Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000157543 #22
Gnathostomata	ANCESTRAL SPECIES	37		ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158070	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00390000002381.b	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000172426	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28	ENSGT00970000197463
Euteleostomi	ANCESTRAL SPECIES	21	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00940000166270	ENSGT00390000006293 #7	ENSGT00390000002381.b	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000172426	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Sarcopterygii	ANCESTRAL SPECIES	27	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00940000166270	ENSGT00390000006293 #7	ENSGT00390000002381.b	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000172426	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Tetrapoda	ANCESTRAL SPECIES	16	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00940000166270	ENSGT00390000006293 #7	ENSGT00390000002381.b	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000172426	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Amniota	ANCESTRAL SPECIES	25	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00940000166270	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000172426	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01030000235245	ENSGT00390000007838 #29
Mammalia	ANCESTRAL SPECIES	13	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00580000082227	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000164598	ENSGT00940000158140 #33	ENSGT00940000161035 #34
Theria	ANCESTRAL SPECIES	17	ENSGT00400000022168.b	ENSGT00440000033232.c	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00580000082227	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35
Eutheria	ANCESTRAL SPECIES	31	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00580000082227	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162251 #37
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00580000082227	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00580000082227	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00580000082227	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00990000211762	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00990000211762	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Pecora	ANCESTRAL SPECIES	4	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Percora_a	ANCESTRAL SPECIES	4	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Bovidae	ANCESTRAL SPECIES	4	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.w #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Bovinae	ANCESTRAL SPECIES	3	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.w #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Bos	ANCESTRAL SPECIES	4	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087.h #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.w #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Bos_a	ANCESTRAL SPECIES	22	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087.h #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.w #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Wild yak	MODERN SPECIES	489											ATP2C2 (ENSBMUG00000014549) #19	ENSBMUG00000014372 ##20	MEAK7 (ENSBMUG00000014359) #20	ENSBMUG00000014339	COTL1 (ENSBMUG00000014321) #21	KLHL36 (ENSBMUG00000014313) #22	USP10 (ENSBMUG00000014300) #23	CRISPLD2 (ENSBMUG00000014239) #24	ZDHHC7 (ENSBMUG00000014218) #25	KIAA0513 (ENSBMUG00000014185) #26	CIBAR2 (ENSBMUG00000014109) #27
Domestic yak	MODERN SPECIES	12	CDH13 (ENSBGRG00000018217)	HSBP1 (ENSBGRG00000018120) #7	MLYCD (ENSBGRG00000018041) #8	ENSBGRG00000017454 #10	SLC38A8 (ENSBGRG00000017192) #11	MBTPS1 (ENSBGRG00000016838) #12	HSDL1 (ENSBGRG00000016765) #13	ENSBGRG00000016699 #14	TAF1C (ENSBGRG00000016626) #15	ADAD2 (ENSBGRG00000016569) #16	KCNG4 (ENSBGRG00000016537) #17	WFDC1 (ENSBGRG00000016423) #18	ATP2C2 (ENSBGRG00000016156) #19	MEAK7 (ENSBGRG00000016002) #20	COTL1 (ENSBGRG00000015897) #21	KLHL36 (ENSBGRG00000015821) #22	USP10 (ENSBGRG00000015567) #23	CRISPLD2 (ENSBGRG00000015210) #24	ZDHHC7 (ENSBGRG00000015026) #25	KIAA0513 (ENSBGRG00000014870) #26	CIBAR2 (ENSBGRG00000014741) #27	GSE1 (ENSBGRG00000013990) #28	GINS2 (ENSBGRG00000013893) #29	ENSBGRG00000013747 #30	EMC8 (ENSBGRG00000013626) #31	ENSBGRG00000013514 #32	IRF8 (ENSBGRG00000013321) #33	FOXF1 (ENSBGRG00000013269) #34	MTHFSD (ENSBGRG00000013171) #35	FOXC2 (ENSBGRG00000013151) #36	ENSBGRG00000013135 #37
Bos_b	ANCESTRAL SPECIES		ENSGT00940000155218.B	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087.h #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.w #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Cow	MODERN SPECIES	9	CDH13 (ENSBTAG00000034373)	HSBP1 (ENSBTAG00000053436) #7	MLYCD (ENSBTAG00000004248) #8	OSGIN1 (ENSBTAG00000012508) #10	SLC38A8 (ENSBTAG00000040086) #11	MBTPS1 (ENSBTAG00000010170) #12	HSDL1 (ENSBTAG00000018770) #13	DNAAF1 (ENSBTAG00000018771) #14	TAF1C (ENSBTAG00000018772) #15	ADAD2 (ENSBTAG00000034283) #16	KCNG4 (ENSBTAG00000016695) #17	WFDC1 (ENSBTAG00000049788) #18	ATP2C2 (ENSBTAG00000000945) #19	MEAK7 (ENSBTAG00000000946) #20	COTL1 (ENSBTAG00000016315) #21	KLHL36 (ENSBTAG00000008385) #22	USP10 (ENSBTAG00000009446) #23	CRISPLD2 (ENSBTAG00000021176) #24	ZDHHC7 (ENSBTAG00000002639) #25	KIAA0513 (ENSBTAG00000020835) #26	CIBAR2 (ENSBTAG00000020836) #27	GSE1 (ENSBTAG00000009918) #28	GINS2 (ENSBTAG00000044006) #29	C18H16orf74 (ENSBTAG00000052744) #30	EMC8 (ENSBTAG00000016075) #31	COX4I1 (ENSBTAG00000016079) #32	IRF8 (ENSBTAG00000017824) #33	FOXF1 (ENSBTAG00000000009) #34	MTHFSD (ENSBTAG00000012446) #35	FOXC2 (ENSBTAG00000012465) #36	FOXL1 (ENSBTAG00000040605) #37
Hybrid Bos Indicus	MODERN SPECIES	9	CDH13 (ENSBIXG00005005903)	HSBP1 (ENSBIXG00005005940) #7	MLYCD (ENSBIXG00005006190) #8	ENSBIXG00005008933 #10	SLC38A8 (ENSBIXG00005008993) #11	MBTPS1 (ENSBIXG00005009072) #12	HSDL1 (ENSBIXG00005009109) #13	ENSBIXG00005000397 #14	TAF1C (ENSBIXG00005009142) #15	ADAD2 (ENSBIXG00005009226) #16	KCNG4 (ENSBIXG00005009246) #17	WFDC1 (ENSBIXG00005009273) #18	ATP2C2 (ENSBIXG00005000481) #19	MEAK7 (ENSBIXG00005009358) #20	ENSBIXG00005009383 #21	KLHL36 (ENSBIXG00005009403) #22	USP10 (ENSBIXG00005000501) #23	CRISPLD2 (ENSBIXG00005009518) #24	ENSBIXG00005009543	ZDHHC7 (ENSBIXG00005009575) #25	KIAA0513 (ENSBIXG00005005913) #26	CIBAR2 (ENSBIXG00005009663) #27	GSE1 (ENSBIXG00005009803) #28	GINS2 (ENSBIXG00005009840) #29	ENSBIXG00005000642 #30	EMC8 (ENSBIXG00005006101) #31	COX4I1 (ENSBIXG00005000673) #32	IRF8 (ENSBIXG00005000680) #33	FOXF1 (ENSBIXG00005009962) #34	MTHFSD (ENSBIXG00005000729) #35	FOXC2 (ENSBIXG00005009988) #36
American bison	MODERN SPECIES	3209	ENSBBBG00000018973 #9	ENSBBBG00000018968 #9	NECAB2 (ENSBBBG00000004817) #10	SLC38A8 (ENSBBBG00000018955) #11	MBTPS1 (ENSBBBG00000004806) #12	HSDL1 (ENSBBBG00000018926) #13	ENSBBBG00000009152 #14	ENSBBBG00000018906 #15	ENSBBBG00000004780 #15	ADAD2 (ENSBBBG00000018893) #16	ENSBBBG00000018855 #17	WFDC1 (ENSBBBG00000018848) #18	ATP2C2 (ENSBBBG00000018817) #19	MEAK7 (ENSBBBG00000018779) #20	COTL1 (ENSBBBG00000004684) #21	KLHL36 (ENSBBBG00000018733) #22	USP10 (ENSBBBG00000018715) #23	CRISPLD2 (ENSBBBG00000018674) #24	ZDHHC7 (ENSBBBG00000004615) #25	KIAA0513 (ENSBBBG00000007669) #26	CIBAR2 (ENSBBBG00000018537) #27	GINS2 (ENSBBBG00000008351) #29	C16orf74 (ENSBBBG00000018518) #30	EMC8 (ENSBBBG00000018504) #31	COX4I1 (ENSBBBG00000018492) #32	ENSBBBG00000018477 #33	ENSBBBG00000018474 #33	FOXF1 (ENSBBBG00000009137) #34	MTHFSD (ENSBBBG00000004524) #35	ENSBBBG00000018420 #36	FBXO31 (ENSBBBG00000018416)
Caprinae	ANCESTRAL SPECIES	4	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994.i #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.w #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Rambouillet Sheep	MODERN SPECIES	5	ENSOARG00020006229 #7	MLYCD (ENSOARG00020006248) #8	OSGIN1 (ENSOARG00020006281) #9	NECAB2 (ENSOARG00020006332) #10	SLC38A8 (ENSOARG00020006633) #11	MBTPS1 (ENSOARG00020006764) #12	HSDL1 (ENSOARG00020006986) #13	DNAAF1 (ENSOARG00020007051) #14	TAF1C (ENSOARG00020007383) #15	ADAD2 (ENSOARG00020007465) #16	ENSOARG00020007537 #17	WFDC1 (ENSOARG00020007552) #18	ATP2C2 (ENSOARG00020007591) #19	MEAK7 (ENSOARG00020007766) #20	COTL1 (ENSOARG00020007806) #21	KLHL36 (ENSOARG00020007848) #22	USP10 (ENSOARG00020007922) #23	ENSOARG00020008204	CRISPLD2 (ENSOARG00020008254) #24	ZDHHC7 (ENSOARG00020008568) #25	KIAA0513 (ENSOARG00020008594) #26	CIBAR2 (ENSOARG00020008666) #27	GSE1 (ENSOARG00020008756) #28	GINS2 (ENSOARG00020009486) #29	C16orf74 (ENSOARG00020009512) #30	EMC8 (ENSOARG00020009578) #31	COX4I1 (ENSOARG00020009649) #32	IRF8 (ENSOARG00020009703) #33	FOXF1 (ENSOARG00020009818) #34	ENSOARG00020009849 #35	FOXC2 (ENSOARG00020010027) #36
Goat	MODERN SPECIES	9	HSBP1 (ENSCHIG00000019904) #7	MLYCD (ENSCHIG00000009133) #8	OSGIN1 (ENSCHIG00000019419) #9	NECAB2 (ENSCHIG00000009472) #10	SLC38A8 (ENSCHIG00000023079) #11	MBTPS1 (ENSCHIG00000002168) #12	HSDL1 (ENSCHIG00000008948) #13	DNAAF1 (ENSCHIG00000007208) #14	TAF1C (ENSCHIG00000007997) #15	ADAD2 (ENSCHIG00000014498) #16	KCNG4 (ENSCHIG00000003069) #17	WFDC1 (ENSCHIG00000024511) #18	ATP2C2 (ENSCHIG00000012553) #19	MEAK7 (ENSCHIG00000022723) #20	COTL1 (ENSCHIG00000023708) #21	KLHL36 (ENSCHIG00000011329) #22	ENSCHIG00000025916 #23	CRISPLD2 (ENSCHIG00000024115) #24	ZDHHC7 (ENSCHIG00000009288) #25	KIAA0513 (ENSCHIG00000006583) #26	CIBAR2 (ENSCHIG00000015967) #27	GSE1 (ENSCHIG00000025163) #28	GINS2 (ENSCHIG00000016347) #29	C16orf74 (ENSCHIG00000021117) #30	ENSCHIG00000011295	EMC8 (ENSCHIG00000020765) #31	ENSCHIG00000012976 #32	IRF8 (ENSCHIG00000027216) #33	FOXF1 (ENSCHIG00000018868) #34	MTHFSD (ENSCHIG00000010977) #35	FOXC2 (ENSCHIG00000024950) #36
Siberian musk deer	MODERN SPECIES	1191	HSBP1 (ENSMMSG00000008024) #7	MLYCD (ENSMMSG00000008057) #8	OSGIN1 (ENSMMSG00000008088) #9	NECAB2 (ENSMMSG00000008132) #10	SLC38A8 (ENSMMSG00000008252) #11	MBTPS1 (ENSMMSG00000008323) #12	HSDL1 (ENSMMSG00000008380) #13	ENSMMSG00000008415 #14	TAF1C (ENSMMSG00000008444) #15	ADAD2 (ENSMMSG00000008481) #16	ENSMMSG00000008609 #17	WFDC1 (ENSMMSG00000008626) #18	ATP2C2 (ENSMMSG00000008658) #19	MEAK7 (ENSMMSG00000008702) #20	COTL1 (ENSMMSG00000008739) #21	KLHL36 (ENSMMSG00000008771) #22	USP10 (ENSMMSG00000008812) #23	CRISPLD2 (ENSMMSG00000008895) #24	ZDHHC7 (ENSMMSG00000008935) #25	KIAA0513 (ENSMMSG00000008978) #26	CIBAR2 (ENSMMSG00000009053) #27	GSE1 (ENSMMSG00000009112) #28	GINS2 (ENSMMSG00000009257) #29	EMC8 (ENSMMSG00000009365) #31	COX4I1 (ENSMMSG00000009407) #32	IRF8 (ENSMMSG00000009447) #33	FOXF1 (ENSMMSG00000009511) #34	MTHFSD (ENSMMSG00000009532) #35	FOXC2 (ENSMMSG00000009543) #36	ENSMMSG00000009558	FBXO31 (ENSMMSG00000009597)
Yarkand deer	MODERN SPECIES	27	HSBP1 (ENSCHYG00000001187) #7	MLYCD (ENSCHYG00000001202) #8	OSGIN1 (ENSCHYG00000001212) #9	NECAB2 (ENSCHYG00000001255) #10	SLC38A8 (ENSCHYG00000001331) #11	MBTPS1 (ENSCHYG00000001353) #12	HSDL1 (ENSCHYG00000001388) #13	DNAAF1 (ENSCHYG00000001408) #14	TAF1C (ENSCHYG00000001449) #15	ADAD2 (ENSCHYG00000001486) #16	KCNG4 (ENSCHYG00000001503) #17	WFDC1 (ENSCHYG00000001522) #18	ATP2C2 (ENSCHYG00000001572) #19	MEAK7 (ENSCHYG00000001695) #20	COTL1 (ENSCHYG00000001721) #21	KLHL36 (ENSCHYG00000001747) #22	USP10 (ENSCHYG00000001782) #23	CRISPLD2 (ENSCHYG00000001868) #24	ENSCHYG00000001909	ZDHHC7 (ENSCHYG00000001925) #25	KIAA0513 (ENSCHYG00000001960) #26	CIBAR2 (ENSCHYG00000002010) #27	GSE1 (ENSCHYG00000002083) #28	GINS2 (ENSCHYG00000002249) #29	C16orf74 (ENSCHYG00000002276) #30	EMC8 (ENSCHYG00000002299) #31	ENSCHYG00000002320 #32	IRF8 (ENSCHYG00000002350) #33	FOXF1 (ENSCHYG00000002390) #34	MTHFSD (ENSCHYG00000002403) #35	FOXC2 (ENSCHYG00000002422) #36
Cetacea	ANCESTRAL SPECIES	6	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Narwhal	MODERN SPECIES	296	HSBP1 (ENSMMNG00015002935) #7	MLYCD (ENSMMNG00015002914) #8	OSGIN1 (ENSMMNG00015002851) #9	NECAB2 (ENSMMNG00015002809) #10	SLC38A8 (ENSMMNG00015002774) #11	MBTPS1 (ENSMMNG00015002703) #12	HSDL1 (ENSMMNG00015002679) #13	ENSMMNG00015002667 #14	TAF1C (ENSMMNG00015002638) #15	ADAD2 (ENSMMNG00015002612) #16	ENSMMNG00015002595 #17	WFDC1 (ENSMMNG00015002575) #18	ATP2C2 (ENSMMNG00015002523) #19	MEAK7 (ENSMMNG00015002490) #20	COTL1 (ENSMMNG00015002467) #21	KLHL36 (ENSMMNG00015002440) #22	USP10 (ENSMMNG00015002409) #23	CRISPLD2 (ENSMMNG00015002363) #24	ZDHHC7 (ENSMMNG00015002317) #25	KIAA0513 (ENSMMNG00015002273) #26	CIBAR2 (ENSMMNG00015002218) #27	GSE1 (ENSMMNG00015002100) #28	GINS2 (ENSMMNG00015002044) #29	C16orf74 (ENSMMNG00015002025) #30	EMC8 (ENSMMNG00015002000) #31	COX4I1 (ENSMMNG00015001973) #32	IRF8 (ENSMMNG00015001938) #33	FOXF1 (ENSMMNG00015001918) #34	ENSMMNG00015001903 #35	ENSMMNG00015001883 #35	FOXC2 (ENSMMNG00015001866) #36
Beluga whale	MODERN SPECIES	12	CDH13 (ENSDLEG00000001760)	MLYCD (ENSDLEG00000001753) #8	OSGIN1 (ENSDLEG00000001743) #9	NECAB2 (ENSDLEG00000001725) #10	SLC38A8 (ENSDLEG00000001712) #11	MBTPS1 (ENSDLEG00000001673) #12	HSDL1 (ENSDLEG00000001650) #13	DNAAF1 (ENSDLEG00000001624) #14	TAF1C (ENSDLEG00000001592) #15	ADAD2 (ENSDLEG00000001541) #16	KCNG4 (ENSDLEG00000001525) #17	WFDC1 (ENSDLEG00000001511) #18	ATP2C2 (ENSDLEG00000001059) #19	TLDC1 (ENSDLEG00000000877) #20	COTL1 (ENSDLEG00000000857) #21	KLHL36 (ENSDLEG00000000834) #22	USP10 (ENSDLEG00000000628) #23	CRISPLD2 (ENSDLEG00000000525) #24	ZDHHC7 (ENSDLEG00000000499) #25	KIAA0513 (ENSDLEG00000000452) #26	ENSDLEG00000000422 #27	ENSDLEG00000000399 #27	GSE1 (ENSDLEG00000000266) #28	GINS2 (ENSDLEG00000000195) #29	CUNH16orf74 (ENSDLEG00000000177) #30	EMC8 (ENSDLEG00000000159) #31	COX4I1 (ENSDLEG00000000098) #32	IRF8 (ENSDLEG00000000063) #33	FOXF1 (ENSDLEG00000000049) #34	MTHFSD (ENSDLEG00000003253) #35	FOXC2 (ENSDLEG00000003250) #36
Vaquita	MODERN SPECIES	10	HSBP1 (ENSPSNG00000018883) #7	MLYCD (ENSPSNG00000018921) #8	OSGIN1 (ENSPSNG00000018976) #9	NECAB2 (ENSPSNG00000019029) #10	SLC38A8 (ENSPSNG00000019267) #11	MBTPS1 (ENSPSNG00000019360) #12	HSDL1 (ENSPSNG00000019399) #13	ENSPSNG00000019431 #14	TAF1C (ENSPSNG00000019487) #15	ADAD2 (ENSPSNG00000019565) #16	ENSPSNG00000019691 #17	WFDC1 (ENSPSNG00000019707) #18	ATP2C2 (ENSPSNG00000019806) #19	MEAK7 (ENSPSNG00000019970) #20	COTL1 (ENSPSNG00000020002) #21	KLHL36 (ENSPSNG00000020049) #22	USP10 (ENSPSNG00000020104) #23	CRISPLD2 (ENSPSNG00000020208) #24	ZDHHC7 (ENSPSNG00000020269) #25	KIAA0513 (ENSPSNG00000020345) #26	CIBAR2 (ENSPSNG00000020425) #27	GSE1 (ENSPSNG00000020556) #28	GINS2 (ENSPSNG00000020636) #29	ENSPSNG00000020667	EMC8 (ENSPSNG00000020702) #31	COX4I1 (ENSPSNG00000020743) #32	IRF8 (ENSPSNG00000020794) #33	FOXF1 (ENSPSNG00000020873) #34	MTHFSD (ENSPSNG00000020898) #35	FOXC2 (ENSPSNG00000020926) #36	FBXO31 (ENSPSNG00000021103)
Dolphin	MODERN SPECIES	450																KLHL36 (ENSTTRG00000012000) #22	USP10 (ENSTTRG00000012001) #23
Sperm whale	MODERN SPECIES	8	SDR42E1 (ENSPCTG00005017582)	HSD17B2 (ENSPCTG00005017614)	MPHOSPH6 (ENSPCTG00005017703)	CDH13 (ENSPCTG00005017798)	HSBP1 (ENSPCTG00005018092) #7	ENSPCTG00005018157 #12	OSGIN1 (ENSPCTG00005018585) #9	ENSPCTG00005018655 #10	DNAAF1 (ENSPCTG00005018707) #14	ENSPCTG00005018799 #15	ADAD2 (ENSPCTG00005018834) #16	ENSPCTG00005018934 #17	WFDC1 (ENSPCTG00005018951) #18	ATP2C2 (ENSPCTG00005018988) #19	MEAK7 (ENSPCTG00005019208) #20	KLHL36 (ENSPCTG00005019290) #22	USP10 (ENSPCTG00005004306) #23	CRISPLD2 (ENSPCTG00005004381) #24	ZDHHC7 (ENSPCTG00005004415) #25	KIAA0513 (ENSPCTG00005004437) #26	GSE1 (ENSPCTG00005004462) #28	GINS2 (ENSPCTG00005004524) #29	C17H16orf74 (ENSPCTG00005004548) #30	COX4I1 (ENSPCTG00005004571) #32	ENSPCTG00005004595	ENSPCTG00005004616 #33	ENSPCTG00005004634 #33	FOXF1 (ENSPCTG00005004653) #34	MTHFSD (ENSPCTG00005004669) #35	FOXC2 (ENSPCTG00005004692) #36	FOXL1 (ENSPCTG00005004701) #37
Blue whale	MODERN SPECIES	10	MLYCD (ENSBMSG00010016323) #8	ENSBMSG00010016347 #9	NECAB2 (ENSBMSG00010016382) #10	SLC38A8 (ENSBMSG00010016481) #11	MBTPS1 (ENSBMSG00010016533) #12	HSDL1 (ENSBMSG00010016575) #13	ENSBMSG00010016603 #14	TAF1C (ENSBMSG00010016644) #15	ADAD2 (ENSBMSG00010016696) #16	ENSBMSG00010016754 #17	WFDC1 (ENSBMSG00010016768) #18	ATP2C2 (ENSBMSG00010016874) #19	MEAK7 (ENSBMSG00010017185) #20	ENSBMSG00010017210	COTL1 (ENSBMSG00010017225) #21	KLHL36 (ENSBMSG00010017262) #22	USP10 (ENSBMSG00010017306) #23	CRISPLD2 (ENSBMSG00010017381) #24	ENSBMSG00010017407 #25	KIAA0513 (ENSBMSG00010017475) #26	CIBAR2 (ENSBMSG00010017523) #27	GSE1 (ENSBMSG00010017568) #28	GINS2 (ENSBMSG00010017702) #29	EMC8 (ENSBMSG00010017742) #31	COX4I1 (ENSBMSG00010017804) #32	ENSBMSG00010017833 #33	ENSBMSG00010017854 #33	FOXF1 (ENSBMSG00010017875) #34	ENSBMSG00010017893 #35	ENSBMSG00010017911 #35	FOXC2 (ENSBMSG00010017944) #36
Camelidae	ANCESTRAL SPECIES	9	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00990000211762	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25
Arabian camel	MODERN SPECIES	35	OSGIN1 (ENSCDRG00005001288) #9	NECAB2 (ENSCDRG00005001312) #10	SLC38A8 (ENSCDRG00005001379) #11	MBTPS1 (ENSCDRG00005001411) #12	HSDL1 (ENSCDRG00005001452) #13	DNAAF1 (ENSCDRG00005001473) #14	TAF1C (ENSCDRG00005001497) #15	ADAD2 (ENSCDRG00005001513) #16	ENSCDRG00005001533	KCNG4 (ENSCDRG00005001544) #17	WFDC1 (ENSCDRG00005001559) #18	ATP2C2 (ENSCDRG00005001592) #19	MEAK7 (ENSCDRG00005001698) #20	ENSCDRG00005001718	COTL1 (ENSCDRG00005001729) #21	KLHL36 (ENSCDRG00005001746) #22	USP10 (ENSCDRG00005001768) #23	CRISPLD2 (ENSCDRG00005001807) #24	ZDHHC7 (ENSCDRG00005001833) #25	PRKAB2 (ENSCDRG00005001847)	ENSCDRG00005001864	PDE4DIP (ENSCDRG00005001996)	SEC22B (ENSCDRG00005002623)	NOTCH2 (ENSCDRG00005002643)	ENSCDRG00005002687	ENSCDRG00005002701	REG4 (ENSCDRG00005002721)	HMGCS2 (ENSCDRG00005002749)	PHGDH (ENSCDRG00005002792)	ZNF697 (ENSCDRG00005002866)	ENSCDRG00005002880
Alpaca	MODERN SPECIES	564																KLHL36 (ENSVPAG00000007602) #22
Suina	ANCESTRAL SPECIES	36	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00990000211762	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Pig	MODERN SPECIES	14	CDH13 (ENSSSCG00000002684)	HSBP1 (ENSSSCG00000057749) #7	MLYCD (ENSSSCG00000031450) #8	OSGIN1 (ENSSSCG00000032115) #9	SLC38A8 (ENSSSCG00000039218) #11	MBTPS1 (ENSSSCG00000002682) #12	HSDL1 (ENSSSCG00000002681) #13	DNAAF1 (ENSSSCG00000002675) #14	TAF1C (ENSSSCG00000002680) #15	ADAD2 (ENSSSCG00000034385) #16	KCNG4 (ENSSSCG00000060235) #17	WFDC1 (ENSSSCG00000023837) #18	ATP2C2 (ENSSSCG00000002671) #19	MEAK7 (ENSSSCG00000002672) #20	COTL1 (ENSSSCG00000037645) #21	KLHL36 (ENSSSCG00000038285) #22	USP10 (ENSSSCG00000002670) #23	CRISPLD2 (ENSSSCG00000002669) #24	ZDHHC7 (ENSSSCG00000002667) #25	KIAA0513 (ENSSSCG00000002666) #26	CIBAR2 (ENSSSCG00000002668) #27	GSE1 (ENSSSCG00000002664) #28	GINS2 (ENSSSCG00000056302) #29	C16orf74 (ENSSSCG00000059578) #30	ENSSSCG00000045808 #31	COX4I1 (ENSSSCG00000029034) #32	IRF8 (ENSSSCG00000034980) #33	FOXF1 (ENSSSCG00000038460) #34	MTHFSD (ENSSSCG00000002660) #35	FOXC2 (ENSSSCG00000029296) #36	FOXL1 (ENSSSCG00000002658) #37
Chacoan peccary	MODERN SPECIES	10	OSGIN1 (ENSCWAG00000004417) #9	NECAB2 (ENSCWAG00000004455) #10	SLC38A8 (ENSCWAG00000004623) #11	MBTPS1 (ENSCWAG00000007673) #12	HSDL1 (ENSCWAG00000007716) #13	DNAAF1 (ENSCWAG00000007738) #14	TAF1C (ENSCWAG00000007882) #15	ADAD2 (ENSCWAG00000007915) #16	ENSCWAG00000008040	ENSCWAG00000008083 #17	WFDC1 (ENSCWAG00000008104) #18	ATP2C2 (ENSCWAG00000008220) #19	MEAK7 (ENSCWAG00000008468) #20	ENSCWAG00000008539	COTL1 (ENSCWAG00000008576) #21	KLHL36 (ENSCWAG00000008645) #22	USP10 (ENSCWAG00000008734) #23	CRISPLD2 (ENSCWAG00000008857) #24	ZDHHC7 (ENSCWAG00000008938) #25	KIAA0513 (ENSCWAG00000008991) #26	CIBAR2 (ENSCWAG00000009068) #27
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00580000082227	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Carnivora	ANCESTRAL SPECIES	2	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00580000082227	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Felidae	ANCESTRAL SPECIES	7	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Panthera	ANCESTRAL SPECIES	10	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Tiger	MODERN SPECIES	176	HSD17B2 (ENSPTIG00000005395)	MPHOSPH6 (ENSPTIG00000000518)	CDH13 (ENSPTIG00000019366)	HSBP1 (ENSPTIG00000018555) #7	MLYCD (ENSPTIG00000018312) #8	OSGIN1 (ENSPTIG00000016465) #9	NECAB2 (ENSPTIG00000015250) #10	SLC38A8 (ENSPTIG00000014053) #11	MBTPS1 (ENSPTIG00000009246) #12	HSDL1 (ENSPTIG00000005993) #13	DNAAF1 (ENSPTIG00000001632) #14	ENSPTIG00000019244 #15	ATP2C2 (ENSPTIG00000016600) #19	MEAK7 (ENSPTIG00000016108) #20	COTL1 (ENSPTIG00000015903) #21	KLHL36 (ENSPTIG00000014929) #22	USP10 (ENSPTIG00000012919) #23	CRISPLD2 (ENSPTIG00000005240) #24	ZDHHC7 (ENSPTIG00000002121) #25	KIAA0513 (ENSPTIG00000020445) #26	GINS2 (ENSPTIG00000020197) #29	ENSPTIG00000020016	ENSPTIG00000019814	EMC8 (ENSPTIG00000019682) #31	COX4I1 (ENSPTIG00000018967) #32	ENSPTIG00000018645 #33	FOXF1 (ENSPTIG00000018017) #34	ENSPTIG00000017567 #35	FBXO31 (ENSPTIG00000017229)	ENSPTIG00000016952	ENSPTIG00000016365
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
lion	MODERN SPECIES	15	HSBP1 (ENSPLOG00000020851) #7	MLYCD (ENSPLOG00000020875) #8	OSGIN1 (ENSPLOG00000020893) #9	NECAB2 (ENSPLOG00000020932) #10	SLC38A8 (ENSPLOG00000021052) #11	MBTPS1 (ENSPLOG00000021100) #12	HSDL1 (ENSPLOG00000021130) #13	DNAAF1 (ENSPLOG00000005449) #14	TAF1C (ENSPLOG00000005565) #15	ADAD2 (ENSPLOG00000005832) #16	KCNG4 (ENSPLOG00000005868) #17	WFDC1 (ENSPLOG00000005977) #18	ENSPLOG00000006012 #19	MEAK7 (ENSPLOG00000006058) #20	COTL1 (ENSPLOG00000006162) #21	KLHL36 (ENSPLOG00000006204) #22	USP10 (ENSPLOG00000006249) #23	CRISPLD2 (ENSPLOG00000006321) #24	ZDHHC7 (ENSPLOG00000006447) #25	KIAA0513 (ENSPLOG00000006501) #26	CIBAR2 (ENSPLOG00000006577) #27	GSE1 (ENSPLOG00000006716) #28	GINS2 (ENSPLOG00000006957) #29	C16orf74 (ENSPLOG00000006979) #30	EMC8 (ENSPLOG00000007073) #31	COX4I1 (ENSPLOG00000007101) #32	IRF8 (ENSPLOG00000007128) #33	FOXF1 (ENSPLOG00000007159) #34	MTHFSD (ENSPLOG00000007178) #35	ENSPLOG00000007206 #35	FOXC2 (ENSPLOG00000007240) #36
leopard	MODERN SPECIES	60	HSBP1 (ENSPPRG00000022445) #7	MLYCD (ENSPPRG00000025085) #8	OSGIN1 (ENSPPRG00000025067) #9	NECAB2 (ENSPPRG00000025055) #10	SLC38A8 (ENSPPRG00000025007) #11	MBTPS1 (ENSPPRG00000024918) #12	HSDL1 (ENSPPRG00000024798) #13	DNAAF1 (ENSPPRG00000024628) #14	TAF1C (ENSPPRG00000023445) #15	ADAD2 (ENSPPRG00000000054) #16	KCNG4 (ENSPPRG00000000151) #17	WFDC1 (ENSPPRG00000000458) #18	ATP2C2 (ENSPPRG00000005160) #19	MEAK7 (ENSPPRG00000005574) #20	COTL1 (ENSPPRG00000005657) #21	KLHL36 (ENSPPRG00000006076) #22	USP10 (ENSPPRG00000007182) #23	ENSPPRG00000007324 #24	ZDHHC7 (ENSPPRG00000008164) #25	KIAA0513 (ENSPPRG00000009019) #26	CIBAR2 (ENSPPRG00000009612) #27	GSE1 (ENSPPRG00000017749) #28	GINS2 (ENSPPRG00000022059) #29	ENSPPRG00000024649	EMC8 (ENSPPRG00000024408) #31	ENSPPRG00000024103 #32	IRF8 (ENSPPRG00000023576) #33	FOXF1 (ENSPPRG00000023418) #34	MTHFSD (ENSPPRG00000023220) #35	FOXC2 (ENSPPRG00000023064) #36	FBXO31 (ENSPPRG00000022691)
Cat	MODERN SPECIES	246	CDH13 (ENSFCAG00000004387)	ENSFCAG00000047154	HSBP1 (ENSFCAG00000034194) #7	MLYCD (ENSFCAG00000011551) #8	NECAB2 (ENSFCAG00000026632) #10	MBTPS1 (ENSFCAG00000011554) #12	HSDL1 (ENSFCAG00000027235) #13	DNAAF1 (ENSFCAG00000011556) #14	TAF1C (ENSFCAG00000011557) #15	ADAD2 (ENSFCAG00000030183) #16	KCNG4 (ENSFCAG00000011558) #17	WFDC1 (ENSFCAG00000023751) #18	ATP2C2 (ENSFCAG00000011748) #19	MEAK7 (ENSFCAG00000011749) #20	ENSFCAG00000043033 #21	KLHL36 (ENSFCAG00000010830) #22	USP10 (ENSFCAG00000010831) #23	CRISPLD2 (ENSFCAG00000010832) #24	ENSFCAG00000050674	ZDHHC7 (ENSFCAG00000021957) #25	KIAA0513 (ENSFCAG00000006136) #26	CIBAR2 (ENSFCAG00000030210) #27	GSE1 (ENSFCAG00000007608) #28	GINS2 (ENSFCAG00000007610) #29	C16orf74 (ENSFCAG00000037070) #30	EMC8 (ENSFCAG00000045006) #31	COX4I1 (ENSFCAG00000045400) #32	IRF8 (ENSFCAG00000046322) #33	FOXF1 (ENSFCAG00000030557) #34	MTHFSD (ENSFCAG00000023656) #35	FOXC2 (ENSFCAG00000045920) #36
Caniformia	ANCESTRAL SPECIES	1	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00580000082227	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00580000082227	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Ursidae	ANCESTRAL SPECIES	8	ENSGT00390000006293.eb #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Ursus	ANCESTRAL SPECIES	26	ENSGT00950000183118.B	ENSGT00390000013367	ENSGT00940000156041	ENSGT00940000154688.b	ENSGT00940000159061	ENSGT00390000009505	ENSGT00940000160007	ENSGT00390000007370	ENSGT00390000007315	ENSGT00940000161310	ENSGT00390000001014.d	ENSGT00940000161356	ENSGT00390000010067.g	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
American black bear	MODERN SPECIES	247												VSTM2B (ENSUAMG00000003044)	ENSUAMG00000003049	MEAK7 (ENSUAMG00000003052) #20	COTL1 (ENSUAMG00000003058) #21	KLHL36 (ENSUAMG00000003060) #22	USP10 (ENSUAMG00000003075) #23	CRISPLD2 (ENSUAMG00000003453) #24	ZDHHC7 (ENSUAMG00000003464) #25	KIAA0513 (ENSUAMG00000003468) #26
Polar bear	MODERN SPECIES	246	ABCC12 (ENSUMAG00000007107)	PHKB (ENSUMAG00000007207)	ITFG1 (ENSUMAG00000007275)	NETO2 (ENSUMAG00000007445)	DNAJA2 (ENSUMAG00000007456)	GPT2 (ENSUMAG00000007464)	C16orf87 (ENSUMAG00000007482)	MYLK3 (ENSUMAG00000007489)	ORC6 (ENSUMAG00000007497)	VPS35 (ENSUMAG00000007502)	SHCBP1 (ENSUMAG00000007514)	UQCRFS1 (ENSUMAG00000007517)	ENSUMAG00000007522	MEAK7 (ENSUMAG00000007524) #20	COTL1 (ENSUMAG00000007526) #21	KLHL36 (ENSUMAG00000007528) #22	USP10 (ENSUMAG00000007552) #23	CRISPLD2 (ENSUMAG00000007624) #24	ZDHHC7 (ENSUMAG00000007637) #25	KIAA0513 (ENSUMAG00000007640) #26	CIBAR2 (ENSUMAG00000007644) #27	GSE1 (ENSUMAG00000007674) #28	GINS2 (ENSUMAG00000007686) #29	C16orf74 (ENSUMAG00000007695) #30	EMC8 (ENSUMAG00000007707) #31	COX4I1 (ENSUMAG00000007719) #32	ENSUMAG00000007722 #33	ENSUMAG00000007723 #33	FOXF1 (ENSUMAG00000007732) #34	MTHFSD (ENSUMAG00000007740) #35	FOXL1 (ENSUMAG00000007747) #37
Giant Panda	MODERN SPECIES	3	MPHOSPH6 (ENSAMEG00000014150)	CDH13 (ENSAMEG00000006487)	HSBP1 (ENSAMEG00000006485) #7	MLYCD (ENSAMEG00000027054) #8	NECAB2 (ENSAMEG00000006457) #10	SLC38A8 (ENSAMEG00000006433) #11	MBTPS1 (ENSAMEG00000006349) #12	HSDL1 (ENSAMEG00000006337) #13	DNAAF1 (ENSAMEG00000006296) #14	TAF1C (ENSAMEG00000006277) #15	ADAD2 (ENSAMEG00000006263) #16	KCNG4 (ENSAMEG00000006259) #17	WFDC1 (ENSAMEG00000006256) #18	ATP2C2 (ENSAMEG00000006155) #19	COTL1 (ENSAMEG00000024628) #21	KLHL36 (ENSAMEG00000018309) #22	USP10 (ENSAMEG00000018303) #23	CRISPLD2 (ENSAMEG00000018298) #24	ZDHHC7 (ENSAMEG00000018295) #25	KIAA0513 (ENSAMEG00000018290) #26	CIBAR2 (ENSAMEG00000018288) #27	GSE1 (ENSAMEG00000018284) #28	GINS2 (ENSAMEG00000018281) #29	C16orf74 (ENSAMEG00000018280) #30	EMC8 (ENSAMEG00000018276) #31	ENSAMEG00000018274 #32	IRF8 (ENSAMEG00000024285) #33	FOXF1 (ENSAMEG00000018266) #34	MTHFSD (ENSAMEG00000018265) #35	FOXC2 (ENSAMEG00000026760) #36	FOXL1 (ENSAMEG00000019188) #37
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00580000082227	ENSGT00700000104539.b.a #28	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
American mink	MODERN SPECIES	98				ENSNVIG00000005953	ZNF608 (ENSNVIG00000005964)	ENSNVIG00000005990	ENSNVIG00000005998	ENSNVIG00000006002	GRAMD2B (ENSNVIG00000006035)	ALDH7A1 (ENSNVIG00000006240)	PHAX (ENSNVIG00000007225)	TEX43 (ENSNVIG00000007230)	DDX41 (ENSNVIG00000007244)	FAM193B (ENSNVIG00000007270)	ENSNVIG00000007295	KLHL36 (ENSNVIG00000007304) #22	USP10 (ENSNVIG00000007318) #23	CRISPLD2 (ENSNVIG00000007359) #24	ZDHC7 (ENSNVIG00000007462) #25	K0513 (ENSNVIG00000007482) #26	CIBAR2 (ENSNVIG00000007565) #27	GSE1 (ENSNVIG00000007606) #28	C16orf74 (ENSNVIG00000007837) #30	EMC8 (ENSNVIG00000007851) #31	COX4I1 (ENSNVIG00000007871) #32	IRF8 (ENSNVIG00000007895) #33	FOXF1 (ENSNVIG00000007927) #34	MTHFSD (ENSNVIG00000007938) #35	FOXC2 (ENSNVIG00000007959) #36	FOXL1 (ENSNVIG00000007968) #37	FBXO31 (ENSNVIG00000008017)
Ferret	MODERN SPECIES	203	OSGIN1 (ENSMPUG00000009146) #9	NECAB2 (ENSMPUG00000009022) #10	SLC38A8 (ENSMPUG00000008965) #11	MBTPS1 (ENSMPUG00000008948) #12	HSDL1 (ENSMPUG00000008941) #13	DNAAF1 (ENSMPUG00000008924) #14	TAF1C (ENSMPUG00000008913) #15	ADAD2 (ENSMPUG00000008901) #16	ENSMPUG00000008894	KCNG4 (ENSMPUG00000008885) #17	WFDC1 (ENSMPUG00000008876) #18	ENSMPUG00000020011	ATP2C2 (ENSMPUG00000008862) #19	MEAK7 (ENSMPUG00000008854) #20	COTL1 (ENSMPUG00000008826) #21	KLHL36 (ENSMPUG00000008815) #22	USP10 (ENSMPUG00000008738) #23	CRISPLD2 (ENSMPUG00000008726) #24	ZDHHC7 (ENSMPUG00000008719) #25	KIAA0513 (ENSMPUG00000008710) #26	CIBAR2 (ENSMPUG00000008680) #27	ENSMPUG00000008676	ENSMPUG00000008671	ENSMPUG00000008666	GSE1 (ENSMPUG00000008651) #28	EMC8 (ENSMPUG00000008644) #31	IRF8 (ENSMPUG00000008641) #33	ENSMPUG00000008635	ENSMPUG00000008630	ENSMPUG00000008626	FOXF1 (ENSMPUG00000008619) #34
Canidae	ANCESTRAL SPECIES	11	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Dingo	MODERN SPECIES	373	HSBP1 (ENSCAFG00020003283) #7	MLYCD (ENSCAFG00020003288) #8	OSGIN1 (ENSCAFG00020003290) #9	NECAB2 (ENSCAFG00020003293) #10	SLC38A8 (ENSCAFG00020003299) #11	MBTPS1 (ENSCAFG00020003314) #12	HSDL1 (ENSCAFG00020003324) #13	ENSCAFG00020003334 #14	TAF1C (ENSCAFG00020003344) #15	ADAD2 (ENSCAFG00020003352) #16	KCNG4 (ENSCAFG00020003370) #17	WFDC1 (ENSCAFG00020003376) #18	ATP2C2 (ENSCAFG00020003435) #19	MEAK7 (ENSCAFG00020003989) #20	COTL1 (ENSCAFG00020003997) #21	KLHL36 (ENSCAFG00020004009) #22	USP10 (ENSCAFG00020004033) #23	CRISPLD2 (ENSCAFG00020004050) #24	ZDHHC7 (ENSCAFG00020004061) #25	KIAA0513 (ENSCAFG00020004099) #26	CIBAR2 (ENSCAFG00020004114) #27	GSE1 (ENSCAFG00020004155) #28	GINS2 (ENSCAFG00020004171) #29	ENSCAFG00020004197 #30	ENSCAFG00020004199 #31	COX4I1 (ENSCAFG00020004200) #32	IRF8 (ENSCAFG00020004206) #33	FOXF1 (ENSCAFG00020004287) #34	ENSCAFG00020004291 #35	ENSCAFG00020004294 #35	FOXC2 (ENSCAFG00020004304) #36
Dog	MODERN SPECIES	33	MLYCD (ENSCAFG00845016601) #8	OSGIN1 (ENSCAFG00845016421) #9	NECAB2 (ENSCAFG00845016292) #10	SLC38A8 (ENSCAFG00845016204) #11	MBTPS1 (ENSCAFG00845016031) #12	HSDL1 (ENSCAFG00845015934) #13	DNAAF1 (ENSCAFG00845015871) #14	TAF1C (ENSCAFG00845015822) #15	ENSCAFG00845015763 #15	ADAD2 (ENSCAFG00845004773) #16	KCNG4 (ENSCAFG00845004754) #17	WFDC1 (ENSCAFG00845004741) #18	ATP2C2 (ENSCAFG00845004715) #19	MEAK7 (ENSCAFG00845004695) #20	COTL1 (ENSCAFG00845004688) #21	KLHL36 (ENSCAFG00845004673) #22	USP10 (ENSCAFG00845004628) #23	CRISPLD2 (ENSCAFG00845004605) #24	ZDHHC7 (ENSCAFG00845004590) #25	KIAA0513 (ENSCAFG00845004575) #26	CIBAR2 (ENSCAFG00845004497) #27	GSE1 (ENSCAFG00845004430) #28	GINS2 (ENSCAFG00845004327) #29	C5H16orf74 (ENSCAFG00845004314) #30	ENSCAFG00845004296 #31	COX4I1 (ENSCAFG00845004280) #32	IRF8 (ENSCAFG00845004258) #33	FOXF1 (ENSCAFG00845004240) #34	ENSCAFG00845004233 #35	ENSCAFG00845004229 #35	FOXC2 (ENSCAFG00845004221) #36
Red fox	MODERN SPECIES	51	HSBP1 (ENSVVUG00000030240) #7	MLYCD (ENSVVUG00000030241) #8	OSGIN1 (ENSVVUG00000030243) #9	NECAB2 (ENSVVUG00000030246) #10	SLC38A8 (ENSVVUG00000030249) #11	MBTPS1 (ENSVVUG00000030252) #12	ENSVVUG00000030261	HSDL1 (ENSVVUG00000030265) #13	DNAAF1 (ENSVVUG00000030269) #14	TAF1C (ENSVVUG00000030271) #15	ADAD2 (ENSVVUG00000030274) #16	KCNG4 (ENSVVUG00000030275) #17	ATP2C2 (ENSVVUG00000030286) #19	MEAK7 (ENSVVUG00000030302) #20	COTL1 (ENSVVUG00000030305) #21	KLHL36 (ENSVVUG00000030309) #22	USP10 (ENSVVUG00000030314) #23	CRISPLD2 (ENSVVUG00000030326) #24	ZDHHC7 (ENSVVUG00000030328) #25	KIAA0513 (ENSVVUG00000000141) #26	CIBAR2 (ENSVVUG00000000202) #27	GSE1 (ENSVVUG00000000307) #28	GINS2 (ENSVVUG00000000445) #29	ENSVVUG00000000460	EMC8 (ENSVVUG00000000490) #31	ENSVVUG00000000506 #32	IRF8 (ENSVVUG00000000647) #33	FOXF1 (ENSVVUG00000000664) #34	ENSVVUG00000000674 #35	ENSVVUG00000000715 #36	FOXL1 (ENSVVUG00000000732) #37
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Equus	ANCESTRAL SPECIES	20	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Horse	MODERN SPECIES	22	CDH13 (ENSECAG00000021162)	MLYCD (ENSECAG00000022837) #8	OSGIN1 (ENSECAG00000023023) #9	NECAB2 (ENSECAG00000023746) #10	SLC38A8 (ENSECAG00000003354) #11	MBTPS1 (ENSECAG00000010283) #12	HSDL1 (ENSECAG00000009577) #13	DNAAF1 (ENSECAG00000013646) #14	TAF1C (ENSECAG00000015734) #15	ADAD2 (ENSECAG00000020331) #16	KCNG4 (ENSECAG00000022493) #17	WFDC1 (ENSECAG00000004502) #18	ATP2C2 (ENSECAG00000005796) #19	MEAK7 (ENSECAG00000008644) #20	ENSECAG00000055480 #21	KLHL36 (ENSECAG00000015889) #22	USP10 (ENSECAG00000018570) #23	CRISPLD2 (ENSECAG00000024636) #24	ENSECAG00000050040	ZDHHC7 (ENSECAG00000009984) #25	KIAA0513 (ENSECAG00000015676) #26	CIBAR2 (ENSECAG00000020266) #27	GSE1 (ENSECAG00000022532) #28	GINS2 (ENSECAG00000024215) #29	ENSECAG00000052872	ENSECAG00000045015 #30	COX4I1 (ENSECAG00000011722) #32	EMC8 (ENSECAG00000036711) #31	IRF8 (ENSECAG00000015449) #33	FOXF1 (ENSECAG00000020094) #34	MTHFSD (ENSECAG00000020910) #35
Donkey	MODERN SPECIES	20	HSBP1 (ENSEASG00005034692) #7	MLYCD (ENSEASG00005013697) #8	OSGIN1 (ENSEASG00005013700) #9	NECAB2 (ENSEASG00005013703) #10	SLC38A8 (ENSEASG00005013707) #11	MBTPS1 (ENSEASG00005013712) #12	HSDL1 (ENSEASG00005013722) #13	DNAAF1 (ENSEASG00005027556) #14	TAF1C (ENSEASG00005013733) #15	ADAD2 (ENSEASG00005030551) #16	KCNG4 (ENSEASG00005013738) #17	WFDC1 (ENSEASG00005013743) #18	ATP2C2 (ENSEASG00005013751) #19	MEAK7 (ENSEASG00005013769) #20	COTL1 (ENSEASG00005037760) #21	KLHL36 (ENSEASG00005013780) #22	ENSEASG00005013785 #23	CRISPLD2 (ENSEASG00005013792) #24	ZDHHC7 (ENSEASG00005013801) #25	KIAA0513 (ENSEASG00005013807) #26	CIBAR2 (ENSEASG00005013810) #27	GSE1 (ENSEASG00005013819) #28	GINS2 (ENSEASG00005027328) #29	ENSEASG00005031991 #30	ENSEASG00005007667	EMC8 (ENSEASG00005030942) #31	COX4I1 (ENSEASG00005013831) #32	IRF8 (ENSEASG00005013834) #33	FOXF1 (ENSEASG00005013836) #34	MTHFSD (ENSEASG00005013838) #35	ENSEASG00005029648 #36
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Megabat	MODERN SPECIES	3768															COTL1 (ENSPVAG00000009671) #21	KLHL36 (ENSPVAG00000009672) #22	USP10 (ENSPVAG00000009674) #23	CRISPLD2 (ENSPVAG00000009677) #24
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Greater horseshoe bat	MODERN SPECIES	6	ENSRFEG00010010056 #7	MLYCD (ENSRFEG00010010090) #8	OSGIN1 (ENSRFEG00010010128) #9	NECAB2 (ENSRFEG00010010165) #10	SLC38A8 (ENSRFEG00010010227) #11	MBTPS1 (ENSRFEG00010010334) #12	HSDL1 (ENSRFEG00010010391) #13	DNAAF1 (ENSRFEG00010010447) #14	TAF1C (ENSRFEG00010010672) #15	ADAD2 (ENSRFEG00010010718) #16	KCNG4 (ENSRFEG00010010881) #17	WFDC1 (ENSRFEG00010010900) #18	ATP2C2 (ENSRFEG00010010953) #19	MEAK7 (ENSRFEG00010011045) #20	COTL1 (ENSRFEG00010011063) #21	KLHL36 (ENSRFEG00010011149) #22	USP10 (ENSRFEG00010011213) #23	CRISPLD2 (ENSRFEG00010011308) #24	ZDHHC7 (ENSRFEG00010011434) #25	KIAA0513 (ENSRFEG00010011489) #26	CIBAR2 (ENSRFEG00010011597) #27	GSE1 (ENSRFEG00010011704) #28	GINS2 (ENSRFEG00010011819) #29	C16orf74 (ENSRFEG00010011859) #30	EMC8 (ENSRFEG00010011988) #31	COX4I1 (ENSRFEG00010012144) #32	IRF8 (ENSRFEG00010012214) #33	FOXF1 (ENSRFEG00010012317) #34	MTHFSD (ENSRFEG00010012359) #35	ENSRFEG00010012380 #36	ENSRFEG00010012391 #37
Microbat	DUPLICATION
Microbat	MODERN SPECIES	1078						ENSMLUG00000001204	RAB19 (ENSMLUG00000002031)	ENSMLUG00000006053	DENND2A (ENSMLUG00000006056)	ENSMLUG00000029101	ADCK2 (ENSMLUG00000007534)	NDUFB2 (ENSMLUG00000014604)	BRAF (ENSMLUG00000007544)	ENSMLUG00000013994	ENSMLUG00000026797	ENSMLUG00000030661 #22	ENSMLUG00000007083	ENSMLUG00000030506	AGK (ENSMLUG00000007092)	DENND11 (ENSMLUG00000007121)	WEE2 (ENSMLUG00000029750)	SSBP1 (ENSMLUG00000007133)	TAS2R3 (ENSMLUG00000007928)	TAS2R4 (ENSMLUG00000028078)	TAS2R5 (ENSMLUG00000006021)	PRSS37 (ENSMLUG00000006019)	ENSMLUG00000023258	OR9A1P (ENSMLUG00000027938)	CLEC5A (ENSMLUG00000017259)	TAS2R38 (ENSMLUG00000013296)	MGAM (ENSMLUG00000017263)
Microbat	DUPLICATION
Microbat	MODERN SPECIES	972	ENSMLUG00000007609	HSBP1 (ENSMLUG00000007636) #7	MLYCD (ENSMLUG00000002980) #8	OSGIN1 (ENSMLUG00000002987) #9	NECAB2 (ENSMLUG00000002998) #10	SLC38A8 (ENSMLUG00000003006) #11	MBTPS1 (ENSMLUG00000003013) #12	HSDL1 (ENSMLUG00000003026) #13	DNAAF1 (ENSMLUG00000003031) #14	TAF1C (ENSMLUG00000003039) #15	ADAD2 (ENSMLUG00000003054) #16	KCNG4 (ENSMLUG00000003092) #17	ENSMLUG00000003102 #19	MEAK7 (ENSMLUG00000003120) #20	COTL1 (ENSMLUG00000004366) #21	ENSMLUG00000004360 #22	ENSMLUG00000028097	USP10 (ENSMLUG00000025041) #23	CRISPLD2 (ENSMLUG00000017216) #24	ZDHHC7 (ENSMLUG00000017220) #25	KIAA0513 (ENSMLUG00000017224) #26	CIBAR2 (ENSMLUG00000017227) #27	GSE1 (ENSMLUG00000002229) #28	GINS2 (ENSMLUG00000002225) #29	ENSMLUG00000026796	C16orf74 (ENSMLUG00000002220) #30	EMC8 (ENSMLUG00000012576) #31	COX4I1 (ENSMLUG00000012579) #32	IRF8 (ENSMLUG00000005109) #33	MTHFSD (ENSMLUG00000017129) #35	FOXC2 (ENSMLUG00000024312) #36
Microbat	MODERN SPECIES	371																ENSMLUG00000027881 #22
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000157543 #22
Hedgehog	MODERN SPECIES	3253																KLHL36 (ENSEEUG00000010625) #22
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00970000197463	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Tree shrew	MODERN SPECIES	1633															ATP2C2 (ENSTBEG00000005596) #19	KLHL36 (ENSTBEG00000006457) #22
Glires	ANCESTRAL SPECIES	6	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Lagomorpha	ANCESTRAL SPECIES	278													ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00390000009535 #26	ENSGT00390000010285.d #27
Rabbit	MODERN SPECIES	644														ENSOCUG00000024636 #20	ENSOCUG00000014762 #21	KLHL36 (ENSOCUG00000010881) #22	USP10 (ENSOCUG00000007926) #23	CRISPLD2 (ENSOCUG00000029358) #24	KIAA0513 (ENSOCUG00000003057) #26	CIBAR2 (ENSOCUG00000022584) #27
Pika	MODERN SPECIES	5408															ENSOPRG00000014323 #21	ENSOPRG00000014365 #22	ENSOPRG00000014382 #23
Rodentia	ANCESTRAL SPECIES	8	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Muroidea	ANCESTRAL SPECIES	19	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Chinese hamster chok1gshd	MODERN SPECIES	112	Hsbp1 (ENSCGRG00001016781) #7	Mlycd (ENSCGRG00001017150) #8	Osgin1 (ENSCGRG00001001559) #9	Necab2 (ENSCGRG00001019458) #10	Slc38a8 (ENSCGRG00001013617) #11	MBTPS1 (ENSCGRG00001022644) #12	Hsdl1 (ENSCGRG00001016417) #13	Dnaaf1 (ENSCGRG00001020629) #14	Taf1c (ENSCGRG00001015596) #15	Adad2 (ENSCGRG00001022301) #16	Kcng4 (ENSCGRG00001020925) #17	Wfdc1 (ENSCGRG00001002287) #18	Atp2c2 (ENSCGRG00001000729) #19	Meak7 (ENSCGRG00001013437) #20	Cotl1 (ENSCGRG00001016437) #21	Klhl36 (ENSCGRG00001012498) #22	Usp10 (ENSCGRG00001016659) #23	Crispld2 (ENSCGRG00001013763) #24	Zdhhc7 (ENSCGRG00001018537) #25	6430548M08Rik (ENSCGRG00001012987) #26	Cibar2 (ENSCGRG00001022439) #27	Gse1 (ENSCGRG00001008954) #28	ENSCGRG00001025043 #29	1190005I06Rik (ENSCGRG00001014481) #30	ENSCGRG00001023203 #31	Cox4i1 (ENSCGRG00001018081) #32	Irf8 (ENSCGRG00001014127) #33	Foxf1 (ENSCGRG00001012787) #34	Mthfsd (ENSCGRG00001017690) #35	Foxc2 (ENSCGRG00001011497) #36	Foxl1 (ENSCGRG00001003256) #37
Golden Hamster	MODERN SPECIES	654	Hsbp1 (ENSMAUG00000014829) #7	Mlycd (ENSMAUG00000016063) #8	Osgin1 (ENSMAUG00000006693) #9	Necab2 (ENSMAUG00000001187) #10	Slc38a8 (ENSMAUG00000015910) #11	Mbtps1 (ENSMAUG00000020490) #12	Hsdl1 (ENSMAUG00000011417) #13	ENSMAUG00000015395	Taf1c (ENSMAUG00000010064) #15	Adad2 (ENSMAUG00000018979) #16	Kcng4 (ENSMAUG00000001478) #17	Wfdc1 (ENSMAUG00000014335) #18	Atp2c2 (ENSMAUG00000014637) #19	Meak7 (ENSMAUG00000011475) #20	Cotl1 (ENSMAUG00000021454) #21	Klhl36 (ENSMAUG00000009405) #22	ENSMAUG00000022219 #23	Crispld2 (ENSMAUG00000015539) #24	Zdhhc7 (ENSMAUG00000011861) #25	ENSMAUG00000022003 #27	Gse1 (ENSMAUG00000015481) #28	ENSMAUG00000004344 #29	1190005I06Rik (ENSMAUG00000008776) #30	Emc8 (ENSMAUG00000008013) #31	Cox4i1 (ENSMAUG00000008155) #32	Irf8 (ENSMAUG00000014953) #33	Foxf1 (ENSMAUG00000011152) #34	Mthfsd (ENSMAUG00000007528) #35	Foxc2 (ENSMAUG00000009373) #36	Foxl1 (ENSMAUG00000009223) #37	1700018B08Rik (ENSMAUG00000007616)
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Prairie vole	MODERN SPECIES	12	Cdh13 (ENSMOCG00000019245)	Hsbp1 (ENSMOCG00000017033) #7	Mlycd (ENSMOCG00000014323) #8	Osgin1 (ENSMOCG00000021893) #9	Slc38a8 (ENSMOCG00000011828) #11	Mbtps1 (ENSMOCG00000011449) #12	Hsdl1 (ENSMOCG00000017214) #13	Dnaaf1 (ENSMOCG00000019064) #14	Taf1c (ENSMOCG00000019673) #15	Adad2 (ENSMOCG00000002402) #16	Kcng4 (ENSMOCG00000021900) #17	Wfdc1 (ENSMOCG00000000788) #18	Atp2c2 (ENSMOCG00000017372) #19	Meak7 (ENSMOCG00000006094) #20	Cotl1 (ENSMOCG00000015249) #21	Klhl36 (ENSMOCG00000015455) #22	ENSMOCG00000016451 #23	Galnt2 (ENSMOCG00000010754)	Crispld2 (ENSMOCG00000019662) #24	Zdhhc7 (ENSMOCG00000017050) #25	6430548M08Rik (ENSMOCG00000013698) #26	ENSMOCG00000016082 #27	Gse1 (ENSMOCG00000019792) #28	Gins2 (ENSMOCG00000005463) #29	1190005I06Rik (ENSMOCG00000019559) #30	Emc8 (ENSMOCG00000009432) #31	Cox4i1 (ENSMOCG00000003253) #32	Irf8 (ENSMOCG00000016592) #33	Foxf1 (ENSMOCG00000020101) #34	Mthfsd (ENSMOCG00000004916) #35	1700018B08Rik (ENSMOCG00000003707)
Northern American deer mouse	MODERN SPECIES	18	ENSPEMG00000030115 #7	Mlycd (ENSPEMG00000019846) #8	Osgin1 (ENSPEMG00000020010) #9	Necab2 (ENSPEMG00000019626) #10	Slc38a8 (ENSPEMG00000024033) #11	Mbtps1 (ENSPEMG00000016147) #12	Hsdl1 (ENSPEMG00000013927) #13	Dnaaf1 (ENSPEMG00000000781) #14	Taf1c (ENSPEMG00000014044) #15	Adad2 (ENSPEMG00000004734) #16	Kcng4 (ENSPEMG00000027802) #17	Wfdc1 (ENSPEMG00000009882) #18	Atp2c2 (ENSPEMG00000014405) #19	Meak7 (ENSPEMG00000017023) #20	Cotl1 (ENSPEMG00000026921) #21	Klhl36 (ENSPEMG00000000651) #22	Usp10 (ENSPEMG00000000795) #23	Crispld2 (ENSPEMG00000000602) #24	Zdhhc7 (ENSPEMG00000025381) #25	ENSPEMG00000026751	6430548M08Rik (ENSPEMG00000024280) #26	Cibar2 (ENSPEMG00000023745) #27	Gse1 (ENSPEMG00000010493) #28	Gins2 (ENSPEMG00000024576) #29	ENSPEMG00000006069	1190005I06Rik (ENSPEMG00000013297) #30	Emc8 (ENSPEMG00000014006) #31	Cox4i1 (ENSPEMG00000009275) #32	Irf8 (ENSPEMG00000023561) #33	Foxf1 (ENSPEMG00000015294) #34	Mthfsd (ENSPEMG00000023762) #35
Murinae	ANCESTRAL SPECIES	15	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Mus	ANCESTRAL SPECIES	6	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933.e.b #30	ENSGT00390000015933.e.a #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933.e.b #30	ENSGT00390000015933.e.a #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Mouse	MODERN SPECIES	17	Hsbp1 (ENSMUSG00000031839) #7	Mlycd (ENSMUSG00000074064) #8	Osgin1 (ENSMUSG00000074063) #9	Necab2 (ENSMUSG00000031837) #10	Slc38a8 (ENSMUSG00000034224) #11	Mbtps1 (ENSMUSG00000031835) #12	Hsdl1 (ENSMUSG00000034189) #13	Dnaaf1 (ENSMUSG00000031831) #14	Taf1c (ENSMUSG00000031832) #15	Adad2 (ENSMUSG00000024266) #16	Kcng4 (ENSMUSG00000045246) #17	Wfdc1 (ENSMUSG00000023336) #18	Atp2c2 (ENSMUSG00000034112) #19	Meak7 (ENSMUSG00000034105) #20	Cotl1 (ENSMUSG00000031827) #21	Klhl36 (ENSMUSG00000031828) #22	Usp10 (ENSMUSG00000031826) #23	Crispld2 (ENSMUSG00000031825) #24	Zdhhc7 (ENSMUSG00000031823) #25	6430548M08Rik (ENSMUSG00000031824) #26	Cibar2 (ENSMUSG00000042269) #27	Gse1 (ENSMUSG00000031822) #28	Gins2 (ENSMUSG00000031821) #29	1190005I06Rik (ENSMUSG00000043687) #30	Gm27021 (ENSMUSG00000097919)	Emc8 (ENSMUSG00000031819) #31	Cox4i1 (ENSMUSG00000031818) #32	Irf8 (ENSMUSG00000041515) #33	Foxf1 (ENSMUSG00000042812) #34	Mthfsd (ENSMUSG00000031816) #35	Foxc2 (ENSMUSG00000046714) #36
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933.e.b #30	ENSGT00390000015933.e.a #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
spretus	MODERN SPECIES	17	Hsbp1 (MGP_SPRETEiJ_G0032733) #7	Mlycd (MGP_SPRETEiJ_G0032734) #8	Osgin1 (MGP_SPRETEiJ_G0032735) #9	Necab2 (MGP_SPRETEiJ_G0032736) #10	Slc38a8 (MGP_SPRETEiJ_G0032737) #11	Mbtps1 (MGP_SPRETEiJ_G0032738) #12	Hsdl1 (MGP_SPRETEiJ_G0032739) #13	Dnaaf1 (MGP_SPRETEiJ_G0032740) #14	Taf1c (MGP_SPRETEiJ_G0032741) #15	Adad2 (MGP_SPRETEiJ_G0032742) #16	Kcng4 (MGP_SPRETEiJ_G0032743) #17	Wfdc1 (MGP_SPRETEiJ_G0032744) #18	Atp2c2 (MGP_SPRETEiJ_G0032745) #19	Meak7 (MGP_SPRETEiJ_G0032746) #20	Cotl1 (MGP_SPRETEiJ_G0032747) #21	Klhl36 (MGP_SPRETEiJ_G0032748) #22	Usp10 (MGP_SPRETEiJ_G0032749) #23	Crispld2 (MGP_SPRETEiJ_G0032750) #24	Zdhhc7 (MGP_SPRETEiJ_G0032751) #25	6430548M08Rik (MGP_SPRETEiJ_G0032752) #26	Cibar2 (MGP_SPRETEiJ_G0032753) #27	Gse1 (MGP_SPRETEiJ_G0032754) #28	Gins2 (MGP_SPRETEiJ_G0032755) #29	MGP_SPRETEiJ_G0032756 #30	MGP_SPRETEiJ_G0032757 #30	Emc8 (MGP_SPRETEiJ_G0032758) #31	Cox4i1 (MGP_SPRETEiJ_G0032759) #32	Irf8 (MGP_SPRETEiJ_G0032760) #33	Foxf1 (MGP_SPRETEiJ_G0032761) #34	Mthfsd (MGP_SPRETEiJ_G0032762) #35	Foxc2 (MGP_SPRETEiJ_G0032763) #36
Steppe mouse	MODERN SPECIES	2773			Osgin1 (ENSMSIG00000019099) #9	Necab2 (ENSMSIG00000019081) #10	Slc38a8 (ENSMSIG00000019048) #11	Mbtps1 (ENSMSIG00000018991) #12	Hsdl1 (ENSMSIG00000018978) #13	Dnaaf1 (ENSMSIG00000018939) #14	Taf1c (ENSMSIG00000018907) #15	Adad2 (ENSMSIG00000018894) #16	Kcng4 (ENSMSIG00000018863) #17	ENSMSIG00000018847 #18	Atp2c2 (ENSMSIG00000018791) #19	Meak7 (ENSMSIG00000018779) #20	Cotl1 (ENSMSIG00000018773) #21	Klhl36 (ENSMSIG00000018763) #22	Usp10 (ENSMSIG00000018729) #23	Crispld2 (ENSMSIG00000018677) #24	Zdhhc7 (ENSMSIG00000018654) #25	6430548M08Rik (ENSMSIG00000018599) #26	ENSMSIG00000018574 #27
Ryukyu mouse	MODERN SPECIES	17	Hsbp1 (MGP_CAROLIEiJ_G0031615) #7	Mlycd (MGP_CAROLIEiJ_G0031616) #8	Osgin1 (MGP_CAROLIEiJ_G0031617) #9	Necab2 (MGP_CAROLIEiJ_G0031618) #10	Slc38a8 (MGP_CAROLIEiJ_G0031619) #11	Mbtps1 (MGP_CAROLIEiJ_G0031620) #12	Hsdl1 (MGP_CAROLIEiJ_G0031621) #13	Dnaaf1 (MGP_CAROLIEiJ_G0031622) #14	Taf1c (MGP_CAROLIEiJ_G0031623) #15	Adad2 (MGP_CAROLIEiJ_G0031624) #16	Kcng4 (MGP_CAROLIEiJ_G0031625) #17	Wfdc1 (MGP_CAROLIEiJ_G0031626) #18	Atp2c2 (MGP_CAROLIEiJ_G0031627) #19	Meak7 (MGP_CAROLIEiJ_G0031628) #20	Cotl1 (MGP_CAROLIEiJ_G0031629) #21	Klhl36 (MGP_CAROLIEiJ_G0031630) #22	Usp10 (MGP_CAROLIEiJ_G0031631) #23	Crispld2 (MGP_CAROLIEiJ_G0031632) #24	Zdhhc7 (MGP_CAROLIEiJ_G0031633) #25	6430548M08Rik (MGP_CAROLIEiJ_G0031634) #26	Cibar2 (MGP_CAROLIEiJ_G0031635) #27	Gse1 (MGP_CAROLIEiJ_G0031636) #28	Gins2 (MGP_CAROLIEiJ_G0031637) #29	MGP_CAROLIEiJ_G0031638 #30	MGP_CAROLIEiJ_G0031639 #30	Emc8 (MGP_CAROLIEiJ_G0031640) #31	Cox4i1 (MGP_CAROLIEiJ_G0031641) #32	Irf8 (MGP_CAROLIEiJ_G0031642) #33	Foxf1 (MGP_CAROLIEiJ_G0031643) #34	Mthfsd (MGP_CAROLIEiJ_G0031644) #35	Foxc2 (MGP_CAROLIEiJ_G0031645) #36
Shrew mouse	MODERN SPECIES	12	Hsbp1 (MGP_PahariEiJ_G0023213) #7	Mlycd (MGP_PahariEiJ_G0023214) #8	Osgin1 (MGP_PahariEiJ_G0023215) #9	Necab2 (MGP_PahariEiJ_G0023216) #10	Slc38a8 (MGP_PahariEiJ_G0023217) #11	Mbtps1 (MGP_PahariEiJ_G0023218) #12	Hsdl1 (MGP_PahariEiJ_G0023219) #13	Dnaaf1 (MGP_PahariEiJ_G0023220) #14	MGP_PahariEiJ_G0023221 #15	Adad2 (MGP_PahariEiJ_G0023222) #16	Kcng4 (MGP_PahariEiJ_G0023223) #17	Wfdc1 (MGP_PahariEiJ_G0023224) #18	Atp2c2 (MGP_PahariEiJ_G0023225) #19	Meak7 (MGP_PahariEiJ_G0023226) #20	Cotl1 (MGP_PahariEiJ_G0023227) #21	Klhl36 (MGP_PahariEiJ_G0023228) #22	Usp10 (MGP_PahariEiJ_G0023229) #23	Crispld2 (MGP_PahariEiJ_G0023230) #24	Zdhhc7 (MGP_PahariEiJ_G0023231) #25	6430548M08Rik (MGP_PahariEiJ_G0023232) #26	MGP_PahariEiJ_G0023233 #27	Gse1 (MGP_PahariEiJ_G0023234) #28	Gins2 (MGP_PahariEiJ_G0023235) #29	MGP_PahariEiJ_G0023236 #30	MGP_PahariEiJ_G0023237 #30	Emc8 (MGP_PahariEiJ_G0023238) #31	Cox4i1 (MGP_PahariEiJ_G0023239) #32	Irf8 (MGP_PahariEiJ_G0023240) #33	Foxf1 (MGP_PahariEiJ_G0023241) #34	Mthfsd (MGP_PahariEiJ_G0023242) #35	Foxc2 (MGP_PahariEiJ_G0023243) #36
Rat	MODERN SPECIES	10	Hsbp1 (ENSRNOG00000014415) #7	Mlycd (ENSRNOG00000014522) #8	Osgin1 (ENSRNOG00000014948) #9	Necab2 (ENSRNOG00000015084) #10	Slc38a8 (ENSRNOG00000025503) #11	Mbtps1 (ENSRNOG00000015173) #12	Hsdl1 (ENSRNOG00000015576) #13	Dnaaf1 (ENSRNOG00000015590) #14	Taf1c (ENSRNOG00000015632) #15	Adad2 (ENSRNOG00000015690) #16	Kcng4 (ENSRNOG00000015746) #17	Wfdc1 (ENSRNOG00000015904) #18	Atp2c2 (ENSRNOG00000049334) #19	Meak7 (ENSRNOG00000016224) #20	Cotl1 (ENSRNOG00000016257) #21	Klhl36 (ENSRNOG00000016422) #22	Usp10 (ENSRNOG00000016509) #23	Crispld2 (ENSRNOG00000016752) #24	Zdhhc7 (ENSRNOG00000017342) #25	RGD1304884 (ENSRNOG00000017431) #26	Cibar2 (ENSRNOG00000021714) #27	Gse1 (ENSRNOG00000017489) #28	Emc8 (ENSRNOG00000017654) #31	Gins2 (ENSRNOG00000017575) #29	RGD1309651 (ENSRNOG00000017646) #30	Cox4i1 (ENSRNOG00000017817) #32	Irf8 (ENSRNOG00000017869) #33	Foxf1 (ENSRNOG00000049906) #34	Mthfsd (ENSRNOG00000046443) #35	Foxc2 (ENSRNOG00000047446) #36	Foxl1 (ENSRNOG00000047125) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	583	Mlycd (ENSNGAG00000012994) #8	Osgin1 (ENSNGAG00000010649) #9	Necab2 (ENSNGAG00000016498) #10	Slc38a8 (ENSNGAG00000006822) #11	ENSNGAG00000002575	Mbtps1 (ENSNGAG00000001100) #12	ENSNGAG00000019486	Dnaaf1 (ENSNGAG00000015112) #14	ENSNGAG00000011435 #15	Adad2 (ENSNGAG00000000370) #16	Kcng4 (ENSNGAG00000019969) #17	Wfdc1 (ENSNGAG00000019426) #18	Atp2c2 (ENSNGAG00000017868) #19	Meak7 (ENSNGAG00000015168) #20	Cotl1 (ENSNGAG00000019839) #21	Klhl36 (ENSNGAG00000020803) #22	Usp10 (ENSNGAG00000019923) #23	Crispld2 (ENSNGAG00000016198) #24	Zdhhc7 (ENSNGAG00000007568) #25	6430548M08Rik (ENSNGAG00000004942) #26	Cibar2 (ENSNGAG00000018324) #27	Gse1 (ENSNGAG00000013557) #28	Gins2 (ENSNGAG00000012534) #29	1190005I06Rik (ENSNGAG00000012010) #30	ENSNGAG00000004808	Emc8 (ENSNGAG00000010024) #31	Cox4i1 (ENSNGAG00000007265) #32	Irf8 (ENSNGAG00000003384) #33
Lesser Egyptian jerboa	MODERN SPECIES	127	Kcnn1 (ENSJJAG00000020481)	Ccdc124 (ENSJJAG00000019135)	Slc5a5 (ENSJJAG00000009288)	Rpl18a (ENSJJAG00000007815)	Jak3 (ENSJJAG00000012029)	Insl3 (ENSJJAG00000016872)	B3gnt3 (ENSJJAG00000015210)	Fcho1 (ENSJJAG00000016420)	Map1s (ENSJJAG00000024424)	ENSJJAG00000021570	ENSJJAG00000019428	Niban3 (ENSJJAG00000017157)	Pgls (ENSJJAG00000020229)	Slc27a1 (ENSJJAG00000005144)	ENSJJAG00000000638 #21	Klhl36 (ENSJJAG00000007502) #22	ENSJJAG00000013110 #23	Crispld2 (ENSJJAG00000019183) #24	Zdhhc7 (ENSJJAG00000011006) #25	6430548M08Rik (ENSJJAG00000023275) #26	ENSJJAG00000004544 #27	Gse1 (ENSJJAG00000023899) #28	Gins2 (ENSJJAG00000020194) #29	1190005I06Rik (ENSJJAG00000021284) #30	Emc8 (ENSJJAG00000008733) #31	ENSJJAG00000015382 #32	Irf8 (ENSJJAG00000022546) #33	Foxf1 (ENSJJAG00000017904) #34	Mthfsd (ENSJJAG00000014622) #35	Foxc2 (ENSJJAG00000015847) #36	Foxl1 (ENSJJAG00000009393) #37
Kangaroo rat	MODERN SPECIES	337	Mphosph6 (ENSDORG00000011060)	Cdh13 (ENSDORG00000015523)	ENSDORG00000009913	ENSDORG00000001345 #9	Necab2 (ENSDORG00000001348) #10	Slc38a8 (ENSDORG00000016238) #11	Mbtps1 (ENSDORG00000016240) #12	ENSDORG00000023331	Taf1c (ENSDORG00000003552) #15	Adad2 (ENSDORG00000003555) #16	Kcng4 (ENSDORG00000025718) #17	Wfdc1 (ENSDORG00000011963) #18	Atp2c2 (ENSDORG00000014196) #19	Meak7 (ENSDORG00000023611) #20	ENSDORG00000024417 #21	Klhl36 (ENSDORG00000010709) #22	Usp10 (ENSDORG00000029612) #23	ENSDORG00000013840 #24	Zdhhc7 (ENSDORG00000009362) #25	6430548M08Rik (ENSDORG00000015180) #26	Gse1 (ENSDORG00000001483) #28	Gins2 (ENSDORG00000028179) #29	Emc8 (ENSDORG00000015961) #31	Cox4i1 (ENSDORG00000015962) #32	Irf8 (ENSDORG00000015963) #33	ENSDORG00000025072 #33	Foxf1 (ENSDORG00000028960) #34	ENSDORG00000024165 #35	ENSDORG00000003011	Fbxo31 (ENSDORG00000003010)	ENSDORG00000013862
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00390000006293.xc #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00390000006293.xc #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Marmotini	ANCESTRAL SPECIES	17	ENSGT00390000006293.xc #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Marmotini_b	ANCESTRAL SPECIES	64	ENSGT00390000006293.xc #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Arctic ground squirrel	MODERN SPECIES	495	MLYCD (ENSUPAG00010022123) #8	OSGIN1 (ENSUPAG00010022118) #9	NECAB2 (ENSUPAG00010022113) #10	SLC38A8 (ENSUPAG00010022111) #11	MBTPS1 (ENSUPAG00010022097) #12	HSDL1 (ENSUPAG00010022091) #13	ENSUPAG00010022086 #14	TAF1C (ENSUPAG00010022083) #15	ADAD2 (ENSUPAG00010022081) #16	KCNG4 (ENSUPAG00010022079) #17	WFDC1 (ENSUPAG00010022074) #18	ATP2C2 (ENSUPAG00010022064) #19	MEAK7 (ENSUPAG00010022059) #20	ENSUPAG00010022056	COTL1 (ENSUPAG00010022052) #21	KLHL36 (ENSUPAG00010022049) #22	USP10 (ENSUPAG00010022042) #23	CRISPLD2 (ENSUPAG00010022037) #24	ZDHHC7 (ENSUPAG00010022034) #25	KIAA0513 (ENSUPAG00010022029) #26	CIBAR2 (ENSUPAG00010022028) #27
Squirrel	MODERN SPECIES	241	CDH13 (ENSSTOG00000028955)	ENSSTOG00000030876 #7	ENSSTOG00000032786 #8	OSGIN1 (ENSSTOG00000023978) #9	NECAB2 (ENSSTOG00000011331) #10	SLC38A8 (ENSSTOG00000008237) #11	ENSSTOG00000034662	MBTPS1 (ENSSTOG00000008258) #12	HSDL1 (ENSSTOG00000020151) #13	DNAAF1 (ENSSTOG00000028624) #14	ADAD2 (ENSSTOG00000008305) #16	KCNG4 (ENSSTOG00000024590) #17	ATP2C2 (ENSSTOG00000019541) #19	ENSSTOG00000013915 #20	COTL1 (ENSSTOG00000024619) #21	KLHL36 (ENSSTOG00000028793) #22	USP10 (ENSSTOG00000015533) #23	CRISPLD2 (ENSSTOG00000015829) #24	ZDHHC7 (ENSSTOG00000002882) #25	KIAA0513 (ENSSTOG00000028748) #26	ENSSTOG00000024743 #27	GSE1 (ENSSTOG00000023594) #28	GINS2 (ENSSTOG00000034725) #29	C16orf74 (ENSSTOG00000030213) #30	EMC8 (ENSSTOG00000024929) #31	COX4I1 (ENSSTOG00000024338) #32	IRF8 (ENSSTOG00000028363) #33	MTHFSD (ENSSTOG00000013775) #35	FOXC2 (ENSSTOG00000028715) #36	FOXL1 (ENSSTOG00000024336) #37	ENSSTOG00000033877
Alpin marmot	MODERN SPECIES	43	MLYCD (ENSMMMG00000012063) #8	OSGIN1 (ENSMMMG00000012058) #9	NECAB2 (ENSMMMG00000012005) #10	SLC38A8 (ENSMMMG00000011987) #11	MBTPS1 (ENSMMMG00000011923) #12	HSDL1 (ENSMMMG00000011916) #13	ENSMMMG00000011906 #14	TAF1C (ENSMMMG00000011682) #15	ADAD2 (ENSMMMG00000011640) #16	KCNG4 (ENSMMMG00000011631) #17	WFDC1 (ENSMMMG00000011602) #18	ATP2C2 (ENSMMMG00000011564) #19	MEAK7 (ENSMMMG00000011532) #20	COTL1 (ENSMMMG00000011526) #21	ENSMMMG00000011519	KLHL36 (ENSMMMG00000011503) #22	USP10 (ENSMMMG00000011492) #23	CRISPLD2 (ENSMMMG00000011478) #24	ZDHHC7 (ENSMMMG00000011453) #25	KIAA0513 (ENSMMMG00000011399) #26	CIBAR2 (ENSMMMG00000011379) #27	GSE1 (ENSMMMG00000011317) #28	GINS2 (ENSMMMG00000011300) #29	C16orf74 (ENSMMMG00000011294) #30	EMC8 (ENSMMMG00000011287) #31	COX4I1 (ENSMMMG00000011279) #32	IRF8 (ENSMMMG00000011251) #33	MTHFSD (ENSMMMG00000011215) #35	ENSMMMG00000011204 #36	FBXO31 (ENSMMMG00000011196)	ENSMMMG00000011190
Eurasian red squirrel	MODERN SPECIES	8	HSBP1 (ENSSVLG00005025608) #7	MLYCD (ENSSVLG00005025603) #8	OSGIN1 (ENSSVLG00005025591) #9	NECAB2 (ENSSVLG00005025579) #10	SLC38A8 (ENSSVLG00005025564) #11	MBTPS1 (ENSSVLG00005025551) #12	HSDL1 (ENSSVLG00005025542) #13	ENSSVLG00005025537 #14	TAF1C (ENSSVLG00005025522) #15	ADAD2 (ENSSVLG00005025502) #16	KCNG4 (ENSSVLG00005025497) #17	WFDC1 (ENSSVLG00005025483) #18	ATP2C2 (ENSSVLG00005025455) #19	MEAK7 (ENSSVLG00005025432) #20	COTL1 (ENSSVLG00005025422) #21	KLHL36 (ENSSVLG00005025411) #22	ENSSVLG00005025383 #23	CRISPLD2 (ENSSVLG00005025364) #24	ENSSVLG00005025342 #25	KIAA0513 (ENSSVLG00005025327) #26	CIBAR2 (ENSSVLG00005025303) #27	GSE1 (ENSSVLG00005025260) #28	GINS2 (ENSSVLG00005025227) #29	C16orf74 (ENSSVLG00005025197) #30	EMC8 (ENSSVLG00005025171) #31	COX4I1 (ENSSVLG00005025146) #32	ENSSVLG00005025133	IRF8 (ENSSVLG00005025108) #33	FOXF1 (ENSSVLG00005025093) #34	MTHFSD (ENSSVLG00005025053) #35	FOXC2 (ENSSVLG00005025014) #36
Hystricomorpha	ANCESTRAL SPECIES	59													ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Hystricomorpha_a	ANCESTRAL SPECIES	64													ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Hystricomorpha_b	ANCESTRAL SPECIES	82													ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162251 #37	ENSGT00390000001368
Long-tailed chinchilla	MODERN SPECIES	248													ATP2C2 (ENSCLAG00000001971) #19	MEAK7 (ENSCLAG00000002725) #20	COTL1 (ENSCLAG00000000826) #21	KLHL36 (ENSCLAG00000000925) #22	USP10 (ENSCLAG00000001215) #23	CRISPLD2 (ENSCLAG00000000589) #24	ZDHHC7 (ENSCLAG00000000903) #25	KIAA0513 (ENSCLAG00000000984) #26	CIBAR2 (ENSCLAG00000000847) #27	GSE1 (ENSCLAG00000001184) #28	GINS2 (ENSCLAG00000000938) #29	C16orf74 (ENSCLAG00000001005) #30	EMC8 (ENSCLAG00000001317) #31	COX4I1 (ENSCLAG00000001404) #32	IRF8 (ENSCLAG00000001452) #33	FOXF1 (ENSCLAG00000000554) #34	MTHFSD (ENSCLAG00000000611) #35	FOXL1 (ENSCLAG00000000645) #37	FBXO31 (ENSCLAG00000000716)
Degu	MODERN SPECIES	256													ATP2C2 (ENSODEG00000005743) #19	MEAK7 (ENSODEG00000004440) #20	COTL1 (ENSODEG00000004482) #21	KLHL36 (ENSODEG00000004503) #22	USP10 (ENSODEG00000004533) #23	CRISPLD2 (ENSODEG00000004620) #24	ZDHHC7 (ENSODEG00000004683) #25	KIAA0513 (ENSODEG00000004724) #26	CIBAR2 (ENSODEG00000004799) #27	GSE1 (ENSODEG00000004855) #28	GINS2 (ENSODEG00000004957) #29	C16orf74 (ENSODEG00000004976) #30	EMC8 (ENSODEG00000004987) #31	ENSODEG00000004994 #32	ENSODEG00000005004	ENSODEG00000005014	IRF8 (ENSODEG00000005035) #33	FOXF1 (ENSODEG00000003466) #34	MTHFSD (ENSODEG00000003482) #35
Guinea pig	MODERN SPECIES	267															COTL1 (ENSCPOG00000033126) #21	KLHL36 (ENSCPOG00000030578) #22	USP10 (ENSCPOG00000012506) #23	ENSCPOG00000035538 #24	ZDHHC7 (ENSCPOG00000007136) #25	KIAA0513 (ENSCPOG00000024258) #26	CIBAR2 (ENSCPOG00000022368) #27
Naked mole-rat female	MODERN SPECIES	26	CTU2 (ENSHGLG00000015988)	RNF166 (ENSHGLG00000014545)	SNAI3 (ENSHGLG00000018681)	ENSHGLG00000043954	CYBA (ENSHGLG00000050710)	IL17C (ENSHGLG00000037937)	ENSHGLG00000013309	ENSHGLG00000040718	ENSHGLG00000038403	BANP (ENSHGLG00000009601)	ENSHGLG00000011507	ENSHGLG00000014295	ENSHGLG00000014744 #19	ENSHGLG00000012079 #20	COTL1 (ENSHGLG00000018790) #21	KLHL36 (ENSHGLG00000016784) #22	USP10 (ENSHGLG00000016812) #23	ZDHHC7 (ENSHGLG00000010557) #25	KIAA0513 (ENSHGLG00000044322) #26	CIBAR2 (ENSHGLG00000019087) #27	GSE1 (ENSHGLG00000014146) #28	GINS2 (ENSHGLG00000011513) #29	C16orf74 (ENSHGLG00000044539) #30	ENSHGLG00000014169 #31	COX4I1 (ENSHGLG00000040940) #32	IRF8 (ENSHGLG00000014171) #33	FOXF1 (ENSHGLG00000010618) #34	ENSHGLG00000032334 #35	FOXC2 (ENSHGLG00000021315) #36	FOXL1 (ENSHGLG00000045041) #37	FBXO31 (ENSHGLG00000013501)
Primates	ANCESTRAL SPECIES	21	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00970000197463	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00970000197463	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00970000197463	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00390000010578	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00970000197463	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00390000010578	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994.m #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Hominidae	ANCESTRAL SPECIES	9	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00390000010578	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994.m #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00390000009683	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00390000010578	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994.m #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00390000009683	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00390000010578	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994.m #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00390000009683	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Pan	ANCESTRAL SPECIES	19	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00390000010578	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994.m #23	ENSGT00940000157410 #24	ENSGT00950000182857.a.a.b.a.r.a.a.a.a.a.b	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00390000008767.a.a.a.a.g.a	ENSGT00940000158140 #33	ENSGT00390000009683	ENSGT00940000161035 #34
Chimpanzee	MODERN SPECIES	7	MLYCD (ENSPTRG00000008403) #8	OSGIN1 (ENSPTRG00000008404) #9	NECAB2 (ENSPTRG00000008406) #10	SLC38A8 (ENSPTRG00000008407) #11	MBTPS1 (ENSPTRG00000008408) #12	HSDL1 (ENSPTRG00000008409) #13	DNAAF1 (ENSPTRG00000008410) #14	TAF1C (ENSPTRG00000008411) #15	ADAD2 (ENSPTRG00000008412) #16	ENSPTRG00000049743	KCNG4 (ENSPTRG00000008414) #17	WFDC1 (ENSPTRG00000008415) #18	ATP2C2 (ENSPTRG00000008417) #19	MEAK7 (ENSPTRG00000008418) #20	COTL1 (ENSPTRG00000008419) #21	KLHL36 (ENSPTRG00000008420) #22	USP10 (ENSPTRG00000008421) #23	CRISPLD2 (ENSPTRG00000008422) #24	ENSPTRG00000052517	ZDHHC7 (ENSPTRG00000008424) #25	KIAA0513 (ENSPTRG00000008425) #26	CIBAR2 (ENSPTRG00000008427) #27	GSE1 (ENSPTRG00000008429) #28	GINS2 (ENSPTRG00000008430) #29	C16H16orf74 (ENSPTRG00000008431) #30	EMC8 (ENSPTRG00000008433) #31	COX4I1 (ENSPTRG00000008434) #32	ENSPTRG00000051219	IRF8 (ENSPTRG00000008435) #33	ENSPTRG00000049264	FOXF1 (ENSPTRG00000008439) #34
Bonobo	MODERN SPECIES	7	MLYCD (ENSPPAG00000040926) #8	OSGIN1 (ENSPPAG00000026986) #9	NECAB2 (ENSPPAG00000019159) #10	SLC38A8 (ENSPPAG00000027952) #11	MBTPS1 (ENSPPAG00000042255) #12	HSDL1 (ENSPPAG00000038992) #13	DNAAF1 (ENSPPAG00000024772) #14	TAF1C (ENSPPAG00000039257) #15	ADAD2 (ENSPPAG00000028878) #16	ENSPPAG00000033693	KCNG4 (ENSPPAG00000041465) #17	WFDC1 (ENSPPAG00000034770) #18	ATP2C2 (ENSPPAG00000029149) #19	MEAK7 (ENSPPAG00000036424) #20	COTL1 (ENSPPAG00000033762) #21	KLHL36 (ENSPPAG00000035707) #22	USP10 (ENSPPAG00000026477) #23	CRISPLD2 (ENSPPAG00000007486) #24	ENSPPAG00000039541	ZDHHC7 (ENSPPAG00000038789) #25	KIAA0513 (ENSPPAG00000035287) #26	CIBAR2 (ENSPPAG00000029100) #27	GSE1 (ENSPPAG00000043223) #28	GINS2 (ENSPPAG00000042297) #29	ENSPPAG00000042677 #30	EMC8 (ENSPPAG00000042383) #31	COX4I1 (ENSPPAG00000040562) #32	ENSPPAG00000033468	IRF8 (ENSPPAG00000035056) #33	ENSPPAG00000030658	FOXF1 (ENSPPAG00000035527) #34
Human	MODERN SPECIES	7	HSBP1 (ENSG00000230989) #7	MLYCD (ENSG00000103150) #8	OSGIN1 (ENSG00000140961) #9	NECAB2 (ENSG00000103154) #10	SLC38A8 (ENSG00000166558) #11	MBTPS1 (ENSG00000140943) #12	HSDL1 (ENSG00000103160) #13	DNAAF1 (ENSG00000154099) #14	TAF1C (ENSG00000103168) #15	ADAD2 (ENSG00000140955) #16	KCNG4 (ENSG00000168418) #17	WFDC1 (ENSG00000103175) #18	ATP2C2 (ENSG00000064270) #19	MEAK7 (ENSG00000140950) #20	COTL1 (ENSG00000103187) #21	KLHL36 (ENSG00000135686) #22	USP10 (ENSG00000103194) #23	CRISPLD2 (ENSG00000103196) #24	ZDHHC7 (ENSG00000153786) #25	KIAA0513 (ENSG00000135709) #26	CIBAR2 (ENSG00000153789) #27	GSE1 (ENSG00000131149) #28	GINS2 (ENSG00000131153) #29	C16orf74 (ENSG00000154102) #30	EMC8 (ENSG00000131148) #31	COX4I1 (ENSG00000131143) #32	IRF8 (ENSG00000140968) #33	FOXF1 (ENSG00000103241) #34	MTHFSD (ENSG00000103248) #35	FOXC2 (ENSG00000176692) #36	FOXL1 (ENSG00000176678) #37
Gorilla	MODERN SPECIES	7	ENSGGOG00000036564 #7	MLYCD (ENSGGOG00000008007) #8	SLC38A8 (ENSGGOG00000003919) #11	MBTPS1 (ENSGGOG00000010784) #12	HSDL1 (ENSGGOG00000016026) #13	DNAAF1 (ENSGGOG00000000941) #14	ENSGGOG00000043727 #14	TAF1C (ENSGGOG00000000942) #15	ADAD2 (ENSGGOG00000000944) #16	ENSGGOG00000022999	KCNG4 (ENSGGOG00000001556) #17	WFDC1 (ENSGGOG00000013828) #18	ATP2C2 (ENSGGOG00000015486) #19	MEAK7 (ENSGGOG00000000868) #20	COTL1 (ENSGGOG00000036489) #21	KLHL36 (ENSGGOG00000012990) #22	USP10 (ENSGGOG00000012792) #23	ENSGGOG00000041544 #23	CRISPLD2 (ENSGGOG00000002690) #24	ZDHHC7 (ENSGGOG00000016638) #25	KIAA0513 (ENSGGOG00000016647) #26	CIBAR2 (ENSGGOG00000016658) #27	GSE1 (ENSGGOG00000009055) #28	GINS2 (ENSGGOG00000009069) #29	C16orf74 (ENSGGOG00000009075) #30	EMC8 (ENSGGOG00000016978) #31	COX4I1 (ENSGGOG00000010047) #32	ENSGGOG00000027388	IRF8 (ENSGGOG00000028251) #33	ENSGGOG00000005492	ENSGGOG00000025357 #34
Orangutan	MODERN SPECIES	7	MLYCD (ENSPPYG00000007594) #8	OSGIN1 (ENSPPYG00000007595) #9	NECAB2 (ENSPPYG00000007596) #10	SLC38A8 (ENSPPYG00000007697) #11	MBTPS1 (ENSPPYG00000007597) #12	HSDL1 (ENSPPYG00000007598) #13	DNAAF1 (ENSPPYG00000007599) #14	TAF1C (ENSPPYG00000007600) #15	ADAD2 (ENSPPYG00000007601) #16	ENSPPYG00000007602	KCNG4 (ENSPPYG00000007603) #17	WFDC1 (ENSPPYG00000007604) #18	ATP2C2 (ENSPPYG00000007605) #19	MEAK7 (ENSPPYG00000007606) #20	COTL1 (ENSPPYG00000033065) #21	KLHL36 (ENSPPYG00000007608) #22	USP10 (ENSPPYG00000007609) #23	CRISPLD2 (ENSPPYG00000007610) #24	ZDHHC7 (ENSPPYG00000007611) #25	KIAA0513 (ENSPPYG00000007612) #26	CIBAR2 (ENSPPYG00000007613) #27	GSE1 (ENSPPYG00000007615) #28	GINS2 (ENSPPYG00000034717) #29	ENSPPYG00000007617 #30	EMC8 (ENSPPYG00000007618) #31	COX4I1 (ENSPPYG00000007619) #32	IRF8 (ENSPPYG00000007620) #33	ENSPPYG00000030770	FOXF1 (ENSPPYG00000007623) #34	MTHFSD (ENSPPYG00000007624) #35	FOXC2 (ENSPPYG00000031888) #36
Gibbon	MODERN SPECIES	11	MLYCD (ENSNLEG00000029910) #8	ENSNLEG00000010850 #9	ENSNLEG00000010863 #10	SLC38A8 (ENSNLEG00000010885) #11	MBTPS1 (ENSNLEG00000010901) #12	HSDL1 (ENSNLEG00000010992) #13	ENSNLEG00000010993 #14	ENSNLEG00000011015 #15	ADAD2 (ENSNLEG00000011048) #16	ENSNLEG00000035466	KCNG4 (ENSNLEG00000011093) #17	WFDC1 (ENSNLEG00000011098) #18	ATP2C2 (ENSNLEG00000011126) #19	MEAK7 (ENSNLEG00000011220) #20	ENSNLEG00000011242 #21	ENSNLEG00000011244 #22	USP10 (ENSNLEG00000011245) #23	CRISPLD2 (ENSNLEG00000011301) #24	ENSNLEG00000027096	ZDHHC7 (ENSNLEG00000011337) #25	KIAA0513 (ENSNLEG00000011364) #26	ENSNLEG00000011369 #27	GSE1 (ENSNLEG00000011377) #28	ENSNLEG00000032939 #29	C16orf74 (ENSNLEG00000011399) #30	EMC8 (ENSNLEG00000011401) #31	ENSNLEG00000028334 #32	IRF8 (ENSNLEG00000011429) #33	ENSNLEG00000011449 #34	MTHFSD (ENSNLEG00000035790) #35	ENSNLEG00000028606
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00390000010578	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00970000197463	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00550000076295	ENSGT00940000161035 #34	ENSGT00390000011730 #35
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00390000010578	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994.o #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00970000197463	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.e.b #32	ENSGT00940000158140 #33	ENSGT00550000076295	ENSGT00940000161035 #34	ENSGT00390000011730 #35
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00390000010578	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994.o #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.e.b.a.a #32	ENSGT00390000002407.d.e.b.b #32	ENSGT00940000158140 #33	ENSGT00550000076295	ENSGT00940000161035 #34	ENSGT00390000011730 #35
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00390000010578	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994.o #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.e.b.b #32	ENSGT00940000158140 #33	ENSGT00550000076295	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Olive baboon	MODERN SPECIES	9	ENSPANG00000029444 #7	MLYCD (ENSPANG00000010882) #8	OSGIN1 (ENSPANG00000017404) #9	NECAB2 (ENSPANG00000015946) #10	SLC38A8 (ENSPANG00000015582) #11	MBTPS1 (ENSPANG00000010333) #12	HSDL1 (ENSPANG00000026306) #13	DNAAF1 (ENSPANG00000025135) #14	TAF1C (ENSPANG00000023897) #15	ADAD2 (ENSPANG00000010332) #16	KCNG4 (ENSPANG00000020358) #17	WFDC1 (ENSPANG00000021834) #18	ATP2C2 (ENSPANG00000021835) #19	MEAK7 (ENSPANG00000021837) #20	COTL1 (ENSPANG00000021500) #21	KLHL36 (ENSPANG00000001078) #22	USP10 (ENSPANG00000007753) #23	CRISPLD2 (ENSPANG00000015945) #24	ZDHHC7 (ENSPANG00000007352) #25	KIAA0513 (ENSPANG00000025133) #26	CIBAR2 (ENSPANG00000015894) #27	GSE1 (ENSPANG00000010331) #28	GINS2 (ENSPANG00000020355) #29	C16orf74 (ENSPANG00000030062) #30	ENSPANG00000042376 #31	ENSPANG00000010330 #32	IRF8 (ENSPANG00000024770) #33	FOXF1 (ENSPANG00000006104) #34	MTHFSD (ENSPANG00000021729) #35	FOXC2 (ENSPANG00000044176) #36	FOXL1 (ENSPANG00000037966) #37
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00390000010578	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994.o #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.e.b.b #32	ENSGT00940000158140 #33	ENSGT00550000076295	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Sooty mangabey	MODERN SPECIES	96	HSBP1 (ENSCATG00000039295) #7	MLYCD (ENSCATG00000043712) #8	OSGIN1 (ENSCATG00000033225) #9	NECAB2 (ENSCATG00000032136) #10	SLC38A8 (ENSCATG00000044234) #11	MBTPS1 (ENSCATG00000018824) #12	HSDL1 (ENSCATG00000030136) #13	DNAAF1 (ENSCATG00000032622) #14	TAF1C (ENSCATG00000030347) #15	ADAD2 (ENSCATG00000032653) #16	KCNG4 (ENSCATG00000043070) #17	WFDC1 (ENSCATG00000039596) #18	ATP2C2 (ENSCATG00000039816) #19	MEAK7 (ENSCATG00000039082) #20	COTL1 (ENSCATG00000033835) #21	KLHL36 (ENSCATG00000034305) #22	ENSCATG00000034771 #23	CRISPLD2 (ENSCATG00000039537) #24	ZDHHC7 (ENSCATG00000034960) #25	KIAA0513 (ENSCATG00000035707) #26	CIBAR2 (ENSCATG00000032699) #27	GSE1 (ENSCATG00000041449) #28	GINS2 (ENSCATG00000043722) #29	C16orf74 (ENSCATG00000029585) #30	EMC8 (ENSCATG00000044546) #31	ENSCATG00000031532 #32	IRF8 (ENSCATG00000027145) #33	ENSCATG00000033238	FOXF1 (ENSCATG00000032711) #34	MTHFSD (ENSCATG00000029682) #35	FOXC2 (ENSCATG00000022325) #36
Drill	MODERN SPECIES	66	OSGIN1 (ENSMLEG00000044302) #9	NECAB2 (ENSMLEG00000027954) #10	SLC38A8 (ENSMLEG00000036473) #11	MBTPS1 (ENSMLEG00000035515) #12	ENSMLEG00000004820	HSDL1 (ENSMLEG00000031523) #13	DNAAF1 (ENSMLEG00000044431) #14	TAF1C (ENSMLEG00000034090) #15	ADAD2 (ENSMLEG00000042324) #16	ENSMLEG00000041690	KCNG4 (ENSMLEG00000038398) #17	WFDC1 (ENSMLEG00000042257) #18	ATP2C2 (ENSMLEG00000031996) #19	MEAK7 (ENSMLEG00000042758) #20	COTL1 (ENSMLEG00000036500) #21	KLHL36 (ENSMLEG00000033841) #22	USP10 (ENSMLEG00000007117) #23	CRISPLD2 (ENSMLEG00000035937) #24	ZDHHC7 (ENSMLEG00000042990) #25	KIAA0513 (ENSMLEG00000042463) #26	CIBAR2 (ENSMLEG00000020683) #27	GSE1 (ENSMLEG00000037992) #28	GINS2 (ENSMLEG00000032478) #29	C16orf74 (ENSMLEG00000028479) #30	EMC8 (ENSMLEG00000033469) #31	ENSMLEG00000042590 #32	IRF8 (ENSMLEG00000042424) #33	ENSMLEG00000034560	MTHFSD (ENSMLEG00000034717) #35	ENSMLEG00000036487 #36	FOXL1 (ENSMLEG00000025792) #37
Macaca	ANCESTRAL SPECIES	8	ENSGT00390000006293.fd #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994.o #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.e.b.a.a #32	ENSGT00940000158140 #33	ENSGT00550000076295	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Pig-tailed macaque	MODERN SPECIES	238	MLYCD (ENSMNEG00000034381) #8	OSGIN1 (ENSMNEG00000036976) #9	NECAB2 (ENSMNEG00000038164) #10	SLC38A8 (ENSMNEG00000041256) #11	MBTPS1 (ENSMNEG00000035987) #12	HSDL1 (ENSMNEG00000033136) #13	DNAAF1 (ENSMNEG00000035067) #14	TAF1C (ENSMNEG00000034265) #15	ADAD2 (ENSMNEG00000036258) #16	KCNG4 (ENSMNEG00000038529) #17	WFDC1 (ENSMNEG00000044318) #18	ATP2C2 (ENSMNEG00000044532) #19	ENSMNEG00000001887	MEAK7 (ENSMNEG00000039145) #20	COTL1 (ENSMNEG00000044756) #21	KLHL36 (ENSMNEG00000029443) #22	ENSMNEG00000024456 #23	CRISPLD2 (ENSMNEG00000032612) #24	ZDHHC7 (ENSMNEG00000030031) #25	KIAA0513 (ENSMNEG00000031045) #26	CIBAR2 (ENSMNEG00000028674) #27	GSE1 (ENSMNEG00000042961) #28	GINS2 (ENSMNEG00000029368) #29	C16orf74 (ENSMNEG00000044821) #30	EMC8 (ENSMNEG00000029624) #31	COX4I1 (ENSMNEG00000030979) #32	IRF8 (ENSMNEG00000028544) #33	ENSMNEG00000028651
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000161627.a.a.a.b.b.b.b.a.b.a.a.a.a.b.a	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.b.a.b.b.b.b.b.a.a.a.b.a.a.a	ENSGT00940000158087 #20	ENSGT00940000161627.a.a.a.b.a.b.b.a.a.a	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994.o #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT01100000263493.a.b.b.a.b.a.a.a.b.b	ENSGT00940000161627.b.a.b.a.b.a.b	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.e.b.a.a #32	ENSGT01080000257579.b.b.b.b	ENSGT00940000158140 #33	ENSGT00550000076295
Crab-eating macaque	MODERN SPECIES	12	MBTPS1 (ENSMFAG00000032326) #12	HSDL1 (ENSMFAG00000041105) #13	ENSMFAG00000050749	DNAAF1 (ENSMFAG00000039701) #14	TAF1C (ENSMFAG00000003245) #15	ADAD2 (ENSMFAG00000044274) #16	ENSMFAG00000064270	KCNG4 (ENSMFAG00000044144) #17	WFDC1 (ENSMFAG00000059724) #18	ATP2C2 (ENSMFAG00000041363) #19	ENSMFAG00000047346	MEAK7 (ENSMFAG00000040862) #20	ENSMFAG00000065283	COTL1 (ENSMFAG00000063714) #21	ENSMFAG00000064856	KLHL36 (ENSMFAG00000045556) #22	USP10 (ENSMFAG00000003073) #23	CRISPLD2 (ENSMFAG00000012467) #24	ZDHHC7 (ENSMFAG00000042544) #25	KIAA0513 (ENSMFAG00000024723) #26	CIBAR2 (ENSMFAG00000040673) #27	ENSMFAG00000053025	GSE1 (ENSMFAG00000041181) #28	ENSMFAG00000054281	GINS2 (ENSMFAG00000002508) #29	ENSMFAG00000065597	ENSMFAG00000058022	EMC8 (ENSMFAG00000034372) #31	COX4I1 (ENSMFAG00000034477) #32	ENSMFAG00000058194	IRF8 (ENSMFAG00000031542) #33
Vervet Monkey	MODERN SPECIES	24	CDH13 (ENSCSAG00000003407)	MLYCD (ENSCSAG00000003401) #8	OSGIN1 (ENSCSAG00000003392) #9	NECAB2 (ENSCSAG00000003387) #10	SLC38A8 (ENSCSAG00000003381) #11	MBTPS1 (ENSCSAG00000003375) #12	HSDL1 (ENSCSAG00000003370) #13	DNAAF1 (ENSCSAG00000003365) #14	TAF1C (ENSCSAG00000003346) #15	ADAD2 (ENSCSAG00000003310) #16	KCNG4 (ENSCSAG00000003301) #17	WFDC1 (ENSCSAG00000003296) #18	ATP2C2 (ENSCSAG00000003253) #19	MEAK7 (ENSCSAG00000003194) #20	COTL1 (ENSCSAG00000003191) #21	KLHL36 (ENSCSAG00000003184) #22	USP10 (ENSCSAG00000003178) #23	CRISPLD2 (ENSCSAG00000003164) #24	ZDHHC7 (ENSCSAG00000003161) #25	KIAA0513 (ENSCSAG00000003160) #26	CIBAR2 (ENSCSAG00000003158) #27	ENSCSAG00000003152	GSE1 (ENSCSAG00000003150) #28	GINS2 (ENSCSAG00000003148) #29	C16orf74 (ENSCSAG00000003147) #30	EMC8 (ENSCSAG00000003145) #31	COX4I1 (ENSCSAG00000003144) #32	IRF8 (ENSCSAG00000003142) #33	FOXF1 (ENSCSAG00000003141) #34	MTHFSD (ENSCSAG00000003139) #35	FOXC2 (ENSCSAG00000018476) #36
Rhinopithecus	ANCESTRAL SPECIES	22	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00910000147453	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838.o.a.b #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d.c #32	ENSGT00940000158140 #33	ENSGT00550000076295	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Black snub-nosed monkey	MODERN SPECIES	172	MLYCD (ENSRBIG00000029601) #8	OSGIN1 (ENSRBIG00000028105) #9	NECAB2 (ENSRBIG00000043456) #10	SLC38A8 (ENSRBIG00000033048) #11	MBTPS1 (ENSRBIG00000024584) #12	HSDL1 (ENSRBIG00000006504) #13	DNAAF1 (ENSRBIG00000033777) #14	TAF1C (ENSRBIG00000015058) #15	ADAD2 (ENSRBIG00000040564) #16	KCNG4 (ENSRBIG00000028976) #17	WFDC1 (ENSRBIG00000039192) #18	ENSRBIG00000034030	ATP2C2 (ENSRBIG00000040391) #19	MEAK7 (ENSRBIG00000031034) #20	COTL1 (ENSRBIG00000044789) #21	KLHL36 (ENSRBIG00000038474) #22	USP10 (ENSRBIG00000038865) #23	CRISPLD2 (ENSRBIG00000020153) #24	ZDHHC7 (ENSRBIG00000037918) #25	KIAA0513 (ENSRBIG00000031604) #26	CIBAR2 (ENSRBIG00000034906) #27	GSE1 (ENSRBIG00000033119) #28	ENSRBIG00000035213 #29	C16orf74 (ENSRBIG00000043760) #30	EMC8 (ENSRBIG00000035063) #31	COX4I1 (ENSRBIG00000032596) #32	IRF8 (ENSRBIG00000040015) #33	ENSRBIG00000022447	FOXF1 (ENSRBIG00000044551) #34	MTHFSD (ENSRBIG00000043280) #35	FOXL1 (ENSRBIG00000017663) #37
Golden snub-nosed monkey	MODERN SPECIES	3015	MLYCD (ENSRROG00000039509) #8	OSGIN1 (ENSRROG00000045773) #9	NECAB2 (ENSRROG00000042374) #10	SLC38A8 (ENSRROG00000040434) #11	MBTPS1 (ENSRROG00000041214) #12	HSDL1 (ENSRROG00000029911) #13	DNAAF1 (ENSRROG00000040439) #14	TAF1C (ENSRROG00000036179) #15	ADAD2 (ENSRROG00000030471) #16	KCNG4 (ENSRROG00000031551) #17	WFDC1 (ENSRROG00000045390) #18	ENSRROG00000011573	ATP2C2 (ENSRROG00000029475) #19	MEAK7 (ENSRROG00000017225) #20	COTL1 (ENSRROG00000029633) #21	KLHL36 (ENSRROG00000031015) #22	USP10 (ENSRROG00000005451) #23	CRISPLD2 (ENSRROG00000038410) #24	ZDHHC7 (ENSRROG00000045151) #25	KIAA0513 (ENSRROG00000042442) #26	CIBAR2 (ENSRROG00000045629) #27	GSE1 (ENSRROG00000044045) #28	ENSRROG00000040370 #29	C16orf74 (ENSRROG00000040651) #30	EMC8 (ENSRROG00000028660) #31	ENSRROG00000039551 #32	IRF8 (ENSRROG00000040814) #33	ENSRROG00000030070	FOXF1 (ENSRROG00000024990) #34	MTHFSD (ENSRROG00000045411) #35	FOXC2 (ENSRROG00000005453) #36
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00390000009077.ib	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a.m #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Cebidae	ANCESTRAL SPECIES	21	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00390000009077.ib	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a.m #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Marmoset	MODERN SPECIES	12	HSBP1 (ENSCJAG00000047707) #7	MLYCD (ENSCJAG00000000633) #8	OSGIN1 (ENSCJAG00000083606) #9	NECAB2 (ENSCJAG00000003789) #10	ENSCJAG00000003812 #11	MBTPS1 (ENSCJAG00000003829) #12	HSDL1 (ENSCJAG00000003920) #13	DNAAF1 (ENSCJAG00000003933) #14	TAF1C (ENSCJAG00000003961) #15	ADAD2 (ENSCJAG00000003981) #16	ENSCJAG00000003994 #17	WFDC1 (ENSCJAG00000013707) #18	ATP2C2 (ENSCJAG00000004001) #19	MEAK7 (ENSCJAG00000004046) #20	COTL1 (ENSCJAG00000047974) #21	KLHL36 (ENSCJAG00000004060) #22	USP10 (ENSCJAG00000004067) #23	CRISPLD2 (ENSCJAG00000004090) #24	ENSCJAG00000076591	ZDHHC7 (ENSCJAG00000004119) #25	KIAA0513 (ENSCJAG00000004127) #26	ENSCJAG00000086310	GSE1 (ENSCJAG00000017301) #28	GINS2 (ENSCJAG00000075149) #29	ENSCJAG00000086831 #30	EMC8 (ENSCJAG00000072941) #31	COX4I1 (ENSCJAG00000017319) #32	IRF8 (ENSCJAG00000017331) #33	FOXF1 (ENSCJAG00000041793) #34	MTHFSD (ENSCJAG00000017146) #35	FOXC2 (ENSCJAG00000017143) #36
Cebidae_a	ANCESTRAL SPECIES	51	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00390000009077.ib	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519.k #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a.m #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Bolivian squirrel monkey	MODERN SPECIES	48	IL1R2 (ENSSBOG00000031088)	MLYCD (ENSSBOG00000026561) #8	OSGIN1 (ENSSBOG00000015181) #9	NECAB2 (ENSSBOG00000030829) #10	SLC38A8 (ENSSBOG00000024465) #11	MBTPS1 (ENSSBOG00000036235) #12	HSDL1 (ENSSBOG00000022239) #13	DNAAF1 (ENSSBOG00000033974) #14	TAF1C (ENSSBOG00000034047) #15	ADAD2 (ENSSBOG00000017902) #16	KCNG4 (ENSSBOG00000017598) #17	WFDC1 (ENSSBOG00000023575) #18	ATP2C2 (ENSSBOG00000006872) #19	MEAK7 (ENSSBOG00000028533) #20	ENSSBOG00000032622 #21	KLHL36 (ENSSBOG00000033614) #22	USP10 (ENSSBOG00000004163) #23	ENSSBOG00000031791	CRISPLD2 (ENSSBOG00000034322) #24	ZDHHC7 (ENSSBOG00000008336) #25	KIAA0513 (ENSSBOG00000036003) #26	CIBAR2 (ENSSBOG00000027622) #27	GSE1 (ENSSBOG00000019382) #28	GINS2 (ENSSBOG00000029439) #29	C16orf74 (ENSSBOG00000032366) #30	EMC8 (ENSSBOG00000029850) #31	COX4I1 (ENSSBOG00000030668) #32	IRF8 (ENSSBOG00000034631) #33	FOXF1 (ENSSBOG00000021248) #34	MTHFSD (ENSSBOG00000033851) #35	ENSSBOG00000035383
Capuchin	MODERN SPECIES	159	HSBP1 (ENSCCAG00000017468) #7	MLYCD (ENSCCAG00000036981) #8	OSGIN1 (ENSCCAG00000023095) #9	NECAB2 (ENSCCAG00000019973) #10	SLC38A8 (ENSCCAG00000021790) #11	MBTPS1 (ENSCCAG00000026444) #12	HSDL1 (ENSCCAG00000020554) #13	DNAAF1 (ENSCCAG00000026959) #14	TAF1C (ENSCCAG00000030756) #15	ADAD2 (ENSCCAG00000020693) #16	KCNG4 (ENSCCAG00000032366) #17	WFDC1 (ENSCCAG00000023185) #18	ATP2C2 (ENSCCAG00000020930) #19	MEAK7 (ENSCCAG00000028854) #20	ENSCCAG00000032654 #21	KLHL36 (ENSCCAG00000029345) #22	ENSCCAG00000031361	USP10 (ENSCCAG00000020200) #23	ENSCCAG00000000464	CRISPLD2 (ENSCCAG00000030845) #24	ZDHHC7 (ENSCCAG00000037279) #25	KIAA0513 (ENSCCAG00000026703) #26	CIBAR2 (ENSCCAG00000035866) #27	GSE1 (ENSCCAG00000023752) #28	GINS2 (ENSCCAG00000024580) #29	C16orf74 (ENSCCAG00000000225) #30	EMC8 (ENSCCAG00000025936) #31	COX4I1 (ENSCCAG00000032992) #32	IRF8 (ENSCCAG00000017098) #33	FOXF1 (ENSCCAG00000023946) #34	MTHFSD (ENSCCAG00000023314) #35
Mas night monkey	MODERN SPECIES	517	OSGIN1 (ENSANAG00000010277) #9	NECAB2 (ENSANAG00000034372) #10	SLC38A8 (ENSANAG00000026554) #11	ENSANAG00000023392	MBTPS1 (ENSANAG00000037655) #12	HSDL1 (ENSANAG00000025556) #13	DNAAF1 (ENSANAG00000035919) #14	TAF1C (ENSANAG00000037334) #15	ENSANAG00000035116	ADAD2 (ENSANAG00000021501) #16	KCNG4 (ENSANAG00000038056) #17	WFDC1 (ENSANAG00000030155) #18	ATP2C2 (ENSANAG00000021932) #19	MEAK7 (ENSANAG00000037570) #20	ENSANAG00000020703 #21	KLHL36 (ENSANAG00000037280) #22	ENSANAG00000019582	USP10 (ENSANAG00000025133) #23	CRISPLD2 (ENSANAG00000027214) #24	ZDHHC7 (ENSANAG00000029724) #25	KIAA0513 (ENSANAG00000020428) #26	CIBAR2 (ENSANAG00000034815) #27	GSE1 (ENSANAG00000028099) #28	GINS2 (ENSANAG00000035597) #29	C16orf74 (ENSANAG00000033611) #30	EMC8 (ENSANAG00000032653) #31	COX4I1 (ENSANAG00000022720) #32	IRF8 (ENSANAG00000036367) #33	FOXF1 (ENSANAG00000033717) #34	MTHFSD (ENSANAG00000006858) #35	FOXC2 (ENSANAG00000037594) #36
Tarsier	MODERN SPECIES	842																KLHL36 (ENSTSYG00000009180) #22
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a.h #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Bushbaby	MODERN SPECIES	162	MLYCD (ENSOGAG00000009296) #8	OSGIN1 (ENSOGAG00000034472) #9	NECAB2 (ENSOGAG00000009297) #10	SLC38A8 (ENSOGAG00000009301) #11	MBTPS1 (ENSOGAG00000009308) #12	HSDL1 (ENSOGAG00000009323) #13	DNAAF1 (ENSOGAG00000009325) #14	TAF1C (ENSOGAG00000009329) #15	ADAD2 (ENSOGAG00000009335) #16	KCNG4 (ENSOGAG00000009347) #17	WFDC1 (ENSOGAG00000009348) #18	ATP2C2 (ENSOGAG00000009350) #19	ENSOGAG00000026671 #20	COTL1 (ENSOGAG00000009363) #21	ENSOGAG00000029626	KLHL36 (ENSOGAG00000009367) #22	ENSOGAG00000009372 #23	CRISPLD2 (ENSOGAG00000009377) #24	ZDHHC7 (ENSOGAG00000009384) #25	KIAA0513 (ENSOGAG00000009254) #26	CIBAR2 (ENSOGAG00000009389) #27	ENSOGAG00000013802 #28
Lemuriformes	ANCESTRAL SPECIES	51	ENSGT00390000006293.yc #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a.h #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Mouse lemur	MODERN SPECIES	12	CHRNA6 (ENSMICG00000010715)	CHRNB3 (ENSMICG00000010710)	SMIM19 (ENSMICG00000015429)	SLC20A2 (ENSMICG00000033847)	THAP1 (ENSMICG00000041721)	RNF170 (ENSMICG00000031451)	HOOK3 (ENSMICG00000001083)	ENSMICG00000014757	POMK (ENSMICG00000046380)	HGSNAT (ENSMICG00000006908)	PLCG2 (ENSMICG00000015143)	WFDC1 (ENSMICG00000012406) #18	ATP2C2 (ENSMICG00000004563) #19	MEAK7 (ENSMICG00000004583) #20	COTL1 (ENSMICG00000045006) #21	KLHL36 (ENSMICG00000001726) #22	OSGIN1 (ENSMICG00000037758) #9	CMIP (ENSMICG00000009908)	SDR42E1 (ENSMICG00000015171)	HSD17B2 (ENSMICG00000037784)	MPHOSPH6 (ENSMICG00000031381)	CDH13 (ENSMICG00000007003)	ENSMICG00000035467 #7	MLYCD (ENSMICG00000036220) #8	NECAB2 (ENSMICG00000012291) #10	SLC38A8 (ENSMICG00000012295) #11	MBTPS1 (ENSMICG00000012306) #12	HSDL1 (ENSMICG00000012329) #13	DNAAF1 (ENSMICG00000012338) #14	TAF1C (ENSMICG00000012355) #15	ADAD2 (ENSMICG00000012378) #16
Lemuriformes_a	ANCESTRAL SPECIES	55	ENSGT00390000006293.yc #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a.h #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00940000162251 #37
Greater bamboo lemur	MODERN SPECIES	175												WFDC1 (ENSPSMG00000007552) #18	ATP2C2 (ENSPSMG00000007577) #19	MEAK7 (ENSPSMG00000007606) #20	COTL1 (ENSPSMG00000007618) #21	KLHL36 (ENSPSMG00000007630) #22	USP10 (ENSPSMG00000007686) #23	CRISPLD2 (ENSPSMG00000007743) #24	ZDHHC7 (ENSPSMG00000007762) #25	KIAA0513 (ENSPSMG00000007876) #26	CIBAR2 (ENSPSMG00000007904) #27	GSE1 (ENSPSMG00000007967) #28	GINS2 (ENSPSMG00000007989) #29	C16orf74 (ENSPSMG00000008029) #30	EMC8 (ENSPSMG00000008056) #31	COX4I1 (ENSPSMG00000008079) #32	IRF8 (ENSPSMG00000008092) #33	FOXF1 (ENSPSMG00000008099) #34	MTHFSD (ENSPSMG00000008146) #35	FOXC2 (ENSPSMG00000008184) #36	FOXL1 (ENSPSMG00000008188) #37
Coquerels sifaka	MODERN SPECIES	399	MLYCD (ENSPCOG00000014205) #8	OSGIN1 (ENSPCOG00000017513) #9	NECAB2 (ENSPCOG00000018699) #10	SLC38A8 (ENSPCOG00000001606) #11	MBTPS1 (ENSPCOG00000024773) #12	HSDL1 (ENSPCOG00000001727) #13	ENSPCOG00000027210 #14	ENSPCOG00000027214 #15	ENSPCOG00000021503 #15	ADAD2 (ENSPCOG00000016890) #16	KCNG4 (ENSPCOG00000025699) #17	WFDC1 (ENSPCOG00000024254) #18	ATP2C2 (ENSPCOG00000004491) #19	MEAK7 (ENSPCOG00000012727) #20	COTL1 (ENSPCOG00000025715) #21	KLHL36 (ENSPCOG00000018884) #22	USP10 (ENSPCOG00000013858) #23	CRISPLD2 (ENSPCOG00000025280) #24	ZDHHC7 (ENSPCOG00000028761) #25	KIAA0513 (ENSPCOG00000006397) #26	CIBAR2 (ENSPCOG00000021246) #27
Atlantogenata	ANCESTRAL SPECIES	52	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00390000001368
Xenarthra	ANCESTRAL SPECIES	756															ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27
Armadillo	MODERN SPECIES	2371															COTL1 (ENSDNOG00000000083) #21	KLHL36 (ENSDNOG00000010475) #22	USP10 (ENSDNOG00000040515) #23	CRISPLD2 (ENSDNOG00000015162) #24	ZDHHC7 (ENSDNOG00000048648) #25	KIAA0513 (ENSDNOG00000006605) #26	CIBAR2 (ENSDNOG00000011484) #27
Sloth	MODERN SPECIES	12517																KLHL36 (ENSCHOG00000000568) #22
Afrotheria	ANCESTRAL SPECIES	50	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36	ENSGT00390000001368
Tenrec	MODERN SPECIES	11051																KLHL36 (ENSETEG00000013357) #22
Afrotheria_a	ANCESTRAL SPECIES	94	ENSGT00390000006293 #7	ENSGT00390000005410 #8	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Elephant	MODERN SPECIES	458	ENSLAFG00000014112 #7	MLYCD (ENSLAFG00000008543) #8	OSGIN1 (ENSLAFG00000029645) #9	NECAB2 (ENSLAFG00000006053) #10	SLC38A8 (ENSLAFG00000006058) #11	MBTPS1 (ENSLAFG00000006060) #12	HSDL1 (ENSLAFG00000017715) #13	DNAAF1 (ENSLAFG00000006065) #14	TAF1C (ENSLAFG00000006068) #15	ADAD2 (ENSLAFG00000006071) #16	KCNG4 (ENSLAFG00000006080) #17	WFDC1 (ENSLAFG00000005149) #18	ATP2C2 (ENSLAFG00000017225) #19	MEAK7 (ENSLAFG00000030108) #20	COTL1 (ENSLAFG00000032427) #21	KLHL36 (ENSLAFG00000014020) #22	USP10 (ENSLAFG00000014025) #23	CRISPLD2 (ENSLAFG00000002052) #24	ZDHHC7 (ENSLAFG00000003220) #25	KIAA0513 (ENSLAFG00000018684) #26	CIBAR2 (ENSLAFG00000018688) #27	GSE1 (ENSLAFG00000011011) #28	GINS2 (ENSLAFG00000011019) #29	C16orf74 (ENSLAFG00000011435) #30	EMC8 (ENSLAFG00000011023) #31	COX4I1 (ENSLAFG00000014002) #32	IRF8 (ENSLAFG00000010973) #33	FOXF1 (ENSLAFG00000002036) #34	MTHFSD (ENSLAFG00000002037) #35	FOXC2 (ENSLAFG00000012537) #36	ENSLAFG00000013834
Hyrax	MODERN SPECIES	9122																KLHL36 (ENSPCAG00000013693) #22
Marsupialia	ANCESTRAL SPECIES	17	ENSGT00940000156879	ENSGT00400000022168.b	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Opossum	MODERN SPECIES		SMPD3 (ENSMODG00000005091)	OSGIN1 (ENSMODG00000005049) #9	NECAB2 (ENSMODG00000005038) #10	SLC38A8 (ENSMODG00000005002) #11	MBTPS1 (ENSMODG00000004990) #12	HSDL1 (ENSMODG00000004950) #13	ENSMODG00000004944 #14	ENSMODG00000004921 #15	ENSMODG00000038903	ENSMODG00000004888 #16	KCNG4 (ENSMODG00000004854) #17	WFDC1 (ENSMODG00000004832) #18	ATP2C2 (ENSMODG00000004827) #19	ENSMODG00000004773 #20	COTL1 (ENSMODG00000004760) #21	KLHL36 (ENSMODG00000004755) #22	ENSMODG00000004726 #23	ENSMODG00000045210	CRISPLD2 (ENSMODG00000004706) #24	ENSMODG00000041238	ENSMODG00000004646 #25	KIAA0513 (ENSMODG00000004641) #26	CIBAR2 (ENSMODG00000004634) #27	GSE1 (ENSMODG00000004621) #28	GINS2 (ENSMODG00000004604) #29	C16orf74 (ENSMODG00000004599) #30	ENSMODG00000004596 #31	COX4I1 (ENSMODG00000004591) #32	ENSMODG00000044341 #33	ENSMODG00000004572 #33	FOXF1 (ENSMODG00000004542) #34
Marsupialia_b	ANCESTRAL SPECIES	19	ENSGT00940000156879	ENSGT00400000022168.b	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Diprotodontia	ANCESTRAL SPECIES	13	ENSGT00940000156879	ENSGT00400000022168.b	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
Diprotodontia_a	ANCESTRAL SPECIES	14	ENSGT00940000156879	ENSGT00400000022168.b	ENSGT00390000006658.b #9	ENSGT00950000183131.b.b #10	ENSGT00940000157764 #11	ENSGT00490000043404 #12	ENSGT00940000160053 #13	ENSGT00940000158494 #14	ENSGT00390000010767 #15	ENSGT00940000161900 #16	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00390000009535 #26	ENSGT00390000010285.d #27	ENSGT00700000104539.b.a #28	ENSGT00390000007838 #29	ENSGT00390000015933 #30	ENSGT00390000006738.a #31	ENSGT00390000002407.d #32	ENSGT00940000158140 #33	ENSGT00940000161035 #34	ENSGT00390000011730 #35	ENSGT00940000162619 #36
koala	MODERN SPECIES	34	PRMT7 (ENSPCIG00000014655)	SMPD3 (ENSPCIG00000028071)	OSGIN1 (ENSPCIG00000013611) #9	NECAB2 (ENSPCIG00000013605) #10	SLC38A8 (ENSPCIG00000013603) #11	MBTPS1 (ENSPCIG00000013598) #12	HSDL1 (ENSPCIG00000013594) #13	ENSPCIG00000037406 #14	ENSPCIG00000013591 #15	ADAD2 (ENSPCIG00000013589) #16	KCNG4 (ENSPCIG00000013548) #17	WFDC1 (ENSPCIG00000013547) #18	ATP2C2 (ENSPCIG00000013542) #19	MEAK7 (ENSPCIG00000013540) #20	COTL1 (ENSPCIG00000013538) #21	KLHL36 (ENSPCIG00000013535) #22	USP10 (ENSPCIG00000013527) #23	CRISPLD2 (ENSPCIG00000013522) #24	ENSPCIG00000013511	ZDHHC7 (ENSPCIG00000013509) #25	CIBAR2 (ENSPCIG00000013505) #27	KIAA0513 (ENSPCIG00000013502) #26	GSE1 (ENSPCIG00000004092) #28	GINS2 (ENSPCIG00000035341) #29	C16orf74 (ENSPCIG00000033796) #30	EMC8 (ENSPCIG00000004725) #31	COX4I1 (ENSPCIG00000004733) #32	IRF8 (ENSPCIG00000004752) #33	FOXF1 (ENSPCIG00000004771) #34	MTHFSD (ENSPCIG00000004783) #35	FOXC2 (ENSPCIG00000004805) #36
Common wonbat	MODERN SPECIES	312	PRMT7 (ENSVURG00010021239)	SMPD3 (ENSVURG00010021227)	OSGIN1 (ENSVURG00010021214) #9	NECAB2 (ENSVURG00010021179) #10	SLC38A8 (ENSVURG00010021166) #11	MBTPS1 (ENSVURG00010021151) #12	HSDL1 (ENSVURG00010021142) #13	ENSVURG00010021138 #14	TAF1C (ENSVURG00010021132) #15	ADAD2 (ENSVURG00010021127) #16	KCNG4 (ENSVURG00010021111) #17	WFDC1 (ENSVURG00010021102) #18	ATP2C2 (ENSVURG00010021073) #19	ENSVURG00010021056 #20	COTL1 (ENSVURG00010021049) #21	KLHL36 (ENSVURG00010021044) #22	USP10 (ENSVURG00010021040) #23	CRISPLD2 (ENSVURG00010021037) #24	ENSVURG00010021033	ZDHHC7 (ENSVURG00010021031) #25	KIAA0513 (ENSVURG00010021027) #26	ENSVURG00010021024 #27	GSE1 (ENSVURG00010020983) #28	GINS2 (ENSVURG00010020977) #29	C16orf74 (ENSVURG00010020974) #30	ENSVURG00010020971 #31	COX4I1 (ENSVURG00010020967) #32	IRF8 (ENSVURG00010020961) #33	FOXF1 (ENSVURG00010020956) #34	MTHFSD (ENSVURG00010020952) #35	FOXC2 (ENSVURG00010020950) #36
Wallaby	MODERN SPECIES	4161																KLHL36 (ENSMEUG00000011300) #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000005239	PRMT7 (ENSSHAG00000005506)	ENSSHAG00000006412	ENSSHAG00000011192 #9	ENSSHAG00000030685 #10	SLC38A8 (ENSSHAG00000011614) #11	MBTPS1 (ENSSHAG00000011918) #12	HSDL1 (ENSSHAG00000012287) #13	ENSSHAG00000012616 #15	ADAD2 (ENSSHAG00000012759) #16	KCNG4 (ENSSHAG00000012850) #17	ENSSHAG00000024221 #18	ATP2C2 (ENSSHAG00000003142) #19	ENSSHAG00000001945 #20	COTL1 (ENSSHAG00000023270) #21	KLHL36 (ENSSHAG00000005024) #22	USP10 (ENSSHAG00000006863) #23	CRISPLD2 (ENSSHAG00000022452) #24	ENSSHAG00000009578	ZDHHC7 (ENSSHAG00000010122) #25	KIAA0513 (ENSSHAG00000010630) #26	CIBAR2 (ENSSHAG00000011068) #27	GSE1 (ENSSHAG00000014934) #28	GINS2 (ENSSHAG00000020567) #29	EMC8 (ENSSHAG00000032043) #31	COX4I1 (ENSSHAG00000025027) #32	IRF8 (ENSSHAG00000023649) #33	ENSSHAG00000027984	FOXF1 (ENSSHAG00000012906) #34	MTHFSD (ENSSHAG00000013081) #35	FOXC2 (ENSSHAG00000028102) #36
Platypus	MODERN SPECIES	2	ENSOANG00000042481	GAN (ENSOANG00000009351)	PLCG2 (ENSOANG00000011330)	SDR42E1 (ENSOANG00000011331)	ENSOANG00000049044	ENSOANG00000011333	MPHOSPH6 (ENSOANG00000040792)	CDH13 (ENSOANG00000049837)	MLYCD (ENSOANG00000011336) #8	ENSOANG00000043261 #7	KCNG4 (ENSOANG00000044990) #17	WFDC1 (ENSOANG00000011339) #18	ATP2C2 (ENSOANG00000011340) #19	MEAK7 (ENSOANG00000011342) #20	COTL1 (ENSOANG00000011343) #21	KLHL36 (ENSOANG00000039074) #22	USP10 (ENSOANG00000011345) #23	CRISPLD2 (ENSOANG00000011346) #24	ENSOANG00000011349	ZDHHC7 (ENSOANG00000047960) #25	KIAA0513 (ENSOANG00000011353) #26	CIBAR2 (ENSOANG00000011354) #27	GSE1 (ENSOANG00000011355) #28	GINS2 (ENSOANG00000011357) #29	C16orf74 (ENSOANG00000050723) #30	EMC8 (ENSOANG00000044433) #31	COX4I1 (ENSOANG00000003744) #32	ENSOANG00000003742	IRF8 (ENSOANG00000003741) #33	FOXF1 (ENSOANG00000007633) #34	MTHFSD (ENSOANG00000003740) #35
Sauria	ANCESTRAL SPECIES	14	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00940000166270	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000172426	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT01030000239461	ENSGT01090000261337	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31
Archelosauria	ANCESTRAL SPECIES	16	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00940000166270	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000172426	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT01030000239461	ENSGT01090000261337	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31
Archosauria	ANCESTRAL SPECIES	14	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00940000166270	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT01030000239461	ENSGT01090000261337	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01030000235245
Aves	ANCESTRAL SPECIES	22	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT01030000239461	ENSGT01090000261337	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT00390000007838 #29
Neognathae	ANCESTRAL SPECIES	13	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT01030000239461	ENSGT01090000261337	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01040000241165
Galloanserae	ANCESTRAL SPECIES	12	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT01030000239461	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01040000241165	ENSGT00390000007838 #29
Phasianidae	ANCESTRAL SPECIES	12	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT01030000239461	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01040000241165	ENSGT00390000007838 #29
Phasianidae_b	ANCESTRAL SPECIES	14	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01040000241165	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Turkey	MODERN SPECIES	4	PLCG2 (ENSMGAG00000006882)	SDR42E1 (ENSMGAG00000006936)	HSD17B2 (ENSMGAG00000006940)	ENSMGAG00000015616	ENSMGAG00000015618	ENSMGAG00000022833	MPHOSPH6 (ENSMGAG00000006959)	CDH13 (ENSMGAG00000006976)	ENSMGAG00000006996 #8	ENSMGAG00000022249 #7	KCNG4 (ENSMGAG00000007008) #17	WFDC1 (ENSMGAG00000007013) #18	ATP2C2 (ENSMGAG00000007025) #19	MEAK7 (ENSMGAG00000007100) #20	COTL1 (ENSMGAG00000007104) #21	KLHL36 (ENSMGAG00000007117) #22	USP10 (ENSMGAG00000007125) #23	CRISPLD2 (ENSMGAG00000007172) #24	ENSMGAG00000007214	ZDHHC7 (ENSMGAG00000007256) #25	ENSMGAG00000015638	ENSMGAG00000009064	ENSMGAG00000009061	ENSMGAG00000020809	ENSMGAG00000009000	ENSMGAG00000015635	ENSMGAG00000008977	ENSMGAG00000008937	ENSMGAG00000008975	ENSMGAG00000020543	ENSMGAG00000008882
Chicken	MODERN SPECIES	2	PLCG2 (ENSGALG00010007393)	SDR42E1 (ENSGALG00010007403)	HSD17B2 (ENSGALG00010007439)	NAT (ENSGALG00010007432)	PNAT3 (ENSGALG00010007436)	PNAT10 (ENSGALG00010007465)	MPHOSPH6 (ENSGALG00010007500)	CDH13 (ENSGALG00010007529)	MLYCD (ENSGALG00010007544) #8	HSBP1 (ENSGALG00010007548) #7	KCNG4 (ENSGALG00010007585) #17	WFDC1 (ENSGALG00010007577) #18	ATP2C2 (ENSGALG00010007595) #19	TLDC1 (ENSGALG00010007610) #20	COTL1 (ENSGALG00010007643) #21	KLHL36 (ENSGALG00010007650) #22	USP10 (ENSGALG00010006558) #23	CRISPLD2 (ENSGALG00010006681) #24	HNF4beta (ENSGALG00010009021)	ZDHHC7 (ENSGALG00010009030) #25	FOXL1 (ENSGALG00010007155) #37	FOXC2 (ENSGALG00010007175) #36	MTHFSD (ENSGALG00010007214) #35	FOXF1 (ENSGALG00010007223) #34	IRF8 (ENSGALG00010006715) #33	ENSGALG00010006767	COX4I1 (ENSGALG00010006803) #32	EMC8 (ENSGALG00010006819) #31	ENSGALG00010006824	GINS2 (ENSGALG00010006840) #29	GSE1 (ENSGALG00010006877) #28
Japanese quail	MODERN SPECIES	2	PLCG2 (ENSCJPG00005014704)	SDR42E1 (ENSCJPG00005014705)	HSD17B2 (ENSCJPG00005014706)	ENSCJPG00005014708	ENSCJPG00005014709	ENSCJPG00005014710	MPHOSPH6 (ENSCJPG00005014711)	CDH13 (ENSCJPG00005014715)	MLYCD (ENSCJPG00005014717) #8	HSBP1 (ENSCJPG00005014719) #7	KCNG4 (ENSCJPG00005014720) #17	WFDC1 (ENSCJPG00005014721) #18	ATP2C2 (ENSCJPG00005014722) #19	MEAK7 (ENSCJPG00005014723) #20	COTL1 (ENSCJPG00005014725) #21	KLHL36 (ENSCJPG00005014726) #22	USP10 (ENSCJPG00005014727) #23	CRISPLD2 (ENSCJPG00005014728) #24	ENSCJPG00005014732	ZDHHC7 (ENSCJPG00005014733) #25	FOXL1 (ENSCJPG00005014737) #37	FOXC2 (ENSCJPG00005014738) #36	MTHFSD (ENSCJPG00005014739) #35	FOXF1 (ENSCJPG00005014740) #34	IRF8 (ENSCJPG00005014744) #33	ENSCJPG00005014745	ENSCJPG00005014746	COX4I1 (ENSCJPG00005014747) #32	EMC8 (ENSCJPG00005014748) #31	ENSCJPG00005014749	GINS2 (ENSCJPG00005014750) #29
Anatidae	ANCESTRAL SPECIES	17	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28	ENSGT00390000009535.d #26
Pink-footed goose	MODERN SPECIES	170	PLCG2 (ENSABRG00000014068)	SDR42E1 (ENSABRG00000014058)	HSD17B2 (ENSABRG00000014056)	ENSABRG00000014052	ENSABRG00000014051	ENSABRG00000014047	MPHOSPH6 (ENSABRG00000014044)	CDH13 (ENSABRG00000014023)	MLYCD (ENSABRG00000013999) #8	HSBP1 (ENSABRG00000013993) #7	KCNG4 (ENSABRG00000013988) #17	WFDC1 (ENSABRG00000013979) #18	ATP2C2 (ENSABRG00000013956) #19	MEAK7 (ENSABRG00000013946) #20	COTL1 (ENSABRG00000013931) #21	KLHL36 (ENSABRG00000013928) #22	USP10 (ENSABRG00000013925) #23	CRISPLD2 (ENSABRG00000013920) #24	ENSABRG00000013895	ZDHHC7 (ENSABRG00000013880) #25
Duck	MODERN SPECIES	3	PLCG2 (ENSAPLG00000010652)	SDR42E1 (ENSAPLG00000001581)	HSD17B2 (ENSAPLG00000001835)	ENSAPLG00000002080	ENSAPLG00000002085	ENSAPLG00000002088	MPHOSPH6 (ENSAPLG00000018311)	CDH13 (ENSAPLG00000002525)	MLYCD (ENSAPLG00000021334) #8	HSBP1 (ENSAPLG00000028761) #7	WFDC1 (ENSAPLG00000013371) #18	KCNG4 (ENSAPLG00000013390) #17	ATP2C2 (ENSAPLG00000012448) #19	MEAK7 (ENSAPLG00000012412) #20	COTL1 (ENSAPLG00000016644) #21	KLHL36 (ENSAPLG00000012341) #22	USP10 (ENSAPLG00000012121) #23	CRISPLD2 (ENSAPLG00000011940) #24	ENSAPLG00000011331	ZDHHC7 (ENSAPLG00000011224) #25	FOXL1 (ENSAPLG00000000883) #37	MTHFSD (ENSAPLG00000011022) #35	FOXF1 (ENSAPLG00000019903) #34	ENSAPLG00000021706 #33	ENSAPLG00000021849	COX4I1 (ENSAPLG00000010205) #32	EMC8 (ENSAPLG00000026906) #31	GINS2 (ENSAPLG00000024989) #29	GSE1 (ENSAPLG00000020408) #28	ENSAPLG00000026309	ENSAPLG00000005230 #26
Neognathae_b	ANCESTRAL SPECIES	15	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251.f #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01040000241165	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Neognathae_c	ANCESTRAL SPECIES	18	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251.f #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01040000241165	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Kakapo	DUPLICATION
Kakapo	MODERN SPECIES	4	ENSSHBG00005000324	ENSSHBG00005000326	ENSSHBG00005000328	ENSSHBG00005000330	ENSSHBG00005000334	ENSSHBG00005000339	ENSSHBG00005000343	ENSSHBG00005000344	ENSSHBG00005000347	ENSSHBG00005000360	ENSSHBG00005000369	ENSSHBG00005000370	ENSSHBG00005000372	ENSSHBG00005000373	ENSSHBG00005000375	ENSSHBG00005000377 #22	ENSSHBG00005000380 #23	ENSSHBG00005000384	ENSSHBG00005000386 #25	ENSSHBG00005000387	ENSSHBG00005000389 #37	ENSSHBG00005000390	ENSSHBG00005000392	ENSSHBG00005000393 #34	ENSSHBG00005000395 #33	ENSSHBG00005000397	ENSSHBG00005000400 #32	ENSSHBG00005000401 #31	ENSSHBG00005000403	ENSSHBG00005000404 #29	ENSSHBG00005000008 #28
Kakapo	MODERN SPECIES	19	PLCG2 (ENSSHBG00005012588)	SDR42E1 (ENSSHBG00005012498)	HSD17B2 (ENSSHBG00005012293)	ENSSHBG00005012234	ENSSHBG00005012218	ENSSHBG00005012207	MPHOSPH6 (ENSSHBG00005012198)	ENSSHBG00005012175	MLYCD (ENSSHBG00005012147) #8	HSBP1 (ENSSHBG00005012133) #7	KCNG4 (ENSSHBG00005012125) #17	WFDC1 (ENSSHBG00005012110) #18	ATP2C2 (ENSSHBG00005012019) #19	MEAK7 (ENSSHBG00005011979) #20	COTL1 (ENSSHBG00005011964) #21	ENSSHBG00005011959 #22	ENSSHBG00005011948 #23	CRISPLD2 (ENSSHBG00005011931) #24	ENSSHBG00005011917	ENSSHBG00005011902 #25	ENSSHBG00005011890 #37	FOXC2 (ENSSHBG00005011880) #36	MTHFSD (ENSSHBG00005011871) #35	ENSSHBG00005011858 #34	ENSSHBG00005011846 #33	ENSSHBG00005011829	ENSSHBG00005011820 #32	ENSSHBG00005011805 #31	ENSSHBG00005011793	ENSSHBG00005011780 #29	ENSSHBG00005011767
Golden eagle	MODERN SPECIES	25	PLCG2 (ENSACCG00020003960)	SDR42E1 (ENSACCG00020003812)	HSD17B2 (ENSACCG00020003783)	ENSACCG00020003752	ENSACCG00020003741	ENSACCG00020003736	MPHOSPH6 (ENSACCG00020003725)	CDH13 (ENSACCG00020003709)	MLYCD (ENSACCG00020003692) #8	HSBP1 (ENSACCG00020003682) #7	KCNG4 (ENSACCG00020003669) #17	WFDC1 (ENSACCG00020003652) #18	ATP2C2 (ENSACCG00020003621) #19	MEAK7 (ENSACCG00020003585) #20	COTL1 (ENSACCG00020003571) #21	KLHL36 (ENSACCG00020003544) #22	USP10 (ENSACCG00020003492) #23	CRISPLD2 (ENSACCG00020003457) #24	ENSACCG00020003436	ZDHHC7 (ENSACCG00020003427) #25	FOXL1 (ENSACCG00020003416) #37	FOXC2 (ENSACCG00020003405) #36	MTHFSD (ENSACCG00020003395) #35	FOXF1 (ENSACCG00020003377) #34	IRF8 (ENSACCG00020003360) #33	ENSACCG00020003346	COX4I1 (ENSACCG00020003327) #32	EMC8 (ENSACCG00020003310) #31	ENSACCG00020003299	GINS2 (ENSACCG00020003285) #29	GSE1 (ENSACCG00020003227) #28
Passeriformes	ANCESTRAL SPECIES	13	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251.e #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01040000241165	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Passeriformes_d	ANCESTRAL SPECIES	13	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251.e #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01040000241165	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Flycatcher	MODERN SPECIES	2	SDR42E1 (ENSFALG00000023083)	HSD17B2 (ENSFALG00000006730)	ENSFALG00000014290	ENSFALG00000014286	ENSFALG00000014283	MPHOSPH6 (ENSFALG00000028959)	ENSFALG00000025591	CDH13 (ENSFALG00000006727)	ENSFALG00000006725 #8	ENSFALG00000026189 #7	KCNG4 (ENSFALG00000006721) #17	ENSFALG00000006716	ATP2C2 (ENSFALG00000006709) #19	MEAK7 (ENSFALG00000006703) #20	COTL1 (ENSFALG00000025685) #21	KLHL36 (ENSFALG00000006693) #22	USP10 (ENSFALG00000006689) #23	CRISPLD2 (ENSFALG00000006687) #24	ENSFALG00000006678	ZDHHC7 (ENSFALG00000023069) #25	FOXC2 (ENSFALG00000006663) #36	MTHFSD (ENSFALG00000027656) #35	FOXF1 (ENSFALG00000006654) #34	ENSFALG00000026396	IRF8 (ENSFALG00000006647) #33	ENSFALG00000023982	COX4I1 (ENSFALG00000006638) #32	EMC8 (ENSFALG00000006625) #31	ENSFALG00000027907	GINS2 (ENSFALG00000023337) #29	GSE1 (ENSFALG00000006615) #28
Passeriformes_g	ANCESTRAL SPECIES	17	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251.e #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01040000241165	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Passeroidea	ANCESTRAL SPECIES	17	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.ab.b	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251.e #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01040000241165	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Common canary	MODERN SPECIES	14	PLCG2 (ENSSCAG00000006629)	SDR42E1 (ENSSCAG00000006634)	HSD17B2 (ENSSCAG00000006639)	ENSSCAG00000006652	ENSSCAG00000006658	ENSSCAG00000006660	MPHOSPH6 (ENSSCAG00000006662)	CDH13 (ENSSCAG00000006672)	MLYCD (ENSSCAG00000006674) #8	HSBP1 (ENSSCAG00000006677) #7	KCNG4 (ENSSCAG00000006680) #17	WFDC1 (ENSSCAG00000006682) #18	ATP2C2 (ENSSCAG00000006685) #19	MEAK7 (ENSSCAG00000006700) #20	COTL1 (ENSSCAG00000006708) #21	KLHL36 (ENSSCAG00000006714) #22	USP10 (ENSSCAG00000006735) #23	CRISPLD2 (ENSSCAG00000006741) #24	ENSSCAG00000006745	ENSSCAG00000006749 #25	FOXC2 (ENSSCAG00000006753) #36	MTHFSD (ENSSCAG00000006760) #35	ENSSCAG00000006767	IRF8 (ENSSCAG00000006772) #33	ENSSCAG00000006777	COX4I1 (ENSSCAG00000006803) #32	EMC8 (ENSSCAG00000006805) #31	ENSSCAG00000006813	GINS2 (ENSSCAG00000006817) #29	ENSSCAG00000006822	GSE1 (ENSSCAG00000006831) #28
Zebra finch	MODERN SPECIES	2	nat4 (ENSTGUG00000004382)	nat2 (ENSTGUG00000004387)	ENSTGUG00000021722	MPHOSPH6 (ENSTGUG00000025891)	CDH13 (ENSTGUG00000004357)	MLYCD (ENSTGUG00000004352) #8	HSBP1 (ENSTGUG00000004346) #7	ENSTGUG00000028043 #17	WFDC1 (ENSTGUG00000004342) #18	ENSTGUG00000004269 #19	ENSTGUG00000021270 #20	ENSTGUG00000004264 #20	ENSTGUG00000004343 #17	ENSTGUG00000019821 #19	COTL1 (ENSTGUG00000027103) #21	KLHL36 (ENSTGUG00000004250) #22	USP10 (ENSTGUG00000004217) #23	CRISPLD2 (ENSTGUG00000004192) #24	ENSTGUG00000004174	ZDHHC7 (ENSTGUG00000004169) #25	FOXL1 (ENSTGUG00000004166) #37	FOXC2 (ENSTGUG00000004163) #36	MTHFSD (ENSTGUG00000004154) #35	FOXF1 (ENSTGUG00000004150) #34	IRF8 (ENSTGUG00000004127) #33	ENSTGUG00000004124	ENSTGUG00000004109 #32	EMC8 (ENSTGUG00000004096) #31	GSE1 (ENSTGUG00000007561) #28	KIAA0513 (ENSTGUG00000007582) #26	FBXO31 (ENSTGUG00000007593)
Medium ground finch	MODERN SPECIES	76									MLYCD (ENSGFOG00000002722) #8	HSBP1 (ENSGFOG00000002754) #7	KCNG4 (ENSGFOG00000002767) #17	WFDC1 (ENSGFOG00000002779) #18	ATP2C2 (ENSGFOG00000002906) #19	MEAK7 (ENSGFOG00000003627) #20	COTL1 (ENSGFOG00000003644) #21	KLHL36 (ENSGFOG00000003654) #22	USP10 (ENSGFOG00000003669) #23	CRISPLD2 (ENSGFOG00000003727) #24	ENSGFOG00000003771	ZDHHC7 (ENSGFOG00000003808) #25	FOXC2 (ENSGFOG00000003824) #36	MTHFSD (ENSGFOG00000003841) #35	FOXF1 (ENSGFOG00000003904) #34	IRF8 (ENSGFOG00000003917) #33	ENSGFOG00000003938	COX4I1 (ENSGFOG00000003946) #32	EMC8 (ENSGFOG00000003957) #31	GINS2 (ENSGFOG00000003982) #29	GSE1 (ENSGFOG00000003994) #28	KIAA0513 (ENSGFOG00000004009) #26	FBXO31 (ENSGFOG00000004033)
Great tit	MODERN SPECIES	2	SDR42E1 (ENSPMJG00000013981)	HSD17B2 (ENSPMJG00000013980)	ENSPMJG00000013978	ENSPMJG00000013977	ENSPMJG00000013976	MPHOSPH6 (ENSPMJG00000013975)	CDH13 (ENSPMJG00000013971)	MLYCD (ENSPMJG00000013963) #8	HSBP1 (ENSPMJG00000013962) #7	KCNG4 (ENSPMJG00000013958) #17	ENSPMJG00000013957	WFDC1 (ENSPMJG00000013956) #18	ATP2C2 (ENSPMJG00000013955) #19	MEAK7 (ENSPMJG00000013951) #20	COTL1 (ENSPMJG00000013949) #21	KLHL36 (ENSPMJG00000013947) #22	USP10 (ENSPMJG00000013945) #23	CRISPLD2 (ENSPMJG00000013940) #24	ENSPMJG00000013936	ZDHHC7 (ENSPMJG00000013934) #25	FOXL1 (ENSPMJG00000013928) #37	FOXC2 (ENSPMJG00000013927) #36	MTHFSD (ENSPMJG00000013926) #35	FOXF1 (ENSPMJG00000013923) #34	IRF8 (ENSPMJG00000013919) #33	ENSPMJG00000013918	COX4I1 (ENSPMJG00000013917) #32	EMC8 (ENSPMJG00000013916) #31	ENSPMJG00000013915	GINS2 (ENSPMJG00000013914) #29	ENSPMJG00000013913
African ostrich	MODERN SPECIES	889	PLCG2 (ENSSCUG00000012749)	SDR42E1 (ENSSCUG00000012746)	HSD17B2 (ENSSCUG00000012744)	ENSSCUG00000012742	ENSSCUG00000012740	ENSSCUG00000012738	MPHOSPH6 (ENSSCUG00000012736)	CDH13 (ENSSCUG00000012728)	MLYCD (ENSSCUG00000012723) #8	HSBP1 (ENSSCUG00000012718) #7	KCNG4 (ENSSCUG00000012714) #17	WFDC1 (ENSSCUG00000012710) #18	ATP2C2 (ENSSCUG00000012678) #19	MEAK7 (ENSSCUG00000012668) #20	COTL1 (ENSSCUG00000012667) #21	KLHL36 (ENSSCUG00000012665) #22	USP10 (ENSSCUG00000012663) #23	CRISPLD2 (ENSSCUG00000012660) #24	ENSSCUG00000012653	ZDHHC7 (ENSSCUG00000012649) #25	FOXL1 (ENSSCUG00000012639) #37	MTHFSD (ENSSCUG00000012635) #35	ENSSCUG00000012629	IRF8 (ENSSCUG00000012625) #33	COX4I1 (ENSSCUG00000012620) #32	EMC8 (ENSSCUG00000012618) #31	GINS2 (ENSSCUG00000012615) #29
Australian saltwater crocodile	MODERN SPECIES	35	SDR42E1 (ENSCPRG00005006053)	HSD17B2 (ENSCPRG00005006082)	ENSCPRG00005006255	ENSCPRG00005006261	ENSCPRG00005006265	MPHOSPH6 (ENSCPRG00005006275)	CDH13 (ENSCPRG00005006294)	MLYCD (ENSCPRG00005006313) #8	ENSCPRG00005006320	HSBP1 (ENSCPRG00005006321) #7	KCNG4 (ENSCPRG00005006329) #17	WFDC1 (ENSCPRG00005006344) #18	ATP2C2 (ENSCPRG00005006346) #19	MEAK7 (ENSCPRG00005006352) #20	ENSCPRG00005006356 #21	KLHL36 (ENSCPRG00005006359) #22	USP10 (ENSCPRG00005006388) #23	CRISPLD2 (ENSCPRG00005006599) #24	ENSCPRG00005006611	ZDHHC7 (ENSCPRG00005006621) #25	FOXL1 (ENSCPRG00005006666) #37	FOXC2 (ENSCPRG00005006670) #36	MTHFSD (ENSCPRG00005006673) #35	FOXF1 (ENSCPRG00005006679) #34	IRF8 (ENSCPRG00005006696) #33	COX4I1 (ENSCPRG00005006699) #32	EMC8 (ENSCPRG00005006704) #31	ENSCPRG00005006710	GINS2 (ENSCPRG00005006713) #29	GSE1 (ENSCPRG00005006721) #28	ENSCPRG00005006724
Cryptodira	ANCESTRAL SPECIES	14	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000172426	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01030000235245	ENSGT00390000007838 #29
Testudinoidea	ANCESTRAL SPECIES	13	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293.od #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251.g #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01030000235245	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Emydidae	ANCESTRAL SPECIES	47	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293.pd #7	ENSGT00940000156938 #17	ENSGT00390000014299.i #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519.e #25	ENSGT00940000162251.g #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01030000235245	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	2267	ENSTMTG00000011182	ENSTMTG00000011289	ENSTMTG00000012327	ENSTMTG00000012335	ENSTMTG00000012349	ENSTMTG00000012366	ENSTMTG00000012392	ENSTMTG00000012415	ENSTMTG00000012475 #8	ENSTMTG00000012535 #7	ENSTMTG00000012560 #17	ENSTMTG00000012630 #18	ENSTMTG00000012651 #19	ENSTMTG00000012723 #20	ENSTMTG00000012740 #21	ENSTMTG00000012748 #22	ENSTMTG00000012762 #23	ENSTMTG00000012808 #24	ENSTMTG00000012828	ENSTMTG00000012860 #25	ENSTMTG00000012872 #37	ENSTMTG00000012881 #36	ENSTMTG00000012923 #35	ENSTMTG00000013098 #34	ENSTMTG00000013106 #33	ENSTMTG00000013124	ENSTMTG00000013139 #32	ENSTMTG00000013151 #31	ENSTMTG00000013164	ENSTMTG00000013179 #29	ENSTMTG00000013206 #28
Three-toed box turtle	MODERN SPECIES	2272	ENSTMTG00000013546	ENSTMTG00000013651	ENSTMTG00000014269	ENSTMTG00000014279	ENSTMTG00000014298	ENSTMTG00000014313	ENSTMTG00000014328	ENSTMTG00000014339	ENSTMTG00000014386 #8	ENSTMTG00000014461 #7	ENSTMTG00000014476 #17	ENSTMTG00000014519 #18	ENSTMTG00000014538 #19	ENSTMTG00000014607 #20	ENSTMTG00000014623 #21	ENSTMTG00000014638 #22	ENSTMTG00000014660 #23	ENSTMTG00000014697 #24	ENSTMTG00000014718	ENSTMTG00000014741 #25	ENSTMTG00000014752 #37	ENSTMTG00000014764 #36	ENSTMTG00000009862	ENSTMTG00000009927 #35	ENSTMTG00000009940 #34	ENSTMTG00000009955 #33	ENSTMTG00000009986	ENSTMTG00000010002 #32	ENSTMTG00000010018 #31	ENSTMTG00000010033	ENSTMTG00000010038 #29
painted turtle	MODERN SPECIES	708	CMIP (ENSCPBG00000023954)	PLCG2 (ENSCPBG00000023944)	SDR42E1 (ENSCPBG00000023938)	HSD17B2 (ENSCPBG00000023906)	ENSCPBG00000023901	ENSCPBG00000023899	MPHOSPH6 (ENSCPBG00000023898)	CDH13 (ENSCPBG00000023893)	MLYCD (ENSCPBG00000023890) #8	HSBP1 (ENSCPBG00000023888) #7	KCNG4 (ENSCPBG00000023886) #17	WFDC1 (ENSCPBG00000023882) #18	ATP2C2 (ENSCPBG00000023713) #19	MEAK7 (ENSCPBG00000023628) #20	COTL1 (ENSCPBG00000023626) #21	KLHL36 (ENSCPBG00000023624) #22	USP10 (ENSCPBG00000023617) #23	CRISPLD2 (ENSCPBG00000023606) #24	ENSCPBG00000023600	ZDHHC7 (ENSCPBG00000023597) #25	ENSCPBG00000023591	ENSCPBG00000023588 #37	FOXC2 (ENSCPBG00000023585) #36	MTHFSD (ENSCPBG00000023581) #35	FOXF1 (ENSCPBG00000023578) #34	IRF8 (ENSCPBG00000023576) #33	ENSCPBG00000023573	COX4I1 (ENSCPBG00000023571) #32	EMC8 (ENSCPBG00000023570) #31	ENSCPBG00000023568	GINS2 (ENSCPBG00000023566) #29
Testudinidae	ANCESTRAL SPECIES	17	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab.a	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293.od #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251.g #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01030000235245	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Goode s thornscrub tortoise	MODERN SPECIES	3	PLCG2 (ENSGEVG00005016632)	SDR42E1 (ENSGEVG00005016717)	HSD17B2 (ENSGEVG00005016732)	ENSGEVG00005016762	ENSGEVG00005016789	ENSGEVG00005016819	MPHOSPH6 (ENSGEVG00005016869)	CDH13 (ENSGEVG00005016890)	MLYCD (ENSGEVG00005016971) #8	HSBP1 (ENSGEVG00005016989) #7	KCNG4 (ENSGEVG00005017003) #17	WFDC1 (ENSGEVG00005017047) #18	ATP2C2 (ENSGEVG00005017125) #19	MEAK7 (ENSGEVG00005017475) #20	COTL1 (ENSGEVG00005017499) #21	KLHL36 (ENSGEVG00005017511) #22	USP10 (ENSGEVG00005017534) #23	CRISPLD2 (ENSGEVG00005017574) #24	ENSGEVG00005017602	ZDHHC7 (ENSGEVG00005017648) #25	ENSGEVG00005017664 #37	FOXC2 (ENSGEVG00005017690) #36	MTHFSD (ENSGEVG00005017702) #35	FOXF1 (ENSGEVG00005017719) #34	IRF8 (ENSGEVG00005017739) #33	ENSGEVG00005017754	COX4I1 (ENSGEVG00005017785) #32	EMC8 (ENSGEVG00005017794) #31	ENSGEVG00005004217	GINS2 (ENSGEVG00005004238) #29	GSE1 (ENSGEVG00005004284) #28
Abingdon island giant tortoise	MODERN SPECIES	551									MLYCD (ENSCABG00000011856) #8	HSBP1 (ENSCABG00000011859) #7	KCNG4 (ENSCABG00000011861) #17	WFDC1 (ENSCABG00000011863) #18	ATP2C2 (ENSCABG00000011864) #19	MEAK7 (ENSCABG00000011866) #20	COTL1 (ENSCABG00000011868) #21	KLHL36 (ENSCABG00000011870) #22	ENSCABG00000011873	ENSCABG00000011875
Chinese turtle	MODERN SPECIES	2019									MLYCD (ENSPSIG00000015860) #8	HSBP1 (ENSPSIG00000015840) #7	KCNG4 (ENSPSIG00000015827) #17	WFDC1 (ENSPSIG00000015816) #18	ATP2C2 (ENSPSIG00000014684) #19	MEAK7 (ENSPSIG00000014255) #20	COTL1 (ENSPSIG00000014015) #21	KLHL36 (ENSPSIG00000013941) #22
Lepidosauria	ANCESTRAL SPECIES	29	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140.d #33	ENSGT00940000164598	ENSGT01030000239461	ENSGT01090000261337	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01030000235245
tuatara	MODERN SPECIES	59	CMIP (ENSSPUG00000008429)	PLCG2 (ENSSPUG00000008391)	SDR42E1 (ENSSPUG00000008384)	HSD17B2 (ENSSPUG00000008318)	ENSSPUG00000008305	MPHOSPH6 (ENSSPUG00000008289)	ENSSPUG00000008273	ENSSPUG00000008137	MLYCD (ENSSPUG00000008100) #8	HSBP1 (ENSSPUG00000008085) #7	KCNG4 (ENSSPUG00000008081) #17	WFDC1 (ENSSPUG00000008075) #18	ATP2C2 (ENSSPUG00000008045) #19	MEAK7 (ENSSPUG00000008023) #20	COTL1 (ENSSPUG00000008015) #21	KLHL36 (ENSSPUG00000008001) #22	USP10 (ENSSPUG00000007982) #23	CRISPLD2 (ENSSPUG00000007965) #24	ENSSPUG00000007949	ZDHHC7 (ENSSPUG00000007940) #25	FOXC2 (ENSSPUG00000007907) #36	MTHFSD (ENSSPUG00000007833) #35	FOXF1 (ENSSPUG00000007815) #34	IRF8 (ENSSPUG00000007805) #33	ENSSPUG00000007761	COX4I1 (ENSSPUG00000007755) #32	EMC8 (ENSSPUG00000007744) #31	ENSSPUG00000007736	GINS2 (ENSSPUG00000007729) #29	GSE1 (ENSSPUG00000007720) #28	CIBAR2 (ENSSPUG00000007681) #27
Episquamata	ANCESTRAL SPECIES	11	ENSGT00940000166682	ENSGT00940000158960	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140.d #33	ENSGT00940000164598	ENSGT01030000239461	ENSGT01090000261337	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT00390000007838 #29
Laterata	ANCESTRAL SPECIES	28	ENSGT00940000166682	ENSGT00940000158960	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140.d #33	ENSGT00940000164598	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28	ENSGT00390000010285.d #27	ENSGT00390000010606.`b.a
Common wall lizard	MODERN SPECIES	16	ENSPMRG00000011493	HSD17B2 (ENSPMRG00000011487)	SDR42E1 (ENSPMRG00000011483)	ENSPMRG00000011479	SLC6A2 (ENSPMRG00000011472)	LPCAT2 (ENSPMRG00000011462)	MMP2 (ENSPMRG00000011456)	IRX6 (ENSPMRG00000011448)	IRX5 (ENSPMRG00000011443)	IRX3 (ENSPMRG00000011439)	FTO (ENSPMRG00000011411)	RPGRIP1L (ENSPMRG00000011355)	ATP2C2 (ENSPMRG00000011332) #19	MEAK7 (ENSPMRG00000011322) #20	COTL1 (ENSPMRG00000011318) #21	KLHL36 (ENSPMRG00000011314) #22	ENSPMRG00000011313	ENSPMRG00000011308	USP10 (ENSPMRG00000011293) #23	ENSPMRG00000011284	CRISPLD2 (ENSPMRG00000011276) #24	ENSPMRG00000011265	ZDHHC7 (ENSPMRG00000011259) #25	FOXC2 (ENSPMRG00000011253) #36	FOXF1 (ENSPMRG00000011250) #34	MTHFSD (ENSPMRG00000011245) #35	IRF8 (ENSPMRG00000011240) #33	ENSPMRG00000011236	COX4I1 (ENSPMRG00000011226) #32	EMC8 (ENSPMRG00000011224) #31	ENSPMRG00000011220
Argentine black and white tegu	MODERN SPECIES	51	CAPNS2 (ENSSMRG00000006204)	SLC6A2 (ENSSMRG00000006212)	SDR42E1 (ENSSMRG00000006244)	HSD17B2 (ENSSMRG00000006251)	ENSSMRG00000006414	ENSSMRG00000006423	MPHOSPH6 (ENSSMRG00000006427)	CDH13 (ENSSMRG00000006433)	MLYCD (ENSSMRG00000006437) #8	ENSSMRG00000006441 #7	KCNG4 (ENSSMRG00000006447) #17	WFDC1 (ENSSMRG00000006465) #18	ATP2C2 (ENSSMRG00000006482) #19	MEAK7 (ENSSMRG00000006506) #20	COTL1 (ENSSMRG00000006510) #21	KLHL36 (ENSSMRG00000006517) #22	USP10 (ENSSMRG00000006518) #23	CRISPLD2 (ENSSMRG00000006527) #24	ENSSMRG00000006536	ZDHHC7 (ENSSMRG00000006547) #25	FOXC2 (ENSSMRG00000006567) #36	MTHFSD (ENSSMRG00000006568) #35	FOXF1 (ENSSMRG00000006571) #34	ENSSMRG00000006574	IRF8 (ENSSMRG00000006592) #33	ENSSMRG00000006601	ENSSMRG00000006605	COX4I1 (ENSSMRG00000006608) #32	EMC8 (ENSSMRG00000006614) #31	ENSSMRG00000006619	GINS2 (ENSSMRG00000006622) #29
Toxicofera	ANCESTRAL SPECIES	16	ENSGT01030000234574.A.b.a	ENSGT00940000158960	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000012054.b.`b	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293 #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140.d #33	ENSGT00940000164598	ENSGT01030000239461	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28
Elapidae	ANCESTRAL SPECIES	17	ENSGT00950000182843.a.a.a.b.a.b	ENSGT00640000091563.b	ENSGT00940000158960	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293.sd #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140.d #33	ENSGT00940000164598	ENSGT01030000239461	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01000000218436	ENSGT00390000007838 #29
Elapidae_a	ANCESTRAL SPECIES	28	ENSGT00940000155478	ENSGT00950000182843.a.a.a.b.a.b	ENSGT00940000158960	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293.sd #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140.d #33	ENSGT00940000158140.c #33	ENSGT00940000164598	ENSGT01030000239461	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT01000000218436
Acanthophiinae	ANCESTRAL SPECIES	26	ENSGT01030000234574.A.b.a	ENSGT00940000155478	ENSGT00940000158960	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000012054.b.ab	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00390000006293.sd #7	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140.d #33	ENSGT00940000158140.c #33	ENSGT00940000164598	ENSGT01030000239461	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT00390000007838 #29
Eastern brown snake	MODERN SPECIES	65	LPCAT2 (ENSPTXG00000009556)	ENSPTXG00000009559	SLC6A2 (ENSPTXG00000009562)	SDR42E1 (ENSPTXG00000009777)	HSD17B2 (ENSPTXG00000009778)	ENSPTXG00000009807	MPHOSPH6 (ENSPTXG00000009808)	CDH13 (ENSPTXG00000009809)	MLYCD (ENSPTXG00000009810) #8	HSBP1 (ENSPTXG00000009811) #7	KCNG4 (ENSPTXG00000009812) #17	WFDC1 (ENSPTXG00000009813) #18	ATP2C2 (ENSPTXG00000009818) #19	MEAK7 (ENSPTXG00000009820) #20	ENSPTXG00000009821	ENSPTXG00000009822 #22	USP10 (ENSPTXG00000009823) #23	CRISPLD2 (ENSPTXG00000009827) #24	ENSPTXG00000009833	ZDHHC7 (ENSPTXG00000009834) #25	FOXL1 (ENSPTXG00000009835) #37	FOXC2 (ENSPTXG00000009836) #36	ENSPTXG00000009837 #35	ENSPTXG00000009838 #35	FOXF1 (ENSPTXG00000009839) #34	IRF8 (ENSPTXG00000005925) #33	ENSPTXG00000005926 #33	ENSPTXG00000005927	ENSPTXG00000005928	COX4I1 (ENSPTXG00000005929) #32	EMC8 (ENSPTXG00000005930) #31
Mainland tiger snake	MODERN SPECIES	216									MLYCD (ENSNSUG00000019453) #8	ENSNSUG00000019452 #7	KCNG4 (ENSNSUG00000019451) #17	WFDC1 (ENSNSUG00000019450) #18	ATP2C2 (ENSNSUG00000019022) #19	MEAK7 (ENSNSUG00000019021) #20	COTL1 (ENSNSUG00000019020) #21	KLHL36 (ENSNSUG00000019019) #22	USP10 (ENSNSUG00000019018) #23	CRISPLD2 (ENSNSUG00000019017) #24	ENSNSUG00000019016	ZDHHC7 (ENSNSUG00000019015) #25	FOXL1 (ENSNSUG00000019014) #37	FOXC2 (ENSNSUG00000019013) #36	ENSNSUG00000019012 #35	ENSNSUG00000019011 #35	FOXF1 (ENSNSUG00000019010) #34	EMC8 (ENSNSUG00000019009) #31	GINS2 (ENSNSUG00000019008) #29	GSE1 (ENSNSUG00000019007) #28
Anura	ANCESTRAL SPECIES	92	ENSGT00940000162986.r	ENSGT00940000157517	ENSGT00940000158070	ENSGT00940000160204	ENSGT00390000009212	ENSGT00940000155218.B	ENSGT00390000005410 #8	ENSGT00940000166270	ENSGT00390000006293 #7	ENSGT00390000002381.b	ENSGT00940000156938 #17	ENSGT00390000014299 #18	ENSGT00940000160275 #19	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00550000074994 #23	ENSGT00940000157410 #24	ENSGT00940000165027	ENSGT00940000156519 #25	ENSGT00940000162251 #37	ENSGT00940000162619 #36	ENSGT00390000011730 #35	ENSGT00940000161035 #34	ENSGT00940000158140 #33	ENSGT00390000002407.d #32	ENSGT00390000006738.a #31	ENSGT00390000007838 #29	ENSGT00700000104539.b.a #28	ENSGT00390000010285.d #27
Leishan spiny toad	MODERN SPECIES	1	ENSLLEG00000022387	MPHOSPH6 (ENSLLEG00000022286)	ENSLLEG00000022254	CDH13 (ENSLLEG00000021246)	ENSLLEG00000021113	ENSLLEG00000021073	MLYCD (ENSLLEG00000020936) #8	ENSLLEG00000020785	HSBP1 (ENSLLEG00000020733) #7	ENSLLEG00000020662	KCNG4 (ENSLLEG00000020617) #17	WFDC1 (ENSLLEG00000025933) #18	ATP2C2 (ENSLLEG00000025301) #19	MEAK7 (ENSLLEG00000025129) #20	COTL1 (ENSLLEG00000025048) #21	KLHL36 (ENSLLEG00000024973) #22	ENSLLEG00000024936	USP10 (ENSLLEG00000023153) #23	CRISPLD2 (ENSLLEG00000022729) #24	ENSLLEG00000022371	ZDHHC7 (ENSLLEG00000022239) #25	ENSLLEG00000022190	FOXL1 (ENSLLEG00000022133) #37	FOXC2 (ENSLLEG00000022126) #36	MTHFSD (ENSLLEG00000022027) #35	FOXF1 (ENSLLEG00000021875) #34	ENSLLEG00000021838	IRF8 (ENSLLEG00000021127) #33	ENSLLEG00000020952 #32	EMC8 (ENSLLEG00000020878) #31	ENSLLEG00000020836
Frog	MODERN SPECIES	4	plcg2 (ENSXETG00000003578)	sdr42e1 (ENSXETG00000048422)	hsd17b2 (ENSXETG00000003579)	mphosph6 (ENSXETG00000045183)	ENSXETG00000043412	cdh13 (ENSXETG00000006627)	mlycd (ENSXETG00000013233) #8	top1.2 (ENSXETG00000013237)	hsbp1 (ENSXETG00000025864) #7	slc66a2.2 (ENSXETG00000030258)	kcng4 (ENSXETG00000013259) #17	wfdc1 (ENSXETG00000013283) #18	atp2c2 (ENSXETG00000013287) #19	meak7 (ENSXETG00000013322) #20	ENSXETG00000045054	klhl36 (ENSXETG00000013326) #22	usp10 (ENSXETG00000013390) #23	crispld2 (ENSXETG00000013394) #24	hnf4b (ENSXETG00000016389)	zdhhc7 (ENSXETG00000025991) #25	foxl1 (ENSXETG00000016388) #37	ENSXETG00000016387 #36	tango6 (ENSXETG00000016378)	has3 (ENSXETG00000016377)	chtf8 (ENSXETG00000046591)	cdh1 (ENSXETG00000025992)	ENSXETG00000039796	sntb2 (ENSXETG00000030281)	ENSXETG00000047687	ENSXETG00000046567	ENSXETG00000046660
Coelacanth	MODERN SPECIES	1616														ATP2C2 (ENSLACG00000007254) #19	COTL1 (ENSLACG00000003512) #21	KLHL36 (ENSLACG00000002368) #22
Actinopterygii	ANCESTRAL SPECIES	1160															ENSGT00960000189804	ENSGT00940000157543 #22
Reedfish	MODERN SPECIES	17	mlycd (ENSECRG00000007466) #8	CDH13 (ENSECRG00000007483)	mphosph6 (ENSECRG00000011341)	zgc:101040 (ENSECRG00000011378)	HSD17B2 (ENSECRG00000011401)	sdr42e1 (ENSECRG00000011435)	kiaa0513 (ENSECRG00000011475) #26	foxl1 (ENSECRG00000011508) #37	FOXC2 (ENSECRG00000011518) #36	GAN (ENSECRG00000011548)	CMIP (ENSECRG00000011662)	plcg2 (ENSECRG00000011694)	ATP2C2 (ENSECRG00000011749) #19	meak7 (ENSECRG00000011794) #20	cotl1 (ENSECRG00000011806) #21	klhl36 (ENSECRG00000011819) #22	ENSECRG00000011950	tat (ENSECRG00000011982)	ENSECRG00000012029	ano10b (ENSECRG00000012084)	ldhd (ENSECRG00000012109)	necap1 (ENSECRG00000012128)	ENSECRG00000012141	ENSECRG00000012194	ENSECRG00000012287	ENSECRG00000012299	ENSECRG00000012313	ENSECRG00000012324	ENSECRG00000012338	lcat (ENSECRG00000012352)	DRC7 (ENSECRG00000012370)
Neopterygii	ANCESTRAL SPECIES	941															ENSGT00960000189804	ENSGT00940000157543 #22
Spotted gar	MODERN SPECIES	662	zc3h18 (ENSLOCG00000002443)	trhr2 (ENSLOCG00000002461)	zfpm1 (ENSLOCG00000002480)	ENSLOCG00000017589	banp (ENSLOCG00000002495)	ENSLOCG00000002519	kiaa0513 (ENSLOCG00000002529) #26	FOXC2 (ENSLOCG00000002557) #36	FOXL1 (ENSLOCG00000002568) #37	GAN (ENSLOCG00000002584)	CMIP (ENSLOCG00000002603)	plcg2 (ENSLOCG00000002618)	ATP2C2 (ENSLOCG00000002689) #19	meak7 (ENSLOCG00000002721) #20	cotl1 (ENSLOCG00000002734) #21	klhl36 (ENSLOCG00000002761) #22	tat (ENSLOCG00000002775)	nqo1 (ENSLOCG00000002794)	zgc:56622 (ENSLOCG00000002811)	pdf (ENSLOCG00000002834)	vps4a (ENSLOCG00000002848)	SNTB2 (ENSLOCG00000002866)	spire2 (ENSLOCG00000002891)	FANCA (ENSLOCG00000002909)	znf276 (ENSLOCG00000002928)	vps9d1 (ENSLOCG00000002943)	ENSLOCG00000002971	ENSLOCG00000002985	cdk10 (ENSLOCG00000002991)	chmp1a (ENSLOCG00000003012)	slc10a3 (ENSLOCG00000017590)
Osteoglossocephalai	ANCESTRAL SPECIES		ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000166375	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT00390000018698	ENSGT01030000234925	ENSGT00530000063956.b.a	ENSGT00960000187029	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a	ENSGT00390000003058.b.a.b
Osteoglossiformes	ANCESTRAL SPECIES	26	ENSGT00940000153533.b	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000166375.a	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000155273	ENSGT00390000018220.i	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT00390000018698	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000157319	ENSGT00950000182863.A.a.a	ENSGT00390000003058.b.a.b	ENSGT00940000162986.a	ENSGT00940000154635.b	ENSGT00950000183081.b.j
Asian bonytongue	MODERN SPECIES	22	ENSSFOG00015022662	zc3h18 (ENSSFOG00015022688)	trhr2 (ENSSFOG00015022764)	zfpm1 (ENSSFOG00015026433)	ENSSFOG00015022870	kiaa0513 (ENSSFOG00015022903) #26	foxl1 (ENSSFOG00015027338) #37	GAN (ENSSFOG00015022951)	CMIP (ENSSFOG00015023002)	ENSSFOG00015023034	ENSSFOG00015023044	plcg2 (ENSSFOG00015023087)	plcg2 (ENSSFOG00015023185)	meak7 (ENSSFOG00015023215) #20	cotl1 (ENSSFOG00015030724) #21	klhl36 (ENSSFOG00015023227) #22	zgc:56622 (ENSSFOG00015023233)	tat (ENSSFOG00015023250)	pdf (ENSSFOG00015023265)	ENSSFOG00015023292	vps9d1 (ENSSFOG00015023270)	znf276 (ENSSFOG00015023301)	FANCA (ENSSFOG00015023311)	ENSSFOG00015023349	slc10a3 (ENSSFOG00015023352)	chmp1a (ENSSFOG00015028847)	vps4a (ENSSFOG00015023362)	SNTB2 (ENSSFOG00015025758)	spire2 (ENSSFOG00015023378)	chst6 (ENSSFOG00015023382)	GABARAPL2 (ENSSFOG00015030642)
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES		poglut1 (ENSPKIG00000008240)	timmdc1 (ENSPKIG00000008274)	KCNE2 (ENSPKIG00000008295)	SLC5A3 (ENSPKIG00000008303)	ITSN1 (ENSPKIG00000008328)	cryzl1 (ENSPKIG00000008403)	setd4 (ENSPKIG00000008446)	cbr1 (ENSPKIG00000008486)	DOP1B (ENSPKIG00000008513)	ENSPKIG00000008578	ENSPKIG00000008611	ENSPKIG00000008629	ENSPKIG00000008663	morc3a (ENSPKIG00000008698)	chaf1b (ENSPKIG00000008763)	ENSPKIG00000008821 #22	acp6 (ENSPKIG00000008848)	gja8b (ENSPKIG00000008881)	ENSPKIG00000008924	ENSPKIG00000008950	ENSPKIG00000008961	ENSPKIG00000008981	LRRC58 (ENSPKIG00000008994)	GSK3B (ENSPKIG00000009029)	nr1i2 (ENSPKIG00000009082)	CFAP91 (ENSPKIG00000009135)	ENSPKIG00000009156	ENSPKIG00000009175	zgc:113337 (ENSPKIG00000009218)	u2af1 (ENSPKIG00000009285)	CBS (ENSPKIG00000009339)
P. kingsleyae	MODERN SPECIES	23	utp4 (ENSPKIG00000003525)	has3 (ENSPKIG00000003565)	TANGO6 (ENSPKIG00000003592)	ENSPKIG00000003637	zc3h18 (ENSPKIG00000003664)	trhr2 (ENSPKIG00000003707)	zfpm1 (ENSPKIG00000003731)	ces3 (ENSPKIG00000003830)	kiaa0513 (ENSPKIG00000003996) #26	foxl1 (ENSPKIG00000004082) #37	GAN (ENSPKIG00000004115)	CMIP (ENSPKIG00000004161)	plcg2 (ENSPKIG00000004194)	meak7 (ENSPKIG00000004260) #20	cotl1 (ENSPKIG00000004291) #21	klhl36 (ENSPKIG00000004368) #22	zgc:56622 (ENSPKIG00000004405)	tat (ENSPKIG00000004444)	pdf (ENSPKIG00000004491)	ENSPKIG00000004510	vps9d1 (ENSPKIG00000004558)	znf276 (ENSPKIG00000004626)	ENSPKIG00000004656	slc10a3 (ENSPKIG00000004672)	chmp1a (ENSPKIG00000004700)	vps4a (ENSPKIG00000004735)	SNTB2 (ENSPKIG00000004785)	spire2 (ENSPKIG00000004842)	chst6 (ENSPKIG00000004884)	ENSPKIG00000004897	GABARAPL2 (ENSPKIG00000004911)
Clupeocephala	ANCESTRAL SPECIES	2	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000166375	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000235114	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a	ENSGT00390000003058.b.a.b
Otomorpha	ANCESTRAL SPECIES		ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000166375	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000235114	ENSGT00390000015057
Clupeiformes	ANCESTRAL SPECIES	71	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000166375	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00940000163421.a.c	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT00960000187029	ENSGT00390000015057
Denticle herring	MODERN SPECIES	8	chtf8 (ENSDCDG00000026971)	has3 (ENSDCDG00000026968)	TANGO6 (ENSDCDG00000026964)	ENSDCDG00000026961	zc3h18 (ENSDCDG00000026957)	trhr2 (ENSDCDG00000026865)	zfpm1 (ENSDCDG00000026856)	ENSDCDG00000026854	ENSDCDG00000026852	kiaa0513 (ENSDCDG00000026843) #26	GAN (ENSDCDG00000026838)	CMIP (ENSDCDG00000026368)	plcg2 (ENSDCDG00000026188)	meak7 (ENSDCDG00000026175) #20	cotl1 (ENSDCDG00000026172) #21	klhl36 (ENSDCDG00000026171) #22	zgc:56622 (ENSDCDG00000025964)	tat (ENSDCDG00000024570)	ENSDCDG00000024547	pdf (ENSDCDG00000024538)	ENSDCDG00000024528	ENSDCDG00000024519	vps9d1 (ENSDCDG00000024505)	tbc1d15 (ENSDCDG00000023274)	tph2 (ENSDCDG00000022814)	ENSDCDG00000022801	ENSDCDG00000022800	akip1 (ENSDCDG00000033984)	ENSDCDG00000033981	sinhcafl (ENSDCDG00000033978)	znf143b (ENSDCDG00000033971)
Atlantic herring	MODERN SPECIES	19	gdpgp1 (ENSCHAG00000021439)	ENSCHAG00000021457	zc3h18 (ENSCHAG00000021492)	trhr2 (ENSCHAG00000021504)	zfpm1 (ENSCHAG00000021509)	ces3 (ENSCHAG00000021517)	ENSCHAG00000021576	kiaa0513 (ENSCHAG00000021629) #26	foxl1 (ENSCHAG00000021864) #37	GAN (ENSCHAG00000021880)	CMIP (ENSCHAG00000022024)	ENSCHAG00000022596	meak7 (ENSCHAG00000022817) #20	plcg2 (ENSCHAG00000022861)	cotl1 (ENSCHAG00000022902) #21	klhl36 (ENSCHAG00000022913) #22	zgc:56622 (ENSCHAG00000022930)	tat (ENSCHAG00000022985)	ENSCHAG00000023373	pdf (ENSCHAG00000023378)	ENSCHAG00000000628	ENSCHAG00000000677	vps9d1 (ENSCHAG00000001186)	tbc1d15 (ENSCHAG00000002137)	tph2 (ENSCHAG00000006084)	ENSCHAG00000006258	ENSCHAG00000006263	swap70b (ENSCHAG00000006300)	AMPD3 (ENSCHAG00000006492)	ENSCHAG00000007327	ENSCHAG00000007353
Otophysi	ANCESTRAL SPECIES	218										ENSGT00940000155273	ENSGT00940000165840	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000009077.d	ENSGT00390000001014.ab	ENSGT00390000003526	ENSGT00950000182824.a.a.a.a.a	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742.b	ENSGT00530000063472.b.a	ENSGT00390000011228.b.b	ENSGT00390000004003	ENSGT00940000155765.s.a	ENSGT00940000154471.a.b.a.b.u.a
Characiphysae	ANCESTRAL SPECIES	25	ENSGT00940000156019.c.a	ENSGT00940000155209.lb.e	ENSGT00620000087961.a.b.b	ENSGT00620000087961.b	ENSGT00940000158437	ENSGT00940000158203	ENSGT00940000156681	ENSGT01030000234595.B.c.b	ENSGT00940000154983.c.a	ENSGT00390000010221.z	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000009077.d	ENSGT00390000001014.ab	ENSGT00390000003526	ENSGT00950000182824.a.a.a.a.a	ENSGT00940000154649.B.r	ENSGT00940000154649.B.q.a	ENSGT00940000157903	ENSGT00940000157742.b	ENSGT00530000063472.b.a	ENSGT00390000011228.b.b	ENSGT00390000004003	ENSGT00940000155765.s.a
Channel catfish	MODERN SPECIES	23	HGF (ENSIPUG00000007029)	CACNA2D1 (ENSIPUG00000006897)	ENSIPUG00000006873	ENSIPUG00000006863	sema3e (ENSIPUG00000006750)	sema3ab (ENSIPUG00000006565)	sema3d (ENSIPUG00000006546)	grm3 (ENSIPUG00000006501)	elapor2a (ENSIPUG00000006479)	tmem243a (ENSIPUG00000006469)	gan (ENSIPUG00000006434)	cmip (ENSIPUG00000006302)	PLCG2 (ENSIPUG00000006196)	tldc1 (ENSIPUG00000006165) #20	COTL1 (ENSIPUG00000006136) #21	klhl36 (ENSIPUG00000006104) #22	zgc:56622 (ENSIPUG00000006082)	tat (ENSIPUG00000006050)	ENSIPUG00000006039	pak1 (ENSIPUG00000006002)	aqp11 (ENSIPUG00000005985)	clns1a (ENSIPUG00000005935)	RSF1 (ENSIPUG00000005914)	aamdc (ENSIPUG00000005882)	ints4 (ENSIPUG00000005782)	KCTD14 (ENSIPUG00000005769)	rps3 (ENSIPUG00000005685)	ENSIPUG00000005660	fchsd2 (ENSIPUG00000005570)	P2RY2 (ENSIPUG00000005544)	P2RY2 (ENSIPUG00000005517)
Characiphysae_b	ANCESTRAL SPECIES	22	ENSGT00940000159260.g	ENSGT00940000156019.c.a	ENSGT00940000155209.lb.e	ENSGT00620000087961.a.b.b	ENSGT00940000158437	ENSGT00940000158203	ENSGT00940000156681	ENSGT01030000234595.B.c.b	ENSGT00940000154983.c.a	ENSGT00390000010221.z	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000009077.d	ENSGT00390000001014.ab	ENSGT00390000003526	ENSGT00950000182824.a.a.a.a.a	ENSGT00940000154649.B.r	ENSGT00940000154649.B.q.a	ENSGT00940000157903	ENSGT00940000157742.b	ENSGT00530000063472.b.a	ENSGT00390000011228.b.b	ENSGT00390000004003	ENSGT00940000155765.s.a
Electric eel	MODERN SPECIES	139	lepa (ENSEEEG00000010309)	lrrc4.2 (ENSEEEG00000010312)	HGF (ENSEEEG00000010313)	CACNA2D1 (ENSEEEG00000010316)	ENSEEEG00000010325	sema3e (ENSEEEG00000010379)	sema3ab (ENSEEEG00000010396)	sema3d (ENSEEEG00000010497)	grm3 (ENSEEEG00000010500)	elapor2a (ENSEEEG00000010504)	GAN (ENSEEEG00000010506)	CMIP (ENSEEEG00000010510)	plcg2 (ENSEEEG00000010526)	meak7 (ENSEEEG00000010921) #20	cotl1 (ENSEEEG00000010923) #21	klhl36 (ENSEEEG00000010925) #22	zgc:56622 (ENSEEEG00000010926)	tat (ENSEEEG00000010929)	ENSEEEG00000010931	zgc:112052 (ENSEEEG00000010933)	rxylt1 (ENSEEEG00000010935)	SRGAP1 (ENSEEEG00000010941)	parp12a (ENSEEEG00000010952)
Characoidei	ANCESTRAL SPECIES	13	ENSGT00940000156019.c.a	ENSGT00940000155209.lb.e	ENSGT00620000087961.a.b.b	ENSGT00620000087961.b	ENSGT00940000158437	ENSGT00940000158203	ENSGT00940000156681	ENSGT01030000234595.B.c.b	ENSGT00940000154983.c.a	ENSGT00390000010221.z	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000009077.d	ENSGT00390000001014.ab	ENSGT00390000003526	ENSGT00950000182824.a.a.a.a.a	ENSGT00940000154649.B.r	ENSGT00940000154649.B.q.a	ENSGT00940000157903	ENSGT00940000157742.b	ENSGT00530000063472.b.a	ENSGT00390000011228.b.b	ENSGT00390000004003	ENSGT00940000155765.s.a
Red-bellied piranha	MODERN SPECIES		ENSPNAG00000022756	HGF (ENSPNAG00000022744)	CACNA2D1 (ENSPNAG00000022699)	ENSPNAG00000022307	sema3e (ENSPNAG00000022177)	sema3ab (ENSPNAG00000022153)	sema3d (ENSPNAG00000022045)	grm3 (ENSPNAG00000022025)	elapor2a (ENSPNAG00000021987)	tmem243a (ENSPNAG00000021941)	GAN (ENSPNAG00000021919)	ENSPNAG00000021875	plcg2 (ENSPNAG00000021807)	meak7 (ENSPNAG00000021693) #20	cotl1 (ENSPNAG00000021674) #21	klhl36 (ENSPNAG00000021652) #22	zgc:56622 (ENSPNAG00000021612)	zgc:56622 (ENSPNAG00000021532)	zgc:56622 (ENSPNAG00000021493)	tat (ENSPNAG00000021482)	ENSPNAG00000021407	zgc:112052 (ENSPNAG00000021400)	UQCRFS1 (ENSPNAG00000021391)	rxylt1 (ENSPNAG00000021376)	SRGAP1 (ENSPNAG00000021355)	parp12a (ENSPNAG00000021230)	parp12a (ENSPNAG00000021181)	tbxas1 (ENSPNAG00000021175)	hipk2 (ENSPNAG00000021164)	ENSPNAG00000021086	fam107b (ENSPNAG00000020854)
Mexicana tetra	MODERN SPECIES	9	ENSAMXG00000043068	ENSAMXG00000041188	ENSAMXG00000042090	ENSAMXG00000038870	sema3e (ENSAMXG00000000874)	sema3ab (ENSAMXG00000000900)	sema3d (ENSAMXG00000000931)	grm3 (ENSAMXG00000000948)	elapor2a (ENSAMXG00000000958)	tmem243a (ENSAMXG00000038671)	GAN (ENSAMXG00000000968)	CMIP (ENSAMXG00000000971)	plcg2 (ENSAMXG00000000982)	meak7 (ENSAMXG00000000989) #20	cotl1 (ENSAMXG00000041084) #21	klhl36 (ENSAMXG00000000993) #22	zgc:56622 (ENSAMXG00000030151)	tat (ENSAMXG00000001000)	ENSAMXG00000037272	UQCRFS1 (ENSAMXG00000041728)	zgc:112052 (ENSAMXG00000036620)	rxylt1 (ENSAMXG00000001005)	SRGAP1 (ENSAMXG00000001013)	parp12a (ENSAMXG00000043787)	parp12a (ENSAMXG00000001021)	tbxas1 (ENSAMXG00000001025)	hipk2 (ENSAMXG00000001029)	ENSAMXG00000001032	fam107b (ENSAMXG00000043630)	nup205 (ENSAMXG00000001041)	ENSAMXG00000037307
Cyprinoidei	ANCESTRAL SPECIES	10	ENSGT00530000063956.b.a	ENSGT01030000235114	ENSGT00390000015057	ENSGT00940000153533.b	ENSGT00390000014299 #18	ENSGT00940000164450.b	ENSGT00940000156938.f #17	ENSGT00390000002381.b	ENSGT00940000166270.d	ENSGT00390000005410 #8	ENSGT00940000155218.B	ENSGT00390000018220	ENSGT00940000157517.i.a	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000009077.d	ENSGT00390000001014.ab	ENSGT00390000003526	ENSGT00950000182824.a.a.a.a.a	ENSGT00940000154649.B	ENSGT00940000157903	ENSGT00940000157742.b	ENSGT00530000063472.b.a	ENSGT00390000011228.b.b	ENSGT00390000004003	ENSGT00940000155765.s.a	ENSGT00940000154471.a.b.a.b.u.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	371										ENSGT00940000155273.e.b	ENSGT00390000018220.h	ENSGT00940000157517.i.b	ENSGT00940000157517.i.a.b	ENSGT00940000158087.i #20	ENSGT00390000012498.a #21	ENSGT00940000157543.i #22	ENSGT00940000166411	ENSGT00940000156704.f	ENSGT01060000248783.a.b	ENSGT00390000009077.d.c	ENSGT00390000001014.ab.a	ENSGT00390000003526.j	ENSGT00950000182824.a.a.a.a.a.a	ENSGT00940000154649.B.s	ENSGT00940000157903.o	ENSGT00940000157742.b.b	ENSGT00530000063472.b.a.c	ENSGT00390000011228.b.b.k	ENSGT00390000004003.d.a	ENSGT00940000155765.s.a.c	ENSGT00940000154471.a.b.a.b.u.a.b
Goldfish	MODERN SPECIES	37	tmem263 (ENSCARG00000038431)	si:ch73-62b13.1 (ENSCARG00000038422)	mterf2 (ENSCARG00000038411)	zgc:153031 (ENSCARG00000038381)	cry1b (ENSCARG00000038306)	ABTB3 (ENSCARG00000037451)	mlc1 (ENSCARG00000037214)	panx2 (ENSCARG00000037126)	trabd (ENSCARG00000037099)	GAN (ENSCARG00000037011)	CMIP (ENSCARG00000036708)	ENSCARG00000036521	plcg2 (ENSCARG00000036396)	meak7 (ENSCARG00000036367) #20	cotl1 (ENSCARG00000036354) #21	klhl36 (ENSCARG00000036341) #22	zgc:56622 (ENSCARG00000036307)	tat (ENSCARG00000036296)	ENSCARG00000036289	zgc:112052 (ENSCARG00000036284)	UQCRFS1 (ENSCARG00000036279)	rxylt1 (ENSCARG00000036270)	SRGAP1 (ENSCARG00000026412)	parp12a (ENSCARG00000026234)	tbxas1 (ENSCARG00000024586)	hipk2 (ENSCARG00000024457)	ENSCARG00000024412	fam107b (ENSCARG00000024386)	ENSCARG00000024357	ENSCARG00000024352	fgd4a (ENSCARG00000022853)
Cyprininae_a	ANCESTRAL SPECIES	337										ENSGT00940000155273.e.b	ENSGT00390000018220.h	ENSGT00940000157517.i.b	ENSGT00940000157517.i.a.b	ENSGT00940000158087.i #20	ENSGT00390000012498.a #21	ENSGT00940000157543.i #22	ENSGT00940000166411	ENSGT00940000156704.f	ENSGT01060000248783.a.b	ENSGT00390000009077.d.c	ENSGT00390000001014.ab.a	ENSGT00390000003526.j	ENSGT00950000182824.a.a.a.a.a.a	ENSGT00940000154649.B.s	ENSGT00940000157903.o	ENSGT00940000157742.b.b	ENSGT00530000063472.b.a.c	ENSGT00390000011228.b.b.k	ENSGT00390000004003.d.a	ENSGT00940000155765.s.a.c	ENSGT00940000154471.a.b.a.b.u.a.b
Common carp reference	MODERN SPECIES	9	ENSCCRG00000059741	ENSCCRG00000071277	kcng4a (ENSCCRG00000071413) #17	ENSCCRG00000076308	ENSCCRG00000069488	ENSCCRG00000057858	hsbp1b (ENSCCRG00000080166) #7	ENSCCRG00000025982	mlycd (ENSCCRG00000059019) #8	ENSCCRG00000010604	ENSCCRG00000010594	ENSCCRG00000010492	ENSCCRG00000010460	plcg2 (ENSCCRG00000025028)	cotl1 (ENSCCRG00000056927) #21	klhl36 (ENSCCRG00000002713) #22	zgc:56622 (ENSCCRG00000082219)	tat (ENSCCRG00000009152)	ENSCCRG00000009297	zgc:112052 (ENSCCRG00000009301)	ENSCCRG00000073141	ENSCCRG00000022730	parp12a (ENSCCRG00000023927)	tbxas1 (ENSCCRG00000023933)	hipk2 (ENSCCRG00000000664)	ENSCCRG00000023982	fam107b (ENSCCRG00000046596)	nup205 (ENSCCRG00000014568)	fgd4a (ENSCCRG00000077913)	ENSCCRG00000053934	slc23a4 (ENSCCRG00000064888)
Golden-line barbel	MODERN SPECIES	87										GAN (ENSSGRG00000031733)	CMIP (ENSSGRG00000031735)	ENSSGRG00000031750	plcg2 (ENSSGRG00000031752)	meak7 (ENSSGRG00000031758) #20	cotl1 (ENSSGRG00000031759) #21	klhl36 (ENSSGRG00000031760) #22	tat (ENSSGRG00000031765)	ENSSGRG00000032237	zgc:112052 (ENSSGRG00000032238)	UQCRFS1 (ENSSGRG00000032239)	rxylt1 (ENSSGRG00000032240)	SRGAP1 (ENSSGRG00000032241)	parp12a (ENSSGRG00000032579)	tbxas1 (ENSSGRG00000032617)	hipk2 (ENSSGRG00000032873)	ENSSGRG00000033545	fam107b (ENSSGRG00000033546)	nup205 (ENSSGRG00000033571)	fgd4a (ENSSGRG00000034713)	ENSSGRG00000035116	slc23a4 (ENSSGRG00000035117)
Cyprininae	ANCESTRAL SPECIES	49	ENSGT00390000015057.g	ENSGT00940000153533.b.b	ENSGT00390000014299.g #18	ENSGT00940000164450.b.a	ENSGT00940000156938.f.a #17	ENSGT00390000002381.b.b	ENSGT00390000006293.n.b.b #7	ENSGT00940000166270.d	ENSGT00390000005410.c #8	ENSGT00940000155218.B.m	ENSGT00940000155273.e.a	ENSGT00390000018220.g	ENSGT00940000157517.i.a.a	ENSGT00940000158087.j #20	ENSGT00390000012498.b #21	ENSGT00940000157543.j #22	ENSGT00940000156704.e	ENSGT01060000248783.a.a	ENSGT00390000009077.d.d	ENSGT00390000001014.ab.b	ENSGT00390000003526.i	ENSGT00950000182824.a.a.a.a.a.b	ENSGT00940000154649.B.t	ENSGT00940000157903.p	ENSGT00940000157742.b.a	ENSGT00530000063472.b.a.d	ENSGT00390000011228.b.b.l	ENSGT00390000004003.d.b	ENSGT00940000155765.s.a.d	ENSGT00940000154471.a.b.a.b.u.a.a	ENSGT00950000182953.B.a.i.d
Cyprininae_a	ANCESTRAL SPECIES	25	ENSGT00390000015057.g	ENSGT00940000153533.b.b	ENSGT00390000014299.g #18	ENSGT00940000164450.b.a	ENSGT00940000156938.f.a #17	ENSGT00390000002381.b.b	ENSGT00390000006293.n.b.b #7	ENSGT00940000166270.d	ENSGT00390000005410.c #8	ENSGT00940000155218.B.m	ENSGT00940000155273.e.a	ENSGT00390000018220.g	ENSGT00940000157517.i.a.a	ENSGT00940000158087.j #20	ENSGT00390000012498.b #21	ENSGT00940000157543.j #22	ENSGT00940000156704.e	ENSGT01060000248783.a.a	ENSGT00390000009077.d.d	ENSGT00390000001014.ab.b	ENSGT00390000003526.i	ENSGT00950000182824.a.a.a.a.a.b	ENSGT00940000154649.B.t	ENSGT00940000157903.p	ENSGT00940000157742.b.a	ENSGT00530000063472.b.a.d	ENSGT00390000011228.b.b.l	ENSGT00390000004003.d.b	ENSGT00940000155765.s.a.d	ENSGT00940000154471.a.b.a.b.u.a.a	ENSGT00950000182953.B.a.i.d
Common carp reference	MODERN SPECIES	19	vps9d1 (ENSCCRG00000017871)	utp4 (ENSCCRG00000017768)	wfdc1 (ENSCCRG00000017763) #18	ENSCCRG00000011764	kcng4a (ENSCCRG00000055874) #17	ENSCCRG00000011757	hsbp1b (ENSCCRG00000011750) #7	ENSCCRG00000010744	mlycd (ENSCCRG00000055883) #8	ENSCCRG00000011783	ENSCCRG00000012578	ENSCCRG00000013153	COTL1 (ENSCCRG00000073190) #21	plcg2 (ENSCCRG00000036344)	meak7 (ENSCCRG00000036322) #20	klhl36 (ENSCCRG00000060551) #22	tat (ENSCCRG00000022064)	ENSCCRG00000060503	zgc:112052 (ENSCCRG00000070658)	ENSCCRG00000054465	ENSCCRG00000009344	ENSCCRG00000076944	parp12a (ENSCCRG00000023959)	tbxas1 (ENSCCRG00000053498)	hipk2 (ENSCCRG00000002774)	ENSCCRG00000023975	fam107b (ENSCCRG00000061182)	nup205 (ENSCCRG00000046551)	ENSCCRG00000078304	ENSCCRG00000076505	slc23a4 (ENSCCRG00000045850)
Golden-line barbel	MODERN SPECIES	698											GAN (ENSSGRG00000013981)	CMIP (ENSSGRG00000013987)	plcg2 (ENSSGRG00000014005)	meak7 (ENSSGRG00000014208) #20	cotl1 (ENSSGRG00000014210) #21	klhl36 (ENSSGRG00000014211) #22	zgc:56622 (ENSSGRG00000014212)	tat (ENSSGRG00000014220)	zgc:112052 (ENSSGRG00000014870)	UQCRFS1 (ENSSGRG00000014871)	rxylt1 (ENSSGRG00000014873)	SRGAP1 (ENSSGRG00000014902)	ENSSGRG00000016721	parp12a (ENSSGRG00000016722)	tbxas1 (ENSSGRG00000016723)
Goldfish	MODERN SPECIES	9	utp4 (ENSCARG00000003247)	wfdc1 (ENSCARG00000003234) #18	ENSCARG00000003224	kcng4a (ENSCARG00000003216) #17	ENSCARG00000003212	ENSCARG00000003206	hsbp1b (ENSCARG00000003196) #7	ENSCARG00000003030	mlycd (ENSCARG00000002988) #8	CDH13 (ENSCARG00000002900)	GAN (ENSCARG00000002843)	CMIP (ENSCARG00000002515)	plcg2 (ENSCARG00000002418)	meak7 (ENSCARG00000002355) #20	cotl1 (ENSCARG00000002341) #21	klhl36 (ENSCARG00000002326) #22	tat (ENSCARG00000002075)	ENSCARG00000002015	ENSCARG00000001998	zgc:112052 (ENSCARG00000001988)	UQCRFS1 (ENSCARG00000019476)	rxylt1 (ENSCARG00000019461)	ENSCARG00000019454	SRGAP1 (ENSCARG00000018400)	parp12a (ENSCARG00000018278)	tbxas1 (ENSCARG00000016708)	hipk2 (ENSCARG00000016609)	ENSCARG00000016570	fam107b (ENSCARG00000016548)	nup205 (ENSCARG00000016407)	ENSCARG00000014770
Zebrafish	MODERN SPECIES	9	vps9d1 (ENSDARG00000019195)	utp4 (ENSDARG00000017675)	wfdc1 (ENSDARG00000058003) #18	ENSDARG00000013775	kcng4a (ENSDARG00000062967) #17	ENSDARG00000062964	hsbp1b (ENSDARG00000041921) #7	ENSDARG00000004529	mlycd (ENSDARG00000104732) #8	CDH13 (ENSDARG00000014215)	CMIP (ENSDARG00000062933)	ENSDARG00000092862	meak7 (ENSDARG00000062951) #20	plcg2 (ENSDARG00000068763)	cotl1 (ENSDARG00000026829) #21	klhl36 (ENSDARG00000030251) #22	zgc:56622 (ENSDARG00000099728)	tat (ENSDARG00000069630)	C7H19orf12 (ENSDARG00000058857)	GAN (ENSDARG00000100875)	rxylt1 (ENSDARG00000063414)	SRGAP1 (ENSDARG00000007461)	parp12a (ENSDARG00000042496)	tbxas1 (ENSDARG00000002249)	hipk2 (ENSDARG00000042518)	ENSDARG00000063361	fam107b (ENSDARG00000026865)	nup205 (ENSDARG00000042530)	fgd4a (ENSDARG00000101471)	BICD1 (ENSDARG00000079496)	slc23a4 (ENSDARG00000052497)
Euteleosteomorpha	ANCESTRAL SPECIES	1	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000166375	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000235114	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a	ENSGT00390000003058.b.a.b
Acanthomorphata	ANCESTRAL SPECIES	41	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT00960000187029	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a
Cod	MODERN SPECIES	22	has3 (ENSGMOG00000014348)	TANGO6 (ENSGMOG00000014362)	ENSGMOG00000031470	zc3h18 (ENSGMOG00000015433)	trhr2 (ENSGMOG00000015189)	zfpm1 (ENSGMOG00000031027)	ces3 (ENSGMOG00000000154)	kiaa0513 (ENSGMOG00000002337) #26	ENSGMOG00000032692 #37	ENSGMOG00000025504	ENSGMOG00000002280	ENSGMOG00000002227	plcg2 (ENSGMOG00000004227)	meak7 (ENSGMOG00000004193) #20	cotl1 (ENSGMOG00000004183) #21	klhl36 (ENSGMOG00000028672) #22	zgc:56622 (ENSGMOG00000004158)	tat (ENSGMOG00000004127)	pdf (ENSGMOG00000004104)	ENSGMOG00000029471	ENSGMOG00000030806	vps9d1 (ENSGMOG00000003989)	ENSGMOG00000023547	znf276 (ENSGMOG00000003784)	ENSGMOG00000003772	ENSGMOG00000023590	ENSGMOG00000031181	ENSGMOG00000034260	ENSGMOG00000026083	ENSGMOG00000031070	ENSGMOG00000029613
Euacanthomorphacea	ANCESTRAL SPECIES	30	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000178458	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a
Pinecone sodierfish	MODERN SPECIES	20	DBX1 (ENSMMDG00005021117)	ENSMMDG00005021119	dnaaf4 (ENSMMDG00005021122)	anpepb.1 (ENSMMDG00005021130)	ANPEP (ENSMMDG00005021145)	zgc:162634 (ENSMMDG00005004024)	galnt18a (ENSMMDG00005004043)	ENSMMDG00005004417	ENSMMDG00005004435	ENSMMDG00005004458	far1 (ENSMMDG00005004477)	DKK3 (ENSMMDG00005004505)	plcg2 (ENSMMDG00005004521)	meak7 (ENSMMDG00005004541) #20	cotl1 (ENSMMDG00005004554) #21	klhl36 (ENSMMDG00005004561) #22	zgc:56622 (ENSMMDG00005004567)	tat (ENSMMDG00005004602)	pdf (ENSMMDG00005004607)	ENSMMDG00005004611	ENSMMDG00005004613	vps9d1 (ENSMMDG00005004617)	ENSMMDG00005004630	znf276 (ENSMMDG00005004633)	FANCA (ENSMMDG00005004646)	ENSMMDG00005004664	slc10a3 (ENSMMDG00005004669)	chmp1a (ENSMMDG00005004672)	cdk10 (ENSMMDG00005004718)	vps4a (ENSMMDG00005005556)	SNTB2 (ENSMMDG00005007964)
Percomorphaceae	ANCESTRAL SPECIES	4	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000178458	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a
Percomorphaceae_B	ANCESTRAL SPECIES	5	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000178458	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319
Ovalentaria	ANCESTRAL SPECIES	7	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00390000004877	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000178458	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319
Ovalentaria_B	ANCESTRAL SPECIES	3	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00390000004877	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n
Cichlidae	ANCESTRAL SPECIES	34	ENSGT01030000234588.b.b.b.b.a.a.a	ENSGT01030000234858	ENSGT00940000160892	ENSGT00550000074844	ENSGT01040000240400.c.a.b.a.b.a.a.b.b	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00390000004877	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000178458	ENSGT00390000015057	ENSGT01030000234925	ENSGT00530000063956.b.a	ENSGT00390000018698	ENSGT01060000248721	ENSGT00940000156704	ENSGT00610000087446	ENSGT00390000015889	ENSGT00940000155456.f	ENSGT00940000155044.B	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a	ENSGT00950000182939.a.b.b
Midas cichlid	MODERN SPECIES	740										ENSACIG00000015315	GAN (ENSACIG00000015288)	CMIP (ENSACIG00000015230)	plcg2 (ENSACIG00000015174)	meak7 (ENSACIG00000015149) #20	cotl1 (ENSACIG00000015139) #21	klhl36 (ENSACIG00000015118) #22	zgc:56622 (ENSACIG00000015094)	ENSACIG00000015092	vps9d1 (ENSACIG00000015034)	ENSACIG00000015013	ENSACIG00000014999	pdf (ENSACIG00000014977)	ENSACIG00000014970	tat (ENSACIG00000014941)	PIGY (ENSACIG00000014936)	zgc:162634 (ENSACIG00000014926)
Pseudocrenilabrinae	ANCESTRAL SPECIES	24	ENSGT01030000234588.b.b.b.b.a.a.a	ENSGT01030000234858	ENSGT00940000160892	ENSGT00550000074844	ENSGT01040000240400.c.a.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00390000004877	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000178458	ENSGT00390000015057	ENSGT01030000234925	ENSGT00530000063956.b.a	ENSGT00390000018698	ENSGT01060000248721	ENSGT00940000156704	ENSGT00390000015889	ENSGT00940000155456.f	ENSGT00950000182996.b.b.c.b.b.b.a.a.a	ENSGT00940000155044.B	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a	ENSGT00950000182939.a.b.b
Nile tilapia	DUPLICATION
Nile tilapia	MODERN SPECIES	7	GPR143 (ENSONIG00000016023)	tbl1x (ENSONIG00000016020)	ANOS1 (ENSONIG00000016014)	ENSONIG00000036502	ENSONIG00000016013	ENSONIG00000042158	igsf3 (ENSONIG00000016010)	rpe (ENSONIG00000016008)	nhlh2 (ENSONIG00000020673)	vangl1 (ENSONIG00000016004)	casq2 (ENSONIG00000027104)	KCNE2 (ENSONIG00000040885)	SLC5A3 (ENSONIG00000020671)	DOP1B (ENSONIG00000015987)	chaf1b (ENSONIG00000015981)	ENSONIG00000035799 #22	bcl9 (ENSONIG00000015978)	acp6 (ENSONIG00000015974)	gja5a (ENSONIG00000020670)	gja8a (ENSONIG00000020669)	ENSONIG00000003472	ENSONIG00000015143	ENSONIG00000041854	ENSONIG00000035487	ENSONIG00000032917	ENSONIG00000015970	ENSONIG00000035979	zgc:194679 (ENSONIG00000014405)	ENSONIG00000014406	ENSONIG00000037699	ENSONIG00000031439
Nile tilapia	MODERN SPECIES	19	dldh (ENSONIG00000010769)	ENSONIG00000028992	ENSONIG00000030669	ENSONIG00000010767	zfpm1 (ENSONIG00000035110)	ENSONIG00000010760	ENSONIG00000034024	ENSONIG00000041520	slc13a1 (ENSONIG00000010754)	kiaa0513 (ENSONIG00000010750) #26	foxl1 (ENSONIG00000030034) #37	GAN (ENSONIG00000010745)	CMIP (ENSONIG00000010739)	meak7 (ENSONIG00000010723) #20	plcg2 (ENSONIG00000010726)	klhl36 (ENSONIG00000010716) #22	zgc:56622 (ENSONIG00000010709)	vps9d1 (ENSONIG00000010706)	ENSONIG00000032071	ENSONIG00000010702	pdf (ENSONIG00000010700)	ENSONIG00000042349	tat (ENSONIG00000010695)	zgc:162634 (ENSONIG00000031231)	galnt18a (ENSONIG00000030492)	ENSONIG00000041488	slc12a3 (ENSONIG00000010663)	herpud1 (ENSONIG00000010662)	cetp (ENSONIG00000010658)	ENSONIG00000041959	ENSONIG00000038636
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	30	ENSGT01030000234588.b.b.b.b.a.a.a	ENSGT01030000234858	ENSGT00940000160892	ENSGT00550000074844	ENSGT01040000240400.c.a.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00390000004877	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000178458	ENSGT00390000015057	ENSGT01030000234925	ENSGT00530000063956.b.a	ENSGT00390000018698	ENSGT01060000248721	ENSGT00940000156704	ENSGT00390000015889	ENSGT00940000155456.f	ENSGT00950000182996.b.b.c.b.b.b.a.a.a	ENSGT00940000155044.B	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a	ENSGT00950000182939.a.b.b
Lyretail cichlid	DUPLICATION
Lyretail cichlid	MODERN SPECIES	303	ENSNBRG00000008279	ENSNBRG00000008187	ENSNBRG00000008150	igsf3 (ENSNBRG00000008087)	rpe (ENSNBRG00000008060)	ackr3a (ENSNBRG00000008055)	nhlh2 (ENSNBRG00000008044)	vangl1 (ENSNBRG00000008009)	casq2 (ENSNBRG00000007969)	KCNE2 (ENSNBRG00000007957)	SLC5A3 (ENSNBRG00000007950)	DOP1B (ENSNBRG00000007812)	ENSNBRG00000007753	ENSNBRG00000007734	chaf1b (ENSNBRG00000007708)	ENSNBRG00000007688 #22	bcl9 (ENSNBRG00000007614)	acp6 (ENSNBRG00000007530)	gja5a (ENSNBRG00000007508)	gja8a (ENSNBRG00000007490)	ENSNBRG00000007484	ENSNBRG00000007459	ENSNBRG00000007422	ENSNBRG00000007418	ENSNBRG00000007391	ENSNBRG00000007371	ENSNBRG00000007352	ENSNBRG00000007337	ENSNBRG00000007322	ENSNBRG00000007312	fstl1b (ENSNBRG00000007282)
Lyretail cichlid	MODERN SPECIES	402				ENSNBRG00000016459	ENSNBRG00000016471	ENSNBRG00000016481	ENSNBRG00000016491	kiaa0513 (ENSNBRG00000016505) #26	foxl1 (ENSNBRG00000016546) #37	ENSNBRG00000016558	ENSNBRG00000016567	ENSNBRG00000016580	plcg2 (ENSNBRG00000016653)	meak7 (ENSNBRG00000016784) #20	cotl1 (ENSNBRG00000016810) #21	klhl36 (ENSNBRG00000016825) #22	zgc:56622 (ENSNBRG00000016847)	ENSNBRG00000016861	vps9d1 (ENSNBRG00000016884)	ENSNBRG00000016983	ENSNBRG00000016999	pdf (ENSNBRG00000017010)	ENSNBRG00000017017	tat (ENSNBRG00000017026)	PIGY (ENSNBRG00000017047)	galnt18a (ENSNBRG00000017054)	slc12a3 (ENSNBRG00000017195)	ENSNBRG00000017634	cetp (ENSNBRG00000017643)	chka (ENSNBRG00000017689)	TMED6 (ENSNBRG00000017737)
Haplochromini	ANCESTRAL SPECIES	27	ENSGT00940000160892	ENSGT00550000074844	ENSGT01040000240400.c.a.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT01030000234550.a.a.d.a.a.h	ENSGT01030000234550.a.a.d.a.a.g	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00390000004877	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000178458	ENSGT00390000015057	ENSGT01030000234925	ENSGT00530000063956.b.a	ENSGT00390000018698	ENSGT01060000248721	ENSGT00940000156704	ENSGT00390000015889	ENSGT00940000155456.f	ENSGT00950000182996.b.b.c.b.b.b.a.a.a	ENSGT00940000155044.B	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a	ENSGT00950000182939.a.b.b
Haplochromini_A	ANCESTRAL SPECIES	25	ENSGT00940000160892	ENSGT00550000074844	ENSGT01040000240400.c.a.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT01030000234550.a.a.d.a.a.h	ENSGT01030000234550.a.a.d.a.a.g	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00390000004877	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000178458	ENSGT00390000015057	ENSGT01030000234925	ENSGT00530000063956.b.a	ENSGT00390000018698	ENSGT01060000248721	ENSGT00940000156704	ENSGT00390000015889	ENSGT00940000155456.f	ENSGT00950000182996.b.b.c.b.b.b.a.a.a	ENSGT00940000155044.B	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a	ENSGT00950000182939.a.b.b
P. nyererei	MODERN SPECIES	513		ENSPNYG00000006500	zfpm1 (ENSPNYG00000006516)	ces3 (ENSPNYG00000006596)	slc13a1 (ENSPNYG00000006774)	slc13a1 (ENSPNYG00000006849)	kiaa0513 (ENSPNYG00000006902) #26	foxl1 (ENSPNYG00000006944) #37	ENSPNYG00000006954	GAN (ENSPNYG00000006972)	CMIP (ENSPNYG00000007031)	plcg2 (ENSPNYG00000007118)	meak7 (ENSPNYG00000007362) #20	cotl1 (ENSPNYG00000007376) #21	zgc:56622 (ENSPNYG00000007404)	klhl36 (ENSPNYG00000007440) #22	ENSPNYG00000007475	ENSPNYG00000007483	ENSPNYG00000007491	ENSPNYG00000007518	pdf (ENSPNYG00000007534)	ENSPNYG00000007549	tat (ENSPNYG00000007558)	zgc:162634 (ENSPNYG00000007586)	galnt18a (ENSPNYG00000007610)	slc12a3 (ENSPNYG00000007655)	herpud1 (ENSPNYG00000007704)	cetp (ENSPNYG00000007719)	chka (ENSPNYG00000007735)
Haplochromini_B	ANCESTRAL SPECIES	30	ENSGT00940000160892	ENSGT00550000074844	ENSGT01040000240400.c.a.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT01030000234550.a.a.d.a.a.h	ENSGT01030000234550.a.a.d.a.a.g	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00390000004877	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000178458	ENSGT00390000015057	ENSGT01030000234925	ENSGT00530000063956.b.a	ENSGT00390000018698	ENSGT01060000248721	ENSGT00940000156704	ENSGT00390000015889	ENSGT00940000155456.f	ENSGT00950000182996.b.b.c.b.b.b.a.a.a.a	ENSGT00940000155044.B	ENSGT00390000017671.b	ENSGT01100000263545.a.b.d.a	ENSGT00950000182939.a.b.b
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	1098	ENSMZEG00005002195	ENSMZEG00005002171	igsf3 (ENSMZEG00005002160)	rpe (ENSMZEG00005002138)	ackr3a (ENSMZEG00005002132)	nhlh2 (ENSMZEG00005002125)	vangl1 (ENSMZEG00005002094)	casq2 (ENSMZEG00005002075)	KCNE2 (ENSMZEG00005002067)	SLC5A3 (ENSMZEG00005002056)	ENSMZEG00005002052	DOP1B (ENSMZEG00005001983)	ENSMZEG00005001951	ENSMZEG00005001945	chaf1b (ENSMZEG00005001892)	ENSMZEG00005001866 #22	bcl9 (ENSMZEG00005001856)	acp6 (ENSMZEG00005001843)	gja5a (ENSMZEG00005001838)	gja8a (ENSMZEG00005001816)	ENSMZEG00005001804	ENSMZEG00005001797	ENSMZEG00005001772	ENSMZEG00005001752	ENSMZEG00005001730	ENSMZEG00005001712	ENSMZEG00005001679	ENSMZEG00005001652	ENSMZEG00005001640	zgc:194679 (ENSMZEG00005001637)	fstl1b (ENSMZEG00005001592)
Zebra mbuna	MODERN SPECIES	1110	ENSMZEG00005016163	zfpm1 (ENSMZEG00005016182)	ces3 (ENSMZEG00005016193)	slc13a1 (ENSMZEG00005016201)	ENSMZEG00005016206	slc13a1 (ENSMZEG00005016213)	kiaa0513 (ENSMZEG00005016224) #26	foxl1 (ENSMZEG00005016238) #37	ENSMZEG00005016243	GAN (ENSMZEG00005016250)	CMIP (ENSMZEG00005016284)	plcg2 (ENSMZEG00005000123)	ENSMZEG00005000142	meak7 (ENSMZEG00005000154) #20	cotl1 (ENSMZEG00005000167) #21	klhl36 (ENSMZEG00005000205) #22	zgc:56622 (ENSMZEG00005000274)	ENSMZEG00005000313	vps9d1 (ENSMZEG00005000331)	ENSMZEG00005000354	ENSMZEG00005000383	ENSMZEG00005000397	pdf (ENSMZEG00005000424)	tat (ENSMZEG00005000436)	zgc:162634 (ENSMZEG00005000487)	galnt18a (ENSMZEG00005000508)	ENSMZEG00005000565	ENSMZEG00005000573	znf277 (ENSMZEG00005000593)	ENSMZEG00005000663	spg11 (ENSMZEG00005000719)
Eastern happy	DUPLICATION
Eastern happy	MODERN SPECIES	7	ENSACLG00000005794	ENSACLG00000005779	ENSACLG00000005759	ENSACLG00000005742	igsf3 (ENSACLG00000005518)	rpe (ENSACLG00000005497)	ackr3a (ENSACLG00000005485)	nhlh2 (ENSACLG00000005482)	vangl1 (ENSACLG00000005437)	casq2 (ENSACLG00000005396)	KCNE2 (ENSACLG00000005384)	SLC5A3 (ENSACLG00000005376)	DOP1B (ENSACLG00000005329)	morc3a (ENSACLG00000005265)	chaf1b (ENSACLG00000005219)	ENSACLG00000005189 #22	bcl9 (ENSACLG00000005177)	acp6 (ENSACLG00000005168)	gja5a (ENSACLG00000005160)	gja8a (ENSACLG00000005156)	ENSACLG00000005109	ENSACLG00000005060	ENSACLG00000005039	ENSACLG00000004802	ENSACLG00000004777	ENSACLG00000004757	ENSACLG00000004714	ENSACLG00000004685	ENSACLG00000004675	ENSACLG00000004669	ENSACLG00000004630
Eastern happy	MODERN SPECIES	19	zfpm1 (ENSACLG00000001201)	ces3 (ENSACLG00000001188)	ENSACLG00000001179	ENSACLG00000001172	ENSACLG00000001165	ENSACLG00000001131	slc13a1 (ENSACLG00000001095)	kiaa0513 (ENSACLG00000000993) #26	foxl1 (ENSACLG00000000884) #37	ENSACLG00000000869	GAN (ENSACLG00000000819)	CMIP (ENSACLG00000000732)	plcg2 (ENSACLG00000000692)	meak7 (ENSACLG00000000686) #20	cotl1 (ENSACLG00000000664) #21	klhl36 (ENSACLG00000000630) #22	zgc:56622 (ENSACLG00000000605)	vps9d1 (ENSACLG00000000572)	ENSACLG00000000208	ENSACLG00000024607	pdf (ENSACLG00000024630)	ENSACLG00000024594	tat (ENSACLG00000024554)	zgc:162634 (ENSACLG00000024539)	galnt18a (ENSACLG00000024512)	ENSACLG00000024452	slc12a3 (ENSACLG00000024371)	herpud1 (ENSACLG00000024345)	cetp (ENSACLG00000024326)	chka (ENSACLG00000024309)	znf277 (ENSACLG00000023999)
Burton s mouthbrooder	DUPLICATION
Burton s mouthbrooder	MODERN SPECIES	311	ENSHBUG00000023298	ENSHBUG00000023333	igsf3 (ENSHBUG00000023347)	rpe (ENSHBUG00000023369)	ackr3a (ENSHBUG00000023373)	ENSHBUG00000023391	nhlh2 (ENSHBUG00000023405)	vangl1 (ENSHBUG00000023475)	casq2 (ENSHBUG00000023521)	KCNE2 (ENSHBUG00000023528)	SLC5A3 (ENSHBUG00000023535)	ENSHBUG00000023545	DOP1B (ENSHBUG00000023676)	morc3a (ENSHBUG00000023707)	chaf1b (ENSHBUG00000023806)	ENSHBUG00000023836 #22	bcl9 (ENSHBUG00000001527)	acp6 (ENSHBUG00000001532)	gja5a (ENSHBUG00000001539)	gja8a (ENSHBUG00000001540)	ENSHBUG00000001548
Burton s mouthbrooder	MODERN SPECIES	495			ENSHBUG00000018231	zfpm1 (ENSHBUG00000018289)	ces3 (ENSHBUG00000018302)	ENSHBUG00000018337	slc13a1 (ENSHBUG00000000540)	kiaa0513 (ENSHBUG00000018454) #26	foxl1 (ENSHBUG00000018482) #37	ENSHBUG00000018507	GAN (ENSHBUG00000018554)	CMIP (ENSHBUG00000018662)	plcg2 (ENSHBUG00000018683)	meak7 (ENSHBUG00000018703) #20	cotl1 (ENSHBUG00000018725) #21	klhl36 (ENSHBUG00000018751) #22	zgc:56622 (ENSHBUG00000018768)	ENSHBUG00000018797	vps9d1 (ENSHBUG00000018818)	ENSHBUG00000018832	pdf (ENSHBUG00000018841)	ENSHBUG00000018858	tat (ENSHBUG00000018907)	zgc:162634 (ENSHBUG00000018915)	galnt18a (ENSHBUG00000019040)	slc12a3 (ENSHBUG00000019106)	herpud1 (ENSHBUG00000019113)	cetp (ENSHBUG00000019121)
Pomacentridae	ANCESTRAL SPECIES	43	ENSGT00940000153533.b.f	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000165840	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000250195	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n
Bicolor damselfish	MODERN SPECIES	1129							CHST8 (ENSSPAG00000023428)	kctd15a (ENSSPAG00000023426)	ENSSPAG00000023424	lsm14aa (ENSSPAG00000023422)	gpia (ENSSPAG00000023420)	hsd17b2 (ENSSPAG00000023414)	mphosph6 (ENSSPAG00000023413)	ENSSPAG00000023411	cotl1 (ENSSPAG00000023410) #21	klhl36 (ENSSPAG00000023409) #22	zgc:56622 (ENSSPAG00000023408)	tat (ENSSPAG00000023407)	ENSSPAG00000023405	pdf (ENSSPAG00000023403)	ENSSPAG00000023402	ENSSPAG00000023400	vps9d1 (ENSSPAG00000023398)	znf276 (ENSSPAG00000023396)	chmp1a (ENSSPAG00000023395)	ENSSPAG00000023394	cdk10 (ENSSPAG00000023392)
Pomacentridae_A	ANCESTRAL SPECIES	56	ENSGT00390000010337.B.a.a	ENSGT00400000025006	ENSGT00940000153533.b.f	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00940000157517.l	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000250195	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n	ENSGT00390000003058.b.a.b	ENSGT00970000193565.g
Amphiprion	ANCESTRAL SPECIES	73	ENSGT00400000025006	ENSGT00940000153533.b.f.a	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00940000165840	ENSGT00940000157517.l	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000250195	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n	ENSGT00390000003058.b.a.b	ENSGT00970000193565.g
Orange clownfish	MODERN SPECIES	18	ENSAPEG00000005439	ENSAPEG00000005471	zc3h18 (ENSAPEG00000005491)	trhr2 (ENSAPEG00000005509)	zfpm1 (ENSAPEG00000005596)	ces3 (ENSAPEG00000005688)	kiaa0513 (ENSAPEG00000005757) #26	foxl1 (ENSAPEG00000005843) #37	ENSAPEG00000005862	GAN (ENSAPEG00000005883)	ENSAPEG00000005936	ENSAPEG00000005949	plcg2 (ENSAPEG00000006014)	meak7 (ENSAPEG00000006095) #20	cotl1 (ENSAPEG00000006109) #21	klhl36 (ENSAPEG00000006132) #22	zgc:56622 (ENSAPEG00000006173)	tat (ENSAPEG00000006198)	ENSAPEG00000006244	pdf (ENSAPEG00000006258)	ENSAPEG00000006276	vps9d1 (ENSAPEG00000006328)	znf276 (ENSAPEG00000006394)	slc10a3 (ENSAPEG00000006445)	chmp1a (ENSAPEG00000006460)	ENSAPEG00000006483	cdk10 (ENSAPEG00000006511)	vps4a (ENSAPEG00000006568)	SNTB2 (ENSAPEG00000006633)	spire2 (ENSAPEG00000006684)	ENSAPEG00000006764
Clown anemonefish	MODERN SPECIES	3500													plcg2 (ENSAOCG00000005464)	meak7 (ENSAOCG00000005440) #20	cotl1 (ENSAOCG00000005422) #21	klhl36 (ENSAOCG00000005409) #22	zgc:56622 (ENSAOCG00000005380)	tat (ENSAOCG00000005349)	ENSAOCG00000005327	pdf (ENSAOCG00000005316)
Spiny chromis	DUPLICATION
Spiny chromis	MODERN SPECIES	469							nhlh2 (ENSAPOG00000002819)	vangl1 (ENSAPOG00000002844)	casq2 (ENSAPOG00000002876)	KCNE2 (ENSAPOG00000002888)	SLC5A3 (ENSAPOG00000002894)	DOP1B (ENSAPOG00000003000)	ENSAPOG00000003043	ENSAPOG00000003055	chaf1b (ENSAPOG00000003088)	ENSAPOG00000003097 #22	bcl9 (ENSAPOG00000003113)	acp6 (ENSAPOG00000003134)	gja5a (ENSAPOG00000003144)	rho (ENSAPOG00000003170)	MAGI1 (ENSAPOG00000003337)	ren (ENSAPOG00000003412)	ENSAPOG00000003429	FMOD (ENSAPOG00000003439)	mapkapk2b (ENSAPOG00000003470)	eif2d (ENSAPOG00000003524)
Spiny chromis	MODERN SPECIES	1213													plcg2 (ENSAPOG00000007516)	meak7 (ENSAPOG00000007491) #20	cotl1 (ENSAPOG00000007472) #21	klhl36 (ENSAPOG00000007444) #22
Atherinomorphae	ANCESTRAL SPECIES	5	ENSGT00940000160637	ENSGT00940000162283.a	ENSGT00940000156939.f	ENSGT00940000167365	ENSGT00390000016353	ENSGT00390000002197	ENSGT00950000182967	ENSGT00390000008673	ENSGT01090000260267	ENSGT00940000157894	ENSGT00390000015052	ENSGT00940000156011	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000178458	ENSGT00970000193565	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102
Cyprinodontiformes	ANCESTRAL SPECIES	6	ENSGT00940000160637	ENSGT00940000162283.a	ENSGT00940000156939.f	ENSGT00940000167365	ENSGT00390000016353	ENSGT00390000002197	ENSGT00950000182967	ENSGT00390000008673	ENSGT01090000260267	ENSGT00940000157894	ENSGT00390000015052	ENSGT00940000156011	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000178458	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319
Aplocheiloidei	ANCESTRAL SPECIES	1	ENSGT00940000160637	ENSGT00940000162283.a	ENSGT00940000156939.f	ENSGT00940000167365	ENSGT00390000016353	ENSGT00390000002197	ENSGT00950000182967	ENSGT00390000008673	ENSGT01090000260267	ENSGT00940000157894	ENSGT00390000015052	ENSGT00940000156011	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000178458	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n
Mangrove rivulus	MODERN SPECIES	45	ENSKMAG00000021458	ENSKMAG00000021441	MMP15 (ENSKMAG00000021436)	zpd (ENSKMAG00000021421)	nup93 (ENSKMAG00000021385)	steep1 (ENSKMAG00000021367)	mt2 (ENSKMAG00000021361)	anapc13 (ENSKMAG00000021355)	ENSKMAG00000021345	rspry1 (ENSKMAG00000021328)	arl2bp (ENSKMAG00000021314)	pllp (ENSKMAG00000021306)	plcg2 (ENSKMAG00000021218)	meak7 (ENSKMAG00000021185) #20	cotl1 (ENSKMAG00000021177) #21	klhl36 (ENSKMAG00000021160) #22	zgc:56622 (ENSKMAG00000021135)	tat (ENSKMAG00000021110)	pdf (ENSKMAG00000021105)	ENSKMAG00000021092	ENSKMAG00000021083	vps9d1 (ENSKMAG00000021026)
Turquoise killifish	MODERN SPECIES	1622	ELMO3 (ENSNFUG00015023697)	CU855816.1 (ENSNFUG00015023651)	ENSNFUG00015023591	MMP15 (ENSNFUG00015023571)	zpd (ENSNFUG00015023563)	NUP93 (ENSNFUG00015023542)	C5HXORF56 (ENSNFUG00015023539)	anapc13 (ENSNFUG00015023536)	OLA.28136 (ENSNFUG00015023535)	RSPRY1 (ENSNFUG00015023523)	ARL2BP (ENSNFUG00015023518)	pllp (ENSNFUG00015023513)	plcg2 (ENSNFUG00015023423)	KIAA1609 (ENSNFUG00015023418) #20	COTL1 (ENSNFUG00015023412) #21	KLHL36 (ENSNFUG00015023409) #22	zgc:56622 (ENSNFUG00015023408)	TAT (ENSNFUG00015022721)	PDF (ENSNFUG00015022663)	ENSNFUG00015022654	Nfu_g_1_008066 (ENSNFUG00015022651)	vps9d1 (ENSNFUG00015022640)	ENSNFUG00015022637	znf276 (ENSNFUG00015022629)	slc10a3 (ENSNFUG00015022622)	ENSNFUG00015022617	CDK10 (ENSNFUG00015022510)	VPS4A (ENSNFUG00015022370)	SNTB2 (ENSNFUG00015022359)	SPIRE2 (ENSNFUG00015022354)	chst6 (ENSNFUG00015022350)
Cyprinodontoidei	ANCESTRAL SPECIES	34	ENSGT00940000160637	ENSGT00940000162283.a	ENSGT00940000156939.f	ENSGT00940000167365	ENSGT00390000016353	ENSGT00390000002197	ENSGT00950000182967	ENSGT00390000008673	ENSGT01090000260267	ENSGT00940000157894	ENSGT00390000015052	ENSGT00940000156011	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a
Poeciliinae	ANCESTRAL SPECIES	3	ENSGT00940000160637	ENSGT00940000162283.a	ENSGT00940000156939.f	ENSGT00940000167365	ENSGT00390000016353	ENSGT00390000002197	ENSGT00950000182967	ENSGT00390000008673	ENSGT01090000260267	ENSGT00940000157894	ENSGT00390000015052	ENSGT00940000156011	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01100000264932	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a
Poecilia	ANCESTRAL SPECIES	74	ENSGT00940000160637	ENSGT00940000162283.a	ENSGT00940000156939.f	ENSGT00940000167365	ENSGT00390000016353	ENSGT00390000002197	ENSGT00950000182967	ENSGT00390000008673	ENSGT01090000260267	ENSGT00940000157894	ENSGT00390000015052	ENSGT00940000156011	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01100000264932	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a
NAME_6	ANCESTRAL SPECIES	224				ENSGT00940000156939.f	ENSGT00940000167365	ENSGT00390000016353	ENSGT00390000002197	ENSGT00390000008673	ENSGT01090000260267	ENSGT00940000157894	ENSGT00390000015052	ENSGT00940000156011	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01100000264932	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	2085								anapc13 (ENSPLAG00000007947)	ENSPLAG00000000769	rspry1 (ENSPLAG00000008008)	arl2bp (ENSPLAG00000008029)	pllp (ENSPLAG00000008066)	plcg2 (ENSPLAG00000008183)	meak7 (ENSPLAG00000008194) #20	cotl1 (ENSPLAG00000008210) #21	klhl36 (ENSPLAG00000008219) #22
Sailfin molly	MODERN SPECIES	3560																ENSPLAG00000000778 #22	zgc:56622 (ENSPLAG00000023424)
Amazon molly	MODERN SPECIES	780			MMP15 (ENSPFOG00000013161)	ENSPFOG00000022170	zpd (ENSPFOG00000013156)	nup93 (ENSPFOG00000013056)	steep1 (ENSPFOG00000020128)	anapc13 (ENSPFOG00000013043)	ENSPFOG00000023113	rspry1 (ENSPFOG00000012954)	arl2bp (ENSPFOG00000023992)	pllp (ENSPFOG00000012926)	plcg2 (ENSPFOG00000012280)	meak7 (ENSPFOG00000012235) #20	cotl1 (ENSPFOG00000012232) #21	klhl36 (ENSPFOG00000012125) #22	zgc:56622 (ENSPFOG00000012029)	tat (ENSPFOG00000011917)	ENSPFOG00000011912	pdf (ENSPFOG00000011894)	ENSPFOG00000023707	ENSPFOG00000011865	vps9d1 (ENSPFOG00000011813)	znf276 (ENSPFOG00000011742)	FANCA (ENSPFOG00000011484)	slc10a3 (ENSPFOG00000020124)	chmp1a (ENSPFOG00000011404)
Guppy	MODERN SPECIES	458	ENSPREG00000001132	ENSPREG00000001109	MMP15 (ENSPREG00000001088)	zpd (ENSPREG00000001074)	nup93 (ENSPREG00000001062)	steep1 (ENSPREG00000001043)	mt2 (ENSPREG00000001009)	anapc13 (ENSPREG00000000997)	ENSPREG00000000984	rspry1 (ENSPREG00000000926)	arl2bp (ENSPREG00000000872)	pllp (ENSPREG00000000861)	plcg2 (ENSPREG00000000819)	meak7 (ENSPREG00000000709) #20	cotl1 (ENSPREG00000000672) #21	klhl36 (ENSPREG00000000664) #22	zgc:56622 (ENSPREG00000000605)	tat (ENSPREG00000000553)	ENSPREG00000021075	pdf (ENSPREG00000021070)	ENSPREG00000021062	ENSPREG00000021047	vps9d1 (ENSPREG00000021032)	znf276 (ENSPREG00000021015)	ENSPREG00000020993	slc10a3 (ENSPREG00000020981)	chmp1a (ENSPREG00000020973)	ENSPREG00000020927	ENSPREG00000020917	ENSPREG00000020907	ENSPREG00000020901
Platyfish	MODERN SPECIES	11	ENSXMAG00000024751	MMP15 (ENSXMAG00000004942)	zpd (ENSXMAG00000026630)	nup93 (ENSXMAG00000013927)	steep1 (ENSXMAG00000019476)	ENSXMAG00000027273	mt2 (ENSXMAG00000020384)	anapc13 (ENSXMAG00000028231)	ENSXMAG00000022426	rspry1 (ENSXMAG00000013026)	arl2bp (ENSXMAG00000013018)	pllp (ENSXMAG00000021268)	plcg2 (ENSXMAG00000011966)	meak7 (ENSXMAG00000012014) #20	cotl1 (ENSXMAG00000024919) #21	klhl36 (ENSXMAG00000009101) #22	zgc:56622 (ENSXMAG00000028755)	tat (ENSXMAG00000009040)	pdf (ENSXMAG00000023904)	ENSXMAG00000027132	ENSXMAG00000010339	ENSXMAG00000026896	vps9d1 (ENSXMAG00000011727)	ENSXMAG00000025430	ENSXMAG00000024932	znf276 (ENSXMAG00000002903)	ENSXMAG00000027541	slc10a3 (ENSXMAG00000020295)	chmp1a (ENSXMAG00000025612)
NAME_4	ANCESTRAL SPECIES	59	ENSGT00940000160637	ENSGT00940000162283.a	ENSGT00940000156939.f	ENSGT00940000167365	ENSGT00390000016353	ENSGT00390000002197	ENSGT00950000182967	ENSGT00390000008673	ENSGT01090000260267	ENSGT00940000157894	ENSGT00390000015052	ENSGT00940000156011	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a
Mummichog	MODERN SPECIES	302	ENSFHEG00000009533	ENSFHEG00000009495	MMP15 (ENSFHEG00000009415)	ENSFHEG00000009399	nup93 (ENSFHEG00000009372)	steep1 (ENSFHEG00000009325)	mt2 (ENSFHEG00000009315)	anapc13 (ENSFHEG00000009306)	ENSFHEG00000009298	rspry1 (ENSFHEG00000009290)	ENSFHEG00000009255	pllp (ENSFHEG00000009234)	plcg2 (ENSFHEG00000009213)	meak7 (ENSFHEG00000009193) #20	ENSFHEG00000009187	klhl36 (ENSFHEG00000009178) #22	zgc:56622 (ENSFHEG00000000212)	tat (ENSFHEG00000009125)	pdf (ENSFHEG00000009052)	ENSFHEG00000009038	ENSFHEG00000009000	vps9d1 (ENSFHEG00000008942)	ENSFHEG00000008907	znf276 (ENSFHEG00000008886)	FANCA (ENSFHEG00000008827)	slc10a3 (ENSFHEG00000008808)	chmp1a (ENSFHEG00000008778)
Sheepshead minnow	MODERN SPECIES	369	cpsf3 (ENSCVAG00000022039)	ADAM17 (ENSCVAG00000022011)	taf1b (ENSCVAG00000021996)	klf11a (ENSCVAG00000021958)	RRM2 (ENSCVAG00000021949)	LGALS8 (ENSCVAG00000021927)	RRM2 (ENSCVAG00000021913)	ENSCVAG00000000876	tmem242 (ENSCVAG00000021882)	arid1b (ENSCVAG00000021865)	ENSCVAG00000021837	ENSCVAG00000021815	ENSCVAG00000021786	ENSCVAG00000021764	cotl1 (ENSCVAG00000021313) #21	klhl36 (ENSCVAG00000021301) #22	zgc:56622 (ENSCVAG00000021232)	tat (ENSCVAG00000021157)	pdf (ENSCVAG00000021118)	ENSCVAG00000021105	ENSCVAG00000021089
Oryzias	ANCESTRAL SPECIES	27	ENSGT00940000160637	ENSGT00940000162283.a	ENSGT00940000156939.f	ENSGT00940000167365	ENSGT00390000016353	ENSGT00390000002197	ENSGT00950000182967	ENSGT00390000008673	ENSGT00940000157517	ENSGT00940000156011	ENSGT00390000015052	ENSGT00940000157894	ENSGT00940000168208	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01090000260603	ENSGT00390000015057	ENSGT00940000178458	ENSGT00970000193565	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n
Oryzias_b	ANCESTRAL SPECIES		ENSGT00940000160637	ENSGT00940000162283.a	ENSGT00940000156939.f	ENSGT00940000167365	ENSGT00390000016353	ENSGT00390000002197	ENSGT00950000182967	ENSGT00390000008673	ENSGT00940000157517	ENSGT00940000156011	ENSGT00390000015052	ENSGT00940000157894	ENSGT00940000168208	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT00530000063956.b.a	ENSGT00390000018698	ENSGT01090000260603	ENSGT00390000015057	ENSGT00940000178458	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n	ENSGT00390000003058.b.a.b
Indian medaka	MODERN SPECIES	15	sostdc1a (ENSOMEG00000020482)	ENSOMEG00000020454	ENSOMEG00000020375	zpd (ENSOMEG00000020325)	nup93 (ENSOMEG00000020283)	steep1 (ENSOMEG00000020244)	mt2 (ENSOMEG00000020227)	anapc13 (ENSOMEG00000020209)	plcg2 (ENSOMEG00000020188)	pllp (ENSOMEG00000020125)	meak7 (ENSOMEG00000020111) #20	arl2bp (ENSOMEG00000020067)	rspry1 (ENSOMEG00000020054)	ENSOMEG00000020020	cotl1 (ENSOMEG00000020010) #21	klhl36 (ENSOMEG00000019933) #22	zgc:56622 (ENSOMEG00000019983)	tat (ENSOMEG00000019909)	ENSOMEG00000019882	pdf (ENSOMEG00000019868)	ENSOMEG00000019852	vps9d1 (ENSOMEG00000019828)	ENSOMEG00000019808	ENSOMEG00000019801	ENSOMEG00000019783	znf276 (ENSOMEG00000019767)	slc10a3 (ENSOMEG00000019744)	chmp1a (ENSOMEG00000019727)	cdk10 (ENSOMEG00000019707)	vps4a (ENSOMEG00000019646)	SNTB2 (ENSOMEG00000019639)
Javanese ricefish	MODERN SPECIES	20	e2f4 (ENSOJAG00000014167)	ELMO3 (ENSOJAG00000013491)	ENSOJAG00000013467	ENSOJAG00000012987	MMP15 (ENSOJAG00000012954)	zpd (ENSOJAG00000012945)	nup93 (ENSOJAG00000012381)	steep1 (ENSOJAG00000012361)	MT (ENSOJAG00000012345)	anapc13 (ENSOJAG00000012328)	plcg2 (ENSOJAG00000012019)	arl2bp (ENSOJAG00000011989)	rspry1 (ENSOJAG00000011860)	meak7 (ENSOJAG00000011849) #20	ENSOJAG00000011833 #21	klhl36 (ENSOJAG00000011822) #22	zgc:56622 (ENSOJAG00000011815)	tat (ENSOJAG00000011173)	ENSOJAG00000011119	pdf (ENSOJAG00000011073)	ENSOJAG00000011044	ENSOJAG00000011030	ENSOJAG00000011017	ENSOJAG00000011014	vps9d1 (ENSOJAG00000010916)	ENSOJAG00000010891	ENSOJAG00000010846	znf276 (ENSOJAG00000010836)	FANCA (ENSOJAG00000010807)	slc10a3 (ENSOJAG00000010796)	chmp1a (ENSOJAG00000010788)
Oryzias_a	ANCESTRAL SPECIES	1	ENSGT00940000160637	ENSGT00940000162283.a	ENSGT00940000156939.f	ENSGT00940000167365	ENSGT00390000016353	ENSGT00390000002197	ENSGT00950000182967	ENSGT00390000008673	ENSGT00940000157517	ENSGT00940000156011	ENSGT00390000015052	ENSGT00940000157894	ENSGT00940000168208	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01090000260603	ENSGT00390000015057	ENSGT00970000193565	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n	ENSGT00390000003058.b.a.b
Chinese medaka	MODERN SPECIES	412										pllp (ENSOSIG00000000172)	arl2bp (ENSOSIG00000000160)	rspry1 (ENSOSIG00000000129)	ENSOSIG00000000084	meak7 (ENSOSIG00000021251) #20	cotl1 (ENSOSIG00000021248) #21	klhl36 (ENSOSIG00000021240) #22	zgc:56622 (ENSOSIG00000021238)	tat (ENSOSIG00000021189)	pdf (ENSOSIG00000021157)	ENSOSIG00000021156	ENSOSIG00000021154	vps9d1 (ENSOSIG00000021152)	ENSOSIG00000021144	znf276 (ENSOSIG00000021140)	ENSOSIG00000021137	slc10a3 (ENSOSIG00000021134)	chmp1a (ENSOSIG00000021131)	cdk10 (ENSOSIG00000021068)	ENSOSIG00000021063	ENSOSIG00000021062	SNTB2 (ENSOSIG00000021050)
Japanese Medaka HdrR	DUPLICATION
Japanese Medaka HdrR	MODERN SPECIES	13	igsf3 (ENSORLG00000017870)	rpe (ENSORLG00000017873)	ackr3a (ENSORLG00000017874)	nqo1 (ENSORLG00000017876)	ENSORLG00000030361	ENSORLG00000007464	vangl1 (ENSORLG00000017880)	casq2 (ENSORLG00000017885)	SLC5A3 (ENSORLG00000017889)	DOP1B (ENSORLG00000017902)	ENSORLG00000024053	ENSORLG00000017910	ENSORLG00000017912	ENSORLG00000017907	chaf1b (ENSORLG00000017915)	ENSORLG00000028455 #22	bcl9 (ENSORLG00000017920)	acp6 (ENSORLG00000017924)	gja5a (ENSORLG00000017925)	ENSORLG00000022370	gja8a (ENSORLG00000017928)	ENSORLG00000027779	ENSORLG00000027542	ENSORLG00000022041	ENSORLG00000027174	ENSORLG00000024585	ENSORLG00000023380	ENSORLG00000023439	ENSORLG00000024181	ENSORLG00000023858	ENSORLG00000026854
Japanese Medaka HdrR	MODERN SPECIES	20	ENSORLG00000015638	ENSORLG00000028564	ENSORLG00000015628	zpd (ENSORLG00000015608)	nup93 (ENSORLG00000015598)	steep1 (ENSORLG00000015587)	mt2 (ENSORLG00000015580)	anapc13 (ENSORLG00000015577)	plcg2 (ENSORLG00000015570)	pllp (ENSORLG00000026210)	arl2bp (ENSORLG00000015513)	rspry1 (ENSORLG00000015495)	ENSORLG00000015479	meak7 (ENSORLG00000015474) #20	cotl1 (ENSORLG00000015454) #21	klhl36 (ENSORLG00000015442) #22	zgc:56622 (ENSORLG00000015416)	tat (ENSORLG00000015360)	pdf (ENSORLG00000015332)	ENSORLG00000015322	ENSORLG00000023856	vps9d1 (ENSORLG00000015319)	ENSORLG00000023185	ENSORLG00000015297	ENSORLG00000029097	ENSORLG00000015300	ENSORLG00000026882	znf276 (ENSORLG00000015289)	slc10a3 (ENSORLG00000015265)	chmp1a (ENSORLG00000015261)	cdk10 (ENSORLG00000029339)
Percomorphaceae_C	ANCESTRAL SPECIES	5	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00970000193565	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319
Percomorphaceae_D	ANCESTRAL SPECIES	5	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n
Anabantaria	ANCESTRAL SPECIES	5	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00390000004877	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00970000193565	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000178939	ENSGT00940000158102	ENSGT00940000157319
Anabantoidei	ANCESTRAL SPECIES	5	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00390000004877	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00970000193565	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000178939	ENSGT00940000158102	ENSGT00940000157319
Climbing perch	MODERN SPECIES	19	HAS3 (ENSATEG00000030007)	chtf8 (ENSATEG00000005576)	UTP4 (ENSATEG00000005607)	ENSATEG00000005620	zc3h18 (ENSATEG00000005626)	ENSATEG00000005634	zfpm1 (ENSATEG00000005697)	ces3 (ENSATEG00000005709)	kiaa0513 (ENSATEG00000005723) #26	ENSATEG00000005732 #37	ENSATEG00000005752	ENSATEG00000005791	ENSATEG00000005849	plcg2 (ENSATEG00000005977)	ENSATEG00000006138	klhl36 (ENSATEG00000006170) #22	zgc:56622 (ENSATEG00000006212)	tat (ENSATEG00000006269)	ENSATEG00000006325	pdf (ENSATEG00000006343)	ENSATEG00000028101	ENSATEG00000006388	vps9d1 (ENSATEG00000006428)	ENSATEG00000028769	znf276 (ENSATEG00000006469)	ENSATEG00000006502	chmp1a (ENSATEG00000006509)	ENSATEG00000028426	cdk10 (ENSATEG00000006629)	vps4a (ENSATEG00000006636)	ENSATEG00000006683
Siamese fighting fish	MODERN SPECIES	17	ENSBSLG00000023580	chtf8 (ENSBSLG00000023582)	utp4 (ENSBSLG00000023600)	ENSBSLG00000023646	zc3h18 (ENSBSLG00000023654)	trhr2 (ENSBSLG00000023680)	zfpm1 (ENSBSLG00000023690)	ces3 (ENSBSLG00000023704)	kiaa0513 (ENSBSLG00000023723) #26	foxl1 (ENSBSLG00000023744) #37	ENSBSLG00000023746	GAN (ENSBSLG00000023750)	CMIP (ENSBSLG00000023763)	meak7 (ENSBSLG00000023846) #20	cotl1 (ENSBSLG00000023865) #21	klhl36 (ENSBSLG00000023879) #22	zgc:56622 (ENSBSLG00000023898)	tat (ENSBSLG00000000704)	ENSBSLG00000000914	pdf (ENSBSLG00000000917)	ENSBSLG00000000922	ENSBSLG00000000924	vps9d1 (ENSBSLG00000000926)	znf276 (ENSBSLG00000000937)	FANCA (ENSBSLG00000000941)	slc10a3 (ENSBSLG00000000950)	chmp1a (ENSBSLG00000000952)	ENSBSLG00000000956	cdk10 (ENSBSLG00000000962)	vps4a (ENSBSLG00000000983)	SNTB2 (ENSBSLG00000001205)
Zig-zag eel	MODERN SPECIES	20	chtf8 (ENSMAMG00000024260)	UTP4 (ENSMAMG00000011957)	ENSMAMG00000011967	zc3h18 (ENSMAMG00000011979)	ENSMAMG00000012010	zfpm1 (ENSMAMG00000012173)	ces3 (ENSMAMG00000012187)	kiaa0513 (ENSMAMG00000012203) #26	ENSMAMG00000012214 #37	ENSMAMG00000012231	ENSMAMG00000012242	ENSMAMG00000012289	plcg2 (ENSMAMG00000012362)	meak7 (ENSMAMG00000012494) #20	cotl1 (ENSMAMG00000012505) #21	klhl36 (ENSMAMG00000012516) #22	zgc:56622 (ENSMAMG00000012553)	tat (ENSMAMG00000012593)	ENSMAMG00000012621	pdf (ENSMAMG00000012648)	ENSMAMG00000025342	ENSMAMG00000012663	vps9d1 (ENSMAMG00000012691)	ENSMAMG00000012746	ENSMAMG00000012762	ENSMAMG00000012768	znf276 (ENSMAMG00000012780)	FANCA (ENSMAMG00000012802)	slc10a3 (ENSMAMG00000012840)	chmp1a (ENSMAMG00000012847)	cdk10 (ENSMAMG00000012870)
Carangaria	ANCESTRAL SPECIES	6	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n
Pleuronectoidei	ANCESTRAL SPECIES		ENSGT00390000010337.B.a.a	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n	ENSGT00390000003058.b.a.b
Turbot	MODERN SPECIES	1	chtf8 (ENSSMAG00000018002)	UTP4 (ENSSMAG00000018030)	ENSSMAG00000025463	zc3h18 (ENSSMAG00000018052)	ENSSMAG00000018100	zfpm1 (ENSSMAG00000018113)	ces3 (ENSSMAG00000000226)	kiaa0513 (ENSSMAG00000000230) #26	ENSSMAG00000000254 #37	ENSSMAG00000000259	ENSSMAG00000000265	ENSSMAG00000000282	plcg2 (ENSSMAG00000000369)	meak7 (ENSSMAG00000000386) #20	cotl1 (ENSSMAG00000027950) #21	klhl36 (ENSSMAG00000000396) #22	zgc:56622 (ENSSMAG00000000410)	ENSSMAG00000037292	ENSSMAG00000033560	pdf (ENSSMAG00000032152)	ENSSMAG00000000425	ENSSMAG00000000426	vps9d1 (ENSSMAG00000000434)	znf276 (ENSSMAG00000000455)	FANCA (ENSSMAG00000000461)	slc10a3 (ENSSMAG00000000483)	chmp1a (ENSSMAG00000000486)	cdk10 (ENSSMAG00000000490)	vps4a (ENSSMAG00000000504)	ENSSMAG00000000510	spire2 (ENSSMAG00000000516)
Tongue sole	MODERN SPECIES	16	ldhd (ENSCSEG00000000485)	cetp (ENSCSEG00000000479)	chka (ENSCSEG00000000475)	si:dkey-12e7.1 (ENSCSEG00000000468)	utp4 (ENSCSEG00000000456)	chtf8 (ENSCSEG00000000453)	has3 (ENSCSEG00000000417)	TANGO6 (ENSCSEG00000000404)	ENSCSEG00000000396	zc3h18 (ENSCSEG00000000372)	trhr2 (ENSCSEG00000000364)	zfpm1 (ENSCSEG00000000359)	plcg2 (ENSCSEG00000000340)	meak7 (ENSCSEG00000000335) #20	cotl1 (ENSCSEG00000000329) #21	klhl36 (ENSCSEG00000000325) #22	zgc:56622 (ENSCSEG00000000316)	tat (ENSCSEG00000000303)	ENSCSEG00000000298	pdf (ENSCSEG00000000294)	kiaa0513 (ENSCSEG00000000289) #26	ENSCSEG00000000282	GAN (ENSCSEG00000000278)	ENSCSEG00000000274	FOXL1 (ENSCSEG00000000271) #37	ENSCSEG00000021812	ENSCSEG00000021811	vps9d1 (ENSCSEG00000021810)	ENSCSEG00000021809	znf276 (ENSCSEG00000021808)	ENSCSEG00000021807
Carangaria_A	ANCESTRAL SPECIES		ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00940000165840	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n
Seriola	ANCESTRAL SPECIES	5	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00940000165840	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n
Greater amberjack	MODERN SPECIES	86	utp4 (ENSSDUG00000002976)	ENSSDUG00000003024	zc3h18 (ENSSDUG00000003040)	trhr2 (ENSSDUG00000003096)	zfpm1 (ENSSDUG00000003117)	ces3 (ENSSDUG00000003148)	kiaa0513 (ENSSDUG00000003366) #26	foxl1 (ENSSDUG00000003405) #37	ENSSDUG00000003414 #37	ENSSDUG00000003429	GAN (ENSSDUG00000003438)	ENSSDUG00000003487	plcg2 (ENSSDUG00000003625)	meak7 (ENSSDUG00000004482) #20	cotl1 (ENSSDUG00000004492) #21	klhl36 (ENSSDUG00000004504) #22	zgc:56622 (ENSSDUG00000004548)	tat (ENSSDUG00000004645)	ENSSDUG00000004674	pdf (ENSSDUG00000004692)	ENSSDUG00000004701
Yellowtail amberjack	MODERN SPECIES	3283	chtf8 (ENSSLDG00000005276)	utp4 (ENSSLDG00000005258)	ENSSLDG00000005237	zc3h18 (ENSSLDG00000005204)	trhr2 (ENSSLDG00000005157)	zfpm1 (ENSSLDG00000005129)	ces3 (ENSSLDG00000005094)	kiaa0513 (ENSSLDG00000005035) #26	foxl1 (ENSSLDG00000005001) #37	ENSSLDG00000004984	GAN (ENSSLDG00000004896)	ENSSLDG00000004812	plcg2 (ENSSLDG00000004667)	meak7 (ENSSLDG00000004631) #20	cotl1 (ENSSLDG00000004596) #21	klhl36 (ENSSLDG00000004548) #22	zgc:56622 (ENSSLDG00000004501)	tat (ENSSLDG00000004421)	ENSSLDG00000004394	pdf (ENSSLDG00000004374)	ENSSLDG00000004357	ENSSLDG00000004326	vps9d1 (ENSSLDG00000004304)	znf276 (ENSSLDG00000004288)	slc10a3 (ENSSLDG00000004272)	chmp1a (ENSSLDG00000004249)	ENSSLDG00000004241	cdk10 (ENSSLDG00000004191)	vps4a (ENSSLDG00000004140)	SNTB2 (ENSSLDG00000004055)	ENSSLDG00000004038
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	215	ENSLCAG00010005989	klhl6 (ENSLCAG00010005985)	igsf3l (ENSLCAG00010005983)	igsf3 (ENSLCAG00010005973)	rpe (ENSLCAG00010005964)	ackr3a (ENSLCAG00010005960)	ENSLCAG00010005955	ENSLCAG00010005952	vangl1 (ENSLCAG00010005947)	casq2 (ENSLCAG00010005727)	KCNE2 (ENSLCAG00010005691)	SLC5A3 (ENSLCAG00010005688)	DOP1B (ENSLCAG00010005667)	morc3a (ENSLCAG00010005656)	chaf1b (ENSLCAG00010005642)	ENSLCAG00010005641 #22	bcl9 (ENSLCAG00010005639)	acp6 (ENSLCAG00010005637)	gja5a (ENSLCAG00010005634)	gja8a (ENSLCAG00010005633)
Barramundi perch	MODERN SPECIES	217	TANGO6 (ENSLCAG00010020843)	ENSLCAG00010020837	zc3h18 (ENSLCAG00010020827)	trhr2 (ENSLCAG00010020822)	zfpm1 (ENSLCAG00010020819)	ces3 (ENSLCAG00010020780)	kiaa0513 (ENSLCAG00010020730) #26	ENSLCAG00010020713	ENSLCAG00010020709	GAN (ENSLCAG00010020686)	CMIP (ENSLCAG00010020528)	plcg2 (ENSLCAG00010020245)	meak7 (ENSLCAG00010020206) #20	ENSLCAG00010020203	cotl1 (ENSLCAG00010020202) #21	klhl36 (ENSLCAG00010020196) #22	zgc:56622 (ENSLCAG00010020188)	tat (ENSLCAG00010020085)	ENSLCAG00010020054	pdf (ENSLCAG00010020051)	ENSLCAG00010020045	ENSLCAG00010020040	vps9d1 (ENSLCAG00010020012)
Eupercaria	ANCESTRAL SPECIES	6	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00970000193565	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319
Tetraodontidae	ANCESTRAL SPECIES	31	ENSGT00690000103139	ENSGT00940000156939.f	ENSGT00940000167365	ENSGT00390000016353	ENSGT00390000002197	ENSGT00950000182967.f.a	ENSGT00390000008673	ENSGT00940000168208	ENSGT00940000157894	ENSGT00940000154540.a	ENSGT00390000015052	ENSGT00940000156011	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00970000193565	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	ATP6V1B1 (ENSTNIG00000002000)	ENSTNIG00000002001	ENSTNIG00000001328	ENSTNIG00000002003	ACTN1 (ENSTNIG00000002006)	ENSTNIG00000000902	UPP1 (ENSTNIG00000001379)	C11orf98 (ENSTNIG00000002007)	atg14 (ENSTNIG00000002008)	psmc6 (ENSTNIG00000002009)	ENSTNIG00000002010	ENSTNIG00000002011	ENSTNIG00000002012	GID4 (ENSTNIG00000002013)	ENSTNIG00000001371	klhl36 (ENSTNIG00000002014) #22	TFAP4 (ENSTNIG00000002015)	gna13a (ENSTNIG00000002016)	ENSTNIG00000002017	ENSTNIG00000002018	ENSTNIG00000002022	wdyhv1 (ENSTNIG00000002025)	ENSTNIG00000002028	ENSTNIG00000001531	ENSTNIG00000002030	ENSTNIG00000002031	ENSTNIG00000001270	ENSTNIG00000002032	ENSTNIG00000002034	ENSTNIG00000002035	spout1 (ENSTNIG00000002036)
Tetraodon	MODERN SPECIES	4	ENSTNIG00000008817	ENSTNIG00000008818	MMP15 (ENSTNIG00000008819)	zpd (ENSTNIG00000008820)	nup93 (ENSTNIG00000008821)	steep1 (ENSTNIG00000008822)	mt2 (ENSTNIG00000008823)	mt2 (ENSTNIG00000008824)	rspry1 (ENSTNIG00000008825)	rabgef1 (ENSTNIG00000008826)	arl2bp (ENSTNIG00000008827)	pllp (ENSTNIG00000008828)	plcg2 (ENSTNIG00000008829)	meak7 (ENSTNIG00000008830) #20	cotl1 (ENSTNIG00000008831) #21	klhl36 (ENSTNIG00000008832) #22	zgc:56622 (ENSTNIG00000008833)	tat (ENSTNIG00000008834)	tat (ENSTNIG00000008855)	pdf (ENSTNIG00000008835)	ENSTNIG00000000354	ENSTNIG00000008836	vps9d1 (ENSTNIG00000008837)	ENSTNIG00000008838	znf276 (ENSTNIG00000008839)	FANCA (ENSTNIG00000008840)	slc10a3 (ENSTNIG00000001402)	chmp1a (ENSTNIG00000008841)	cdk10 (ENSTNIG00000008842)	vps4a (ENSTNIG00000008843)	SNTB2 (ENSTNIG00000008844)
Fugu	MODERN SPECIES	21	MMP15 (ENSTRUG00000031340)	zpd (ENSTRUG00000009190)	nup93 (ENSTRUG00000008930)	steep1 (ENSTRUG00000031082)	mt2 (ENSTRUG00000030569)	mt2 (ENSTRUG00000020060)	anapc13 (ENSTRUG00000030261)	ENSTRUG00000020972	rspry1 (ENSTRUG00000008607)	rabgef1 (ENSTRUG00000008465)	arl2bp (ENSTRUG00000020068)	pllp (ENSTRUG00000008233)	plcg2 (ENSTRUG00000007265)	meak7 (ENSTRUG00000007124) #20	cotl1 (ENSTRUG00000025995) #21	klhl36 (ENSTRUG00000006513) #22	zgc:56622 (ENSTRUG00000005766)	tat (ENSTRUG00000005637)	ENSTRUG00000022890	pdf (ENSTRUG00000021897)	ENSTRUG00000023901	ENSTRUG00000025691	vps9d1 (ENSTRUG00000005374)	ENSTRUG00000005360	znf276 (ENSTRUG00000005087)	FANCA (ENSTRUG00000027265)	slc10a3 (ENSTRUG00000004776)	ENSTRUG00000023026	cdk10 (ENSTRUG00000004172)	vps4a (ENSTRUG00000003329)	SNTB2 (ENSTRUG00000002707)
Eupecaria_A	ANCESTRAL SPECIES	7	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	6	ENSLBEG00000007123	ENSLBEG00000007101	trhr2 (ENSLBEG00000007079)	zc3h18 (ENSLBEG00000007020)	ENSLBEG00000006992	utp4 (ENSLBEG00000006956)	chtf8 (ENSLBEG00000006936)	has3 (ENSLBEG00000006802)	ENSLBEG00000006704	ENSLBEG00000006665	ENSLBEG00000006598	ENSLBEG00000006558	plcg2 (ENSLBEG00000006397)	meak7 (ENSLBEG00000006338) #20	cotl1 (ENSLBEG00000006313) #21	klhl36 (ENSLBEG00000006279) #22	zgc:56622 (ENSLBEG00000006242)	tat (ENSLBEG00000006171)	ENSLBEG00000006146	pdf (ENSLBEG00000006136)	ENSLBEG00000006088	vps9d1 (ENSLBEG00000006035)	ENSLBEG00000006001	znf276 (ENSLBEG00000005968)	FANCA (ENSLBEG00000005796)	slc10a3 (ENSLBEG00000005743)	chmp1a (ENSLBEG00000005711)	ENSLBEG00000005696	cdk10 (ENSLBEG00000005652)	vps4a (ENSLBEG00000005620)	SNTB2 (ENSLBEG00000005574)
Ballan wrasse	MODERN SPECIES	3898																klhl36 (ENSLBEG00000020083) #22
Eupecaria_B	ANCESTRAL SPECIES	7	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000174092	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319
Eupecaria_C	ANCESTRAL SPECIES	29	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187.h	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000174092	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	36	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187.h	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n	ENSGT00390000003058.b.a.b
Large yellow croaker	MODERN SPECIES	483	CLN6 (ENSLCRG00005000959)	CALML4 (ENSLCRG00005000963)	ENSLCRG00005000966	ENSLCRG00005000970	ENSLCRG00005000972	ENSLCRG00005000977	ENSLCRG00005000982	spg11 (ENSLCRG00005000991)	ENSLCRG00005001009	ENSLCRG00005001013	ENSLCRG00005001023	ENSLCRG00005001027	ENSLCRG00005001034	znf277 (ENSLCRG00005001040)	ENSLCRG00005001048	klhl36 (ENSLCRG00005001053) #22	zgc:56622 (ENSLCRG00005001058)	necab2 (ENSLCRG00005001075) #10	SLC38A8 (ENSLCRG00005001080) #11	mbtps1 (ENSLCRG00005001098) #12	pskh1 (ENSLCRG00005001321)	NRN1L (ENSLCRG00005001331)	edc4 (ENSLCRG00005001382)	nutf2 (ENSLCRG00005005634)	ENSLCRG00005005636	ranbp10 (ENSLCRG00005005641)	det1 (ENSLCRG00005005689)	map1lc3b (ENSLCRG00005005719)	ENSLCRG00005005725	timm29 (ENSLCRG00005005730)	yipf2 (ENSLCRG00005005732)
European seabass	MODERN SPECIES	19	UTP4 (ENSDLAG00005019458)	ENSDLAG00005019452	zc3h18 (ENSDLAG00005019413)	ENSDLAG00005019403	ENSDLAG00005019400	ENSDLAG00005005303	ENSDLAG00005034834	zfpm1 (ENSDLAG00005019395)	ENSDLAG00005019369	ENSDLAG00005019228	ENSDLAG00005034219 #37	ENSDLAG00005019352	ENSDLAG00005018676	plcg2 (ENSDLAG00005018456)	cotl1 (ENSDLAG00005018434) #21	klhl36 (ENSDLAG00005018420) #22	zgc:56622 (ENSDLAG00005033989)	tat (ENSDLAG00005018405)	ENSDLAG00005030188	pdf (ENSDLAG00005026841)	ENSDLAG00005034328	ENSDLAG00005018363	ZNF276 (ENSDLAG00005018243)	vps9d1 (ENSDLAG00005018283)	ENSDLAG00005018264	ENSDLAG00005032860	ENSDLAG00005011527	ENSDLAG00005018253	slc10a3 (ENSDLAG00005034585)	ENSDLAG00005018171	ENSDLAG00005018138
Gilthead seabream	MODERN SPECIES	22	cstpp1 (ENSSAUG00010019534)	ENSSAUG00010019533	ckap5 (ENSSAUG00010009295)	ENSSAUG00010009116	dnaaf4 (ENSSAUG00010009109)	anpepb.1 (ENSSAUG00010008624)	ENSSAUG00010008600	ENSSAUG00010008598	ENSSAUG00010008235	ANPEP (ENSSAUG00010007960)	ENSSAUG00010007957	plcg2 (ENSSAUG00010007587)	meak7 (ENSSAUG00010007555) #20	ENSSAUG00010007553	cotl1 (ENSSAUG00010007552) #21	klhl36 (ENSSAUG00010007550) #22	zgc:56622 (ENSSAUG00010007510)	tat (ENSSAUG00010004351)	ENSSAUG00010004150	pdf (ENSSAUG00010004141)	ENSSAUG00010004109	ENSSAUG00010004085	vps9d1 (ENSSAUG00010023702)	ENSSAUG00010023695	znf276 (ENSSAUG00010023692)	ENSSAUG00010023690	slc10a3 (ENSSAUG00010023686)	chmp1a (ENSSAUG00010023682)	ENSSAUG00010023680	cdk10 (ENSSAUG00010023166)	vps4a (ENSSAUG00010022473)
Perciformes	ANCESTRAL SPECIES	28	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000174092	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319
Cottioidei	ANCESTRAL SPECIES	32	ENSGT00940000155645.i.a	ENSGT00950000183211.a.a.b	ENSGT00980000202268	ENSGT00390000009663	ENSGT00390000018141	ENSGT00950000183008.a.b	ENSGT00940000166017	ENSGT00940000157816.a.a	ENSGT00940000156574.C	ENSGT00940000153377.B	ENSGT01100000263627	ENSGT00940000159189	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT00960000187029	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n	ENSGT00390000003058.b.a.b
Lumpfish	MODERN SPECIES	21	NTRK3 (ENSCLMG00005012762)	pard6a (ENSCLMG00005012761)	ENSCLMG00005012760	gal (ENSCLMG00005012758)	cfdp1 (ENSCLMG00005012757)	bcar1 (ENSCLMG00005012755)	zgc:158868 (ENSCLMG00005012753)	CCND1 (ENSCLMG00005012750)	lrp5 (ENSCLMG00005003603)	ENSCLMG00005003495	ENSCLMG00005003494	tmem170a (ENSCLMG00005003492)	plcg2 (ENSCLMG00005003172)	meak7 (ENSCLMG00005003140) #20	cotl1 (ENSCLMG00005003137) #21	klhl36 (ENSCLMG00005003133) #22	zgc:56622 (ENSCLMG00005003127)	tat (ENSCLMG00005003124)	pdf (ENSCLMG00005003116)	ENSCLMG00005003113	ENSCLMG00005003110	vps9d1 (ENSCLMG00005003002)	znf276 (ENSCLMG00005002953)	ENSCLMG00005002922	slc10a3 (ENSCLMG00005002886)	chmp1a (ENSCLMG00005019776)	cdk10 (ENSCLMG00005019342)	vps4a (ENSCLMG00005018125)	SNTB2 (ENSCLMG00005018122)	spire2 (ENSCLMG00005018121)	tmem231 (ENSCLMG00005018118)
Stickleback	MODERN SPECIES	177												tmem170a (ENSGACG00000000494)	plcg2 (ENSGACG00000000483)	meak7 (ENSGACG00000000482) #20	cotl1 (ENSGACG00000000480) #21	ENSGACG00000000477 #22	zgc:56622 (ENSGACG00000000473)	tat (ENSGACG00000000464)	ENSGACG00000000463	pdf (ENSGACG00000000460)	ENSGACG00000000459	ENSGACG00000000457	vps9d1 (ENSGACG00000000452)	ENSGACG00000000447	ENSGACG00000000446	ENSGACG00000000444	ENSGACG00000000442	ENSGACG00000000440	ENSGACG00000000438	ENSGACG00000000435	ENSGACG00000000433
Perciformes_a	ANCESTRAL SPECIES	30	ENSGT00400000025006	ENSGT00940000153533.b	ENSGT00940000170707	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000175365	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248721	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000234925	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT01060000249356	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a.n
Channel bull blenny	MODERN SPECIES	20	utp4 (ENSCGOG00000002730)	ENSCGOG00000003108	zc3h18 (ENSCGOG00000003113)	trhr2 (ENSCGOG00000003126)	zfpm1 (ENSCGOG00000003130)	ces3 (ENSCGOG00000003135)	kiaa0513 (ENSCGOG00000003162) #26	foxl1 (ENSCGOG00000003172) #37	ENSCGOG00000003175	GAN (ENSCGOG00000003188)	CMIP (ENSCGOG00000003368)	plcg2 (ENSCGOG00000003710)	meak7 (ENSCGOG00000004651) #20	ENSCGOG00000004654	cotl1 (ENSCGOG00000004657) #21	klhl36 (ENSCGOG00000004662) #22	zgc:56622 (ENSCGOG00000004666)	tat (ENSCGOG00000004669)	pdf (ENSCGOG00000004673)	ENSCGOG00000004674	ENSCGOG00000004675	vps9d1 (ENSCGOG00000004688)	znf276 (ENSCGOG00000004701)	ENSCGOG00000004703	slc10a3 (ENSCGOG00000004714)	chmp1a (ENSCGOG00000004716)	ENSCGOG00000004719	cdk10 (ENSCGOG00000004727)	vps4a (ENSCGOG00000005150)	SNTB2 (ENSCGOG00000005355)	spire2 (ENSCGOG00000005415)
Pike perch	MODERN SPECIES	67					trhr2 (ENSSLUG00000017968)	zfpm1 (ENSSLUG00000017956)	ces3 (ENSSLUG00000017928)	kiaa0513 (ENSSLUG00000017917) #26	foxl1 (ENSSLUG00000017913) #37	ENSSLUG00000017902	GAN (ENSSLUG00000017869)	CMIP (ENSSLUG00000017839)	plcg2 (ENSSLUG00000017308)	meak7 (ENSSLUG00000017263) #20	cotl1 (ENSSLUG00000017257) #21	klhl36 (ENSSLUG00000017253) #22	zgc:56622 (ENSSLUG00000017215)	tat (ENSSLUG00000016843)	ENSSLUG00000016817	ENSSLUG00000016812	pdf (ENSSLUG00000016810)	ENSSLUG00000016806	ENSSLUG00000016801	vps9d1 (ENSSLUG00000016782)	ENSSLUG00000016772	ENSSLUG00000016771	znf276 (ENSSLUG00000016765)	slc10a3 (ENSSLUG00000016762)	chmp1a (ENSSLUG00000016760)	ENSSLUG00000016755	cdk10 (ENSSLUG00000016072)
Protacanthopterygii	ANCESTRAL SPECIES	25	ENSGT00400000025006	ENSGT00390000010337.B.a.a	ENSGT00390000010938	ENSGT00940000166375	ENSGT00730000111190	ENSGT01100000263484.B.a	ENSGT00530000063823.b.a	ENSGT00940000166187	ENSGT00390000009535 #26	ENSGT00940000162251 #37	ENSGT00940000155273	ENSGT00390000018220	ENSGT00940000157517	ENSGT00940000158087 #20	ENSGT00390000012498 #21	ENSGT00940000157543 #22	ENSGT00940000166411	ENSGT00940000156704	ENSGT01060000248783	ENSGT00390000018698	ENSGT00530000063956.b.a	ENSGT01030000235114	ENSGT00390000015057	ENSGT00940000158841	ENSGT00390000007852	ENSGT00950000182808.b.b	ENSGT00950000182832.D.a	ENSGT00940000158102	ENSGT00940000157319	ENSGT00950000182863.A.a.a	ENSGT00390000003058.b.a.b
Northern pike	MODERN SPECIES	18	chtf8 (ENSELUG00000014574)	has3 (ENSELUG00000014555)	TANGO6 (ENSELUG00000014524)	ENSELUG00000014447	zc3h18 (ENSELUG00000014426)	trhr2 (ENSELUG00000014316)	zfpm1 (ENSELUG00000013952)	ENSELUG00000013905	ces3 (ENSELUG00000013883)	kiaa0513 (ENSELUG00000013732) #26	foxl1 (ENSELUG00000001172) #37	CMIP (ENSELUG00000013650)	plcg2 (ENSELUG00000013508)	meak7 (ENSELUG00000013361) #20	cotl1 (ENSELUG00000013308) #21	klhl36 (ENSELUG00000013177) #22	zgc:56622 (ENSELUG00000013288)	tat (ENSELUG00000013141)	pdf (ENSELUG00000013083)	ENSELUG00000013104	pecr (ENSELUG00000013056)	vps9d1 (ENSELUG00000012987)	znf276 (ENSELUG00000012961)	ENSELUG00000012887	slc10a3 (ENSELUG00000012785)	chmp1a (ENSELUG00000000467)	cdk10 (ENSELUG00000012731)	vps4a (ENSELUG00000012680)	SNTB2 (ENSELUG00000012650)	spire2 (ENSELUG00000012595)	chst6 (ENSELUG00000012533)
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	18	ENSGT00940000153533.b.d	ENSGT00400000025006.c	ENSGT00390000010337.B.a.a.k	ENSGT00390000010938	ENSGT00940000166375	ENSGT00730000111190.e	ENSGT01100000263484.B.a.b	ENSGT00530000063823.b.a.h	ENSGT00940000166187	ENSGT00940000162251.i #37	ENSGT00940000155273.i.a	ENSGT00390000018220.f	ENSGT00940000157517.m.b	ENSGT00940000158087 #20	ENSGT00390000012498.d #21	ENSGT00940000157543.fb.a #22	ENSGT00940000156704.c	ENSGT00390000018698.c	ENSGT01030000235114.d	ENSGT00390000015057.a	ENSGT00390000007852	ENSGT00950000182808.b.b.d	ENSGT00950000182832.D.a.l	ENSGT00940000157319.v	ENSGT00950000182863.A.a.a.p	ENSGT00390000003058.b.a.b.j.a	ENSGT00940000157942	ENSGT00940000154635.b.c	ENSGT00950000183081.b.j	ENSGT00950000183100.A.a	ENSGT00390000009328.m
Salmoninae_a	ANCESTRAL SPECIES	13	ENSGT00940000153533.b.d	ENSGT00400000025006.c	ENSGT00390000010337.B.a.a.k	ENSGT00390000010938	ENSGT00940000166375.g.b	ENSGT00730000111190.e	ENSGT01100000263484.B.a.b	ENSGT00530000063823.b.a.h	ENSGT00940000166187	ENSGT00940000162251.i #37	ENSGT00940000155273.i.a	ENSGT00390000018220.f	ENSGT00940000157517.m.b	ENSGT00940000158087 #20	ENSGT00390000012498.d #21	ENSGT00940000157543.fb.a #22	ENSGT00940000156704.c	ENSGT00390000018698.c	ENSGT01030000235114.d	ENSGT00390000015057.a	ENSGT00390000007852	ENSGT00950000182808.b.b.d	ENSGT00950000182832.D.a.l	ENSGT00940000157319.v	ENSGT00950000182863.A.a.a.p	ENSGT00390000003058.b.a.b.j.a	ENSGT00940000157942	ENSGT00940000154635.b.c	ENSGT00950000183081.b.j	ENSGT00950000183100.A.a	ENSGT00390000009328.m
Salmo	ANCESTRAL SPECIES	36	ENSGT00940000153533.b.d	ENSGT00400000025006.c	ENSGT00390000010337.B.a.a.k	ENSGT00390000010938	ENSGT00940000166375.g.b	ENSGT00730000111190.e	ENSGT01100000263484.B.a.b	ENSGT00530000063823.b.a.h	ENSGT00940000166187	ENSGT00940000162251.i #37	ENSGT00940000155273.i.a	ENSGT00390000018220.f	ENSGT00940000157517.m.b	ENSGT00940000158087 #20	ENSGT00390000012498.d #21	ENSGT00940000157543.fb.a #22	ENSGT00940000156704.c	ENSGT00390000018698.c	ENSGT01030000235114.d	ENSGT00390000015057.a	ENSGT00940000158841.k	ENSGT00390000007852	ENSGT00950000182808.b.b.d	ENSGT00950000182832.D.a.l	ENSGT00940000157319.v	ENSGT00950000182863.A.a.a.p	ENSGT00390000003058.b.a.b.j.a	ENSGT00940000157942	ENSGT00940000154635.b.c	ENSGT00950000183081.b.j	ENSGT00950000183100.A.a
River trout	MODERN SPECIES	37	wfdc1 (ENSSTUG00000016970) #18	utp4 (ENSSTUG00000017003)	chtf8 (ENSSTUG00000017177)	has3 (ENSSTUG00000017184)	TANGO6 (ENSSTUG00000017199)	ENSSTUG00000017271	zc3h18 (ENSSTUG00000017301)	trhr2 (ENSSTUG00000017368)	zfpm1 (ENSSTUG00000017382)	ces3 (ENSSTUG00000017440)	foxl1 (ENSSTUG00000017632) #37	GAN (ENSSTUG00000017650)	CMIP (ENSSTUG00000017710)	ENSSTUG00000018001	meak7 (ENSSTUG00000018023) #20	klhl36 (ENSSTUG00000018039) #22	cotl1 (ENSSTUG00000018061) #21	tat (ENSSTUG00000018107)	pdf (ENSSTUG00000018190)	si:dkey-238o13.4 (ENSSTUG00000018209)	vps9d1 (ENSSTUG00000018226)	ENSSTUG00000018302	slc10a3 (ENSSTUG00000007365)	chmp1a (ENSSTUG00000007368)	ENSSTUG00000007400	ENSSTUG00000007402	vps4a (ENSSTUG00000007423)	SNTB2 (ENSSTUG00000008169)	spire2 (ENSSTUG00000008187)	adat1 (ENSSTUG00000008197)	wwp2 (ENSSTUG00000008254)
Atlantic salmon	MODERN SPECIES	1	has3 (ENSSSAG00000086235)	tango6 (ENSSSAG00000047325)	ENSSSAG00000108931	zc3h18 (ENSSSAG00000121415)	trhr2 (ENSSSAG00000047306)	zfpm1 (ENSSSAG00000047291)	ces3 (ENSSSAG00000046473)	ENSSSAG00000110381	ENSSSAG00000108970 #37	ENSSSAG00000085944	ENSSSAG00000045924	ENSSSAG00000045058	plcg2 (ENSSSAG00000044956)	tldc1 (ENSSSAG00000044932) #20	cotl1 (ENSSSAG00000044891) #21	klhl36 (ENSSSAG00000044883) #22	tat (ENSSSAG00000007115)	pdf (ENSSSAG00000043597)	ENSSSAG00000007588	vps9d1 (ENSSSAG00000043474)	znf276 (ENSSSAG00000043366)	FANCA (ENSSSAG00000043299)	slc10a3 (ENSSSAG00000043287)	chmp1a (ENSSSAG00000043225)	ENSSSAG00000098130	vps4a (ENSSSAG00000034600)	ENSSSAG00000104009	ENSSSAG00000033083	spire2 (ENSSSAG00000032969)	ENSSSAG00000032666	ENSSSAG00000007362
Oncorhynchus	ANCESTRAL SPECIES	10	ENSGT00940000153533.b.d	ENSGT00400000025006.c	ENSGT00390000010337.B.a.a.k	ENSGT00390000010938	ENSGT00940000166375.g.b	ENSGT00730000111190.e	ENSGT01100000263484.B.a.b	ENSGT00530000063823.b.a.h	ENSGT00940000166187	ENSGT00940000162251.i #37	ENSGT00940000155273.i.a	ENSGT00390000018220.f	ENSGT00940000157517.m.b	ENSGT00940000158087 #20	ENSGT00390000012498.d #21	ENSGT00940000157543.fb.a #22	ENSGT00940000156704.c	ENSGT00390000018698.c	ENSGT01030000235114.d	ENSGT00390000015057.a	ENSGT00390000007852	ENSGT00950000182808.b.b.d	ENSGT00950000182832.D.a.l	ENSGT00940000157319.v	ENSGT00950000182863.A.a.a.p	ENSGT00390000003058.b.a.b.j.a	ENSGT00940000157942	ENSGT00940000154635.b.c	ENSGT00950000183081.b.j	ENSGT00950000183100.A.a	ENSGT00390000009328.m
Oncorhynchus_a	ANCESTRAL SPECIES	5	ENSGT00940000153533.b.d	ENSGT00400000025006.c	ENSGT00390000010337.B.a.a.k	ENSGT00390000010938	ENSGT00940000166375.g.b	ENSGT00730000111190.e	ENSGT01100000263484.B.a.b	ENSGT00530000063823.b.a.h	ENSGT00940000166187	ENSGT00940000162251.i #37	ENSGT00940000155273.i.a	ENSGT00390000018220.f	ENSGT00940000157517.m.b	ENSGT00940000158087 #20	ENSGT00390000012498.d #21	ENSGT00940000157543.fb.a #22	ENSGT00940000156704.c	ENSGT00390000018698.c	ENSGT01030000235114.d	ENSGT00390000015057.a	ENSGT00390000007852	ENSGT00950000182808.b.b.d	ENSGT00950000182832.D.a.l	ENSGT00940000157319.v	ENSGT00950000182863.A.a.a.p	ENSGT00390000003058.b.a.b.j.a	ENSGT00940000157942	ENSGT00940000154635.b.c	ENSGT00950000183081.b.j	ENSGT01050000247764	ENSGT00390000009328.m
Coho salmon	MODERN SPECIES	14	wfdc1 (ENSOKIG00005049409) #18	UTP4 (ENSOKIG00005049379)	chtf8 (ENSOKIG00005049368)	has3 (ENSOKIG00005049366)	TANGO6 (ENSOKIG00005049350)	ENSOKIG00005049337	zc3h18 (ENSOKIG00005049329)	trhr2 (ENSOKIG00005049319)	zfpm1 (ENSOKIG00005049309)	ces3 (ENSOKIG00005049181)	foxl1 (ENSOKIG00005049152) #37	GAN (ENSOKIG00005049120)	CMIP (ENSOKIG00005049093)	meak7 (ENSOKIG00005049085) #20	cotl1 (ENSOKIG00005049082) #21	klhl36 (ENSOKIG00005049081) #22	tat (ENSOKIG00005049024)	pdf (ENSOKIG00005049009)	ENSOKIG00005049006	ENSOKIG00005048999	vps9d1 (ENSOKIG00005048959)	ENSOKIG00005048887	slc10a3 (ENSOKIG00005048869)	chmp1a (ENSOKIG00005048852)	vps4a (ENSOKIG00005048831)	SNTB2 (ENSOKIG00005048821)	spire2 (ENSOKIG00005048818)	adat1 (ENSOKIG00005048795)	ENSOKIG00005048169	ENSOKIG00005048085	ENSOKIG00005048073
Chinook salmon	MODERN SPECIES	10	utp4 (ENSOTSG00005004844)	chtf8 (ENSOTSG00005004842)	has3 (ENSOTSG00005004841)	TANGO6 (ENSOTSG00005004838)	ENSOTSG00005004837	zc3h18 (ENSOTSG00005004830)	trhr2 (ENSOTSG00005004829)	zfpm1 (ENSOTSG00005004825)	ces3 (ENSOTSG00005004738)	foxl1 (ENSOTSG00005004730) #37	GAN (ENSOTSG00005004653)	CMIP (ENSOTSG00005004650)	plcg2 (ENSOTSG00005004648)	meak7 (ENSOTSG00005004646) #20	cotl1 (ENSOTSG00005004644) #21	klhl36 (ENSOTSG00005004643) #22	tat (ENSOTSG00005004576)	pdf (ENSOTSG00005004573)	vps9d1 (ENSOTSG00005004540)	slc10a3 (ENSOTSG00005004538)	chmp1a (ENSOTSG00005004537)	vps4a (ENSOTSG00005004535)	SNTB2 (ENSOTSG00005004533)	spire2 (ENSOTSG00005004532)	adat1 (ENSOTSG00005004530)	wwp2 (ENSOTSG00005002481)	ENSOTSG00005001953	ENSOTSG00005036962	coq9 (ENSOTSG00005036874)	ciapin1 (ENSOTSG00005036872)	ENSOTSG00005036871
Rainbow trout	MODERN SPECIES	11	wfdc1 (ENSOMYG00000014783) #18	UTP4 (ENSOMYG00000014661)	chtf8 (ENSOMYG00000052693)	has3 (ENSOMYG00000014632)	TANGO6 (ENSOMYG00000014611)	ENSOMYG00000014597	zc3h18 (ENSOMYG00000014577)	trhr2 (ENSOMYG00000014531)	zfpm1 (ENSOMYG00000014525)	ces3 (ENSOMYG00000014114)	ENSOMYG00000014038 #37	ENSOMYG00000013997	ENSOMYG00000013932	meak7 (ENSOMYG00000013887) #20	cotl1 (ENSOMYG00000013874) #21	klhl36 (ENSOMYG00000013869) #22	tat (ENSOMYG00000013818)	pdf (ENSOMYG00000013796)	ENSOMYG00000013779	vps9d1 (ENSOMYG00000013681)	ENSOMYG00000013582	ENSOMYG00000013545	chmp1a (ENSOMYG00000013532)	vps4a (ENSOMYG00000013414)	ENSOMYG00000013290	spire2 (ENSOMYG00000013243)	ENSOMYG00000063687	ENSOMYG00000013130	ENSOMYG00000012799	ENSOMYG00000012625	polr2c (ENSOMYG00000012596)
Huchen	MODERN SPECIES	501											foxl1 (ENSHHUG00000000168) #37	GAN (ENSHHUG00000000212)	CMIP (ENSHHUG00000000314)	meak7 (ENSHHUG00000000531) #20	cotl1 (ENSHHUG00000000539) #21	klhl36 (ENSHHUG00000000556) #22	tat (ENSHHUG00000000557)	pdf (ENSHHUG00000000639)	si:dkey-238o13.4 (ENSHHUG00000000649)	vps9d1 (ENSHHUG00000000678)	ENSHHUG00000000817	ENSHHUG00000000848	slc10a3 (ENSHHUG00000000908)	chmp1a (ENSHHUG00000000912)	vps4a (ENSHHUG00000000953)	SNTB2 (ENSHHUG00000001074)	spire2 (ENSHHUG00000001080)	ENSHHUG00000001093	adat1 (ENSHHUG00000001109)	wwp2 (ENSHHUG00000001143)	ENSHHUG00000001519
Salmoninae	ANCESTRAL SPECIES	137								ENSGT00530000063823.b.a.g	ENSGT00940000163421.a.c.p	ENSGT00390000009535 #26	ENSGT00940000162251.j #37	ENSGT00940000155273.i.b	ENSGT00390000018220.e	ENSGT00940000157517.m.a	ENSGT00390000012498.c #21	ENSGT00940000157543.fb.b #22	ENSGT00940000166411	ENSGT00940000156704.d	ENSGT01060000248783	ENSGT00390000018698.d	ENSGT00530000063956.b.a	ENSGT01030000235114.c	ENSGT00390000015057.b	ENSGT00940000158841	ENSGT00950000182808.b.b.c	ENSGT00950000182832.D.a.k	ENSGT00940000158102	ENSGT00940000157319.u.a	ENSGT00950000182863.A.a.a.o	ENSGT00390000003058.b.a.b.j.b	ENSGT00940000162986
Huchen	MODERN SPECIES	12								ENSHHUG00000022675	ENSHHUG00000022681	kiaa0513 (ENSHHUG00000022684) #26	foxl1 (ENSHHUG00000022695) #37	GAN (ENSHHUG00000022701)	CMIP (ENSHHUG00000022718)	plcg2 (ENSHHUG00000022735)	cotl1 (ENSHHUG00000022852) #21	klhl36 (ENSHHUG00000022860) #22	zgc:56622 (ENSHHUG00000022870)	tat (ENSHHUG00000022879)	ENSHHUG00000022911	pdf (ENSHHUG00000022915)	ENSHHUG00000022920	si:dkey-238o13.4 (ENSHHUG00000022925)	vps9d1 (ENSHHUG00000022948)	znf276 (ENSHHUG00000023153)	slc10a3 (ENSHHUG00000023167)	chmp1a (ENSHHUG00000023169)	cdk10 (ENSHHUG00000023171)	vps4a (ENSHHUG00000023320)	SNTB2 (ENSHHUG00000023605)	spire2 (ENSHHUG00000023611)	chst6 (ENSHHUG00000023626)
Salmoninae_a	ANCESTRAL SPECIES	1	ENSGT00390000014299.e #18	ENSGT00940000153533.b.c	ENSGT00400000025006.d	ENSGT00390000010337.B.a.a.l	ENSGT00940000166375.g.a	ENSGT00730000111190.f	ENSGT01100000263484.B.a.a	ENSGT00530000063823.b.a.g	ENSGT00940000163421.a.c.p	ENSGT00390000009535 #26	ENSGT00940000162251.j #37	ENSGT00940000155273.i.b	ENSGT00390000018220.e	ENSGT00940000157517.m.a	ENSGT00390000012498.c #21	ENSGT00940000157543.fb.b #22	ENSGT00940000166411	ENSGT00940000156704.d	ENSGT01060000248783	ENSGT00390000018698.d	ENSGT00530000063956.b.a	ENSGT01030000235114.c	ENSGT00390000015057.b	ENSGT00940000158841	ENSGT00950000182808.b.b.c	ENSGT00950000182832.D.a.k	ENSGT00940000158102	ENSGT00940000157319.u.a	ENSGT00950000182863.A.a.a.o	ENSGT00390000003058.b.a.b.j.b	ENSGT00940000162986
Salmo	ANCESTRAL SPECIES	9	ENSGT00940000153533.b.c	ENSGT00400000025006.d	ENSGT00390000010337.B.a.a.l	ENSGT00940000166375.g.a	ENSGT00730000111190.f	ENSGT01100000263484.B.a.a	ENSGT00530000063823.b.a.g	ENSGT00940000163421.a.c.p	ENSGT00390000009535 #26	ENSGT00940000162251.j #37	ENSGT00990000212684	ENSGT00940000155273.i.b	ENSGT00390000018220.e	ENSGT00940000157517.m.a	ENSGT00390000012498.c #21	ENSGT00940000157543.fb.b #22	ENSGT00940000166411	ENSGT00940000156704.d	ENSGT01060000248783	ENSGT00390000018698.d	ENSGT00530000063956.b.a	ENSGT01030000235114.c	ENSGT00390000015057.b	ENSGT00940000158841.l	ENSGT00950000182808.b.b.c	ENSGT00950000182832.D.a.k	ENSGT00940000158102	ENSGT00940000157319.u.a	ENSGT00950000182863.A.a.a.o	ENSGT00390000003058.b.a.b.j.b	ENSGT00940000162986
Atlantic salmon	MODERN SPECIES	7	has3 (ENSSSAG00000082559)	ENSSSAG00000006069	zc3h18 (ENSSSAG00000006103)	trhr2 (ENSSSAG00000006287)	zfpm1 (ENSSSAG00000006344)	ENSSSAG00000104260	ENSSSAG00000115335	kiaa0513 (ENSSSAG00000006384) #26	foxl1 (ENSSSAG00000046408) #37	ENSSSAG00000094793	ENSSSAG00000006490	ENSSSAG00000006567	plcg2 (ENSSSAG00000006779)	ENSSSAG00000091285	cotl1 (ENSSSAG00000098390) #21	klhl36 (ENSSSAG00000007057) #22	zgc:56622 (ENSSSAG00000007066)	tat (ENSSSAG00000043630)	ENSSSAG00000103785	ENSSSAG00000106292	ENSSSAG00000108664	ENSSSAG00000007601	znf276 (ENSSSAG00000007855)	ENSSSAG00000007864	chmp1a (ENSSSAG00000007872)	cdk10 (ENSSSAG00000007908)	vps4a (ENSSSAG00000008067)	ENSSSAG00000120224	spire2 (ENSSSAG00000008261)	chst6 (ENSSSAG00000008266)	tmem231 (ENSSSAG00000008274)
Salmoninae	ANCESTRAL SPECIES	370							ENSGT00390000012496.a.d.b	ENSGT00390000019377.b.f.h	ENSGT00980000202612	ENSGT00940000161679.a.e	ENSGT00390000015060.kb.a.b	ENSGT00940000168097.a	ENSGT00390000016421.b.a.e	ENSGT00940000166160.ab.a	ENSGT00550000074968.i	ENSGT00940000157543.gb #22	ENSGT00900000141090.t.sb.b	ENSGT00730000110915.b.d.b	ENSGT00940000158408.k	ENSGT01050000244864.C.e.f	ENSGT01050000244864.D.s.b	ENSGT00940000175300	ENSGT00940000164822.db.a	ENSGT00940000157784.c.c.d	ENSGT00940000156556.g.g	ENSGT00940000159755.h	ENSGT00520000055635.c.a.a.b.f.a	ENSGT00940000161118	ENSGT00990000204624.e	ENSGT00940000175333.b	ENSGT00940000164706.b.e
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000157543.gb #22
Salmo	ANCESTRAL SPECIES	15	ENSGT00390000001447.ec.b	ENSGT00390000001447.ec.a.b	ENSGT01090000260051.b.b.dc.b.g	ENSGT00940000156563.b.`b.a	ENSGT01030000234567.B.a.a.b.a.a.d	ENSGT00940000164480.a.a.h.a	ENSGT00390000012496.a.d.b	ENSGT00390000019377.b.f.h	ENSGT00980000202612	ENSGT00940000161679.a.e	ENSGT00390000015060.kb.a.b	ENSGT00940000168097.a	ENSGT00390000016421.b.a.e	ENSGT00940000166160.ab.a	ENSGT00550000074968.i	ENSGT00940000157543.gb #22	ENSGT00900000141090.t.sb.b	ENSGT00730000110915.b.d.b	ENSGT00940000158408.k.a	ENSGT01050000244864.C.e.f	ENSGT01050000244864.D.s.b	ENSGT00940000164822.db.a.c	ENSGT00940000175300	ENSGT00940000157784.c.c.d	ENSGT00940000156556.g.g	ENSGT00940000159755.h	ENSGT00520000055635.c.a.a.b.f.a	ENSGT00940000161118	ENSGT00990000204624.e	ENSGT00940000175333.b	ENSGT00940000164706.b.e
River trout	MODERN SPECIES	16	ackr3a (ENSSTUG00000006992)	ENSSTUG00000006999	ENSSTUG00000007146	ENSSTUG00000007158	zp3e (ENSSTUG00000007221)	nhlh2 (ENSSTUG00000007225)	vangl1 (ENSSTUG00000007230)	casq2 (ENSSTUG00000007253)	ENSSTUG00000007549	SLC5A3 (ENSSTUG00000007555)	atp5po (ENSSTUG00000007560)	ENSSTUG00000007585	DOP1B (ENSSTUG00000007601)	morc3a (ENSSTUG00000007695)	chaf1b (ENSSTUG00000007711)	ENSSTUG00000007736 #22	BCL9 (ENSSTUG00000007749)	acp6 (ENSSTUG00000007757)	gja5a (ENSSTUG00000007814)	gja8a (ENSSTUG00000007818)	ENSSTUG00000007843	ENSSTUG00000007885	ENSSTUG00000007902	ENSSTUG00000008002	fstl1b (ENSSTUG00000008018)	LRRC58 (ENSSTUG00000008144)	GPR156 (ENSSTUG00000008151)	GSK3B (ENSSTUG00000008181)	nr1i2 (ENSSTUG00000008767)	ENSSTUG00000008781	ENSSTUG00000008785
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00940000157543.gb #22
Rainbow trout	MODERN SPECIES	21	ENSOMYG00000014060	ENSOMYG00000060193	ENSOMYG00000014083	ENSOMYG00000014093	ENSOMYG00000014098	nhlh2 (ENSOMYG00000014105)	ENSOMYG00000067696	vangl1 (ENSOMYG00000014112)	casq2 (ENSOMYG00000014149)	ENSOMYG00000014265	atp5po (ENSOMYG00000014271)	ENSOMYG00000014299	DOP1B (ENSOMYG00000014336)	morc3a (ENSOMYG00000049261)	chaf1b (ENSOMYG00000014428)	ENSOMYG00000014447 #22	ENSOMYG00000063437	BCL9 (ENSOMYG00000014454)	ENSOMYG00000066437	ENSOMYG00000056441	acp6 (ENSOMYG00000014462)	gja5a (ENSOMYG00000049227)	gja8a (ENSOMYG00000014482)	ENSOMYG00000051119	ENSOMYG00000000688	ENSOMYG00000014512	ENSOMYG00000053615	ENSOMYG00000049653	ENSOMYG00000014551	fstl1b (ENSOMYG00000014558)	LRRC58 (ENSOMYG00000014581)
Huchen	MODERN SPECIES	1850							vangl1 (ENSHHUG00000004192)	casq2 (ENSHHUG00000004065)	SLC5A3 (ENSHHUG00000003985)	atp5po (ENSHHUG00000003884)	ENSHHUG00000003877	DOP1B (ENSHHUG00000003870)	ENSHHUG00000003868	morc3a (ENSHHUG00000003859)	chaf1b (ENSHHUG00000003850)	ENSHHUG00000003846 #22	ENSHHUG00000003817
Elephant shark	MODERN SPECIES	1497	CMIP (ENSCMIG00000013528)	plcg2 (ENSCMIG00000013497)	sdr42e1 (ENSCMIG00000013476)	mphosph6 (ENSCMIG00000013473)	CDH13 (ENSCMIG00000013434)	ENSCMIG00000013420	mlycd (ENSCMIG00000013412) #8	ENSCMIG00000013404	ENSCMIG00000013400 #7	ENSCMIG00000013393	kcng4a (ENSCMIG00000013384) #17	wfdc1 (ENSCMIG00000013374) #18	ATP2C2 (ENSCMIG00000013306) #19	MEAK7 (ENSCMIG00000013273) #20	cotl1 (ENSCMIG00000013271) #21	klhl36 (ENSCMIG00000013270) #22	USP10 (ENSCMIG00000013134) #23	CRISPLD2 (ENSCMIG00000013045) #24	ENSCMIG00000013001	zdhhc7 (ENSCMIG00000012972) #25	ENSCMIG00000012964	ENSCMIG00000012956 #37	FOXC2 (ENSCMIG00000012954) #36	mthfsd (ENSCMIG00000012947) #35	irf8 (ENSCMIG00000012939) #33	dusp22 (ENSCMIG00000012933)	cox4i1 (ENSCMIG00000012928) #32	emc8 (ENSCMIG00000012926) #31	gins2 (ENSCMIG00000012924) #29	gse1b (ENSCMIG00000012919) #28	ENSCMIG00000012913