Euteleostomi ANCESTRAL SPECIES 167 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00940000157125 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00530000063023.B ENSGT00940000158741 ENSGT00390000017671.a ENSGT00940000178110 Sarcopterygii ANCESTRAL SPECIES 234 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.B ##29 ENSGT01020000230359.A ##29 Tetrapoda ANCESTRAL SPECIES 40 ENSGT00390000009586 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 Amniota ANCESTRAL SPECIES 7 ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263710 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B ##29 ENSGT00550000075117 ENSGT00950000183099.u.b ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00940000160239 ENSGT00390000003571 ENSGT00940000155697.A Mammalia ANCESTRAL SPECIES 4 ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263710 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B ##29 ENSGT00550000075117 ENSGT00950000183099.u.a ENSGT00950000183099.u.b.a ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00940000160239 ENSGT00390000003571 Theria ANCESTRAL SPECIES ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263710 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B ##29 ENSGT00550000075117 ENSGT00950000183099.u.a ENSGT00940000164532 ENSGT00950000183099.u.b.a.a.a.a ENSGT01050000244942.b.a.b ENSGT00950000183099.v ENSGT00950000183138.a.a.b Eutheria ANCESTRAL SPECIES 5 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263710 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000179751 ENSGT00940000157880 Boreoeutheria ANCESTRAL SPECIES 2 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263710 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000179751 ENSGT00940000157880 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Primates ANCESTRAL SPECIES 1 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Haplorrhini ANCESTRAL SPECIES 5 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Simiiformes ANCESTRAL SPECIES 1 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Platyrrhini ANCESTRAL SPECIES 22 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177.a ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00940000154222.d.b.d.a.a #25 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000015060.p #32 ENSGT00390000008295.b #34 ENSGT00870000136549.d #35 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 Cebidae ANCESTRAL SPECIES 22 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177.a ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00940000154222.d.b.d.a.a #25 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000015060.p #32 ENSGT00390000008295.b #34 ENSGT00870000136549.d #35 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b Cebidae_a ANCESTRAL SPECIES 12 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177.a ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00940000154222.d.b.d.a.a #25 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000015060.p #32 ENSGT00390000008295.b #34 ENSGT00870000136549.d #35 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b Capuchin MODERN SPECIES 21 ARPP21 (ENSCCAG00000032940) #18 PDCD6IP (ENSCCAG00000033058) #19 ENSCCAG00000020300 #20 CLASP2 (ENSCCAG00000000695) #21 UBP1 (ENSCCAG00000025627) #22 ENSCCAG00000025092 #23 FBXL2 (ENSCCAG00000025865) #24 ENSCCAG00000020103 #25 SUSD5 (ENSCCAG00000023728) #26 CRTAP (ENSCCAG00000021761) #27 GLB1 (ENSCCAG00000037373) #28 CCR4 (ENSCCAG00000019573) #29 TRIM71 (ENSCCAG00000024597) #30 CNOT10 (ENSCCAG00000020746) #31 ENSCCAG00000019874 #32 ENSCCAG00000014618 #33 DYNC1LI1 (ENSCCAG00000025596) #34 ENSCCAG00000031054 #35 CMTM6 (ENSCCAG00000036050) #36 CMTM7 (ENSCCAG00000021122) #37 Bolivian squirrel monkey MODERN SPECIES 83 ITGA9 (ENSSBOG00000029467) ENSSBOG00000030298 GOLGA4 (ENSSBOG00000020464) LRRFIP2 (ENSSBOG00000022125) MLH1 (ENSSBOG00000027454) EPM2AIP1 (ENSSBOG00000019592) ENSSBOG00000024937 TRANK1 (ENSSBOG00000032312) DCLK3 (ENSSBOG00000033741) STAC (ENSSBOG00000026974) ENSSBOG00000032297 ARPP21 (ENSSBOG00000029427) #18 ENSSBOG00000025175 CLASP2 (ENSSBOG00000028056) #21 ENSSBOG00000032065 UBP1 (ENSSBOG00000008483) #22 FBXL2 (ENSSBOG00000030790) #24 ENSSBOG00000023948 ##25 SUSD5 (ENSSBOG00000018900) #26 CRTAP (ENSSBOG00000034685) #27 GLB1 (ENSSBOG00000027999) #28 CCR4 (ENSSBOG00000020236) #29 TRIM71 (ENSSBOG00000034396) #30 ENSSBOG00000035797 CNOT10 (ENSSBOG00000034160) #31 ENSSBOG00000019688 DYNC1LI1 (ENSSBOG00000009907) #34 ENSSBOG00000031962 #32 CMTM6 (ENSSBOG00000023893) #36 CMTM7 (ENSSBOG00000025858) #37 U2SURP (ENSSBOG00000027984) Marmoset MODERN SPECIES 8 ITGA9 (ENSCJAG00000012661) GOLGA4 (ENSCJAG00000012602) ENSCJAG00000082213 LRRFIP2 (ENSCJAG00000012550) ENSCJAG00000076469 MLH1 (ENSCJAG00000012414) EPM2AIP1 (ENSCJAG00000012409) TRANK1 (ENSCJAG00000012388) DCLK3 (ENSCJAG00000012380) STAC (ENSCJAG00000012350) ARPP21 (ENSCJAG00000012301) #18 ENSCJAG00000012204 ENSCJAG00000078640 CLASP2 (ENSCJAG00000012094) #21 ENSCJAG00000075183 UBP1 (ENSCJAG00000012030) #22 FBXL2 (ENSCJAG00000012006) #24 SUSD5 (ENSCJAG00000043079) #26 CRTAP (ENSCJAG00000011966) #27 GLB1 (ENSCJAG00000011922) #28 CCR4 (ENSCJAG00000022769) #29 ENSCJAG00000075987 TRIM71 (ENSCJAG00000011921) #30 ENSCJAG00000075858 ENSCJAG00000083351 CNOT10 (ENSCJAG00000011843) #31 DYNC1LI1 (ENSCJAG00000011783) #34 CMTM6 (ENSCJAG00000040951) #36 CMTM7 (ENSCJAG00000043564) #37 ENSCJAG00000078801 CMTM8 (ENSCJAG00000011776) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1061 PDCD6IP (ENSANAG00000034605) #19 ENSANAG00000037803 CLASP2 (ENSANAG00000028181) #21 ENSANAG00000030646 #22 FBXL2 (ENSANAG00000032054) #24 ENSANAG00000038374 #25 SUSD5 (ENSANAG00000036819) #26 CRTAP (ENSANAG00000037231) #27 TMPPE (ENSANAG00000020099) GLB1 (ENSANAG00000028634) #28 CCR4 (ENSANAG00000017606) #29 TRIM71 (ENSANAG00000022657) #30 CNOT10 (ENSANAG00000033966) #31 ENSANAG00000019325 #32 DYNC1LI1 (ENSANAG00000036308) #34 ENSANAG00000029265 #35 ENSANAG00000026200 #36 ENSANAG00000027747 #37 CMTM8 (ENSANAG00000028101) Mas night monkey MODERN SPECIES 446 ENSANAG00000035603 ENSANAG00000019547 ENSANAG00000025961 ENSANAG00000029772 NANOGNB (ENSANAG00000031517) DPPA3 (ENSANAG00000028453) GDF3 (ENSANAG00000023971) APOBEC1 (ENSANAG00000027743) ENSANAG00000019248 ENSANAG00000028978 ENSANAG00000001909 ENSANAG00000033982 ENSANAG00000030301 ENSANAG00000021598 ENSANAG00000030757 ENSANAG00000028357 #22 ENSANAG00000031265 CD163 (ENSANAG00000029818) ENSANAG00000024833 ENSANAG00000033172 ENSANAG00000021808 ENSANAG00000029320 Catarrhini ANCESTRAL SPECIES 2 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00940000153169.A.b.b.a.a.a.b ENSGT00800000124177 ENSGT00950000182812.E ENSGT00390000009837.a.b ENSGT00940000153370.b ENSGT00390000005727.a.b.a.a.c ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000002414.`b.b ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00940000153309.c.a.e ENSGT00390000003114.e.b.b Hominoidea ANCESTRAL SPECIES 2 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00940000153169.A.b.b.a.a.a.b ENSGT00800000124177 ENSGT00950000182812.E ENSGT00390000009837.a.b ENSGT00940000153370.b ENSGT00390000005727.a.b.a.a.c ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000002414.`b.b ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00940000153309.c.a.e.b ENSGT00390000003114.e.b.b Hominidae ANCESTRAL SPECIES 2 ENSGT00390000001627.f.a ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00390000009837.a.b ENSGT00940000153370.b ENSGT00390000005727.a.b.a.a.c ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000002414.`b.b ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00390000009837.a.b ENSGT00940000153370.b ENSGT00390000005727.a.b.a.a.c ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000002414.`b.b ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00390000001627.f.a ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00390000009837.a.b ENSGT00940000153370.b ENSGT00390000005727.a.b.a.a.c ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000002414.`b.b ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000154397.b.c.b.b Pan ANCESTRAL SPECIES 2 ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00390000007084.c.b.k.a.b ENSGT00800000124177 ENSGT00950000182812.E ENSGT00390000009837.a.b ENSGT00940000153370.b ENSGT00390000005727.a.b.a.a.c ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00950000182901.a.a.b.b.a.b.a.b.b.b ENSGT00390000013700.n ENSGT00390000001827 #31 ENSGT00390000002414.`b.b ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b Chimpanzee MODERN SPECIES 16 ITGA9 (ENSPTRG00000014748) ENSPTRG00000023429 GOLGA4 (ENSPTRG00000014746) LRRFIP2 (ENSPTRG00000014745) ENSPTRG00000016733 MLH1 (ENSPTRG00000014743) EPM2AIP1 (ENSPTRG00000042530) ENSPTRG00000051367 TRANK1 (ENSPTRG00000014741) ENSPTRG00000045315 DCLK3 (ENSPTRG00000014739) STAC (ENSPTRG00000014737) ARPP21 (ENSPTRG00000014736) #18 PDCD6IP (ENSPTRG00000014735) #19 CLASP2 (ENSPTRG00000014734) #21 UBP1 (ENSPTRG00000014733) #22 FBXL2 (ENSPTRG00000014732) #24 SUSD5 (ENSPTRG00000041864) #26 CRTAP (ENSPTRG00000014728) #27 GLB1 (ENSPTRG00000014726) #28 CCR4 (ENSPTRG00000014725) #29 TRIM71 (ENSPTRG00000030286) #30 ENSPTRG00000044387 ENSPTRG00000046880 CNOT10 (ENSPTRG00000014722) #31 ENSPTRG00000042309 DYNC1LI1 (ENSPTRG00000014721) #34 CMTM6 (ENSPTRG00000043555) #36 CMTM7 (ENSPTRG00000014719) #37 CMTM8 (ENSPTRG00000014717) GPD1L (ENSPTRG00000043993) Bonobo MODERN SPECIES 16 ENSPPAG00000040137 GOLGA4 (ENSPPAG00000035295) LRRFIP2 (ENSPPAG00000039105) ENSPPAG00000023507 MLH1 (ENSPPAG00000031143) EPM2AIP1 (ENSPPAG00000021277) ENSPPAG00000031051 TRANK1 (ENSPPAG00000031125) ENSPPAG00000032170 ENSPPAG00000028394 STAC (ENSPPAG00000039982) ENSPPAG00000043215 ARPP21 (ENSPPAG00000032910) #18 PDCD6IP (ENSPPAG00000029413) #19 CLASP2 (ENSPPAG00000024744) #21 UBP1 (ENSPPAG00000028421) #22 FBXL2 (ENSPPAG00000031583) #24 SUSD5 (ENSPPAG00000022450) #26 CRTAP (ENSPPAG00000039721) #27 GLB1 (ENSPPAG00000037867) #28 CCR4 (ENSPPAG00000008693) #29 TRIM71 (ENSPPAG00000028362) #30 ENSPPAG00000036093 ENSPPAG00000033853 CNOT10 (ENSPPAG00000027061) #31 ENSPPAG00000001545 DYNC1LI1 (ENSPPAG00000036438) #34 CMTM6 (ENSPPAG00000034787) #36 ENSPPAG00000034531 #37 CMTM8 (ENSPPAG00000031220) GPD1L (ENSPPAG00000037452) Human MODERN SPECIES 15 DLEC1 (ENSG00000008226) PLCD1 (ENSG00000187091) VILL (ENSG00000136059) CTDSPL (ENSG00000144677) ITGA9 (ENSG00000144668) GOLGA4 (ENSG00000144674) LRRFIP2 (ENSG00000093167) MLH1 (ENSG00000076242) EPM2AIP1 (ENSG00000178567) TRANK1 (ENSG00000168016) DCLK3 (ENSG00000163673) STAC (ENSG00000144681) ARPP21 (ENSG00000172995) #18 PDCD6IP (ENSG00000170248) #19 CLASP2 (ENSG00000163539) #21 UBP1 (ENSG00000153560) #22 FBXL2 (ENSG00000153558) #24 SUSD5 (ENSG00000173705) #26 CRTAP (ENSG00000170275) #27 TMPPE (ENSG00000188167) GLB1 (ENSG00000170266) #28 CCR4 (ENSG00000183813) #29 TRIM71 (ENSG00000206557) #30 CNOT10 (ENSG00000182973) #31 DYNC1LI1 (ENSG00000144635) #34 CMTM6 (ENSG00000091317) #36 CMTM7 (ENSG00000153551) #37 CMTM8 (ENSG00000170293) GPD1L (ENSG00000152642) ZNF860 (ENSG00000197385) OSBPL10 (ENSG00000144645) Gorilla MODERN SPECIES 16 ITGA9 (ENSGGOG00000013044) ENSGGOG00000023150 GOLGA4 (ENSGGOG00000023859) LRRFIP2 (ENSGGOG00000001784) ENSGGOG00000041659 MLH1 (ENSGGOG00000016342) EPM2AIP1 (ENSGGOG00000027478) ENSGGOG00000041962 TRANK1 (ENSGGOG00000005691) ENSGGOG00000042033 DCLK3 (ENSGGOG00000016779) STAC (ENSGGOG00000013526) ARPP21 (ENSGGOG00000009337) #18 ENSGGOG00000024787 CLASP2 (ENSGGOG00000003446) #21 UBP1 (ENSGGOG00000023919) #22 FBXL2 (ENSGGOG00000002522) #24 SUSD5 (ENSGGOG00000038282) #26 CRTAP (ENSGGOG00000015793) #27 GLB1 (ENSGGOG00000015782) #28 CCR4 (ENSGGOG00000013366) #29 TRIM71 (ENSGGOG00000017133) #30 CNOT10 (ENSGGOG00000000171) #31 ENSGGOG00000036732 DYNC1LI1 (ENSGGOG00000015987) #34 CMTM6 (ENSGGOG00000042309) #36 ENSGGOG00000000777 #37 CMTM8 (ENSGGOG00000006035) GPD1L (ENSGGOG00000007182) OSBPL10 (ENSGGOG00000013853) STT3B (ENSGGOG00000013180) Orangutan MODERN SPECIES 16 ACAA1 (ENSPPYG00000014012) DLEC1 (ENSPPYG00000014013) PLCD1 (ENSPPYG00000014014) VILL (ENSPPYG00000014015) CTDSPL (ENSPPYG00000037385) ITGA9 (ENSPPYG00000014017) GOLGA4 (ENSPPYG00000014019) LRRFIP2 (ENSPPYG00000014020) MLH1 (ENSPPYG00000014021) TRANK1 (ENSPPYG00000014023) DCLK3 (ENSPPYG00000014025) STAC (ENSPPYG00000014026) ARPP21 (ENSPPYG00000014027) #18 PDCD6IP (ENSPPYG00000014028) #19 CLASP2 (ENSPPYG00000014029) #21 UBP1 (ENSPPYG00000014030) #22 FBXL2 (ENSPPYG00000014031) #24 SUSD5 (ENSPPYG00000014032) #26 CRTAP (ENSPPYG00000031727) #27 GLB1 (ENSPPYG00000014034) #28 TRIM71 (ENSPPYG00000014036) #30 CNOT10 (ENSPPYG00000014038) #31 ENSPPYG00000038202 DYNC1LI1 (ENSPPYG00000014039) #34 CMTM6 (ENSPPYG00000014040) #36 CMTM7 (ENSPPYG00000037433) #37 CMTM8 (ENSPPYG00000014042) GPD1L (ENSPPYG00000014044) OSBPL10 (ENSPPYG00000014045) STT3B (ENSPPYG00000014047) GADL1 (ENSPPYG00000014048) Gibbon MODERN SPECIES 19 ENSNLEG00000005086 GOLGA4 (ENSNLEG00000005062) LRRFIP2 (ENSNLEG00000004992) ENSNLEG00000033765 MLH1 (ENSNLEG00000004886) EPM2AIP1 (ENSNLEG00000018533) TRANK1 (ENSNLEG00000004872) ENSNLEG00000028218 DCLK3 (ENSNLEG00000004871) ENSNLEG00000033044 STAC (ENSNLEG00000004845) ARPP21 (ENSNLEG00000004823) #18 ENSNLEG00000028397 PDCD6IP (ENSNLEG00000004764) #19 CLASP2 (ENSNLEG00000004683) #21 UBP1 (ENSNLEG00000004651) #22 FBXL2 (ENSNLEG00000004561) #24 SUSD5 (ENSNLEG00000004546) #26 CRTAP (ENSNLEG00000004534) #27 GLB1 (ENSNLEG00000004433) #28 ENSNLEG00000035991 CCR4 (ENSNLEG00000018532) #29 TRIM71 (ENSNLEG00000004428) #30 ENSNLEG00000031285 CNOT10 (ENSNLEG00000004347) #31 ENSNLEG00000029679 DYNC1LI1 (ENSNLEG00000004303) #34 ENSNLEG00000034778 CMTM6 (ENSNLEG00000004289) #36 CMTM7 (ENSNLEG00000027296) #37 CMTM8 (ENSNLEG00000030002) Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00940000162610 ENSGT00950000183084.b.b ENSGT00940000161858 ENSGT00940000165055 ENSGT00940000157053 ENSGT00940000159828 ENSGT00550000074917 ENSGT00940000153783.b.b.c.a.a.a.e.a ENSGT00940000153404.a.m.a.b ENSGT00860000135739 ENSGT00950000182930.B ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000002414.`b.b ENSGT00390000008295.b #34 ENSGT00940000157911.a #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00940000153309.c.a.e ENSGT00390000003114.e.b.b Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00510000047914.b ENSGT00940000162610 ENSGT00950000183084.b.b ENSGT00940000161858 ENSGT00940000165055 ENSGT00940000157053 ENSGT00940000159828 ENSGT00550000074917 ENSGT00940000153783.b.b.c.a.a.a.e.a ENSGT00860000135739 ENSGT00950000182930.B ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000002414.`b.b ENSGT00390000008295.b #34 ENSGT00940000157911.a #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00940000153309.c.a.e ENSGT00390000003114.e.b.b Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00950000183084.b.b ENSGT00940000161858 ENSGT00940000165055 ENSGT00940000157053 ENSGT00940000159828 ENSGT00550000074917 ENSGT00940000153783.b.b.c.a.a.a.e.a ENSGT00860000135739 ENSGT00940000153404.a.m.a.b ENSGT00950000182930.B ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00500000045558.b ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000002414.`b.b ENSGT00390000008295.b #34 ENSGT00940000157911.a #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00940000153309.c.a.e ENSGT00390000003114.e.b.b Cercopithecinae_b ANCESTRAL SPECIES ENSGT00950000183084.b.b ENSGT00940000161858 ENSGT00940000165055 ENSGT00940000157053 ENSGT00940000159828 ENSGT00550000074917 ENSGT00940000153783.b.b.c.a.a.a.e.a ENSGT00860000135739 ENSGT00940000153404.a.m.a.b ENSGT00950000182930.B ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00500000045558.b ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000002414.`b.b ENSGT00390000008295.b #34 ENSGT00940000157911.a #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Cercopithecinae_d ANCESTRAL SPECIES 16 ENSGT00940000162610 ENSGT00950000183084.b.b ENSGT00940000161858 ENSGT00940000157053 ENSGT00940000159828 ENSGT00550000074917 ENSGT00940000153783.b.b.c.a.a.a.e.a ENSGT00860000135739 ENSGT00940000153404.a.m.a.b ENSGT00950000182930.B ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00500000045558.b ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000013700.n ENSGT00950000183030.m.a.a.b.b.b.a.a ENSGT00390000002414.`b.b ENSGT00390000008295.b #34 ENSGT00940000157911.a #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b Sooty mangabey MODERN SPECIES 458 RTP4 (ENSCATG00000040867) MASP1 (ENSCATG00000018550) RTP1 (ENSCATG00000044988) ST6GAL1 (ENSCATG00000045114) ADIPOQ (ENSCATG00000042041) RFC4 (ENSCATG00000030055) ENSCATG00000039271 ENSCATG00000041517 ENSCATG00000042744 KNG1 (ENSCATG00000033074) STAC (ENSCATG00000043527) ARPP21 (ENSCATG00000032088) #18 ENSCATG00000039078 PDCD6IP (ENSCATG00000039590) #19 CLASP2 (ENSCATG00000037976) #21 UBP1 (ENSCATG00000038795) #22 FBXL2 (ENSCATG00000036185) #24 ENSCATG00000033646 ENSCATG00000041937 #26 ENSCATG00000008562 #27 GLB1 (ENSCATG00000030809) #28 CCR4 (ENSCATG00000006477) #29 TRIM71 (ENSCATG00000039860) #30 CNOT10 (ENSCATG00000034330) #31 ENSCATG00000032297 ENSCATG00000000280 ENSCATG00000039673 DYNC1LI1 (ENSCATG00000041634) #34 ENSCATG00000030998 #36 CMTM7 (ENSCATG00000014394) #37 CMTM8 (ENSCATG00000033422) Drill MODERN SPECIES 1369 ENSMLEG00000032828 #21 ENSMLEG00000041818 #21 UBP1 (ENSMLEG00000032119) #22 FBXL2 (ENSMLEG00000036278) #24 ENSMLEG00000040122 SUSD5 (ENSMLEG00000030779) #26 CRTAP (ENSMLEG00000035569) #27 GLB1 (ENSMLEG00000001975) #28 TRIM71 (ENSMLEG00000031204) #30 Olive baboon MODERN SPECIES 11 RPL39L (ENSPANG00000040014) ST6GAL1 (ENSPANG00000024521) ENSPANG00000049097 ADIPOQ (ENSPANG00000042519) RFC4 (ENSPANG00000023162) EIF4A2 (ENSPANG00000014790) KNG1 (ENSPANG00000012547) ENSPANG00000045351 STAC (ENSPANG00000016680) ARPP21 (ENSPANG00000009589) #18 ENSPANG00000034552 ENSPANG00000033986 ENSPANG00000049104 ENSPANG00000018324 #19 CLASP2 (ENSPANG00000006443) #21 UBP1 (ENSPANG00000003702) #22 FBXL2 (ENSPANG00000015885) #24 SUSD5 (ENSPANG00000015211) #26 CRTAP (ENSPANG00000001273) #27 GLB1 (ENSPANG00000008353) #28 CCR4 (ENSPANG00000006844) #29 ENSPANG00000037975 TRIM71 (ENSPANG00000029367) #30 ENSPANG00000009828 CNOT10 (ENSPANG00000023942) #31 ENSPANG00000039107 DYNC1LI1 (ENSPANG00000018878) #34 CMTM6 (ENSPANG00000016560) #36 CMTM7 (ENSPANG00000006660) #37 CMTM8 (ENSPANG00000009764) GPD1L (ENSPANG00000009800) Macaca ANCESTRAL SPECIES 5 ENSGT00950000183084.b.b ENSGT00940000161858 ENSGT00940000165055 ENSGT00940000157053 ENSGT00940000159828 ENSGT00550000074917 ENSGT00940000153783.b.b.c.a.a.a.e.a ENSGT00860000135739 ENSGT00940000153404.a.m.a.b ENSGT00950000182930.B ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00500000045558.b ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000002414.`b.b ENSGT00390000008295.b #34 ENSGT00940000157911.a #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00940000153309.c.a.e ENSGT00390000003114.e.b.b Pig-tailed macaque MODERN SPECIES 467 MASP1 (ENSMNEG00000031506) RTP1 (ENSMNEG00000043982) RPL39L (ENSMNEG00000002491) ST6GAL1 (ENSMNEG00000019258) ADIPOQ (ENSMNEG00000043042) RFC4 (ENSMNEG00000039111) ENSMNEG00000037282 ENSMNEG00000037200 ENSMNEG00000035119 KNG1 (ENSMNEG00000044746) STAC (ENSMNEG00000041036) ARPP21 (ENSMNEG00000044015) #18 ENSMNEG00000041440 PDCD6IP (ENSMNEG00000043620) #19 CLASP2 (ENSMNEG00000039636) #21 UBP1 (ENSMNEG00000044287) #22 FBXL2 (ENSMNEG00000034856) #24 ENSMNEG00000023330 SUSD5 (ENSMNEG00000041063) #26 CRTAP (ENSMNEG00000041104) #27 GLB1 (ENSMNEG00000035974) #28 CCR4 (ENSMNEG00000015017) #29 TRIM71 (ENSMNEG00000030331) #30 CNOT10 (ENSMNEG00000039743) #31 ENSMNEG00000030223 DYNC1LI1 (ENSMNEG00000031282) #34 CMTM6 (ENSMNEG00000035614) #36 CMTM7 (ENSMNEG00000045324) #37 CMTM8 (ENSMNEG00000042143) ENSMNEG00000030537 GPD1L (ENSMNEG00000036490) Macaca_a ANCESTRAL SPECIES 5 ENSGT00510000047914.b ENSGT00940000162610 ENSGT00950000183084.b.b ENSGT00940000161858 ENSGT00940000157053 ENSGT00940000159828 ENSGT00550000074917 ENSGT00940000153783.b.b.c.a.a.a.e.a ENSGT00860000135739 ENSGT00950000182930.B ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00500000045558.b ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01040000240667.a.b ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911.a #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT01050000245374.a Rhesus MODERN SPECIES 11 RTP4 (ENSMMUG00000013007) RTP1 (ENSMMUG00000052643) ST6GAL1 (ENSMMUG00000014905) ADIPOQ (ENSMMUG00000002684) RFC4 (ENSMMUG00000003704) EIF4A2 (ENSMMUG00000003702) ENSMMUG00000057833 KNG1 (ENSMMUG00000003700) STAC (ENSMMUG00000009614) ARPP21 (ENSMMUG00000015959) #18 ENSMMUG00000021448 ENSMMUG00000063957 ENSMMUG00000051294 PDCD6IP (ENSMMUG00000014069) #19 CLASP2 (ENSMMUG00000031438) #21 UBP1 (ENSMMUG00000016917) #22 FBXL2 (ENSMMUG00000031439) #24 SUSD5 (ENSMMUG00000007627) #26 CRTAP (ENSMMUG00000009010) #27 GLB1 (ENSMMUG00000020109) #28 TMPPE (ENSMMUG00000052664) ENSMMUG00000061607 CCR4 (ENSMMUG00000022661) #29 ENSMMUG00000059049 TRIM71 (ENSMMUG00000004538) #30 CNOT10 (ENSMMUG00000006596) #31 DYNC1LI1 (ENSMMUG00000005465) #34 CMTM6 (ENSMMUG00000001443) #36 CMTM7 (ENSMMUG00000009931) #37 ENSMMUG00000058979 CMTM8 (ENSMMUG00000012675) Crab-eating macaque MODERN SPECIES 11 RTP4 (ENSMFAG00000037745) MASP1 (ENSMFAG00000040221) RTP1 (ENSMFAG00000056809) ST6GAL1 (ENSMFAG00000062040) ENSMFAG00000055097 ADIPOQ (ENSMFAG00000000511) RFC4 (ENSMFAG00000030286) EIF4A2 (ENSMFAG00000044567) ENSMFAG00000002146 KNG1 (ENSMFAG00000041180) STAC (ENSMFAG00000054211) ARPP21 (ENSMFAG00000041762) #18 ENSMFAG00000012603 PDCD6IP (ENSMFAG00000043863) #19 CLASP2 (ENSMFAG00000001444) #21 UBP1 (ENSMFAG00000035445) #22 FBXL2 (ENSMFAG00000032187) #24 SUSD5 (ENSMFAG00000033317) #26 ENSMFAG00000065268 CRTAP (ENSMFAG00000017424) #27 GLB1 (ENSMFAG00000005291) #28 TMPPE (ENSMFAG00000061512) CCR4 (ENSMFAG00000016035) #29 ENSMFAG00000064357 CNOT10 (ENSMFAG00000041243) #31 DYNC1LI1 (ENSMFAG00000031574) #34 CMTM6 (ENSMFAG00000003973) #36 CMTM7 (ENSMFAG00000031701) #37 CMTM8 (ENSMFAG00000031079) GPD1L (ENSMFAG00000032829) OSBPL10 (ENSMFAG00000046094) Vervet Monkey MODERN SPECIES 6 RTP4 (ENSCSAG00000009173) MASP1 (ENSCSAG00000009191) RTP1 (ENSCSAG00000009199) RPL39L (ENSCSAG00000018929) ST6GAL1 (ENSCSAG00000009201) ADIPOQ (ENSCSAG00000009208) RFC4 (ENSCSAG00000009218) EIF4A2 (ENSCSAG00000009233) ENSCSAG00000009249 KNG1 (ENSCSAG00000009254) STAC (ENSCSAG00000009305) ARPP21 (ENSCSAG00000009323) #18 ENSCSAG00000009330 PDCD6IP (ENSCSAG00000009342) #19 CLASP2 (ENSCSAG00000009374) #21 UBP1 (ENSCSAG00000009395) #22 FBXL2 (ENSCSAG00000009410) #24 SUSD5 (ENSCSAG00000009416) #26 CRTAP (ENSCSAG00000009478) #27 GLB1 (ENSCSAG00000009502) #28 CCR4 (ENSCSAG00000018927) #29 TRIM71 (ENSCSAG00000009512) #30 CNOT10 (ENSCSAG00000009525) #31 DYNC1LI1 (ENSCSAG00000009575) #34 CMTM6 (ENSCSAG00000009588) #36 CMTM7 (ENSCSAG00000009595) #37 CMTM8 (ENSCSAG00000009600) GPD1L (ENSCSAG00000009615) OSBPL10 (ENSCSAG00000009622) STT3B (ENSCSAG00000009633) GADL1 (ENSCSAG00000009641) Rhinopithecus ANCESTRAL SPECIES 508 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000000673.b.c.a ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 Golden snub-nosed monkey MODERN SPECIES 1702 ENSRROG00000026236 ENSRROG00000036388 PDCD6IP (ENSRROG00000033332) #19 CLASP2 (ENSRROG00000030491) #21 UBP1 (ENSRROG00000031139) #22 FBXL2 (ENSRROG00000041276) #24 SUSD5 (ENSRROG00000036461) #26 CRTAP (ENSRROG00000035900) #27 GLB1 (ENSRROG00000035705) #28 CCR4 (ENSRROG00000025574) #29 TRIM71 (ENSRROG00000043296) #30 Black snub-nosed monkey MODERN SPECIES 1109 PDCD6IP (ENSRBIG00000034607) #19 CLASP2 (ENSRBIG00000044765) #21 UBP1 (ENSRBIG00000037949) #22 FBXL2 (ENSRBIG00000029151) #24 ENSRBIG00000018330 SUSD5 (ENSRBIG00000041093) #26 CRTAP (ENSRBIG00000027582) #27 GLB1 (ENSRBIG00000033594) #28 CCR4 (ENSRBIG00000031120) #29 Tarsier DUPLICATION Tarsier MODERN SPECIES 6571 PDCD6IP (ENSTSYG00000012850) ENSTSYG00000037581 CLASP2 (ENSTSYG00000009193) #21 ENSTSYG00000000705 #22 FBXL2 (ENSTSYG00000000704) #24 SUSD5 (ENSTSYG00000009115) #26 GLB1 (ENSTSYG00000014019) #28 TRIM71 (ENSTSYG00000033433) #30 Tarsier MODERN SPECIES 454 ENSTSYG00000034298 #22 Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Lemuriformes ANCESTRAL SPECIES 30 ENSGT01100000263710 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 Lemuriformes_a ANCESTRAL SPECIES 123 ENSGT01100000263710 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 Greater bamboo lemur MODERN SPECIES 267 CLASP2 (ENSPSMG00000025194) #21 UBP1 (ENSPSMG00000024910) #22 FBXL2 (ENSPSMG00000024875) #24 SUSD5 (ENSPSMG00000024866) #26 CRTAP (ENSPSMG00000024858) #27 GLB1 (ENSPSMG00000024839) #28 CCR4 (ENSPSMG00000024816) #29 TRIM71 (ENSPSMG00000024809) #30 ENSPSMG00000024804 CNOT10 (ENSPSMG00000024798) #31 DYNC1LI1 (ENSPSMG00000024748) #34 CMTM6 (ENSPSMG00000024739) #36 CMTM7 (ENSPSMG00000024733) #37 ENSPSMG00000024722 ENSPSMG00000024705 ENSPSMG00000024692 ENSPSMG00000024683 Coquerels sifaka MODERN SPECIES 360 ENSPCOG00000019551 CLASP2 (ENSPCOG00000024476) #21 UBP1 (ENSPCOG00000023294) #22 FBXL2 (ENSPCOG00000024413) #24 SUSD5 (ENSPCOG00000022964) #26 CRTAP (ENSPCOG00000016454) #27 GLB1 (ENSPCOG00000022814) #28 TRIM71 (ENSPCOG00000003560) #30 CNOT10 (ENSPCOG00000020249) #31 DYNC1LI1 (ENSPCOG00000000282) #34 CMTM6 (ENSPCOG00000017431) #36 CMTM7 (ENSPCOG00000015871) #37 CMTM8 (ENSPCOG00000020806) GPD1L (ENSPCOG00000006898) OSBPL10 (ENSPCOG00000013881) STT3B (ENSPCOG00000018661) Bushbaby MODERN SPECIES 117 CTDSPL (ENSOGAG00000004624) ENSOGAG00000034113 ITGA9 (ENSOGAG00000004436) GOLGA4 (ENSOGAG00000027706) ENSOGAG00000029650 LRRFIP2 (ENSOGAG00000008423) MLH1 (ENSOGAG00000008416) EPM2AIP1 (ENSOGAG00000032395) TRANK1 (ENSOGAG00000026991) DCLK3 (ENSOGAG00000028781) STAC (ENSOGAG00000007133) ARPP21 (ENSOGAG00000009701) #18 PDCD6IP (ENSOGAG00000006048) #19 CLASP2 (ENSOGAG00000006037) #21 ENSOGAG00000006046 UBP1 (ENSOGAG00000000962) #22 FBXL2 (ENSOGAG00000000961) #24 SUSD5 (ENSOGAG00000008438) #26 CRTAP (ENSOGAG00000024678) #27 TMPPE (ENSOGAG00000008436) GLB1 (ENSOGAG00000008431) #28 CCR4 (ENSOGAG00000008430) #29 TRIM71 (ENSOGAG00000015458) #30 CNOT10 (ENSOGAG00000007295) #31 DYNC1LI1 (ENSOGAG00000016162) #34 ENSOGAG00000026982 #36 ENSOGAG00000028641 CMTM7 (ENSOGAG00000005726) #37 CMTM8 (ENSOGAG00000013250) ENSOGAG00000025400 GPD1L (ENSOGAG00000013243) Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264025 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Glires ANCESTRAL SPECIES 2 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264025 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Rodentia ANCESTRAL SPECIES 2 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264025 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Rodentia_A ANCESTRAL SPECIES 29 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264025 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Hystricomorpha ANCESTRAL SPECIES 34 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264025 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880.d ENSGT00940000155488 Hystricomorpha_a ANCESTRAL SPECIES 45 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264025 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 Hystricomorpha_b ANCESTRAL SPECIES 42 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264025 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 Long-tailed chinchilla MODERN SPECIES 128 CTDSPL (ENSCLAG00000004547) ITGA9 (ENSCLAG00000004058) GOLGA4 (ENSCLAG00000005913) LRRFIP2 (ENSCLAG00000003180) MLH1 (ENSCLAG00000004334) EPM2AIP1 (ENSCLAG00000017557) ENSCLAG00000004029 TRANK1 (ENSCLAG00000003643) DCLK3 (ENSCLAG00000005385) STAC (ENSCLAG00000005121) ARPP21 (ENSCLAG00000007764) #18 ENSCLAG00000006281 ENSCLAG00000004325 ENSCLAG00000004047 CLASP2 (ENSCLAG00000008638) #21 UBP1 (ENSCLAG00000006836) #22 ENSCLAG00000008435 FBXL2 (ENSCLAG00000007695) #24 SUSD5 (ENSCLAG00000011153) #26 CRTAP (ENSCLAG00000010951) #27 TMPPE (ENSCLAG00000010807) GLB1 (ENSCLAG00000005577) #28 CCR4 (ENSCLAG00000004615) #29 TRIM71 (ENSCLAG00000004257) #30 CNOT10 (ENSCLAG00000005847) #31 Degu MODERN SPECIES 112 GOLGA4 (ENSODEG00000005969) ENSODEG00000019234 ENSODEG00000006044 MLH1 (ENSODEG00000006098) EPM2AIP1 (ENSODEG00000019311) TRANK1 (ENSODEG00000003882) ENSODEG00000003967 DCLK3 (ENSODEG00000003986) STAC (ENSODEG00000004015) ENSODEG00000004051 ENSODEG00000004084 ARPP21 (ENSODEG00000004233) #18 ENSODEG00000004411 ENSODEG00000004442 CLASP2 (ENSODEG00000004563) #21 UBP1 (ENSODEG00000004843) #22 ENSODEG00000004881 #24 ENSODEG00000004897 SUSD5 (ENSODEG00000004909) #26 CRTAP (ENSODEG00000004936) #27 ENSODEG00000004950 GLB1 (ENSODEG00000004977) #28 CCR4 (ENSODEG00000019140) #29 TRIM71 (ENSODEG00000005007) #30 ENSODEG00000003781 #31 ENSODEG00000003905 ENSODEG00000018979 ENSODEG00000018981 NET1 (ENSODEG00000003988) CALML3 (ENSODEG00000019023) ASB13 (ENSODEG00000004057) Guinea pig MODERN SPECIES 16 PLCD1 (ENSCPOG00000000596) VILL (ENSCPOG00000029985) CTDSPL (ENSCPOG00000000592) ITGA9 (ENSCPOG00000014650) GOLGA4 (ENSCPOG00000008525) LRRFIP2 (ENSCPOG00000038703) MLH1 (ENSCPOG00000003928) EPM2AIP1 (ENSCPOG00000022371) TRANK1 (ENSCPOG00000013754) DCLK3 (ENSCPOG00000002280) STAC (ENSCPOG00000031088) ARPP21 (ENSCPOG00000008780) #18 ENSCPOG00000003230 CLASP2 (ENSCPOG00000015184) #21 ENSCPOG00000037431 UBP1 (ENSCPOG00000009270) #22 FBXL2 (ENSCPOG00000013854) #24 SUSD5 (ENSCPOG00000009325) #26 CRTAP (ENSCPOG00000035810) #27 GLB1 (ENSCPOG00000004491) #28 TMPPE (ENSCPOG00000025403) Ccr4 (ENSCPOG00000035503) #29 TRIM71 (ENSCPOG00000004496) #30 CNOT10 (ENSCPOG00000005938) #31 Naked mole-rat female MODERN SPECIES 28 TRANK1 (ENSHGLG00000002458) DCLK3 (ENSHGLG00000002384) ENSHGLG00000039711 STAC (ENSHGLG00000001907) ENSHGLG00000001835 ARPP21 (ENSHGLG00000001335) #18 ENSHGLG00000050645 ENSHGLG00000036492 ENSHGLG00000050797 ENSHGLG00000035031 ENSHGLG00000033661 ENSHGLG00000040644 ENSHGLG00000001187 PDCD6IP (ENSHGLG00000004033) ENSHGLG00000003013 #21 UBP1 (ENSHGLG00000002333) #22 FBXL2 (ENSHGLG00000002144) #24 ENSHGLG00000002747 ENSHGLG00000037082 #24 SUSD5 (ENSHGLG00000040528) #26 CRTAP (ENSHGLG00000002614) #27 ENSHGLG00000037229 ENSHGLG00000002496 GLB1 (ENSHGLG00000002150) #28 ENSHGLG00000002090 #29 ENSHGLG00000001826 #30 ENSHGLG00000047516 ENSHGLG00000039776 ENSHGLG00000019891 ENSHGLG00000001731 #31 ENSHGLG00000001574 #34 Sciuridae ANCESTRAL SPECIES 37 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263710 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b.f #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 156 ENSSVLG00005024287 APOOL (ENSSVLG00005024251) ENSSVLG00005024204 ENSSVLG00005024140 ZNF711 (ENSSVLG00005024106) POF1B (ENSSVLG00005023983) ENSSVLG00005023891 DACH2 (ENSSVLG00005023583) KLHL4 (ENSSVLG00005023401) ENSSVLG00005023341 ENSSVLG00005023323 ENSSVLG00005023291 CPXCR1 (ENSSVLG00005023282) ENSSVLG00005023265 ENSSVLG00005023244 ENSSVLG00005023178 #22 ENSSVLG00005023139 ENSSVLG00005023114 ENSSVLG00005023085 PABPC5 (ENSSVLG00005023058) ENSSVLG00005022794 ENSSVLG00005022703 NAP1L3 (ENSSVLG00005022672) FAM133A (ENSSVLG00005022654) ENSSVLG00005022641 ENSSVLG00005022502 ENSSVLG00005022483 ENSSVLG00005022450 ENSSVLG00005022409 ENSSVLG00005022389 DIAPH2 (ENSSVLG00005021445) Eurasian red squirrel MODERN SPECIES 13 ENSSVLG00005003804 ENSSVLG00005003792 ALOX5 (ENSSVLG00005003729) ENSSVLG00005003702 ENSSVLG00005003684 ENSSVLG00005003664 ENSSVLG00005003648 ENSSVLG00005003631 ENSSVLG00005003579 ENSSVLG00005003534 ENSSVLG00005003522 ENSSVLG00005003511 ENSSVLG00005003498 ENSSVLG00005003469 ENSSVLG00005003459 ENSSVLG00005003435 #22 ENSSVLG00005003421 ENSSVLG00005003415 ENSSVLG00005003408 ENSSVLG00005003375 ENSSVLG00005003360 ENSSVLG00005003349 ENSSVLG00005003335 ENSSVLG00005003322 ENSSVLG00005003224 ENSSVLG00005003212 RBP3 (ENSSVLG00005003192) GDF2 (ENSSVLG00005003178) GDF10 (ENSSVLG00005003156) PTPN20 (ENSSVLG00005003065) ENSSVLG00005003026 Eurasian red squirrel MODERN SPECIES 18 QRFPR (ENSSVLG00005014858) NDNF (ENSSVLG00005014362) PRDM5 (ENSSVLG00005014293) MAD2L1 (ENSSVLG00005014204) ENSSVLG00005014083 PDE5A (ENSSVLG00005013841) FABP2 (ENSSVLG00005013640) USP53 (ENSSVLG00005013592) MYOZ2 (ENSSVLG00005013483) ENSSVLG00005013417 SEC24D (ENSSVLG00005013288) METTL14 (ENSSVLG00005013085) PRSS12 (ENSSVLG00005012955) ENSSVLG00005012895 ENSSVLG00005012798 ENSSVLG00005012769 #22 Eurasian red squirrel MODERN SPECIES 7 CTDSPL (ENSSVLG00005025247) ITGA9 (ENSSVLG00005012250) GOLGA4 (ENSSVLG00005012688) LRRFIP2 (ENSSVLG00005013687) MLH1 (ENSSVLG00005013997) EPM2AIP1 (ENSSVLG00005014305) DCLK3 (ENSSVLG00005014534) STAC (ENSSVLG00005014652) ENSSVLG00005014908 ARPP21 (ENSSVLG00005015042) #18 ENSSVLG00005015643 ENSSVLG00005015672 ENSSVLG00005015730 ENSSVLG00005015747 CLASP2 (ENSSVLG00005015931) #21 ENSSVLG00005016631 #22 FBXL2 (ENSSVLG00005016938) #24 ENSSVLG00005016987 SUSD5 (ENSSVLG00005017013) #26 CRTAP (ENSSVLG00005017097) #27 GLB1 (ENSSVLG00005017191) #28 CCR4 (ENSSVLG00005017231) #29 ENSSVLG00005017257 TRIM71 (ENSSVLG00005017310) #30 ENSSVLG00005017367 CNOT10 (ENSSVLG00005017438) #31 ENSSVLG00005017813 #34 ENSSVLG00005017871 CMTM6 (ENSSVLG00005017911) #36 CMTM7 (ENSSVLG00005017933) #37 CMTM8 (ENSSVLG00005018015) Marmotini ANCESTRAL SPECIES 12 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263710 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00940000154661.b.cb.a ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b.e #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 24 ENSMMMG00000011335 ENSMMMG00000011345 GOLGA4 (ENSMMMG00000011361) LRRFIP2 (ENSMMMG00000011434) MLH1 (ENSMMMG00000011531) EPM2AIP1 (ENSMMMG00000011565) ENSMMMG00000011569 TRANK1 (ENSMMMG00000011577) DCLK3 (ENSMMMG00000011687) STAC (ENSMMMG00000011699) ARPP21 (ENSMMMG00000011719) #18 ENSMMMG00000012340 ENSMMMG00000012359 ENSMMMG00000012382 CLASP2 (ENSMMMG00000012399) #21 ENSMMMG00000012782 #22 FBXL2 (ENSMMMG00000012899) #24 ENSMMMG00000012921 SUSD5 (ENSMMMG00000012926) #26 CRTAP (ENSMMMG00000012952) #27 TMPPE (ENSMMMG00000012974) GLB1 (ENSMMMG00000013001) #28 CCR4 (ENSMMMG00000013862) #29 TRIM71 (ENSMMMG00000013868) #30 CNOT10 (ENSMMMG00000013884) #31 DYNC1LI1 (ENSMMMG00000013909) #34 CMTM7 (ENSMMMG00000013916) #37 CMTM8 (ENSMMMG00000013921) ENSMMMG00000013931 OSBPL10 (ENSMMMG00000013949) STT3B (ENSMMMG00000013968) Alpin marmot MODERN SPECIES 7 CCNB2 (ENSMMMG00000011506) MYO1E (ENSMMMG00000011477) ENSMMMG00000011444 FAM81A (ENSMMMG00000011428) GCNT3 (ENSMMMG00000011425) GTF2A2 (ENSMMMG00000011388) BNIP2 (ENSMMMG00000011312) FOXB1 (ENSMMMG00000011291) ENSMMMG00000011269 ENSMMMG00000011237 ENSMMMG00000011212 RORA (ENSMMMG00000011194) VPS13C (ENSMMMG00000011042) ENSMMMG00000011035 ENSMMMG00000011024 ENSMMMG00000011016 #22 TLN2 (ENSMMMG00000010746) TPM1 (ENSMMMG00000009577) RPS27L (ENSMMMG00000009532) RAB8B (ENSMMMG00000009506) APH1B (ENSMMMG00000009477) CA12 (ENSMMMG00000009446) USP3 (ENSMMMG00000009199) ENSMMMG00000009191 ENSMMMG00000009185 HERC1 (ENSMMMG00000009068) DAPK2 (ENSMMMG00000009028) CIAO2A (ENSMMMG00000009021) SNX1 (ENSMMMG00000009009) SNX22 (ENSMMMG00000008995) PPIB (ENSMMMG00000008986) Marmotini_b ANCESTRAL SPECIES 24 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263710 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00940000154661.b.cb.a ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b.f #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Squirrel MODERN SPECIES 73 ENSSTOG00000001524 CTDSPL (ENSSTOG00000001517) ENSSTOG00000029563 ITGA9 (ENSSTOG00000009402) GOLGA4 (ENSSTOG00000019749) LRRFIP2 (ENSSTOG00000023775) MLH1 (ENSSTOG00000005413) EPM2AIP1 (ENSSTOG00000028877) ENSSTOG00000033099 TRANK1 (ENSSTOG00000027352) DCLK3 (ENSSTOG00000028839) STAC (ENSSTOG00000005934) ARPP21 (ENSSTOG00000008350) #18 ENSSTOG00000003420 CLASP2 (ENSSTOG00000002360) #21 UBP1 (ENSSTOG00000012083) #22 FBXL2 (ENSSTOG00000012071) #24 ENSSTOG00000024871 SUSD5 (ENSSTOG00000020774) #26 CRTAP (ENSSTOG00000022421) #27 GLB1 (ENSSTOG00000010026) #28 TRIM71 (ENSSTOG00000015191) #30 CNOT10 (ENSSTOG00000015174) #31 DYNC1LI1 (ENSSTOG00000012613) #34 CMTM6 (ENSSTOG00000012605) #36 CMTM7 (ENSSTOG00000012595) #37 CMTM8 (ENSSTOG00000013600) GPD1L (ENSSTOG00000032260) OSBPL10 (ENSSTOG00000013624) STT3B (ENSSTOG00000013598) GADL1 (ENSSTOG00000014390) Arctic ground squirrel MODERN SPECIES 11 VILL (ENSUPAG00010006192) CTDSPL (ENSUPAG00010006173) ITGA9 (ENSUPAG00010006117) GOLGA4 (ENSUPAG00010005954) LRRFIP2 (ENSUPAG00010005307) MLH1 (ENSUPAG00010005272) EPM2AIP1 (ENSUPAG00010005264) ENSUPAG00010005263 ENSUPAG00010005258 TRANK1 (ENSUPAG00010005066) DCLK3 (ENSUPAG00010005058) STAC (ENSUPAG00010005051) ARPP21 (ENSUPAG00010004968) #18 ENSUPAG00010004908 CLASP2 (ENSUPAG00010002896) #21 UBP1 (ENSUPAG00010002830) #22 FBXL2 (ENSUPAG00010002805) #24 SUSD5 (ENSUPAG00010002801) #26 CRTAP (ENSUPAG00010002794) #27 GLB1 (ENSUPAG00010002756) #28 CCR4 (ENSUPAG00010002745) #29 TRIM71 (ENSUPAG00010002736) #30 CNOT10 (ENSUPAG00010002658) #31 DYNC1LI1 (ENSUPAG00010002650) #34 CMTM6 (ENSUPAG00010002641) #36 CMTM7 (ENSUPAG00010002624) #37 CMTM8 (ENSUPAG00010002616) ENSUPAG00010002613 OSBPL10 (ENSUPAG00010002573) STT3B (ENSUPAG00010002543) GADL1 (ENSUPAG00010002514) Rodentia_B ANCESTRAL SPECIES 50 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Myomorpha ANCESTRAL SPECIES 26 ENSGT00940000159076 ENSGT00940000154960 ENSGT00940000162454 ENSGT00960000189448 ENSGT00940000156055 ENSGT00960000187586 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Muroidea ANCESTRAL SPECIES 27 ENSGT00940000154960 ENSGT00940000162454 ENSGT00960000189448 ENSGT00940000156055 ENSGT01020000230359.C.a.a.b ##29 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263856 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Muroidea_A ANCESTRAL SPECIES 6 ENSGT00940000159076 ENSGT00940000154960 ENSGT00940000162454 ENSGT00960000189448 ENSGT00940000156055 ENSGT01020000230359.C.a.a.b ##29 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263856 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.r ENSGT00940000157880 ENSGT00940000155488 Cricetidae ANCESTRAL SPECIES 4 ENSGT00530000069333.b ENSGT00940000159076 ENSGT00940000154960 ENSGT00940000162454 ENSGT00940000156055 ENSGT01020000230359.C.a.a.b ##29 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263856 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.r ENSGT00940000157880 ENSGT00940000155488 Cricetidae_B ANCESTRAL SPECIES 23 ENSGT00940000159076 ENSGT00940000154960 ENSGT00940000162454 ENSGT00940000156055 ENSGT01020000230359.C.a.a.b ##29 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263856 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.r ENSGT00940000157880 ENSGT00940000155488 Northern American deer mouse MODERN SPECIES 20 Lrrc2 (ENSPEMG00000000290) ENSPEMG00000015192 Ltf (ENSPEMG00000021984) Ccrl2 (ENSPEMG00000022959) ##29 Lrrfip2 (ENSPEMG00000023258) Mlh1 (ENSPEMG00000009556) Epm2aip1 (ENSPEMG00000015118) Trank1 (ENSPEMG00000006814) Dclk3 (ENSPEMG00000020900) Stac (ENSPEMG00000012752) Arpp21 (ENSPEMG00000009709) #18 Pdcd6ip (ENSPEMG00000019792) ENSPEMG00000019448 ENSPEMG00000027844 Clasp2 (ENSPEMG00000020217) #21 Ubp1 (ENSPEMG00000019557) #22 Fbxl2 (ENSPEMG00000010411) #24 Susd5 (ENSPEMG00000017129) #26 Crtap (ENSPEMG00000019653) #27 Tmppe (ENSPEMG00000019814) Glb1 (ENSPEMG00000019879) #28 Ccr4 (ENSPEMG00000019665) #29 Trim71 (ENSPEMG00000012573) #30 Cnot10 (ENSPEMG00000019896) #31 Dync1li1 (ENSPEMG00000019887) #34 Cmtm6 (ENSPEMG00000025692) #36 Cmtm7 (ENSPEMG00000019836) #37 Cmtm8 (ENSPEMG00000019608) ENSPEMG00000030099 ENSPEMG00000028076 Osbpl10 (ENSPEMG00000019755) Prairie vole MODERN SPECIES 13 Als2cl (ENSMOCG00000005468) Fam240a (ENSMOCG00000020891) ENSMOCG00000012926 Lrrc2 (ENSMOCG00000014750) ENSMOCG00000004293 Ltf (ENSMOCG00000012504) Lrrfip2 (ENSMOCG00000015703) Mlh1 (ENSMOCG00000019848) Epm2aip1 (ENSMOCG00000010160) Trank1 (ENSMOCG00000021711) Dclk3 (ENSMOCG00000022542) Stac (ENSMOCG00000016264) ENSMOCG00000004472 #18 Pdcd6ip (ENSMOCG00000022660) Clasp2 (ENSMOCG00000018288) #21 Ubp1 (ENSMOCG00000021363) #22 Fbxl2 (ENSMOCG00000014205) #24 Susd5 (ENSMOCG00000016903) #26 ENSMOCG00000019655 #27 Glb1 (ENSMOCG00000019733) #28 Ccr4 (ENSMOCG00000016957) #29 Trim71 (ENSMOCG00000018592) #30 Cnot10 (ENSMOCG00000018672) #31 Dync1li1 (ENSMOCG00000020559) #34 Cmtm6 (ENSMOCG00000001815) #36 ENSMOCG00000008730 #37 Cmtm8 (ENSMOCG00000010377) ENSMOCG00000012300 Osbpl10 (ENSMOCG00000019718) Stt3b (ENSMOCG00000021697) Gadl1 (ENSMOCG00000005000) Cricetinae ANCESTRAL SPECIES 6 ENSGT00940000161305 ENSGT00940000159076 ENSGT00940000154960 ENSGT00940000162454 ENSGT00940000156055 ENSGT01020000230359.C.a.a.b ##29 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263856 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT00390000010260 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.r ENSGT00940000157880 ENSGT00940000155488 Golden Hamster MODERN SPECIES 667 Als2cl (ENSMAUG00000022053) ENSMAUG00000011746 ENSMAUG00000012380 ENSMAUG00000005955 Ltf (ENSMAUG00000007952) Ccrl2 (ENSMAUG00000005636) ##29 Lrrfip2 (ENSMAUG00000014279) Mlh1 (ENSMAUG00000015550) Epm2aip1 (ENSMAUG00000010307) Trank1 (ENSMAUG00000004490) Dclk3 (ENSMAUG00000009394) Stac (ENSMAUG00000011037) Arpp21 (ENSMAUG00000021700) #18 Pdcd6ip (ENSMAUG00000016616) Clasp2 (ENSMAUG00000018050) #21 Ubp1 (ENSMAUG00000009072) #22 Fbxl2 (ENSMAUG00000006749) #24 Susd5 (ENSMAUG00000012731) #26 Crtap (ENSMAUG00000017404) #27 Glb1 (ENSMAUG00000017765) #28 Tmppe (ENSMAUG00000008240) Ccr4 (ENSMAUG00000010501) #29 Trim71 (ENSMAUG00000012924) #30 Cnot10 (ENSMAUG00000015396) #31 Dync1li1 (ENSMAUG00000016283) #34 Cmtm6 (ENSMAUG00000012707) #36 Cmtm7 (ENSMAUG00000021569) #37 Cmtm8 (ENSMAUG00000015415) Gpd1l (ENSMAUG00000020651) Osbpl10 (ENSMAUG00000012681) Stt3b (ENSMAUG00000011786) Chinese hamster chok1gshd MODERN SPECIES 284 Als2cl (ENSCGRG00001017326) Tdgf1 (ENSCGRG00001010294) Lrrc2 (ENSCGRG00001000643) ENSCGRG00001014656 Ltf (ENSCGRG00001023833) Ccrl2 (ENSCGRG00001011599) ##29 Lrrfip2 (ENSCGRG00001011695) Mlh1 (ENSCGRG00001022452) Epm2aip1 (ENSCGRG00001004981) Trank1 (ENSCGRG00001009923) Dclk3 (ENSCGRG00001023842) Stac (ENSCGRG00001016769) Arpp21 (ENSCGRG00001012175) #18 Pdcd6ip (ENSCGRG00001013319) Clasp2 (ENSCGRG00001014776) #21 Ubp1 (ENSCGRG00001015379) #22 Fbxl2 (ENSCGRG00001020190) #24 Susd5 (ENSCGRG00001014192) #26 Crtap (ENSCGRG00001010658) #27 Glb1 (ENSCGRG00001017634) #28 Ccr4 (ENSCGRG00001008115) #29 Trim71 (ENSCGRG00001025008) #30 Cnot10 (ENSCGRG00001023474) #31 Dync1li1 (ENSCGRG00001019361) #34 Cmtm6 (ENSCGRG00001017495) #36 Cmtm7 (ENSCGRG00001017140) #37 Cmtm8 (ENSCGRG00001021252) Gpd1l (ENSCGRG00001016133) Osbpl10 (ENSCGRG00001006361) Stt3b (ENSCGRG00001022574) Gadl1 (ENSCGRG00001015920) Murinae ANCESTRAL SPECIES 3 ENSGT00940000159076 ENSGT00940000154960 ENSGT00940000162454 ENSGT00960000189448 ENSGT00940000156055 ENSGT01020000230359.C.a.a.b ##29 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263856 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.r ENSGT00940000157880 ENSGT00940000155488 Mus ANCESTRAL SPECIES 4 ENSGT00940000159076 ENSGT00940000154960 ENSGT00940000162454 ENSGT00960000189448 ENSGT00940000156055 ENSGT01020000230359.C.a.a.b ##29 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263856 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT00390000010260 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.r ENSGT00940000157880 ENSGT00940000155488 Mus_A ANCESTRAL SPECIES 4 ENSGT00940000159076 ENSGT00940000154960 ENSGT00940000162454 ENSGT00960000189448 ENSGT00940000156055 ENSGT01020000230359.C.a.a.b ##29 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263856 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT00390000010260 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.r ENSGT00940000157880 ENSGT00940000155488 Mus_B ANCESTRAL SPECIES 3 ENSGT00940000159076 ENSGT00940000154960 ENSGT00940000162454 ENSGT00960000189448 ENSGT00940000156055 ENSGT01020000230359.C.a.a.b ##29 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263856 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT00390000010260 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.r ENSGT00940000157880 ENSGT00940000155488 Mus_C ANCESTRAL SPECIES 23 ENSGT00940000159076 ENSGT00940000154960 ENSGT00940000162454 ENSGT00960000189448 ENSGT00940000156055 ENSGT01020000230359.C.a.a.b ##29 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263856 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT00390000010260 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.r ENSGT00940000157880 ENSGT00940000155488 spretus MODERN SPECIES 18 Fam240a (MGP_SPRETEiJ_G0033896) Tdgf1 (MGP_SPRETEiJ_G0033897) Lrrc2 (MGP_SPRETEiJ_G0033898) MGP_SPRETEiJ_G0033899 Ltf (MGP_SPRETEiJ_G0033900) Ccrl2 (MGP_SPRETEiJ_G0033901) ##29 MGP_SPRETEiJ_G0033902 Mlh1 (MGP_SPRETEiJ_G0033903) Epm2aip1 (MGP_SPRETEiJ_G0033904) Trank1 (MGP_SPRETEiJ_G0033905) Dclk3 (MGP_SPRETEiJ_G0033906) Stac (MGP_SPRETEiJ_G0033907) Arpp21 (MGP_SPRETEiJ_G0033908) #18 Pdcd6ip (MGP_SPRETEiJ_G0033909) Clasp2 (MGP_SPRETEiJ_G0033910) #21 Ubp1 (MGP_SPRETEiJ_G0033911) #22 Fbxl2 (MGP_SPRETEiJ_G0033912) #24 Susd5 (MGP_SPRETEiJ_G0033913) #26 Crtap (MGP_SPRETEiJ_G0033914) #27 Glb1 (MGP_SPRETEiJ_G0033915) #28 Tmppe (MGP_SPRETEiJ_G0033916) Ccr4 (MGP_SPRETEiJ_G0033917) #29 Trim71 (MGP_SPRETEiJ_G0033918) #30 MGP_SPRETEiJ_G0033919 Cnot10 (MGP_SPRETEiJ_G0033920) #31 Dync1li1 (MGP_SPRETEiJ_G0033921) #34 Cmtm6 (MGP_SPRETEiJ_G0033922) #36 Cmtm7 (MGP_SPRETEiJ_G0033923) #37 Cmtm8 (MGP_SPRETEiJ_G0033924) Gpd1l (MGP_SPRETEiJ_G0033925) Osbpl10 (MGP_SPRETEiJ_G0033926) Steppe mouse MODERN SPECIES 3088 Arpp21 (ENSMSIG00000028251) #18 Pdcd6ip (ENSMSIG00000028422) Clasp2 (ENSMSIG00000028452) #21 Ubp1 (ENSMSIG00000028689) #22 Fbxl2 (ENSMSIG00000028716) #24 Susd5 (ENSMSIG00000028735) #26 Mouse MODERN SPECIES 18 Fam240a (ENSMUSG00000096393) Tdgf1 (ENSMUSG00000032494) Lrrc2 (ENSMUSG00000032495) Rtp3 (ENSMUSG00000066319) Ltf (ENSMUSG00000032496) Ccrl2 (ENSMUSG00000043953) ##29 Lrrfip2 (ENSMUSG00000032497) Mlh1 (ENSMUSG00000032498) Epm2aip1 (ENSMUSG00000046785) Trank1 (ENSMUSG00000062296) Dclk3 (ENSMUSG00000032500) Stac (ENSMUSG00000032502) Arpp21 (ENSMUSG00000032503) #18 Pdcd6ip (ENSMUSG00000032504) Clasp2 (ENSMUSG00000033392) #21 Ubp1 (ENSMUSG00000009741) #22 Fbxl2 (ENSMUSG00000032507) #24 Susd5 (ENSMUSG00000086596) #26 Bcl2a1c (ENSMUSG00000053820) Crtap (ENSMUSG00000032431) #27 Glb1 (ENSMUSG00000045594) #28 Tmppe (ENSMUSG00000079260) Ccr4 (ENSMUSG00000047898) #29 Trim71 (ENSMUSG00000079259) #30 Cnot10 (ENSMUSG00000056167) #31 Dync1li1 (ENSMUSG00000032435) #34 Cmtm6 (ENSMUSG00000032434) #36 Cmtm7 (ENSMUSG00000032436) #37 Cmtm8 (ENSMUSG00000041012) Gpd1l (ENSMUSG00000050627) Osbpl10 (ENSMUSG00000040875) Ryukyu mouse MODERN SPECIES 18 MGP_CAROLIEiJ_G0032749 Lrrc2 (MGP_CAROLIEiJ_G0032750) MGP_CAROLIEiJ_G0032751 Ltf (MGP_CAROLIEiJ_G0032752) Ccrl2 (MGP_CAROLIEiJ_G0032753) ##29 Lrrfip2 (MGP_CAROLIEiJ_G0032754) Mlh1 (MGP_CAROLIEiJ_G0032755) Epm2aip1 (MGP_CAROLIEiJ_G0032756) Trank1 (MGP_CAROLIEiJ_G0032757) Dclk3 (MGP_CAROLIEiJ_G0032758) Stac (MGP_CAROLIEiJ_G0032759) Arpp21 (MGP_CAROLIEiJ_G0032760) #18 Pdcd6ip (MGP_CAROLIEiJ_G0032762) MGP_CAROLIEiJ_G0032763 #21 Clasp2 (MGP_CAROLIEiJ_G0032764) #21 Ubp1 (MGP_CAROLIEiJ_G0032765) #22 MGP_CAROLIEiJ_G0032766 Susd5 (MGP_CAROLIEiJ_G0032767) #26 Glb1 (MGP_CAROLIEiJ_G0032768) #28 Tmppe (MGP_CAROLIEiJ_G0032769) Ccr4 (MGP_CAROLIEiJ_G0032770) #29 Trim71 (MGP_CAROLIEiJ_G0032771) #30 MGP_CAROLIEiJ_G0032772 Cnot10 (MGP_CAROLIEiJ_G0032773) #31 Dync1li1 (MGP_CAROLIEiJ_G0032774) #34 Cmtm6 (MGP_CAROLIEiJ_G0032775) #36 Cmtm7 (MGP_CAROLIEiJ_G0032776) #37 Cmtm8 (MGP_CAROLIEiJ_G0032777) Gpd1l (MGP_CAROLIEiJ_G0032778) Osbpl10 (MGP_CAROLIEiJ_G0032779) Stt3b (MGP_CAROLIEiJ_G0032780) Shrew mouse MODERN SPECIES 1 MGP_PahariEiJ_G0015616 Lrrc2 (MGP_PahariEiJ_G0015617) MGP_PahariEiJ_G0015618 Ltf (MGP_PahariEiJ_G0015619) Ccrl2 (MGP_PahariEiJ_G0015620) ##29 MGP_PahariEiJ_G0015621 Mlh1 (MGP_PahariEiJ_G0015622) Epm2aip1 (MGP_PahariEiJ_G0015623) Trank1 (MGP_PahariEiJ_G0015624) Dclk3 (MGP_PahariEiJ_G0015625) Stac (MGP_PahariEiJ_G0015626) Arpp21 (MGP_PahariEiJ_G0015627) #18 Pdcd6ip (MGP_PahariEiJ_G0015628) MGP_PahariEiJ_G0015629 #21 Clasp2 (MGP_PahariEiJ_G0015630) #21 Ubp1 (MGP_PahariEiJ_G0015631) #22 MGP_PahariEiJ_G0015632 Susd5 (MGP_PahariEiJ_G0015633) #26 Crtap (MGP_PahariEiJ_G0015634) #27 Glb1 (MGP_PahariEiJ_G0015635) #28 Tmppe (MGP_PahariEiJ_G0015636) Ccr4 (MGP_PahariEiJ_G0015637) #29 Trim71 (MGP_PahariEiJ_G0015638) #30 MGP_PahariEiJ_G0015639 Cnot10 (MGP_PahariEiJ_G0015640) #31 Dync1li1 (MGP_PahariEiJ_G0015641) #34 Cmtm6 (MGP_PahariEiJ_G0015642) #36 Cmtm7 (MGP_PahariEiJ_G0015643) #37 Cmtm8 (MGP_PahariEiJ_G0015644) Gpd1l (MGP_PahariEiJ_G0015645) Osbpl10 (MGP_PahariEiJ_G0015646) Rat MODERN SPECIES 18 Lrrc2 (ENSRNOG00000030688) Rtp3 (ENSRNOG00000037167) AC132539.3 (ENSRNOG00000052063) RGD1565653 (ENSRNOG00000062517) Ltf (ENSRNOG00000031779) Ccrl2 (ENSRNOG00000033234) ##29 Lrrfip2 (ENSRNOG00000021047) Mlh1 (ENSRNOG00000033809) Epm2aip1 (ENSRNOG00000043006) Trank1 (ENSRNOG00000021091) Dclk3 (ENSRNOG00000033026) Stac (ENSRNOG00000008865) Arpp21 (ENSRNOG00000008919) #18 Pdcd6ip (ENSRNOG00000008981) Clasp2 (ENSRNOG00000009161) #21 Ubp1 (ENSRNOG00000009729) #22 Fbxl2 (ENSRNOG00000027099) #24 ENSRNOG00000070154 Susd5 (ENSRNOG00000026951) #26 Crtap (ENSRNOG00000009878) #27 Tmppe (ENSRNOG00000066638) Glb1 (ENSRNOG00000010196) #28 Ccr4 (ENSRNOG00000010315) #29 Trim71 (ENSRNOG00000030098) #30 Cnot10 (ENSRNOG00000052305) #31 Dync1li1 (ENSRNOG00000010434) #34 Cmtm6 (ENSRNOG00000010951) #36 Cmtm7 (ENSRNOG00000067317) #37 Cmtm8 (ENSRNOG00000011201) Gpd1l (ENSRNOG00000026455) Osbpl10 (ENSRNOG00000011435) Upper Galilee mountains blind mole rat MODERN SPECIES 848 Pdcd6ip (ENSNGAG00000016325) Clasp2 (ENSNGAG00000007415) #21 Ubp1 (ENSNGAG00000014497) #22 ENSNGAG00000007776 Fbxl2 (ENSNGAG00000009887) #24 Susd5 (ENSNGAG00000012507) #26 Crtap (ENSNGAG00000016860) #27 Glb1 (ENSNGAG00000003047) #28 ENSNGAG00000016708 #29 Trim71 (ENSNGAG00000012009) #30 ENSNGAG00000012298 Lesser Egyptian jerboa MODERN SPECIES 88 Prss45 (ENSJJAG00000019524) Prss46 (ENSJJAG00000021613) Als2cl (ENSJJAG00000017612) ENSJJAG00000023493 Lrrc2 (ENSJJAG00000012595) ENSJJAG00000014774 ENSJJAG00000015022 Lrrfip2 (ENSJJAG00000014566) Mlh1 (ENSJJAG00000021943) Epm2aip1 (ENSJJAG00000001100) Trank1 (ENSJJAG00000011092) Dclk3 (ENSJJAG00000021037) Stac (ENSJJAG00000016973) Arpp21 (ENSJJAG00000018847) #18 Clasp2 (ENSJJAG00000024139) #21 Ubp1 (ENSJJAG00000022432) #22 Susd5 (ENSJJAG00000000932) #26 Crtap (ENSJJAG00000011891) #27 ENSJJAG00000019480 #28 Ccr4 (ENSJJAG00000004992) #29 Trim71 (ENSJJAG00000021157) #30 Cnot10 (ENSJJAG00000006665) #31 ENSJJAG00000012341 #34 Cmtm6 (ENSJJAG00000000180) #36 Cmtm7 (ENSJJAG00000007568) #37 ENSJJAG00000013711 Cmtm8 (ENSJJAG00000024299) Gpd1l (ENSJJAG00000010383) Osbpl10 (ENSJJAG00000018740) Stt3b (ENSJJAG00000012543) Gadl1 (ENSJJAG00000023705) Kangaroo rat MODERN SPECIES 429 ENSDORG00000013384 ENSDORG00000025886 Clasp2 (ENSDORG00000002383) #21 Ubp1 (ENSDORG00000010133) #22 ENSDORG00000028109 #24 Susd5 (ENSDORG00000000628) #26 Crtap (ENSDORG00000000624) #27 Glb1 (ENSDORG00000008899) #28 Ccr4 (ENSDORG00000005598) #29 Trim71 (ENSDORG00000013611) #30 Cnot10 (ENSDORG00000006397) #31 Dync1li1 (ENSDORG00000009390) #34 Cmtm6 (ENSDORG00000024910) #36 Cmtm7 (ENSDORG00000027216) #37 Cmtm8 (ENSDORG00000010651) ENSDORG00000024831 ENSDORG00000016533 Osbpl10 (ENSDORG00000001615) Stt3b (ENSDORG00000009579) Lagomorpha ANCESTRAL SPECIES 6 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 Rabbit MODERN SPECIES 5 LRRFIP2 (ENSOCUG00000003169) MLH1 (ENSOCUG00000002240) EPM2AIP1 (ENSOCUG00000027586) TRANK1 (ENSOCUG00000003819) DCLK3 (ENSOCUG00000003654) STAC (ENSOCUG00000014571) ENSOCUG00000031463 ENSOCUG00000039299 ENSOCUG00000036808 ARPP21 (ENSOCUG00000009828) #18 ENSOCUG00000033149 ENSOCUG00000017800 ENSOCUG00000035903 CLASP2 (ENSOCUG00000000996) #21 ENSOCUG00000037306 UBP1 (ENSOCUG00000011063) #22 FBXL2 (ENSOCUG00000034278) #24 SUSD5 (ENSOCUG00000015507) #26 CRTAP (ENSOCUG00000007741) #27 GLB1 (ENSOCUG00000005824) #28 TRIM71 (ENSOCUG00000007612) #30 CNOT10 (ENSOCUG00000011431) #31 DYNC1LI1 (ENSOCUG00000009535) #34 ENSOCUG00000000764 #36 CMTM7 (ENSOCUG00000014724) #37 CMTM8 (ENSOCUG00000035377) ENSOCUG00000010093 ENSOCUG00000021645 OSBPL10 (ENSOCUG00000011925) STT3B (ENSOCUG00000011918) ENSOCUG00000036923 Pika MODERN SPECIES 2311 ENSOPRG00000013003 CLASP2 (ENSOPRG00000012935) #21 UBP1 (ENSOPRG00000012913) #22 FBXL2 (ENSOPRG00000012890) #24 Tree shrew MODERN SPECIES 2632 CLASP2 (ENSTBEG00000005366) #21 UBP1 (ENSTBEG00000005025) #22 FBXL2 (ENSTBEG00000004746) #24 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263710 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000179751 ENSGT00940000157880 Eulipotyphla ANCESTRAL SPECIES 1144 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 Hedgehog MODERN SPECIES 4841 UBP1 (ENSEEUG00000001358) #22 FBXL2 (ENSEEUG00000001339) #24 Common shrew MODERN SPECIES 3747 UBP1 (ENSSARG00000008670) #22 FBXL2 (ENSSARG00000008640) #24 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263710 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000179751 ENSGT00940000157880 Artiodactyla ANCESTRAL SPECIES 2 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 ENSGT00940000155488 Suina ANCESTRAL SPECIES 1 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264025 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 ENSGT00940000155488 Pig MODERN SPECIES 4 ITGA9 (ENSSSCG00000011245) ENSSSCG00000011243 ENSSSCG00000062556 ENSSSCG00000037246 DCLK3 (ENSSSCG00000011241) ENSSSCG00000054588 TRANK1 (ENSSSCG00000011239) EPM2AIP1 (ENSSSCG00000030247) ENSSSCG00000025502 MLH1 (ENSSSCG00000024222) LRRFIP2 (ENSSSCG00000027738) STAC (ENSSSCG00000048318) ARPP21 (ENSSSCG00000011238) #18 ENSSSCG00000011237 CLASP2 (ENSSSCG00000011236) #21 UBP1 (ENSSSCG00000011235) #22 FBXL2 (ENSSSCG00000039802) #24 SUSD5 (ENSSSCG00000039358) #26 CRTAP (ENSSSCG00000051838) #27 TMPPE (ENSSSCG00000037371) GLB1 (ENSSSCG00000024119) #28 CCR4 (ENSSSCG00000034660) #29 TRIM71 (ENSSSCG00000036996) #30 CNOT10 (ENSSSCG00000032220) #31 DYNC1LI1 (ENSSSCG00000011233) #34 ENSSSCG00000038362 #36 CMTM7 (ENSSSCG00000011234) #37 ENSSSCG00000024546 CMTM8 (ENSSSCG00000022618) GPD1L (ENSSSCG00000021977) ENSSSCG00000041659 Chacoan peccary MODERN SPECIES 950 DLEC1 (ENSCWAG00000021032) PLCD1 (ENSCWAG00000020985) VILL (ENSCWAG00000020946) CTDSPL (ENSCWAG00000020887) ITGA9 (ENSCWAG00000020817) GOLGA4 (ENSCWAG00000020789) DCLK3 (ENSCWAG00000020770) TRANK1 (ENSCWAG00000020657) EPM2AIP1 (ENSCWAG00000020633) MLH1 (ENSCWAG00000020596) LRRFIP2 (ENSCWAG00000020544) STAC (ENSCWAG00000020504) ARPP21 (ENSCWAG00000020389) #18 ENSCWAG00000020346 CLASP2 (ENSCWAG00000020062) #21 UBP1 (ENSCWAG00000019946) #22 FBXL2 (ENSCWAG00000019861) #24 SUSD5 (ENSCWAG00000019828) #26 CRTAP (ENSCWAG00000019806) #27 GLB1 (ENSCWAG00000019780) #28 CCR4 (ENSCWAG00000019769) #29 TRIM71 (ENSCWAG00000019745) #30 CNOT10 (ENSCWAG00000019594) #31 DYNC1LI1 (ENSCWAG00000019528) #34 CMTM6 (ENSCWAG00000019493) #36 CMTM7 (ENSCWAG00000019463) #37 CMTM8 (ENSCWAG00000019411) ENSCWAG00000019386 OSBPL10 (ENSCWAG00000019293) STT3B (ENSCWAG00000019147) GADL1 (ENSCWAG00000019018) Artiodactyla_a ANCESTRAL SPECIES 18 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 ENSGT00940000155488 Artiodactyla_b ANCESTRAL SPECIES 28 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 ENSGT00940000155488 Cetacea ANCESTRAL SPECIES 7 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000155389.p ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263710 ENSGT01100000263628.c #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 ENSGT00940000155488 Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000155389.p ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263710 ENSGT01100000263628.c #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 ENSGT00940000155488 Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000155389.p ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263710 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 ENSGT00940000155488 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000155389.p ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263710 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 Monodontidae ANCESTRAL SPECIES 4 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000155389.p ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000171382 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01010000224016 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 ENSGT00940000155488 Narwhal MODERN SPECIES 310 PLCD1 (ENSMMNG00015017400) VILL (ENSMMNG00015017280) CTDSPL (ENSMMNG00015017177) ITGA9 (ENSMMNG00015017083) GOLGA4 (ENSMMNG00015016938) DCLK3 (ENSMMNG00015016864) ENSMMNG00015016829 TRANK1 (ENSMMNG00015016747) EPM2AIP1 (ENSMMNG00015016713) MLH1 (ENSMMNG00015016620) LRRFIP2 (ENSMMNG00015016562) STAC (ENSMMNG00015016495) ARPP21 (ENSMMNG00015016400) #18 ENSMMNG00015016299 CLASP2 (ENSMMNG00015015887) #21 UBP1 (ENSMMNG00015015602) #22 FBXL2 (ENSMMNG00015015549) #24 SUSD5 (ENSMMNG00015015526) #26 CRTAP (ENSMMNG00015015511) #27 GLB1 (ENSMMNG00015015479) #28 CCR4 (ENSMMNG00015015464) #29 ENSMMNG00015015457 TRIM71 (ENSMMNG00015015445) #30 CNOT10 (ENSMMNG00015015402) #31 ENSMMNG00015015357 DYNC1LI1 (ENSMMNG00015015336) #34 CMTM6 (ENSMMNG00015015309) #36 CMTM7 (ENSMMNG00015015292) #37 CMTM8 (ENSMMNG00015015271) ENSMMNG00015015233 OSBPL10 (ENSMMNG00015015190) Beluga whale MODERN SPECIES 56 DLEC1 (ENSDLEG00000013438) PLCD1 (ENSDLEG00000013512) VILL (ENSDLEG00000013632) CTDSPL (ENSDLEG00000014030) ITGA9 (ENSDLEG00000014064) GOLGA4 (ENSDLEG00000008344) DCLK3 (ENSDLEG00000008606) TRANK1 (ENSDLEG00000008707) EPM2AIP1 (ENSDLEG00000009081) MLH1 (ENSDLEG00000009212) LRRFIP2 (ENSDLEG00000010265) STAC (ENSDLEG00000010955) ARPP21 (ENSDLEG00000011001) #18 PDCD6IP (ENSDLEG00000011121) CLASP2 (ENSDLEG00000011627) #21 UBP1 (ENSDLEG00000016699) #22 FBXL2 (ENSDLEG00000016773) #24 SUSD5 (ENSDLEG00000017040) #26 CRTAP (ENSDLEG00000017068) #27 GLB1 (ENSDLEG00000017090) #28 CCR4 (ENSDLEG00000017153) #29 ENSDLEG00000017162 TRIM71 (ENSDLEG00000017175) #30 CNOT10 (ENSDLEG00000017186) #31 ENSDLEG00000017219 DYNC1LI1 (ENSDLEG00000017231) #34 CMTM6 (ENSDLEG00000017251) #36 CMTM7 (ENSDLEG00000017265) #37 CMTM8 (ENSDLEG00000017292) GPD1L (ENSDLEG00000017317) OSBPL10 (ENSDLEG00000017358) Vaquita MODERN SPECIES 2 PLCD1 (ENSPSNG00000019020) VILL (ENSPSNG00000019145) CTDSPL (ENSPSNG00000019319) ITGA9 (ENSPSNG00000019404) GOLGA4 (ENSPSNG00000019775) DCLK3 (ENSPSNG00000020008) ENSPSNG00000020064 TRANK1 (ENSPSNG00000020164) EPM2AIP1 (ENSPSNG00000020375) MLH1 (ENSPSNG00000020426) LRRFIP2 (ENSPSNG00000020625) STAC (ENSPSNG00000020796) ARPP21 (ENSPSNG00000020983) #18 ENSPSNG00000007756 CLASP2 (ENSPSNG00000007999) #21 UBP1 (ENSPSNG00000008768) #22 FBXL2 (ENSPSNG00000008864) #24 SUSD5 (ENSPSNG00000008939) #26 CRTAP (ENSPSNG00000009008) #27 GLB1 (ENSPSNG00000009100) #28 CCR4 (ENSPSNG00000009160) #29 ENSPSNG00000009198 TRIM71 (ENSPSNG00000009274) #30 ENSPSNG00000009332 CNOT10 (ENSPSNG00000009474) #31 ENSPSNG00000009723 ENSPSNG00000009741 DYNC1LI1 (ENSPSNG00000009811) #34 CMTM6 (ENSPSNG00000009997) #36 CMTM7 (ENSPSNG00000010060) #37 CMTM8 (ENSPSNG00000010152) Dolphin MODERN SPECIES 2273 CLASP2 (ENSTTRG00000016793) #21 UBP1 (ENSTTRG00000016791) #22 FBXL2 (ENSTTRG00000016788) #24 SUSD5 (ENSTTRG00000016786) #26 CRTAP (ENSTTRG00000016785) #27 TMPPE (ENSTTRG00000016784) GLB1 (ENSTTRG00000016782) #28 CCR4 (ENSTTRG00000016781) #29 TRIM71 (ENSTTRG00000016780) #30 CNOT10 (ENSTTRG00000016779) #31 Sperm whale MODERN SPECIES 9 PLCD1 (ENSPCTG00005004424) VILL (ENSPCTG00005004487) ENSPCTG00005004550 ITGA9 (ENSPCTG00005004587) GOLGA4 (ENSPCTG00005004721) DCLK3 (ENSPCTG00005005021) TRANK1 (ENSPCTG00005005161) EPM2AIP1 (ENSPCTG00005005689) MLH1 (ENSPCTG00005005703) LRRFIP2 (ENSPCTG00005005826) STAC (ENSPCTG00005006229) ARPP21 (ENSPCTG00005006362) #18 ENSPCTG00005006439 PDCD6IP (ENSPCTG00005006462) #19 CLASP2 (ENSPCTG00005006862) #21 UBP1 (ENSPCTG00005008528) #22 FBXL2 (ENSPCTG00005008670) #24 SUSD5 (ENSPCTG00005008797) #26 CRTAP (ENSPCTG00005008849) #27 GLB1 (ENSPCTG00005008944) #28 CCR4 (ENSPCTG00005009192) #29 TRIM71 (ENSPCTG00005009209) #30 CNOT10 (ENSPCTG00005009286) #31 DYNC1LI1 (ENSPCTG00005009587) #34 CMTM6 (ENSPCTG00005009642) #36 CMTM7 (ENSPCTG00005009691) #37 CMTM8 (ENSPCTG00005009769) GPD1L (ENSPCTG00005009885) OSBPL10 (ENSPCTG00005009958) STT3B (ENSPCTG00005010073) GADL1 (ENSPCTG00005010232) Blue whale MODERN SPECIES 2 ENSBMSG00010022531 ENSBMSG00010022530 ENSBMSG00010022529 DCLK3 (ENSBMSG00010022528) ENSBMSG00010022527 TRANK1 (ENSBMSG00010022526) EPM2AIP1 (ENSBMSG00010022525) MLH1 (ENSBMSG00010022524) LRRFIP2 (ENSBMSG00010022523) STAC (ENSBMSG00010022522) ARPP21 (ENSBMSG00010022519) #18 ENSBMSG00010022517 ENSBMSG00010022515 ENSBMSG00010022514 #19 CLASP2 (ENSBMSG00010013160) #21 UBP1 (ENSBMSG00010011409) #22 FBXL2 (ENSBMSG00010011377) #24 SUSD5 (ENSBMSG00010011358) #26 CRTAP (ENSBMSG00010011339) #27 GLB1 (ENSBMSG00010011320) #28 CCR4 (ENSBMSG00010011298) #29 TRIM71 (ENSBMSG00010011287) #30 CNOT10 (ENSBMSG00010011215) #31 DYNC1LI1 (ENSBMSG00010011149) #34 CMTM6 (ENSBMSG00010011130) #36 CMTM7 (ENSBMSG00010011112) #37 CMTM8 (ENSBMSG00010011090) ENSBMSG00010011063 ENSBMSG00010011049 ENSBMSG00010011037 OSBPL10 (ENSBMSG00010011024) Pecora ANCESTRAL SPECIES 17 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 Percora_a ANCESTRAL SPECIES 19 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 Bovidae ANCESTRAL SPECIES 19 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 Bovinae ANCESTRAL SPECIES 16 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a.k.a #27 ENSGT00940000154632.eb ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00950000182922.a.b.e.b.a ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 American bison MODERN SPECIES 2981 PLCD1 (ENSBBBG00000019979) VILL (ENSBBBG00000005122) CTDSPL (ENSBBBG00000019925) ITGA9 (ENSBBBG00000005380) ENSBBBG00000019844 GOLGA4 (ENSBBBG00000019820) DCLK3 (ENSBBBG00000005168) TRANK1 (ENSBBBG00000019712) EPM2AIP1 (ENSBBBG00000019649) MLH1 (ENSBBBG00000019630) LRRFIP2 (ENSBBBG00000019541) STAC (ENSBBBG00000008362) ARPP21 (ENSBBBG00000019342) #18 PDCD6IP (ENSBBBG00000009074) #19 CLASP2 (ENSBBBG00000019178) #21 ENSBBBG00000018645 #22 FBXL2 (ENSBBBG00000004629) #24 SUSD5 (ENSBBBG00000018613) #26 ENSBBBG00000004605 #27 ENSBBBG00000007097 GLB1 (ENSBBBG00000018565) #28 CCR4 (ENSBBBG00000004569) #29 TRIM71 (ENSBBBG00000018536) #30 CNOT10 (ENSBBBG00000018519) #31 ENSBBBG00000018446 DYNC1LI1 (ENSBBBG00000018433) #34 CMTM6 (ENSBBBG00000004498) #36 CMTM7 (ENSBBBG00000018392) #37 CMTM8 (ENSBBBG00000018364) ENSBBBG00000018344 OSBPL10 (ENSBBBG00000007583) Bos ANCESTRAL SPECIES 16 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264025 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a.k.a #27 ENSGT00940000154632.eb ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00950000182922.a.b.e.b.a ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT01100000263481.n.a.b.a.b.a.a.b.b.a ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b Bos_a ANCESTRAL SPECIES 9 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264025 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a.k.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00950000182922.a.a.a.b.a.a.a ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT01100000263481.n.a.b.a.b.a.a.b.b.a ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 Wild yak MODERN SPECIES 962 CLASP2 (ENSBMUG00000009088) #21 UBP1 (ENSBMUG00000008956) #22 FBXL2 (ENSBMUG00000008901) #24 SUSD5 (ENSBMUG00000008862) #26 CRTAP (ENSBMUG00000008845) #27 ENSBMUG00000008807 GLB1 (ENSBMUG00000008798) #28 CCR4 (ENSBMUG00000008779) #29 TRIM71 (ENSBMUG00000008767) #30 CNOT10 (ENSBMUG00000008749) #31 ENSBMUG00000008677 DYNC1LI1 (ENSBMUG00000008669) #34 CMTM6 (ENSBMUG00000008652) #36 Domestic yak MODERN SPECIES 14 VILL (ENSBGRG00000013769) ENSBGRG00000014207 ITGA9 (ENSBGRG00000014471) ENSBGRG00000014575 ENSBGRG00000014786 DCLK3 (ENSBGRG00000014862) TRANK1 (ENSBGRG00000014964) EPM2AIP1 (ENSBGRG00000015283) MLH1 (ENSBGRG00000015448) LRRFIP2 (ENSBGRG00000016218) STAC (ENSBGRG00000017416) ARPP21 (ENSBGRG00000017571) #18 ENSBGRG00000017977 ENSBGRG00000018051 CLASP2 (ENSBGRG00000018586) #21 UBP1 (ENSBGRG00000022018) #22 FBXL2 (ENSBGRG00000022197) #24 SUSD5 (ENSBGRG00000022405) #26 ENSBGRG00000022474 #27 GLB1 (ENSBGRG00000022675) #28 CCR4 (ENSBGRG00000022769) #29 TRIM71 (ENSBGRG00000022800) #30 CNOT10 (ENSBGRG00000022883) #31 ENSBGRG00000023667 ENSBGRG00000023685 #34 CMTM6 (ENSBGRG00000023747) #36 ENSBGRG00000023786 CMTM7 (ENSBGRG00000023835) #37 CMTM8 (ENSBGRG00000023917) ENSBGRG00000024032 OSBPL10 (ENSBGRG00000024228) Bos_b ANCESTRAL SPECIES 17 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264025 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a.k.a #27 ENSGT00940000154632.eb ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00950000182922.a.b.e.b.a ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT01100000263481.n.a.b.a.b.a.a.b.b.a ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b Cow MODERN SPECIES 14 PLCD1 (ENSBTAG00000037726) VILL (ENSBTAG00000012963) CTDSPL (ENSBTAG00000053223) ITGA9 (ENSBTAG00000016566) GOLGA4 (ENSBTAG00000016563) DCLK3 (ENSBTAG00000039727) TRANK1 (ENSBTAG00000021452) EPM2AIP1 (ENSBTAG00000022733) MLH1 (ENSBTAG00000016758) LRRFIP2 (ENSBTAG00000016760) STAC (ENSBTAG00000006735) ARPP21 (ENSBTAG00000007732) #18 ENSBTAG00000051119 PDCD6IP (ENSBTAG00000017426) #19 CLASP2 (ENSBTAG00000011333) #21 UBP1 (ENSBTAG00000003968) #22 FBXL2 (ENSBTAG00000003952) #24 SUSD5 (ENSBTAG00000005327) #26 CRTAP (ENSBTAG00000021442) #27 ENSBTAG00000034871 GLB1 (ENSBTAG00000015254) #28 CCR4 (ENSBTAG00000034883) #29 TRIM71 (ENSBTAG00000022744) #30 CNOT10 (ENSBTAG00000004834) #31 ENSBTAG00000054555 DYNC1LI1 (ENSBTAG00000014700) #34 CMTM6 (ENSBTAG00000019526) #36 ENSBTAG00000050895 CMTM7 (ENSBTAG00000001712) #37 CMTM8 (ENSBTAG00000001710) GPD1L (ENSBTAG00000009826) Hybrid Bos Indicus MODERN SPECIES 14 VILL (ENSBIXG00005007732) CTDSPL (ENSBIXG00005022263) ENSBIXG00005022220 ITGA9 (ENSBIXG00005022194) ENSBIXG00005022114 GOLGA4 (ENSBIXG00005003744) DCLK3 (ENSBIXG00005003708) TRANK1 (ENSBIXG00005021927) EPM2AIP1 (ENSBIXG00005021436) MLH1 (ENSBIXG00005021401) LRRFIP2 (ENSBIXG00005021264) STAC (ENSBIXG00005003549) ARPP21 (ENSBIXG00005003532) #18 ENSBIXG00005020652 CLASP2 (ENSBIXG00005020449) #21 UBP1 (ENSBIXG00005003021) #22 FBXL2 (ENSBIXG00005018561) #24 SUSD5 (ENSBIXG00005007654) #26 ENSBIXG00005018483 #27 ENSBIXG00005018448 GLB1 (ENSBIXG00005018417) #28 CCR4 (ENSBIXG00005002980) #29 TRIM71 (ENSBIXG00005018379) #30 CNOT10 (ENSBIXG00005018346) #31 ENSBIXG00005018213 DYNC1LI1 (ENSBIXG00005018184) #34 CMTM6 (ENSBIXG00005018160) #36 ENSBIXG00005018124 ENSBIXG00005018096 OSBPL10 (ENSBIXG00005018070) STT3B (ENSBIXG00005018011) Caprinae ANCESTRAL SPECIES 15 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.w.b ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 10 PLCD1 (ENSOARG00020025854) VILL (ENSOARG00020025822) CTDSPL (ENSOARG00020025807) ITGA9 (ENSOARG00020025800) GOLGA4 (ENSOARG00020025783) DCLK3 (ENSOARG00020025768) TRANK1 (ENSOARG00020025761) EPM2AIP1 (ENSOARG00020025757) ENSOARG00020025756 MLH1 (ENSOARG00020025753) LRRFIP2 (ENSOARG00020025704) STAC (ENSOARG00020025681) ARPP21 (ENSOARG00020025663) #18 PDCD6IP (ENSOARG00020025655) #19 CLASP2 (ENSOARG00020025138) #21 ENSOARG00020024961 #22 FBXL2 (ENSOARG00020024907) #24 CRTAP (ENSOARG00020024874) #27 ENSOARG00020024863 CCR4 (ENSOARG00020024855) #29 ENSOARG00020024808 #28 TRIM71 (ENSOARG00020024789) #30 CNOT10 (ENSOARG00020024662) #31 DYNC1LI1 (ENSOARG00020024520) #34 CMTM6 (ENSOARG00020024489) #36 ENSOARG00020024478 CMTM7 (ENSOARG00020024446) #37 ENSOARG00020024424 GPD1L (ENSOARG00020024414) STT3B (ENSOARG00020024362) OSBPL10 (ENSOARG00020024245) Rambouillet Sheep MODERN SPECIES 5 ENSOARG00020011200 ENSOARG00020011236 ENSOARG00020011280 ENSOARG00020011304 ENSOARG00020011338 ENSOARG00020011360 ENSOARG00020011481 ENSOARG00020011500 ENSOARG00020011532 ENSOARG00020011565 ENSOARG00020011630 ENSOARG00020011674 ENSOARG00020011733 ENSOARG00020011764 ENSOARG00020011888 ENSOARG00020011955 #22 ENSOARG00020012031 ENSOARG00020012067 ENSOARG00020012875 ENSOARG00020012957 ENSOARG00020013001 ENSOARG00020013034 ENSOARG00020013073 ENSOARG00020013097 ENSOARG00020013141 ENSOARG00020013175 ENSOARG00020013216 ENSOARG00020013367 ENSOARG00020013581 ENSOARG00020013650 ENSOARG00020013696 Goat MODERN SPECIES 14 PLCD1 (ENSCHIG00000012504) VILL (ENSCHIG00000021533) CTDSPL (ENSCHIG00000015918) ENSCHIG00000009750 ITGA9 (ENSCHIG00000021157) GOLGA4 (ENSCHIG00000016192) DCLK3 (ENSCHIG00000020580) TRANK1 (ENSCHIG00000026535) EPM2AIP1 (ENSCHIG00000006585) MLH1 (ENSCHIG00000011953) LRRFIP2 (ENSCHIG00000021299) STAC (ENSCHIG00000025466) ARPP21 (ENSCHIG00000014318) #18 PDCD6IP (ENSCHIG00000027185) #19 CLASP2 (ENSCHIG00000017596) #21 UBP1 (ENSCHIG00000021781) #22 FBXL2 (ENSCHIG00000013784) #24 SUSD5 (ENSCHIG00000008055) #26 CRTAP (ENSCHIG00000020384) #27 GLB1 (ENSCHIG00000014228) #28 CCR4 (ENSCHIG00000020041) #29 TRIM71 (ENSCHIG00000018441) #30 CNOT10 (ENSCHIG00000008987) #31 DYNC1LI1 (ENSCHIG00000024586) #34 CMTM6 (ENSCHIG00000010775) #36 CMTM7 (ENSCHIG00000022116) #37 CMTM8 (ENSCHIG00000015869) ENSCHIG00000011554 OSBPL10 (ENSCHIG00000017764) STT3B (ENSCHIG00000013391) ENSCHIG00000020290 Siberian musk deer MODERN SPECIES 1219 CTDSPL (ENSMMSG00000023890) ITGA9 (ENSMMSG00000023912) ENSMMSG00000023927 ENSMMSG00000023933 GOLGA4 (ENSMMSG00000023943) DCLK3 (ENSMMSG00000023981) TRANK1 (ENSMMSG00000023994) EPM2AIP1 (ENSMMSG00000024012) MLH1 (ENSMMSG00000024032) LRRFIP2 (ENSMMSG00000024059) STAC (ENSMMSG00000024133) ARPP21 (ENSMMSG00000024149) #18 ENSMMSG00000024163 ENSMMSG00000020147 CLASP2 (ENSMMSG00000020282) #21 UBP1 (ENSMMSG00000020917) #22 FBXL2 (ENSMMSG00000021006) #24 SUSD5 (ENSMMSG00000021076) #26 CRTAP (ENSMMSG00000021099) #27 GLB1 (ENSMMSG00000021141) #28 CCR4 (ENSMMSG00000021275) #29 TRIM71 (ENSMMSG00000021287) #30 CNOT10 (ENSMMSG00000021363) #31 DYNC1LI1 (ENSMMSG00000021639) #34 CMTM6 (ENSMMSG00000021664) #36 CMTM7 (ENSMMSG00000021688) #37 CMTM8 (ENSMMSG00000021710) ENSMMSG00000021735 OSBPL10 (ENSMMSG00000021752) ENSMMSG00000021768 Yarkand deer MODERN SPECIES 16 ITGA9 (ENSCHYG00000019698) ENSCHYG00000020164 GOLGA4 (ENSCHYG00000020281) DCLK3 (ENSCHYG00000021985) TRANK1 (ENSCHYG00000022098) EPM2AIP1 (ENSCHYG00000022605) MLH1 (ENSCHYG00000022653) ENSCHYG00000023050 STAC (ENSCHYG00000023619) ARPP21 (ENSCHYG00000023809) #18 ENSCHYG00000024073 ENSCHYG00000024082 ENSCHYG00000024143 CLASP2 (ENSCHYG00000024648) #21 ENSCHYG00000026804 UBP1 (ENSCHYG00000026826) #22 FBXL2 (ENSCHYG00000026868) #24 SUSD5 (ENSCHYG00000026913) #26 CRTAP (ENSCHYG00000026926) #27 ENSCHYG00000026943 #28 CCR4 (ENSCHYG00000026954) #29 TRIM71 (ENSCHYG00000026957) #30 CNOT10 (ENSCHYG00000026965) #31 ENSCHYG00000026992 #34 CMTM6 (ENSCHYG00000027000) #36 CMTM7 (ENSCHYG00000027004) #37 CMTM8 (ENSCHYG00000027008) ENSCHYG00000027011 OSBPL10 (ENSCHYG00000027022) STT3B (ENSCHYG00000027034) GADL1 (ENSCHYG00000027050) Camelidae ANCESTRAL SPECIES 7 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264173 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 Arabian camel MODERN SPECIES 8 PLCD1 (ENSCDRG00005017073) VILL (ENSCDRG00005016992) CTDSPL (ENSCDRG00005016829) ITGA9 (ENSCDRG00005016528) GOLGA4 (ENSCDRG00005015319) LRRFIP2 (ENSCDRG00005014822) MLH1 (ENSCDRG00005014605) EPM2AIP1 (ENSCDRG00005014584) TRANK1 (ENSCDRG00005014501) DCLK3 (ENSCDRG00005014456) STAC (ENSCDRG00005014276) ARPP21 (ENSCDRG00005014003) #18 ENSCDRG00005013888 ENSCDRG00005013481 CLASP2 (ENSCDRG00005012977) #21 UBP1 (ENSCDRG00005012680) #22 FBXL2 (ENSCDRG00005012349) #24 SUSD5 (ENSCDRG00005012294) #26 CRTAP (ENSCDRG00005012207) #27 GLB1 (ENSCDRG00005012114) #28 CCR4 (ENSCDRG00005012095) #29 DYNC1LI1 (ENSCDRG00005012007) #34 CNOT10 (ENSCDRG00005011506) #31 TRIM71 (ENSCDRG00005011456) #30 CMTM6 (ENSCDRG00005011417) #36 CMTM7 (ENSCDRG00005011356) #37 CMTM8 (ENSCDRG00005011245) GPD1L (ENSCDRG00005011126) OSBPL10 (ENSCDRG00005010810) STT3B (ENSCDRG00005010707) GADL1 (ENSCDRG00005010570) Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00390000004487 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000179751 ENSGT00940000157880 Carnivora ANCESTRAL SPECIES 10 ENSGT00940000162289 ENSGT00940000162801 ENSGT00940000163766 ENSGT00940000164428.f.a ENSGT00940000164428.e ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a ENSGT00940000157537 ENSGT00940000176159 ENSGT00940000155365.a.a ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT01100000264173 ENSGT00940000160796 #18 ENSGT00950000183092.b.b ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 Caniformia ANCESTRAL SPECIES ENSGT00950000183148.b.b ENSGT00940000160517 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000003094 ENSGT00940000164428.e ENSGT00940000164428.f.b ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a ENSGT00940000157537 ENSGT00940000176159 ENSGT00940000155365.a.a ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT01100000264173 ENSGT00940000160796 #18 ENSGT00950000183092.b.b ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 Caniformia_b ANCESTRAL SPECIES ENSGT00950000183148.b.b ENSGT00940000160517 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000003094 ENSGT00940000164428.e ENSGT00940000164428.f.b ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a ENSGT00940000157537 ENSGT00940000176159 ENSGT00940000155365.a.a ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT01100000264173 ENSGT00940000160796 #18 ENSGT00950000183092.b.b ENSGT00940000170470 ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 Ursidae ANCESTRAL SPECIES 1 ENSGT00940000164428.e ENSGT00940000164428.f.b ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a ENSGT00940000157537 ENSGT00940000176159 ENSGT00940000155365.a.a ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00940000153664.A.a.m.b.b.a.b ENSGT01100000264173 ENSGT00940000160796 #18 ENSGT00950000183092.b.b ENSGT00940000170470 ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E Ursus ANCESTRAL SPECIES 56 ENSGT00940000164428.e ENSGT00940000164428.f.b ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a ENSGT00940000157537.bb ENSGT00940000176159 ENSGT00940000155365.a.a ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00940000153664.A.a.m.b.b.a.b ENSGT01100000264173 ENSGT00940000160796 #18 ENSGT00950000183092.b.b ENSGT00940000170470 ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E American black bear MODERN SPECIES 511 CLASP2 (ENSUAMG00000022209) #21 UBP1 (ENSUAMG00000022092) #22 FBXL2 (ENSUAMG00000022087) #24 SUSD5 (ENSUAMG00000022086) #26 CRTAP (ENSUAMG00000022077) #27 GLB1 (ENSUAMG00000022070) #28 Polar bear MODERN SPECIES 112 ENSUMAG00000015390 ENSUMAG00000015381 ZNF445 (ENSUMAG00000015369) TCAIM (ENSUMAG00000015356) TOPAZ1 (ENSUMAG00000015283) ABHD5 (ENSUMAG00000015208) ENSUMAG00000015207 ENSUMAG00000015184 ENSUMAG00000015182 CLASP2 (ENSUMAG00000008980) #21 UBP1 (ENSUMAG00000008170) #22 FBXL2 (ENSUMAG00000008154) #24 SUSD5 (ENSUMAG00000008126) #26 CRTAP (ENSUMAG00000008118) #27 GLB1 (ENSUMAG00000007503) #28 CCR4 (ENSUMAG00000007446) #29 CNOT10 (ENSUMAG00000007431) #31 ENSUMAG00000007423 ENSUMAG00000006668 ARPP21 (ENSUMAG00000006519) #18 STAC (ENSUMAG00000006496) ENSUMAG00000006479 DCLK3 (ENSUMAG00000006475) TRANK1 (ENSUMAG00000006416) EPM2AIP1 (ENSUMAG00000006407) MLH1 (ENSUMAG00000006371) Giant Panda MODERN SPECIES 16 CST7 (ENSAMEG00000014248) APMAP (ENSAMEG00000014230) ACSS1 (ENSAMEG00000014206) ENSAMEG00000003561 PYGB (ENSAMEG00000003436) ABHD12 (ENSAMEG00000003400) ENSAMEG00000028823 ENSAMEG00000001886 ENSAMEG00000026067 ENSAMEG00000009413 TOPAZ1 (ENSAMEG00000027745) ABHD5 (ENSAMEG00000015600) ENSAMEG00000015613 ENSAMEG00000005957 ENSAMEG00000002236 #21 UBP1 (ENSAMEG00000002341) #22 FBXL2 (ENSAMEG00000002391) #24 SUSD5 (ENSAMEG00000002441) #26 CRTAP (ENSAMEG00000002444) #27 GLB1 (ENSAMEG00000029108) #28 CCR4 (ENSAMEG00000020234) #29 ENSAMEG00000023809 ENSAMEG00000002481 #30 ENSAMEG00000002482 #31 ENSAMEG00000020235 ENSAMEG00000002537 ENSAMEG00000017937 #18 STAC (ENSAMEG00000017932) DCLK3 (ENSAMEG00000017930) TRANK1 (ENSAMEG00000017925) EPM2AIP1 (ENSAMEG00000019899) Mustelinae ANCESTRAL SPECIES 174 ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a ENSGT00940000157537 ENSGT00940000155365.a.a ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 Ferret MODERN SPECIES 353 ENSMPUG00000012880 ENSMPUG00000019641 ZNF445 (ENSMPUG00000012887) TCAIM (ENSMPUG00000012890) TOPAZ1 (ENSMPUG00000012903) ENSMPUG00000019643 ABHD5 (ENSMPUG00000012931) ANO10 (ENSMPUG00000012971) SNRK (ENSMPUG00000012977) CLASP2 (ENSMPUG00000012992) #21 UBP1 (ENSMPUG00000013008) #22 FBXL2 (ENSMPUG00000013018) #24 SUSD5 (ENSMPUG00000013095) #26 ENSMPUG00000013108 CRTAP (ENSMPUG00000013111) #27 GLB1 (ENSMPUG00000013118) #28 TRIM71 (ENSMPUG00000013126) #30 ENSMPUG00000013133 CNOT10 (ENSMPUG00000013138) #31 PDCD6IP (ENSMPUG00000013234) #19 American mink MODERN SPECIES 252 ENSNVIG00000003738 TOPAZ1 (ENSNVIG00000003771) ABHD5 (ENSNVIG00000003851) ANO10 (ENSNVIG00000003884) SNRK (ENSNVIG00000004096) ENSNVIG00000004109 CLASP2 (ENSNVIG00000004171) #21 UBP1 (ENSNVIG00000005119) #22 FBXL2 (ENSNVIG00000005594) #24 SUSD5 (ENSNVIG00000005632) #26 CRTAP (ENSNVIG00000005645) #27 GLB1 (ENSNVIG00000005670) #28 CCR4 (ENSNVIG00000005685) #29 TRIM71 (ENSNVIG00000005717) #30 CNOT10 (ENSNVIG00000005728) #31 ENSNVIG00000005789 Canidae ANCESTRAL SPECIES 24 ENSGT01100000263540.A.a ENSGT00950000183148.b.b ENSGT00940000160517 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000003094 ENSGT00940000164428.e ENSGT00940000164428.f.b ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a ENSGT00940000157537 ENSGT00940000155365.a.a ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT01100000263710 ENSGT00940000160796 #18 ENSGT00950000183092.b.b ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 Canis_lupus ANCESTRAL SPECIES 27 ENSGT01100000263540.A.a ENSGT00950000183148.b.b ENSGT00940000160517 ENSGT00390000013968 ENSGT00660000095541.a.a ENSGT00390000003094.c ENSGT00940000164428.e ENSGT00940000164428.f.b ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a ENSGT00940000157537 ENSGT00940000155365.a.a ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT01100000263710 ENSGT00940000163083 ENSGT00940000160796 #18 ENSGT00950000183092.b.b ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E Dingo MODERN SPECIES 326 GINS1 (ENSCAFG00020005786) NINL (ENSCAFG00020005723) ENSCAFG00020005719 ENSCAFG00020005712 ENSCAFG00020005711 ZNF445 (ENSCAFG00020005703) TCAIM (ENSCAFG00020005698) TOPAZ1 (ENSCAFG00020005672) ENSCAFG00020005662 ABHD5 (ENSCAFG00020005633) ENSCAFG00020005630 ENSCAFG00020005627 ANO10 (ENSCAFG00020005621) SNRK (ENSCAFG00020005597) CLASP2 (ENSCAFG00020002594) #21 UBP1 (ENSCAFG00020002404) #22 FBXL2 (ENSCAFG00020002395) #24 ENSCAFG00020002387 ENSCAFG00020002380 ENSCAFG00020002378 #26 CRTAP (ENSCAFG00020002375) #27 TMPPE (ENSCAFG00020002374) GLB1 (ENSCAFG00020002368) #28 CCR4 (ENSCAFG00020002363) #29 TRIM71 (ENSCAFG00020002354) #30 CNOT10 (ENSCAFG00020001836) #31 ENSCAFG00020001754 ENSCAFG00020001741 ENSCAFG00020001731 ARPP21 (ENSCAFG00020001655) #18 STAC (ENSCAFG00020001553) Dog MODERN SPECIES 15 NINL (ENSCAFG00845029110) NANP (ENSCAFG00845029217) ENSCAFG00845029250 ENSCAFG00845019227 ZNF445 (ENSCAFG00845019305) ENSCAFG00845019385 ENSCAFG00845019630 ENSCAFG00845019724 ABHD5 (ENSCAFG00845020085) ENSCAFG00845020170 ENSCAFG00845020203 ENSCAFG00845020239 ENSCAFG00845020275 SNRK (ENSCAFG00845020337) CLASP2 (ENSCAFG00845020608) #21 UBP1 (ENSCAFG00845022384) #22 FBXL2 (ENSCAFG00845022675) #24 SUSD5 (ENSCAFG00845023061) #26 CRTAP (ENSCAFG00845023248) #27 GLB1 (ENSCAFG00845023378) #28 TMPPE (ENSCAFG00845023550) CCR4 (ENSCAFG00845023571) #29 TRIM71 (ENSCAFG00845023600) #30 CNOT10 (ENSCAFG00845023808) #31 ENSCAFG00845024788 ARPP21 (ENSCAFG00845025149) #18 STAC (ENSCAFG00845025749) TRANK1 (ENSCAFG00845026194) EPM2AIP1 (ENSCAFG00845026884) MLH1 (ENSCAFG00845027002) LRRFIP2 (ENSCAFG00845027518) Red fox MODERN SPECIES 122 ABHD12 (ENSVVUG00000022271) GINS1 (ENSVVUG00000022265) NINL (ENSVVUG00000022254) ENSVVUG00000022250 NANP (ENSVVUG00000022249) ZKSCAN7 (ENSVVUG00000022246) ENSVVUG00000022234 ZNF445 (ENSVVUG00000022223) TCAIM (ENSVVUG00000022195) TOPAZ1 (ENSVVUG00000022169) ENSVVUG00000022167 ABHD5 (ENSVVUG00000022141) ANO10 (ENSVVUG00000022136) SNRK (ENSVVUG00000022132) CLASP2 (ENSVVUG00000022104) #21 UBP1 (ENSVVUG00000022100) #22 FBXL2 (ENSVVUG00000022097) #24 ENSVVUG00000022094 SUSD5 (ENSVVUG00000022093) #26 CRTAP (ENSVVUG00000022092) #27 TMPPE (ENSVVUG00000022091) GLB1 (ENSVVUG00000022090) #28 CCR4 (ENSVVUG00000022087) #29 TRIM71 (ENSVVUG00000022082) #30 CNOT10 (ENSVVUG00000022068) #31 PDCD6IP (ENSVVUG00000022059) ENSVVUG00000022045 ENSVVUG00000022028 ARPP21 (ENSVVUG00000021975) #18 STAC (ENSVVUG00000021951) ENSVVUG00000021949 Felidae ANCESTRAL SPECIES 9 ENSGT00940000162289 ENSGT00940000162801 ENSGT00940000163766 ENSGT00940000164428.f.a.a ENSGT00940000164428.f.b ENSGT00940000164428.f.a.b ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00390000016277.a ENSGT00940000157537 ENSGT00940000155365.a.a ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00940000163083 ENSGT00940000160796 #18 ENSGT00950000183092.b.b ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 Panthera ANCESTRAL SPECIES 12 ENSGT00940000162289 ENSGT00940000162801 ENSGT00940000163766 ENSGT00940000164428.f.a.a ENSGT00940000164428.f.a.b ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00940000158501.z ENSGT00390000016277.a ENSGT00940000157537 ENSGT00940000155365.a.a ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00940000163083 ENSGT00940000160796 #18 ENSGT00950000183092.b.b ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 Panthera_a ANCESTRAL SPECIES 17 ENSGT00940000162289 ENSGT00940000162801 ENSGT00940000163766 ENSGT00940000164428.f.a.a ENSGT00940000164428.f.a.b ENSGT00900000141186 ENSGT00390000012832 ENSGT00390000012495 ENSGT00940000158501.z ENSGT00390000016277.a ENSGT00940000157537 ENSGT00940000155365.a.a ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00940000163083 ENSGT00940000160796 #18 ENSGT00950000183092.b.b ENSGT00940000159476 ENSGT00940000153370.b ENSGT00950000182812.E ENSGT00800000124177 ENSGT00530000063564.a leopard MODERN SPECIES 75 ZNF35 (ENSPPRG00000011060) ZNF197 (ENSPPRG00000010667) ZNF660 (ENSPPRG00000017110) ENSPPRG00000010230 ENSPPRG00000009775 ZNF445 (ENSPPRG00000009533) TCAIM (ENSPPRG00000009299) TOPAZ1 (ENSPPRG00000008934) ENSPPRG00000008463 ABHD5 (ENSPPRG00000008335) ANO10 (ENSPPRG00000007666) SNRK (ENSPPRG00000006369) CLASP2 (ENSPPRG00000005179) #21 UBP1 (ENSPPRG00000014176) #22 FBXL2 (ENSPPRG00000012802) #24 SUSD5 (ENSPPRG00000011926) #26 CRTAP (ENSPPRG00000011752) #27 GLB1 (ENSPPRG00000011080) #28 CCR4 (ENSPPRG00000016036) #29 TRIM71 (ENSPPRG00000010150) #30 CNOT10 (ENSPPRG00000009955) #31 ENSPPRG00000007728 ARPP21 (ENSPPRG00000006681) #18 STAC (ENSPPRG00000002159) DCLK3 (ENSPPRG00000001743) TRANK1 (ENSPPRG00000000968) EPM2AIP1 (ENSPPRG00000015660) MLH1 (ENSPPRG00000019234) LRRFIP2 (ENSPPRG00000012905) lion MODERN SPECIES 9 ZNF445 (ENSPLOG00000004927) TCAIM (ENSPLOG00000004956) TOPAZ1 (ENSPLOG00000005016) ENSPLOG00000005102 ABHD5 (ENSPLOG00000005139) ANO10 (ENSPLOG00000005223) SNRK (ENSPLOG00000005283) CLASP2 (ENSPLOG00000005469) #21 UBP1 (ENSPLOG00000006293) #22 FBXL2 (ENSPLOG00000006395) #24 SUSD5 (ENSPLOG00000006511) #26 CRTAP (ENSPLOG00000006543) #27 GLB1 (ENSPLOG00000006606) #28 CCR4 (ENSPLOG00000006627) #29 TRIM71 (ENSPLOG00000006648) #30 CNOT10 (ENSPLOG00000006710) #31 ENSPLOG00000006862 ENSPLOG00000006909 ARPP21 (ENSPLOG00000007123) #18 STAC (ENSPLOG00000007219) ENSPLOG00000007312 DCLK3 (ENSPLOG00000007340) TRANK1 (ENSPLOG00000007377) EPM2AIP1 (ENSPLOG00000007490) Tiger MODERN SPECIES 597 ZNF35 (ENSPTIG00000012753) ZNF197 (ENSPTIG00000012886) ZNF660 (ENSPTIG00000009939) ENSPTIG00000012983 ENSPTIG00000013090 ZNF445 (ENSPTIG00000013152) TCAIM (ENSPTIG00000013194) TOPAZ1 (ENSPTIG00000013534) ENSPTIG00000013759 ABHD5 (ENSPTIG00000013792) ANO10 (ENSPTIG00000013928) SNRK (ENSPTIG00000014446) CLASP2 (ENSPTIG00000014763) #21 UBP1 (ENSPTIG00000017011) #22 FBXL2 (ENSPTIG00000017322) #24 SUSD5 (ENSPTIG00000017538) #26 CRTAP (ENSPTIG00000017634) #27 TMPPE (ENSPTIG00000009987) GLB1 (ENSPTIG00000017781) #28 CCR4 (ENSPTIG00000009992) #29 TRIM71 (ENSPTIG00000017889) #30 CNOT10 (ENSPTIG00000017926) #31 Cat MODERN SPECIES 240 ZNF35 (ENSFCAG00000044663) ZNF197 (ENSFCAG00000021993) ENSFCAG00000041966 ENSFCAG00000039929 ZNF445 (ENSFCAG00000037459) TCAIM (ENSFCAG00000015168) ENSFCAG00000032326 TOPAZ1 (ENSFCAG00000027563) ABHD5 (ENSFCAG00000008874) ANO10 (ENSFCAG00000003237) SNRK (ENSFCAG00000029507) CLASP2 (ENSFCAG00000006124) #21 UBP1 (ENSFCAG00000006123) #22 FBXL2 (ENSFCAG00000006121) #24 ENSFCAG00000052504 SUSD5 (ENSFCAG00000002920) #26 CRTAP (ENSFCAG00000018183) #27 GLB1 (ENSFCAG00000028444) #28 CCR4 (ENSFCAG00000002919) #29 TRIM71 (ENSFCAG00000002918) #30 CNOT10 (ENSFCAG00000002916) #31 PDCD6IP (ENSFCAG00000022852) ARPP21 (ENSFCAG00000013391) #18 STAC (ENSFCAG00000005011) DCLK3 (ENSFCAG00000022392) TRANK1 (ENSFCAG00000004817) EPM2AIP1 (ENSFCAG00000030150) MLH1 (ENSFCAG00000001371) Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Chiroptera ANCESTRAL SPECIES 19 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Microchiroptera ANCESTRAL SPECIES 16 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000263628 #19 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Greater horseshoe bat MODERN SPECIES 8 VILL (ENSRFEG00010021183) CTDSPL (ENSRFEG00010021213) ITGA9 (ENSRFEG00010021275) GOLGA4 (ENSRFEG00010021350) LRRFIP2 (ENSRFEG00010021479) MLH1 (ENSRFEG00010021555) EPM2AIP1 (ENSRFEG00010021591) TRANK1 (ENSRFEG00010021598) DCLK3 (ENSRFEG00010021623) STAC (ENSRFEG00010021640) ENSRFEG00010021648 ARPP21 (ENSRFEG00010021667) #18 ENSRFEG00010021696 PDCD6IP (ENSRFEG00010005339) #19 CLASP2 (ENSRFEG00010005659) #21 UBP1 (ENSRFEG00010006227) #22 FBXL2 (ENSRFEG00010006318) #24 SUSD5 (ENSRFEG00010006366) #26 CRTAP (ENSRFEG00010006405) #27 GLB1 (ENSRFEG00010006454) #28 ENSRFEG00010006513 CCR4 (ENSRFEG00010006527) #29 TRIM71 (ENSRFEG00010006548) #30 CNOT10 (ENSRFEG00010006629) #31 DYNC1LI1 (ENSRFEG00010006794) #34 CMTM6 (ENSRFEG00010006857) #36 CMTM8 (ENSRFEG00010006920) GPD1L (ENSRFEG00010007017) OSBPL10 (ENSRFEG00010007069) STT3B (ENSRFEG00010007149) GADL1 (ENSRFEG00010007234) Microbat MODERN SPECIES 976 PDCD6IP (ENSMLUG00000006659) #19 CLASP2 (ENSMLUG00000009490) #21 UBP1 (ENSMLUG00000010827) #22 FBXL2 (ENSMLUG00000010809) #24 SUSD5 (ENSMLUG00000014456) #26 CRTAP (ENSMLUG00000014448) #27 TMPPE (ENSMLUG00000014444) GLB1 (ENSMLUG00000014432) #28 CCR4 (ENSMLUG00000029205) #29 TRIM71 (ENSMLUG00000022658) #30 CNOT10 (ENSMLUG00000015925) #31 DYNC1LI1 (ENSMLUG00000000229) #34 CMTM6 (ENSMLUG00000000227) #36 ENSMLUG00000012799 #37 CMTM8 (ENSMLUG00000012796) GPD1L (ENSMLUG00000016861) OSBPL10 (ENSMLUG00000000572) STT3B (ENSMLUG00000000563) Megabat MODERN SPECIES 2682 CLASP2 (ENSPVAG00000004159) #21 UBP1 (ENSPVAG00000004158) #22 FBXL2 (ENSPVAG00000004157) #24 SUSD5 (ENSPVAG00000004156) #26 CRTAP (ENSPVAG00000004155) #27 TMPPE (ENSPVAG00000004154) GLB1 (ENSPVAG00000004153) #28 CCR4 (ENSPVAG00000004152) #29 TRIM71 (ENSPVAG00000004150) #30 CNOT10 (ENSPVAG00000004149) #31 Equus ANCESTRAL SPECIES 5 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Donkey MODERN SPECIES 13 PLCD1 (ENSEASG00005007479) VILL (ENSEASG00005007472) CTDSPL (ENSEASG00005007457) ITGA9 (ENSEASG00005007449) GOLGA4 (ENSEASG00005007416) LRRFIP2 (ENSEASG00005007395) MLH1 (ENSEASG00005007389) EPM2AIP1 (ENSEASG00005007387) TRANK1 (ENSEASG00005007374) DCLK3 (ENSEASG00005007362) STAC (ENSEASG00005007347) ARPP21 (ENSEASG00005007331) #18 PDCD6IP (ENSEASG00005007194) #19 ENSEASG00005024723 CLASP2 (ENSEASG00005006318) #21 UBP1 (ENSEASG00005006204) #22 ENSEASG00005031617 #24 ENSEASG00005032111 #24 SUSD5 (ENSEASG00005006200) #26 CRTAP (ENSEASG00005006198) #27 TMPPE (ENSEASG00005031717) GLB1 (ENSEASG00005006196) #28 CCR4 (ENSEASG00005031493) #29 TRIM71 (ENSEASG00005006192) #30 CNOT10 (ENSEASG00005006189) #31 DYNC1LI1 (ENSEASG00005006183) #34 CMTM6 (ENSEASG00005034157) #36 CMTM7 (ENSEASG00005034930) #37 CMTM8 (ENSEASG00005006179) GPD1L (ENSEASG00005006178) OSBPL10 (ENSEASG00005006177) Horse MODERN SPECIES 7 PLCD1 (ENSECAG00000023703) VILL (ENSECAG00000012325) ITGA9 (ENSECAG00000007848) GOLGA4 (ENSECAG00000013495) ENSECAG00000055774 LRRFIP2 (ENSECAG00000021270) MLH1 (ENSECAG00000000690) EPM2AIP1 (ENSECAG00000004874) TRANK1 (ENSECAG00000018264) ENSECAG00000020152 DCLK3 (ENSECAG00000020294) STAC (ENSECAG00000021165) ARPP21 (ENSECAG00000022872) #18 PDCD6IP (ENSECAG00000004691) CLASP2 (ENSECAG00000015474) #21 UBP1 (ENSECAG00000018555) #22 FBXL2 (ENSECAG00000024909) #24 SUSD5 (ENSECAG00000007972) #26 CRTAP (ENSECAG00000008409) #27 GLB1 (ENSECAG00000011942) #28 ENSECAG00000049408 CCR4 (ENSECAG00000005023) #29 TRIM71 (ENSECAG00000020845) #30 CNOT10 (ENSECAG00000021306) #31 DYNC1LI1 (ENSECAG00000010584) #34 CMTM6 (ENSECAG00000038275) #36 CMTM7 (ENSECAG00000036991) #37 ENSECAG00000051952 CMTM8 (ENSECAG00000017450) GPD1L (ENSECAG00000018150) OSBPL10 (ENSECAG00000023266) Atlantogenata ANCESTRAL SPECIES 58 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264173 ENSGT01100000266249 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 Xenarthra ANCESTRAL SPECIES 71 ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT01100000266249 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b Armadillo DUPLICATION Armadillo MODERN SPECIES 2803 ENSDNOG00000010025 CTDSPL (ENSDNOG00000044323) ENSDNOG00000047709 ITGA9 (ENSDNOG00000009308) GOLGA4 (ENSDNOG00000049325) LRRFIP2 (ENSDNOG00000018861) MLH1 (ENSDNOG00000014454) EPM2AIP1 (ENSDNOG00000044286) TRANK1 (ENSDNOG00000003573) DCLK3 (ENSDNOG00000043600) STAC (ENSDNOG00000036208) ENSDNOG00000046156 ARPP21 (ENSDNOG00000014858) #18 ENSDNOG00000046339 CLASP2 (ENSDNOG00000006773) #21 ENSDNOG00000019550 #22 FBXL2 (ENSDNOG00000012333) #24 SUSD5 (ENSDNOG00000042446) #26 ENSDNOG00000046716 CRTAP (ENSDNOG00000039885) #27 TMPPE (ENSDNOG00000038198) GLB1 (ENSDNOG00000036154) #28 CCR4 (ENSDNOG00000016020) #29 TRIM71 (ENSDNOG00000037575) #30 CNOT10 (ENSDNOG00000002358) #31 DYNC1LI1 (ENSDNOG00000003024) #34 ENSDNOG00000015014 #36 ENSDNOG00000042517 #37 CMTM8 (ENSDNOG00000016154) GPD1L (ENSDNOG00000039932) Armadillo MODERN SPECIES 546 ENSDNOG00000018905 #22 ENSDNOG00000044876 Sloth MODERN SPECIES 4305 UBP1 (ENSCHOG00000001692) #22 FBXL2 (ENSCHOG00000001683) #24 Afrotheria ANCESTRAL SPECIES 70 ENSGT01030000234626.C ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264173 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 ENSGT00940000157527 Afrotheria_a DUPLICATION Afrotheria_a ANCESTRAL SPECIES 67 ENSGT01030000234626.C ENSGT00390000006098 ENSGT00940000158392 ENSGT00940000160253 ENSGT01040000240451.a.b.b.d ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000182812.E ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT01100000264173 ENSGT00940000155574.C #21 ENSGT00940000156148.k #22 ENSGT00940000153845.a.b #24 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00940000159099 #30 ENSGT00390000001827 #31 ENSGT00390000008295.b #34 ENSGT00940000157911 #36 ENSGT00510000048725 #37 ENSGT00940000160520 ENSGT00390000003114.e.b.b.g ENSGT00940000157880 ENSGT00940000155488 ENSGT00940000158391 ENSGT00940000157527 Elephant MODERN SPECIES 348 CTDSPL (ENSLAFG00000006997) ENSLAFG00000026278 ENSLAFG00000024095 ENSLAFG00000001169 GOLGA4 (ENSLAFG00000001167) LRRFIP2 (ENSLAFG00000016834) MLH1 (ENSLAFG00000021468) EPM2AIP1 (ENSLAFG00000030494) DCLK3 (ENSLAFG00000026255) STAC (ENSLAFG00000014326) ARPP21 (ENSLAFG00000005797) #18 ENSLAFG00000001141 ENSLAFG00000027912 ENSLAFG00000030550 CLASP2 (ENSLAFG00000000172) #21 ENSLAFG00000030783 #22 FBXL2 (ENSLAFG00000002357) #24 TMPPE (ENSLAFG00000011868) GLB1 (ENSLAFG00000011863) #28 CCR4 (ENSLAFG00000001081) #29 TRIM71 (ENSLAFG00000026852) #30 CNOT10 (ENSLAFG00000012513) #31 DYNC1LI1 (ENSLAFG00000012623) #34 CMTM6 (ENSLAFG00000012617) #36 CMTM7 (ENSLAFG00000016543) #37 CMTM8 (ENSLAFG00000025679) ENSLAFG00000013996 OSBPL10 (ENSLAFG00000002340) STT3B (ENSLAFG00000002337) GADL1 (ENSLAFG00000003788) TGFBR2 (ENSLAFG00000003785) Hyrax MODERN SPECIES 3952 UBP1 (ENSPCAG00000008237) #22 FBXL2 (ENSPCAG00000008152) #24 Afrotheria_a ANCESTRAL SPECIES ENSGT00940000156148.l #22 Elephant MODERN SPECIES 56 TRIM26 (ENSLAFG00000011121) TRIM15 (ENSLAFG00000001203) TRIM10 (ENSLAFG00000001199) TRIM40 (ENSLAFG00000013364) ENSLAFG00000012582 RNF39 (ENSLAFG00000026684) PPP1R11 (ENSLAFG00000027660) POLR1H (ENSLAFG00000012576) ENSLAFG00000027525 MOG (ENSLAFG00000017461) GABBR1 (ENSLAFG00000017450) ENSLAFG00000028740 ENSLAFG00000032081 ENSLAFG00000032604 ENSLAFG00000006670 ENSLAFG00000029198 #22 ENSLAFG00000031929 ENSLAFG00000029181 UBD (ENSLAFG00000020621) ENSLAFG00000030949 ENSLAFG00000020882 ENSLAFG00000032026 ENSLAFG00000027364 ENSLAFG00000021464 ENSLAFG00000030210 ENSLAFG00000030646 ENSLAFG00000030024 ENSLAFG00000032193 ENSLAFG00000029206 ENSLAFG00000029720 OR12D3 (ENSLAFG00000031131) Tenrec MODERN SPECIES 4680 UBP1 (ENSETEG00000016510) #22 FBXL2 (ENSETEG00000016506) #24 Marsupialia ANCESTRAL SPECIES 60 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 Opossum DUPLICATION Opossum MODERN SPECIES 5 TTC21A (ENSMODG00000013468) ENSMODG00000021162 ENSMODG00000021163 ACAA1 (ENSMODG00000021165) HERPUD2 (ENSMODG00000021166) ENSMODG00000021167 #25 MATCAP2 (ENSMODG00000021169) ANLN (ENSMODG00000021170) ENSMODG00000021171 ENSMODG00000027724 ENSMODG00000002226 ARPP21 (ENSMODG00000002309) #18 ENSMODG00000038986 ENSMODG00000002472 CLASP2 (ENSMODG00000002548) #21 ENSMODG00000002605 #22 AVL9 (ENSMODG00000021550) KBTBD2 (ENSMODG00000021551) FKBP9 (ENSMODG00000021555) ENSMODG00000025514 NT5C3A (ENSMODG00000037427) ENSMODG00000024029 Opossum MODERN SPECIES 5 ATRIP (ENSMODG00000014362) CCDC51 (ENSMODG00000047787) PLXNB1 (ENSMODG00000014384) ENSMODG00000047840 PLPPR1 (ENSMODG00000014394) ENSMODG00000022961 ENSMODG00000014400 BAAT (ENSMODG00000014410) ENSMODG00000047572 MRPL50 (ENSMODG00000022960) ENSMODG00000014418 ENSMODG00000038083 RNF20 (ENSMODG00000014435) ENSMODG00000014442 ENSMODG00000050335 ENSMODG00000014457 #22 ENSMODG00000013605 ENSMODG00000048085 ENSMODG00000048599 ENSMODG00000022958 ENSMODG00000029187 ENSMODG00000042401 ENSMODG00000014565 ENSMODG00000042821 KLF4 (ENSMODG00000014569) RAD23B (ENSMODG00000014579) ENSMODG00000039459 ZNF462 (ENSMODG00000014597) TMEM38B (ENSMODG00000014644) TAL2 (ENSMODG00000022957) FKTN (ENSMODG00000014646) Marsupialia_b ANCESTRAL SPECIES 14 ENSGT00550000074921 ENSGT00390000004860 ENSGT00940000157238 ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 ENSGT00390000011897 ENSGT00390000010053 ENSGT00950000182952.D ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT01100000263551.b.b.b ENSGT00390000003442.n ENSGT00940000155380 ENSGT00940000159917 ENSGT01100000263525.b.b.b ENSGT01100000263525.b.b.a ENSGT00990000204321 ENSGT00940000164410 ENSGT00940000163414 ENSGT00940000161957 ENSGT00390000004199 Tasmanian devil DUPLICATION Tasmanian devil MODERN SPECIES 2 EPB41 (ENSSHAG00000011604) OPRD1 (ENSSHAG00000024576) YTHDF2 (ENSSHAG00000009502) GMEB1 (ENSSHAG00000009099) TAF12 (ENSSHAG00000008563) ENSSHAG00000030345 ENSSHAG00000008443 TRNAU1AP (ENSSHAG00000008108) RCC1 (ENSSHAG00000027903) PHACTR4 (ENSSHAG00000006497) MED18 (ENSSHAG00000031976) SESN2 (ENSSHAG00000004785) ENSSHAG00000022171 DNAJC8 (ENSSHAG00000003717) PTAFR (ENSSHAG00000026787) ENSSHAG00000029212 #22 EYA3 (ENSSHAG00000027000) XKR8 (ENSSHAG00000026927) SMPDL3B (ENSSHAG00000015331) RPA2 (ENSSHAG00000015255) THEMIS2 (ENSSHAG00000015133) PPP1R8 (ENSSHAG00000024313) FAM76A (ENSSHAG00000022341) FGR (ENSSHAG00000001546) WASF2 (ENSSHAG00000004886) GPR3 (ENSSHAG00000032210) CD164L2 (ENSSHAG00000003127) SYTL1 (ENSSHAG00000021748) TMEM222 (ENSSHAG00000025224) WDTC1 (ENSSHAG00000001544) SLC9A1 (ENSSHAG00000021244) Tasmanian devil MODERN SPECIES ENSSHAG00000000237 ENSSHAG00000028866 ENSSHAG00000029866 OGN (ENSSHAG00000020525) OMD (ENSSHAG00000026198) ASPN (ENSSHAG00000000510) ENSSHAG00000000081 ENSSHAG00000031896 ENSSHAG00000024444 ENSSHAG00000030691 STAC (ENSSHAG00000026743) ARPP21 (ENSSHAG00000027378) #18 ENSSHAG00000000968 ENSSHAG00000026693 #21 ENSSHAG00000028172 #21 ENSSHAG00000005805 #22 ENSSHAG00000025092 ENSSHAG00000028392 ENSSHAG00000021686 GNGT1 (ENSSHAG00000028716) ENSSHAG00000031526 ENSSHAG00000023066 ENSSHAG00000020702 ENSSHAG00000031702 ENSSHAG00000004011 ENSSHAG00000030232 ENSSHAG00000005767 ENSSHAG00000023991 ENSSHAG00000027370 ENSSHAG00000025494 ENSSHAG00000028316 Diprotodontia ANCESTRAL SPECIES 61 ENSGT00550000074921 ENSGT00390000004860 ENSGT00940000157238 ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 ENSGT00390000011897 ENSGT00390000010053 ENSGT00950000182952.D ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT01100000263551.b.b.b ENSGT00390000003442.n ENSGT00940000155380 ENSGT00940000159917 ENSGT01100000263525.b.b.b ENSGT00990000204321 ENSGT00940000164410 ENSGT00940000163414 ENSGT00940000161957 ENSGT00390000004199 Wallaby MODERN SPECIES 5931 UBP1 (ENSMEUG00000013709) #22 Diprotodontia_a ANCESTRAL SPECIES 10 ENSGT00390000004860 ENSGT00940000157238 ENSGT00940000160986 ENSGT00940000157444 ENSGT00940000159941 ENSGT00390000011897 ENSGT00390000010053 ENSGT00950000182952.D ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000160453 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT01100000263551.b.b.b ENSGT00390000003442.n.a ENSGT00940000155380 ENSGT00940000159917 ENSGT01100000263525.b.b.b ENSGT00990000204321 ENSGT00940000164410 ENSGT00940000163414 ENSGT00940000161957 ENSGT00390000004199 Common wonbat MODERN SPECIES 1053 OGN (ENSVURG00010018080) OMD (ENSVURG00010018083) ASPN (ENSVURG00010018088) ECM2 (ENSVURG00010018095) ENSVURG00010018098 IPPK (ENSVURG00010018105) ENSVURG00010018117 TRANK1 (ENSVURG00010018135) DCLK3 (ENSVURG00010018148) STAC (ENSVURG00010018159) ENSVURG00010018205 #18 ENSVURG00010018212 #18 TAPBPL (ENSVURG00010018282) ENSVURG00010018288 CLASP2 (ENSVURG00010018322) #21 UBP1 (ENSVURG00010018427) #22 HEPACAM2 (ENSVURG00010018479) ENSVURG00010018485 ENSVURG00010018527 CALCR (ENSVURG00010019257) TFPI2 (ENSVURG00010019266) GNGT1 (ENSVURG00010019270) ENSVURG00010019273 ENSVURG00010019282 ENSVURG00010019288 CHP2 (ENSVURG00010019298) ENSVURG00010019305 ENSVURG00010019320 ENSVURG00010019328 ENSVURG00010019332 koala DUPLICATION koala MODERN SPECIES 346 ENSPCIG00000025598 ENSPCIG00000025595 CLASP2 (ENSPCIG00000013269) #21 UBP1 (ENSPCIG00000013186) #22 HEPACAM2 (ENSPCIG00000013185) VPS50 (ENSPCIG00000013184) CALCR (ENSPCIG00000013173) ENSPCIG00000011196 GNGT1 (ENSPCIG00000011200) ENSPCIG00000011201 ENSPCIG00000011205 ENSPCIG00000025435 ENSPCIG00000014207 ENSPCIG00000010065 ENSPCIG00000032447 koala MODERN SPECIES 134 ENSPCIG00000029798 ENSPCIG00000029801 ENSPCIG00000016613 #22 ENSPCIG00000027415 SLITRK5 (ENSPCIG00000013877) ENSPCIG00000009125 ENSPCIG00000005198 ENSPCIG00000001015 SLITRK6 (ENSPCIG00000001037) ENSPCIG00000032847 Platypus MODERN SPECIES 13 GPR141 (ENSOANG00000039845) ELMO1 (ENSOANG00000038864) AOAH (ENSOANG00000042679) ANLN (ENSOANG00000001544) MATCAP2 (ENSOANG00000041601) SMOC2 (ENSOANG00000002822) LRRFIP2 (ENSOANG00000015304) MLH1 (ENSOANG00000015305) TRANK1 (ENSOANG00000015307) DCLK3 (ENSOANG00000039678) STAC (ENSOANG00000015309) ENSOANG00000001369 #18 ENSOANG00000042489 #18 ENSOANG00000008307 CLASP2 (ENSOANG00000008308) #21 UBP1 (ENSOANG00000008309) #22 FBXL2 (ENSOANG00000008310) #24 ENSOANG00000008311 #26 CRTAP (ENSOANG00000021210) #27 GLB1 (ENSOANG00000012154) #28 CCR4 (ENSOANG00000012155) #29 CX3CR1 (ENSOANG00000003978) ##29 CCR8 (ENSOANG00000038830) ##29 ENSOANG00000044574 ENSOANG00000011995 ENSOANG00000042498 ENSOANG00000002415 UBE2C (ENSOANG00000031758) TNNC2 (ENSOANG00000046999) ENSOANG00000048231 ENSOANG00000045670 Sauria ANCESTRAL SPECIES ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00960000192712 ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B ##29 ENSGT00940000164532 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 Lepidosauria ANCESTRAL SPECIES 5 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00960000192712 ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 ENSGT00390000003571 ENSGT00940000155697.A Episquamata ANCESTRAL SPECIES 5 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 ENSGT00390000003571 ENSGT00940000155697.A Laterata ANCESTRAL SPECIES 39 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b Common wall lizard MODERN SPECIES 3 ITPRID1 (ENSPMRG00000018323) NEUROD6 (ENSPMRG00000018349) ITGA9 (ENSPMRG00000018361) GOLGA4 (ENSPMRG00000018400) LRRFIP2 (ENSPMRG00000018496) MLH1 (ENSPMRG00000018516) TRANK1 (ENSPMRG00000018528) ENSPMRG00000018540 ENSPMRG00000018544 STAC (ENSPMRG00000018550) ARPP21 (ENSPMRG00000018567) #18 ENSPMRG00000018600 ENSPMRG00000018608 ENSPMRG00000018622 CLASP2 (ENSPMRG00000018710) #21 UBP1 (ENSPMRG00000019202) #22 FBXL2 (ENSPMRG00000019221) #24 SUSD5 (ENSPMRG00000019231) #26 CRTAP (ENSPMRG00000019235) #27 GLB1 (ENSPMRG00000019238) #28 TMPPE (ENSPMRG00000019263) ENSPMRG00000019270 #29 ENSPMRG00000019277 ENSPMRG00000015020 ENSPMRG00000015026 CX3CR1 (ENSPMRG00000015041) ##29 ENSPMRG00000015046 #29 ENSPMRG00000015047 FKBP9 (ENSPMRG00000015053) NT5C3A (ENSPMRG00000015066) BBS9 (ENSPMRG00000015093) Argentine black and white tegu MODERN SPECIES 89 ENSSMRG00000006168 NEUROD6 (ENSSMRG00000006145) ITGA9 (ENSSMRG00000006135) GOLGA4 (ENSSMRG00000006108) LRRFIP2 (ENSSMRG00000006092) MLH1 (ENSSMRG00000006084) TRANK1 (ENSSMRG00000006045) DCLK3 (ENSSMRG00000006041) STAC (ENSSMRG00000006031) ARPP21 (ENSSMRG00000005842) #18 ENSSMRG00000005820 CLASP2 (ENSSMRG00000005811) #21 UBP1 (ENSSMRG00000005800) #22 ENSSMRG00000005799 MYRIP (ENSSMRG00000005781) Toxicofera ANCESTRAL SPECIES 4 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00990000210357 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT00940000164532 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 ENSGT00390000003571 ENSGT00940000155697.A Elapidae ANCESTRAL SPECIES 5 ENSGT00500000045246 ENSGT00940000156069 ENSGT00390000010255.h ENSGT00390000001455 ENSGT00940000155331.A ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139.q ENSGT00530000063564.a ENSGT00800000124177 ENSGT00950000183092.b.b ENSGT00940000163083 ENSGT00940000155574.C.v.b #21 ENSGT01100000263710 ENSGT00940000155574.C.v.a #21 ENSGT00940000156148 #22 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00940000160239 ENSGT00390000003571 ENSGT00940000155697.A ENSGT00940000156541 ENSGT00940000155471.d.g.b ENSGT00390000001296 ENSGT00390000012690 ENSGT00940000155721 ENSGT00950000183130.C Indian cobra MODERN SPECIES 337 ENSNNAG00000014864 ENSNNAG00000014848 ENSNNAG00000014839 NEUROD6 (ENSNNAG00000014830) ENSNNAG00000014819 ITGA9 (ENSNNAG00000014539) GOLGA4 (ENSNNAG00000014484) LRRFIP2 (ENSNNAG00000014146) ENSNNAG00000014092 ENSNNAG00000014062 STAC (ENSNNAG00000014003) ENSNNAG00000013988 ENSNNAG00000013837 ENSNNAG00000013814 CLASP2 (ENSNNAG00000011260) #21 UBP1 (ENSNNAG00000011011) #22 CRTAP (ENSNNAG00000010978) #27 GLB1 (ENSNNAG00000010897) #28 CCR4 (ENSNNAG00000010865) #29 ENSNNAG00000010810 ENSNNAG00000010776 ENSNNAG00000010756 EIF1B (ENSNNAG00000010727) ENSNNAG00000010695 CCK (ENSNNAG00000010680) TRAK1 (ENSNNAG00000009926) ENSNNAG00000009877 ENSNNAG00000009783 KIAA1143 (ENSNNAG00000009751) ENSNNAG00000009720 ZDHHC3 (ENSNNAG00000009686) Elapidae_a ANCESTRAL SPECIES 84 ENSGT01100000263710 ENSGT00940000155574.C.v.a #21 ENSGT00940000156148 #22 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000003571 ENSGT00940000155697.A ENSGT00940000155471.d.g.b ENSGT00390000001296 ENSGT00390000012690 ENSGT00940000155721 ENSGT00950000183130.C ENSGT00950000183186.B.b ENSGT00390000010209 ENSGT00390000009719 Acanthophiinae ANCESTRAL SPECIES 79 ENSGT01100000263710 ENSGT00940000155574.C.v.a #21 ENSGT00940000156148 #22 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000003571 ENSGT00940000155697.A ENSGT00940000155471.d.g.b ENSGT00390000001296 ENSGT00390000012690 ENSGT00940000155721 ENSGT00950000183130.C ENSGT00950000183186.B.b ENSGT00390000010209 ENSGT00390000009719 Eastern brown snake MODERN SPECIES 113 ENSPTXG00000018743 STAC (ENSPTXG00000010792) ENSPTXG00000010793 CLASP2 (ENSPTXG00000010837) #21 UBP1 (ENSPTXG00000014713) #22 CRTAP (ENSPTXG00000014714) #27 GLB1 (ENSPTXG00000014715) #28 MYRIP (ENSPTXG00000014716) ENSPTXG00000014718 ENSPTXG00000014719 Mainland tiger snake MODERN SPECIES 102 ENSNSUG00000006417 #21 UBP1 (ENSNSUG00000006421) #22 CRTAP (ENSNSUG00000006671) #27 ENSNSUG00000006673 GLB1 (ENSNSUG00000006674) #28 ENSNSUG00000006676 ENSNSUG00000006683 ENSNSUG00000006684 CCK (ENSNSUG00000006685) TRAK1 (ENSNSUG00000006690) ENSNSUG00000006691 ENSNSUG00000006692 KIAA1143 (ENSNSUG00000006693) TMEM42 (ENSNSUG00000006694) ZDHHC3 (ENSNSUG00000006695) EXOSC7 (ENSNSUG00000006697) ENSNSUG00000006707 Blue-lipped sea krait MODERN SPECIES 200 UBP1 (ENSLLTG00000018373) #22 Lizard MODERN SPECIES 938 ENSACAG00000037887 ENSACAG00000039223 ENSACAG00000013370 CLASP2 (ENSACAG00000013490) #21 UBP1 (ENSACAG00000013565) #22 FBXL2 (ENSACAG00000013666) #24 ENSACAG00000036764 CRTAP (ENSACAG00000037793) #27 GLB1 (ENSACAG00000013765) #28 ENSACAG00000040933 CCR4 (ENSACAG00000014037) #29 ENSACAG00000014040 ##29 ENSACAG00000014043 ENSACAG00000041892 ENSACAG00000014069 ENSACAG00000021130 ##29 ENSACAG00000014097 ##29 ENSACAG00000028320 ##29 XCR1 (ENSACAG00000014112) CXCR6 (ENSACAG00000014156) tuatara MODERN SPECIES 446 ENSSPUG00000009862 CLASP2 (ENSSPUG00000009434) #21 UBP1 (ENSSPUG00000009330) #22 FBXL2 (ENSSPUG00000009300) #24 CRTAP (ENSSPUG00000009290) #27 GLB1 (ENSSPUG00000009246) #28 CCR4 (ENSSPUG00000009241) #29 CX3CR1 (ENSSPUG00000009236) ##29 Archelosauria ANCESTRAL SPECIES 6 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00960000192712 ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B.c ##29 ENSGT00940000164532 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 Archosauria ANCESTRAL SPECIES ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00960000192712 ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B.c ##29 ENSGT00940000164532 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 Aves ANCESTRAL SPECIES 5 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B.c ##29 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 ENSGT00390000003571 Neognathae ANCESTRAL SPECIES ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B.c ##29 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 ENSGT00390000003571 Galloanserae ANCESTRAL SPECIES ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B.c ##29 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 ENSGT00390000003571 Anatidae ANCESTRAL SPECIES 92 ENSGT00390000017432 ENSGT00950000183170.b.a ENSGT00940000153875.c ENSGT01100000263710 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B.c ##29 ENSGT00550000075117 ENSGT00950000183099.u.b ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 ENSGT00390000003571 Pink-footed goose MODERN SPECIES 297 TRIP13 (ENSABRG00000017917) BRD9 (ENSABRG00000017906) TPPP (ENSABRG00000017899) CLASP2 (ENSABRG00000016859) #21 UBP1 (ENSABRG00000016467) #22 FBXL2 (ENSABRG00000016264) #24 SUSD5 (ENSABRG00000016252) #26 CRTAP (ENSABRG00000016246) #27 CCR4 (ENSABRG00000016239) #29 CX3CR1 (ENSABRG00000016234) ##29 GLB1 (ENSABRG00000016216) #28 ENSABRG00000016211 ##29 ENSABRG00000016208 ##29 SLC25A38 (ENSABRG00000016206) Duck MODERN SPECIES 10 SMIM13 (ENSAPLG00000023021) NEDD9 (ENSAPLG00000001295) ENSAPLG00000001290 ENSAPLG00000028781 ENSAPLG00000011790 ARPP21 (ENSAPLG00000004808) #18 STAC (ENSAPLG00000010417) DCLK3 (ENSAPLG00000010406) TRANK1 (ENSAPLG00000010356) TRIP13 (ENSAPLG00000010065) ENSAPLG00000018632 ENSAPLG00000010017 TPPP (ENSAPLG00000009901) ENSAPLG00000017452 CLASP2 (ENSAPLG00000001903) #21 UBP1 (ENSAPLG00000001472) #22 FBXL2 (ENSAPLG00000001346) #24 ENSAPLG00000020944 SUSD5 (ENSAPLG00000001335) #26 CRTAP (ENSAPLG00000001236) #27 TMPPE (ENSAPLG00000001209) GLB1 (ENSAPLG00000001019) #28 CCR4 (ENSAPLG00000001205) #29 EIF1B (ENSAPLG00000001143) ENSAPLG00000023148 MYRIP (ENSAPLG00000016281) ENSAPLG00000016788 ENSAPLG00000015724 SLC25A38 (ENSAPLG00000015901) ENSAPLG00000020928 CX3CR1 (ENSAPLG00000001393) ##29 Phasianidae ANCESTRAL SPECIES 1 ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B.c ##29 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 ENSGT00390000003571 Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00390000008427 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B.c ##29 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 ENSGT00390000003571 Turkey MODERN SPECIES 26 AOAH (ENSMGAG00000011987) ELMO1 (ENSMGAG00000011976) ENSMGAG00000015889 ENSMGAG00000016152 NME8 (ENSMGAG00000011969) SFRP4 (ENSMGAG00000011966) EPDR1 (ENSMGAG00000011962) STARD3NL (ENSMGAG00000011954) MLH1 (ENSMGAG00000011939) TRANK1 (ENSMGAG00000011934) DCLK3 (ENSMGAG00000011929) STAC (ENSMGAG00000011923) ARPP21 (ENSMGAG00000011901) #18 ENSMGAG00000011875 CLASP2 (ENSMGAG00000011838) #21 UBP1 (ENSMGAG00000011814) #22 FBXL2 (ENSMGAG00000011795) #24 SUSD5 (ENSMGAG00000011793) #26 CRTAP (ENSMGAG00000011787) #27 GLB1 (ENSMGAG00000011775) #28 CCR4 (ENSMGAG00000016137) #29 ENSMGAG00000016133 ##29 ENSMGAG00000011774 ##29 SLC25A38 (ENSMGAG00000011769) ENSMGAG00000011754 ENSMGAG00000011747 MYRIP (ENSMGAG00000011737) ENSMGAG00000011736 ENSMGAG00000016130 EIF1B (ENSMGAG00000011733) CCK (ENSMGAG00000022911) Chicken MODERN SPECIES 11 ELMO1 (ENSGALG00010016729) GPR141 (ENSGALG00010016682) ENSGALG00010016665 NME9 (ENSGALG00010015943) SFRP4 (ENSGALG00010016100) EPDR1 (ENSGALG00010016059) STARD3NL (ENSGALG00010016137) MLH1 (ENSGALG00010016109) TRANK1 (ENSGALG00010016655) DCLK3 (ENSGALG00010018405) STAC (ENSGALG00010018391) ARPP21 (ENSGALG00010018378) #18 ENSGALG00010019691 PDCD6IP (ENSGALG00010018338) CLASP2 (ENSGALG00010018315) #21 UBP1 (ENSGALG00010018188) #22 FBXL2 (ENSGALG00010018157) #24 SUSD5 (ENSGALG00010017100) #26 CRTAP (ENSGALG00010017089) #27 TMPPE (ENSGALG00010017063) GLB1 (ENSGALG00010017045) #28 CCR4 (ENSGALG00010017022) #29 CX3CR1 (ENSGALG00010017004) ##29 CCR8 (ENSGALG00010016948) ##29 SLC25A38 (ENSGALG00010016934) RPSAP58 (ENSGALG00010016040) TMC2 (ENSGALG00010015934) MYRIP (ENSGALG00010015919) ENSGALG00010015863 EIF1B (ENSGALG00010016526) CCK (ENSGALG00010016489) Japanese quail MODERN SPECIES 11 ENSCJPG00005014784 ENSCJPG00005014782 GPR141 (ENSCJPG00005014780) ENSCJPG00005014779 NME8 (ENSCJPG00005014778) SFRP4 (ENSCJPG00005014777) EPDR1 (ENSCJPG00005014776) STARD3NL (ENSCJPG00005014775) MLH1 (ENSCJPG00005014774) TRANK1 (ENSCJPG00005014773) DCLK3 (ENSCJPG00005014771) STAC (ENSCJPG00005014768) ARPP21 (ENSCJPG00005014766) #18 ENSCJPG00005014758 CLASP2 (ENSCJPG00005005763) #21 UBP1 (ENSCJPG00005005738) #22 FBXL2 (ENSCJPG00005005598) #24 SUSD5 (ENSCJPG00005005569) #26 CRTAP (ENSCJPG00005005564) #27 TMPPE (ENSCJPG00005005561) GLB1 (ENSCJPG00005004538) #28 CCR4 (ENSCJPG00005004537) #29 CX3CR1 (ENSCJPG00005004535) ##29 ENSCJPG00005004532 ##29 SLC25A38 (ENSCJPG00005004530) ENSCJPG00005004526 TMC2 (ENSCJPG00005004506) ENSCJPG00005004481 ENSCJPG00005004480 ENSCJPG00005004479 EIF1B (ENSCJPG00005004478) Neognathae_b ANCESTRAL SPECIES 3 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00800000124177 ENSGT00990000210629 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 Passeriformes ANCESTRAL SPECIES ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00800000124177 ENSGT00990000210629 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00940000157738 ENSGT00940000155013 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT00440000033985 Great tit MODERN SPECIES 11 AOAH (ENSPMJG00000010976) ELMO1 (ENSPMJG00000010996) GPR141 (ENSPMJG00000011845) ENSPMJG00000011847 NME8 (ENSPMJG00000011848) SFRP4 (ENSPMJG00000011849) EPDR1 (ENSPMJG00000011850) STARD3NL (ENSPMJG00000011851) MLH1 (ENSPMJG00000011852) TRANK1 (ENSPMJG00000011854) DCLK3 (ENSPMJG00000011855) STAC (ENSPMJG00000011856) ARPP21 (ENSPMJG00000011857) #18 ENSPMJG00000011862 CLASP2 (ENSPMJG00000011882) #21 UBP1 (ENSPMJG00000018015) #22 FBXL2 (ENSPMJG00000018016) #24 SUSD5 (ENSPMJG00000018017) #26 CRTAP (ENSPMJG00000018018) #27 PDIA4 (ENSPMJG00000018019) EZH2 (ENSPMJG00000018023) CUL1 (ENSPMJG00000018024) CNTNAP2 (ENSPMJG00000018026) TPK1 (ENSPMJG00000018028) SEC61G (ENSPMJG00000018029) EGFR (ENSPMJG00000018030) LANCL2 (ENSPMJG00000018031) VOPP1 (ENSPMJG00000018032) BLVRA (ENSPMJG00000018033) HECW1 (ENSPMJG00000018034) STK17A (ENSPMJG00000018035) Passeriformes_d ANCESTRAL SPECIES ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00800000124177 ENSGT00990000210629 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00940000157738 ENSGT00940000155013 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT01040000241072 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT01030000235253.d.b Passeriformes_g ANCESTRAL SPECIES 6 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00800000124177 ENSGT00990000210629 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00940000157738 ENSGT00940000155013 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT01030000235253.d.b ENSGT00440000033985 Medium ground finch MODERN SPECIES 67 RCN1 (ENSGFOG00000012757) ENSGFOG00000012755 WT1 (ENSGFOG00000012744) EIF3M (ENSGFOG00000012731) EPDR1 (ENSGFOG00000012721) STARD3NL (ENSGFOG00000012713) MLH1 (ENSGFOG00000012634) TRANK1 (ENSGFOG00000012619) DCLK3 (ENSGFOG00000012614) STAC (ENSGFOG00000012606) ENSGFOG00000012600 ARPP21 (ENSGFOG00000012570) #18 ENSGFOG00000012563 CLASP2 (ENSGFOG00000012482) #21 UBP1 (ENSGFOG00000012440) #22 FBXL2 (ENSGFOG00000012436) #24 SUSD5 (ENSGFOG00000012435) #26 CRTAP (ENSGFOG00000012409) #27 PDIA4 (ENSGFOG00000012396) EZH2 (ENSGFOG00000012383) CUL1 (ENSGFOG00000012370) CNTNAP2 (ENSGFOG00000012219) TPK1 (ENSGFOG00000012174) SEC61G (ENSGFOG00000012170) Passeroidea ANCESTRAL SPECIES 6 ENSGT00940000155994 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00800000124177 ENSGT00990000210629 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00940000157738 ENSGT00940000155013 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00390000001319 ENSGT00940000155450 ENSGT00530000063186.b.a ENSGT00390000015821 ENSGT00390000011072 ENSGT01030000235253.d.b ENSGT00440000033985 Zebra finch MODERN SPECIES 12 ELMO1 (ENSTGUG00000005533) GPR141 (ENSTGUG00000005605) ENSTGUG00000021642 NME8 (ENSTGUG00000005610) SFRP4 (ENSTGUG00000028454) EPDR1 (ENSTGUG00000025037) STARD3NL (ENSTGUG00000005634) MLH1 (ENSTGUG00000005654) ENSTGUG00000020973 TRANK1 (ENSTGUG00000005694) DCLK3 (ENSTGUG00000027434) STAC (ENSTGUG00000001694) ARPP21 (ENSTGUG00000001697) #18 ENSTGUG00000001714 CLASP2 (ENSTGUG00000001731) #21 UBP1 (ENSTGUG00000001752) #22 FBXL2 (ENSTGUG00000001755) #24 SUSD5 (ENSTGUG00000001761) #26 CRTAP (ENSTGUG00000022421) #27 PDIA4 (ENSTGUG00000001769) EZH2 (ENSTGUG00000001770) CUL1 (ENSTGUG00000001790) CNTNAP2 (ENSTGUG00000001794) TPK1 (ENSTGUG00000001803) SEC61G (ENSTGUG00000021195) EGFR (ENSTGUG00000001806) LANCL2 (ENSTGUG00000020824) VOPP1 (ENSTGUG00000001812) BLVRA (ENSTGUG00000001814) ENSTGUG00000021649 COA1 (ENSTGUG00000022951) Common canary MODERN SPECIES 24 RECK (ENSSCAG00000015778) TGFBR1 (ENSSCAG00000015773) COL15A1 (ENSSCAG00000015735) TRIP13 (ENSSCAG00000015717) BRD9 (ENSSCAG00000015689) TPPP (ENSSCAG00000015680) SLC9A3 (ENSSCAG00000015674) LRRC14B (ENSSCAG00000015670) RAMP3 (ENSSCAG00000015668) ADCY1 (ENSSCAG00000015661) IGFBP1 (ENSSCAG00000015655) IGFBP3 (ENSSCAG00000015653) TNS3 (ENSSCAG00000015645) HUS1 (ENSSCAG00000015637) CLASP2 (ENSSCAG00000015626) #21 UBP1 (ENSSCAG00000015619) #22 FBXL2 (ENSSCAG00000015614) #24 SUSD5 (ENSSCAG00000015611) #26 CRTAP (ENSSCAG00000015609) #27 PDIA4 (ENSSCAG00000015603) EZH2 (ENSSCAG00000015590) CUL1 (ENSSCAG00000015578) CNTNAP2 (ENSSCAG00000015566) TPK1 (ENSSCAG00000015559) SEC61G (ENSSCAG00000015554) EGFR (ENSSCAG00000015542) LANCL2 (ENSSCAG00000015537) VOPP1 (ENSSCAG00000015531) BLVRA (ENSSCAG00000015527) ENSSCAG00000015524 COA1 (ENSSCAG00000015519) Flycatcher MODERN SPECIES 11 VOPP1 (ENSFALG00000026362) LANCL2 (ENSFALG00000026759) ENSFALG00000024233 EGFR (ENSFALG00000004982) SEC61G (ENSFALG00000023868) TPK1 (ENSFALG00000028596) ENSFALG00000027812 CNTNAP2 (ENSFALG00000010327) CUL1 (ENSFALG00000010318) EZH2 (ENSFALG00000010310) PDIA4 (ENSFALG00000010289) ENSFALG00000005162 #27 ENSFALG00000005152 #26 ENSFALG00000005126 CLASP2 (ENSFALG00000005035) #21 ENSFALG00000004962 #22 FBXL2 (ENSFALG00000004940) #24 STAC (ENSFALG00000002881) DCLK3 (ENSFALG00000002880) TRANK1 (ENSFALG00000002875) MLH1 (ENSFALG00000002856) STARD3NL (ENSFALG00000002843) EPDR1 (ENSFALG00000022868) SFRP4 (ENSFALG00000002829) NME8 (ENSFALG00000002824) GPR141 (ENSFALG00000002820) ENSFALG00000027025 ENSFALG00000025526 ANLN (ENSFALG00000002803) AOAH (ENSFALG00000002810) MATCAP2 (ENSFALG00000023520) Neognathae_c ANCESTRAL SPECIES 1 ENSGT01030000234518.E.c.a ENSGT01030000234518.E.c.b ENSGT00940000161182 ENSGT00940000160766 ENSGT00940000161910 ENSGT00940000155476 ENSGT00800000124177 ENSGT00990000210629 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 Golden eagle MODERN SPECIES 19 ULK4 (ENSACCG00020002310) TRAK1 (ENSACCG00020002075) CCK (ENSACCG00020002022) EIF1B (ENSACCG00020001996) ENSACCG00020001986 MYRIP (ENSACCG00020001950) TMC2 (ENSACCG00020001898) ENSACCG00020001848 SLC25A38 (ENSACCG00020001832) ENSACCG00020001816 ##29 CX3CR1 (ENSACCG00020001802) ##29 CCR4 (ENSACCG00020001796) #29 GLB1 (ENSACCG00020001779) #28 ENSACCG00020001763 CLASP2 (ENSACCG00020001539) #21 UBP1 (ENSACCG00020001350) #22 FBXL2 (ENSACCG00020001304) #24 SUSD5 (ENSACCG00020001291) #26 CRTAP (ENSACCG00020001274) #27 ARPP21 (ENSACCG00020001165) #18 STAC (ENSACCG00020001125) DCLK3 (ENSACCG00020001107) TRANK1 (ENSACCG00020001050) ENSACCG00020001002 MLH1 (ENSACCG00020000981) STARD3NL (ENSACCG00020000958) EPDR1 (ENSACCG00020000943) SFRP4 (ENSACCG00020000928) NME8 (ENSACCG00020000909) ENSACCG00020000888 GPR141 (ENSACCG00020000874) Kakapo MODERN SPECIES ENSSHBG00005017344 ELMO1 (ENSSHBG00005017368) ENSSHBG00005017986 NME8 (ENSSHBG00005017988) SFRP4 (ENSSHBG00005017991) EPDR1 (ENSSHBG00005017995) STARD3NL (ENSSHBG00005017997) MLH1 (ENSSHBG00005018021) TRANK1 (ENSSHBG00005018069) DCLK3 (ENSSHBG00005018075) STAC (ENSSHBG00005018081) ARPP21 (ENSSHBG00005018086) #18 ENSSHBG00005018097 ENSSHBG00005018099 CLASP2 (ENSSHBG00005018101) #21 UBP1 (ENSSHBG00005018105) #22 FBXL2 (ENSSHBG00005018107) #24 SUSD5 (ENSSHBG00005018111) #26 CRTAP (ENSSHBG00005018115) #27 ZNRF2 (ENSSHBG00005018118) NOD1 (ENSSHBG00005018121) GGCT (ENSSHBG00005018124) African ostrich MODERN SPECIES 770 LSM5 (ENSSCUG00000015401) PDE1C (ENSSCUG00000015427) PPP1R17 (ENSSCUG00000015449) ITPRID1 (ENSSCUG00000015453) NEUROD6 (ENSSCUG00000015459) ITGA9 (ENSSCUG00000015462) GOLGA4 (ENSSCUG00000015470) LRRFIP2 (ENSSCUG00000015485) MLH1 (ENSSCUG00000015497) TRANK1 (ENSSCUG00000015509) DCLK3 (ENSSCUG00000015516) STAC (ENSSCUG00000015519) ARPP21 (ENSSCUG00000015529) #18 ENSSCUG00000015591 CLASP2 (ENSSCUG00000015637) #21 UBP1 (ENSSCUG00000015684) #22 FBXL2 (ENSSCUG00000015696) #24 SUSD5 (ENSSCUG00000015702) #26 CRTAP (ENSSCUG00000015704) #27 TMPPE (ENSSCUG00000015707) GLB1 (ENSSCUG00000015708) #28 CCR4 (ENSSCUG00000015711) #29 CX3CR1 (ENSSCUG00000015713) ##29 Australian saltwater crocodile MODERN SPECIES PPP1R17 (ENSCPRG00005009929) ITPRID1 (ENSCPRG00005009927) NEUROD6 (ENSCPRG00005009885) ITGA9 (ENSCPRG00005009875) GOLGA4 (ENSCPRG00005009655) LRRFIP2 (ENSCPRG00005009593) MLH1 (ENSCPRG00005009455) TRANK1 (ENSCPRG00005009411) DCLK3 (ENSCPRG00005009401) STAC (ENSCPRG00005009362) ENSCPRG00005009333 ARPP21 (ENSCPRG00005009322) #18 ENSCPRG00005009266 ENSCPRG00005009242 CLASP2 (ENSCPRG00005009194) #21 UBP1 (ENSCPRG00005008890) #22 ENSCPRG00005008864 #24 ENSCPRG00005008862 #24 SUSD5 (ENSCPRG00005008813) #26 CRTAP (ENSCPRG00005008807) #27 GLB1 (ENSCPRG00005008799) #28 CCR4 (ENSCPRG00005008797) #29 CX3CR1 (ENSCPRG00005008767) ##29 ENSCPRG00005008765 ##29 ENSCPRG00005008764 SLC25A38 (ENSCPRG00005008761) ENSCPRG00005008756 TMC2 (ENSCPRG00005008752) MYRIP (ENSCPRG00005008721) ENSCPRG00005008684 EIF1B (ENSCPRG00005008683) Cryptodira ANCESTRAL SPECIES 4 ENSGT00390000009586 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00390000010260 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B.c ##29 ENSGT00940000164532 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 Testudinoidea ANCESTRAL SPECIES 8 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B.c ##29 ENSGT00940000164532 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 ENSGT00390000003571 Testudinidae ANCESTRAL SPECIES 1 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B.c ##29 ENSGT00940000164532 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 ENSGT00390000003571 Abingdon island giant tortoise MODERN SPECIES 2059 ARPP21 (ENSCABG00000022817) #18 ENSCABG00000022815 ENSCABG00000022812 ENSCABG00000022810 CLASP2 (ENSCABG00000022002) #21 UBP1 (ENSCABG00000021855) #22 FBXL2 (ENSCABG00000021853) #24 SUSD5 (ENSCABG00000021852) #26 CRTAP (ENSCABG00000021851) #27 Goode s thornscrub tortoise MODERN SPECIES 11 ENSGEVG00005008364 PDE1C (ENSGEVG00005008315) PPP1R17 (ENSGEVG00005008284) ITPRID1 (ENSGEVG00005008238) NEUROD6 (ENSGEVG00005008226) ITGA9 (ENSGEVG00005007976) GOLGA4 (ENSGEVG00005007851) LRRFIP2 (ENSGEVG00005007812) MLH1 (ENSGEVG00005007779) TRANK1 (ENSGEVG00005007646) DCLK3 (ENSGEVG00005007528) STAC (ENSGEVG00005007453) ARPP21 (ENSGEVG00005007143) #18 ENSGEVG00005006936 CLASP2 (ENSGEVG00005006619) #21 UBP1 (ENSGEVG00005006457) #22 FBXL2 (ENSGEVG00005006159) #24 SUSD5 (ENSGEVG00005006099) #26 CRTAP (ENSGEVG00005006056) #27 GLB1 (ENSGEVG00005005944) #28 CCR4 (ENSGEVG00005005922) #29 CX3CR1 (ENSGEVG00005005902) ##29 ENSGEVG00005005881 ##29 ENSGEVG00005005850 SLC25A38 (ENSGEVG00005005829) ENSGEVG00005005790 TMC2 (ENSGEVG00005005665) ENSGEVG00005005611 ENSGEVG00005005596 EIF1B (ENSGEVG00005005572) CCK (ENSGEVG00005005553) Emydidae ANCESTRAL SPECIES 40 ENSGT00390000001455 ENSGT00940000155331.A ENSGT00390000005586 ENSGT00940000161762 ENSGT00940000159827 ENSGT00940000156503 ENSGT00730000111139 ENSGT00530000063564.a ENSGT00800000124177 ENSGT00940000153370.b ENSGT00940000159476 ENSGT00950000183092.b.b ENSGT00940000160796 #18 ENSGT00940000163083 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00950000182942.a.a #28 ENSGT01020000230359.C.b #29 ENSGT01020000230359.A ##29 ENSGT01020000230359.B.c.e ##29 ENSGT00940000164532 ENSGT00550000075117 ENSGT00950000183099.v ENSGT01050000244942.b.a.b ENSGT00950000183138.a.a.b ENSGT00390000005489.b ENSGT00940000160239 ENSGT00390000003571 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 2238 ENSTMTG00000009438 ENSTMTG00000009427 ENSTMTG00000009416 ENSTMTG00000009409 ENSTMTG00000009388 ENSTMTG00000009099 ENSTMTG00000008982 ENSTMTG00000008959 ENSTMTG00000008791 ENSTMTG00000008744 ENSTMTG00000008719 ENSTMTG00000020540 ENSTMTG00000020448 #18 ENSTMTG00000020379 ENSTMTG00000015829 #21 ENSTMTG00000015409 #22 ENSTMTG00000015330 #24 ENSTMTG00000015302 #26 CRTAP (ENSTMTG00000015296) #27 Three-toed box turtle MODERN SPECIES 2239 ENSTMTG00000022861 ENSTMTG00000022858 ENSTMTG00000022857 ENSTMTG00000022855 ENSTMTG00000022851 ENSTMTG00000022844 ENSTMTG00000022842 ENSTMTG00000022840 ENSTMTG00000022836 ENSTMTG00000022821 ENSTMTG00000022816 ENSTMTG00000022807 ENSTMTG00000022795 #18 ENSTMTG00000022782 ENSTMTG00000015818 #21 ENSTMTG00000014079 #22 ENSTMTG00000014006 #24 ENSTMTG00000013992 ENSTMTG00000013975 #26 painted turtle MODERN SPECIES 760 LSM5 (ENSCPBG00000013685) PDE1C (ENSCPBG00000013665) PPP1R17 (ENSCPBG00000013658) ITPRID1 (ENSCPBG00000013648) NEUROD6 (ENSCPBG00000013640) ITGA9 (ENSCPBG00000013620) GOLGA4 (ENSCPBG00000013597) LRRFIP2 (ENSCPBG00000013573) MLH1 (ENSCPBG00000013555) TRANK1 (ENSCPBG00000013529) DCLK3 (ENSCPBG00000013524) STAC (ENSCPBG00000013521) ARPP21 (ENSCPBG00000013513) #18 ENSCPBG00000013501 CLASP2 (ENSCPBG00000013429) #21 UBP1 (ENSCPBG00000013401) #22 FBXL2 (ENSCPBG00000013396) #24 Chinese turtle MODERN SPECIES 985 CLASP2 (ENSPSIG00000003459) #21 UBP1 (ENSPSIG00000003763) #22 ENSPSIG00000003806 #24 ENSPSIG00000003824 #24 ENSPSIG00000001201 SUSD5 (ENSPSIG00000003834) #26 CRTAP (ENSPSIG00000003851) #27 TMPPE (ENSPSIG00000001227) GLB1 (ENSPSIG00000003914) #28 CCR4 (ENSPSIG00000001244) #29 ENSPSIG00000001280 CX3CR1 (ENSPSIG00000001297) ##29 ENSPSIG00000004101 ENSPSIG00000001322 ##29 ENSPSIG00000004121 SLC25A38 (ENSPSIG00000004137) ENSPSIG00000004173 Anura ANCESTRAL SPECIES 444 ENSGT00940000156148 #22 ENSGT00390000009163 #26 ENSGT00950000182942.a.a #28 Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000010880 ENSLLEG00000014726 ENSLLEG00000014754 ENSLLEG00000014801 ENSLLEG00000014839 ENSLLEG00000014875 ENSLLEG00000014891 ENSLLEG00000014963 FIGNL1 (ENSLLEG00000015005) CLASP2 (ENSLLEG00000015143) #21 ENSLLEG00000017020 ENSLLEG00000017060 ENSLLEG00000017115 ENSLLEG00000017137 ENSLLEG00000017157 UBP1 (ENSLLEG00000017214) #22 ENSLLEG00000017865 #26 GLB1 (ENSLLEG00000017988) #28 ENSLLEG00000018860 ENSLLEG00000018883 ENSLLEG00000018913 CXCR6 (ENSLLEG00000018936) FYCO1 (ENSLLEG00000019045) ENSLLEG00000019469 ENSLLEG00000019515 ENSLLEG00000019539 ENSLLEG00000019573 ENSLLEG00000019587 ENSLLEG00000019602 ENSLLEG00000019624 ENSLLEG00000019693 ##29 Coelacanth MODERN SPECIES 2524 CLASP2 (ENSLACG00000005194) #21 UBP1 (ENSLACG00000000718) #22 Actinopterygii ANCESTRAL SPECIES 282 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00940000157125 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00530000063023.B ENSGT00940000158741 ENSGT00390000017671.a ENSGT00940000178110 Reedfish MODERN SPECIES 4 dctn3 (ENSECRG00000018482) ADGRB1 (ENSECRG00000018521) ENSECRG00000018630 ENSECRG00000018675 ENSECRG00000018724 ENSECRG00000018769 ENSECRG00000018851 ENSECRG00000018869 ENSECRG00000018895 herpud2 (ENSECRG00000018938) tbx20 (ENSECRG00000018999) dpy19l1l (ENSECRG00000019035) bmper (ENSECRG00000019130) BBS9 (ENSECRG00000019165) clasp2 (ENSECRG00000019296) #21 ubp1 (ENSECRG00000019787) #22 fbxl2 (ENSECRG00000019863) #24 SUSD5 (ENSECRG00000019915) #26 crtap (ENSECRG00000019938) #27 fkbp9 (ENSECRG00000019961) nt5c3a (ENSECRG00000019986) pdcd6ip (ENSECRG00000020029) ARPP21 (ENSECRG00000020077) #18 STAC (ENSECRG00000020126) DCLK3 (ENSECRG00000020156) TRANK1 (ENSECRG00000020183) MLH1 (ENSECRG00000020228) ENSECRG00000020245 CSMD3 (ENSECRG00000020311) trps1 (ENSECRG00000020383) eif3ha (ENSECRG00000020438) Neopterygii ANCESTRAL SPECIES 23 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000153845.a.b #24 ENSGT00390000009163 #26 ENSGT00940000153814.a #27 ENSGT00940000157125 ENSGT00390000012959.b ENSGT00390000000803 ENSGT00940000156485 ENSGT00530000063023.B ENSGT00940000158741 ENSGT00390000017671.a ENSGT00940000178110 ENSGT00940000157045 ENSGT00940000158728 ENSGT00940000157527 ENSGT00940000158391 Spotted gar MODERN SPECIES 649 eny2 (ENSLOCG00000003051) PKHD1L1 (ENSLOCG00000003007) ebag9 (ENSLOCG00000002958) sybu (ENSLOCG00000002949) gdf6a (ENSLOCG00000002936) gmpr (ENSLOCG00000002927) atxn1a (ENSLOCG00000002910) fam8a1b (ENSLOCG00000002898) fabp4b (ENSLOCG00000002881) mrpl53 (ENSLOCG00000002871) ENSLOCG00000002856 znf704 (ENSLOCG00000002837) tpd52 (ENSLOCG00000002803) zbtb10 (ENSLOCG00000002796) clasp2 (ENSLOCG00000002740) #21 UBP1 (ENSLOCG00000002718) #22 fbxl2 (ENSLOCG00000002704) #24 SUSD5 (ENSLOCG00000002694) #26 crtap (ENSLOCG00000002668) #27 fkbp9 (ENSLOCG00000002630) nt5c3a (ENSLOCG00000002600) BBS9 (ENSLOCG00000002553) bmper (ENSLOCG00000002531) dpy19l1l (ENSLOCG00000002508) tbx20 (ENSLOCG00000002483) herpud2 (ENSLOCG00000002473) SLC4A7 (ENSLOCG00000002412) eomesb (ENSLOCG00000002398) cmc1 (ENSLOCG00000002385) azi2 (ENSLOCG00000002349) rbms3 (ENSLOCG00000002328) Osteoglossocephalai ANCESTRAL SPECIES 25 ENSGT00940000172951 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000160796 #18 ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 Osteoglossiformes ANCESTRAL SPECIES 1 ENSGT00410000025596.a.b.b ENSGT00940000159933.g.b ENSGT00940000165224.a.a.l ENSGT00940000156115.c.c ENSGT00940000153212 ENSGT00940000170872 ENSGT00940000164175.b ENSGT00940000159342.a.a ENSGT00940000172951 ENSGT00940000157125.j ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C.e #21 ENSGT00940000156148 #22 ENSGT00940000163083.m ENSGT00940000160796 #18 ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 P. kingsleyae MODERN SPECIES 72 foxo6b (ENSPKIG00000011612) ppp1r8a (ENSPKIG00000011577) ENSPKIG00000011552 ENSPKIG00000011536 ENSPKIG00000011522 ENSPKIG00000011509 ENSPKIG00000011461 fam83hb (ENSPKIG00000011416) ENSPKIG00000011395 fkbp9 (ENSPKIG00000011376) crtap (ENSPKIG00000011340) #27 ENSPKIG00000011308 #26 fbxl2 (ENSPKIG00000011241) #24 ENSPKIG00000011209 clasp2 (ENSPKIG00000011150) #21 ubp1 (ENSPKIG00000011105) #22 pdcd6ip (ENSPKIG00000011051) ENSPKIG00000011035 ENSPKIG00000011024 ARPP21 (ENSPKIG00000010891) #18 cyhr1 (ENSPKIG00000010818) DCLK3 (ENSPKIG00000010804) fabp3 (ENSPKIG00000010776) zcchc17 (ENSPKIG00000010742) snrnp40 (ENSPKIG00000010709) nkain1 (ENSPKIG00000010673) pum1 (ENSPKIG00000010578) ENSPKIG00000010535 SDC3 (ENSPKIG00000010522) ENSPKIG00000010479 ENSPKIG00000010428 Asian bonytongue MODERN SPECIES 15 ENSSFOG00015031959 PTPRU (ENSSFOG00015020557) gmeb1 (ENSSFOG00015020698) rab42a (ENSSFOG00015020732) foxo6b (ENSSFOG00015024321) ppp1r8a (ENSSFOG00015020758) ugt2a6 (ENSSFOG00015020780) ENSSFOG00015020881 fam83hb (ENSSFOG00015020932) ENSSFOG00015020940 fkbp9 (ENSSFOG00015020951) crtap (ENSSFOG00015028221) #27 ENSSFOG00015026417 #26 fbxl2 (ENSSFOG00015020987) #24 clasp2 (ENSSFOG00015021026) #21 ubp1 (ENSSFOG00015021198) #22 pdcd6ip (ENSSFOG00015021211) ARPP21 (ENSSFOG00015021262) #18 cyhr1 (ENSSFOG00015031227) DCLK3 (ENSSFOG00015024444) fabp3 (ENSSFOG00015021320) zcchc17 (ENSSFOG00015021334) snrnp40 (ENSSFOG00015021344) nkain1 (ENSSFOG00015021363) pum1 (ENSSFOG00015021412) SDC3 (ENSSFOG00015026152) ENSSFOG00015026177 ENSSFOG00015021457 matn1 (ENSSFOG00015021478) sesn2 (ENSSFOG00015021495) yrk (ENSSFOG00015021516) Clupeocephala ANCESTRAL SPECIES 219 ENSGT00940000172951 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000155462.ab Otomorpha ANCESTRAL SPECIES 241 ENSGT00940000163923 ENSGT00940000160932 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 Otophysi ANCESTRAL SPECIES 39 ENSGT00740000116913 ENSGT00950000182907.a.a.ic.a ENSGT00530000063760.b.g.b ENSGT00550000075028 ENSGT00940000162345.c.b ENSGT00940000163854.a.b ENSGT00390000000698 ENSGT00940000163923 ENSGT00940000160932 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476.j ENSGT00940000159476.i ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 ENSGT00950000183168.B.a Characiphysae ANCESTRAL SPECIES 10 ENSGT00950000182907.a.a.ic.a ENSGT00530000063760.b.g.b ENSGT00550000075028 ENSGT00940000162345.c.b ENSGT00940000163854.a.b ENSGT00390000000698 ENSGT00940000164843.b ENSGT00940000163923 ENSGT00940000160932 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476.j ENSGT00940000159476.i ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 ENSGT00950000183168.B.a Channel catfish MODERN SPECIES 16 cart4 (ENSIPUG00000021288) anp32e (ENSIPUG00000021277) plekho1a (ENSIPUG00000021268) vps45 (ENSIPUG00000021211) zgc:153441 (ENSIPUG00000021200) pogza (ENSIPUG00000021181) psmb4 (ENSIPUG00000021163) ENSIPUG00000021152 si:dkey-228a15.1 (ENSIPUG00000021138) sytl1 (ENSIPUG00000021122) fkbp9 (ENSIPUG00000021107) CRTAP (ENSIPUG00000021081) #27 susd5 (ENSIPUG00000021074) #26 fbxl2 (ENSIPUG00000021044) #24 clasp2 (ENSIPUG00000020723) #21 ubp1 (ENSIPUG00000020657) #22 pdcd6ip (ENSIPUG00000020591) ENSIPUG00000020552 cyhr1 (ENSIPUG00000020546) ENSIPUG00000020535 ENSIPUG00000020530 fabp3 (ENSIPUG00000020525) zcchc17 (ENSIPUG00000020511) snrnp40 (ENSIPUG00000020472) nkain1 (ENSIPUG00000020456) pum1 (ENSIPUG00000020421) sdc3 (ENSIPUG00000020392) nobox (ENSIPUG00000020371) LAPTM4A (ENSIPUG00000020348) matn1 (ENSIPUG00000020337) sesn2 (ENSIPUG00000020323) Characiphysae_b ANCESTRAL SPECIES 1 ENSGT00950000182907.a.a.ic.a ENSGT00530000063760.b.g.b ENSGT00550000075028 ENSGT00940000162345.c.b ENSGT00940000163854.a.b ENSGT00390000000698 ENSGT00940000164843.b ENSGT00940000163923 ENSGT00940000160932 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476.j ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00950000182962.b.a Characoidei ANCESTRAL SPECIES 3 ENSGT00950000182907.a.a.ic.a ENSGT00530000063760.b.g.b ENSGT00550000075028 ENSGT00940000162345.c.b ENSGT00940000163854.a.b ENSGT00390000000698 ENSGT00940000164843.b ENSGT00940000163923 ENSGT00940000160932 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476.j ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00950000182962.b.a Red-bellied piranha MODERN SPECIES 1 anp32e (ENSPNAG00000006560) plekho1a (ENSPNAG00000028268) vps45 (ENSPNAG00000028257) zgc:153441 (ENSPNAG00000028176) pogza (ENSPNAG00000028135) psmb4 (ENSPNAG00000028094) ENSPNAG00000028062 si:dkey-228a15.1 (ENSPNAG00000027998) sytl1 (ENSPNAG00000027953) fkbp9 (ENSPNAG00000006917) crtap (ENSPNAG00000005901) #27 ENSPNAG00000005380 #26 fbxl2 (ENSPNAG00000027462) #24 ENSPNAG00000006481 clasp2 (ENSPNAG00000027362) #21 ubp1 (ENSPNAG00000027222) #22 pdcd6ip (ENSPNAG00000027171) ENSPNAG00000004162 cyhr1 (ENSPNAG00000005034) DCLK3 (ENSPNAG00000026847) fabp3 (ENSPNAG00000004117) zcchc17 (ENSPNAG00000026780) snrnp40 (ENSPNAG00000026769) nkain1 (ENSPNAG00000026733) pum1 (ENSPNAG00000026728) SDC3 (ENSPNAG00000007081) ENSPNAG00000026558 ENSPNAG00000026544 matn1 (ENSPNAG00000007138) sesn2 (ENSPNAG00000006738) yrk (ENSPNAG00000004051) Mexicana tetra MODERN SPECIES 15 cart4 (ENSAMXG00000042725) si:ch211-191i18.2 (ENSAMXG00000032211) anp32e (ENSAMXG00000020504) vps45 (ENSAMXG00000020513) zgc:153441 (ENSAMXG00000020517) pogza (ENSAMXG00000020522) psmb4 (ENSAMXG00000020525) ENSAMXG00000020532 si:dkey-228a15.1 (ENSAMXG00000032047) sytl1 (ENSAMXG00000031491) fkbp9 (ENSAMXG00000020542) crtap (ENSAMXG00000020548) #27 ENSAMXG00000020553 #26 fbxl2 (ENSAMXG00000042893) #24 clasp2 (ENSAMXG00000020565) #21 ubp1 (ENSAMXG00000020575) #22 pdcd6ip (ENSAMXG00000020580) ENSAMXG00000020587 cyhr1 (ENSAMXG00000020589) ENSAMXG00000032506 ENSAMXG00000036806 fabp3 (ENSAMXG00000042510) zcchc17 (ENSAMXG00000020595) snrnp40 (ENSAMXG00000020599) nkain1 (ENSAMXG00000042549) pum1 (ENSAMXG00000020607) SDC3 (ENSAMXG00000020610) ENSAMXG00000037645 ENSAMXG00000037364 matn1 (ENSAMXG00000020612) sesn2 (ENSAMXG00000020616) Electric eel MODERN SPECIES 37 ubp1 (ENSEEEG00000007583) #22 pdcd6ip (ENSEEEG00000007746) ENSEEEG00000007750 cyhr1 (ENSEEEG00000007751) ENSEEEG00000007752 fabp3 (ENSEEEG00000007764) atoh1a (ENSEEEG00000007767) grid2 (ENSEEEG00000007769) CCSER1 (ENSEEEG00000007776) trim36 (ENSEEEG00000007779) pggt1b (ENSEEEG00000007780) CCDC112 (ENSEEEG00000007784) fem1c (ENSEEEG00000007787) tmed7 (ENSEEEG00000007790) cdo1 (ENSEEEG00000007791) AP3S1 (ENSEEEG00000007792) Cyprinoidei ANCESTRAL SPECIES 15 ENSGT00950000182907.a.a.ic.a ENSGT00530000063760.b.g.b ENSGT00550000075028 ENSGT00940000162345.c.b ENSGT00940000163854.a.b ENSGT00390000000698 ENSGT00940000164843.b ENSGT00940000163923.c ENSGT00940000163923.d ENSGT00940000160932 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000156095.n ENSGT00390000018258 ENSGT00940000159476.j.b ENSGT00940000159476.i ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638.g ENSGT00950000183168.B.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 97 ENSGT00740000116913 ENSGT00950000182907.a.a.ic.a.c ENSGT00530000063760.b.g.b.b ENSGT00550000075028.b ENSGT00940000162345.c.b.d ENSGT00940000163854.a.b.c ENSGT00390000000698.a ENSGT00940000163923.c.a ENSGT00940000163923.d ENSGT00940000160932.f ENSGT00940000157125.h ENSGT00940000153814.a.h #27 ENSGT00390000009163.h #26 ENSGT00940000153845.a.b.d #24 ENSGT00940000155574.C.p #21 ENSGT00940000156148.a #22 ENSGT00940000163083.g ENSGT00940000156095.n.a ENSGT00390000018258.n ENSGT00940000159476.j.b ENSGT00940000159476.i ENSGT00940000155104.i ENSGT00510000047363.ec ENSGT00940000155058.r ENSGT00940000159949.d ENSGT00940000158079.a ENSGT00940000160209.a ENSGT00650000093445.d ENSGT00940000175786.a ENSGT00940000159638.g.a ENSGT00950000183168.B.a.a Goldfish MODERN SPECIES 38 KCNQ4 (ENSCARG00000048479) jtb (ENSCARG00000048500) si:ch211-191i18.4 (ENSCARG00000048519) cart4 (ENSCARG00000048536) si:ch211-191i18.2 (ENSCARG00000048557) anp32e (ENSCARG00000048578) plekho1a (ENSCARG00000048649) vps45 (ENSCARG00000048965) psmb4 (ENSCARG00000052384) zgc:110239 (ENSCARG00000052467) fkbp9 (ENSCARG00000052586) crtap (ENSCARG00000052603) #27 ENSCARG00000052628 #26 fbxl2 (ENSCARG00000052662) #24 clasp2 (ENSCARG00000053032) #21 ubp1 (ENSCARG00000060341) #22 pdcd6ip (ENSCARG00000064352) ENSCARG00000065429 cyhr1 (ENSCARG00000065469) FABP-3 (ENSCARG00000065484) zcchc17 (ENSCARG00000065499) snrnp40 (ENSCARG00000065518) nkain1 (ENSCARG00000065536) pum1 (ENSCARG00000065574) SDC3 (ENSCARG00000065809) ENSCARG00000065818 ENSCARG00000065824 matn1 (ENSCARG00000065836) sesn2 (ENSCARG00000018320) yrk (ENSCARG00000018346) AHDC1 (ENSCARG00000018410) Cyprininae_a ANCESTRAL SPECIES 124 ENSGT00740000116913 ENSGT00950000182907.a.a.ic.a.c ENSGT00530000063760.b.g.b.b ENSGT00550000075028.b ENSGT00940000162345.c.b.d ENSGT00940000163854.a.b.c ENSGT00390000000698.a ENSGT00940000163923.c.a ENSGT00940000163923.d.a ENSGT00940000160932.f ENSGT00940000157125.h ENSGT00940000153814.a.h #27 ENSGT00390000009163.g.b #26 ENSGT00940000153845.a.b.d #24 ENSGT00940000155574.C.p #21 ENSGT00940000156148.a #22 ENSGT00940000163083.g ENSGT00940000156095.n.a ENSGT00390000018258.n ENSGT00940000159476.j.b ENSGT00940000159476.i ENSGT00940000155104.i ENSGT00510000047363.ec ENSGT00940000155058.r ENSGT00940000159949.d ENSGT00940000158079.a ENSGT00940000160209.a ENSGT00650000093445.d ENSGT00940000175786.a ENSGT00940000159638.g.a ENSGT00950000183168.B.a.a Common carp reference MODERN SPECIES 31 cart4 (ENSCCRG00000040166) si:ch211-191i18.2 (ENSCCRG00000081734) anp32e (ENSCCRG00000056899) plekho1a (ENSCCRG00000066890) vps45 (ENSCCRG00000026127) pogza (ENSCCRG00000044068) psmb4 (ENSCCRG00000044045) zgc:110239 (ENSCCRG00000002891) ENSCCRG00000081507 sytl1 (ENSCCRG00000035579) fkbp9 (ENSCCRG00000058661) crtap (ENSCCRG00000001962) #27 ENSCCRG00000072043 #26 fbxl2 (ENSCCRG00000002255) #24 clasp2 (ENSCCRG00000055976) #21 ubp1 (ENSCCRG00000042284) #22 pdcd6ip (ENSCCRG00000041357) ENSCCRG00000050861 cyhr1 (ENSCCRG00000072599) ENSCCRG00000079492 ENSCCRG00000050856 fabp3 (ENSCCRG00000050853) zcchc17 (ENSCCRG00000050846) snrnp40 (ENSCCRG00000079296) pum1 (ENSCCRG00000050733) SDC3 (ENSCCRG00000042010) ENSCCRG00000050201 ENSCCRG00000081784 matn1 (ENSCCRG00000079213) sesn2 (ENSCCRG00000031091) yrk (ENSCCRG00000061987) Golden-line barbel MODERN SPECIES 143 jtb (ENSSGRG00000000227) si:ch211-191i18.4 (ENSSGRG00000000231) cart4 (ENSSGRG00000000236) si:ch211-191i18.2 (ENSSGRG00000000239) anp32e (ENSSGRG00000000249) plekho1a (ENSSGRG00000000266) vps45 (ENSSGRG00000000381) zgc:153441 (ENSSGRG00000000737) pogza (ENSSGRG00000000740) psmb4 (ENSSGRG00000000741) zgc:110239 (ENSSGRG00000000783) fkbp9 (ENSSGRG00000000792) crtap (ENSSGRG00000000939) #27 fbxl2 (ENSSGRG00000000940) #24 clasp2 (ENSSGRG00000001095) #21 ubp1 (ENSSGRG00000014216) #22 pdcd6ip (ENSSGRG00000014905) ENSSGRG00000014977 cyhr1 (ENSSGRG00000014978) DCLK3 (ENSSGRG00000014979) fabp3 (ENSSGRG00000014983) zcchc17 (ENSSGRG00000014987) snrnp40 (ENSSGRG00000014990) nkain1 (ENSSGRG00000015064) pum1 (ENSSGRG00000015138) SDC3 (ENSSGRG00000018132) ENSSGRG00000018133 ENSSGRG00000018134 matn1 (ENSSGRG00000018135) yrk (ENSSGRG00000018208) AHDC1 (ENSSGRG00000023178) Cyprininae ANCESTRAL SPECIES 59 ENSGT00390000018319.b.b.a ENSGT00950000182907.a.a.ic.a.d ENSGT00530000063760.b.g.b.a ENSGT00550000075028.a ENSGT00940000162345.c.b.c ENSGT00940000163854.a.b.d ENSGT00390000000698.b ENSGT00940000164843.b.h ENSGT00940000163923.c.b ENSGT00940000160932.e ENSGT00940000157125.g ENSGT00940000153814.a.g #27 ENSGT00390000009163.g.a #26 ENSGT00940000153845.a.b.c #24 ENSGT00940000155574.C.o #21 ENSGT00940000156148.b #22 ENSGT00940000163083.h ENSGT00940000156095.n.b ENSGT00390000018258.m ENSGT00940000159476.j.a ENSGT00940000155104.j ENSGT00510000047363.fc ENSGT00940000155058.q ENSGT00940000159949.c ENSGT00940000158079.b ENSGT00940000160209.b ENSGT00650000093445.c ENSGT00940000175786.b ENSGT00940000159638.g.b ENSGT00950000183168.B.a.b ENSGT00940000157554.s.b Goldfish MODERN SPECIES 10 si:ch211-191i18.2 (ENSCARG00000046727) ENSCARG00000046663 plekho1a (ENSCARG00000046622) vps45 (ENSCARG00000045242) zgc:153441 (ENSCARG00000045183) pogza (ENSCARG00000045129) psmb4 (ENSCARG00000044987) ENSCARG00000044928 zgc:110239 (ENSCARG00000044749) sytl1 (ENSCARG00000044689) fkbp9 (ENSCARG00000044147) crtap (ENSCARG00000044077) #27 ENSCARG00000044060 #26 fbxl2 (ENSCARG00000043901) #24 clasp2 (ENSCARG00000033627) #21 ubp1 (ENSCARG00000031869) #22 pdcd6ip (ENSCARG00000029920) ENSCARG00000029843 ENSCARG00000029833 cyhr1 (ENSCARG00000029823) DCLK3 (ENSCARG00000029807) fabp3 (ENSCARG00000029792) zcchc17 (ENSCARG00000029769) snrnp40 (ENSCARG00000029636) nkain1 (ENSCARG00000029596) pum1 (ENSCARG00000029238) ENSCARG00000029181 ENSCARG00000029176 matn1 (ENSCARG00000029150) sesn2 (ENSCARG00000029114) yrk (ENSCARG00000028409) Cyprininae_a ANCESTRAL SPECIES 1 ENSGT00950000182907.a.a.ic.a.d ENSGT00530000063760.b.g.b.a ENSGT00550000075028.a ENSGT00940000162345.c.b.c ENSGT00940000163854.a.b.d ENSGT00390000000698.b ENSGT00940000164843.b.h ENSGT00940000163923.c.b ENSGT00940000163923.d.b ENSGT00940000160932.e ENSGT00940000157125.g ENSGT00940000153814.a.g #27 ENSGT00390000009163.g.a #26 ENSGT00940000153845.a.b.c #24 ENSGT00940000155574.C.o #21 ENSGT00940000156148.b #22 ENSGT00940000163083.h ENSGT00940000156095.n.b ENSGT00390000018258.m ENSGT00940000159476.j.a ENSGT00940000155104.j ENSGT00510000047363.fc ENSGT00940000155058.q ENSGT00940000159949.c ENSGT00940000158079.b ENSGT00940000160209.b ENSGT00650000093445.c ENSGT00940000175786.b ENSGT00940000159638.g.b ENSGT00950000183168.B.a.b ENSGT00940000157554.s.b Golden-line barbel MODERN SPECIES 172 ENSSGRG00000041951 anp32e (ENSSGRG00000041952) plekho1a (ENSSGRG00000041968) vps45 (ENSSGRG00000042003) zgc:153441 (ENSSGRG00000042738) pogza (ENSSGRG00000042741) psmb4 (ENSSGRG00000042745) ENSSGRG00000042784 zgc:110239 (ENSSGRG00000042785) sytl1 (ENSSGRG00000042790) fkbp9 (ENSSGRG00000042792) crtap (ENSSGRG00000042826) #27 ENSSGRG00000042827 #26 fbxl2 (ENSSGRG00000042830) #24 clasp2 (ENSSGRG00000042883) #21 ubp1 (ENSSGRG00000045392) #22 pdcd6ip (ENSSGRG00000045411) ENSSGRG00000045526 cyhr1 (ENSSGRG00000045527) ENSSGRG00000045528 ENSSGRG00000045529 fabp3 (ENSSGRG00000045530) zcchc17 (ENSSGRG00000045534) snrnp40 (ENSSGRG00000045535) nkain1 (ENSSGRG00000045553) pum1 (ENSSGRG00000045643) SDC3 (ENSSGRG00000047524) ENSSGRG00000047526 ENSSGRG00000047527 matn1 (ENSSGRG00000047529) sesn2 (ENSSGRG00000047531) Common carp reference MODERN SPECIES 12 anp32e (ENSCCRG00000072614) plekho1a (ENSCCRG00000051586) vps45 (ENSCCRG00000003059) zgc:153441 (ENSCCRG00000056157) pogza (ENSCCRG00000065504) psmb4 (ENSCCRG00000055225) ENSCCRG00000002902 zgc:110239 (ENSCCRG00000068735) ENSCCRG00000051612 sytl1 (ENSCCRG00000051613) fkbp9 (ENSCCRG00000002002) crtap (ENSCCRG00000062249) #27 ENSCCRG00000059505 #26 fbxl2 (ENSCCRG00000051455) #24 clasp2 (ENSCCRG00000061111) #21 ubp1 (ENSCCRG00000047174) #22 pdcd6ip (ENSCCRG00000042173) ENSCCRG00000042036 cyhr1 (ENSCCRG00000050859) ENSCCRG00000057137 ENSCCRG00000071079 fabp3 (ENSCCRG00000050276) zcchc17 (ENSCCRG00000050274) snrnp40 (ENSCCRG00000050273) nkain1 (ENSCCRG00000050272) pum1 (ENSCCRG00000050210) SDC3 (ENSCCRG00000050207) ENSCCRG00000075270 ENSCCRG00000050193 matn1 (ENSCCRG00000050188) yrk (ENSCCRG00000028075) Zebrafish MODERN SPECIES 10 zgc:153441 (ENSDARG00000054797) pogza (ENSDARG00000054778) psmb4 (ENSDARG00000054696) ENSDARG00000054690 zgc:110239 (ENSDARG00000077664) zgc:123103 (ENSDARG00000099200) ENSDARG00000035665 si:dkey-228a15.1 (ENSDARG00000095698) zgc:103438 (ENSDARG00000035663) sytl1 (ENSDARG00000070094) fkbp9 (ENSDARG00000005023) crtap (ENSDARG00000018010) #27 ENSDARG00000088277 #26 fbxl2 (ENSDARG00000012135) #24 clasp2 (ENSDARG00000020345) #21 ubp1 (ENSDARG00000018000) #22 pdcd6ip (ENSDARG00000025269) ENSDARG00000061081 cyhr1 (ENSDARG00000061057) DCLK3 (ENSDARG00000078997) fabp3 (ENSDARG00000023290) zcchc17 (ENSDARG00000018936) snrnp40 (ENSDARG00000023160) nkain1 (ENSDARG00000006859) pum1 (ENSDARG00000099256) eef1a1l1 (ENSDARG00000020850) ENSDARG00000109996 gnrhr1 (ENSDARG00000100593) DGKD (ENSDARG00000113111) ENSDARG00000101785 matn1 (ENSDARG00000030215) Euteleosteomorpha ANCESTRAL SPECIES 83 ENSGT00940000172951 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00990000210357 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT01000000220517 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000155462.ab Protacanthopterygii ANCESTRAL SPECIES ENSGT00390000013823.a ENSGT00390000018500.b.b.b ENSGT00500000045044 ENSGT00940000159017.a.b.d ENSGT00500000044921.a ENSGT00510000047245 ENSGT00940000165758 ENSGT00940000164175.b ENSGT00940000159342.a ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00990000210357 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00950000182824.a.b.b.d ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT01000000220517 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a Northern pike MODERN SPECIES 9 ENSELUG00000003011 btd (ENSELUG00000002927) SH3BP5 (ENSELUG00000002905) mturn (ENSELUG00000002897) znrf2a (ENSELUG00000002889) ggcta (ENSELUG00000002878) snrpd1 (ENSELUG00000026849) ankib1a (ENSELUG00000000082) rtp3 (ENSELUG00000002818) fam83hb (ENSELUG00000001087) fkbp9 (ENSELUG00000002808) crtap (ENSELUG00000002788) #27 ENSELUG00000002771 #26 fbxl2 (ENSELUG00000002746) #24 clasp2 (ENSELUG00000002667) #21 ubp1 (ENSELUG00000002570) #22 pdcd6ip (ENSELUG00000002548) ENSELUG00000002532 cyhr1 (ENSELUG00000002515) ARHGAP4 (ENSELUG00000002498) ENSELUG00000002476 fabp3 (ENSELUG00000030686) zcchc17 (ENSELUG00000002450) snrnp40 (ENSELUG00000002438) nkain1 (ENSELUG00000002423) pum1 (ENSELUG00000002409) SDC3 (ENSELUG00000002387) ENSELUG00000002382 matn1 (ENSELUG00000002380) sesn2 (ENSELUG00000002374) yrk (ENSELUG00000002361) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 65 ENSGT00390000018500.b.b.b.d ENSGT00500000045044 ENSGT00940000159017.a.b.d.b ENSGT00500000044921.a ENSGT00510000047245.qb ENSGT00940000165758 ENSGT00940000164175.b.c ENSGT00940000159342.a.f ENSGT00940000157125.f ENSGT00940000153814.a.f #27 ENSGT00390000009163.j.a #26 ENSGT00990000210357 ENSGT00390000009163.j.b.a #26 ENSGT00940000153845.a.b.a #24 ENSGT00940000155574.C.m.a #21 ENSGT00940000156148.c.a #22 ENSGT00940000163083.l ENSGT00940000155609.l ENSGT00390000018258.o.a ENSGT00950000182824.a.b.b.d.f ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104.h ENSGT00510000047363 ENSGT00940000155058.s ENSGT00940000159949.b ENSGT00940000158079.c ENSGT00940000160209.d.b ENSGT00650000093445 ENSGT00940000159638.d ENSGT00940000159638.c.a Salmoninae_a ANCESTRAL SPECIES 28 ENSGT00390000018500.b.b.b.c ENSGT00500000045044.e ENSGT00940000159017.a.b.d.b ENSGT00500000044921.a ENSGT00510000047245.qb ENSGT00940000165758 ENSGT00940000164175.b.c ENSGT00940000159342.a.f ENSGT00940000157125.f ENSGT00940000153814.a.f #27 ENSGT00390000009163.i.a #26 ENSGT00990000210357 ENSGT00390000009163.j.b.a #26 ENSGT00940000153845.a.b.a #24 ENSGT00940000155574.C.m.a #21 ENSGT00940000156148.c.a #22 ENSGT00940000163083.l ENSGT00940000155609.l ENSGT00390000018258.o.a ENSGT00950000182824.a.b.b.d.f ENSGT00940000159476 ENSGT00940000155104.h ENSGT00510000047363 ENSGT00940000155058.s ENSGT00940000159949.b ENSGT00940000158079.c ENSGT00940000160209.d.b ENSGT00650000093445 ENSGT00940000159638.d ENSGT00940000159638.c.a ENSGT00950000183168.B.a Salmo ANCESTRAL SPECIES 2 ENSGT00500000044921.a ENSGT00510000047245.pb.a.a ENSGT01090000260586.b ENSGT00510000047245.qb ENSGT00940000165758 ENSGT00940000164175.b.c ENSGT00940000159342.a.f ENSGT01100000265001.a ENSGT00940000157125.f ENSGT00940000153814.a.f #27 ENSGT00390000009163.i.a #26 ENSGT00990000210357 ENSGT00390000009163.j.b.a #26 ENSGT00940000153845.a.b.a #24 ENSGT00940000155574.C.m.a #21 ENSGT00940000156148.c.a #22 ENSGT00940000163083.l ENSGT00940000155609.l ENSGT00390000018258.o.a ENSGT00950000182824.a.b.b.d.f ENSGT00940000159476 ENSGT00940000155104.h ENSGT00510000047363 ENSGT00940000155058.s ENSGT00940000159949.b ENSGT00940000158079.c ENSGT00940000160209.d.b ENSGT00650000093445 ENSGT00940000159638.d ENSGT00950000183168.B.a ENSGT00940000157554.cb.b Atlantic salmon MODERN SPECIES 19 mturn (ENSSSAG00000086197) znrf2a (ENSSSAG00000109583) ggcta (ENSSSAG00000111773) snrpd1 (ENSSSAG00000054572) ENSSSAG00000009861 ENSSSAG00000009797 ENSSSAG00000094794 ENSSSAG00000102829 ENSSSAG00000009768 fkbp9 (ENSSSAG00000108237) crtap (ENSSSAG00000114864) #27 ENSSSAG00000081030 ENSSSAG00000115946 #26 fbxl2 (ENSSSAG00000114854) #24 clasp2 (ENSSSAG00000100250) #21 ubp1 (ENSSSAG00000110783) #22 pdcd6ip (ENSSSAG00000080409) ENSSSAG00000115533 ENSSSAG00000099600 cyhr1 (ENSSSAG00000101754) ENSSSAG00000080374 ENSSSAG00000080368 ENSSSAG00000094940 zcchc17 (ENSSSAG00000080364) snrnp40 (ENSSSAG00000087226) nkain1 (ENSSSAG00000106218) pum1 (ENSSSAG00000079838) SDC3 (ENSSSAG00000079797) ENSSSAG00000079793 matn1 (ENSSSAG00000079789) sesn2 (ENSSSAG00000079785) River trout MODERN SPECIES 27 mturn (ENSSTUG00000036409) znrf2a (ENSSTUG00000036390) ggcta (ENSSTUG00000036371) ENSSTUG00000036362 snrpd1 (ENSSTUG00000036351) ankib1a (ENSSTUG00000036280) ENSSTUG00000036260 fam83hb (ENSSTUG00000036246) ENSSTUG00000036210 fkbp9 (ENSSTUG00000035685) crtap (ENSSTUG00000035653) #27 ENSSTUG00000035646 #26 fbxl2 (ENSSTUG00000035110) #24 ENSSTUG00000035085 clasp2 (ENSSTUG00000032034) #21 ubp1 (ENSSTUG00000031888) #22 pdcd6ip (ENSSTUG00000031012) ENSSTUG00000030987 ENSSTUG00000030974 cyhr1 (ENSSTUG00000030964) ARHGAP4 (ENSSTUG00000030329) ENSSTUG00000030262 fabp3 (ENSSTUG00000030245) zcchc17 (ENSSTUG00000030228) snrnp40 (ENSSTUG00000030117) nkain1 (ENSSTUG00000030080) pum1 (ENSSTUG00000021985) yrk (ENSSTUG00000020545) AHDC1 (ENSSTUG00000020414) wasf2 (ENSSTUG00000020373) gpr3 (ENSSTUG00000020370) Oncorhynchus ANCESTRAL SPECIES 29 ENSGT00950000182908.C.a ENSGT00390000013823.a.n.a ENSGT00390000018500.b.b.b.c ENSGT00500000045044.e ENSGT00940000159017.a.b.d.b ENSGT00500000044921.a ENSGT00510000047245.qb ENSGT00940000165758 ENSGT00940000164175.b.c ENSGT00940000159342.a.f ENSGT00940000157125.f ENSGT00940000153814.a.f #27 ENSGT00390000009163.i.a #26 ENSGT00940000153845.a.b.a #24 ENSGT00940000155574.C.m.a #21 ENSGT00940000156148.c.a #22 ENSGT00940000163083.l ENSGT00940000155609.l ENSGT00390000018258.o.a ENSGT00950000182824.a.b.b.d.f ENSGT00940000159476.l ENSGT00940000155104.h ENSGT00510000047363 ENSGT00940000155058.s ENSGT00940000159949.b ENSGT00940000158079.c ENSGT00940000160209.d.b ENSGT00650000093445 ENSGT00940000159638.c.a ENSGT00950000183168.B.a ENSGT00940000157554.cb.b Oncorhynchus_a ANCESTRAL SPECIES 29 ENSGT00390000013823.a.n.a.b ENSGT00390000013823.a.n.a.a ENSGT00390000018500.b.b.b.c ENSGT00500000045044.e ENSGT00940000159017.a.b.d.b ENSGT00500000044921.a ENSGT00510000047245.qb ENSGT00940000165758 ENSGT00940000164175.b.c ENSGT00940000159342.a.f ENSGT00940000157125.f ENSGT00940000153814.a.f #27 ENSGT00390000009163.i.a #26 ENSGT00940000153845.a.b.a #24 ENSGT00940000155574.C.m.a #21 ENSGT00940000156148.c.a #22 ENSGT00940000163083.l ENSGT00940000155609.l ENSGT00390000018258.o.a ENSGT00950000182824.a.b.b.d.f ENSGT00940000159476.l ENSGT00940000155104.h ENSGT00510000047363 ENSGT00940000155058.s ENSGT00940000159949.b ENSGT00940000158079.c ENSGT00940000160209.d.b ENSGT00650000093445 ENSGT00940000159638.c.a ENSGT00950000183168.B.a ENSGT00940000157554.cb.b Coho salmon MODERN SPECIES 8 btd (ENSOKIG00005010045) SH3BP5 (ENSOKIG00005010101) mturn (ENSOKIG00005010124) znrf2a (ENSOKIG00005010137) ggcta (ENSOKIG00005010165) snrpd1 (ENSOKIG00005010171) ENSOKIG00005010191 ENSOKIG00005010245 ENSOKIG00005010260 ENSOKIG00005010292 fkbp9 (ENSOKIG00005010298) crtap (ENSOKIG00005010314) #27 ENSOKIG00005010340 #26 fbxl2 (ENSOKIG00005010388) #24 clasp2 (ENSOKIG00005011098) #21 ubp1 (ENSOKIG00005014375) #22 pdcd6ip (ENSOKIG00005014448) ENSOKIG00005015282 cyhr1 (ENSOKIG00005015312) ENSOKIG00005015364 ENSOKIG00005015540 fabp3 (ENSOKIG00005015577) zcchc17 (ENSOKIG00005015597) snrnp40 (ENSOKIG00005015620) nkain1 (ENSOKIG00005015660) pum1 (ENSOKIG00005015820) SDC3 (ENSOKIG00005018172) ENSOKIG00005018175 matn1 (ENSOKIG00005018190) sesn2 (ENSOKIG00005018257) yrk (ENSOKIG00005018339) Chinook salmon MODERN SPECIES 4 SNX13 (ENSOTSG00005004119) ENSOTSG00005004746 ENSOTSG00005004748 mturn (ENSOTSG00005004749) znrf2a (ENSOTSG00005004750) ggcta (ENSOTSG00005004756) snrpd1 (ENSOTSG00005004771) ankib1a (ENSOTSG00005004776) ENSOTSG00005004779 fam83hb (ENSOTSG00005004781) fkbp9 (ENSOTSG00005004794) crtap (ENSOTSG00005004867) #27 ENSOTSG00005004871 #26 fbxl2 (ENSOTSG00005004878) #24 clasp2 (ENSOTSG00005004981) #21 ubp1 (ENSOTSG00005006036) #22 pdcd6ip (ENSOTSG00005006063) ENSOTSG00005009164 cyhr1 (ENSOTSG00005009166) ENSOTSG00005009167 ENSOTSG00005009168 ENSOTSG00005009169 zcchc17 (ENSOTSG00005009170) snrnp40 (ENSOTSG00005019033) nkain1 (ENSOTSG00005019048) pum1 (ENSOTSG00005019083) ENSOTSG00005027004 ENSOTSG00005027008 matn1 (ENSOTSG00005027010) sesn2 (ENSOTSG00005027011) ENSOTSG00005027013 Rainbow trout MODERN SPECIES 9 ENSOMYG00000051760 mturn (ENSOMYG00000043164) znrf2a (ENSOMYG00000043160) ggcta (ENSOMYG00000043155) snrpd1 (ENSOMYG00000043154) ENSOMYG00000051541 ENSOMYG00000043146 ENSOMYG00000043140 ENSOMYG00000043136 ENSOMYG00000052526 fkbp9 (ENSOMYG00000043116) crtap (ENSOMYG00000043111) #27 ENSOMYG00000043100 #26 fbxl2 (ENSOMYG00000043022) #24 clasp2 (ENSOMYG00000041281) #21 ubp1 (ENSOMYG00000042996) #22 pdcd6ip (ENSOMYG00000042822) ENSOMYG00000041136 ENSOMYG00000070500 #18 cyhr1 (ENSOMYG00000041131) ENSOMYG00000041121 ENSOMYG00000041107 fabp3 (ENSOMYG00000041099) zcchc17 (ENSOMYG00000041090) snrnp40 (ENSOMYG00000041070) nkain1 (ENSOMYG00000041062) pum1 (ENSOMYG00000040426) ENSOMYG00000048712 SDC3 (ENSOMYG00000062998) matn1 (ENSOMYG00000040204) sesn2 (ENSOMYG00000040195) Huchen MODERN SPECIES 956 ENSHHUG00000020478 kcnk1b (ENSHHUG00000020486) ENSHHUG00000020495 ENSHHUG00000020837 agpat4 (ENSHHUG00000020856) ENSHHUG00000020967 ENSHHUG00000021330 clasp2 (ENSHHUG00000021342) #21 ubp1 (ENSHHUG00000021738) #22 pdcd6ip (ENSHHUG00000021764) ENSHHUG00000021829 cyhr1 (ENSHHUG00000021840) ARHGAP4 (ENSHHUG00000021855) Salmoninae ANCESTRAL SPECIES 882 ENSGT00940000172951 ENSGT00940000157125.e ENSGT00940000153814.a.e #27 ENSGT00390000009163.i #26 ENSGT00940000153845.a.b.b #24 ENSGT00940000155574.C.m.b #21 ENSGT00940000156148.c.b #22 ENSGT00940000163083.k.a.a Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00390000013823.a.m.a.a ENSGT00390000013823.a.m.b ENSGT00390000018500.b.b.b.d ENSGT00500000045044.f ENSGT00940000159017.a.b.d.a ENSGT00510000047245.pb.a.a ENSGT00940000164175.b.d ENSGT00940000159342.a.e ENSGT00390000017352 ENSGT00940000172951 ENSGT00940000157125.e ENSGT00940000153814.a.e #27 ENSGT00390000009163.i.b #26 ENSGT00940000153845.a.b.b #24 ENSGT00940000155574.C.m.b #21 ENSGT00940000156148.c.b #22 ENSGT00940000163083.k.a.a ENSGT00940000163083.k.b ENSGT00390000018258.o.b ENSGT00940000155104.g ENSGT00940000155058.t ENSGT00940000159949.a ENSGT00940000158079.d ENSGT00940000160209.d.a ENSGT00940000157554.cb.a ENSGT00390000018883.e ENSGT00950000182962.b.a.d ENSGT01060000248564.b.a.a.a.c ENSGT00940000160932.c.b ENSGT00390000003571.g.f ENSGT00940000159099.l.b #30 Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00950000182856.a.a.a.n ENSGT00390000013823.a.m.b ENSGT00390000018500.b.b.b.d ENSGT00500000045044.f ENSGT00940000159017.a.b.d.a ENSGT00510000047245.pb.a.a ENSGT00940000164175.b.d ENSGT00940000159342.a.e ENSGT00390000017352 ENSGT00940000172951 ENSGT00940000157125.e ENSGT00940000153814.a.e #27 ENSGT00390000009163.i.b #26 ENSGT00940000153845.a.b.b #24 ENSGT00940000155574.C.m.b #21 ENSGT00940000156148.c.b #22 ENSGT00940000163083.k.a.a ENSGT00390000018258.o.b ENSGT00940000159476.k ENSGT00940000155104.g ENSGT00940000155058.t ENSGT00940000159949.a ENSGT00940000158079.d ENSGT00940000160209.d.a ENSGT00940000157554.cb.a ENSGT00390000018883.e ENSGT00950000182962.b.a.d ENSGT00940000160932.c.b ENSGT00390000003571.g.f ENSGT00940000159099.l.b #30 ENSGT00390000016277.a.l.b Rainbow trout MODERN SPECIES 24 ENSOMYG00000059568 btd (ENSOMYG00000051451) ENSOMYG00000063936 mturn (ENSOMYG00000061799) znrf2a (ENSOMYG00000049311) snrpd1 (ENSOMYG00000075625) ENSOMYG00000059745 ENSOMYG00000053846 ENSOMYG00000006186 ENSOMYG00000006150 fkbp9 (ENSOMYG00000072994) ENSOMYG00000071938 #26 fbxl2 (ENSOMYG00000052860) #24 ENSOMYG00000048555 clasp2 (ENSOMYG00000074294) #21 ubp1 (ENSOMYG00000077660) #22 pdcd6ip (ENSOMYG00000006025) cyhr1 (ENSOMYG00000005872) fabp3 (ENSOMYG00000005893) snrnp40 (ENSOMYG00000005806) nkain1 (ENSOMYG00000005739) ENSOMYG00000074165 ENSOMYG00000069130 pum1 (ENSOMYG00000074731) SDC3 (ENSOMYG00000061113) ENSOMYG00000064715 yrk (ENSOMYG00000064825) ENSOMYG00000005608 wasf2 (ENSOMYG00000074056) ENSOMYG00000072438 ENSOMYG00000059604 Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00950000182856.a.a.a.n ENSGT00390000013823.a.m.b ENSGT00390000018500.b.b.b.d ENSGT00500000045044.f ENSGT00940000159017.a.b.d.a ENSGT00510000047245.pb.a.a ENSGT00940000164175.b.d ENSGT00940000159342.a.e ENSGT00390000017352 ENSGT00940000172951 ENSGT00940000157125.e ENSGT00940000153814.a.e #27 ENSGT00390000009163.i.b #26 ENSGT00940000153845.a.b.b #24 ENSGT00940000155574.C.m.b #21 ENSGT00940000156148.c.b #22 ENSGT00940000163083.k.a.a ENSGT00390000018258.o.b ENSGT00940000159476.k ENSGT00940000155104.g ENSGT00940000155058.t ENSGT00940000159949.a ENSGT00940000158079.d ENSGT00940000160209.d.a ENSGT00940000157554.cb.a ENSGT00390000018883.e ENSGT00950000182962.b.a.d ENSGT00940000160932.c.b ENSGT00940000159099.l.b #30 ENSGT00390000016277.a.l.b ENSGT00390000007888.h Coho salmon MODERN SPECIES 5 SNX13 (ENSOKIG00005021856) btd (ENSOKIG00005023689) SH3BP5 (ENSOKIG00005023702) mturn (ENSOKIG00005023776) znrf2a (ENSOKIG00005023794) snrpd1 (ENSOKIG00005023834) ENSOKIG00005023863 fam83hb (ENSOKIG00005023877) ENSOKIG00005023928 fkbp9 (ENSOKIG00005023972) crtap (ENSOKIG00005024000) #27 ENSOKIG00005024060 ENSOKIG00005024079 #26 fbxl2 (ENSOKIG00005024103) #24 clasp2 (ENSOKIG00005024353) #21 ubp1 (ENSOKIG00005027216) #22 pdcd6ip (ENSOKIG00005027371) cyhr1 (ENSOKIG00005027586) ENSOKIG00005027609 ENSOKIG00005027634 fabp3 (ENSOKIG00005027664) snrnp40 (ENSOKIG00005027686) nkain1 (ENSOKIG00005027849) pum1 (ENSOKIG00005027892) SDC3 (ENSOKIG00005028114) yrk (ENSOKIG00005028174) ENSOKIG00005029681 wasf2 (ENSOKIG00005029684) ENSOKIG00005029691 ENSOKIG00005029733 ENSOKIG00005029738 Salmo ANCESTRAL SPECIES 2 ENSGT01090000259987.b.a.f ENSGT00390000005553 ENSGT00940000163428.b.b.a ENSGT00950000182856.a.a.a.n ENSGT00390000013823.a.m.a.a ENSGT00390000018500.b.b.b.d ENSGT00500000045044.f ENSGT00940000159017.a.b.d.a ENSGT00510000047245.pb.a.b ENSGT00940000164175.b.d ENSGT00940000159342.a.e ENSGT00940000157125.e ENSGT00940000153814.a.e #27 ENSGT00940000153845.a.b.b #24 ENSGT00940000155574.C.m.b #21 ENSGT00940000156148.c.b #22 ENSGT00940000163083.k.b ENSGT00390000018258.o.b ENSGT00950000182824.a.b.b.d.e ENSGT00940000155104.g ENSGT00940000155058.t ENSGT00940000159949.a ENSGT00940000158079.d ENSGT00940000160209.d.a ENSGT00940000157554.cb.a ENSGT00950000182962.b.a.d ENSGT01060000248564.b.a.a.a.c ENSGT00940000160932.c.b ENSGT00390000003571.g.f ENSGT00940000159099.l.b #30 ENSGT00390000016277.a.l.b Atlantic salmon MODERN SPECIES 5 ENSSSAG00000054183 btd (ENSSSAG00000054529) ENSSSAG00000054536 mturn (ENSSSAG00000054566) ENSSSAG00000114663 znrf2a (ENSSSAG00000083850) snrpd1 (ENSSSAG00000082275) ENSSSAG00000116002 ENSSSAG00000054585 fkbp9 (ENSSSAG00000115283) ENSSSAG00000121713 #26 fbxl2 (ENSSSAG00000081026) #24 ENSSSAG00000094283 clasp2 (ENSSSAG00000080762) #21 ENSSSAG00000086880 ubp1 (ENSSSAG00000080525) #22 pdcd6ip (ENSSSAG00000054882) cyhr1 (ENSSSAG00000054923) ENSSSAG00000053914 FABPH (ENSSSAG00000054088) snrnp40 (ENSSSAG00000080354) nkain1 (ENSSSAG00000054108) pum1 (ENSSSAG00000082549) SDC3 (ENSSSAG00000107734) ENSSSAG00000091499 FGR (ENSSSAG00000118016) ENSSSAG00000054933 GPR3 (ENSSSAG00000078324) ENSSSAG00000102061 ENSSSAG00000042781 ENSSSAG00000042788 #30 Salmoninae ANCESTRAL SPECIES ENSGT00940000156148.d #22 Huchen MODERN SPECIES 4658 clasp2 (ENSHHUG00000044580) #21 ENSHHUG00000044617 #22 Acanthomorphata ANCESTRAL SPECIES 55 ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00990000210357 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT01000000220517 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00950000182962.b.a Cod MODERN SPECIES 14 ENSGMOG00000022868 zgc:91944 (ENSGMOG00000004622) ENSGMOG00000034830 ENSGMOG00000031352 ENSGMOG00000017358 ENSGMOG00000000124 ENSGMOG00000000118 ENSGMOG00000027623 ENSGMOG00000000099 ENSGMOG00000027900 fkbp9 (ENSGMOG00000014984) crtap (ENSGMOG00000014964) #27 ENSGMOG00000028998 #26 fbxl2 (ENSGMOG00000010295) #24 clasp2 (ENSGMOG00000010321) #21 ubp1 (ENSGMOG00000010354) #22 pdcd6ip (ENSGMOG00000010373) cyhr1 (ENSGMOG00000010429) ENSGMOG00000010440 fabp3 (ENSGMOG00000010446) zcchc17 (ENSGMOG00000010452) snrnp40 (ENSGMOG00000010466) nkain1 (ENSGMOG00000010477) pum1 (ENSGMOG00000010491) ENSGMOG00000029918 ENSGMOG00000031112 matn1 (ENSGMOG00000028455) ENSGMOG00000015579 yrk (ENSGMOG00000036856) ENSGMOG00000006844 ENSGMOG00000006858 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00990000210357 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT01000000220517 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00950000182962.b.a Pinecone sodierfish MODERN SPECIES 2 ZNF385D (ENSMMDG00005004342) rab25a (ENSMMDG00005004352) UBQLN4 (ENSMMDG00005004392) LIM2 (ENSMMDG00005004800) TINAGL1 (ENSMMDG00005004814) cfap300 (ENSMMDG00005004822) KCNQ4 (ENSMMDG00005004827) nfyc (ENSMMDG00005004862) ENSMMDG00005005350 RPRD1A (ENSMMDG00005005356) fkbp9 (ENSMMDG00005005387) crtap (ENSMMDG00005005477) #27 ENSMMDG00005005478 #26 fbxl2 (ENSMMDG00005005496) #24 clasp2 (ENSMMDG00005006593) #21 ubp1 (ENSMMDG00005023022) #22 pdcd6ip (ENSMMDG00005023041) ENSMMDG00005023046 cyhr1 (ENSMMDG00005023048) ENSMMDG00005023051 fabp3 (ENSMMDG00005023052) zcchc17 (ENSMMDG00005023054) snrnp40 (ENSMMDG00005023056) nkain1 (ENSMMDG00005023060) pum1 (ENSMMDG00005023136) SDC3 (ENSMMDG00005024225) ENSMMDG00005024227 matn1 (ENSMMDG00005024230) sesn2 (ENSMMDG00005024231) yrk (ENSMMDG00005024234) AHDC1 (ENSMMDG00005024241) Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00990000210357 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT01000000220517 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a Tiger tail seahorse MODERN SPECIES 231 nfatc1 (ENSHCOG00000004681) atp9b (ENSHCOG00000004727) sall3b (ENSHCOG00000004745) ENSHCOG00000004754 fkbp9 (ENSHCOG00000004765) crtap (ENSHCOG00000004794) #27 ENSHCOG00000004809 #26 fbxl2 (ENSHCOG00000004849) #24 ENSHCOG00000004857 clasp2 (ENSHCOG00000004910) #21 ubp1 (ENSHCOG00000004965) #22 pdcd6ip (ENSHCOG00000004996) ENSHCOG00000005036 cyhr1 (ENSHCOG00000005045) ENSHCOG00000005054 ENSHCOG00000005061 fabp3 (ENSHCOG00000005071) zcchc17 (ENSHCOG00000005075) snrnp40 (ENSHCOG00000005094) nkain1 (ENSHCOG00000005114) ENSHCOG00000005122 pum1 (ENSHCOG00000005149) SDC3 (ENSHCOG00000005166) ENSHCOG00000005175 matn1 (ENSHCOG00000005192) ENSHCOG00000005199 Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00990000210357 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT01000000220517 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 Ovalentaria ANCESTRAL SPECIES 12 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00990000210357 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00990000210357 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Mangrove rivulus MODERN SPECIES 2 ZNF385D (ENSKMAG00000004957) rab25a (ENSKMAG00000004945) UBQLN4 (ENSKMAG00000004904) LIM2 (ENSKMAG00000004882) TINAGL1 (ENSKMAG00000004823) cfap300 (ENSKMAG00000004758) KCNQ4 (ENSKMAG00000004704) nfyc (ENSKMAG00000004636) RPRD1A (ENSKMAG00000004597) dnal1 (ENSKMAG00000004577) fkbp9 (ENSKMAG00000004544) crtap (ENSKMAG00000004531) #27 ENSKMAG00000004514 #26 fbxl2 (ENSKMAG00000004442) #24 clasp2 (ENSKMAG00000004284) #21 ubp1 (ENSKMAG00000004223) #22 pdcd6ip (ENSKMAG00000004128) ENSKMAG00000004052 cyhr1 (ENSKMAG00000004026) ENSKMAG00000003756 fabp3 (ENSKMAG00000003677) zcchc17 (ENSKMAG00000003662) snrnp40 (ENSKMAG00000003625) nkain1 (ENSKMAG00000003596) pum1 (ENSKMAG00000003481) SDC3 (ENSKMAG00000003443) ENSKMAG00000003427 matn1 (ENSKMAG00000003359) sesn2 (ENSKMAG00000003324) yrk (ENSKMAG00000003276) ENSKMAG00000003258 Turquoise killifish MODERN SPECIES 1628 TINAGL1 (ENSNFUG00015019296) ncaph (ENSNFUG00015019332) vamp8 (ENSNFUG00015019343) cfap300 (ENSNFUG00015019344) KCNQ4 (ENSNFUG00015019359) NFYC (ENSNFUG00015020051) ENSNFUG00015020066 RPRD1A (ENSNFUG00015020073) ENSNFUG00015020094 DNAL1 (ENSNFUG00015020100) fkbp9 (ENSNFUG00015020111) crtap (ENSNFUG00015020158) #27 ENSNFUG00015020165 #26 fbxl2 (ENSNFUG00015020172) #24 clasp2 (ENSNFUG00015020334) #21 ubp1 (ENSNFUG00015021591) #22 PDCD6IP (ENSNFUG00015021638) ARPP21 (ENSNFUG00015021713) CYHR1 (ENSNFUG00015021722) ENSNFUG00015021728 FABP3 (ENSNFUG00015021917) zcchc17 (ENSNFUG00015021919) SNRNP40 (ENSNFUG00015021920) NKAIN1 (ENSNFUG00015021931) pum1 (ENSNFUG00015021955) SDC3 (ENSNFUG00015022277) matn1 (ENSNFUG00015022282) MATN1 (ENSNFUG00015022287) yrk (ENSNFUG00015022291) AHDC1 (ENSNFUG00015022322) WASF2 (ENSNFUG00015022325) Cyprinodontoidei ANCESTRAL SPECIES 11 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 NAME_4 ANCESTRAL SPECIES 10 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b.f ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Sheepshead minnow MODERN SPECIES 183 rab25a (ENSCVAG00000008126) UBQLN4 (ENSCVAG00000008099) lim2.4 (ENSCVAG00000000221) TINAGL1 (ENSCVAG00000008044) cfap300 (ENSCVAG00000008000) KCNQ4 (ENSCVAG00000007920) nfyc (ENSCVAG00000007788) ENSCVAG00000007740 RPRD1A (ENSCVAG00000007732) dnal1 (ENSCVAG00000007704) fkbp9 (ENSCVAG00000007686) crtap (ENSCVAG00000007675) #27 ENSCVAG00000007654 #26 fbxl2 (ENSCVAG00000007633) #24 clasp2 (ENSCVAG00000007610) #21 ubp1 (ENSCVAG00000000202) #22 pdcd6ip (ENSCVAG00000007264) ENSCVAG00000007202 cyhr1 (ENSCVAG00000007158) ENSCVAG00000007135 fabp3 (ENSCVAG00000007119) zcchc17 (ENSCVAG00000007112) snrnp40 (ENSCVAG00000007097) nkain1 (ENSCVAG00000007059) pum1 (ENSCVAG00000007043) SDC3 (ENSCVAG00000006999) matn1 (ENSCVAG00000006992) sesn2 (ENSCVAG00000006945) yrk (ENSCVAG00000006923) AHDC1 (ENSCVAG00000006908) ENSCVAG00000006898 Mummichog MODERN SPECIES 270 ENSFHEG00000009208 ##24 clasp2 (ENSFHEG00000009148) #21 ubp1 (ENSFHEG00000008116) #22 pdcd6ip (ENSFHEG00000007980) ENSFHEG00000007936 cyhr1 (ENSFHEG00000007922) ENSFHEG00000007886 fabp3 (ENSFHEG00000007868) ENSFHEG00000007859 zcchc17 (ENSFHEG00000007848) snrnp40 (ENSFHEG00000007838) nkain1 (ENSFHEG00000007803) pum1 (ENSFHEG00000007765) SDC3 (ENSFHEG00000007728) ENSFHEG00000007720 matn1 (ENSFHEG00000007713) sesn2 (ENSFHEG00000007656) yrk (ENSFHEG00000000198) Poeciliinae ANCESTRAL SPECIES 18 ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Poecilia ANCESTRAL SPECIES 24 ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 NAME_6 ANCESTRAL SPECIES 21 ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Sailfin molly MODERN SPECIES 1267 dnal1 (ENSPLAG00000001266) fkbp9 (ENSPLAG00000001270) crtap (ENSPLAG00000001275) #27 ENSPLAG00000001280 #26 fbxl2 (ENSPLAG00000001286) #24 clasp2 (ENSPLAG00000001320) #21 ubp1 (ENSPLAG00000001340) #22 Amazon molly MODERN SPECIES 273 UBQLN4 (ENSPFOG00000010520) LIM2 (ENSPFOG00000010498) TINAGL1 (ENSPFOG00000024014) cfap300 (ENSPFOG00000010433) KCNQ4 (ENSPFOG00000009977) nfyc (ENSPFOG00000009785) ENSPFOG00000009758 RPRD1A (ENSPFOG00000009698) ENSPFOG00000022972 dnal1 (ENSPFOG00000009636) fkbp9 (ENSPFOG00000009499) crtap (ENSPFOG00000009354) #27 ENSPFOG00000009319 #26 fbxl2 (ENSPFOG00000009205) #24 clasp2 (ENSPFOG00000008615) #21 ubp1 (ENSPFOG00000008378) #22 pdcd6ip (ENSPFOG00000008147) ENSPFOG00000008096 cyhr1 (ENSPFOG00000008037) ENSPFOG00000008018 fabp3 (ENSPFOG00000007975) zcchc17 (ENSPFOG00000007896) snrnp40 (ENSPFOG00000007663) nkain1 (ENSPFOG00000024013) pum1 (ENSPFOG00000007289) SDC3 (ENSPFOG00000007251) ENSPFOG00000022548 ENSPFOG00000021771 matn1 (ENSPFOG00000007107) sesn2 (ENSPFOG00000007014) yrk (ENSPFOG00000006894) Guppy MODERN SPECIES 441 rab25a (ENSPREG00000006119) UBQLN4 (ENSPREG00000006021) LIM2 (ENSPREG00000006002) TINAGL1 (ENSPREG00000005972) cfap300 (ENSPREG00000005910) KCNQ4 (ENSPREG00000005859) nfyc (ENSPREG00000005805) ENSPREG00000005783 RPRD1A (ENSPREG00000005762) dnal1 (ENSPREG00000005740) fkbp9 (ENSPREG00000005728) crtap (ENSPREG00000005707) #27 ENSPREG00000005667 #26 fbxl2 (ENSPREG00000005611) #24 clasp2 (ENSPREG00000005520) #21 ubp1 (ENSPREG00000005474) #22 pdcd6ip (ENSPREG00000005420) cyhr1 (ENSPREG00000005377) ENSPREG00000005350 fabp3 (ENSPREG00000005333) zcchc17 (ENSPREG00000005325) snrnp40 (ENSPREG00000005289) nkain1 (ENSPREG00000005269) pum1 (ENSPREG00000005195) SDC3 (ENSPREG00000005172) ENSPREG00000005136 matn1 (ENSPREG00000005069) sesn2 (ENSPREG00000005042) yrk (ENSPREG00000005009) AHDC1 (ENSPREG00000004999) wasf2 (ENSPREG00000004977) Platyfish MODERN SPECIES 4 LIM2 (ENSXMAG00000003204) TINAGL1 (ENSXMAG00000003194) cfap300 (ENSXMAG00000007924) KCNQ4 (ENSXMAG00000003184) nfyc (ENSXMAG00000003179) ENSXMAG00000003178 RPRD1A (ENSXMAG00000003172) dnal1 (ENSXMAG00000028736) fkbp9 (ENSXMAG00000003160) crtap (ENSXMAG00000003153) #27 ENSXMAG00000029488 #26 ENSXMAG00000026756 fbxl2 (ENSXMAG00000003112) #24 ENSXMAG00000022442 clasp2 (ENSXMAG00000003043) #21 ubp1 (ENSXMAG00000003023) #22 pdcd6ip (ENSXMAG00000003000) ENSXMAG00000002994 cyhr1 (ENSXMAG00000002990) ENSXMAG00000002989 fabp3 (ENSXMAG00000002986) zcchc17 (ENSXMAG00000002980) snrnp40 (ENSXMAG00000002970) nkain1 (ENSXMAG00000002965) pum1 (ENSXMAG00000002945) SDC3 (ENSXMAG00000026274) ENSXMAG00000027994 matn1 (ENSXMAG00000002933) sesn2 (ENSXMAG00000002916) yrk (ENSXMAG00000002890) AHDC1 (ENSXMAG00000029670) Oryzias ANCESTRAL SPECIES 22 ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00990000210357 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079.h ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 Oryzias_b ANCESTRAL SPECIES 22 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079.h ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00950000182962.b.a Javanese ricefish MODERN SPECIES 2 rab25a (ENSOJAG00000012701) UBQLN4 (ENSOJAG00000012728) LIM2 (ENSOJAG00000012774) TINAGL1 (ENSOJAG00000012826) cfap300 (ENSOJAG00000012913) KCNQ4 (ENSOJAG00000012989) nfyc (ENSOJAG00000013876) ENSOJAG00000014033 RPRD1A (ENSOJAG00000014045) dnal1 (ENSOJAG00000014068) fkbp9 (ENSOJAG00000014101) crtap (ENSOJAG00000014314) #27 ENSOJAG00000014328 #26 fbxl2 (ENSOJAG00000014384) #24 clasp2 (ENSOJAG00000014769) #21 ubp1 (ENSOJAG00000016569) #22 pdcd6ip (ENSOJAG00000016848) ENSOJAG00000016911 cyhr1 (ENSOJAG00000016981) ENSOJAG00000017012 fabp3 (ENSOJAG00000017031) zcchc17 (ENSOJAG00000001627) snrnp40 (ENSOJAG00000001749) nkain1 (ENSOJAG00000001884) pum1 (ENSOJAG00000002521) ENSOJAG00000005385 matn1 (ENSOJAG00000005406) sesn2 (ENSOJAG00000005447) yrk (ENSOJAG00000005571) ENSOJAG00000005716 wasf2 (ENSOJAG00000005733) Indian medaka MODERN SPECIES 3 rab25a (ENSOMEG00000010510) UBQLN4 (ENSOMEG00000010492) lim2.4 (ENSOMEG00000010467) TINAGL1 (ENSOMEG00000010435) cfap300 (ENSOMEG00000010381) KCNQ4 (ENSOMEG00000010348) nfyc (ENSOMEG00000010270) ENSOMEG00000010192 RPRD1A (ENSOMEG00000010157) ENSOMEG00000010121 fkbp9 (ENSOMEG00000010099) crtap (ENSOMEG00000010081) #27 ENSOMEG00000010051 #26 fbxl2 (ENSOMEG00000000241) #24 clasp2 (ENSOMEG00000009947) #21 ubp1 (ENSOMEG00000009863) #22 pdcd6ip (ENSOMEG00000009710) ENSOMEG00000009631 cyhr1 (ENSOMEG00000009594) ENSOMEG00000009551 fabp3 (ENSOMEG00000009508) zcchc17 (ENSOMEG00000009464) snrnp40 (ENSOMEG00000009419) nkain1 (ENSOMEG00000009358) ENSOMEG00000009335 pum1 (ENSOMEG00000009312) SDC3 (ENSOMEG00000009263) ENSOMEG00000009228 matn1 (ENSOMEG00000009191) sesn2 (ENSOMEG00000009161) yrk (ENSOMEG00000009132) Oryzias_a ANCESTRAL SPECIES 18 ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00390000016904 ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00990000210357 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079.h ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Chinese medaka MODERN SPECIES 13 LIM2 (ENSOSIG00000006016) TINAGL1 (ENSOSIG00000006018) cfap300 (ENSOSIG00000006056) KCNQ4 (ENSOSIG00000006071) nfyc (ENSOSIG00000006441) ENSOSIG00000006483 RPRD1A (ENSOSIG00000006488) dnal1 (ENSOSIG00000006492) fkbp9 (ENSOSIG00000006497) crtap (ENSOSIG00000006684) #27 ENSOSIG00000006685 ENSOSIG00000006686 #26 fbxl2 (ENSOSIG00000006691) #24 clasp2 (ENSOSIG00000006729) #21 zcchc17 (ENSOSIG00000008189) ubp1 (ENSOSIG00000008221) #22 pdcd6ip (ENSOSIG00000011247) ENSOSIG00000011259 cyhr1 (ENSOSIG00000011264) ENSOSIG00000011279 fabp3 (ENSOSIG00000012052) snrnp40 (ENSOSIG00000012057) nkain1 (ENSOSIG00000012738) pum1 (ENSOSIG00000012797) SDC3 (ENSOSIG00000015985) ENSOSIG00000015986 matn1 (ENSOSIG00000015987) sesn2 (ENSOSIG00000015988) yrk (ENSOSIG00000016005) AHDC1 (ENSOSIG00000017214) ENSOSIG00000017215 Japanese Medaka HdrR MODERN SPECIES 2 rab25a (ENSORLG00000012158) UBQLN4 (ENSORLG00000022806) ENSORLG00000012119 TINAGL1 (ENSORLG00000012101) cfap300 (ENSORLG00000012056) KCNQ4 (ENSORLG00000012041) nfyc (ENSORLG00000012000) ENSORLG00000011943 RPRD1A (ENSORLG00000011917) dnal1 (ENSORLG00000011890) fkbp9 (ENSORLG00000011880) crtap (ENSORLG00000011852) #27 ENSORLG00000027239 #26 fbxl2 (ENSORLG00000011797) #24 clasp2 (ENSORLG00000011760) #21 ubp1 (ENSORLG00000011706) #22 pdcd6ip (ENSORLG00000011651) ENSORLG00000011606 cyhr1 (ENSORLG00000011594) ENSORLG00000011581 fabp3 (ENSORLG00000011573) zcchc17 (ENSORLG00000011563) snrnp40 (ENSORLG00000011539) nkain1 (ENSORLG00000022267) pum1 (ENSORLG00000011482) SDC3 (ENSORLG00000026192) ENSORLG00000028896 matn1 (ENSORLG00000011158) sesn2 (ENSORLG00000011116) yrk (ENSORLG00000011084) AHDC1 (ENSORLG00000026505) Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 Pomacentridae ANCESTRAL SPECIES 7 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a Amphiprion ANCESTRAL SPECIES 16 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00950000182962.b.a Clown anemonefish MODERN SPECIES 1714 rab25a (ENSAOCG00000003528) UBQLN4 (ENSAOCG00000000096) LIM2 (ENSAOCG00000003553) TINAGL1 (ENSAOCG00000003561) cfap300 (ENSAOCG00000003573) KCNQ4 (ENSAOCG00000003594) nfyc (ENSAOCG00000003630) ENSAOCG00000003645 RPRD1A (ENSAOCG00000003657) fkbp9 (ENSAOCG00000003677) crtap (ENSAOCG00000003683) #27 ENSAOCG00000003703 #26 fbxl2 (ENSAOCG00000003718) #24 ENSAOCG00000002694 clasp2 (ENSAOCG00000003757) #21 ubp1 (ENSAOCG00000003792) #22 pdcd6ip (ENSAOCG00000003825) ENSAOCG00000003840 cyhr1 (ENSAOCG00000003852) ENSAOCG00000003865 fabp3 (ENSAOCG00000003875) zcchc17 (ENSAOCG00000003880) snrnp40 (ENSAOCG00000003898) nkain1 (ENSAOCG00000003914) pum1 (ENSAOCG00000003944) Orange clownfish MODERN SPECIES 8 rab25a (ENSAPEG00000013500) UBQLN4 (ENSAPEG00000013530) LIM2 (ENSAPEG00000013579) TINAGL1 (ENSAPEG00000013606) cfap300 (ENSAPEG00000013640) KCNQ4 (ENSAPEG00000013703) nfyc (ENSAPEG00000013755) ENSAPEG00000013806 RPRD1A (ENSAPEG00000013832) fkbp9 (ENSAPEG00000013853) crtap (ENSAPEG00000013897) #27 ENSAPEG00000013933 #26 fbxl2 (ENSAPEG00000013957) #24 ENSAPEG00000013984 clasp2 (ENSAPEG00000014025) #21 ubp1 (ENSAPEG00000014146) #22 pdcd6ip (ENSAPEG00000014219) ENSAPEG00000014325 cyhr1 (ENSAPEG00000014374) ENSAPEG00000014406 fabp3 (ENSAPEG00000014441) zcchc17 (ENSAPEG00000014460) snrnp40 (ENSAPEG00000014482) nkain1 (ENSAPEG00000014505) pum1 (ENSAPEG00000014550) SDC3 (ENSAPEG00000014671) matn1 (ENSAPEG00000014686) sesn2 (ENSAPEG00000014729) yrk (ENSAPEG00000014809) ENSAPEG00000014881 ENSAPEG00000014957 Spiny chromis MODERN SPECIES 336 fbxl2 (ENSAPOG00000022354) #24 clasp2 (ENSAPOG00000022260) #21 ubp1 (ENSAPOG00000021986) #22 pdcd6ip (ENSAPOG00000021926) ENSAPOG00000021873 cyhr1 (ENSAPOG00000021811) ENSAPOG00000021766 fabp3 (ENSAPOG00000021755) zcchc17 (ENSAPOG00000021724) snrnp40 (ENSAPOG00000021710) nkain1 (ENSAPOG00000000615) pum1 (ENSAPOG00000021632) SDC3 (ENSAPOG00000021526) matn1 (ENSAPOG00000021505) sesn2 (ENSAPOG00000021467) yrk (ENSAPOG00000021415) AHDC1 (ENSAPOG00000021368) ENSAPOG00000021354 Bicolor damselfish MODERN SPECIES 926 KCNQ4 (ENSSPAG00000000822) nfyc (ENSSPAG00000000753) ENSSPAG00000000742 RPRD1A (ENSSPAG00000000713) fkbp9 (ENSSPAG00000000707) crtap (ENSSPAG00000000674) #27 ENSSPAG00000000664 #26 fbxl2 (ENSSPAG00000000600) #24 clasp2 (ENSSPAG00000000266) #21 ubp1 (ENSSPAG00000000178) #22 pdcd6ip (ENSSPAG00000000104) Cichlidae ANCESTRAL SPECIES 7 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 Midas cichlid MODERN SPECIES 1257 ZNF385D (ENSACIG00000019786) rab25a (ENSACIG00000019803) UBQLN4 (ENSACIG00000019826) LIM2 (ENSACIG00000019855) TINAGL1 (ENSACIG00000019865) cfap300 (ENSACIG00000019886) KCNQ4 (ENSACIG00000019926) nfyc (ENSACIG00000019950) RPRD1A (ENSACIG00000019980) fkbp9 (ENSACIG00000019991) crtap (ENSACIG00000020022) #27 ENSACIG00000020151 #26 fbxl2 (ENSACIG00000020167) #24 ENSACIG00000020193 clasp2 (ENSACIG00000020207) #21 ubp1 (ENSACIG00000020276) #22 pdcd6ip (ENSACIG00000020302) cyhr1 (ENSACIG00000020337) ENSACIG00000020355 fabp3 (ENSACIG00000020437) zcchc17 (ENSACIG00000020915) snrnp40 (ENSACIG00000020980) nkain1 (ENSACIG00000020994) pum1 (ENSACIG00000021013) SDC3 (ENSACIG00000021045) matn1 (ENSACIG00000021057) sesn2 (ENSACIG00000021080) yrk (ENSACIG00000021107) AHDC1 (ENSACIG00000021132) wasf2 (ENSACIG00000021139) gpr3 (ENSACIG00000021155) Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445.e ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445.e ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 Haplochromini ANCESTRAL SPECIES 5 ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445.e ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 Burton s mouthbrooder MODERN SPECIES 420 fkbp9 (ENSHBUG00000018193) crtap (ENSHBUG00000018229) #27 ENSHBUG00000018267 #26 fbxl2 (ENSHBUG00000018295) #24 ENSHBUG00000018307 #21 clasp2 (ENSHBUG00000018396) #21 ubp1 (ENSHBUG00000018427) #22 pdcd6ip (ENSHBUG00000018493) ENSHBUG00000018525 cyhr1 (ENSHBUG00000018564) ENSHBUG00000018600 fabp3 (ENSHBUG00000018630) zcchc17 (ENSHBUG00000018638) snrnp40 (ENSHBUG00000018648) nkain1 (ENSHBUG00000018655) pum1 (ENSHBUG00000018718) SDC3 (ENSHBUG00000018726) ENSHBUG00000018741 matn1 (ENSHBUG00000018779) sesn2 (ENSHBUG00000018793) yrk (ENSHBUG00000018891) AHDC1 (ENSHBUG00000018918) Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445.e ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 P. nyererei MODERN SPECIES 323 ENSPNYG00000010506 rab25a (ENSPNYG00000010491) UBQLN4 (ENSPNYG00000010469) lim2.4 (ENSPNYG00000010457) TINAGL1 (ENSPNYG00000010424) cfap300 (ENSPNYG00000010375) KCNQ4 (ENSPNYG00000010332) nfyc (ENSPNYG00000010254) RPRD1A (ENSPNYG00000010221) fkbp9 (ENSPNYG00000010146) crtap (ENSPNYG00000010124) #27 ENSPNYG00000010102 #26 fbxl2 (ENSPNYG00000010086) #24 ENSPNYG00000010075 #21 clasp2 (ENSPNYG00000009999) #21 ubp1 (ENSPNYG00000009934) #22 pdcd6ip (ENSPNYG00000009865) cyhr1 (ENSPNYG00000009822) ENSPNYG00000009796 fabp3 (ENSPNYG00000009774) zcchc17 (ENSPNYG00000009648) snrnp40 (ENSPNYG00000009590) nkain1 (ENSPNYG00000009573) pum1 (ENSPNYG00000009518) SDC3 (ENSPNYG00000009499) matn1 (ENSPNYG00000009467) sesn2 (ENSPNYG00000009443) yrk (ENSPNYG00000009397) AHDC1 (ENSPNYG00000009375) wasf2 (ENSPNYG00000009358) gpr3 (ENSPNYG00000009348) Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.A ##21 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445.e ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Zebra mbuna MODERN SPECIES 1104 UBQLN4 (ENSMZEG00005005334) lim2.4 (ENSMZEG00005005355) TINAGL1 (ENSMZEG00005005377) cfap300 (ENSMZEG00005005410) KCNQ4 (ENSMZEG00005005425) nfyc (ENSMZEG00005005451) ENSMZEG00005005503 RPRD1A (ENSMZEG00005005518) ENSMZEG00005005529 fkbp9 (ENSMZEG00005005536) crtap (ENSMZEG00005005549) #27 ENSMZEG00005005568 #26 fbxl2 (ENSMZEG00005005587) #24 ENSMZEG00005005615 ##21 clasp2 (ENSMZEG00005005622) #21 ubp1 (ENSMZEG00005005665) #22 pdcd6ip (ENSMZEG00005005702) cyhr1 (ENSMZEG00005005727) ENSMZEG00005005750 fabp3 (ENSMZEG00005005765) zcchc17 (ENSMZEG00005005784) snrnp40 (ENSMZEG00005005797) nkain1 (ENSMZEG00005005810) pum1 (ENSMZEG00005005834) ENSMZEG00005005900 ENSMZEG00005005916 matn1 (ENSMZEG00005005935) sesn2 (ENSMZEG00005005978) yrk (ENSMZEG00005006002) AHDC1 (ENSMZEG00005006063) ENSMZEG00005006079 Eastern happy MODERN SPECIES 13 UBQLN4 (ENSACLG00000018287) lim2.4 (ENSACLG00000018324) TINAGL1 (ENSACLG00000018345) cfap300 (ENSACLG00000018413) KCNQ4 (ENSACLG00000018427) nfyc (ENSACLG00000018486) ENSACLG00000018542 RPRD1A (ENSACLG00000018571) ENSACLG00000018626 fkbp9 (ENSACLG00000018661) crtap (ENSACLG00000018729) #27 ENSACLG00000018751 #26 fbxl2 (ENSACLG00000018784) #24 ENSACLG00000018853 ##21 clasp2 (ENSACLG00000018864) #21 ubp1 (ENSACLG00000018955) #22 pdcd6ip (ENSACLG00000019017) cyhr1 (ENSACLG00000019052) ENSACLG00000019088 fabp3 (ENSACLG00000019164) zcchc17 (ENSACLG00000019174) snrnp40 (ENSACLG00000019198) nkain1 (ENSACLG00000019271) ENSACLG00000019342 pum1 (ENSACLG00000019354) SDC3 (ENSACLG00000019403) ENSACLG00000019430 matn1 (ENSACLG00000019461) sesn2 (ENSACLG00000019538) yrk (ENSACLG00000019592) AHDC1 (ENSACLG00000019654) Lyretail cichlid MODERN SPECIES 302 UBQLN4 (ENSNBRG00000011567) lim2.4 (ENSNBRG00000011542) TINAGL1 (ENSNBRG00000011501) ENSNBRG00000011490 cfap300 (ENSNBRG00000011441) KCNQ4 (ENSNBRG00000011392) nfyc (ENSNBRG00000011317) ENSNBRG00000011302 RPRD1A (ENSNBRG00000011271) fkbp9 (ENSNBRG00000011237) crtap (ENSNBRG00000011216) #27 ENSNBRG00000011187 #26 fbxl2 (ENSNBRG00000011161) #24 ENSNBRG00000011151 clasp2 (ENSNBRG00000011064) #21 ubp1 (ENSNBRG00000010962) #22 pdcd6ip (ENSNBRG00000010918) cyhr1 (ENSNBRG00000010900) ENSNBRG00000010843 fabp3 (ENSNBRG00000010816) zcchc17 (ENSNBRG00000010797) snrnp40 (ENSNBRG00000010763) nkain1 (ENSNBRG00000010742) pum1 (ENSNBRG00000010689) SDC3 (ENSNBRG00000010675) matn1 (ENSNBRG00000010639) sesn2 (ENSNBRG00000010615) yrk (ENSNBRG00000010599) AHDC1 (ENSNBRG00000010575) wasf2 (ENSNBRG00000010545) gpr3 (ENSNBRG00000010526) Nile tilapia MODERN SPECIES 13 ENSONIG00000002414 rab25a (ENSONIG00000027893) UBQLN4 (ENSONIG00000002403) LIM2 (ENSONIG00000016373) TINAGL1 (ENSONIG00000002394) cfap300 (ENSONIG00000002387) KCNQ4 (ENSONIG00000002385) nfyc (ENSONIG00000002373) ENSONIG00000040100 RPRD1A (ENSONIG00000002368) fkbp9 (ENSONIG00000002364) crtap (ENSONIG00000002363) #27 ENSONIG00000002361 #26 fbxl2 (ENSONIG00000002355) #24 clasp2 (ENSONIG00000002323) #21 ubp1 (ENSONIG00000002320) #22 pdcd6ip (ENSONIG00000002317) ENSONIG00000002315 cyhr1 (ENSONIG00000002313) ENSONIG00000029139 fabp3 (ENSONIG00000040251) zcchc17 (ENSONIG00000031036) snrnp40 (ENSONIG00000002305) nkain1 (ENSONIG00000002303) pum1 (ENSONIG00000002290) SDC3 (ENSONIG00000041022) ENSONIG00000036823 matn1 (ENSONIG00000002278) sesn2 (ENSONIG00000002274) yrk (ENSONIG00000002248) AHDC1 (ENSONIG00000022711) Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT01000000220517 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 Eupercaria ANCESTRAL SPECIES 11 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT01000000220517 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00950000182962.b.a Tetraodontidae ANCESTRAL SPECIES 20 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000165648 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000173087 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Tetraodon MODERN SPECIES 15 atxn1a (ENSTNIG00000005089) rab25a (ENSTNIG00000005090) UBQLN4 (ENSTNIG00000005091) lim2.4 (ENSTNIG00000005092) TINAGL1 (ENSTNIG00000005093) cfap300 (ENSTNIG00000003181) ENSTNIG00000000586 KCNQ4 (ENSTNIG00000003182) nfyc (ENSTNIG00000016968) RPRD1A (ENSTNIG00000016969) fkbp9 (ENSTNIG00000016970) crtap (ENSTNIG00000016971) #27 ENSTNIG00000000051 fbxl2 (ENSTNIG00000016972) #24 clasp2 (ENSTNIG00000016973) #21 ubp1 (ENSTNIG00000016974) #22 pdcd6ip (ENSTNIG00000016975) ENSTNIG00000016976 cyhr1 (ENSTNIG00000016977) ENSTNIG00000016978 fabp3 (ENSTNIG00000016979) zcchc17 (ENSTNIG00000016980) snrnp40 (ENSTNIG00000016981) nkain1 (ENSTNIG00000016982) pum1 (ENSTNIG00000016983) SDC3 (ENSTNIG00000016984) matn1 (ENSTNIG00000016985) yrk (ENSTNIG00000016986) ENSTNIG00000016987 wasf2 (ENSTNIG00000016988) sytl1 (ENSTNIG00000016989) Fugu MODERN SPECIES 3 atxn1a (ENSTRUG00000014645) ENSTRUG00000014595 UBQLN4 (ENSTRUG00000014502) LIM2 (ENSTRUG00000020756) tinagl1 (ENSTRUG00000014431) cfap300 (ENSTRUG00000014398) KCNQ4 (ENSTRUG00000014313) nfyc (ENSTRUG00000014244) ENSTRUG00000023414 RPRD1A (ENSTRUG00000014193) fkbp9 (ENSTRUG00000014068) crtap (ENSTRUG00000014024) #27 ENSTRUG00000020342 #26 fbxl2 (ENSTRUG00000013949) #24 clasp2 (ENSTRUG00000013726) #21 ubp1 (ENSTRUG00000013570) #22 pdcd6ip (ENSTRUG00000013431) ENSTRUG00000013414 cyhr1 (ENSTRUG00000013359) ENSTRUG00000025961 fabp3 (ENSTRUG00000022364) zcchc17 (ENSTRUG00000013252) snrnp40 (ENSTRUG00000013161) nkain1 (ENSTRUG00000013140) pum1 (ENSTRUG00000013121) SDC3 (ENSTRUG00000024296) ENSTRUG00000032188 sesn2 (ENSTRUG00000012703) yrk (ENSTRUG00000012570) AHDC1 (ENSTRUG00000021782) ENSTRUG00000021499 Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT01000000220517 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00950000182962.b.a Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT01000000220517 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00950000182962.b.a Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a European seabass MODERN SPECIES 22 KAT2B (ENSDLAG00005015891) ENSDLAG00005015862 ZNF385D (ENSDLAG00005015849) ENSDLAG00005015739 ENSDLAG00005015815 ENSDLAG00005015687 ENSDLAG00005015683 ENSDLAG00005015234 ENSDLAG00005015069 ENSDLAG00005033520 fkbp9 (ENSDLAG00005014859) crtap (ENSDLAG00005030248) #27 ENSDLAG00005035072 #26 fbxl2 (ENSDLAG00005014392) #24 clasp2 (ENSDLAG00005010646) #21 ubp1 (ENSDLAG00005009655) #22 pdcd6ip (ENSDLAG00005008436) ENSDLAG00005008391 cyhr1 (ENSDLAG00005034723) ENSDLAG00005008192 fabp3 (ENSDLAG00005008171) zcchc17 (ENSDLAG00005030970) snrnp40 (ENSDLAG00005007940) nkain1 (ENSDLAG00005007922) pum1 (ENSDLAG00005023846) SDC3 (ENSDLAG00005023804) ENSDLAG00005028332 matn1 (ENSDLAG00005023798) yrk (ENSDLAG00005023223) AHDC1 (ENSDLAG00005029529) gpr3 (ENSDLAG00005027580) Large yellow croaker MODERN SPECIES 484 rab25a (ENSLCRG00005016847) UBQLN4 (ENSLCRG00005016844) LIM2 (ENSLCRG00005016837) TINAGL1 (ENSLCRG00005016804) cfap300 (ENSLCRG00005016793) KCNQ4 (ENSLCRG00005016017) nfyc (ENSLCRG00005015798) ENSLCRG00005015764 ENSLCRG00005015755 ENSLCRG00005015754 fkbp9 (ENSLCRG00005015690) crtap (ENSLCRG00005015650) #27 ENSLCRG00005015641 #26 fbxl2 (ENSLCRG00005015042) #24 clasp2 (ENSLCRG00005011275) #21 ubp1 (ENSLCRG00005010163) #22 pdcd6ip (ENSLCRG00005010076) ENSLCRG00005010047 cyhr1 (ENSLCRG00005010045) ENSLCRG00005009725 fabp3 (ENSLCRG00005009677) zcchc17 (ENSLCRG00005009638) snrnp40 (ENSLCRG00005009485) nkain1 (ENSLCRG00005009472) pum1 (ENSLCRG00005008849) SDC3 (ENSLCRG00005008773) ENSLCRG00005008754 matn1 (ENSLCRG00005008752) sesn2 (ENSLCRG00005008731) yrk (ENSLCRG00005007845) ENSLCRG00005007783 Gilthead seabream MODERN SPECIES 17 ZNF385D (ENSSAUG00010009072) rab25a (ENSSAUG00010009077) UBQLN4 (ENSSAUG00010009085) LIM2 (ENSSAUG00010009090) tinagl1 (ENSSAUG00010009103) cfap300 (ENSSAUG00010009123) KCNQ4 (ENSSAUG00010009139) nfyc (ENSSAUG00010009601) ENSSAUG00010009647 RPRD1A (ENSSAUG00010000139) fkbp9 (ENSSAUG00010000230) crtap (ENSSAUG00010000356) #27 ENSSAUG00010000362 #26 fbxl2 (ENSSAUG00010000374) #24 clasp2 (ENSSAUG00010000585) #21 ubp1 (ENSSAUG00010002759) #22 pdcd6ip (ENSSAUG00010002858) ENSSAUG00010004265 cyhr1 (ENSSAUG00010004297) ENSSAUG00010004335 H-FABP (ENSSAUG00010004679) zcchc17 (ENSSAUG00010004695) snrnp40 (ENSSAUG00010004716) nkain1 (ENSSAUG00010005024) pum1 (ENSSAUG00010005028) SDC3 (ENSSAUG00010005485) ENSSAUG00010005491 matn1 (ENSSAUG00010005495) sesn2 (ENSSAUG00010005510) yrk (ENSSAUG00010005555) ENSSAUG00010005575 Perciformes ANCESTRAL SPECIES 11 ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT01000000220517 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 Perciformes_a ANCESTRAL SPECIES 14 ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Channel bull blenny MODERN SPECIES 2 ENSCGOG00000023369 ZNF385D (ENSCGOG00000023368) rab25a (ENSCGOG00000023367) UBQLN4 (ENSCGOG00000023348) LIM2 (ENSCGOG00000023346) TINAGL1 (ENSCGOG00000023343) cfap300 (ENSCGOG00000023333) KCNQ4 (ENSCGOG00000023303) nfyc (ENSCGOG00000023296) ENSCGOG00000023288 RPRD1A (ENSCGOG00000023284) fkbp9 (ENSCGOG00000023235) crtap (ENSCGOG00000023232) #27 fbxl2 (ENSCGOG00000023220) #24 clasp2 (ENSCGOG00000018571) #21 ubp1 (ENSCGOG00000018343) #22 pdcd6ip (ENSCGOG00000017809) ENSCGOG00000017791 cyhr1 (ENSCGOG00000017786) ENSCGOG00000017573 fabp3 (ENSCGOG00000017548) zcchc17 (ENSCGOG00000017543) snrnp40 (ENSCGOG00000017491) nkain1 (ENSCGOG00000017486) pum1 (ENSCGOG00000013699) SDC3 (ENSCGOG00000013609) ENSCGOG00000013606 matn1 (ENSCGOG00000013600) sesn2 (ENSCGOG00000013491) yrk (ENSCGOG00000012846) ENSCGOG00000012829 Pike perch MODERN SPECIES 41 ZNF385D (ENSSLUG00000009085) rab25a (ENSSLUG00000009075) UBQLN4 (ENSSLUG00000009055) lim2.4 (ENSSLUG00000009042) TINAGL1 (ENSSLUG00000007965) cfap300 (ENSSLUG00000007927) KCNQ4 (ENSSLUG00000007900) nfyc (ENSSLUG00000007788) ENSSLUG00000007770 RPRD1A (ENSSLUG00000007758) fkbp9 (ENSSLUG00000007663) crtap (ENSSLUG00000007641) #27 ENSSLUG00000007630 #26 fbxl2 (ENSSLUG00000007401) #24 clasp2 (ENSSLUG00000002212) #21 ubp1 (ENSSLUG00000001764) #22 pdcd6ip (ENSSLUG00000001521) ENSSLUG00000024666 cyhr1 (ENSSLUG00000024661) ENSSLUG00000024658 fabp3 (ENSSLUG00000024657) zcchc17 (ENSSLUG00000024651) snrnp40 (ENSSLUG00000024638) nkain1 (ENSSLUG00000024629) pum1 (ENSSLUG00000023878) SDC3 (ENSSLUG00000023728) ENSSLUG00000023723 matn1 (ENSSLUG00000023718) sesn2 (ENSSLUG00000023699) yrk (ENSSLUG00000023653) AHDC1 (ENSSLUG00000023634) Cottioidei ANCESTRAL SPECIES 16 ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT01000000220517 ENSGT00940000160209 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Stickleback MODERN SPECIES 9 grinaa (ENSGACG00000005238) mapk15 (ENSGACG00000005266) vps28 (ENSGACG00000005283) cap2 (ENSGACG00000005348) rbm24a (ENSGACG00000005383) nup153 (ENSGACG00000005389) PTDSS1 (ENSGACG00000005401) mterf3 (ENSGACG00000005407) uqcrb (ENSGACG00000005419) lrrc14b (ENSGACG00000005427) gatad1 (ENSGACG00000005433) ENSGACG00000005443 fbxl2 (ENSGACG00000005445) #24 ENSGACG00000005492 #21 clasp2 (ENSGACG00000005497) #21 ubp1 (ENSGACG00000005520) #22 pdcd6ip (ENSGACG00000005555) ENSGACG00000005581 ENSGACG00000005588 cyhr1 (ENSGACG00000005591) ENSGACG00000005594 fabp3 (ENSGACG00000005599) zcchc17 (ENSGACG00000005616) snrnp40 (ENSGACG00000005655) nkain1 (ENSGACG00000005700) pum1 (ENSGACG00000005717) ENSGACG00000005736 ENSGACG00000005739 matn1 (ENSGACG00000005741) sesn2 (ENSGACG00000005748) yrk (ENSGACG00000005767) Lumpfish MODERN SPECIES 2 UBQLN4 (ENSCLMG00005002604) LIM2 (ENSCLMG00005002607) ENSCLMG00005002608 TINAGL1 (ENSCLMG00005002619) cfap300 (ENSCLMG00005003216) imp4 (ENSCLMG00005003227) KCNQ4 (ENSCLMG00005003246) nfyc (ENSCLMG00005003265) ENSCLMG00005003294 RPRD1A (ENSCLMG00005003296) fkbp9 (ENSCLMG00005003305) crtap (ENSCLMG00005003578) #27 ENSCLMG00005003579 #26 fbxl2 (ENSCLMG00005003596) #24 clasp2 (ENSCLMG00005004231) #21 ubp1 (ENSCLMG00005017688) #22 pdcd6ip (ENSCLMG00005019295) ENSCLMG00005019302 cyhr1 (ENSCLMG00005019303) ENSCLMG00005019310 ENSCLMG00005019396 fabp3 (ENSCLMG00005019399) zcchc17 (ENSCLMG00005019406) snrnp40 (ENSCLMG00005019417) nkain1 (ENSCLMG00005019564) pum1 (ENSCLMG00005019565) SDC3 (ENSCLMG00005019981) matn1 (ENSCLMG00005019983) sesn2 (ENSCLMG00005019984) yrk (ENSCLMG00005019987) AHDC1 (ENSCLMG00005020023) Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 42 ankib1a (ENSLBEG00000003232) ENSLBEG00000003195 fam83hb (ENSLBEG00000003167) grinaa (ENSLBEG00000003138) mapk15 (ENSLBEG00000003106) vps28 (ENSLBEG00000003079) ENSLBEG00000003060 cap2 (ENSLBEG00000003042) rbm24a (ENSLBEG00000003025) ENSLBEG00000003003 nup153 (ENSLBEG00000002982) PTDSS1 (ENSLBEG00000002956) mterf3 (ENSLBEG00000002946) uqcrb (ENSLBEG00000002936) lrrc14b (ENSLBEG00000002930) ubp1 (ENSLBEG00000002852) #22 pdcd6ip (ENSLBEG00000002824) ENSLBEG00000002779 cyhr1 (ENSLBEG00000002750) ENSLBEG00000002697 fabp3 (ENSLBEG00000002665) zcchc17 (ENSLBEG00000002644) snrnp40 (ENSLBEG00000002611) nkain1 (ENSLBEG00000002584) pum1 (ENSLBEG00000002527) SDC3 (ENSLBEG00000002508) ENSLBEG00000002497 matn1 (ENSLBEG00000002480) sesn2 (ENSLBEG00000002464) yrk (ENSLBEG00000002440) AHDC1 (ENSLBEG00000002387) Ballan wrasse MODERN SPECIES 1407 bin2a (ENSLBEG00000005178) dazap2 (ENSLBEG00000005210) pou6f1 (ENSLBEG00000005226) ENSLBEG00000005278 #22 Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a Anabantaria ANCESTRAL SPECIES 16 ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Anabantoidei ANCESTRAL SPECIES 19 ENSGT00940000160242.b ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Climbing perch MODERN SPECIES 2 ZNF385D (ENSATEG00000014843) ENSATEG00000014851 ENSATEG00000014859 ENSATEG00000025250 ENSATEG00000014922 ENSATEG00000014937 ENSATEG00000015023 ENSATEG00000015095 ENSATEG00000015157 ENSATEG00000015171 fkbp9 (ENSATEG00000015195) crtap (ENSATEG00000015226) #27 ENSATEG00000029627 fbxl2 (ENSATEG00000015310) #24 clasp2 (ENSATEG00000015363) #21 ubp1 (ENSATEG00000015444) #22 pdcd6ip (ENSATEG00000015499) ENSATEG00000015519 cyhr1 (ENSATEG00000015544) ENSATEG00000028692 fabp3 (ENSATEG00000015920) zcchc17 (ENSATEG00000015942) snrnp40 (ENSATEG00000015948) nkain1 (ENSATEG00000015970) pum1 (ENSATEG00000016004) SDC3 (ENSATEG00000016076) matn1 (ENSATEG00000016093) sesn2 (ENSATEG00000016139) yrk (ENSATEG00000016203) ENSATEG00000016279 wasf2 (ENSATEG00000016290) Siamese fighting fish MODERN SPECIES 2 ENSBSLG00000008658 ZNF385D (ENSBSLG00000008655) rab25a (ENSBSLG00000008617) UBQLN4 (ENSBSLG00000008535) LIM2 (ENSBSLG00000008519) TINAGL1 (ENSBSLG00000008337) cfap300 (ENSBSLG00000025795) KCNQ4 (ENSBSLG00000025742) nfyc (ENSBSLG00000025658) RPRD1A (ENSBSLG00000025634) fkbp9 (ENSBSLG00000025558) crtap (ENSBSLG00000025539) #27 ENSBSLG00000025522 #26 fbxl2 (ENSBSLG00000025439) #24 clasp2 (ENSBSLG00000022768) #21 ubp1 (ENSBSLG00000022132) #22 pdcd6ip (ENSBSLG00000021280) ENSBSLG00000020316 ENSBSLG00000020306 cyhr1 (ENSBSLG00000020292) ENSBSLG00000020135 fabp3 (ENSBSLG00000020056) zcchc17 (ENSBSLG00000019979) snrnp40 (ENSBSLG00000019830) nkain1 (ENSBSLG00000019788) pum1 (ENSBSLG00000019546) SDC3 (ENSBSLG00000019515) ENSBSLG00000019511 matn1 (ENSBSLG00000019476) sesn2 (ENSBSLG00000019421) yrk (ENSBSLG00000018472) Zig-zag eel MODERN SPECIES 2 ENSMAMG00000012524 ZNF385D (ENSMAMG00000012483) ENSMAMG00000012471 ENSMAMG00000012446 ENSMAMG00000012425 ENSMAMG00000012384 ENSMAMG00000012366 ENSMAMG00000012339 ENSMAMG00000012280 ENSMAMG00000012247 fkbp9 (ENSMAMG00000012223) crtap (ENSMAMG00000012213) #27 ENSMAMG00000012197 #26 fbxl2 (ENSMAMG00000012170) #24 clasp2 (ENSMAMG00000011902) #21 ubp1 (ENSMAMG00000011804) #22 pdcd6ip (ENSMAMG00000011771) ENSMAMG00000011755 cyhr1 (ENSMAMG00000011735) ENSMAMG00000011727 fabp3 (ENSMAMG00000026283) zcchc17 (ENSMAMG00000011701) snrnp40 (ENSMAMG00000011680) nkain1 (ENSMAMG00000011666) pum1 (ENSMAMG00000011606) ENSMAMG00000011597 SDC3 (ENSMAMG00000011593) matn1 (ENSMAMG00000011559) sesn2 (ENSMAMG00000011556) yrk (ENSMAMG00000011539) ENSMAMG00000011526 Carangaria ANCESTRAL SPECIES 14 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT00940000160209 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00950000182962.b.a Carangaria_A ANCESTRAL SPECIES 16 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Seriola ANCESTRAL SPECIES 12 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT01100000263710 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000168856 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Greater amberjack MODERN SPECIES 48 UBQLN4 (ENSSDUG00000009691) lim2.4 (ENSSDUG00000009670) TINAGL1 (ENSSDUG00000009649) cfap300 (ENSSDUG00000009628) ENSSDUG00000009618 KCNQ4 (ENSSDUG00000009542) nfyc (ENSSDUG00000009492) ENSSDUG00000009470 RPRD1A (ENSSDUG00000009440) fkbp9 (ENSSDUG00000009427) crtap (ENSSDUG00000009411) #27 ENSSDUG00000009403 #26 fbxl2 (ENSSDUG00000009383) #24 ENSSDUG00000009369 clasp2 (ENSSDUG00000009311) #21 ubp1 (ENSSDUG00000009258) #22 ENSSDUG00000009214 ENSSDUG00000009188 cyhr1 (ENSSDUG00000009157) ENSSDUG00000009135 fabp3 (ENSSDUG00000009119) zcchc17 (ENSSDUG00000009095) snrnp40 (ENSSDUG00000009073) nkain1 (ENSSDUG00000009061) pum1 (ENSSDUG00000009021) SDC3 (ENSSDUG00000009005) matn1 (ENSSDUG00000008977) sesn2 (ENSSDUG00000008919) yrk (ENSSDUG00000008865) AHDC1 (ENSSDUG00000008843) ENSSDUG00000008827 Yellowtail amberjack MODERN SPECIES 2890 rab25a (ENSSLDG00000010880) UBQLN4 (ENSSLDG00000010839) lim2.4 (ENSSLDG00000010807) TINAGL1 (ENSSLDG00000010762) cfap300 (ENSSLDG00000010739) KCNQ4 (ENSSLDG00000010705) nfyc (ENSSLDG00000010606) ENSSLDG00000010572 RPRD1A (ENSSLDG00000010537) fkbp9 (ENSSLDG00000010478) crtap (ENSSLDG00000010447) #27 ENSSLDG00000010419 #26 fbxl2 (ENSSLDG00000010355) #24 ENSSLDG00000010321 clasp2 (ENSSLDG00000010239) #21 ubp1 (ENSSLDG00000010188) #22 ENSSLDG00000010078 ENSSLDG00000010034 cyhr1 (ENSSLDG00000009992) ENSSLDG00000009980 ENSSLDG00000009966 fabp3 (ENSSLDG00000009949) zcchc17 (ENSSLDG00000009837) snrnp40 (ENSSLDG00000009778) nkain1 (ENSSLDG00000009742) pum1 (ENSSLDG00000009667) SDC3 (ENSSLDG00000009649) matn1 (ENSSLDG00000009602) sesn2 (ENSSLDG00000009540) yrk (ENSSLDG00000009505) AHDC1 (ENSSLDG00000009452) Barramundi perch MODERN SPECIES 163 ENSLCAG00010009645 rab25a (ENSLCAG00010009636) UBQLN4 (ENSLCAG00010009627) lim2.4 (ENSLCAG00010009621) TINAGL1 (ENSLCAG00010009612) cfap300 (ENSLCAG00010009599) KCNQ4 (ENSLCAG00010009592) nfyc (ENSLCAG00010009584) ENSLCAG00010009576 RPRD1A (ENSLCAG00010009573) fkbp9 (ENSLCAG00010009525) crtap (ENSLCAG00010009497) #27 ENSLCAG00010009488 #26 fbxl2 (ENSLCAG00010009485) #24 clasp2 (ENSLCAG00010008731) #21 ubp1 (ENSLCAG00010008477) #22 pdcd6ip (ENSLCAG00010008358) ENSLCAG00010008314 cyhr1 (ENSLCAG00010008295) ENSLCAG00010008219 fabp3 (ENSLCAG00010008193) zcchc17 (ENSLCAG00010008172) snrnp40 (ENSLCAG00010008123) nkain1 (ENSLCAG00010008114) pum1 (ENSLCAG00010008106) ENSLCAG00010008092 ENSLCAG00010008089 matn1 (ENSLCAG00010008083) sesn2 (ENSLCAG00010008057) yrk (ENSLCAG00010008022) AHDC1 (ENSLCAG00010007997) Pleuronectoidei ANCESTRAL SPECIES 15 ENSGT00940000158230.b.b ENSGT00940000155620.q ENSGT01050000244814.a.a.b.b.b.a.a.d.b ENSGT00940000160023 ENSGT00510000047559 ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00940000157125 ENSGT00940000153814.a #27 ENSGT00390000009163 #26 ENSGT00940000153845.a.b #24 ENSGT00940000177252 ENSGT00940000155574.C #21 ENSGT00940000156148 #22 ENSGT00940000163083 ENSGT00940000155609.l ENSGT00390000018258 ENSGT00940000159476 ENSGT00940000155104 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000175655 ENSGT00940000158079 ENSGT00940000160209 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 Turbot MODERN SPECIES 14 SDC3 (ENSSMAG00000011055) pum1 (ENSSMAG00000010918) nkain1 (ENSSMAG00000010877) snrnp40 (ENSSMAG00000010857) zcchc17 (ENSSMAG00000023280) fabp3 (ENSSMAG00000026107) ENSSMAG00000010800 cyhr1 (ENSSMAG00000010771) ENSSMAG00000010735 pdcd6ip (ENSSMAG00000010694) fkbp9 (ENSSMAG00000010666) crtap (ENSSMAG00000010631) #27 ENSSMAG00000010596 #26 fbxl2 (ENSSMAG00000010521) #24 clasp2 (ENSSMAG00000010193) #21 ubp1 (ENSSMAG00000010036) #22 ENSSMAG00000010001 ENSSMAG00000009961 ENSSMAG00000009905 ENSSMAG00000009872 ENSSMAG00000009852 ENSSMAG00000009811 ENSSMAG00000009791 ENSSMAG00000009738 ENSSMAG00000035677 ZNF385D (ENSSMAG00000009709) ENSSMAG00000009694 ENSSMAG00000009616 RAB5A (ENSSMAG00000009229) otud6b (ENSSMAG00000009196) runx1t1 (ENSSMAG00000009153) Tongue sole MODERN SPECIES 9 ENSCSEG00000017220 nfyc (ENSCSEG00000017202) KCNQ4 (ENSCSEG00000017158) cfap300 (ENSCSEG00000017145) TINAGL1 (ENSCSEG00000017097) lim2.4 (ENSCSEG00000017089) ENSCSEG00000017082 UBQLN4 (ENSCSEG00000017036) rab25a (ENSCSEG00000017026) ENSCSEG00000017005 ENSCSEG00000016989 kat2b (ENSCSEG00000016972) fbxl2 (ENSCSEG00000016957) #24 ENSCSEG00000016948 clasp2 (ENSCSEG00000016910) #21 ubp1 (ENSCSEG00000016364) #22 pdcd6ip (ENSCSEG00000016266) cyhr1 (ENSCSEG00000016245) ENSCSEG00000016146 fabp3 (ENSCSEG00000016106) zcchc17 (ENSCSEG00000016039) snrnp40 (ENSCSEG00000016015) nkain1 (ENSCSEG00000016008) ENSCSEG00000016001 pum1 (ENSCSEG00000015981) SDC3 (ENSCSEG00000015975) matn1 (ENSCSEG00000015965) sesn2 (ENSCSEG00000015952) yrk (ENSCSEG00000015945) AHDC1 (ENSCSEG00000015938) wasf2 (ENSCSEG00000015926)