860	ARL9 (ENSSBOG00000032014)	THEGL (ENSSBOG00000023585)	HOPX (ENSSBOG00000017553)	ENSSBOG00000023352	ENSSBOG00000032589	ENSSBOG00000026443	REST (ENSSBOG00000032119)	NOA1 (ENSSBOG00000022956)
Mas night monkey	MODERN SPECIES	469	LNX1 (ENSANAG00000028251) #9	ENSANAG00000037095	CHIC2 (ENSANAG00000028323) #10	GSX2 (ENSANAG00000019366) #11	PDGFRA (ENSANAG00000023924) #12	ENSANAG00000033625	KIT (ENSANAG00000030367) #14	ENSANAG00000038115	KDR (ENSANAG00000032646) #15	SRD5A3 (ENSANAG00000035851) #16	TMEM165 (ENSANAG00000021886) #17	CLOCK (ENSANAG00000023882) #18	PDCL2 (ENSANAG00000020418) #19	NMU (ENSANAG00000031034)	EXOC1L (ENSANAG00000037409) #21	EXOC1 (ENSANAG00000020021) #22	CEP135 (ENSANAG00000037147)	CRACD (ENSANAG00000021913)	AASDH (ENSANAG00000035915)	PPAT (ENSANAG00000031138)	PAICS (ENSANAG00000024043)	SRP72 (ENSANAG00000020836)	ENSANAG00000033375	THEGL (ENSANAG00000038152)	HOPX (ENSANAG00000024338)	ENSANAG00000037532	ENSANAG00000033101	ENSANAG00000029889	REST (ENSANAG00000037422)	NOA1 (ENSANAG00000026721)	ENSANAG00000021511
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000175494	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00960000187690	ENSGT00940000165267	ENSGT00440000033811	ENSGT00390000003428	ENSGT00940000164461	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695
Tree shrew	MODERN SPECIES	4298															EXOC1L (ENSTBEG00000008630) #21	EXOC1 (ENSTBEG00000008677) #22
Glires	ANCESTRAL SPECIES	8	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000175494	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00960000187690	ENSGT00940000165267	ENSGT00440000033811	ENSGT00390000003428	ENSGT00940000164461	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695
Lagomorpha	ANCESTRAL SPECIES	106								ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00940000155527	ENSGT00950000182886.a.b	ENSGT00940000156266
Rabbit	MODERN SPECIES	6	MYOZ2 (ENSOCUG00000008959)	SYNPO2 (ENSOCUG00000008953)	SEC24D (ENSOCUG00000013272)	METTL14 (ENSOCUG00000003062)	KIT (ENSOCUG00000007086) #14	KDR (ENSOCUG00000005062) #15	ENSOCUG00000031079	ENSOCUG00000028005 #16	TMEM165 (ENSOCUG00000013475) #17	ENSOCUG00000033450	CLOCK (ENSOCUG00000022350) #18	PDCL2 (ENSOCUG00000007651) #19	NMU (ENSOCUG00000017128)	ENSOCUG00000035473	EXOC1L (ENSOCUG00000035186) #21	EXOC1 (ENSOCUG00000017917) #22	CEP135 (ENSOCUG00000017919)	CRACD (ENSOCUG00000012185)	AASDH (ENSOCUG00000012192)	ENSOCUG00000036591	PPAT (ENSOCUG00000012201)	PAICS (ENSOCUG00000012216)	SRP72 (ENSOCUG00000012226)	ENSOCUG00000021344	THEGL (ENSOCUG00000033811)	HOPX (ENSOCUG00000005107)	REST (ENSOCUG00000001776)	NOA1 (ENSOCUG00000016330)	POLR2B (ENSOCUG00000016353)	ENSOCUG00000036880	ENSOCUG00000036939
Pika	MODERN SPECIES	5132																EXOC1 (ENSOPRG00000008695) #22	CEP135 (ENSOPRG00000008720)
Rodentia	ANCESTRAL SPECIES	13	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00960000187690	ENSGT00940000165267	ENSGT00440000033811	ENSGT00390000003428	ENSGT00940000164461	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695
Rodentia_B	ANCESTRAL SPECIES	19	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00960000187690	ENSGT00940000165267	ENSGT00940000169459	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695
Kangaroo rat	MODERN SPECIES	327	Usp46 (ENSDORG00000005800)	Rasl11b (ENSDORG00000030008)	Scfd2 (ENSDORG00000005627) #7	ENSDORG00000005629	Lnx1 (ENSDORG00000005635) #9	Chic2 (ENSDORG00000027994) #10	Gsx2 (ENSDORG00000000416) #11	Pdgfra (ENSDORG00000002763) #12	Kit (ENSDORG00000007317) #14	Kdr (ENSDORG00000006837) #15	Srd5a3 (ENSDORG00000008012) #16	Tmem165 (ENSDORG00000008013) #17	Clock (ENSDORG00000008014) #18	Pdcl2 (ENSDORG00000009617) #19	Exoc1l (ENSDORG00000023656) #21	Exoc1 (ENSDORG00000012170) #22	ENSDORG00000026235	Cep135 (ENSDORG00000001804)	ENSDORG00000000162	ENSDORG00000027747	ENSDORG00000025512	ENSDORG00000028255	Ppat (ENSDORG00000000166)	Paics (ENSDORG00000000167)	Srp72 (ENSDORG00000000171)	Arl9 (ENSDORG00000012801)	ENSDORG00000024918	ENSDORG00000027961	ENSDORG00000029054	ENSDORG00000029342	Polr2b (ENSDORG00000010077)
Myomorpha	ANCESTRAL SPECIES	19	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000165267	ENSGT00940000169459	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C
Muroidea	ANCESTRAL SPECIES	17	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00940000155527
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00940000155527
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172.f	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00940000155527
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172.f	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00940000155527
Northern American deer mouse	MODERN SPECIES	1	ENSPEMG00000026634	Fip1l1 (ENSPEMG00000002025)	Lnx1 (ENSPEMG00000001631) #9	Chic2 (ENSPEMG00000016307) #10	Gsx2 (ENSPEMG00000008341) #11	Pdgfra (ENSPEMG00000007844) #12	ENSPEMG00000025221	Kit (ENSPEMG00000011261) #14	Kdr (ENSPEMG00000018642) #15	Srd5a3 (ENSPEMG00000010609) #16	Tmem165 (ENSPEMG00000009507) #17	Clock (ENSPEMG00000014058) #18	Pdcl2 (ENSPEMG00000011759) #19	Nmu (ENSPEMG00000014701)	Exoc1l (ENSPEMG00000015388) #21	Exoc1 (ENSPEMG00000014937) #22	Cep135 (ENSPEMG00000012282)	Cracd (ENSPEMG00000010216)	Aasdh (ENSPEMG00000011196)	Ppat (ENSPEMG00000016464)	ENSPEMG00000001745	Srp72 (ENSPEMG00000012828)	Arl9 (ENSPEMG00000005278)	Thegl (ENSPEMG00000001037)	Hopx (ENSPEMG00000029207)	Spink2 (ENSPEMG00000020830)	ENSPEMG00000020669	Noa1 (ENSPEMG00000020457)	Polr2b (ENSPEMG00000021804)	Igfbp7 (ENSPEMG00000022355)	Adgrl3 (ENSPEMG00000005785)
Prairie vole	MODERN SPECIES	349	Rasl11b (ENSMOCG00000022471)	Scfd2 (ENSMOCG00000015774) #7	Fip1l1 (ENSMOCG00000008020)	Lnx1 (ENSMOCG00000015978) #9	Chic2 (ENSMOCG00000000811) #10	Gsx2 (ENSMOCG00000010227) #11	Pdgfra (ENSMOCG00000012103) #12	Kit (ENSMOCG00000007652) #14	Kdr (ENSMOCG00000017085) #15	Srd5a3 (ENSMOCG00000006257) #16	Tmem165 (ENSMOCG00000013834) #17	Clock (ENSMOCG00000000757) #18	Pdcl2 (ENSMOCG00000014108) #19	Nmu (ENSMOCG00000002680)	Exoc1l (ENSMOCG00000002325) #21	Exoc1 (ENSMOCG00000019131) #22	Cep135 (ENSMOCG00000022436)	ENSMOCG00000016902	ENSMOCG00000000709	ENSMOCG00000016218	ENSMOCG00000017325	ENSMOCG00000022620	ENSMOCG00000007056	ENSMOCG00000019958	Srp72 (ENSMOCG00000020309)	Arl9 (ENSMOCG00000013375)	Thegl (ENSMOCG00000014946)	Hopx (ENSMOCG00000018478)	Spink2 (ENSMOCG00000021192)	ENSMOCG00000022889	Noa1 (ENSMOCG00000005010)
Cricetinae	ANCESTRAL SPECIES	9	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172.f	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00940000155527
Chinese hamster chok1gshd	MODERN SPECIES	44	Lnx1 (ENSCGRG00001011729) #9	Chic2 (ENSCGRG00001024567) #10	Gsx2 (ENSCGRG00001002346) #11	ENSCGRG00001012414	Pdgfra (ENSCGRG00001015525) #12	ENSCGRG00001010956	Kit (ENSCGRG00001013653) #14	ENSCGRG00001009055	Kdr (ENSCGRG00001019345) #15	Srd5a3 (ENSCGRG00001002000) #16	Tmem165 (ENSCGRG00001016385) #17	Clock (ENSCGRG00001012746) #18	Pdcl2 (ENSCGRG00001016710) #19	Nmu (ENSCGRG00001012189)	Exoc1l (ENSCGRG00001015240) #21	Exoc1 (ENSCGRG00001019607) #22	Cep135 (ENSCGRG00001020803)	ENSCGRG00001021318	Cracd (ENSCGRG00001023592)	Aasdh (ENSCGRG00001017656)	Ppat (ENSCGRG00001020260)	ENSCGRG00001022669	Srp72 (ENSCGRG00001013548)	Arl9 (ENSCGRG00001025054)	Thegl (ENSCGRG00001000567)	Hopx (ENSCGRG00001009595)	Spink2 (ENSCGRG00001000790)	ENSCGRG00001014440	Noa1 (ENSCGRG00001019606)	Polr2b (ENSCGRG00001021842)	Igfbp7 (ENSCGRG00001019536)
Golden Hamster	MODERN SPECIES	720	Rasl11b (ENSMAUG00000003048)	Scfd2 (ENSMAUG00000011399) #7	Fip1l1 (ENSMAUG00000010526)	Lnx1 (ENSMAUG00000021129) #9	Chic2 (ENSMAUG00000012879) #10	Gsx2 (ENSMAUG00000022163) #11	Pdgfra (ENSMAUG00000018986) #12	ENSMAUG00000013726 #14	Kdr (ENSMAUG00000016126) #15	Srd5a3 (ENSMAUG00000003018) #16	Tmem165 (ENSMAUG00000019967) #17	Clock (ENSMAUG00000012196) #18	Pdcl2 (ENSMAUG00000016445) #19	Nmu (ENSMAUG00000004029)	Exoc1l (ENSMAUG00000008650) #21	Exoc1 (ENSMAUG00000000845) #22	Cep135 (ENSMAUG00000011590)	Cracd (ENSMAUG00000021186)	Aasdh (ENSMAUG00000009600)	Ppat (ENSMAUG00000018321)	Paics (ENSMAUG00000017200)	Srp72 (ENSMAUG00000001237)	Arl9 (ENSMAUG00000014055)	Thegl (ENSMAUG00000009973)	Hopx (ENSMAUG00000000923)	Spink2 (ENSMAUG00000019778)	Noa1 (ENSMAUG00000014203)	Polr2b (ENSMAUG00000017655)	Igfbp7 (ENSMAUG00000008896)
Murinae	ANCESTRAL SPECIES	12	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00940000155527
Mus	ANCESTRAL SPECIES	14	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00940000155527
Mus_A	ANCESTRAL SPECIES	6	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00940000155527
Mus_B	ANCESTRAL SPECIES	4	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00940000155527
Mus_C	ANCESTRAL SPECIES	4	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00940000155527
spretus	MODERN SPECIES	14	Usp46 (MGP_SPRETEiJ_G0028296)	Rasl11b (MGP_SPRETEiJ_G0028297)	Scfd2 (MGP_SPRETEiJ_G0028298) #7	Fip1l1 (MGP_SPRETEiJ_G0028299)	Lnx1 (MGP_SPRETEiJ_G0028300) #9	Chic2 (MGP_SPRETEiJ_G0028301) #10	Gsx2 (MGP_SPRETEiJ_G0028302) #11	Pdgfra (MGP_SPRETEiJ_G0028303) #12	Kit (MGP_SPRETEiJ_G0028304) #14	Kdr (MGP_SPRETEiJ_G0028305) #15	Srd5a3 (MGP_SPRETEiJ_G0028306) #16	Tmem165 (MGP_SPRETEiJ_G0028307) #17	Clock (MGP_SPRETEiJ_G0028308) #18	Pdcl2 (MGP_SPRETEiJ_G0028309) #19	Nmu (MGP_SPRETEiJ_G0028310)	Exoc1 (MGP_SPRETEiJ_G0028311) #22	Cep135 (MGP_SPRETEiJ_G0028312)	Cracd (MGP_SPRETEiJ_G0028313)	MGP_SPRETEiJ_G0028314	Ppat (MGP_SPRETEiJ_G0028315)	MGP_SPRETEiJ_G0028316	Srp72 (MGP_SPRETEiJ_G0028317)	Arl9 (MGP_SPRETEiJ_G0028318)	Thegl (MGP_SPRETEiJ_G0028319)	Hopx (MGP_SPRETEiJ_G0028320)	Spink2 (MGP_SPRETEiJ_G0028321)	Rest (MGP_SPRETEiJ_G0028322)	Noa1 (MGP_SPRETEiJ_G0028323)	Polr2b (MGP_SPRETEiJ_G0028324)	Igfbp7 (MGP_SPRETEiJ_G0028325)	Adgrl3 (MGP_SPRETEiJ_G0028326)
Steppe mouse	MODERN SPECIES	3186					Pdgfra (ENSMSIG00000019363) #12	Kit (ENSMSIG00000019425) #14	Kdr (ENSMSIG00000019455) #15	Srd5a3 (ENSMSIG00000019532) #16	Tmem165 (ENSMSIG00000019563) #17	Clock (ENSMSIG00000019589) #18	ENSMSIG00000019701	Pdcl2 (ENSMSIG00000019711) #19	Nmu (ENSMSIG00000019724)	ENSMSIG00000019748	Exoc1l (ENSMSIG00000019754) #21	Exoc1 (ENSMSIG00000019769) #22	Cep135 (ENSMSIG00000019858)	ENSMSIG00000019982	Aasdh (ENSMSIG00000020041)	Ppat (ENSMSIG00000020090)	ENSMSIG00000020115	Srp72 (ENSMSIG00000020197)	ENSMSIG00000020321	Thegl (ENSMSIG00000020348)	ENSMSIG00000020378	ENSMSIG00000020387	ENSMSIG00000020403	Rest (ENSMSIG00000020420)	Noa1 (ENSMSIG00000020440)	Polr2b (ENSMSIG00000020476)	ENSMSIG00000020525
Mouse	MODERN SPECIES	14	Rasl11b (ENSMUSG00000049907)	Scfd2 (ENSMUSG00000062110) #7	Fip1l1 (ENSMUSG00000029227)	Lnx1 (ENSMUSG00000029228) #9	Chic2 (ENSMUSG00000029229) #10	Gsx2 (ENSMUSG00000035946) #11	Pdgfra (ENSMUSG00000029231) #12	Kit (ENSMUSG00000005672) #14	Kdr (ENSMUSG00000062960) #15	Srd5a3 (ENSMUSG00000029233) #16	Tmem165 (ENSMUSG00000029234) #17	Clock (ENSMUSG00000029238) #18	Pdcl2 (ENSMUSG00000029235) #19	Nmu (ENSMUSG00000029236)	Exoc1l (ENSMUSG00000091204) #21	Exoc1 (ENSMUSG00000036435) #22	Cep135 (ENSMUSG00000036403)	Cracd (ENSMUSG00000036377)	Aasdh (ENSMUSG00000055923)	Ppat (ENSMUSG00000029246)	Paics (ENSMUSG00000029247)	Srp72 (ENSMUSG00000036323)	Arl9 (ENSMUSG00000063820)	Thegl (ENSMUSG00000029248)	Hopx (ENSMUSG00000059325)	Spink2 (ENSMUSG00000053030)	Rest (ENSMUSG00000029249)	Noa1 (ENSMUSG00000036285)	Polr2b (ENSMUSG00000029250)	Igfbp7 (ENSMUSG00000036256)	Adgrl3 (ENSMUSG00000037605)
Ryukyu mouse	MODERN SPECIES	14	Rasl11b (MGP_CAROLIEiJ_G0027302)	Scfd2 (MGP_CAROLIEiJ_G0027303) #7	Fip1l1 (MGP_CAROLIEiJ_G0027304)	Lnx1 (MGP_CAROLIEiJ_G0027305) #9	Chic2 (MGP_CAROLIEiJ_G0027306) #10	Gsx2 (MGP_CAROLIEiJ_G0027307) #11	Bicdl1 (MGP_CAROLIEiJ_G0027308)	Pdgfra (MGP_CAROLIEiJ_G0027309) #12	Kit (MGP_CAROLIEiJ_G0027310) #14	Kdr (MGP_CAROLIEiJ_G0027311) #15	Srd5a3 (MGP_CAROLIEiJ_G0027312) #16	Tmem165 (MGP_CAROLIEiJ_G0027313) #17	Clock (MGP_CAROLIEiJ_G0027314) #18	Pdcl2 (MGP_CAROLIEiJ_G0027315) #19	Nmu (MGP_CAROLIEiJ_G0027316)	Exoc1 (MGP_CAROLIEiJ_G0027317) #22	Cep135 (MGP_CAROLIEiJ_G0027318)	Cracd (MGP_CAROLIEiJ_G0027319)	Aasdh (MGP_CAROLIEiJ_G0027320)	Ppat (MGP_CAROLIEiJ_G0027321)	Paics (MGP_CAROLIEiJ_G0027322)	Srp72 (MGP_CAROLIEiJ_G0027323)	Arl9 (MGP_CAROLIEiJ_G0027324)	Thegl (MGP_CAROLIEiJ_G0027325)	Hopx (MGP_CAROLIEiJ_G0027326)	Spink2 (MGP_CAROLIEiJ_G0027327)	Noa1 (MGP_CAROLIEiJ_G0027328)	Polr2b (MGP_CAROLIEiJ_G0027329)	Igfbp7 (MGP_CAROLIEiJ_G0027330)	MGP_CAROLIEiJ_G0027331	Adgrl3 (MGP_CAROLIEiJ_G0027333)
Shrew mouse	MODERN SPECIES	4	Usp46 (MGP_PahariEiJ_G0017082)	Rasl11b (MGP_PahariEiJ_G0017083)	Scfd2 (MGP_PahariEiJ_G0017084) #7	Fip1l1 (MGP_PahariEiJ_G0017085)	Lnx1 (MGP_PahariEiJ_G0017086) #9	Chic2 (MGP_PahariEiJ_G0017087) #10	Gsx2 (MGP_PahariEiJ_G0017088) #11	Pdgfra (MGP_PahariEiJ_G0017089) #12	Kit (MGP_PahariEiJ_G0017090) #14	Kdr (MGP_PahariEiJ_G0017091) #15	Srd5a3 (MGP_PahariEiJ_G0017092) #16	Tmem165 (MGP_PahariEiJ_G0017093) #17	Clock (MGP_PahariEiJ_G0017094) #18	Pdcl2 (MGP_PahariEiJ_G0017095) #19	Nmu (MGP_PahariEiJ_G0017096)	Exoc1 (MGP_PahariEiJ_G0017097) #22	Cep135 (MGP_PahariEiJ_G0017098)	MGP_PahariEiJ_G0017099	Aasdh (MGP_PahariEiJ_G0017100)	Ppat (MGP_PahariEiJ_G0017101)	Paics (MGP_PahariEiJ_G0017102)	Srp72 (MGP_PahariEiJ_G0017103)	Arl9 (MGP_PahariEiJ_G0017104)	Thegl (MGP_PahariEiJ_G0017105)	Hopx (MGP_PahariEiJ_G0017106)	Spink2 (MGP_PahariEiJ_G0017107)	Rest (MGP_PahariEiJ_G0017108)	Noa1 (MGP_PahariEiJ_G0017109)	Polr2b (MGP_PahariEiJ_G0017110)	Igfbp7 (MGP_PahariEiJ_G0017111)	Adgrl3 (MGP_PahariEiJ_G0017112)
Rat	MODERN SPECIES	5	Scfd2 (ENSRNOG00000026828) #7	Fip1l1 (ENSRNOG00000002275)	Lnx1 (ENSRNOG00000002272) #9	Chic2 (ENSRNOG00000002267) #10	Gsx2 (ENSRNOG00000002266) #11	Pdgfra (ENSRNOG00000002244) #12	ENSRNOG00000063288	Kit (ENSRNOG00000002227) #14	Kdr (ENSRNOG00000046829) #15	Srd5a3 (ENSRNOG00000002216) #16	Tmem165 (ENSRNOG00000002199) #17	Clock (ENSRNOG00000002175) #18	Pdcl2 (ENSRNOG00000002169) #19	Nmu (ENSRNOG00000002164)	Exoc1l (ENSRNOG00000050100) #21	Exoc1 (ENSRNOG00000002144) #22	Cep135 (ENSRNOG00000002153)	Cracd (ENSRNOG00000002139)	Aasdh (ENSRNOG00000002137)	Ppat (ENSRNOG00000002128)	Paics (ENSRNOG00000002101)	LOC108348180 (ENSRNOG00000002100)	Arl9 (ENSRNOG00000029628)	Thegl (ENSRNOG00000002085)	Hopx (ENSRNOG00000024689)	Spink2 (ENSRNOG00000066503)	Rest (ENSRNOG00000002074)	Noa1 (ENSRNOG00000002055)	Polr2b (ENSRNOG00000024779)	Igfbp7 (ENSRNOG00000002050)	RGD1561589 (ENSRNOG00000024829)
Upper Galilee mountains blind mole rat	MODERN SPECIES	842		ENSNGAG00000021379 #7	Fip1l1 (ENSNGAG00000008849)	Lnx1 (ENSNGAG00000002832) #9	Chic2 (ENSNGAG00000016892) #10	Gsx2 (ENSNGAG00000008405) #11	Pdgfra (ENSNGAG00000009344) #12	Kit (ENSNGAG00000015645) #14	Kdr (ENSNGAG00000002982) #15	Srd5a3 (ENSNGAG00000013026) #16	Tmem165 (ENSNGAG00000012244) #17	Clock (ENSNGAG00000017297) #18	Pdcl2 (ENSNGAG00000012358) #19	Nmu (ENSNGAG00000020747)	Exoc1l (ENSNGAG00000020410) #21	Exoc1 (ENSNGAG00000000680) #22	Cep135 (ENSNGAG00000024071)	ENSNGAG00000022872	ENSNGAG00000022499	ENSNGAG00000011459	Ppat (ENSNGAG00000003683)	Paics (ENSNGAG00000014177)	Srp72 (ENSNGAG00000012595)	Arl9 (ENSNGAG00000008945)	Thegl (ENSNGAG00000019380)	Hopx (ENSNGAG00000005421)	Spink2 (ENSNGAG00000012319)	ENSNGAG00000010453	Noa1 (ENSNGAG00000017239)	Polr2b (ENSNGAG00000014884)	Igfbp7 (ENSNGAG00000001863)
Rodentia_A	ANCESTRAL SPECIES	20	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT01030000238073	ENSGT00940000165267	ENSGT00440000033811	ENSGT00390000003428	ENSGT00940000164461	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695
Hystricomorpha	ANCESTRAL SPECIES	26	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT01030000238073	ENSGT00940000165267	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00940000167102	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695
Hystricomorpha_a	ANCESTRAL SPECIES	23	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT01030000238073	ENSGT00940000165267	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00940000167102	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Hystricomorpha_b	ANCESTRAL SPECIES	76	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000165267	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00940000155527	ENSGT00950000182886.a.b
Degu	MODERN SPECIES	60	ENSODEG00000009055	ENSODEG00000019624	CHIC2 (ENSODEG00000009727) #10	GSX2 (ENSODEG00000009015) #11	PDGFRA (ENSODEG00000009544) #12	ENSODEG00000011811	KIT (ENSODEG00000012738) #14	KDR (ENSODEG00000009430) #15	ENSODEG00000012100	SRD5A3 (ENSODEG00000009796) #16	TMEM165 (ENSODEG00000009162) #17	CLOCK (ENSODEG00000009397) #18	PDCL2 (ENSODEG00000009736) #19	NMU (ENSODEG00000010066)	EXOC1L (ENSODEG00000011413) #21	EXOC1 (ENSODEG00000010280) #22	CEP135 (ENSODEG00000010808)	ENSODEG00000010954	AASDH (ENSODEG00000011546)	PPAT (ENSODEG00000009426)	ENSODEG00000009422	SRP72 (ENSODEG00000012214)	ENSODEG00000010449	ENSODEG00000009952	ENSODEG00000010470	HOPX (ENSODEG00000010206)	ENSODEG00000010672	ENSODEG00000010775	ENSODEG00000009707	ENSODEG00000009942	ENSODEG00000010125
Long-tailed chinchilla	MODERN SPECIES	154	USP46 (ENSCLAG00000006241)	RASL11B (ENSCLAG00000005450)	SCFD2 (ENSCLAG00000006610) #7	ENSCLAG00000003675	LNX1 (ENSCLAG00000005760) #9	CHIC2 (ENSCLAG00000005438) #10	PDGFRA (ENSCLAG00000005250) #12	KIT (ENSCLAG00000006440) #14	KDR (ENSCLAG00000010052) #15	SRD5A3 (ENSCLAG00000014169) #16	TMEM165 (ENSCLAG00000005359) #17	CLOCK (ENSCLAG00000004837) #18	PDCL2 (ENSCLAG00000004036) #19	NMU (ENSCLAG00000003714)	EXOC1L (ENSCLAG00000003403) #21	EXOC1 (ENSCLAG00000011547) #22	CEP135 (ENSCLAG00000003843)	ENSCLAG00000006063	ENSCLAG00000005580	AASDH (ENSCLAG00000005208)	ENSCLAG00000004994	PPAT (ENSCLAG00000004229)	PAICS (ENSCLAG00000005063)	SRP72 (ENSCLAG00000003571)	ENSCLAG00000003219	ENSCLAG00000003121	ENSCLAG00000005736	ENSCLAG00000017609	ENSCLAG00000004630	NOA1 (ENSCLAG00000008077)	POLR2B (ENSCLAG00000005440)
Guinea pig	MODERN SPECIES	24	RASL11B (ENSCPOG00000010760)	SCFD2 (ENSCPOG00000039431) #7	ENSCPOG00000010770	LNX1 (ENSCPOG00000010775) #9	CHIC2 (ENSCPOG00000040036) #10	GSX2 (ENSCPOG00000005837) #11	PDGFRA (ENSCPOG00000011782) #12	KIT (ENSCPOG00000011411) #14	KDR (ENSCPOG00000010001) #15	SRD5A3 (ENSCPOG00000011801) #16	TMEM165 (ENSCPOG00000011803) #17	CLOCK (ENSCPOG00000011807) #18	PDCL2 (ENSCPOG00000036525) #19	NMU (ENSCPOG00000009016)	EXOC1L (ENSCPOG00000040720) #21	EXOC1 (ENSCPOG00000003208) #22	CEP135 (ENSCPOG00000003212)	ENSCPOG00000000214	ENSCPOG00000040605	AASDH (ENSCPOG00000000215)	PPAT (ENSCPOG00000000216)	ENSCPOG00000010749	SRP72 (ENSCPOG00000000218)	ENSCPOG00000000220	THEGL (ENSCPOG00000030344)	HOPX (ENSCPOG00000032872)	ENSCPOG00000038446	ENSCPOG00000014066	NOA1 (ENSCPOG00000031454)	POLR2B (ENSCPOG00000013006)	IGFBP7 (ENSCPOG00000024650)
Naked mole-rat female	MODERN SPECIES	1	FIP1L1 (ENSHGLG00000018937)	LNX1 (ENSHGLG00000017095) #9	ENSHGLG00000037646	CHIC2 (ENSHGLG00000016294) #10	GSX2 (ENSHGLG00000016176) #11	PDGFRA (ENSHGLG00000007320) #12	KIT (ENSHGLG00000006129) #14	KDR (ENSHGLG00000011062) #15	SRD5A3 (ENSHGLG00000006595) #16	TMEM165 (ENSHGLG00000018297) #17	ENSHGLG00000017032	CLOCK (ENSHGLG00000016989) #18	PDCL2 (ENSHGLG00000008374) #19	NMU (ENSHGLG00000006706)	EXOC1L (ENSHGLG00000018199) #21	EXOC1 (ENSHGLG00000016475) #22	CEP135 (ENSHGLG00000015882)	ENSHGLG00000044551	CRACD (ENSHGLG00000016718)	AASDH (ENSHGLG00000015134)	PPAT (ENSHGLG00000015015)	PAICS (ENSHGLG00000016700)	SRP72 (ENSHGLG00000009791)	ARL9 (ENSHGLG00000046973)	ENSHGLG00000041011	ENSHGLG00000008232	ENSHGLG00000042197	ENSHGLG00000004295	ENSHGLG00000036836	ENSHGLG00000005916	NOA1 (ENSHGLG00000006204)
Sciuridae	ANCESTRAL SPECIES	19	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT01030000238073	ENSGT00940000165267	ENSGT00440000033811	ENSGT00390000003428	ENSGT00940000164461	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695
Marmotini	ANCESTRAL SPECIES	26	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453.f	ENSGT01030000238073	ENSGT00940000165267	ENSGT00940000159453.e.a	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00940000164461	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h
Marmotini_b	ANCESTRAL SPECIES	48	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453.f	ENSGT01030000238073	ENSGT00940000165267	ENSGT00940000159453.e.a	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00940000164461	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00390000005534.b.b.c.b.b.a.a	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285
Arctic ground squirrel	MODERN SPECIES	2	RASL11B (ENSUPAG00010020408)	SCFD2 (ENSUPAG00010020412) #7	ENSUPAG00010020429	LNX1 (ENSUPAG00010020578) #9	CHIC2 (ENSUPAG00010020698) #10	GSX2 (ENSUPAG00010020700) #11	PDGFRA (ENSUPAG00010020707) #12	KIT (ENSUPAG00010020754) #14	KDR (ENSUPAG00010020785) #15	SRD5A3 (ENSUPAG00010020831) #16	TMEM165 (ENSUPAG00010020837) #17	CLOCK (ENSUPAG00010020844) #18	PDCL2 (ENSUPAG00010020882) #19	NMU (ENSUPAG00010020889)	EXOC1L (ENSUPAG00010020900) #21	EXOC1 (ENSUPAG00010020914) #22	ENSUPAG00010021057	CRACD (ENSUPAG00010021307)	AASDH (ENSUPAG00010021378)	PPAT (ENSUPAG00010021383)	ENSUPAG00010021392	ENSUPAG00010021395	ENSUPAG00010021399	ENSUPAG00010021417	SRP72 (ENSUPAG00010021425)	ENSUPAG00010021446	ARL9 (ENSUPAG00010021448)	THEGL (ENSUPAG00010000026)	HOPX (ENSUPAG00010000088)	ENSUPAG00010000093	ENSUPAG00010000100
Squirrel	MODERN SPECIES	82	SCFD2 (ENSSTOG00000012162) #7	ENSSTOG00000012166	LNX1 (ENSSTOG00000012178) #9	CHIC2 (ENSSTOG00000023668) #10	GSX2 (ENSSTOG00000023286) #11	PDGFRA (ENSSTOG00000011314) #12	KIT (ENSSTOG00000000752) #14	KDR (ENSSTOG00000016171) #15	SRD5A3 (ENSSTOG00000016177) #16	TMEM165 (ENSSTOG00000025897) #17	CLOCK (ENSSTOG00000016179) #18	PDCL2 (ENSSTOG00000006124) #19	NMU (ENSSTOG00000006143)	ENSSTOG00000033766	EXOC1L (ENSSTOG00000010455) #21	EXOC1 (ENSSTOG00000023883) #22	CEP135 (ENSSTOG00000000223)	ENSSTOG00000032240	ENSSTOG00000028370	AASDH (ENSSTOG00000007226)	PPAT (ENSSTOG00000007261)	PAICS (ENSSTOG00000007284)	SRP72 (ENSSTOG00000007305)	ENSSTOG00000032028	ARL9 (ENSSTOG00000007333)	THEGL (ENSSTOG00000029529)	HOPX (ENSSTOG00000007356)	ENSSTOG00000024885	ENSSTOG00000007375	NOA1 (ENSSTOG00000003793)	POLR2B (ENSSTOG00000003815)
Alpin marmot	MODERN SPECIES	9	RASL11B (ENSMMMG00000020096)	SCFD2 (ENSMMMG00000020102) #7	ENSMMMG00000020140	LNX1 (ENSMMMG00000020305) #9	CHIC2 (ENSMMMG00000020457) #10	GSX2 (ENSMMMG00000020460) #11	PDGFRA (ENSMMMG00000020466) #12	KIT (ENSMMMG00000020518) #14	KDR (ENSMMMG00000020555) #15	SRD5A3 (ENSMMMG00000020584) #16	TMEM165 (ENSMMMG00000020591) #17	CLOCK (ENSMMMG00000020601) #18	PDCL2 (ENSMMMG00000020666) #19	NMU (ENSMMMG00000020691)	EXOC1L (ENSMMMG00000020698) #21	EXOC1 (ENSMMMG00000020709) #22	ENSMMMG00000020762	CRACD (ENSMMMG00000020998)	AASDH (ENSMMMG00000021120)	ENSMMMG00000021205	ENSMMMG00000021211	PAICS (ENSMMMG00000021214)	SRP72 (ENSMMMG00000021224)	ARL9 (ENSMMMG00000021256)	THEGL (ENSMMMG00000021263)	HOPX (ENSMMMG00000021270)	ENSMMMG00000021272	REST (ENSMMMG00000021279)	NOA1 (ENSMMMG00000021281)	ENSMMMG00000021288	IGFBP7 (ENSMMMG00000021298)
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	18	SCFD2 (ENSSVLG00005022776) #7	FIP1L1 (ENSSVLG00005022448) #8	LNX1 (ENSSVLG00005022254) #9	ENSSVLG00005022179	CHIC2 (ENSSVLG00005022117) #10	GSX2 (ENSSVLG00005022055) #11	PDGFRA (ENSSVLG00005022004) #12	KIT (ENSSVLG00005021747) #14	KDR (ENSSVLG00005021516) #15	SRD5A3 (ENSSVLG00005021472) #16	TMEM165 (ENSSVLG00005021425) #17	CLOCK (ENSSVLG00005021388) #18	PDCL2 (ENSSVLG00005021329) #19	NMU (ENSSVLG00005020969)	EXOC1L (ENSSVLG00005020891) #21	ENSSVLG00005020590 #22	ENSSVLG00005020514	CRACD (ENSSVLG00005020021)	AASDH (ENSSVLG00005019805)	ENSSVLG00005019738	PPAT (ENSSVLG00005019646)	ENSSVLG00005019565	SRP72 (ENSSVLG00005019460)	ARL9 (ENSSVLG00005019282)	THEGL (ENSSVLG00005019068)	HOPX (ENSSVLG00005019020)	ENSSVLG00005018966	REST (ENSSVLG00005018896)	NOA1 (ENSSVLG00005018806)	POLR2B (ENSSVLG00005018501)	IGFBP7 (ENSSVLG00005018424)
Eurasian red squirrel	MODERN SPECIES	11	TBC1D21 (ENSSVLG00005014797)	LOXL1 (ENSSVLG00005015149)	STOML1 (ENSSVLG00005015186)	PML (ENSSVLG00005015325)	ISLR2 (ENSSVLG00005015492)	ISLR (ENSSVLG00005015502)	STRA6 (ENSSVLG00005015566)	CCDC33 (ENSSVLG00005016264)	CYP11A1 (ENSSVLG00005016426)	SEMA7A (ENSSVLG00005016591)	UBL7 (ENSSVLG00005016929)	ARID3B (ENSSVLG00005016981)	ENSSVLG00005017093	CLK3 (ENSSVLG00005017141)	ENSSVLG00005017169	EXOC1 (ENSSVLG00005017188) #22	CYP1A1 (ENSSVLG00005017319)	ENSSVLG00005017497	CYP1A2 (ENSSVLG00005017562)	CSK (ENSSVLG00005017636)	CPLX3 (ENSSVLG00005018221)	ULK3 (ENSSVLG00005018262)	SCAMP2 (ENSSVLG00005018318)	MPI (ENSSVLG00005018379)	FAM219B (ENSSVLG00005018600)	ENSSVLG00005018668	RPP25 (ENSSVLG00005018756)	SCAMP5 (ENSSVLG00005018788)	PPCDC (ENSSVLG00005018891)	C15orf39 (ENSSVLG00005019039)	ENSSVLG00005019078
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT01080000257472 #8	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Carnivora	ANCESTRAL SPECIES	5	ENSGT01080000257472 #8	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Felidae	ANCESTRAL SPECIES	4	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000154694.i.b	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Panthera	ANCESTRAL SPECIES	5	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000154694.i.b	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Tiger	MODERN SPECIES	70						CHIC2 (ENSPTIG00000020211) #10	PDGFRA (ENSPTIG00000019036) #12	KIT (ENSPTIG00000015998) #14	KDR (ENSPTIG00000014834) #15	SRD5A3 (ENSPTIG00000014194) #16	TMEM165 (ENSPTIG00000013651) #17	CLOCK (ENSPTIG00000013043) #18	PDCL2 (ENSPTIG00000012820) #19	NMU (ENSPTIG00000009380)	EXOC1L (ENSPTIG00000008693) #21	EXOC1 (ENSPTIG00000008114) #22	CEP135 (ENSPTIG00000006900)	CRACD (ENSPTIG00000004246)	AASDH (ENSPTIG00000021513)	ENSPTIG00000005874	PPAT (ENSPTIG00000021270)	PAICS (ENSPTIG00000020595)	SRP72 (ENSPTIG00000018786)	ARL9 (ENSPTIG00000017426)	ENSPTIG00000016060	REST (ENSPTIG00000013767)	NOA1 (ENSPTIG00000012020)	POLR2B (ENSPTIG00000019588)	IGFBP7 (ENSPTIG00000019021)
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000154694.i.b	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00940000164461	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
lion	MODERN SPECIES	4	SCFD2 (ENSPLOG00000003440) #7	FIP1L1 (ENSPLOG00000003542) #8	LNX1 (ENSPLOG00000003661) #9	CHIC2 (ENSPLOG00000003696) #10	GSX2 (ENSPLOG00000003713) #11	PDGFRA (ENSPLOG00000003742) #12	ENSPLOG00000003776	KIT (ENSPLOG00000003794) #14	KDR (ENSPLOG00000003825) #15	SRD5A3 (ENSPLOG00000003868) #16	TMEM165 (ENSPLOG00000003883) #17	CLOCK (ENSPLOG00000003907) #18	PDCL2 (ENSPLOG00000003923) #19	NMU (ENSPLOG00000003965)	EXOC1L (ENSPLOG00000004058) #21	EXOC1 (ENSPLOG00000004076) #22	CEP135 (ENSPLOG00000004109)	CRACD (ENSPLOG00000004162)	AASDH (ENSPLOG00000004176)	PPAT (ENSPLOG00000004193)	ENSPLOG00000004203	PAICS (ENSPLOG00000004213)	SRP72 (ENSPLOG00000004272)	ENSPLOG00000004320	THEGL (ENSPLOG00000004336)	HOPX (ENSPLOG00000004353)	ENSPLOG00000004367	REST (ENSPLOG00000004383)	NOA1 (ENSPLOG00000004394)	POLR2B (ENSPLOG00000004422)	IGFBP7 (ENSPLOG00000004461)
leopard	MODERN SPECIES	2	FIP1L1 (ENSPPRG00000002221) #8	LNX1 (ENSPPRG00000003037) #9	CHIC2 (ENSPPRG00000003452) #10	GSX2 (ENSPPRG00000003871) #11	ENSPPRG00000003939	PDGFRA (ENSPPRG00000004078) #12	KIT (ENSPPRG00000004930) #14	KDR (ENSPPRG00000005424) #15	SRD5A3 (ENSPPRG00000005520) #16	TMEM165 (ENSPPRG00000005927) #17	CLOCK (ENSPPRG00000006916) #18	PDCL2 (ENSPPRG00000006963) #19	NMU (ENSPPRG00000007536)	EXOC1L (ENSPPRG00000007673) #21	ENSPPRG00000008233	EXOC1 (ENSPPRG00000008449) #22	CEP135 (ENSPPRG00000009012)	CRACD (ENSPPRG00000010895)	AASDH (ENSPPRG00000013116)	PPAT (ENSPPRG00000013619)	PAICS (ENSPPRG00000014288)	SRP72 (ENSPPRG00000015991)	ENSPPRG00000017715	THEGL (ENSPPRG00000018282)	HOPX (ENSPPRG00000024713)	ENSPPRG00000024410	ENSPPRG00000023965	NOA1 (ENSPPRG00000023695)	POLR2B (ENSPPRG00000001235)	IGFBP7 (ENSPPRG00000002033)	ENSPPRG00000002918
Cat	MODERN SPECIES	235	SCFD2 (ENSFCAG00000007895) #7	FIP1L1 (ENSFCAG00000022148)	LNX1 (ENSFCAG00000007897) #9	CHIC2 (ENSFCAG00000045270) #10	GSX2 (ENSFCAG00000025271) #11	ENSFCAG00000024388	PDGFRA (ENSFCAG00000009141) #12	KIT (ENSFCAG00000003112) #14	KDR (ENSFCAG00000009679) #15	SRD5A3 (ENSFCAG00000028749) #16	TMEM165 (ENSFCAG00000029712) #17	CLOCK (ENSFCAG00000001064) #18	PDCL2 (ENSFCAG00000024688) #19	NMU (ENSFCAG00000034809)	EXOC1L (ENSFCAG00000034057) #21	EXOC1 (ENSFCAG00000018823) #22	CEP135 (ENSFCAG00000014189)	CRACD (ENSFCAG00000006569)	AASDH (ENSFCAG00000006574)	PPAT (ENSFCAG00000026916)	PAICS (ENSFCAG00000028186)	SRP72 (ENSFCAG00000027600)	ARL9 (ENSFCAG00000001942)	THEGL (ENSFCAG00000023281)	HOPX (ENSFCAG00000032905)	ENSFCAG00000036073	REST (ENSFCAG00000046155)	NOA1 (ENSFCAG00000024100)	POLR2B (ENSFCAG00000003905)	IGFBP7 (ENSFCAG00000025634)	ENSFCAG00000047897
Caniformia	ANCESTRAL SPECIES	7	ENSGT00390000011192 #7	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h.m	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Canidae	ANCESTRAL SPECIES	51	ENSGT00390000011192 #7	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000154277.a.b.b	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h.m	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Canis_lupus	ANCESTRAL SPECIES	19	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h.m	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00390000006370.h.b
Dog	MODERN SPECIES	4	RASL11B (ENSCAFG00845011251)	SCFD2 (ENSCAFG00845011397) #7	FIP1L1 (ENSCAFG00845011572) #8	LNX1 (ENSCAFG00845011670) #9	CHIC2 (ENSCAFG00845011712) #10	GSX2 (ENSCAFG00845011743) #11	PDGFRA (ENSCAFG00845011775) #12	KIT (ENSCAFG00845011904) #14	KDR (ENSCAFG00845012083) #15	SRD5A3 (ENSCAFG00845012266) #16	TMEM165 (ENSCAFG00845012298) #17	CLOCK (ENSCAFG00845012371) #18	PDCL2 (ENSCAFG00845012470) #19	ENSCAFG00845012506	EXOC1L (ENSCAFG00845012675) #21	EXOC1 (ENSCAFG00845012783) #22	CEP135 (ENSCAFG00845013097)	ENSCAFG00845013140	PAICS (ENSCAFG00845013190)	AASDH (ENSCAFG00845013462)	PPAT (ENSCAFG00845013561)	ENSCAFG00845013641	SRP72 (ENSCAFG00845013778)	ARL9 (ENSCAFG00845013838)	ENSCAFG00845013850	THEGL (ENSCAFG00845013867)	SPINK2 (ENSCAFG00845013914)	REST (ENSCAFG00845013968)	NOA1 (ENSCAFG00845013997)	POLR2B (ENSCAFG00845014082)	ENSCAFG00845014179
Dingo	MODERN SPECIES	2	SCFD2 (ENSCAFG00020001766) #7	ENSCAFG00020001745	LNX1 (ENSCAFG00020001736) #9	CHIC2 (ENSCAFG00020001719) #10	GSX2 (ENSCAFG00020001709) #11	PDGFRA (ENSCAFG00020001700) #12	KIT (ENSCAFG00020001613) #14	KDR (ENSCAFG00020000430) #15	SRD5A3 (ENSCAFG00020000287) #16	TMEM165 (ENSCAFG00020000158) #17	ENSCAFG00020027547	CLOCK (ENSCAFG00020027545) #18	PDCL2 (ENSCAFG00020027543) #19	NMU (ENSCAFG00020027542)	EXOC1L (ENSCAFG00020027541) #21	EXOC1 (ENSCAFG00020027483) #22	CEP135 (ENSCAFG00020027412)	ENSCAFG00020027408	ENSCAFG00020027407	ENSCAFG00020027406	AASDH (ENSCAFG00020027394)	ENSCAFG00020027392	ENSCAFG00020027391	ENSCAFG00020027390	ENSCAFG00020027388	PAICS (ENSCAFG00020027386)	SRP72 (ENSCAFG00020027338)	ARL9 (ENSCAFG00020027325)	THEGL (ENSCAFG00020027324)	ENSCAFG00020027323	ENSCAFG00020027322
Red fox	MODERN SPECIES	46						ENSVVUG00000006255	KDR (ENSVVUG00000006238) #15	SRD5A3 (ENSVVUG00000006231) #16	TMEM165 (ENSVVUG00000006222) #17	CLOCK (ENSVVUG00000006192) #18	PDCL2 (ENSVVUG00000006189) #19	NMU (ENSVVUG00000006186)	ENSVVUG00000006183	ENSVVUG00000006178	EXOC1L (ENSVVUG00000006172) #21	EXOC1 (ENSVVUG00000006129) #22	CEP135 (ENSVVUG00000006104)	ENSVVUG00000006094	ENSVVUG00000006086	AASDH (ENSVVUG00000006048)	PPAT (ENSVVUG00000006040)	ENSVVUG00000006031	SRP72 (ENSVVUG00000006020)	ARL9 (ENSVVUG00000006013)	THEGL (ENSVVUG00000006009)	HOPX (ENSVVUG00000006003)	REST (ENSVVUG00000005996)	NOA1 (ENSVVUG00000005990)	POLR2B (ENSVVUG00000005979)	ENSVVUG00000005970	ENSVVUG00000005965
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397.d	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h.m	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Mustelinae	ANCESTRAL SPECIES	63	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397.d	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h.m	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Ferret	MODERN SPECIES	376							KDR (ENSMPUG00000005172) #15	ENSMPUG00000005130	SRD5A3 (ENSMPUG00000005123) #16	TMEM165 (ENSMPUG00000005115) #17	CLOCK (ENSMPUG00000005091) #18	PDCL2 (ENSMPUG00000005085) #19	NMU (ENSMPUG00000005077)	ENSMPUG00000005075	EXOC1L (ENSMPUG00000005069) #21	EXOC1 (ENSMPUG00000005058) #22	CEP135 (ENSMPUG00000005044)	CRACD (ENSMPUG00000005013)	AASDH (ENSMPUG00000004939)	ENSMPUG00000004934	PPAT (ENSMPUG00000004919)	PAICS (ENSMPUG00000004843)	SRP72 (ENSMPUG00000004828)	THEGL (ENSMPUG00000004814)	ENSMPUG00000004755	ENSMPUG00000004749	ENSMPUG00000004739	REST (ENSMPUG00000004729)	NOA1 (ENSMPUG00000004722)	POLR2B (ENSMPUG00000004698)	IGFBP7 (ENSMPUG00000004682)
American mink	MODERN SPECIES	36	SCFD2 (ENSNVIG00000013759) #7	ENSNVIG00000013777	LNX1 (ENSNVIG00000013941) #9	CHIC2 (ENSNVIG00000013967) #10	GSX2 (ENSNVIG00000013995) #11	PDGFRA (ENSNVIG00000014002) #12	KIT (ENSNVIG00000014054) #14	KDR (ENSNVIG00000014095) #15	SRD5A3 (ENSNVIG00000014170) #16	ENSNVIG00000014184 #17	ENSNVIG00000014196 #17	CLOCK (ENSNVIG00000014200) #18	PDCL2 (ENSNVIG00000014277) #19	NMU (ENSNVIG00000014304)	EXOC1L (ENSNVIG00000014460) #21	EXOC1 (ENSNVIG00000014472) #22	CEP135 (ENSNVIG00000014670)	CRACD (ENSNVIG00000014697)	AASDH (ENSNVIG00000014818)	PPAT (ENSNVIG00000014855)	ENSNVIG00000014891	ENSNVIG00000014894	PAICS (ENSNVIG00000014905)	SRP72 (ENSNVIG00000014939)	ARL9 (ENSNVIG00000015049)	THEGL (ENSNVIG00000015081)	HOPX (ENSNVIG00000015104)	ENSNVIG00000015113	ENSNVIG00000015150	NOA1 (ENSNVIG00000015189)	POLR2B (ENSNVIG00000015208)
Ursidae	ANCESTRAL SPECIES	29	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397.d	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h.m	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a.n
Giant Panda	MODERN SPECIES	2	SCFD2 (ENSAMEG00000008113) #7	ENSAMEG00000029850	ENSAMEG00000008072	LNX1 (ENSAMEG00000008041) #9	CHIC2 (ENSAMEG00000018348) #10	GSX2 (ENSAMEG00000025732) #11	PDGFRA (ENSAMEG00000018351) #12	KIT (ENSAMEG00000018372) #14	KDR (ENSAMEG00000018407) #15	SRD5A3 (ENSAMEG00000031461) #16	TMEM165 (ENSAMEG00000018419) #17	CLOCK (ENSAMEG00000018420) #18	PDCL2 (ENSAMEG00000018422) #19	NMU (ENSAMEG00000018424)	EXOC1L (ENSAMEG00000008259) #21	EXOC1 (ENSAMEG00000008260) #22	CEP135 (ENSAMEG00000008299)	CRACD (ENSAMEG00000008359)	AASDH (ENSAMEG00000008375)	ENSAMEG00000020262	PPAT (ENSAMEG00000008404)	ENSAMEG00000008439	SRP72 (ENSAMEG00000008469)	ARL9 (ENSAMEG00000008523)	THEGL (ENSAMEG00000008530)	HOPX (ENSAMEG00000028847)	ENSAMEG00000030748	REST (ENSAMEG00000008541)	NOA1 (ENSAMEG00000008549)	POLR2B (ENSAMEG00000008561)	IGFBP7 (ENSAMEG00000027871)
Ursus	ANCESTRAL SPECIES	51	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397.d	ENSGT00940000154630.b	ENSGT00980000200333	ENSGT00530000064285	ENSGT00940000155341.h.m	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a.n
Polar bear	MODERN SPECIES	234	USP46 (ENSUMAG00000002673)	ENSUMAG00000002701 #7	ENSUMAG00000002706 #7	ENSUMAG00000002758	LNX1 (ENSUMAG00000003515) #9	CHIC2 (ENSUMAG00000003571) #10	PDGFRA (ENSUMAG00000003589) #12	KIT (ENSUMAG00000003838) #14	KDR (ENSUMAG00000005658) #15	SRD5A3 (ENSUMAG00000006102) #16	TMEM165 (ENSUMAG00000006121) #17	CLOCK (ENSUMAG00000006220) #18	PDCL2 (ENSUMAG00000006766) #19	NMU (ENSUMAG00000006770)	EXOC1L (ENSUMAG00000006777) #21	EXOC1 (ENSUMAG00000006898) #22	CEP135 (ENSUMAG00000007857)	CRACD (ENSUMAG00000007889)	AASDH (ENSUMAG00000007970)	PPAT (ENSUMAG00000007982)	ENSUMAG00000007988	ENSUMAG00000007992	PAICS (ENSUMAG00000008003)	SRP72 (ENSUMAG00000008151)	ARL9 (ENSUMAG00000008158)	THEGL (ENSUMAG00000008173)	ENSUMAG00000008192	ENSUMAG00000008198	REST (ENSUMAG00000008208)	NOA1 (ENSUMAG00000008221)	POLR2B (ENSUMAG00000008247)
American black bear	DUPLICATION
American black bear	MODERN SPECIES	1127													PDCL2 (ENSUAMG00000006343) #19	NMU (ENSUAMG00000006338)	EXOC1L (ENSUAMG00000006335) #21	ENSUAMG00000006323 #22
American black bear	MODERN SPECIES	1128																EXOC1 (ENSUAMG00000006355) #22
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00940000162578	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Equus	ANCESTRAL SPECIES	12	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00950000183144.A.i.a.b.f	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000169858	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C
Horse	MODERN SPECIES	22	SCFD2 (ENSECAG00000002235) #7	FIP1L1 (ENSECAG00000019415) #8	LNX1 (ENSECAG00000017017) #9	GSX2 (ENSECAG00000013430) #11	CHIC2 (ENSECAG00000014019) #10	PDGFRA (ENSECAG00000018176) #12	KIT (ENSECAG00000012032) #14	ENSECAG00000011833	KDR (ENSECAG00000019429) #15	SRD5A3 (ENSECAG00000047094) #16	TMEM165 (ENSECAG00000018843) #17	CLOCK (ENSECAG00000006331) #18	PDCL2 (ENSECAG00000025160) #19	NMU (ENSECAG00000025148)	EXOC1L (ENSECAG00000035811) #21	EXOC1 (ENSECAG00000023793) #22	CEP135 (ENSECAG00000014393)	AASDH (ENSECAG00000009502)	CRACD (ENSECAG00000013781)	ENSECAG00000001025	PPAT (ENSECAG00000023644)	PAICS (ENSECAG00000019862)	SRP72 (ENSECAG00000006920)	ENSECAG00000055241	THEGL (ENSECAG00000004708)	HOPX (ENSECAG00000029287)	ENSECAG00000001010	ENSECAG00000035335	REST (ENSECAG00000022536)	NOA1 (ENSECAG00000020627)	POLR2B (ENSECAG00000013610)
Donkey	MODERN SPECIES	22	ENSEASG00005019566	LNX1 (ENSEASG00005019513) #9	CHIC2 (ENSEASG00005033054) #10	GSX2 (ENSEASG00005019509) #11	PDGFRA (ENSEASG00005019499) #12	ENSEASG00005024773 #12	KIT (ENSEASG00005019490) #14	ENSEASG00005019484	KDR (ENSEASG00005019475) #15	SRD5A3 (ENSEASG00005019468) #16	TMEM165 (ENSEASG00005019466) #17	CLOCK (ENSEASG00005018895) #18	PDCL2 (ENSEASG00005018854) #19	NMU (ENSEASG00005038160)	EXOC1L (ENSEASG00005018850) #21	EXOC1 (ENSEASG00005018001) #22	CEP135 (ENSEASG00005017805)	CRACD (ENSEASG00005017786)	AASDH (ENSEASG00005017782)	PPAT (ENSEASG00005017759)	ENSEASG00005017751	SRP72 (ENSEASG00005017747)	ARL9 (ENSEASG00005036423)	THEGL (ENSEASG00005017742)	HOPX (ENSEASG00005028313)	ENSEASG00005038392	ENSEASG00005032877	REST (ENSEASG00005029004)	NOA1 (ENSEASG00005017733)	POLR2B (ENSEASG00005017727)	IGFBP7 (ENSEASG00005025432)
Chiroptera	ANCESTRAL SPECIES	9	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00940000164461	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Megabat	MODERN SPECIES	3570																EXOC1 (ENSPVAG00000016549) #22	CEP135 (ENSPVAG00000016550)
Microchiroptera	ANCESTRAL SPECIES	10	ENSGT00390000011192 #7	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00940000164461	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Microbat	MODERN SPECIES	1064	ENSMLUG00000006503	LNX1 (ENSMLUG00000006515) #9	ENSMLUG00000022409	CHIC2 (ENSMLUG00000013335) #10	GSX2 (ENSMLUG00000006733) #11	PDGFRA (ENSMLUG00000006741) #12	ENSMLUG00000027786	KIT (ENSMLUG00000002438) #14	ENSMLUG00000027233	KDR (ENSMLUG00000013716) #15	SRD5A3 (ENSMLUG00000001485) #16	TMEM165 (ENSMLUG00000009990) #17	CLOCK (ENSMLUG00000010007) #18	PDCL2 (ENSMLUG00000009499) #19	EXOC1L (ENSMLUG00000022227) #21	EXOC1 (ENSMLUG00000015012) #22	CEP135 (ENSMLUG00000015028)	CRACD (ENSMLUG00000007250)	AASDH (ENSMLUG00000007266)	PPAT (ENSMLUG00000007298)	PAICS (ENSMLUG00000007316)	SRP72 (ENSMLUG00000007344)	ARL9 (ENSMLUG00000007385)	ENSMLUG00000024812	ENSMLUG00000003915	REST (ENSMLUG00000014530)	NOA1 (ENSMLUG00000029379)	ENSMLUG00000016746	ENSMLUG00000016764
Greater horseshoe bat	MODERN SPECIES	23	ENSRFEG00010003908	LNX1 (ENSRFEG00010004004) #9	CHIC2 (ENSRFEG00010004049) #10	GSX2 (ENSRFEG00010004072) #11	PDGFRA (ENSRFEG00010004089) #12	ENSRFEG00010004150	KIT (ENSRFEG00010004158) #14	KDR (ENSRFEG00010004198) #15	SRD5A3 (ENSRFEG00010004226) #16	TMEM165 (ENSRFEG00010004276) #17	ENSRFEG00010004298	CLOCK (ENSRFEG00010004324) #18	PDCL2 (ENSRFEG00010004389) #19	NMU (ENSRFEG00010004411)	EXOC1L (ENSRFEG00010004444) #21	EXOC1 (ENSRFEG00010004491) #22	CEP135 (ENSRFEG00010004587)	CRACD (ENSRFEG00010004644)	AASDH (ENSRFEG00010004690)	PPAT (ENSRFEG00010004725)	ENSRFEG00010004742	ENSRFEG00010004746	SRP72 (ENSRFEG00010004765)	ARL9 (ENSRFEG00010004781)	THEGL (ENSRFEG00010004797)	HOPX (ENSRFEG00010004815)	ENSRFEG00010004833	REST (ENSRFEG00010004854)	NOA1 (ENSRFEG00010004863)	POLR2B (ENSRFEG00010004893)	IGFBP7 (ENSRFEG00010004923)
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.i.a	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.i.a	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Artiodactyla_b	ANCESTRAL SPECIES	16	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.i.a	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Cetacea	ANCESTRAL SPECIES	12	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.j	ENSGT00940000155341.g.a.a.b	ENSGT00940000155341.g.b	ENSGT00390000001695	ENSGT00950000183132.C
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039.a.a	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00440000038159.qb	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.j	ENSGT00940000155341.g.a.a.b	ENSGT00940000163344.b	ENSGT00390000006100.g.b
Odontoceti_a	ANCESTRAL SPECIES	23	ENSGT00390000011192 #7	ENSGT01080000257472 #8	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039.a.a	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00440000038159.qb	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.j	ENSGT00940000155341.g.a.a.b	ENSGT00940000163344.b	ENSGT00390000006100.g.b
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00390000011192 #7	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920.g #16	ENSGT00390000005261 #17	ENSGT00910000148039.a.a	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00440000038159.qb	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.j	ENSGT00940000155341.g.a.a.b	ENSGT00940000163344.b	ENSGT00390000006100.g.b
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00390000011192 #7	ENSGT01060000248700	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920.g #16	ENSGT00390000005261 #17	ENSGT00910000148039.a.a	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00440000038159.qb	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.j	ENSGT00940000155341.g.a.a.b	ENSGT00940000163344.b	ENSGT00390000006100.g.b
Narwhal	MODERN SPECIES	307	RASL11B (ENSMMNG00015013438)	SCFD2 (ENSMMNG00015013410) #7	ENSMMNG00015013310	LNX1 (ENSMMNG00015013246) #9	CHIC2 (ENSMMNG00015013218) #10	GSX2 (ENSMMNG00015013194) #11	PDGFRA (ENSMMNG00015013167) #12	KIT (ENSMMNG00015013144) #14	KDR (ENSMMNG00015013066) #15	ENSMMNG00015013038 #16	TMEM165 (ENSMMNG00015013015) #17	CLOCK (ENSMMNG00015012990) #18	PDCL2 (ENSMMNG00015012976) #19	NMU (ENSMMNG00015012920)	EXOC1L (ENSMMNG00015012879) #21	EXOC1 (ENSMMNG00015012800) #22	CEP135 (ENSMMNG00015012654)	ENSMMNG00015012615	CRACD (ENSMMNG00015012549)	AASDH (ENSMMNG00015012429)	ENSMMNG00015012406	PPAT (ENSMMNG00015012362)	PAICS (ENSMMNG00015012325)	SRP72 (ENSMMNG00015012225)	ENSMMNG00015012186	ENSMMNG00015012180	THEGL (ENSMMNG00015012165)	HOPX (ENSMMNG00015012141)	ENSMMNG00015012122	ENSMMNG00015012062	ENSMMNG00015012049
Beluga whale	MODERN SPECIES	77	RASL11B (ENSDLEG00000014914)	SCFD2 (ENSDLEG00000014865) #7	FIP1L1 (ENSDLEG00000014828)	LNX1 (ENSDLEG00000014802) #9	CHIC2 (ENSDLEG00000014791) #10	GSX2 (ENSDLEG00000014788) #11	PDGFRA (ENSDLEG00000014750) #12	KIT (ENSDLEG00000014712) #14	KDR (ENSDLEG00000014628) #15	ENSDLEG00000014576 #16	TMEM165 (ENSDLEG00000014557) #17	ENSDLEG00000014547	CLOCK (ENSDLEG00000014479) #18	PDCL2 (ENSDLEG00000014453) #19	EXOC1L (ENSDLEG00000014446) #21	EXOC1 (ENSDLEG00000014416) #22	CEP135 (ENSDLEG00000014370)	KIAA1211 (ENSDLEG00000014302)	AASDH (ENSDLEG00000014259)	ENSDLEG00000014169	ENSDLEG00000014072	SRP72 (ENSDLEG00000014021)	ARL9 (ENSDLEG00000014007)	THEGL (ENSDLEG00000013936)	HOPX (ENSDLEG00000013911)	ENSDLEG00000013894	ENSDLEG00000013880	ENSDLEG00000013873	LAMTOR2 (ENSDLEG00000013858)	ENSDLEG00000013849	NOA1 (ENSDLEG00000013832)
Vaquita	MODERN SPECIES	16	SCFD2 (ENSPSNG00000005058) #7	FIP1L1 (ENSPSNG00000005133) #8	LNX1 (ENSPSNG00000005217) #9	CHIC2 (ENSPSNG00000000109) #10	GSX2 (ENSPSNG00000000136) #11	PDGFRA (ENSPSNG00000000217) #12	KIT (ENSPSNG00000000276) #14	KDR (ENSPSNG00000000325) #15	ENSPSNG00000000366 #16	TMEM165 (ENSPSNG00000000395) #17	ENSPSNG00000000412	CLOCK (ENSPSNG00000000466) #18	PDCL2 (ENSPSNG00000000496) #19	NMU (ENSPSNG00000000572)	EXOC1L (ENSPSNG00000000657) #21	EXOC1 (ENSPSNG00000000713) #22	CEP135 (ENSPSNG00000000783)	ENSPSNG00000000807	CRACD (ENSPSNG00000000906)	AASDH (ENSPSNG00000001136)	ENSPSNG00000001179	ENSPSNG00000001197	PAICS (ENSPSNG00000001214)	SRP72 (ENSPSNG00000001264)	ARL9 (ENSPSNG00000001309)	THEGL (ENSPSNG00000001329)	HOPX (ENSPSNG00000001376)	ENSPSNG00000001402	ENSPSNG00000001425	ENSPSNG00000001451	ENSPSNG00000001480
Dolphin	MODERN SPECIES	3023																EXOC1 (ENSTTRG00000014807) #22	CEP135 (ENSTTRG00000014812)
Sperm whale	MODERN SPECIES	18	FIP1L1 (ENSPCTG00005005849) #8	LNX1 (ENSPCTG00005005759) #9	CHIC2 (ENSPCTG00005005704) #10	GSX2 (ENSPCTG00005005685) #11	PDGFRA (ENSPCTG00005005611) #12	ENSPCTG00005005580	KIT (ENSPCTG00005005506) #14	KDR (ENSPCTG00005005473) #15	SRD5A3 (ENSPCTG00005005446) #16	TMEM165 (ENSPCTG00005005392) #17	ENSPCTG00005005382	CLOCK (ENSPCTG00005005343) #18	PDCL2 (ENSPCTG00005005309) #19	NMU (ENSPCTG00005005187)	EXOC1L (ENSPCTG00005005136) #21	EXOC1 (ENSPCTG00005004932) #22	CEP135 (ENSPCTG00005004883)	ENSPCTG00005004860	CRACD (ENSPCTG00005004658)	AASDH (ENSPCTG00005004515)	ENSPCTG00005004475	PPAT (ENSPCTG00005004431)	PAICS (ENSPCTG00005004385)	SRP72 (ENSPCTG00005004329)	ARL9 (ENSPCTG00005004276)	THEGL (ENSPCTG00005004247)	HOPX (ENSPCTG00005004233)	ENSPCTG00005004216	ENSPCTG00005004198	ENSPCTG00005004172	ENSPCTG00005004167
Blue whale	MODERN SPECIES	16	RASL11B (ENSBMSG00010002125)	SCFD2 (ENSBMSG00010002107) #7	FIP1L1 (ENSBMSG00010002026) #8	LNX1 (ENSBMSG00010001954) #9	CHIC2 (ENSBMSG00010001906) #10	GSX2 (ENSBMSG00010001890) #11	PDGFRA (ENSBMSG00010001797) #12	KIT (ENSBMSG00010001699) #14	KDR (ENSBMSG00010001647) #15	SRD5A3 (ENSBMSG00010001627) #16	TMEM165 (ENSBMSG00010001577) #17	CLOCK (ENSBMSG00010001545) #18	PDCL2 (ENSBMSG00010001519) #19	NMU (ENSBMSG00010001314)	EXOC1L (ENSBMSG00010001265) #21	EXOC1 (ENSBMSG00010001230) #22	CEP135 (ENSBMSG00010001197)	CRACD (ENSBMSG00010000579)	AASDH (ENSBMSG00010000413)	ENSBMSG00010000372	PPAT (ENSBMSG00010000340)	PAICS (ENSBMSG00010000291)	ENSBMSG00010000244	ARL9 (ENSBMSG00010000197)	ENSBMSG00010000174	THEGL (ENSBMSG00010000109)	HOPX (ENSBMSG00010000065)	ENSBMSG00010014434	ENSBMSG00010014397	ENSBMSG00010014345	NOA1 (ENSBMSG00010014290)
Pecora	ANCESTRAL SPECIES	15	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.i.a	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a
Percora_a	ANCESTRAL SPECIES	18	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00960000187690	ENSGT00940000168854	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.i.a	ENSGT00940000155341.h	ENSGT00390000001695
Bovidae	ANCESTRAL SPECIES	18	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00960000187690	ENSGT00940000168854	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT01020000231484	ENSGT00390000017143	ENSGT00530000064285.i.a	ENSGT00940000155341.h
Caprinae	ANCESTRAL SPECIES	13	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453.d	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172.z	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT01020000231484	ENSGT00390000017143	ENSGT00530000064285.i.a	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00390000018525.a.a.c.b.b	ENSGT00950000183132.C
Rambouillet Sheep	MODERN SPECIES	22	LNX1 (ENSOARG00020014691) #9	CHIC2 (ENSOARG00020014893) #10	GSX2 (ENSOARG00020014973) #11	ENSOARG00020015027	PDGFRA (ENSOARG00020015079) #12	ENSOARG00020015240	KIT (ENSOARG00020015287) #14	KDR (ENSOARG00020015634) #15	SRD5A3 (ENSOARG00020016453) #16	TMEM165 (ENSOARG00020016524) #17	CLOCK (ENSOARG00020016714) #18	PDCL2 (ENSOARG00020017078) #19	NMU (ENSOARG00020017194)	ENSOARG00020017902	EXOC1L (ENSOARG00020017950) #21	EXOC1 (ENSOARG00020018015) #22	ENSOARG00020018714	CEP135 (ENSOARG00020018779)	AASDH (ENSOARG00020019446)	ENSOARG00020019566	SRP72 (ENSOARG00020019666)	THEGL (ENSOARG00020019845)	ENSOARG00020019924	HOPX (ENSOARG00020019962)	ENSOARG00020020007	REST (ENSOARG00020020071)	NOA1 (ENSOARG00020020172)	POLR2B (ENSOARG00020020250)	ENSOARG00020020518	IGFBP7 (ENSOARG00020020541)	ENSOARG00020020669
Goat	MODERN SPECIES	25	ENSCHIG00000025903	LNX1 (ENSCHIG00000017890) #9	CHIC2 (ENSCHIG00000002107) #10	GSX2 (ENSCHIG00000017735) #11	PDGFRA (ENSCHIG00000005194) #12	KIT (ENSCHIG00000022287) #14	ENSCHIG00000007998	KDR (ENSCHIG00000006477) #15	SRD5A3 (ENSCHIG00000019579) #16	TMEM165 (ENSCHIG00000026960) #17	CLOCK (ENSCHIG00000017027) #18	PDCL2 (ENSCHIG00000025455) #19	NMU (ENSCHIG00000012702)	ENSCHIG00000021229	EXOC1L (ENSCHIG00000009195) #21	EXOC1 (ENSCHIG00000022016) #22	ENSCHIG00000009115	CEP135 (ENSCHIG00000020429)	CRACD (ENSCHIG00000010537)	AASDH (ENSCHIG00000022349)	ENSCHIG00000013585	ENSCHIG00000012259	SRP72 (ENSCHIG00000021465)	ARL9 (ENSCHIG00000011839)	THEGL (ENSCHIG00000024675)	ENSCHIG00000016922	HOPX (ENSCHIG00000005024)	ENSCHIG00000022559	ENSCHIG00000015747	ENSCHIG00000026873	NOA1 (ENSCHIG00000017563)
Bovinae	ANCESTRAL SPECIES	15	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00960000187690	ENSGT00940000168854	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT01020000231484	ENSGT00960000187074	ENSGT00390000017143	ENSGT00530000064285.i.a
Bos	ANCESTRAL SPECIES	15	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT01020000231484	ENSGT00390000017143	ENSGT00530000064285.i.a	ENSGT00940000155341.h.s	ENSGT00530000064285.i.b	ENSGT00940000155341.h.t
Bos_b	ANCESTRAL SPECIES	14	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00940000154694.`b	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT01020000231484	ENSGT00390000017143	ENSGT00530000064285.i.a	ENSGT00940000155341.h.s	ENSGT00530000064285.i.b	ENSGT00390000001695	ENSGT00950000183132.C
Hybrid Bos Indicus	MODERN SPECIES	25	CHIC2 (ENSBIXG00005009594) #10	GSX2 (ENSBIXG00005009557) #11	ENSBIXG00005009536	PDGFRA (ENSBIXG00005009519) #12	KIT (ENSBIXG00005009446) #14	KDR (ENSBIXG00005009386) #15	SRD5A3 (ENSBIXG00005009359) #16	TMEM165 (ENSBIXG00005000487) #17	CLOCK (ENSBIXG00005009314) #18	ENSBIXG00005006706	PDCL2 (ENSBIXG00005000440) #19	ENSBIXG00005009252	NMU (ENSBIXG00005009233)	EXOC1L (ENSBIXG00005009164) #21	ENSBIXG00005000404	EXOC1 (ENSBIXG00005009097) #22	CEP135 (ENSBIXG00005008904)	CRACD (ENSBIXG00005006763)	AASDH (ENSBIXG00005008765)	PPAT (ENSBIXG00005008741)	ENSBIXG00005008711	SRP72 (ENSBIXG00005008654)	ARL9 (ENSBIXG00005008627)	THEGL (ENSBIXG00005008619)	ENSBIXG00005008592	HOPX (ENSBIXG00005008550)	ENSBIXG00005008508	REST (ENSBIXG00005008483)	NOA1 (ENSBIXG00005008452)	ENSBIXG00005008433	POLR2B (ENSBIXG00005008419)
Cow	MODERN SPECIES	25	FIP1L1 (ENSBTAG00000020653)	LNX1 (ENSBTAG00000020658) #9	CHIC2 (ENSBTAG00000032660) #10	GSX2 (ENSBTAG00000045812) #11	PDGFRA (ENSBTAG00000007173) #12	KIT (ENSBTAG00000002699) #14	KDR (ENSBTAG00000000782) #15	SRD5A3 (ENSBTAG00000014913) #16	TMEM165 (ENSBTAG00000001269) #17	CLOCK (ENSBTAG00000044044) #18	PDCL2 (ENSBTAG00000001772) #19	ENSBTAG00000054466	NMU (ENSBTAG00000044161)	EXOC1L (ENSBTAG00000045602) #21	ENSBTAG00000022199	EXOC1 (ENSBTAG00000032637) #22	CEP135 (ENSBTAG00000009471)	CRACD (ENSBTAG00000040398)	AASDH (ENSBTAG00000020583)	PPAT (ENSBTAG00000010571)	PAICS (ENSBTAG00000010577)	SRP72 (ENSBTAG00000010593)	ARL9 (ENSBTAG00000010615)	THEGL (ENSBTAG00000051380)	ENSBTAG00000054014	HOPX (ENSBTAG00000002333)	SPINK2B (ENSBTAG00000032560)	RESTB (ENSBTAG00000011789)	NOA1A (ENSBTAG00000019362)	ENSBTAG00000050628	POLR2B (ENSBTAG00000019366)
Bos_a	ANCESTRAL SPECIES	21	ENSGT00940000158643	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00960000187074	ENSGT00390000017143	ENSGT00530000064285.i.a	ENSGT00940000155341.h.s	ENSGT00530000064285.i.b	ENSGT00940000155341.h.t
Wild yak	MODERN SPECIES	1057							KDR (ENSBMUG00000007540) #15	SRD5A3 (ENSBMUG00000007534) #16	TMEM165 (ENSBMUG00000007528) #17	CLOCK (ENSBMUG00000007505) #18	PDCL2 (ENSBMUG00000007483) #19	NMU (ENSBMUG00000007461)	ENSBMUG00000007397	EXOC1L (ENSBMUG00000007377) #21	ENSBMUG00000007369	EXOC1 (ENSBMUG00000007351) #22	CEP135 (ENSBMUG00000007279)	ENSBMUG00000007267	CRACD (ENSBMUG00000007253)	AASDH (ENSBMUG00000007208)	ENSBMUG00000007154	PPAT (ENSBMUG00000007143)	PAICS (ENSBMUG00000007129)	SRP72 (ENSBMUG00000007063)	ARL9 (ENSBMUG00000007007)	THEGL (ENSBMUG00000006996)	ENSBMUG00000006977	HOPX (ENSBMUG00000006965)	ENSBMUG00000006925	ENSBMUG00000006916	ENSBMUG00000006908
Domestic yak	MODERN SPECIES	25	GSX2 (ENSBGRG00000024694) #11	PDGFRA (ENSBGRG00000024258) #12	ENSBGRG00000024188	KIT (ENSBGRG00000023915) #14	KDR (ENSBGRG00000023842) #15	SRD5A3 (ENSBGRG00000023773) #16	TMEM165 (ENSBGRG00000023695) #17	ENSBGRG00000023674	CLOCK (ENSBGRG00000023603) #18	ENSBGRG00000023580	PDCL2 (ENSBGRG00000023560) #19	NMU (ENSBGRG00000023379)	ENSBGRG00000023358	EXOC1L (ENSBGRG00000023320) #21	ENSBGRG00000023272	EXOC1 (ENSBGRG00000023083) #22	CEP135 (ENSBGRG00000022568)	ENSBGRG00000022431	AASDH (ENSBGRG00000022332)	ENSBGRG00000022299	PPAT (ENSBGRG00000022170)	ENSBGRG00000022130	ENSBGRG00000022078	SRP72 (ENSBGRG00000021740)	ARL9 (ENSBGRG00000021704)	THEGL (ENSBGRG00000021615)	HOPX (ENSBGRG00000021582)	ENSBGRG00000021290	NOA1 (ENSBGRG00000021223)	ENSBGRG00000021185	POLR2B (ENSBGRG00000020295)
American bison	MODERN SPECIES	3318	RASL11B (ENSBBBG00000019189)	SCFD2 (ENSBBBG00000019210) #7	FIP1L1 (ENSBBBG00000005000) #8	LNX1 (ENSBBBG00000008518) #9	CHIC2 (ENSBBBG00000005062) #10	GSX2 (ENSBBBG00000019352) #11	PDGFRA (ENSBBBG00000019371) #12	KIT (ENSBBBG00000009185) #14	KDR (ENSBBBG00000005252) #15	SRD5A3 (ENSBBBG00000019492) #16	TMEM165 (ENSBBBG00000005203) #17	CLOCK (ENSBBBG00000005300) #18	PDCL2 (ENSBBBG00000019569) #19	NMU (ENSBBBG00000005197)	EXOC1L (ENSBBBG00000019666) #21	EXOC1 (ENSBBBG00000019735) #22	CEP135 (ENSBBBG00000019772)	ENSBBBG00000019782	ENSBBBG00000005358	AASDH (ENSBBBG00000005384)	ENSBBBG00000019902	ENSBBBG00000019909	PPAT (ENSBBBG00000019920)	PAICS (ENSBBBG00000019953)	SRP72 (ENSBBBG00000020024)	ENSBBBG00000020044	ENSBBBG00000020049	THEGL (ENSBBBG00000020057)	ENSBBBG00000020072	HOPX (ENSBBBG00000007279)	ENSBBBG00000020096
Siberian musk deer	MODERN SPECIES	1266	LNX1 (ENSMMSG00000021431) #9	ENSMMSG00000021416	CHIC2 (ENSMMSG00000021379) #10	GSX2 (ENSMMSG00000021348) #11	ENSMMSG00000021324	PDGFRA (ENSMMSG00000021277) #12	KIT (ENSMMSG00000021225) #14	KDR (ENSMMSG00000021120) #15	ENSMMSG00000021085	SRD5A3 (ENSMMSG00000021061) #16	TMEM165 (ENSMMSG00000021016) #17	CLOCK (ENSMMSG00000020910) #18	PDCL2 (ENSMMSG00000024349) #19	NMU (ENSMMSG00000024331)	EXOC1L (ENSMMSG00000024327) #21	EXOC1 (ENSMMSG00000024323) #22	CEP135 (ENSMMSG00000024320)	ENSMMSG00000024317	ENSMMSG00000024316	AASDH (ENSMMSG00000024311)	ENSMMSG00000024310	ENSMMSG00000024308	PPAT (ENSMMSG00000024306)	PAICS (ENSMMSG00000024303)	SRP72 (ENSMMSG00000024300)	ENSMMSG00000024297	THEGL (ENSMMSG00000024295)	ENSMMSG00000024294	HOPX (ENSMMSG00000024293)	ENSMMSG00000024291	ENSMMSG00000024290
Yarkand deer	MODERN SPECIES	29	ENSCHYG00000012400	LNX1 (ENSCHYG00000013037) #9	CHIC2 (ENSCHYG00000013311) #10	GSX2 (ENSCHYG00000013391) #11	PDGFRA (ENSCHYG00000013443) #12	KIT (ENSCHYG00000013749) #14	KDR (ENSCHYG00000014384) #15	ENSCHYG00000014804	SRD5A3 (ENSCHYG00000014865) #16	TMEM165 (ENSCHYG00000014938) #17	CLOCK (ENSCHYG00000015094) #18	ENSCHYG00000015403	PDCL2 (ENSCHYG00000015434) #19	NMU (ENSCHYG00000015577)	EXOC1L (ENSCHYG00000015920) #21	EXOC1 (ENSCHYG00000016173) #22	CEP135 (ENSCHYG00000016897)	ENSCHYG00000017453	CRACD (ENSCHYG00000017500)	ENSCHYG00000017672	AASDH (ENSCHYG00000017692)	PPAT (ENSCHYG00000017831)	PAICS (ENSCHYG00000017941)	SRP72 (ENSCHYG00000018278)	ENSCHYG00000018979	THEGL (ENSCHYG00000019032)	ENSCHYG00000019140	ENSCHYG00000019165	HOPX (ENSCHYG00000019225)	ENSCHYG00000019329	ENSCHYG00000019423
Camelidae	ANCESTRAL SPECIES	22	ENSGT00390000011192 #7	ENSGT00940000162578	ENSGT00940000158757 #9	ENSGT00390000003601.b #10	ENSGT00940000156043 #11	ENSGT00940000156021 #12	ENSGT00940000155626 #14	ENSGT00940000156710 #15	ENSGT00500000044920 #16	ENSGT00390000005261 #17	ENSGT00910000148039	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00940000164461	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.i.a	ENSGT00940000155341.h.q	ENSGT00940000155341.h.r	ENSGT00390000001695	ENSGT00950000183132.C
Arabian camel	MODERN SPECIES	11	SCFD2 (ENSCDRG00005002450) #7	ENSCDRG00005002298	LNX1 (ENSCDRG00005002225) #9	CHIC2 (ENSCDRG00005002192) #10	ENSCDRG00005002178 #11	PDGFRA (ENSCDRG00005002143) #12	KIT (ENSCDRG00005002100) #14	KDR (ENSCDRG00005002066) #15	SRD5A3 (ENSCDRG00005002056) #16	TMEM165 (ENSCDRG00005002040) #17	ENSCDRG00005002035	CLOCK (ENSCDRG00005002007) #18	PDCL2 (ENSCDRG00005001989) #19	NMU (ENSCDRG00005001974)	EXOC1L (ENSCDRG00005001951) #21	EXOC1 (ENSCDRG00005001838) #22	CEP135 (ENSCDRG00005001801)	ENSCDRG00005001601	AASDH (ENSCDRG00005001547)	ENSCDRG00005001539	PPAT (ENSCDRG00005001530)	PAICS (ENSCDRG00005001516)	ENSCDRG00005001502	THEGL (ENSCDRG00005001451)	HOPX (ENSCDRG00005001424)	ENSCDRG00005001407	ENSCDRG00005001370	ENSCDRG00005001343	GPRIN3 (ENSCDRG00005001337)	TIGD2 (ENSCDRG00005001330)	FAM13A (ENSCDRG00005000724)
Alpaca	MODERN SPECIES	1311									KIT (ENSVPAG00000006432) #14	KDR (ENSVPAG00000006435) #15	SRD5A3 (ENSVPAG00000006436) #16	TMEM165 (ENSVPAG00000006437) #17	CLOCK (ENSVPAG00000006438) #18	PDCL2 (ENSVPAG00000006440) #19	NMU (ENSVPAG00000006441)	EXOC1 (ENSVPAG00000006443) #22	CEP135 (ENSVPAG00000006446)
Suina	ANCESTRAL SPECIES	22											ENSGT00390000005261 #17	ENSGT00940000157580 #18	ENSGT00940000160654 #19	ENSGT00510000048726	ENSGT00940000162193 #21	ENSGT00940000158640 #22	ENSGT00940000159453	ENSGT00940000161471	ENSGT00440000033811	ENSGT00390000003428	ENSGT00390000010172	ENSGT00390000013264.d	ENSGT00940000159397	ENSGT00940000154630.b	ENSGT00390000017143	ENSGT00530000064285.i.a	ENSGT00940000155341.h	ENSGT00390000001695	ENSGT00950000183132.C	ENSGT00530000063555.A.a.a	ENSGT00940000155527
Pig	MODERN SPECIES	16	ENSSSCG00000043916	ENSSSCG00000054836	ENSSSCG00000033699	SMIM31 (ENSSSCG00000038890)	ENSSSCG00000031750	ENSSSCG00000043807	ENSSSCG00000035142	ENSSSCG00000041016	ENSSSCG00000050228	ENSSSCG00000035975	TMEM165 (ENSSSCG00000032234) #17	CLOCK (ENSSSCG00000008909) #18	PDCL2 (ENSSSCG00000008908) #19	NMU (ENSSSCG00000027954)	EXOC1L (ENSSSCG00000022882) #21	EXOC1 (ENSSSCG00000023269) #22	ENSSSCG00000027301	CEP135 (ENSSSCG00000022283)	CRACD (ENSSSCG00000008903)	AASDH (ENSSSCG00000027403)	PPAT (ENSSSCG00000008902)	PAICS (ENSSSCG00000008901)	SRP72 (ENSSSCG00000008900)	ENSSSCG00000008899	ENSSSCG00000032353	ENSSSCG00000008898	ENSSSCG00000038107	ENSSSCG00000023357	ENSSSCG00000036736	ENSSSCG00000058108	NOA1 (ENSSSCG00000025792)
Chacoan peccary	MODERN SPECIES	142											TMEM165 (ENSCWAG00000013831) #17	CLOCK (ENSCWAG00000013627) #18	PDCL2 (ENSCWAG00000013560) #19	NMU (ENSCWAG00000012857)	EXOC1L (ENSCWAG00000012783) #21	EXOC1 (ENSCWAG00000012665) #22	CEP135 (ENSCWAG00000012609)	CRACD (ENSCWAG00000011987)	AASDH (ENSCWAG00000011752)	PPAT (ENSCWAG00000011631)	PAICS (ENSCWAG00000011570)	SRP72 (ENSCWAG00000011477)	ENSCWAG00000011426	HOPX (ENSCWAG00000011388)	ENSCWAG00000011337	REST (ENSCWAG00000011265)	POLR2B (ENSCWAG00000011014)	IGFBP7 (ENSCWAG00000010967)	ADGRL3 (ENSCWAG00000003168)	ENSCWAG00000002865	TECRL (ENSCWAG00000002839)
Eulipotyphla	ANCESTRAL SPECIES	1479																ENSGT00940000158640 #22	ENSGT00940000159453
Hedgehog	MODERN SPECIES	178																EXOC1 (ENSEEUG00000015211) #22	CEP135 (ENSEEUG00000003174)
Common shrew	MODERN SPECIES	8526																EXOC1 (ENSSARG00000011042) #22