Percora_a	ANCESTRAL SPECIES	4	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Bovidae	ANCESTRAL SPECIES	4	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.w #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Bovinae	ANCESTRAL SPECIES	3	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.w #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Bos	ANCESTRAL SPECIES	4	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087.h #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.w #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Bos_a	ANCESTRAL SPECIES	22	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087.h #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.w #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Wild yak	MODERN SPECIES	489											ATP2C2 (ENSBMUG00000014549) #19	ENSBMUG00000014372 ##20	MEAK7 (ENSBMUG00000014359) #20	ENSBMUG00000014339	COTL1 (ENSBMUG00000014321) #21	KLHL36 (ENSBMUG00000014313) #22	USP10 (ENSBMUG00000014300) #23	CRISPLD2 (ENSBMUG00000014239) #24	ZDHHC7 (ENSBMUG00000014218) #25	KIAA0513 (ENSBMUG00000014185) #26	CIBAR2 (ENSBMUG00000014109) #27
Domestic yak	MODERN SPECIES	12	CDH13 (ENSBGRG00000018217)	HSBP1 (ENSBGRG00000018120) #7	MLYCD (ENSBGRG00000018041) #8	ENSBGRG00000017454 #10	SLC38A8 (ENSBGRG00000017192) #11	MBTPS1 (ENSBGRG00000016838) #12	HSDL1 (ENSBGRG00000016765) #13	ENSBGRG00000016699 #14	TAF1C (ENSBGRG00000016626) #15	ADAD2 (ENSBGRG00000016569) #16	KCNG4 (ENSBGRG00000016537) #17	WFDC1 (ENSBGRG00000016423) #18	ATP2C2 (ENSBGRG00000016156) #19	MEAK7 (ENSBGRG00000016002) #20	COTL1 (ENSBGRG00000015897) #21	KLHL36 (ENSBGRG00000015821) #22	USP10 (ENSBGRG00000015567) #23	CRISPLD2 (ENSBGRG00000015210) #24	ZDHHC7 (ENSBGRG00000015026) #25	KIAA0513 (ENSBGRG00000014870) #26	CIBAR2 (ENSBGRG00000014741) #27	GSE1 (ENSBGRG00000013990) #28	GINS2 (ENSBGRG00000013893) #29	ENSBGRG00000013747 #30	EMC8 (ENSBGRG00000013626) #31	ENSBGRG00000013514 #32	IRF8 (ENSBGRG00000013321) #33	FOXF1 (ENSBGRG00000013269) #34	MTHFSD (ENSBGRG00000013171) #35	FOXC2 (ENSBGRG00000013151) #36	ENSBGRG00000013135 #37
Bos_b	ANCESTRAL SPECIES		ENSGT00940000155218.B	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087.h #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.w #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Cow	MODERN SPECIES	9	CDH13 (ENSBTAG00000034373)	HSBP1 (ENSBTAG00000053436) #7	MLYCD (ENSBTAG00000004248) #8	OSGIN1 (ENSBTAG00000012508) #10	SLC38A8 (ENSBTAG00000040086) #11	MBTPS1 (ENSBTAG00000010170) #12	HSDL1 (ENSBTAG00000018770) #13	DNAAF1 (ENSBTAG00000018771) #14	TAF1C (ENSBTAG00000018772) #15	ADAD2 (ENSBTAG00000034283) #16	KCNG4 (ENSBTAG00000016695) #17	WFDC1 (ENSBTAG00000049788) #18	ATP2C2 (ENSBTAG00000000945) #19	MEAK7 (ENSBTAG00000000946) #20	COTL1 (ENSBTAG00000016315) #21	KLHL36 (ENSBTAG00000008385) #22	USP10 (ENSBTAG00000009446) #23	CRISPLD2 (ENSBTAG00000021176) #24	ZDHHC7 (ENSBTAG00000002639) #25	KIAA0513 (ENSBTAG00000020835) #26	CIBAR2 (ENSBTAG00000020836) #27	GSE1 (ENSBTAG00000009918) #28	GINS2 (ENSBTAG00000044006) #29	C18H16orf74 (ENSBTAG00000052744) #30	EMC8 (ENSBTAG00000016075) #31	COX4I1 (ENSBTAG00000016079) #32	IRF8 (ENSBTAG00000017824) #33	FOXF1 (ENSBTAG00000000009) #34	MTHFSD (ENSBTAG00000012446) #35	FOXC2 (ENSBTAG00000012465) #36	FOXL1 (ENSBTAG00000040605) #37
Hybrid Bos Indicus	MODERN SPECIES	9	CDH13 (ENSBIXG00005005903)	HSBP1 (ENSBIXG00005005940) #7	MLYCD (ENSBIXG00005006190) #8	ENSBIXG00005008933 #10	SLC38A8 (ENSBIXG00005008993) #11	MBTPS1 (ENSBIXG00005009072) #12	HSDL1 (ENSBIXG00005009109) #13	ENSBIXG00005000397 #14	TAF1C (ENSBIXG00005009142) #15	ADAD2 (ENSBIXG00005009226) #16	KCNG4 (ENSBIXG00005009246) #17	WFDC1 (ENSBIXG00005009273) #18	ATP2C2 (ENSBIXG00005000481) #19	MEAK7 (ENSBIXG00005009358) #20	ENSBIXG00005009383 #21	KLHL36 (ENSBIXG00005009403) #22	USP10 (ENSBIXG00005000501) #23	CRISPLD2 (ENSBIXG00005009518) #24	ENSBIXG00005009543	ZDHHC7 (ENSBIXG00005009575) #25	KIAA0513 (ENSBIXG00005005913) #26	CIBAR2 (ENSBIXG00005009663) #27	GSE1 (ENSBIXG00005009803) #28	GINS2 (ENSBIXG00005009840) #29	ENSBIXG00005000642 #30	EMC8 (ENSBIXG00005006101) #31	COX4I1 (ENSBIXG00005000673) #32	IRF8 (ENSBIXG00005000680) #33	FOXF1 (ENSBIXG00005009962) #34	MTHFSD (ENSBIXG00005000729) #35	FOXC2 (ENSBIXG00005009988) #36
American bison	MODERN SPECIES	3209	ENSBBBG00000018973 #9	ENSBBBG00000018968 #9	NECAB2 (ENSBBBG00000004817) #10	SLC38A8 (ENSBBBG00000018955) #11	MBTPS1 (ENSBBBG00000004806) #12	HSDL1 (ENSBBBG00000018926) #13	ENSBBBG00000009152 #14	ENSBBBG00000018906 #15	ENSBBBG00000004780 #15	ADAD2 (ENSBBBG00000018893) #16	ENSBBBG00000018855 #17	WFDC1 (ENSBBBG00000018848) #18	ATP2C2 (ENSBBBG00000018817) #19	MEAK7 (ENSBBBG00000018779) #20	COTL1 (ENSBBBG00000004684) #21	KLHL36 (ENSBBBG00000018733) #22	USP10 (ENSBBBG00000018715) #23	CRISPLD2 (ENSBBBG00000018674) #24	ZDHHC7 (ENSBBBG00000004615) #25	KIAA0513 (ENSBBBG00000007669) #26	CIBAR2 (ENSBBBG00000018537) #27	GINS2 (ENSBBBG00000008351) #29	C16orf74 (ENSBBBG00000018518) #30	EMC8 (ENSBBBG00000018504) #31	COX4I1 (ENSBBBG00000018492) #32	ENSBBBG00000018477 #33	ENSBBBG00000018474 #33	FOXF1 (ENSBBBG00000009137) #34	MTHFSD (ENSBBBG00000004524) #35	ENSBBBG00000018420 #36	FBXO31 (ENSBBBG00000018416)
Caprinae	ANCESTRAL SPECIES	4	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994.i #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.w #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Rambouillet Sheep	MODERN SPECIES	5	ENSOARG00020006229 #7	MLYCD (ENSOARG00020006248) #8	OSGIN1 (ENSOARG00020006281) #9	NECAB2 (ENSOARG00020006332) #10	SLC38A8 (ENSOARG00020006633) #11	MBTPS1 (ENSOARG00020006764) #12	HSDL1 (ENSOARG00020006986) #13	DNAAF1 (ENSOARG00020007051) #14	TAF1C (ENSOARG00020007383) #15	ADAD2 (ENSOARG00020007465) #16	ENSOARG00020007537 #17	WFDC1 (ENSOARG00020007552) #18	ATP2C2 (ENSOARG00020007591) #19	MEAK7 (ENSOARG00020007766) #20	COTL1 (ENSOARG00020007806) #21	KLHL36 (ENSOARG00020007848) #22	USP10 (ENSOARG00020007922) #23	ENSOARG00020008204	CRISPLD2 (ENSOARG00020008254) #24	ZDHHC7 (ENSOARG00020008568) #25	KIAA0513 (ENSOARG00020008594) #26	CIBAR2 (ENSOARG00020008666) #27	GSE1 (ENSOARG00020008756) #28	GINS2 (ENSOARG00020009486) #29	C16orf74 (ENSOARG00020009512) #30	EMC8 (ENSOARG00020009578) #31	COX4I1 (ENSOARG00020009649) #32	IRF8 (ENSOARG00020009703) #33	FOXF1 (ENSOARG00020009818) #34	ENSOARG00020009849 #35	FOXC2 (ENSOARG00020010027) #36
Goat	MODERN SPECIES	9	HSBP1 (ENSCHIG00000019904) #7	MLYCD (ENSCHIG00000009133) #8	OSGIN1 (ENSCHIG00000019419) #9	NECAB2 (ENSCHIG00000009472) #10	SLC38A8 (ENSCHIG00000023079) #11	MBTPS1 (ENSCHIG00000002168) #12	HSDL1 (ENSCHIG00000008948) #13	DNAAF1 (ENSCHIG00000007208) #14	TAF1C (ENSCHIG00000007997) #15	ADAD2 (ENSCHIG00000014498) #16	KCNG4 (ENSCHIG00000003069) #17	WFDC1 (ENSCHIG00000024511) #18	ATP2C2 (ENSCHIG00000012553) #19	MEAK7 (ENSCHIG00000022723) #20	COTL1 (ENSCHIG00000023708) #21	KLHL36 (ENSCHIG00000011329) #22	ENSCHIG00000025916 #23	CRISPLD2 (ENSCHIG00000024115) #24	ZDHHC7 (ENSCHIG00000009288) #25	KIAA0513 (ENSCHIG00000006583) #26	CIBAR2 (ENSCHIG00000015967) #27	GSE1 (ENSCHIG00000025163) #28	GINS2 (ENSCHIG00000016347) #29	C16orf74 (ENSCHIG00000021117) #30	ENSCHIG00000011295	EMC8 (ENSCHIG00000020765) #31	ENSCHIG00000012976 #32	IRF8 (ENSCHIG00000027216) #33	FOXF1 (ENSCHIG00000018868) #34	MTHFSD (ENSCHIG00000010977) #35	FOXC2 (ENSCHIG00000024950) #36
Siberian musk deer	MODERN SPECIES	1191	HSBP1 (ENSMMSG00000008024) #7	MLYCD (ENSMMSG00000008057) #8	OSGIN1 (ENSMMSG00000008088) #9	NECAB2 (ENSMMSG00000008132) #10	SLC38A8 (ENSMMSG00000008252) #11	MBTPS1 (ENSMMSG00000008323) #12	HSDL1 (ENSMMSG00000008380) #13	ENSMMSG00000008415 #14	TAF1C (ENSMMSG00000008444) #15	ADAD2 (ENSMMSG00000008481) #16	ENSMMSG00000008609 #17	WFDC1 (ENSMMSG00000008626) #18	ATP2C2 (ENSMMSG00000008658) #19	MEAK7 (ENSMMSG00000008702) #20	COTL1 (ENSMMSG00000008739) #21	KLHL36 (ENSMMSG00000008771) #22	USP10 (ENSMMSG00000008812) #23	CRISPLD2 (ENSMMSG00000008895) #24	ZDHHC7 (ENSMMSG00000008935) #25	KIAA0513 (ENSMMSG00000008978) #26	CIBAR2 (ENSMMSG00000009053) #27	GSE1 (ENSMMSG00000009112) #28	GINS2 (ENSMMSG00000009257) #29	EMC8 (ENSMMSG00000009365) #31	COX4I1 (ENSMMSG00000009407) #32	IRF8 (ENSMMSG00000009447) #33	FOXF1 (ENSMMSG00000009511) #34	MTHFSD (ENSMMSG00000009532) #35	FOXC2 (ENSMMSG00000009543) #36	ENSMMSG00000009558	FBXO31 (ENSMMSG00000009597)