Amniota	ANCESTRAL SPECIES	7	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263710	ENSGT00940000177252	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B ##27	ENSGT00550000075117	ENSGT00950000183099.u.b	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00940000160239	ENSGT00390000003571	ENSGT00940000155697.A
Mammalia	ANCESTRAL SPECIES	4	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263710	ENSGT00940000177252	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B ##27	ENSGT00550000075117	ENSGT00950000183099.u.a	ENSGT00950000183099.u.b.a	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00940000160239	ENSGT00390000003571
Theria	ANCESTRAL SPECIES		ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263710	ENSGT00940000177252	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B ##27	ENSGT00550000075117	ENSGT00950000183099.u.a	ENSGT00940000164532	ENSGT00950000183099.u.b.a.a.a.a	ENSGT01050000244942.b.a.b	ENSGT00950000183099.v	ENSGT00950000183138.a.a.b
Eutheria	ANCESTRAL SPECIES	5	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263710	ENSGT00940000177252	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000179751	ENSGT00940000157880 #36
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263710	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000179751	ENSGT00940000157880 #36
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Primates	ANCESTRAL SPECIES	1	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Haplorrhini	ANCESTRAL SPECIES	5	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00940000153169.A.b.b.a.a.a.b	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00390000009837.a.b #14	ENSGT00940000153370.b #15	ENSGT00390000005727.a.b.a.a.c #16	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000002414.`b.b #30	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00940000153309.c.a.e	ENSGT00390000003114.e.b.b #35
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00940000153169.A.b.b.a.a.a.b	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00390000009837.a.b #14	ENSGT00940000153370.b #15	ENSGT00390000005727.a.b.a.a.c #16	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000002414.`b.b #30	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00940000153309.c.a.e.b	ENSGT00390000003114.e.b.b #35
Hominidae	ANCESTRAL SPECIES	2	ENSGT00390000001627.f.a	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00390000009837.a.b #14	ENSGT00940000153370.b #15	ENSGT00390000005727.a.b.a.a.c #16	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000002414.`b.b #30	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00390000009837.a.b #14	ENSGT00940000153370.b #15	ENSGT00390000005727.a.b.a.a.c #16	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000002414.`b.b #30	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36
Gorilla	MODERN SPECIES	16	ITGA9 (ENSGGOG00000013044) #7	ENSGGOG00000023150 #8	GOLGA4 (ENSGGOG00000023859) #9	LRRFIP2 (ENSGGOG00000001784) #10	ENSGGOG00000041659 #11	MLH1 (ENSGGOG00000016342) #12	EPM2AIP1 (ENSGGOG00000027478) #13	ENSGGOG00000041962 #14	TRANK1 (ENSGGOG00000005691) #15	ENSGGOG00000042033 #16	DCLK3 (ENSGGOG00000016779) #17	STAC (ENSGGOG00000013526) #18	ARPP21 (ENSGGOG00000009337) #19	ENSGGOG00000024787 #20	CLASP2 (ENSGGOG00000003446) #21	UBP1 (ENSGGOG00000023919) #22	FBXL2 (ENSGGOG00000002522) #23	SUSD5 (ENSGGOG00000038282) #24	CRTAP (ENSGGOG00000015793) #25	GLB1 (ENSGGOG00000015782) #26	CCR4 (ENSGGOG00000013366) #27	TRIM71 (ENSGGOG00000017133) #28	CNOT10 (ENSGGOG00000000171) #29	ENSGGOG00000036732 #30	DYNC1LI1 (ENSGGOG00000015987) #31	CMTM6 (ENSGGOG00000042309) #32	ENSGGOG00000000777 #33	CMTM8 (ENSGGOG00000006035) #34	GPD1L (ENSGGOG00000007182) #35	OSBPL10 (ENSGGOG00000013853) #36	STT3B (ENSGGOG00000013180) #37
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00390000001627.f.a	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00390000009837.a.b #14	ENSGT00940000153370.b #15	ENSGT00390000005727.a.b.a.a.c #16	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000002414.`b.b #30	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000154397.b.c.b.b
Pan	ANCESTRAL SPECIES	2	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00390000007084.c.b.k.a.b ##11	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00390000009837.a.b #14	ENSGT00940000153370.b #15	ENSGT00390000005727.a.b.a.a.c #16	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00950000182901.a.a.b.b.a.b.a.b.b.b	ENSGT00390000013700.n	ENSGT00390000001827 #29	ENSGT00390000002414.`b.b #30	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35
Chimpanzee	MODERN SPECIES	16	ITGA9 (ENSPTRG00000014748) #7	ENSPTRG00000023429 #8	GOLGA4 (ENSPTRG00000014746) #9	LRRFIP2 (ENSPTRG00000014745) #10	ENSPTRG00000016733 ##11	MLH1 (ENSPTRG00000014743) #12	EPM2AIP1 (ENSPTRG00000042530) #13	ENSPTRG00000051367 #14	TRANK1 (ENSPTRG00000014741) #15	ENSPTRG00000045315 #16	DCLK3 (ENSPTRG00000014739) #17	STAC (ENSPTRG00000014737) #18	ARPP21 (ENSPTRG00000014736) #19	PDCD6IP (ENSPTRG00000014735)	CLASP2 (ENSPTRG00000014734) #21	UBP1 (ENSPTRG00000014733) #22	FBXL2 (ENSPTRG00000014732) #23	SUSD5 (ENSPTRG00000041864) #24	CRTAP (ENSPTRG00000014728) #25	GLB1 (ENSPTRG00000014726) #26	CCR4 (ENSPTRG00000014725) #27	TRIM71 (ENSPTRG00000030286) #28	ENSPTRG00000044387	ENSPTRG00000046880	CNOT10 (ENSPTRG00000014722) #29	ENSPTRG00000042309 #30	DYNC1LI1 (ENSPTRG00000014721) #31	CMTM6 (ENSPTRG00000043555) #32	CMTM7 (ENSPTRG00000014719) #33	CMTM8 (ENSPTRG00000014717) #34	GPD1L (ENSPTRG00000043993) #35
Bonobo	MODERN SPECIES	16	ENSPPAG00000040137 #8	GOLGA4 (ENSPPAG00000035295) #9	LRRFIP2 (ENSPPAG00000039105) #10	ENSPPAG00000023507 ##11	MLH1 (ENSPPAG00000031143) #12	EPM2AIP1 (ENSPPAG00000021277) #13	ENSPPAG00000031051 #14	TRANK1 (ENSPPAG00000031125) #15	ENSPPAG00000032170 #16	ENSPPAG00000028394 #17	STAC (ENSPPAG00000039982) #18	ENSPPAG00000043215	ARPP21 (ENSPPAG00000032910) #19	PDCD6IP (ENSPPAG00000029413)	CLASP2 (ENSPPAG00000024744) #21	UBP1 (ENSPPAG00000028421) #22	FBXL2 (ENSPPAG00000031583) #23	SUSD5 (ENSPPAG00000022450) #24	CRTAP (ENSPPAG00000039721) #25	GLB1 (ENSPPAG00000037867) #26	CCR4 (ENSPPAG00000008693) #27	TRIM71 (ENSPPAG00000028362) #28	ENSPPAG00000036093	ENSPPAG00000033853	CNOT10 (ENSPPAG00000027061) #29	ENSPPAG00000001545 #30	DYNC1LI1 (ENSPPAG00000036438) #31	CMTM6 (ENSPPAG00000034787) #32	ENSPPAG00000034531 #33	CMTM8 (ENSPPAG00000031220) #34	GPD1L (ENSPPAG00000037452) #35
Human	MODERN SPECIES	15	DLEC1 (ENSG00000008226)	PLCD1 (ENSG00000187091)	VILL (ENSG00000136059)	CTDSPL (ENSG00000144677)	ITGA9 (ENSG00000144668) #7	GOLGA4 (ENSG00000144674) #9	LRRFIP2 (ENSG00000093167) #10	MLH1 (ENSG00000076242) #12	EPM2AIP1 (ENSG00000178567) #13	TRANK1 (ENSG00000168016) #15	DCLK3 (ENSG00000163673) #17	STAC (ENSG00000144681) #18	ARPP21 (ENSG00000172995) #19	PDCD6IP (ENSG00000170248)	CLASP2 (ENSG00000163539) #21	UBP1 (ENSG00000153560) #22	FBXL2 (ENSG00000153558) #23	SUSD5 (ENSG00000173705) #24	CRTAP (ENSG00000170275) #25	TMPPE (ENSG00000188167)	GLB1 (ENSG00000170266) #26	CCR4 (ENSG00000183813) #27	TRIM71 (ENSG00000206557) #28	CNOT10 (ENSG00000182973) #29	DYNC1LI1 (ENSG00000144635) #31	CMTM6 (ENSG00000091317) #32	CMTM7 (ENSG00000153551) #33	CMTM8 (ENSG00000170293) #34	GPD1L (ENSG00000152642) #35	ZNF860 (ENSG00000197385)	OSBPL10 (ENSG00000144645) #36
Orangutan	MODERN SPECIES	16	ACAA1 (ENSPPYG00000014012)	DLEC1 (ENSPPYG00000014013)	PLCD1 (ENSPPYG00000014014)	VILL (ENSPPYG00000014015)	CTDSPL (ENSPPYG00000037385)	ITGA9 (ENSPPYG00000014017) #7	GOLGA4 (ENSPPYG00000014019) #9	LRRFIP2 (ENSPPYG00000014020) #10	MLH1 (ENSPPYG00000014021) #12	TRANK1 (ENSPPYG00000014023) #15	DCLK3 (ENSPPYG00000014025) #17	STAC (ENSPPYG00000014026) #18	ARPP21 (ENSPPYG00000014027) #19	PDCD6IP (ENSPPYG00000014028)	CLASP2 (ENSPPYG00000014029) #21	UBP1 (ENSPPYG00000014030) #22	FBXL2 (ENSPPYG00000014031) #23	SUSD5 (ENSPPYG00000014032) #24	CRTAP (ENSPPYG00000031727) #25	GLB1 (ENSPPYG00000014034) #26	TRIM71 (ENSPPYG00000014036) #28	CNOT10 (ENSPPYG00000014038) #29	ENSPPYG00000038202	DYNC1LI1 (ENSPPYG00000014039) #31	CMTM6 (ENSPPYG00000014040) #32	CMTM7 (ENSPPYG00000037433) #33	CMTM8 (ENSPPYG00000014042) #34	GPD1L (ENSPPYG00000014044) #35	OSBPL10 (ENSPPYG00000014045) #36	STT3B (ENSPPYG00000014047) #37	GADL1 (ENSPPYG00000014048)
Gibbon	MODERN SPECIES	19	ENSNLEG00000005086 #8	GOLGA4 (ENSNLEG00000005062) #9	LRRFIP2 (ENSNLEG00000004992) #10	ENSNLEG00000033765	MLH1 (ENSNLEG00000004886) #12	EPM2AIP1 (ENSNLEG00000018533) #13	TRANK1 (ENSNLEG00000004872) #15	ENSNLEG00000028218 #16	DCLK3 (ENSNLEG00000004871) #17	ENSNLEG00000033044	STAC (ENSNLEG00000004845) #18	ARPP21 (ENSNLEG00000004823) #19	ENSNLEG00000028397	PDCD6IP (ENSNLEG00000004764)	CLASP2 (ENSNLEG00000004683) #21	UBP1 (ENSNLEG00000004651) #22	FBXL2 (ENSNLEG00000004561) #23	SUSD5 (ENSNLEG00000004546) #24	CRTAP (ENSNLEG00000004534) #25	GLB1 (ENSNLEG00000004433) #26	ENSNLEG00000035991	CCR4 (ENSNLEG00000018532) #27	TRIM71 (ENSNLEG00000004428) #28	ENSNLEG00000031285	CNOT10 (ENSNLEG00000004347) #29	ENSNLEG00000029679	DYNC1LI1 (ENSNLEG00000004303) #31	ENSNLEG00000034778	CMTM6 (ENSNLEG00000004289) #32	CMTM7 (ENSNLEG00000027296) #33	CMTM8 (ENSNLEG00000030002) #34
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00940000162610	ENSGT00950000183084.b.b	ENSGT00940000161858	ENSGT00940000165055	ENSGT00940000157053	ENSGT00940000159828	ENSGT00550000074917	ENSGT00940000153783.b.b.c.a.a.a.e.a	ENSGT00940000153404.a.m.a.b	ENSGT00860000135739	ENSGT00950000182930.B	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000002414.`b.b #30	ENSGT00390000008295.b #31	ENSGT00940000157911.a #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00940000153309.c.a.e	ENSGT00390000003114.e.b.b #35
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00510000047914.b	ENSGT00940000162610	ENSGT00950000183084.b.b	ENSGT00940000161858	ENSGT00940000165055	ENSGT00940000157053	ENSGT00940000159828	ENSGT00550000074917	ENSGT00940000153783.b.b.c.a.a.a.e.a	ENSGT00860000135739	ENSGT00950000182930.B	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000002414.`b.b #30	ENSGT00390000008295.b #31	ENSGT00940000157911.a #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00940000153309.c.a.e	ENSGT00390000003114.e.b.b #35
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00950000183084.b.b	ENSGT00940000161858	ENSGT00940000165055	ENSGT00940000157053	ENSGT00940000159828	ENSGT00550000074917	ENSGT00940000153783.b.b.c.a.a.a.e.a	ENSGT00860000135739	ENSGT00940000153404.a.m.a.b	ENSGT00950000182930.B	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00500000045558.b	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000002414.`b.b #30	ENSGT00390000008295.b #31	ENSGT00940000157911.a #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00940000153309.c.a.e	ENSGT00390000003114.e.b.b #35
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00950000183084.b.b	ENSGT00940000161858	ENSGT00940000165055	ENSGT00940000157053	ENSGT00940000159828	ENSGT00550000074917	ENSGT00940000153783.b.b.c.a.a.a.e.a	ENSGT00860000135739	ENSGT00940000153404.a.m.a.b	ENSGT00950000182930.B	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00500000045558.b	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000002414.`b.b #30	ENSGT00390000008295.b #31	ENSGT00940000157911.a #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Cercopithecinae_d	ANCESTRAL SPECIES	16	ENSGT00940000162610	ENSGT00950000183084.b.b	ENSGT00940000161858	ENSGT00940000157053	ENSGT00940000159828	ENSGT00550000074917	ENSGT00940000153783.b.b.c.a.a.a.e.a	ENSGT00860000135739	ENSGT00940000153404.a.m.a.b	ENSGT00950000182930.B	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00500000045558.b	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000013700.n	ENSGT00950000183030.m.a.a.b.b.b.a.a	ENSGT00390000002414.`b.b #30	ENSGT00390000008295.b #31	ENSGT00940000157911.a #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35
Sooty mangabey	MODERN SPECIES	458	RTP4 (ENSCATG00000040867)	MASP1 (ENSCATG00000018550)	RTP1 (ENSCATG00000044988)	ST6GAL1 (ENSCATG00000045114)	ADIPOQ (ENSCATG00000042041)	RFC4 (ENSCATG00000030055)	ENSCATG00000039271	ENSCATG00000041517	ENSCATG00000042744	KNG1 (ENSCATG00000033074)	STAC (ENSCATG00000043527) #18	ARPP21 (ENSCATG00000032088) #19	ENSCATG00000039078	PDCD6IP (ENSCATG00000039590)	CLASP2 (ENSCATG00000037976) #21	UBP1 (ENSCATG00000038795) #22	FBXL2 (ENSCATG00000036185) #23	ENSCATG00000033646	ENSCATG00000041937 #24	ENSCATG00000008562 #25	GLB1 (ENSCATG00000030809) #26	CCR4 (ENSCATG00000006477) #27	TRIM71 (ENSCATG00000039860) #28	CNOT10 (ENSCATG00000034330) #29	ENSCATG00000032297	ENSCATG00000000280	ENSCATG00000039673 #30	DYNC1LI1 (ENSCATG00000041634) #31	ENSCATG00000030998 #32	CMTM7 (ENSCATG00000014394) #33	CMTM8 (ENSCATG00000033422) #34
Drill	MODERN SPECIES	1369														ENSMLEG00000032828 #21	ENSMLEG00000041818 #21	UBP1 (ENSMLEG00000032119) #22	FBXL2 (ENSMLEG00000036278) #23	ENSMLEG00000040122	SUSD5 (ENSMLEG00000030779) #24	CRTAP (ENSMLEG00000035569) #25	GLB1 (ENSMLEG00000001975) #26	TRIM71 (ENSMLEG00000031204) #28
Olive baboon	MODERN SPECIES	11	RPL39L (ENSPANG00000040014)	ST6GAL1 (ENSPANG00000024521)	ENSPANG00000049097	ADIPOQ (ENSPANG00000042519)	RFC4 (ENSPANG00000023162)	EIF4A2 (ENSPANG00000014790)	KNG1 (ENSPANG00000012547)	ENSPANG00000045351	STAC (ENSPANG00000016680) #18	ARPP21 (ENSPANG00000009589) #19	ENSPANG00000034552	ENSPANG00000033986	ENSPANG00000049104 #20	ENSPANG00000018324	CLASP2 (ENSPANG00000006443) #21	UBP1 (ENSPANG00000003702) #22	FBXL2 (ENSPANG00000015885) #23	SUSD5 (ENSPANG00000015211) #24	CRTAP (ENSPANG00000001273) #25	GLB1 (ENSPANG00000008353) #26	CCR4 (ENSPANG00000006844) #27	ENSPANG00000037975	TRIM71 (ENSPANG00000029367) #28	ENSPANG00000009828	CNOT10 (ENSPANG00000023942) #29	ENSPANG00000039107	DYNC1LI1 (ENSPANG00000018878) #31	CMTM6 (ENSPANG00000016560) #32	CMTM7 (ENSPANG00000006660) #33	CMTM8 (ENSPANG00000009764) #34	GPD1L (ENSPANG00000009800) #35
Macaca	ANCESTRAL SPECIES	5	ENSGT00950000183084.b.b	ENSGT00940000161858	ENSGT00940000165055	ENSGT00940000157053	ENSGT00940000159828	ENSGT00550000074917	ENSGT00940000153783.b.b.c.a.a.a.e.a	ENSGT00860000135739	ENSGT00940000153404.a.m.a.b	ENSGT00950000182930.B	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00500000045558.b	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000002414.`b.b #30	ENSGT00390000008295.b #31	ENSGT00940000157911.a #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00940000153309.c.a.e	ENSGT00390000003114.e.b.b #35
Pig-tailed macaque	MODERN SPECIES	467	MASP1 (ENSMNEG00000031506)	RTP1 (ENSMNEG00000043982)	RPL39L (ENSMNEG00000002491)	ST6GAL1 (ENSMNEG00000019258)	ADIPOQ (ENSMNEG00000043042)	RFC4 (ENSMNEG00000039111)	ENSMNEG00000037282	ENSMNEG00000037200	ENSMNEG00000035119	KNG1 (ENSMNEG00000044746)	STAC (ENSMNEG00000041036) #18	ARPP21 (ENSMNEG00000044015) #19	ENSMNEG00000041440	PDCD6IP (ENSMNEG00000043620)	CLASP2 (ENSMNEG00000039636) #21	UBP1 (ENSMNEG00000044287) #22	FBXL2 (ENSMNEG00000034856) #23	ENSMNEG00000023330	SUSD5 (ENSMNEG00000041063) #24	CRTAP (ENSMNEG00000041104) #25	GLB1 (ENSMNEG00000035974) #26	CCR4 (ENSMNEG00000015017) #27	TRIM71 (ENSMNEG00000030331) #28	CNOT10 (ENSMNEG00000039743) #29	ENSMNEG00000030223 #30	DYNC1LI1 (ENSMNEG00000031282) #31	CMTM6 (ENSMNEG00000035614) #32	CMTM7 (ENSMNEG00000045324) #33	CMTM8 (ENSMNEG00000042143) #34	ENSMNEG00000030537	GPD1L (ENSMNEG00000036490) #35
Macaca_a	ANCESTRAL SPECIES	5	ENSGT00510000047914.b	ENSGT00940000162610	ENSGT00950000183084.b.b	ENSGT00940000161858	ENSGT00940000157053	ENSGT00940000159828	ENSGT00550000074917	ENSGT00940000153783.b.b.c.a.a.a.e.a	ENSGT00860000135739	ENSGT00950000182930.B	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00500000045558.b	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01040000240667.a.b	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911.a #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT01050000245374.a
Rhesus	MODERN SPECIES	11	RTP4 (ENSMMUG00000013007)	RTP1 (ENSMMUG00000052643)	ST6GAL1 (ENSMMUG00000014905)	ADIPOQ (ENSMMUG00000002684)	RFC4 (ENSMMUG00000003704)	EIF4A2 (ENSMMUG00000003702)	ENSMMUG00000057833	KNG1 (ENSMMUG00000003700)	STAC (ENSMMUG00000009614) #18	ARPP21 (ENSMMUG00000015959) #19	ENSMMUG00000021448	ENSMMUG00000063957	ENSMMUG00000051294	PDCD6IP (ENSMMUG00000014069)	CLASP2 (ENSMMUG00000031438) #21	UBP1 (ENSMMUG00000016917) #22	FBXL2 (ENSMMUG00000031439) #23	SUSD5 (ENSMMUG00000007627) #24	CRTAP (ENSMMUG00000009010) #25	GLB1 (ENSMMUG00000020109) #26	TMPPE (ENSMMUG00000052664)	ENSMMUG00000061607	CCR4 (ENSMMUG00000022661) #27	ENSMMUG00000059049	TRIM71 (ENSMMUG00000004538) #28	CNOT10 (ENSMMUG00000006596) #29	DYNC1LI1 (ENSMMUG00000005465) #31	CMTM6 (ENSMMUG00000001443) #32	CMTM7 (ENSMMUG00000009931) #33	ENSMMUG00000058979	CMTM8 (ENSMMUG00000012675) #34
Crab-eating macaque	MODERN SPECIES	11	RTP4 (ENSMFAG00000037745)	MASP1 (ENSMFAG00000040221)	RTP1 (ENSMFAG00000056809)	ST6GAL1 (ENSMFAG00000062040)	ENSMFAG00000055097	ADIPOQ (ENSMFAG00000000511)	RFC4 (ENSMFAG00000030286)	EIF4A2 (ENSMFAG00000044567)	ENSMFAG00000002146	KNG1 (ENSMFAG00000041180)	STAC (ENSMFAG00000054211) #18	ARPP21 (ENSMFAG00000041762) #19	ENSMFAG00000012603	PDCD6IP (ENSMFAG00000043863)	CLASP2 (ENSMFAG00000001444) #21	UBP1 (ENSMFAG00000035445) #22	FBXL2 (ENSMFAG00000032187) #23	SUSD5 (ENSMFAG00000033317) #24	ENSMFAG00000065268	CRTAP (ENSMFAG00000017424) #25	GLB1 (ENSMFAG00000005291) #26	TMPPE (ENSMFAG00000061512)	CCR4 (ENSMFAG00000016035) #27	ENSMFAG00000064357	CNOT10 (ENSMFAG00000041243) #29	DYNC1LI1 (ENSMFAG00000031574) #31	CMTM6 (ENSMFAG00000003973) #32	CMTM7 (ENSMFAG00000031701) #33	CMTM8 (ENSMFAG00000031079) #34	GPD1L (ENSMFAG00000032829) #35	OSBPL10 (ENSMFAG00000046094) #36
Vervet Monkey	MODERN SPECIES	6	RTP4 (ENSCSAG00000009173)	MASP1 (ENSCSAG00000009191)	RTP1 (ENSCSAG00000009199)	RPL39L (ENSCSAG00000018929)	ST6GAL1 (ENSCSAG00000009201)	ADIPOQ (ENSCSAG00000009208)	RFC4 (ENSCSAG00000009218)	EIF4A2 (ENSCSAG00000009233)	ENSCSAG00000009249	KNG1 (ENSCSAG00000009254)	STAC (ENSCSAG00000009305) #18	ARPP21 (ENSCSAG00000009323) #19	ENSCSAG00000009330	PDCD6IP (ENSCSAG00000009342)	CLASP2 (ENSCSAG00000009374) #21	UBP1 (ENSCSAG00000009395) #22	FBXL2 (ENSCSAG00000009410) #23	SUSD5 (ENSCSAG00000009416) #24	CRTAP (ENSCSAG00000009478) #25	GLB1 (ENSCSAG00000009502) #26	CCR4 (ENSCSAG00000018927) #27	TRIM71 (ENSCSAG00000009512) #28	CNOT10 (ENSCSAG00000009525) #29	DYNC1LI1 (ENSCSAG00000009575) #31	CMTM6 (ENSCSAG00000009588) #32	CMTM7 (ENSCSAG00000009595) #33	CMTM8 (ENSCSAG00000009600) #34	GPD1L (ENSCSAG00000009615) #35	OSBPL10 (ENSCSAG00000009622) #36	STT3B (ENSCSAG00000009633) #37	GADL1 (ENSCSAG00000009641)
Rhinopithecus	ANCESTRAL SPECIES	508														ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000000673.b.c.a	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28
Golden snub-nosed monkey	MODERN SPECIES	1702												ENSRROG00000026236	ENSRROG00000036388	PDCD6IP (ENSRROG00000033332)	CLASP2 (ENSRROG00000030491) #21	UBP1 (ENSRROG00000031139) #22	FBXL2 (ENSRROG00000041276) #23	SUSD5 (ENSRROG00000036461) #24	CRTAP (ENSRROG00000035900) #25	GLB1 (ENSRROG00000035705) #26	CCR4 (ENSRROG00000025574) #27	TRIM71 (ENSRROG00000043296) #28
Black snub-nosed monkey	MODERN SPECIES	1109														PDCD6IP (ENSRBIG00000034607)	CLASP2 (ENSRBIG00000044765) #21	UBP1 (ENSRBIG00000037949) #22	FBXL2 (ENSRBIG00000029151) #23	ENSRBIG00000018330	SUSD5 (ENSRBIG00000041093) #24	CRTAP (ENSRBIG00000027582) #25	GLB1 (ENSRBIG00000033594) #26	CCR4 (ENSRBIG00000031120) #27
Platyrrhini	ANCESTRAL SPECIES	22	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177.a #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00940000154222.d.b.d.a.a	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000015060.p	ENSGT00390000008295.b #31	ENSGT00870000136549.d	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34
Cebidae	ANCESTRAL SPECIES	22	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177.a #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00940000154222.d.b.d.a.a	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000015060.p	ENSGT00390000008295.b #31	ENSGT00870000136549.d	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35
Cebidae_a	ANCESTRAL SPECIES	12	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177.a #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00940000154222.d.b.d.a.a	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000015060.p	ENSGT00390000008295.b #31	ENSGT00870000136549.d	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35
Capuchin	MODERN SPECIES	21												ARPP21 (ENSCCAG00000032940) #19	PDCD6IP (ENSCCAG00000033058)	ENSCCAG00000020300	CLASP2 (ENSCCAG00000000695) #21	UBP1 (ENSCCAG00000025627) #22	ENSCCAG00000025092	FBXL2 (ENSCCAG00000025865) #23	ENSCCAG00000020103	SUSD5 (ENSCCAG00000023728) #24	CRTAP (ENSCCAG00000021761) #25	GLB1 (ENSCCAG00000037373) #26	CCR4 (ENSCCAG00000019573) #27	TRIM71 (ENSCCAG00000024597) #28	CNOT10 (ENSCCAG00000020746) #29	ENSCCAG00000019874	ENSCCAG00000014618	DYNC1LI1 (ENSCCAG00000025596) #31	ENSCCAG00000031054	CMTM6 (ENSCCAG00000036050) #32	CMTM7 (ENSCCAG00000021122) #33
Bolivian squirrel monkey	MODERN SPECIES	83	ITGA9 (ENSSBOG00000029467) #7	ENSSBOG00000030298 #8	GOLGA4 (ENSSBOG00000020464) #9	LRRFIP2 (ENSSBOG00000022125) #10	MLH1 (ENSSBOG00000027454) #12	EPM2AIP1 (ENSSBOG00000019592) #13	ENSSBOG00000024937	TRANK1 (ENSSBOG00000032312) #15	DCLK3 (ENSSBOG00000033741) #17	STAC (ENSSBOG00000026974) #18	ENSSBOG00000032297	ARPP21 (ENSSBOG00000029427) #19	ENSSBOG00000025175 #20	CLASP2 (ENSSBOG00000028056) #21	ENSSBOG00000032065	UBP1 (ENSSBOG00000008483) #22	FBXL2 (ENSSBOG00000030790) #23	ENSSBOG00000023948	SUSD5 (ENSSBOG00000018900) #24	CRTAP (ENSSBOG00000034685) #25	GLB1 (ENSSBOG00000027999) #26	CCR4 (ENSSBOG00000020236) #27	TRIM71 (ENSSBOG00000034396) #28	ENSSBOG00000035797	CNOT10 (ENSSBOG00000034160) #29	ENSSBOG00000019688	DYNC1LI1 (ENSSBOG00000009907) #31	ENSSBOG00000031962	CMTM6 (ENSSBOG00000023893) #32	CMTM7 (ENSSBOG00000025858) #33	U2SURP (ENSSBOG00000027984)
Marmoset	MODERN SPECIES	8	ITGA9 (ENSCJAG00000012661) #7	GOLGA4 (ENSCJAG00000012602) #9	ENSCJAG00000082213	LRRFIP2 (ENSCJAG00000012550) #10	ENSCJAG00000076469	MLH1 (ENSCJAG00000012414) #12	EPM2AIP1 (ENSCJAG00000012409) #13	TRANK1 (ENSCJAG00000012388) #15	DCLK3 (ENSCJAG00000012380) #17	STAC (ENSCJAG00000012350) #18	ARPP21 (ENSCJAG00000012301) #19	ENSCJAG00000012204 #20	ENSCJAG00000078640	CLASP2 (ENSCJAG00000012094) #21	ENSCJAG00000075183	UBP1 (ENSCJAG00000012030) #22	FBXL2 (ENSCJAG00000012006) #23	SUSD5 (ENSCJAG00000043079) #24	CRTAP (ENSCJAG00000011966) #25	GLB1 (ENSCJAG00000011922) #26	CCR4 (ENSCJAG00000022769) #27	ENSCJAG00000075987	TRIM71 (ENSCJAG00000011921) #28	ENSCJAG00000075858	ENSCJAG00000083351	CNOT10 (ENSCJAG00000011843) #29	DYNC1LI1 (ENSCJAG00000011783) #31	CMTM6 (ENSCJAG00000040951) #32	CMTM7 (ENSCJAG00000043564) #33	ENSCJAG00000078801	CMTM8 (ENSCJAG00000011776) #34
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	1061													PDCD6IP (ENSANAG00000034605)	ENSANAG00000037803	CLASP2 (ENSANAG00000028181) #21	ENSANAG00000030646 #22	FBXL2 (ENSANAG00000032054) #23	ENSANAG00000038374	SUSD5 (ENSANAG00000036819) #24	CRTAP (ENSANAG00000037231) #25	TMPPE (ENSANAG00000020099)	GLB1 (ENSANAG00000028634) #26	CCR4 (ENSANAG00000017606) #27	TRIM71 (ENSANAG00000022657) #28	CNOT10 (ENSANAG00000033966) #29	ENSANAG00000019325	DYNC1LI1 (ENSANAG00000036308) #31	ENSANAG00000029265	ENSANAG00000026200 #32	ENSANAG00000027747 #33	CMTM8 (ENSANAG00000028101) #34
Mas night monkey	MODERN SPECIES	446	ENSANAG00000035603	ENSANAG00000019547	ENSANAG00000025961	ENSANAG00000029772	NANOGNB (ENSANAG00000031517)	DPPA3 (ENSANAG00000028453)	GDF3 (ENSANAG00000023971)	APOBEC1 (ENSANAG00000027743)	ENSANAG00000019248	ENSANAG00000028978	ENSANAG00000001909	ENSANAG00000033982	ENSANAG00000030301	ENSANAG00000021598	ENSANAG00000030757	ENSANAG00000028357 #22	ENSANAG00000031265	CD163 (ENSANAG00000029818)	ENSANAG00000024833	ENSANAG00000033172	ENSANAG00000021808	ENSANAG00000029320
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	6571													PDCD6IP (ENSTSYG00000012850)	ENSTSYG00000037581	CLASP2 (ENSTSYG00000009193) #21	ENSTSYG00000000705 #22	FBXL2 (ENSTSYG00000000704) #23	SUSD5 (ENSTSYG00000009115) #24	GLB1 (ENSTSYG00000014019) #26	TRIM71 (ENSTSYG00000033433) #28
Tarsier	MODERN SPECIES	454																ENSTSYG00000034298 #22
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Lemuriformes	ANCESTRAL SPECIES	30														ENSGT01100000263710	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37	ENSGT00940000158391
Lemuriformes_a	ANCESTRAL SPECIES	123														ENSGT01100000263710	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37	ENSGT00940000158391
Greater bamboo lemur	MODERN SPECIES	267															CLASP2 (ENSPSMG00000025194) #21	UBP1 (ENSPSMG00000024910) #22	FBXL2 (ENSPSMG00000024875) #23	SUSD5 (ENSPSMG00000024866) #24	CRTAP (ENSPSMG00000024858) #25	GLB1 (ENSPSMG00000024839) #26	CCR4 (ENSPSMG00000024816) #27	TRIM71 (ENSPSMG00000024809) #28	ENSPSMG00000024804	CNOT10 (ENSPSMG00000024798) #29	DYNC1LI1 (ENSPSMG00000024748) #31	CMTM6 (ENSPSMG00000024739) #32	CMTM7 (ENSPSMG00000024733) #33	ENSPSMG00000024722 #34	ENSPSMG00000024705 #35	ENSPSMG00000024692	ENSPSMG00000024683
Coquerels sifaka	MODERN SPECIES	360														ENSPCOG00000019551	CLASP2 (ENSPCOG00000024476) #21	UBP1 (ENSPCOG00000023294) #22	FBXL2 (ENSPCOG00000024413) #23	SUSD5 (ENSPCOG00000022964) #24	CRTAP (ENSPCOG00000016454) #25	GLB1 (ENSPCOG00000022814) #26	TRIM71 (ENSPCOG00000003560) #28	CNOT10 (ENSPCOG00000020249) #29	DYNC1LI1 (ENSPCOG00000000282) #31	CMTM6 (ENSPCOG00000017431) #32	CMTM7 (ENSPCOG00000015871) #33	CMTM8 (ENSPCOG00000020806) #34	GPD1L (ENSPCOG00000006898) #35	OSBPL10 (ENSPCOG00000013881) #36	STT3B (ENSPCOG00000018661) #37
Bushbaby	MODERN SPECIES	117	CTDSPL (ENSOGAG00000004624)	ENSOGAG00000034113	ITGA9 (ENSOGAG00000004436) #7	GOLGA4 (ENSOGAG00000027706) #9	ENSOGAG00000029650	LRRFIP2 (ENSOGAG00000008423) #10	MLH1 (ENSOGAG00000008416) #12	EPM2AIP1 (ENSOGAG00000032395) #13	TRANK1 (ENSOGAG00000026991) #15	DCLK3 (ENSOGAG00000028781) #17	STAC (ENSOGAG00000007133) #18	ARPP21 (ENSOGAG00000009701) #19	PDCD6IP (ENSOGAG00000006048)	CLASP2 (ENSOGAG00000006037) #21	ENSOGAG00000006046	UBP1 (ENSOGAG00000000962) #22	FBXL2 (ENSOGAG00000000961) #23	SUSD5 (ENSOGAG00000008438) #24	CRTAP (ENSOGAG00000024678) #25	TMPPE (ENSOGAG00000008436)	GLB1 (ENSOGAG00000008431) #26	CCR4 (ENSOGAG00000008430) #27	TRIM71 (ENSOGAG00000015458) #28	CNOT10 (ENSOGAG00000007295) #29	DYNC1LI1 (ENSOGAG00000016162) #31	ENSOGAG00000026982 #32	ENSOGAG00000028641	CMTM7 (ENSOGAG00000005726) #33	CMTM8 (ENSOGAG00000013250) #34	ENSOGAG00000025400	GPD1L (ENSOGAG00000013243) #35
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264025	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Glires	ANCESTRAL SPECIES	2	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264025	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264025	ENSGT00940000177252	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Rodentia_A	ANCESTRAL SPECIES	29	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264025	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Hystricomorpha	ANCESTRAL SPECIES	34	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264025	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880.d #36	ENSGT00940000155488 #37
Hystricomorpha_a	ANCESTRAL SPECIES	45	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264025	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29
Hystricomorpha_b	ANCESTRAL SPECIES	42	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264025	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29
Long-tailed chinchilla	MODERN SPECIES	128	CTDSPL (ENSCLAG00000004547)	ITGA9 (ENSCLAG00000004058) #7	GOLGA4 (ENSCLAG00000005913) #9	LRRFIP2 (ENSCLAG00000003180) #10	MLH1 (ENSCLAG00000004334) #12	EPM2AIP1 (ENSCLAG00000017557) #13	ENSCLAG00000004029	TRANK1 (ENSCLAG00000003643) #15	DCLK3 (ENSCLAG00000005385) #17	STAC (ENSCLAG00000005121) #18	ARPP21 (ENSCLAG00000007764) #19	ENSCLAG00000006281	ENSCLAG00000004325	ENSCLAG00000004047	CLASP2 (ENSCLAG00000008638) #21	UBP1 (ENSCLAG00000006836) #22	ENSCLAG00000008435	FBXL2 (ENSCLAG00000007695) #23	SUSD5 (ENSCLAG00000011153) #24	CRTAP (ENSCLAG00000010951) #25	TMPPE (ENSCLAG00000010807)	GLB1 (ENSCLAG00000005577) #26	CCR4 (ENSCLAG00000004615) #27	TRIM71 (ENSCLAG00000004257) #28	CNOT10 (ENSCLAG00000005847) #29
Degu	MODERN SPECIES	112	GOLGA4 (ENSODEG00000005969) #9	ENSODEG00000019234	ENSODEG00000006044 #10	MLH1 (ENSODEG00000006098) #12	EPM2AIP1 (ENSODEG00000019311) #13	TRANK1 (ENSODEG00000003882) #15	ENSODEG00000003967	DCLK3 (ENSODEG00000003986) #17	STAC (ENSODEG00000004015) #18	ENSODEG00000004051	ENSODEG00000004084	ARPP21 (ENSODEG00000004233) #19	ENSODEG00000004411	ENSODEG00000004442	CLASP2 (ENSODEG00000004563) #21	UBP1 (ENSODEG00000004843) #22	ENSODEG00000004881 #23	ENSODEG00000004897	SUSD5 (ENSODEG00000004909) #24	CRTAP (ENSODEG00000004936) #25	ENSODEG00000004950	GLB1 (ENSODEG00000004977) #26	CCR4 (ENSODEG00000019140) #27	TRIM71 (ENSODEG00000005007) #28	ENSODEG00000003781 #29	ENSODEG00000003905	ENSODEG00000018979	ENSODEG00000018981	NET1 (ENSODEG00000003988)	CALML3 (ENSODEG00000019023)	ASB13 (ENSODEG00000004057)
Guinea pig	MODERN SPECIES	16	PLCD1 (ENSCPOG00000000596)	VILL (ENSCPOG00000029985)	CTDSPL (ENSCPOG00000000592)	ITGA9 (ENSCPOG00000014650) #7	GOLGA4 (ENSCPOG00000008525) #9	LRRFIP2 (ENSCPOG00000038703) #10	MLH1 (ENSCPOG00000003928) #12	EPM2AIP1 (ENSCPOG00000022371) #13	TRANK1 (ENSCPOG00000013754) #15	DCLK3 (ENSCPOG00000002280) #17	STAC (ENSCPOG00000031088) #18	ARPP21 (ENSCPOG00000008780) #19	ENSCPOG00000003230	CLASP2 (ENSCPOG00000015184) #21	ENSCPOG00000037431	UBP1 (ENSCPOG00000009270) #22	FBXL2 (ENSCPOG00000013854) #23	SUSD5 (ENSCPOG00000009325) #24	CRTAP (ENSCPOG00000035810) #25	GLB1 (ENSCPOG00000004491) #26	TMPPE (ENSCPOG00000025403)	Ccr4 (ENSCPOG00000035503) #27	TRIM71 (ENSCPOG00000004496) #28	CNOT10 (ENSCPOG00000005938) #29
Naked mole-rat female	MODERN SPECIES	28	TRANK1 (ENSHGLG00000002458) #15	DCLK3 (ENSHGLG00000002384) #17	ENSHGLG00000039711	STAC (ENSHGLG00000001907) #18	ENSHGLG00000001835	ARPP21 (ENSHGLG00000001335) #19	ENSHGLG00000050645	ENSHGLG00000036492	ENSHGLG00000050797	ENSHGLG00000035031	ENSHGLG00000033661	ENSHGLG00000040644	ENSHGLG00000001187	PDCD6IP (ENSHGLG00000004033)	ENSHGLG00000003013 #21	UBP1 (ENSHGLG00000002333) #22	FBXL2 (ENSHGLG00000002144) #23	ENSHGLG00000002747	ENSHGLG00000037082 #23	SUSD5 (ENSHGLG00000040528) #24	CRTAP (ENSHGLG00000002614) #25	ENSHGLG00000037229	ENSHGLG00000002496	GLB1 (ENSHGLG00000002150) #26	ENSHGLG00000002090 #27	ENSHGLG00000001826 #28	ENSHGLG00000047516	ENSHGLG00000039776	ENSHGLG00000019891	ENSHGLG00000001731 #29	ENSHGLG00000001574 #31
Sciuridae	ANCESTRAL SPECIES	37	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263710	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b.f #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	156	ENSSVLG00005024287	APOOL (ENSSVLG00005024251)	ENSSVLG00005024204	ENSSVLG00005024140	ZNF711 (ENSSVLG00005024106)	POF1B (ENSSVLG00005023983)	ENSSVLG00005023891	DACH2 (ENSSVLG00005023583)	KLHL4 (ENSSVLG00005023401)	ENSSVLG00005023341	ENSSVLG00005023323	ENSSVLG00005023291	CPXCR1 (ENSSVLG00005023282)	ENSSVLG00005023265	ENSSVLG00005023244	ENSSVLG00005023178 #22	ENSSVLG00005023139	ENSSVLG00005023114	ENSSVLG00005023085	PABPC5 (ENSSVLG00005023058)	ENSSVLG00005022794	ENSSVLG00005022703	NAP1L3 (ENSSVLG00005022672)	FAM133A (ENSSVLG00005022654)	ENSSVLG00005022641	ENSSVLG00005022502	ENSSVLG00005022483	ENSSVLG00005022450	ENSSVLG00005022409	ENSSVLG00005022389	DIAPH2 (ENSSVLG00005021445)
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005003804	ENSSVLG00005003792	ALOX5 (ENSSVLG00005003729)	ENSSVLG00005003702	ENSSVLG00005003684	ENSSVLG00005003664	ENSSVLG00005003648	ENSSVLG00005003631	ENSSVLG00005003579	ENSSVLG00005003534	ENSSVLG00005003522	ENSSVLG00005003511	ENSSVLG00005003498	ENSSVLG00005003469	ENSSVLG00005003459	ENSSVLG00005003435 #22	ENSSVLG00005003421	ENSSVLG00005003415	ENSSVLG00005003408	ENSSVLG00005003375	ENSSVLG00005003360	ENSSVLG00005003349	ENSSVLG00005003335	ENSSVLG00005003322	ENSSVLG00005003224	ENSSVLG00005003212	RBP3 (ENSSVLG00005003192)	GDF2 (ENSSVLG00005003178)	GDF10 (ENSSVLG00005003156)	PTPN20 (ENSSVLG00005003065)	ENSSVLG00005003026
Eurasian red squirrel	MODERN SPECIES	18	QRFPR (ENSSVLG00005014858)	NDNF (ENSSVLG00005014362)	PRDM5 (ENSSVLG00005014293)	MAD2L1 (ENSSVLG00005014204)	ENSSVLG00005014083	PDE5A (ENSSVLG00005013841)	FABP2 (ENSSVLG00005013640)	USP53 (ENSSVLG00005013592)	MYOZ2 (ENSSVLG00005013483)	ENSSVLG00005013417	SEC24D (ENSSVLG00005013288)	METTL14 (ENSSVLG00005013085)	PRSS12 (ENSSVLG00005012955)	ENSSVLG00005012895	ENSSVLG00005012798	ENSSVLG00005012769 #22
Eurasian red squirrel	MODERN SPECIES	7	CTDSPL (ENSSVLG00005025247)	ITGA9 (ENSSVLG00005012250) #7	GOLGA4 (ENSSVLG00005012688) #9	LRRFIP2 (ENSSVLG00005013687) #10	MLH1 (ENSSVLG00005013997) #12	EPM2AIP1 (ENSSVLG00005014305) #13	DCLK3 (ENSSVLG00005014534) #17	STAC (ENSSVLG00005014652) #18	ENSSVLG00005014908	ARPP21 (ENSSVLG00005015042) #19	ENSSVLG00005015643	ENSSVLG00005015672	ENSSVLG00005015730	ENSSVLG00005015747	CLASP2 (ENSSVLG00005015931) #21	ENSSVLG00005016631 #22	FBXL2 (ENSSVLG00005016938) #23	ENSSVLG00005016987	SUSD5 (ENSSVLG00005017013) #24	CRTAP (ENSSVLG00005017097) #25	GLB1 (ENSSVLG00005017191) #26	CCR4 (ENSSVLG00005017231) #27	ENSSVLG00005017257	TRIM71 (ENSSVLG00005017310) #28	ENSSVLG00005017367	CNOT10 (ENSSVLG00005017438) #29	ENSSVLG00005017813 #31	ENSSVLG00005017871	CMTM6 (ENSSVLG00005017911) #32	CMTM7 (ENSSVLG00005017933) #33	CMTM8 (ENSSVLG00005018015) #34
Marmotini	ANCESTRAL SPECIES	12	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263710	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00940000154661.b.cb.a	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b.e #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	24	ENSMMMG00000011335	ENSMMMG00000011345 #8	GOLGA4 (ENSMMMG00000011361) #9	LRRFIP2 (ENSMMMG00000011434) #10	MLH1 (ENSMMMG00000011531) #12	EPM2AIP1 (ENSMMMG00000011565) #13	ENSMMMG00000011569	TRANK1 (ENSMMMG00000011577) #15	DCLK3 (ENSMMMG00000011687) #17	STAC (ENSMMMG00000011699) #18	ARPP21 (ENSMMMG00000011719) #19	ENSMMMG00000012340	ENSMMMG00000012359	ENSMMMG00000012382	CLASP2 (ENSMMMG00000012399) #21	ENSMMMG00000012782 #22	FBXL2 (ENSMMMG00000012899) #23	ENSMMMG00000012921	SUSD5 (ENSMMMG00000012926) #24	CRTAP (ENSMMMG00000012952) #25	TMPPE (ENSMMMG00000012974)	GLB1 (ENSMMMG00000013001) #26	CCR4 (ENSMMMG00000013862) #27	TRIM71 (ENSMMMG00000013868) #28	CNOT10 (ENSMMMG00000013884) #29	DYNC1LI1 (ENSMMMG00000013909) #31	CMTM7 (ENSMMMG00000013916) #33	CMTM8 (ENSMMMG00000013921) #34	ENSMMMG00000013931 #35	OSBPL10 (ENSMMMG00000013949) #36	STT3B (ENSMMMG00000013968) #37
Alpin marmot	MODERN SPECIES	7	CCNB2 (ENSMMMG00000011506)	MYO1E (ENSMMMG00000011477)	ENSMMMG00000011444	FAM81A (ENSMMMG00000011428)	GCNT3 (ENSMMMG00000011425)	GTF2A2 (ENSMMMG00000011388)	BNIP2 (ENSMMMG00000011312)	FOXB1 (ENSMMMG00000011291)	ENSMMMG00000011269	ENSMMMG00000011237	ENSMMMG00000011212	RORA (ENSMMMG00000011194)	VPS13C (ENSMMMG00000011042)	ENSMMMG00000011035	ENSMMMG00000011024	ENSMMMG00000011016 #22	TLN2 (ENSMMMG00000010746)	TPM1 (ENSMMMG00000009577)	RPS27L (ENSMMMG00000009532)	RAB8B (ENSMMMG00000009506)	APH1B (ENSMMMG00000009477)	CA12 (ENSMMMG00000009446)	USP3 (ENSMMMG00000009199)	ENSMMMG00000009191	ENSMMMG00000009185	HERC1 (ENSMMMG00000009068)	DAPK2 (ENSMMMG00000009028)	CIAO2A (ENSMMMG00000009021)	SNX1 (ENSMMMG00000009009)	SNX22 (ENSMMMG00000008995)	PPIB (ENSMMMG00000008986)
Marmotini_b	ANCESTRAL SPECIES	24	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263710	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00940000154661.b.cb.a	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b.f #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Squirrel	MODERN SPECIES	73	ENSSTOG00000001524	CTDSPL (ENSSTOG00000001517)	ENSSTOG00000029563	ITGA9 (ENSSTOG00000009402) #7	GOLGA4 (ENSSTOG00000019749) #9	LRRFIP2 (ENSSTOG00000023775) #10	MLH1 (ENSSTOG00000005413) #12	EPM2AIP1 (ENSSTOG00000028877) #13	ENSSTOG00000033099	TRANK1 (ENSSTOG00000027352) #15	DCLK3 (ENSSTOG00000028839) #17	STAC (ENSSTOG00000005934) #18	ARPP21 (ENSSTOG00000008350) #19	ENSSTOG00000003420	CLASP2 (ENSSTOG00000002360) #21	UBP1 (ENSSTOG00000012083) #22	FBXL2 (ENSSTOG00000012071) #23	ENSSTOG00000024871	SUSD5 (ENSSTOG00000020774) #24	CRTAP (ENSSTOG00000022421) #25	GLB1 (ENSSTOG00000010026) #26	TRIM71 (ENSSTOG00000015191) #28	CNOT10 (ENSSTOG00000015174) #29	DYNC1LI1 (ENSSTOG00000012613) #31	CMTM6 (ENSSTOG00000012605) #32	CMTM7 (ENSSTOG00000012595) #33	CMTM8 (ENSSTOG00000013600) #34	GPD1L (ENSSTOG00000032260) #35	OSBPL10 (ENSSTOG00000013624) #36	STT3B (ENSSTOG00000013598) #37	GADL1 (ENSSTOG00000014390)
Arctic ground squirrel	MODERN SPECIES	11	VILL (ENSUPAG00010006192)	CTDSPL (ENSUPAG00010006173)	ITGA9 (ENSUPAG00010006117) #7	GOLGA4 (ENSUPAG00010005954) #9	LRRFIP2 (ENSUPAG00010005307) #10	MLH1 (ENSUPAG00010005272) #12	EPM2AIP1 (ENSUPAG00010005264) #13	ENSUPAG00010005263	ENSUPAG00010005258	TRANK1 (ENSUPAG00010005066) #15	DCLK3 (ENSUPAG00010005058) #17	STAC (ENSUPAG00010005051) #18	ARPP21 (ENSUPAG00010004968) #19	ENSUPAG00010004908	CLASP2 (ENSUPAG00010002896) #21	UBP1 (ENSUPAG00010002830) #22	FBXL2 (ENSUPAG00010002805) #23	SUSD5 (ENSUPAG00010002801) #24	CRTAP (ENSUPAG00010002794) #25	GLB1 (ENSUPAG00010002756) #26	CCR4 (ENSUPAG00010002745) #27	TRIM71 (ENSUPAG00010002736) #28	CNOT10 (ENSUPAG00010002658) #29	DYNC1LI1 (ENSUPAG00010002650) #31	CMTM6 (ENSUPAG00010002641) #32	CMTM7 (ENSUPAG00010002624) #33	CMTM8 (ENSUPAG00010002616) #34	ENSUPAG00010002613 #35	OSBPL10 (ENSUPAG00010002573) #36	STT3B (ENSUPAG00010002543) #37	GADL1 (ENSUPAG00010002514)
Rodentia_B	ANCESTRAL SPECIES	50							ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000177252	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Myomorpha	ANCESTRAL SPECIES	26	ENSGT00940000159076	ENSGT00940000154960	ENSGT00940000162454	ENSGT00960000189448	ENSGT00940000156055	ENSGT00960000187586	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000177252	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Muroidea	ANCESTRAL SPECIES	27	ENSGT00940000154960	ENSGT00940000162454	ENSGT00960000189448	ENSGT00940000156055	ENSGT01020000230359.C.a.a.b ##27	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263856	ENSGT00940000177252	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00940000159076	ENSGT00940000154960	ENSGT00940000162454	ENSGT00960000189448	ENSGT00940000156055	ENSGT01020000230359.C.a.a.b ##27	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263856	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.r #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00530000069333.b	ENSGT00940000159076	ENSGT00940000154960	ENSGT00940000162454	ENSGT00940000156055	ENSGT01020000230359.C.a.a.b ##27	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263856	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.r #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Cricetidae_B	ANCESTRAL SPECIES	23	ENSGT00940000159076	ENSGT00940000154960	ENSGT00940000162454	ENSGT00940000156055	ENSGT01020000230359.C.a.a.b ##27	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263856	ENSGT00940000177252	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.r #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Northern American deer mouse	MODERN SPECIES	20	Lrrc2 (ENSPEMG00000000290)	ENSPEMG00000015192	Ltf (ENSPEMG00000021984)	Ccrl2 (ENSPEMG00000022959) ##27	Lrrfip2 (ENSPEMG00000023258) #10	Mlh1 (ENSPEMG00000009556) #12	Epm2aip1 (ENSPEMG00000015118) #13	Trank1 (ENSPEMG00000006814) #15	Dclk3 (ENSPEMG00000020900) #17	Stac (ENSPEMG00000012752) #18	Arpp21 (ENSPEMG00000009709) #19	Pdcd6ip (ENSPEMG00000019792)	ENSPEMG00000019448	ENSPEMG00000027844	Clasp2 (ENSPEMG00000020217) #21	Ubp1 (ENSPEMG00000019557) #22	Fbxl2 (ENSPEMG00000010411) #23	Susd5 (ENSPEMG00000017129) #24	Crtap (ENSPEMG00000019653) #25	Tmppe (ENSPEMG00000019814)	Glb1 (ENSPEMG00000019879) #26	Ccr4 (ENSPEMG00000019665) #27	Trim71 (ENSPEMG00000012573) #28	Cnot10 (ENSPEMG00000019896) #29	Dync1li1 (ENSPEMG00000019887) #31	Cmtm6 (ENSPEMG00000025692) #32	Cmtm7 (ENSPEMG00000019836) #33	Cmtm8 (ENSPEMG00000019608) #34	ENSPEMG00000030099	ENSPEMG00000028076 #35	Osbpl10 (ENSPEMG00000019755) #36
Prairie vole	MODERN SPECIES	13	Als2cl (ENSMOCG00000005468)	Fam240a (ENSMOCG00000020891)	ENSMOCG00000012926	Lrrc2 (ENSMOCG00000014750)	ENSMOCG00000004293	Ltf (ENSMOCG00000012504)	Lrrfip2 (ENSMOCG00000015703) #10	Mlh1 (ENSMOCG00000019848) #12	Epm2aip1 (ENSMOCG00000010160) #13	Trank1 (ENSMOCG00000021711) #15	Dclk3 (ENSMOCG00000022542) #17	Stac (ENSMOCG00000016264) #18	ENSMOCG00000004472 #19	Pdcd6ip (ENSMOCG00000022660)	Clasp2 (ENSMOCG00000018288) #21	Ubp1 (ENSMOCG00000021363) #22	Fbxl2 (ENSMOCG00000014205) #23	Susd5 (ENSMOCG00000016903) #24	ENSMOCG00000019655 #25	Glb1 (ENSMOCG00000019733) #26	Ccr4 (ENSMOCG00000016957) #27	Trim71 (ENSMOCG00000018592) #28	Cnot10 (ENSMOCG00000018672) #29	Dync1li1 (ENSMOCG00000020559) #31	Cmtm6 (ENSMOCG00000001815) #32	ENSMOCG00000008730 #33	Cmtm8 (ENSMOCG00000010377) #34	ENSMOCG00000012300 #35	Osbpl10 (ENSMOCG00000019718) #36	Stt3b (ENSMOCG00000021697) #37	Gadl1 (ENSMOCG00000005000)
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00940000161305	ENSGT00940000159076	ENSGT00940000154960	ENSGT00940000162454	ENSGT00940000156055	ENSGT01020000230359.C.a.a.b ##27	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263856	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT00390000010260	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.r #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Golden Hamster	MODERN SPECIES	667	Als2cl (ENSMAUG00000022053)	ENSMAUG00000011746	ENSMAUG00000012380	ENSMAUG00000005955	Ltf (ENSMAUG00000007952)	Ccrl2 (ENSMAUG00000005636) ##27	Lrrfip2 (ENSMAUG00000014279) #10	Mlh1 (ENSMAUG00000015550) #12	Epm2aip1 (ENSMAUG00000010307) #13	Trank1 (ENSMAUG00000004490) #15	Dclk3 (ENSMAUG00000009394) #17	Stac (ENSMAUG00000011037) #18	Arpp21 (ENSMAUG00000021700) #19	Pdcd6ip (ENSMAUG00000016616)	Clasp2 (ENSMAUG00000018050) #21	Ubp1 (ENSMAUG00000009072) #22	Fbxl2 (ENSMAUG00000006749) #23	Susd5 (ENSMAUG00000012731) #24	Crtap (ENSMAUG00000017404) #25	Glb1 (ENSMAUG00000017765) #26	Tmppe (ENSMAUG00000008240)	Ccr4 (ENSMAUG00000010501) #27	Trim71 (ENSMAUG00000012924) #28	Cnot10 (ENSMAUG00000015396) #29	Dync1li1 (ENSMAUG00000016283) #31	Cmtm6 (ENSMAUG00000012707) #32	Cmtm7 (ENSMAUG00000021569) #33	Cmtm8 (ENSMAUG00000015415) #34	Gpd1l (ENSMAUG00000020651) #35	Osbpl10 (ENSMAUG00000012681) #36	Stt3b (ENSMAUG00000011786) #37
Chinese hamster chok1gshd	MODERN SPECIES	284	Als2cl (ENSCGRG00001017326)	Tdgf1 (ENSCGRG00001010294)	Lrrc2 (ENSCGRG00001000643)	ENSCGRG00001014656	Ltf (ENSCGRG00001023833)	Ccrl2 (ENSCGRG00001011599) ##27	Lrrfip2 (ENSCGRG00001011695) #10	Mlh1 (ENSCGRG00001022452) #12	Epm2aip1 (ENSCGRG00001004981) #13	Trank1 (ENSCGRG00001009923) #15	Dclk3 (ENSCGRG00001023842) #17	Stac (ENSCGRG00001016769) #18	Arpp21 (ENSCGRG00001012175) #19	Pdcd6ip (ENSCGRG00001013319)	Clasp2 (ENSCGRG00001014776) #21	Ubp1 (ENSCGRG00001015379) #22	Fbxl2 (ENSCGRG00001020190) #23	Susd5 (ENSCGRG00001014192) #24	Crtap (ENSCGRG00001010658) #25	Glb1 (ENSCGRG00001017634) #26	Ccr4 (ENSCGRG00001008115) #27	Trim71 (ENSCGRG00001025008) #28	Cnot10 (ENSCGRG00001023474) #29	Dync1li1 (ENSCGRG00001019361) #31	Cmtm6 (ENSCGRG00001017495) #32	Cmtm7 (ENSCGRG00001017140) #33	Cmtm8 (ENSCGRG00001021252) #34	Gpd1l (ENSCGRG00001016133) #35	Osbpl10 (ENSCGRG00001006361) #36	Stt3b (ENSCGRG00001022574) #37	Gadl1 (ENSCGRG00001015920)
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000159076	ENSGT00940000154960	ENSGT00940000162454	ENSGT00960000189448	ENSGT00940000156055	ENSGT01020000230359.C.a.a.b ##27	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263856	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.r #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Mus	ANCESTRAL SPECIES	4	ENSGT00940000159076	ENSGT00940000154960	ENSGT00940000162454	ENSGT00960000189448	ENSGT00940000156055	ENSGT01020000230359.C.a.a.b ##27	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263856	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT00390000010260	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.r #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000159076	ENSGT00940000154960	ENSGT00940000162454	ENSGT00960000189448	ENSGT00940000156055	ENSGT01020000230359.C.a.a.b ##27	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263856	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT00390000010260	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.r #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000159076	ENSGT00940000154960	ENSGT00940000162454	ENSGT00960000189448	ENSGT00940000156055	ENSGT01020000230359.C.a.a.b ##27	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263856	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT00390000010260	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.r #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Mus_C	ANCESTRAL SPECIES	23	ENSGT00940000159076	ENSGT00940000154960	ENSGT00940000162454	ENSGT00960000189448	ENSGT00940000156055	ENSGT01020000230359.C.a.a.b ##27	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263856	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT00390000010260	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.r #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
spretus	MODERN SPECIES	18	Fam240a (MGP_SPRETEiJ_G0033896)	Tdgf1 (MGP_SPRETEiJ_G0033897)	Lrrc2 (MGP_SPRETEiJ_G0033898)	MGP_SPRETEiJ_G0033899	Ltf (MGP_SPRETEiJ_G0033900)	Ccrl2 (MGP_SPRETEiJ_G0033901) ##27	MGP_SPRETEiJ_G0033902 #10	Mlh1 (MGP_SPRETEiJ_G0033903) #12	Epm2aip1 (MGP_SPRETEiJ_G0033904) #13	Trank1 (MGP_SPRETEiJ_G0033905) #15	Dclk3 (MGP_SPRETEiJ_G0033906) #17	Stac (MGP_SPRETEiJ_G0033907) #18	Arpp21 (MGP_SPRETEiJ_G0033908) #19	Pdcd6ip (MGP_SPRETEiJ_G0033909)	Clasp2 (MGP_SPRETEiJ_G0033910) #21	Ubp1 (MGP_SPRETEiJ_G0033911) #22	Fbxl2 (MGP_SPRETEiJ_G0033912) #23	Susd5 (MGP_SPRETEiJ_G0033913) #24	Crtap (MGP_SPRETEiJ_G0033914) #25	Glb1 (MGP_SPRETEiJ_G0033915) #26	Tmppe (MGP_SPRETEiJ_G0033916)	Ccr4 (MGP_SPRETEiJ_G0033917) #27	Trim71 (MGP_SPRETEiJ_G0033918) #28	MGP_SPRETEiJ_G0033919	Cnot10 (MGP_SPRETEiJ_G0033920) #29	Dync1li1 (MGP_SPRETEiJ_G0033921) #31	Cmtm6 (MGP_SPRETEiJ_G0033922) #32	Cmtm7 (MGP_SPRETEiJ_G0033923) #33	Cmtm8 (MGP_SPRETEiJ_G0033924) #34	Gpd1l (MGP_SPRETEiJ_G0033925) #35	Osbpl10 (MGP_SPRETEiJ_G0033926) #36
Steppe mouse	MODERN SPECIES	3088													Arpp21 (ENSMSIG00000028251) #19	Pdcd6ip (ENSMSIG00000028422)	Clasp2 (ENSMSIG00000028452) #21	Ubp1 (ENSMSIG00000028689) #22	Fbxl2 (ENSMSIG00000028716) #23	Susd5 (ENSMSIG00000028735) #24
Mouse	MODERN SPECIES	18	Fam240a (ENSMUSG00000096393)	Tdgf1 (ENSMUSG00000032494)	Lrrc2 (ENSMUSG00000032495)	Rtp3 (ENSMUSG00000066319)	Ltf (ENSMUSG00000032496)	Ccrl2 (ENSMUSG00000043953) ##27	Lrrfip2 (ENSMUSG00000032497) #10	Mlh1 (ENSMUSG00000032498) #12	Epm2aip1 (ENSMUSG00000046785) #13	Trank1 (ENSMUSG00000062296) #15	Dclk3 (ENSMUSG00000032500) #17	Stac (ENSMUSG00000032502) #18	Arpp21 (ENSMUSG00000032503) #19	Pdcd6ip (ENSMUSG00000032504)	Clasp2 (ENSMUSG00000033392) #21	Ubp1 (ENSMUSG00000009741) #22	Fbxl2 (ENSMUSG00000032507) #23	Susd5 (ENSMUSG00000086596) #24	Bcl2a1c (ENSMUSG00000053820)	Crtap (ENSMUSG00000032431) #25	Glb1 (ENSMUSG00000045594) #26	Tmppe (ENSMUSG00000079260)	Ccr4 (ENSMUSG00000047898) #27	Trim71 (ENSMUSG00000079259) #28	Cnot10 (ENSMUSG00000056167) #29	Dync1li1 (ENSMUSG00000032435) #31	Cmtm6 (ENSMUSG00000032434) #32	Cmtm7 (ENSMUSG00000032436) #33	Cmtm8 (ENSMUSG00000041012) #34	Gpd1l (ENSMUSG00000050627) #35	Osbpl10 (ENSMUSG00000040875) #36
Ryukyu mouse	MODERN SPECIES	18	MGP_CAROLIEiJ_G0032749	Lrrc2 (MGP_CAROLIEiJ_G0032750)	MGP_CAROLIEiJ_G0032751	Ltf (MGP_CAROLIEiJ_G0032752)	Ccrl2 (MGP_CAROLIEiJ_G0032753) ##27	Lrrfip2 (MGP_CAROLIEiJ_G0032754) #10	Mlh1 (MGP_CAROLIEiJ_G0032755) #12	Epm2aip1 (MGP_CAROLIEiJ_G0032756) #13	Trank1 (MGP_CAROLIEiJ_G0032757) #15	Dclk3 (MGP_CAROLIEiJ_G0032758) #17	Stac (MGP_CAROLIEiJ_G0032759) #18	Arpp21 (MGP_CAROLIEiJ_G0032760) #19	Pdcd6ip (MGP_CAROLIEiJ_G0032762)	MGP_CAROLIEiJ_G0032763 #21	Clasp2 (MGP_CAROLIEiJ_G0032764) #21	Ubp1 (MGP_CAROLIEiJ_G0032765) #22	MGP_CAROLIEiJ_G0032766	Susd5 (MGP_CAROLIEiJ_G0032767) #24	Glb1 (MGP_CAROLIEiJ_G0032768) #26	Tmppe (MGP_CAROLIEiJ_G0032769)	Ccr4 (MGP_CAROLIEiJ_G0032770) #27	Trim71 (MGP_CAROLIEiJ_G0032771) #28	MGP_CAROLIEiJ_G0032772	Cnot10 (MGP_CAROLIEiJ_G0032773) #29	Dync1li1 (MGP_CAROLIEiJ_G0032774) #31	Cmtm6 (MGP_CAROLIEiJ_G0032775) #32	Cmtm7 (MGP_CAROLIEiJ_G0032776) #33	Cmtm8 (MGP_CAROLIEiJ_G0032777) #34	Gpd1l (MGP_CAROLIEiJ_G0032778) #35	Osbpl10 (MGP_CAROLIEiJ_G0032779) #36	Stt3b (MGP_CAROLIEiJ_G0032780) #37
Shrew mouse	MODERN SPECIES	1	MGP_PahariEiJ_G0015616	Lrrc2 (MGP_PahariEiJ_G0015617)	MGP_PahariEiJ_G0015618	Ltf (MGP_PahariEiJ_G0015619)	Ccrl2 (MGP_PahariEiJ_G0015620) ##27	MGP_PahariEiJ_G0015621 #10	Mlh1 (MGP_PahariEiJ_G0015622) #12	Epm2aip1 (MGP_PahariEiJ_G0015623) #13	Trank1 (MGP_PahariEiJ_G0015624) #15	Dclk3 (MGP_PahariEiJ_G0015625) #17	Stac (MGP_PahariEiJ_G0015626) #18	Arpp21 (MGP_PahariEiJ_G0015627) #19	Pdcd6ip (MGP_PahariEiJ_G0015628)	MGP_PahariEiJ_G0015629 #21	Clasp2 (MGP_PahariEiJ_G0015630) #21	Ubp1 (MGP_PahariEiJ_G0015631) #22	MGP_PahariEiJ_G0015632	Susd5 (MGP_PahariEiJ_G0015633) #24	Crtap (MGP_PahariEiJ_G0015634) #25	Glb1 (MGP_PahariEiJ_G0015635) #26	Tmppe (MGP_PahariEiJ_G0015636)	Ccr4 (MGP_PahariEiJ_G0015637) #27	Trim71 (MGP_PahariEiJ_G0015638) #28	MGP_PahariEiJ_G0015639	Cnot10 (MGP_PahariEiJ_G0015640) #29	Dync1li1 (MGP_PahariEiJ_G0015641) #31	Cmtm6 (MGP_PahariEiJ_G0015642) #32	Cmtm7 (MGP_PahariEiJ_G0015643) #33	Cmtm8 (MGP_PahariEiJ_G0015644) #34	Gpd1l (MGP_PahariEiJ_G0015645) #35	Osbpl10 (MGP_PahariEiJ_G0015646) #36
Rat	MODERN SPECIES	18	Lrrc2 (ENSRNOG00000030688)	Rtp3 (ENSRNOG00000037167)	AC132539.3 (ENSRNOG00000052063)	RGD1565653 (ENSRNOG00000062517)	Ltf (ENSRNOG00000031779)	Ccrl2 (ENSRNOG00000033234) ##27	Lrrfip2 (ENSRNOG00000021047) #10	Mlh1 (ENSRNOG00000033809) #12	Epm2aip1 (ENSRNOG00000043006) #13	Trank1 (ENSRNOG00000021091) #15	Dclk3 (ENSRNOG00000033026) #17	Stac (ENSRNOG00000008865) #18	Arpp21 (ENSRNOG00000008919) #19	Pdcd6ip (ENSRNOG00000008981)	Clasp2 (ENSRNOG00000009161) #21	Ubp1 (ENSRNOG00000009729) #22	Fbxl2 (ENSRNOG00000027099) #23	ENSRNOG00000070154	Susd5 (ENSRNOG00000026951) #24	Crtap (ENSRNOG00000009878) #25	Tmppe (ENSRNOG00000066638)	Glb1 (ENSRNOG00000010196) #26	Ccr4 (ENSRNOG00000010315) #27	Trim71 (ENSRNOG00000030098) #28	Cnot10 (ENSRNOG00000052305) #29	Dync1li1 (ENSRNOG00000010434) #31	Cmtm6 (ENSRNOG00000010951) #32	Cmtm7 (ENSRNOG00000067317) #33	Cmtm8 (ENSRNOG00000011201) #34	Gpd1l (ENSRNOG00000026455) #35	Osbpl10 (ENSRNOG00000011435) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	848														Pdcd6ip (ENSNGAG00000016325)	Clasp2 (ENSNGAG00000007415) #21	Ubp1 (ENSNGAG00000014497) #22	ENSNGAG00000007776	Fbxl2 (ENSNGAG00000009887) #23	Susd5 (ENSNGAG00000012507) #24	Crtap (ENSNGAG00000016860) #25	Glb1 (ENSNGAG00000003047) #26	ENSNGAG00000016708 #27	Trim71 (ENSNGAG00000012009) #28	ENSNGAG00000012298
Lesser Egyptian jerboa	MODERN SPECIES	88	Prss45 (ENSJJAG00000019524)	Prss46 (ENSJJAG00000021613)	Als2cl (ENSJJAG00000017612)	ENSJJAG00000023493	Lrrc2 (ENSJJAG00000012595)	ENSJJAG00000014774	ENSJJAG00000015022	Lrrfip2 (ENSJJAG00000014566) #10	Mlh1 (ENSJJAG00000021943) #12	Epm2aip1 (ENSJJAG00000001100) #13	Trank1 (ENSJJAG00000011092) #15	Dclk3 (ENSJJAG00000021037) #17	Stac (ENSJJAG00000016973) #18	Arpp21 (ENSJJAG00000018847) #19	Clasp2 (ENSJJAG00000024139) #21	Ubp1 (ENSJJAG00000022432) #22	Susd5 (ENSJJAG00000000932) #24	Crtap (ENSJJAG00000011891) #25	ENSJJAG00000019480 #26	Ccr4 (ENSJJAG00000004992) #27	Trim71 (ENSJJAG00000021157) #28	Cnot10 (ENSJJAG00000006665) #29	ENSJJAG00000012341 #31	Cmtm6 (ENSJJAG00000000180) #32	Cmtm7 (ENSJJAG00000007568) #33	ENSJJAG00000013711	Cmtm8 (ENSJJAG00000024299) #34	Gpd1l (ENSJJAG00000010383) #35	Osbpl10 (ENSJJAG00000018740) #36	Stt3b (ENSJJAG00000012543) #37	Gadl1 (ENSJJAG00000023705)
Kangaroo rat	MODERN SPECIES	429													ENSDORG00000013384 #20	ENSDORG00000025886	Clasp2 (ENSDORG00000002383) #21	Ubp1 (ENSDORG00000010133) #22	ENSDORG00000028109 #23	Susd5 (ENSDORG00000000628) #24	Crtap (ENSDORG00000000624) #25	Glb1 (ENSDORG00000008899) #26	Ccr4 (ENSDORG00000005598) #27	Trim71 (ENSDORG00000013611) #28	Cnot10 (ENSDORG00000006397) #29	Dync1li1 (ENSDORG00000009390) #31	Cmtm6 (ENSDORG00000024910) #32	Cmtm7 (ENSDORG00000027216) #33	Cmtm8 (ENSDORG00000010651) #34	ENSDORG00000024831 #35	ENSDORG00000016533 #35	Osbpl10 (ENSDORG00000001615) #36	Stt3b (ENSDORG00000009579) #37
Lagomorpha	ANCESTRAL SPECIES	6					ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37	ENSGT00940000158391
Rabbit	MODERN SPECIES	5	LRRFIP2 (ENSOCUG00000003169) #10	MLH1 (ENSOCUG00000002240) #12	EPM2AIP1 (ENSOCUG00000027586) #13	TRANK1 (ENSOCUG00000003819) #15	DCLK3 (ENSOCUG00000003654) #17	STAC (ENSOCUG00000014571) #18	ENSOCUG00000031463	ENSOCUG00000039299	ENSOCUG00000036808	ARPP21 (ENSOCUG00000009828) #19	ENSOCUG00000033149	ENSOCUG00000017800 #20	ENSOCUG00000035903	CLASP2 (ENSOCUG00000000996) #21	ENSOCUG00000037306	UBP1 (ENSOCUG00000011063) #22	FBXL2 (ENSOCUG00000034278) #23	SUSD5 (ENSOCUG00000015507) #24	CRTAP (ENSOCUG00000007741) #25	GLB1 (ENSOCUG00000005824) #26	TRIM71 (ENSOCUG00000007612) #28	CNOT10 (ENSOCUG00000011431) #29	DYNC1LI1 (ENSOCUG00000009535) #31	ENSOCUG00000000764 #32	CMTM7 (ENSOCUG00000014724) #33	CMTM8 (ENSOCUG00000035377) #34	ENSOCUG00000010093 #35	ENSOCUG00000021645	OSBPL10 (ENSOCUG00000011925) #36	STT3B (ENSOCUG00000011918) #37	ENSOCUG00000036923
Pika	MODERN SPECIES	2311														ENSOPRG00000013003 #20	CLASP2 (ENSOPRG00000012935) #21	UBP1 (ENSOPRG00000012913) #22	FBXL2 (ENSOPRG00000012890) #23
Tree shrew	MODERN SPECIES	2632															CLASP2 (ENSTBEG00000005366) #21	UBP1 (ENSTBEG00000005025) #22	FBXL2 (ENSTBEG00000004746) #23
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263710	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000179751	ENSGT00940000157880 #36
Eulipotyphla	ANCESTRAL SPECIES	1144																ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23
Hedgehog	MODERN SPECIES	4841																UBP1 (ENSEEUG00000001358) #22	FBXL2 (ENSEEUG00000001339) #23
Common shrew	MODERN SPECIES	3747																UBP1 (ENSSARG00000008670) #22	FBXL2 (ENSSARG00000008640) #23
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263710	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000179751	ENSGT00940000157880 #36
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Suina	ANCESTRAL SPECIES	1	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264025	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Pig	MODERN SPECIES	4	ITGA9 (ENSSSCG00000011245) #7	ENSSSCG00000011243 #9	ENSSSCG00000062556 #9	ENSSSCG00000037246	DCLK3 (ENSSSCG00000011241) #17	ENSSSCG00000054588	TRANK1 (ENSSSCG00000011239) #15	EPM2AIP1 (ENSSSCG00000030247) #13	ENSSSCG00000025502	MLH1 (ENSSSCG00000024222) #12	LRRFIP2 (ENSSSCG00000027738) #10	STAC (ENSSSCG00000048318) #18	ARPP21 (ENSSSCG00000011238) #19	ENSSSCG00000011237	CLASP2 (ENSSSCG00000011236) #21	UBP1 (ENSSSCG00000011235) #22	FBXL2 (ENSSSCG00000039802) #23	SUSD5 (ENSSSCG00000039358) #24	CRTAP (ENSSSCG00000051838) #25	TMPPE (ENSSSCG00000037371)	GLB1 (ENSSSCG00000024119) #26	CCR4 (ENSSSCG00000034660) #27	TRIM71 (ENSSSCG00000036996) #28	CNOT10 (ENSSSCG00000032220) #29	DYNC1LI1 (ENSSSCG00000011233) #31	ENSSSCG00000038362 #32	CMTM7 (ENSSSCG00000011234) #33	ENSSSCG00000024546	CMTM8 (ENSSSCG00000022618) #34	GPD1L (ENSSSCG00000021977) #35	ENSSSCG00000041659
Chacoan peccary	MODERN SPECIES	950	DLEC1 (ENSCWAG00000021032)	PLCD1 (ENSCWAG00000020985)	VILL (ENSCWAG00000020946)	CTDSPL (ENSCWAG00000020887)	ITGA9 (ENSCWAG00000020817) #7	GOLGA4 (ENSCWAG00000020789) #9	DCLK3 (ENSCWAG00000020770) #17	TRANK1 (ENSCWAG00000020657) #15	EPM2AIP1 (ENSCWAG00000020633) #13	MLH1 (ENSCWAG00000020596) #12	LRRFIP2 (ENSCWAG00000020544) #10	STAC (ENSCWAG00000020504) #18	ARPP21 (ENSCWAG00000020389) #19	ENSCWAG00000020346	CLASP2 (ENSCWAG00000020062) #21	UBP1 (ENSCWAG00000019946) #22	FBXL2 (ENSCWAG00000019861) #23	SUSD5 (ENSCWAG00000019828) #24	CRTAP (ENSCWAG00000019806) #25	GLB1 (ENSCWAG00000019780) #26	CCR4 (ENSCWAG00000019769) #27	TRIM71 (ENSCWAG00000019745) #28	CNOT10 (ENSCWAG00000019594) #29	DYNC1LI1 (ENSCWAG00000019528) #31	CMTM6 (ENSCWAG00000019493) #32	CMTM7 (ENSCWAG00000019463) #33	CMTM8 (ENSCWAG00000019411) #34	ENSCWAG00000019386 #35	OSBPL10 (ENSCWAG00000019293) #36	STT3B (ENSCWAG00000019147) #37	GADL1 (ENSCWAG00000019018)
Artiodactyla_a	ANCESTRAL SPECIES	18	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Artiodactyla_b	ANCESTRAL SPECIES	28	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Cetacea	ANCESTRAL SPECIES	7	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000155389.p	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263710	ENSGT01100000263628.c	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000155389.p	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263710	ENSGT01100000263628.c	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000155389.p	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263710	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000155389.p	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263710	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37	ENSGT00940000158391
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000155389.p	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000171382	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01010000224016	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Narwhal	MODERN SPECIES	310	PLCD1 (ENSMMNG00015017400)	VILL (ENSMMNG00015017280)	CTDSPL (ENSMMNG00015017177)	ITGA9 (ENSMMNG00015017083) #7	GOLGA4 (ENSMMNG00015016938) #9	DCLK3 (ENSMMNG00015016864) #17	ENSMMNG00015016829	TRANK1 (ENSMMNG00015016747) #15	EPM2AIP1 (ENSMMNG00015016713) #13	MLH1 (ENSMMNG00015016620) #12	LRRFIP2 (ENSMMNG00015016562) #10	STAC (ENSMMNG00015016495) #18	ARPP21 (ENSMMNG00015016400) #19	ENSMMNG00015016299	CLASP2 (ENSMMNG00015015887) #21	UBP1 (ENSMMNG00015015602) #22	FBXL2 (ENSMMNG00015015549) #23	SUSD5 (ENSMMNG00015015526) #24	CRTAP (ENSMMNG00015015511) #25	GLB1 (ENSMMNG00015015479) #26	CCR4 (ENSMMNG00015015464) #27	ENSMMNG00015015457	TRIM71 (ENSMMNG00015015445) #28	CNOT10 (ENSMMNG00015015402) #29	ENSMMNG00015015357	DYNC1LI1 (ENSMMNG00015015336) #31	CMTM6 (ENSMMNG00015015309) #32	CMTM7 (ENSMMNG00015015292) #33	CMTM8 (ENSMMNG00015015271) #34	ENSMMNG00015015233 #35	OSBPL10 (ENSMMNG00015015190) #36
Beluga whale	MODERN SPECIES	56	DLEC1 (ENSDLEG00000013438)	PLCD1 (ENSDLEG00000013512)	VILL (ENSDLEG00000013632)	CTDSPL (ENSDLEG00000014030)	ITGA9 (ENSDLEG00000014064) #7	GOLGA4 (ENSDLEG00000008344) #9	DCLK3 (ENSDLEG00000008606) #17	TRANK1 (ENSDLEG00000008707) #15	EPM2AIP1 (ENSDLEG00000009081) #13	MLH1 (ENSDLEG00000009212) #12	LRRFIP2 (ENSDLEG00000010265) #10	STAC (ENSDLEG00000010955) #18	ARPP21 (ENSDLEG00000011001) #19	PDCD6IP (ENSDLEG00000011121)	CLASP2 (ENSDLEG00000011627) #21	UBP1 (ENSDLEG00000016699) #22	FBXL2 (ENSDLEG00000016773) #23	SUSD5 (ENSDLEG00000017040) #24	CRTAP (ENSDLEG00000017068) #25	GLB1 (ENSDLEG00000017090) #26	CCR4 (ENSDLEG00000017153) #27	ENSDLEG00000017162	TRIM71 (ENSDLEG00000017175) #28	CNOT10 (ENSDLEG00000017186) #29	ENSDLEG00000017219	DYNC1LI1 (ENSDLEG00000017231) #31	CMTM6 (ENSDLEG00000017251) #32	CMTM7 (ENSDLEG00000017265) #33	CMTM8 (ENSDLEG00000017292) #34	GPD1L (ENSDLEG00000017317) #35	OSBPL10 (ENSDLEG00000017358) #36
Vaquita	MODERN SPECIES	2	PLCD1 (ENSPSNG00000019020)	VILL (ENSPSNG00000019145)	CTDSPL (ENSPSNG00000019319)	ITGA9 (ENSPSNG00000019404) #7	GOLGA4 (ENSPSNG00000019775) #9	DCLK3 (ENSPSNG00000020008) #17	ENSPSNG00000020064	TRANK1 (ENSPSNG00000020164) #15	EPM2AIP1 (ENSPSNG00000020375) #13	MLH1 (ENSPSNG00000020426) #12	LRRFIP2 (ENSPSNG00000020625) #10	STAC (ENSPSNG00000020796) #18	ARPP21 (ENSPSNG00000020983) #19	ENSPSNG00000007756	CLASP2 (ENSPSNG00000007999) #21	UBP1 (ENSPSNG00000008768) #22	FBXL2 (ENSPSNG00000008864) #23	SUSD5 (ENSPSNG00000008939) #24	CRTAP (ENSPSNG00000009008) #25	GLB1 (ENSPSNG00000009100) #26	CCR4 (ENSPSNG00000009160) #27	ENSPSNG00000009198	TRIM71 (ENSPSNG00000009274) #28	ENSPSNG00000009332	CNOT10 (ENSPSNG00000009474) #29	ENSPSNG00000009723	ENSPSNG00000009741	DYNC1LI1 (ENSPSNG00000009811) #31	CMTM6 (ENSPSNG00000009997) #32	CMTM7 (ENSPSNG00000010060) #33	CMTM8 (ENSPSNG00000010152) #34
Dolphin	MODERN SPECIES	2273															CLASP2 (ENSTTRG00000016793) #21	UBP1 (ENSTTRG00000016791) #22	FBXL2 (ENSTTRG00000016788) #23	SUSD5 (ENSTTRG00000016786) #24	CRTAP (ENSTTRG00000016785) #25	TMPPE (ENSTTRG00000016784)	GLB1 (ENSTTRG00000016782) #26	CCR4 (ENSTTRG00000016781) #27	TRIM71 (ENSTTRG00000016780) #28	CNOT10 (ENSTTRG00000016779) #29
Sperm whale	MODERN SPECIES	9	PLCD1 (ENSPCTG00005004424)	VILL (ENSPCTG00005004487)	ENSPCTG00005004550	ITGA9 (ENSPCTG00005004587) #7	GOLGA4 (ENSPCTG00005004721) #9	DCLK3 (ENSPCTG00005005021) #17	TRANK1 (ENSPCTG00005005161) #15	EPM2AIP1 (ENSPCTG00005005689) #13	MLH1 (ENSPCTG00005005703) #12	LRRFIP2 (ENSPCTG00005005826) #10	STAC (ENSPCTG00005006229) #18	ARPP21 (ENSPCTG00005006362) #19	ENSPCTG00005006439	PDCD6IP (ENSPCTG00005006462)	CLASP2 (ENSPCTG00005006862) #21	UBP1 (ENSPCTG00005008528) #22	FBXL2 (ENSPCTG00005008670) #23	SUSD5 (ENSPCTG00005008797) #24	CRTAP (ENSPCTG00005008849) #25	GLB1 (ENSPCTG00005008944) #26	CCR4 (ENSPCTG00005009192) #27	TRIM71 (ENSPCTG00005009209) #28	CNOT10 (ENSPCTG00005009286) #29	DYNC1LI1 (ENSPCTG00005009587) #31	CMTM6 (ENSPCTG00005009642) #32	CMTM7 (ENSPCTG00005009691) #33	CMTM8 (ENSPCTG00005009769) #34	GPD1L (ENSPCTG00005009885) #35	OSBPL10 (ENSPCTG00005009958) #36	STT3B (ENSPCTG00005010073) #37	GADL1 (ENSPCTG00005010232)
Blue whale	MODERN SPECIES	2	ENSBMSG00010022531 #9	ENSBMSG00010022530 #9	ENSBMSG00010022529 #9	DCLK3 (ENSBMSG00010022528) #17	ENSBMSG00010022527	TRANK1 (ENSBMSG00010022526) #15	EPM2AIP1 (ENSBMSG00010022525) #13	MLH1 (ENSBMSG00010022524) #12	LRRFIP2 (ENSBMSG00010022523) #10	STAC (ENSBMSG00010022522) #18	ARPP21 (ENSBMSG00010022519) #19	ENSBMSG00010022517	ENSBMSG00010022515	ENSBMSG00010022514	CLASP2 (ENSBMSG00010013160) #21	UBP1 (ENSBMSG00010011409) #22	FBXL2 (ENSBMSG00010011377) #23	SUSD5 (ENSBMSG00010011358) #24	CRTAP (ENSBMSG00010011339) #25	GLB1 (ENSBMSG00010011320) #26	CCR4 (ENSBMSG00010011298) #27	TRIM71 (ENSBMSG00010011287) #28	CNOT10 (ENSBMSG00010011215) #29	DYNC1LI1 (ENSBMSG00010011149) #31	CMTM6 (ENSBMSG00010011130) #32	CMTM7 (ENSBMSG00010011112) #33	CMTM8 (ENSBMSG00010011090) #34	ENSBMSG00010011063 #35	ENSBMSG00010011049	ENSBMSG00010011037	OSBPL10 (ENSBMSG00010011024) #36
Pecora	ANCESTRAL SPECIES	17	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37	ENSGT00940000158391
Percora_a	ANCESTRAL SPECIES	19	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37	ENSGT00940000158391
Bovidae	ANCESTRAL SPECIES	19	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37	ENSGT00940000158391
Bovinae	ANCESTRAL SPECIES	16	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a.k.a #25	ENSGT00940000154632.eb	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00950000182922.a.b.e.b.a	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36
American bison	MODERN SPECIES	2981	PLCD1 (ENSBBBG00000019979)	VILL (ENSBBBG00000005122)	CTDSPL (ENSBBBG00000019925)	ITGA9 (ENSBBBG00000005380) #7	ENSBBBG00000019844	GOLGA4 (ENSBBBG00000019820) #9	DCLK3 (ENSBBBG00000005168) #17	TRANK1 (ENSBBBG00000019712) #15	EPM2AIP1 (ENSBBBG00000019649) #13	MLH1 (ENSBBBG00000019630) #12	LRRFIP2 (ENSBBBG00000019541) #10	STAC (ENSBBBG00000008362) #18	ARPP21 (ENSBBBG00000019342) #19	PDCD6IP (ENSBBBG00000009074)	CLASP2 (ENSBBBG00000019178) #21	ENSBBBG00000018645 #22	FBXL2 (ENSBBBG00000004629) #23	SUSD5 (ENSBBBG00000018613) #24	ENSBBBG00000004605 #25	ENSBBBG00000007097	GLB1 (ENSBBBG00000018565) #26	CCR4 (ENSBBBG00000004569) #27	TRIM71 (ENSBBBG00000018536) #28	CNOT10 (ENSBBBG00000018519) #29	ENSBBBG00000018446	DYNC1LI1 (ENSBBBG00000018433) #31	CMTM6 (ENSBBBG00000004498) #32	CMTM7 (ENSBBBG00000018392) #33	CMTM8 (ENSBBBG00000018364) #34	ENSBBBG00000018344 #35	OSBPL10 (ENSBBBG00000007583) #36
Bos	ANCESTRAL SPECIES	16	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264025	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a.k.a #25	ENSGT00940000154632.eb	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00950000182922.a.b.e.b.a	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT01100000263481.n.a.b.a.b.a.a.b.b.a	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35
Bos_a	ANCESTRAL SPECIES	9	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264025	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a.k.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00950000182922.a.a.a.b.a.a.a	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT01100000263481.n.a.b.a.b.a.a.b.b.a	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36
Wild yak	MODERN SPECIES	962															CLASP2 (ENSBMUG00000009088) #21	UBP1 (ENSBMUG00000008956) #22	FBXL2 (ENSBMUG00000008901) #23	SUSD5 (ENSBMUG00000008862) #24	CRTAP (ENSBMUG00000008845) #25	ENSBMUG00000008807	GLB1 (ENSBMUG00000008798) #26	CCR4 (ENSBMUG00000008779) #27	TRIM71 (ENSBMUG00000008767) #28	CNOT10 (ENSBMUG00000008749) #29	ENSBMUG00000008677	DYNC1LI1 (ENSBMUG00000008669) #31	CMTM6 (ENSBMUG00000008652) #32
Domestic yak	MODERN SPECIES	14	VILL (ENSBGRG00000013769)	ENSBGRG00000014207	ITGA9 (ENSBGRG00000014471) #7	ENSBGRG00000014575 #9	ENSBGRG00000014786 #9	DCLK3 (ENSBGRG00000014862) #17	TRANK1 (ENSBGRG00000014964) #15	EPM2AIP1 (ENSBGRG00000015283) #13	MLH1 (ENSBGRG00000015448) #12	LRRFIP2 (ENSBGRG00000016218) #10	STAC (ENSBGRG00000017416) #18	ARPP21 (ENSBGRG00000017571) #19	ENSBGRG00000017977	ENSBGRG00000018051	CLASP2 (ENSBGRG00000018586) #21	UBP1 (ENSBGRG00000022018) #22	FBXL2 (ENSBGRG00000022197) #23	SUSD5 (ENSBGRG00000022405) #24	ENSBGRG00000022474 #25	GLB1 (ENSBGRG00000022675) #26	CCR4 (ENSBGRG00000022769) #27	TRIM71 (ENSBGRG00000022800) #28	CNOT10 (ENSBGRG00000022883) #29	ENSBGRG00000023667	ENSBGRG00000023685 #31	CMTM6 (ENSBGRG00000023747) #32	ENSBGRG00000023786	CMTM7 (ENSBGRG00000023835) #33	CMTM8 (ENSBGRG00000023917) #34	ENSBGRG00000024032 #35	OSBPL10 (ENSBGRG00000024228) #36
Bos_b	ANCESTRAL SPECIES	17	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264025	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a.k.a #25	ENSGT00940000154632.eb	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00950000182922.a.b.e.b.a	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT01100000263481.n.a.b.a.b.a.a.b.b.a	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35
Cow	MODERN SPECIES	14	PLCD1 (ENSBTAG00000037726)	VILL (ENSBTAG00000012963)	CTDSPL (ENSBTAG00000053223)	ITGA9 (ENSBTAG00000016566) #7	GOLGA4 (ENSBTAG00000016563) #9	DCLK3 (ENSBTAG00000039727) #17	TRANK1 (ENSBTAG00000021452) #15	EPM2AIP1 (ENSBTAG00000022733) #13	MLH1 (ENSBTAG00000016758) #12	LRRFIP2 (ENSBTAG00000016760) #10	STAC (ENSBTAG00000006735) #18	ARPP21 (ENSBTAG00000007732) #19	ENSBTAG00000051119	PDCD6IP (ENSBTAG00000017426)	CLASP2 (ENSBTAG00000011333) #21	UBP1 (ENSBTAG00000003968) #22	FBXL2 (ENSBTAG00000003952) #23	SUSD5 (ENSBTAG00000005327) #24	CRTAP (ENSBTAG00000021442) #25	ENSBTAG00000034871	GLB1 (ENSBTAG00000015254) #26	CCR4 (ENSBTAG00000034883) #27	TRIM71 (ENSBTAG00000022744) #28	CNOT10 (ENSBTAG00000004834) #29	ENSBTAG00000054555	DYNC1LI1 (ENSBTAG00000014700) #31	CMTM6 (ENSBTAG00000019526) #32	ENSBTAG00000050895	CMTM7 (ENSBTAG00000001712) #33	CMTM8 (ENSBTAG00000001710) #34	GPD1L (ENSBTAG00000009826) #35
Hybrid Bos Indicus	MODERN SPECIES	14	VILL (ENSBIXG00005007732)	CTDSPL (ENSBIXG00005022263)	ENSBIXG00005022220	ITGA9 (ENSBIXG00005022194) #7	ENSBIXG00005022114	GOLGA4 (ENSBIXG00005003744) #9	DCLK3 (ENSBIXG00005003708) #17	TRANK1 (ENSBIXG00005021927) #15	EPM2AIP1 (ENSBIXG00005021436) #13	MLH1 (ENSBIXG00005021401) #12	LRRFIP2 (ENSBIXG00005021264) #10	STAC (ENSBIXG00005003549) #18	ARPP21 (ENSBIXG00005003532) #19	ENSBIXG00005020652	CLASP2 (ENSBIXG00005020449) #21	UBP1 (ENSBIXG00005003021) #22	FBXL2 (ENSBIXG00005018561) #23	SUSD5 (ENSBIXG00005007654) #24	ENSBIXG00005018483 #25	ENSBIXG00005018448	GLB1 (ENSBIXG00005018417) #26	CCR4 (ENSBIXG00005002980) #27	TRIM71 (ENSBIXG00005018379) #28	CNOT10 (ENSBIXG00005018346) #29	ENSBIXG00005018213	DYNC1LI1 (ENSBIXG00005018184) #31	CMTM6 (ENSBIXG00005018160) #32	ENSBIXG00005018124 #34	ENSBIXG00005018096 #35	OSBPL10 (ENSBIXG00005018070) #36	STT3B (ENSBIXG00005018011) #37
Caprinae	ANCESTRAL SPECIES	15	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.w.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37	ENSGT00940000158391
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	10	PLCD1 (ENSOARG00020025854)	VILL (ENSOARG00020025822)	CTDSPL (ENSOARG00020025807)	ITGA9 (ENSOARG00020025800) #7	GOLGA4 (ENSOARG00020025783) #9	DCLK3 (ENSOARG00020025768) #17	TRANK1 (ENSOARG00020025761) #15	EPM2AIP1 (ENSOARG00020025757) #13	ENSOARG00020025756	MLH1 (ENSOARG00020025753) #12	LRRFIP2 (ENSOARG00020025704) #10	STAC (ENSOARG00020025681) #18	ARPP21 (ENSOARG00020025663) #19	PDCD6IP (ENSOARG00020025655)	CLASP2 (ENSOARG00020025138) #21	ENSOARG00020024961 #22	FBXL2 (ENSOARG00020024907) #23	CRTAP (ENSOARG00020024874) #25	ENSOARG00020024863	CCR4 (ENSOARG00020024855) #27	ENSOARG00020024808 #26	TRIM71 (ENSOARG00020024789) #28	CNOT10 (ENSOARG00020024662) #29	DYNC1LI1 (ENSOARG00020024520) #31	CMTM6 (ENSOARG00020024489) #32	ENSOARG00020024478	CMTM7 (ENSOARG00020024446) #33	ENSOARG00020024424 #34	GPD1L (ENSOARG00020024414) #35	STT3B (ENSOARG00020024362) #37	OSBPL10 (ENSOARG00020024245) #36
Rambouillet Sheep	MODERN SPECIES	5	ENSOARG00020011200	ENSOARG00020011236	ENSOARG00020011280	ENSOARG00020011304	ENSOARG00020011338	ENSOARG00020011360	ENSOARG00020011481	ENSOARG00020011500	ENSOARG00020011532	ENSOARG00020011565	ENSOARG00020011630	ENSOARG00020011674	ENSOARG00020011733	ENSOARG00020011764	ENSOARG00020011888	ENSOARG00020011955 #22	ENSOARG00020012031	ENSOARG00020012067	ENSOARG00020012875	ENSOARG00020012957	ENSOARG00020013001	ENSOARG00020013034	ENSOARG00020013073	ENSOARG00020013097	ENSOARG00020013141	ENSOARG00020013175	ENSOARG00020013216	ENSOARG00020013367	ENSOARG00020013581	ENSOARG00020013650	ENSOARG00020013696
Goat	MODERN SPECIES	14	PLCD1 (ENSCHIG00000012504)	VILL (ENSCHIG00000021533)	CTDSPL (ENSCHIG00000015918)	ENSCHIG00000009750	ITGA9 (ENSCHIG00000021157) #7	GOLGA4 (ENSCHIG00000016192) #9	DCLK3 (ENSCHIG00000020580) #17	TRANK1 (ENSCHIG00000026535) #15	EPM2AIP1 (ENSCHIG00000006585) #13	MLH1 (ENSCHIG00000011953) #12	LRRFIP2 (ENSCHIG00000021299) #10	STAC (ENSCHIG00000025466) #18	ARPP21 (ENSCHIG00000014318) #19	PDCD6IP (ENSCHIG00000027185)	CLASP2 (ENSCHIG00000017596) #21	UBP1 (ENSCHIG00000021781) #22	FBXL2 (ENSCHIG00000013784) #23	SUSD5 (ENSCHIG00000008055) #24	CRTAP (ENSCHIG00000020384) #25	GLB1 (ENSCHIG00000014228) #26	CCR4 (ENSCHIG00000020041) #27	TRIM71 (ENSCHIG00000018441) #28	CNOT10 (ENSCHIG00000008987) #29	DYNC1LI1 (ENSCHIG00000024586) #31	CMTM6 (ENSCHIG00000010775) #32	CMTM7 (ENSCHIG00000022116) #33	CMTM8 (ENSCHIG00000015869) #34	ENSCHIG00000011554 #35	OSBPL10 (ENSCHIG00000017764) #36	STT3B (ENSCHIG00000013391) #37	ENSCHIG00000020290
Siberian musk deer	MODERN SPECIES	1219	CTDSPL (ENSMMSG00000023890)	ITGA9 (ENSMMSG00000023912) #7	ENSMMSG00000023927	ENSMMSG00000023933	GOLGA4 (ENSMMSG00000023943) #9	DCLK3 (ENSMMSG00000023981) #17	TRANK1 (ENSMMSG00000023994) #15	EPM2AIP1 (ENSMMSG00000024012) #13	MLH1 (ENSMMSG00000024032) #12	LRRFIP2 (ENSMMSG00000024059) #10	STAC (ENSMMSG00000024133) #18	ARPP21 (ENSMMSG00000024149) #19	ENSMMSG00000024163	ENSMMSG00000020147	CLASP2 (ENSMMSG00000020282) #21	UBP1 (ENSMMSG00000020917) #22	FBXL2 (ENSMMSG00000021006) #23	SUSD5 (ENSMMSG00000021076) #24	CRTAP (ENSMMSG00000021099) #25	GLB1 (ENSMMSG00000021141) #26	CCR4 (ENSMMSG00000021275) #27	TRIM71 (ENSMMSG00000021287) #28	CNOT10 (ENSMMSG00000021363) #29	DYNC1LI1 (ENSMMSG00000021639) #31	CMTM6 (ENSMMSG00000021664) #32	CMTM7 (ENSMMSG00000021688) #33	CMTM8 (ENSMMSG00000021710) #34	ENSMMSG00000021735 #35	OSBPL10 (ENSMMSG00000021752) #36	ENSMMSG00000021768 #37
Yarkand deer	MODERN SPECIES	16	ITGA9 (ENSCHYG00000019698) #7	ENSCHYG00000020164	GOLGA4 (ENSCHYG00000020281) #9	DCLK3 (ENSCHYG00000021985) #17	TRANK1 (ENSCHYG00000022098) #15	EPM2AIP1 (ENSCHYG00000022605) #13	MLH1 (ENSCHYG00000022653) #12	ENSCHYG00000023050 #10	STAC (ENSCHYG00000023619) #18	ARPP21 (ENSCHYG00000023809) #19	ENSCHYG00000024073	ENSCHYG00000024082	ENSCHYG00000024143	CLASP2 (ENSCHYG00000024648) #21	ENSCHYG00000026804	UBP1 (ENSCHYG00000026826) #22	FBXL2 (ENSCHYG00000026868) #23	SUSD5 (ENSCHYG00000026913) #24	CRTAP (ENSCHYG00000026926) #25	ENSCHYG00000026943 #26	CCR4 (ENSCHYG00000026954) #27	TRIM71 (ENSCHYG00000026957) #28	CNOT10 (ENSCHYG00000026965) #29	ENSCHYG00000026992 #31	CMTM6 (ENSCHYG00000027000) #32	CMTM7 (ENSCHYG00000027004) #33	CMTM8 (ENSCHYG00000027008) #34	ENSCHYG00000027011 #35	OSBPL10 (ENSCHYG00000027022) #36	STT3B (ENSCHYG00000027034) #37	GADL1 (ENSCHYG00000027050)
Camelidae	ANCESTRAL SPECIES	7	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264173	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27
Arabian camel	MODERN SPECIES	8	PLCD1 (ENSCDRG00005017073)	VILL (ENSCDRG00005016992)	CTDSPL (ENSCDRG00005016829)	ITGA9 (ENSCDRG00005016528) #7	GOLGA4 (ENSCDRG00005015319) #9	LRRFIP2 (ENSCDRG00005014822) #10	MLH1 (ENSCDRG00005014605) #12	EPM2AIP1 (ENSCDRG00005014584) #13	TRANK1 (ENSCDRG00005014501) #15	DCLK3 (ENSCDRG00005014456) #17	STAC (ENSCDRG00005014276) #18	ARPP21 (ENSCDRG00005014003) #19	ENSCDRG00005013888	ENSCDRG00005013481	CLASP2 (ENSCDRG00005012977) #21	UBP1 (ENSCDRG00005012680) #22	FBXL2 (ENSCDRG00005012349) #23	SUSD5 (ENSCDRG00005012294) #24	CRTAP (ENSCDRG00005012207) #25	GLB1 (ENSCDRG00005012114) #26	CCR4 (ENSCDRG00005012095) #27	DYNC1LI1 (ENSCDRG00005012007) #31	CNOT10 (ENSCDRG00005011506) #29	TRIM71 (ENSCDRG00005011456) #28	CMTM6 (ENSCDRG00005011417) #32	CMTM7 (ENSCDRG00005011356) #33	CMTM8 (ENSCDRG00005011245) #34	GPD1L (ENSCDRG00005011126) #35	OSBPL10 (ENSCDRG00005010810) #36	STT3B (ENSCDRG00005010707) #37	GADL1 (ENSCDRG00005010570)
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00390000004487 #8	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000179751	ENSGT00940000157880 #36
Carnivora	ANCESTRAL SPECIES	10			ENSGT00940000162289	ENSGT00940000162801	ENSGT00940000163766	ENSGT00940000164428.f.a	ENSGT00940000164428.e	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00390000016277.a	ENSGT00940000157537	ENSGT00940000176159	ENSGT00940000155365.a.a	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT01100000264173	ENSGT00940000160796 #19	ENSGT00950000183092.b.b #18	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12
Caniformia	ANCESTRAL SPECIES		ENSGT00950000183148.b.b	ENSGT00940000160517	ENSGT00390000013968	ENSGT00660000095541.a.a	ENSGT00390000003094	ENSGT00940000164428.e	ENSGT00940000164428.f.b	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00390000016277.a	ENSGT00940000157537	ENSGT00940000176159	ENSGT00940000155365.a.a	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT01100000264173	ENSGT00940000160796 #19	ENSGT00950000183092.b.b #18	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12
Caniformia_b	ANCESTRAL SPECIES		ENSGT00950000183148.b.b	ENSGT00940000160517	ENSGT00390000013968	ENSGT00660000095541.a.a	ENSGT00390000003094	ENSGT00940000164428.e	ENSGT00940000164428.f.b	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00390000016277.a	ENSGT00940000157537	ENSGT00940000176159	ENSGT00940000155365.a.a	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT01100000264173	ENSGT00940000160796 #19	ENSGT00950000183092.b.b #18	ENSGT00940000170470	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12
Ursidae	ANCESTRAL SPECIES	1						ENSGT00940000164428.e	ENSGT00940000164428.f.b	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00390000016277.a	ENSGT00940000157537	ENSGT00940000176159	ENSGT00940000155365.a.a	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00940000153664.A.a.m.b.b.a.b	ENSGT01100000264173	ENSGT00940000160796 #19	ENSGT00950000183092.b.b #18	ENSGT00940000170470	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13
Ursus	ANCESTRAL SPECIES	56						ENSGT00940000164428.e	ENSGT00940000164428.f.b	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00390000016277.a	ENSGT00940000157537.bb	ENSGT00940000176159	ENSGT00940000155365.a.a	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00940000153664.A.a.m.b.b.a.b	ENSGT01100000264173	ENSGT00940000160796 #19	ENSGT00950000183092.b.b #18	ENSGT00940000170470	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13
American black bear	MODERN SPECIES	511															CLASP2 (ENSUAMG00000022209) #21	UBP1 (ENSUAMG00000022092) #22	FBXL2 (ENSUAMG00000022087) #23	SUSD5 (ENSUAMG00000022086) #24	CRTAP (ENSUAMG00000022077) #25	GLB1 (ENSUAMG00000022070) #26
Polar bear	MODERN SPECIES	112						ENSUMAG00000015390	ENSUMAG00000015381	ZNF445 (ENSUMAG00000015369)	TCAIM (ENSUMAG00000015356)	TOPAZ1 (ENSUMAG00000015283)	ABHD5 (ENSUMAG00000015208)	ENSUMAG00000015207	ENSUMAG00000015184	ENSUMAG00000015182	CLASP2 (ENSUMAG00000008980) #21	UBP1 (ENSUMAG00000008170) #22	FBXL2 (ENSUMAG00000008154) #23	SUSD5 (ENSUMAG00000008126) #24	CRTAP (ENSUMAG00000008118) #25	GLB1 (ENSUMAG00000007503) #26	CCR4 (ENSUMAG00000007446) #27	CNOT10 (ENSUMAG00000007431) #29	ENSUMAG00000007423	ENSUMAG00000006668	ARPP21 (ENSUMAG00000006519) #19	STAC (ENSUMAG00000006496) #18	ENSUMAG00000006479	DCLK3 (ENSUMAG00000006475) #17	TRANK1 (ENSUMAG00000006416) #15	EPM2AIP1 (ENSUMAG00000006407) #13	MLH1 (ENSUMAG00000006371) #12
Giant Panda	MODERN SPECIES	16	CST7 (ENSAMEG00000014248)	APMAP (ENSAMEG00000014230)	ACSS1 (ENSAMEG00000014206)	ENSAMEG00000003561	PYGB (ENSAMEG00000003436)	ABHD12 (ENSAMEG00000003400)	ENSAMEG00000028823	ENSAMEG00000001886	ENSAMEG00000026067	ENSAMEG00000009413	TOPAZ1 (ENSAMEG00000027745)	ABHD5 (ENSAMEG00000015600)	ENSAMEG00000015613	ENSAMEG00000005957	ENSAMEG00000002236 #21	UBP1 (ENSAMEG00000002341) #22	FBXL2 (ENSAMEG00000002391) #23	SUSD5 (ENSAMEG00000002441) #24	CRTAP (ENSAMEG00000002444) #25	GLB1 (ENSAMEG00000029108) #26	CCR4 (ENSAMEG00000020234) #27	ENSAMEG00000023809	ENSAMEG00000002481 #28	ENSAMEG00000002482 #29	ENSAMEG00000020235	ENSAMEG00000002537	ENSAMEG00000017937 #19	STAC (ENSAMEG00000017932) #18	DCLK3 (ENSAMEG00000017930) #17	TRANK1 (ENSAMEG00000017925) #15	EPM2AIP1 (ENSAMEG00000019899) #13
Mustelinae	ANCESTRAL SPECIES	174									ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00390000016277.a	ENSGT00940000157537	ENSGT00940000155365.a.a	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29
Ferret	MODERN SPECIES	353						ENSMPUG00000012880	ENSMPUG00000019641	ZNF445 (ENSMPUG00000012887)	TCAIM (ENSMPUG00000012890)	TOPAZ1 (ENSMPUG00000012903)	ENSMPUG00000019643	ABHD5 (ENSMPUG00000012931)	ANO10 (ENSMPUG00000012971)	SNRK (ENSMPUG00000012977)	CLASP2 (ENSMPUG00000012992) #21	UBP1 (ENSMPUG00000013008) #22	FBXL2 (ENSMPUG00000013018) #23	SUSD5 (ENSMPUG00000013095) #24	ENSMPUG00000013108	CRTAP (ENSMPUG00000013111) #25	GLB1 (ENSMPUG00000013118) #26	TRIM71 (ENSMPUG00000013126) #28	ENSMPUG00000013133	CNOT10 (ENSMPUG00000013138) #29	PDCD6IP (ENSMPUG00000013234)
American mink	MODERN SPECIES	252									ENSNVIG00000003738	TOPAZ1 (ENSNVIG00000003771)	ABHD5 (ENSNVIG00000003851)	ANO10 (ENSNVIG00000003884)	SNRK (ENSNVIG00000004096)	ENSNVIG00000004109	CLASP2 (ENSNVIG00000004171) #21	UBP1 (ENSNVIG00000005119) #22	FBXL2 (ENSNVIG00000005594) #23	SUSD5 (ENSNVIG00000005632) #24	CRTAP (ENSNVIG00000005645) #25	GLB1 (ENSNVIG00000005670) #26	CCR4 (ENSNVIG00000005685) #27	TRIM71 (ENSNVIG00000005717) #28	CNOT10 (ENSNVIG00000005728) #29	ENSNVIG00000005789
Canidae	ANCESTRAL SPECIES	24	ENSGT01100000263540.A.a	ENSGT00950000183148.b.b	ENSGT00940000160517	ENSGT00390000013968	ENSGT00660000095541.a.a	ENSGT00390000003094	ENSGT00940000164428.e	ENSGT00940000164428.f.b	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00390000016277.a	ENSGT00940000157537	ENSGT00940000155365.a.a	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT01100000263710	ENSGT00940000160796 #19	ENSGT00950000183092.b.b #18	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12
Canis_lupus	ANCESTRAL SPECIES	27	ENSGT01100000263540.A.a	ENSGT00950000183148.b.b	ENSGT00940000160517	ENSGT00390000013968	ENSGT00660000095541.a.a	ENSGT00390000003094.c	ENSGT00940000164428.e	ENSGT00940000164428.f.b	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00390000016277.a	ENSGT00940000157537	ENSGT00940000155365.a.a	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT01100000263710	ENSGT00940000163083 #20	ENSGT00940000160796 #19	ENSGT00950000183092.b.b #18	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13
Dingo	MODERN SPECIES	326	GINS1 (ENSCAFG00020005786)	NINL (ENSCAFG00020005723)	ENSCAFG00020005719	ENSCAFG00020005712	ENSCAFG00020005711	ZNF445 (ENSCAFG00020005703)	TCAIM (ENSCAFG00020005698)	TOPAZ1 (ENSCAFG00020005672)	ENSCAFG00020005662	ABHD5 (ENSCAFG00020005633)	ENSCAFG00020005630	ENSCAFG00020005627	ANO10 (ENSCAFG00020005621)	SNRK (ENSCAFG00020005597)	CLASP2 (ENSCAFG00020002594) #21	UBP1 (ENSCAFG00020002404) #22	FBXL2 (ENSCAFG00020002395) #23	ENSCAFG00020002387	ENSCAFG00020002380	ENSCAFG00020002378 #24	CRTAP (ENSCAFG00020002375) #25	TMPPE (ENSCAFG00020002374)	GLB1 (ENSCAFG00020002368) #26	CCR4 (ENSCAFG00020002363) #27	TRIM71 (ENSCAFG00020002354) #28	CNOT10 (ENSCAFG00020001836) #29	ENSCAFG00020001754	ENSCAFG00020001741 #20	ENSCAFG00020001731	ARPP21 (ENSCAFG00020001655) #19	STAC (ENSCAFG00020001553) #18
Dog	MODERN SPECIES	15	NINL (ENSCAFG00845029110)	NANP (ENSCAFG00845029217)	ENSCAFG00845029250	ENSCAFG00845019227	ZNF445 (ENSCAFG00845019305)	ENSCAFG00845019385	ENSCAFG00845019630	ENSCAFG00845019724	ABHD5 (ENSCAFG00845020085)	ENSCAFG00845020170	ENSCAFG00845020203	ENSCAFG00845020239	ENSCAFG00845020275	SNRK (ENSCAFG00845020337)	CLASP2 (ENSCAFG00845020608) #21	UBP1 (ENSCAFG00845022384) #22	FBXL2 (ENSCAFG00845022675) #23	SUSD5 (ENSCAFG00845023061) #24	CRTAP (ENSCAFG00845023248) #25	GLB1 (ENSCAFG00845023378) #26	TMPPE (ENSCAFG00845023550)	CCR4 (ENSCAFG00845023571) #27	TRIM71 (ENSCAFG00845023600) #28	CNOT10 (ENSCAFG00845023808) #29	ENSCAFG00845024788	ARPP21 (ENSCAFG00845025149) #19	STAC (ENSCAFG00845025749) #18	TRANK1 (ENSCAFG00845026194) #15	EPM2AIP1 (ENSCAFG00845026884) #13	MLH1 (ENSCAFG00845027002) #12	LRRFIP2 (ENSCAFG00845027518) #10
Red fox	MODERN SPECIES	122	ABHD12 (ENSVVUG00000022271)	GINS1 (ENSVVUG00000022265)	NINL (ENSVVUG00000022254)	ENSVVUG00000022250	NANP (ENSVVUG00000022249)	ZKSCAN7 (ENSVVUG00000022246)	ENSVVUG00000022234	ZNF445 (ENSVVUG00000022223)	TCAIM (ENSVVUG00000022195)	TOPAZ1 (ENSVVUG00000022169)	ENSVVUG00000022167	ABHD5 (ENSVVUG00000022141)	ANO10 (ENSVVUG00000022136)	SNRK (ENSVVUG00000022132)	CLASP2 (ENSVVUG00000022104) #21	UBP1 (ENSVVUG00000022100) #22	FBXL2 (ENSVVUG00000022097) #23	ENSVVUG00000022094	SUSD5 (ENSVVUG00000022093) #24	CRTAP (ENSVVUG00000022092) #25	TMPPE (ENSVVUG00000022091)	GLB1 (ENSVVUG00000022090) #26	CCR4 (ENSVVUG00000022087) #27	TRIM71 (ENSVVUG00000022082) #28	CNOT10 (ENSVVUG00000022068) #29	PDCD6IP (ENSVVUG00000022059)	ENSVVUG00000022045	ENSVVUG00000022028	ARPP21 (ENSVVUG00000021975) #19	STAC (ENSVVUG00000021951) #18	ENSVVUG00000021949
Felidae	ANCESTRAL SPECIES	9			ENSGT00940000162289	ENSGT00940000162801	ENSGT00940000163766	ENSGT00940000164428.f.a.a	ENSGT00940000164428.f.b	ENSGT00940000164428.f.a.b	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00390000016277.a	ENSGT00940000157537	ENSGT00940000155365.a.a	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00940000163083 #20	ENSGT00940000160796 #19	ENSGT00950000183092.b.b #18	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12
Panthera	ANCESTRAL SPECIES	12			ENSGT00940000162289	ENSGT00940000162801	ENSGT00940000163766	ENSGT00940000164428.f.a.a	ENSGT00940000164428.f.a.b	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00940000158501.z	ENSGT00390000016277.a	ENSGT00940000157537	ENSGT00940000155365.a.a	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00940000163083 #20	ENSGT00940000160796 #19	ENSGT00950000183092.b.b #18	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12
Panthera_a	ANCESTRAL SPECIES	17			ENSGT00940000162289	ENSGT00940000162801	ENSGT00940000163766	ENSGT00940000164428.f.a.a	ENSGT00940000164428.f.a.b	ENSGT00900000141186	ENSGT00390000012832	ENSGT00390000012495	ENSGT00940000158501.z	ENSGT00390000016277.a	ENSGT00940000157537	ENSGT00940000155365.a.a	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00940000163083 #20	ENSGT00940000160796 #19	ENSGT00950000183092.b.b #18	ENSGT00940000159476 #17	ENSGT00940000153370.b #15	ENSGT00950000182812.E #13	ENSGT00800000124177 #12	ENSGT00530000063564.a #10
leopard	MODERN SPECIES	75			ZNF35 (ENSPPRG00000011060)	ZNF197 (ENSPPRG00000010667)	ZNF660 (ENSPPRG00000017110)	ENSPPRG00000010230	ENSPPRG00000009775	ZNF445 (ENSPPRG00000009533)	TCAIM (ENSPPRG00000009299)	TOPAZ1 (ENSPPRG00000008934)	ENSPPRG00000008463	ABHD5 (ENSPPRG00000008335)	ANO10 (ENSPPRG00000007666)	SNRK (ENSPPRG00000006369)	CLASP2 (ENSPPRG00000005179) #21	UBP1 (ENSPPRG00000014176) #22	FBXL2 (ENSPPRG00000012802) #23	SUSD5 (ENSPPRG00000011926) #24	CRTAP (ENSPPRG00000011752) #25	GLB1 (ENSPPRG00000011080) #26	CCR4 (ENSPPRG00000016036) #27	TRIM71 (ENSPPRG00000010150) #28	CNOT10 (ENSPPRG00000009955) #29	ENSPPRG00000007728 #20	ARPP21 (ENSPPRG00000006681) #19	STAC (ENSPPRG00000002159) #18	DCLK3 (ENSPPRG00000001743) #17	TRANK1 (ENSPPRG00000000968) #15	EPM2AIP1 (ENSPPRG00000015660) #13	MLH1 (ENSPPRG00000019234) #12	LRRFIP2 (ENSPPRG00000012905) #10
lion	MODERN SPECIES	9								ZNF445 (ENSPLOG00000004927)	TCAIM (ENSPLOG00000004956)	TOPAZ1 (ENSPLOG00000005016)	ENSPLOG00000005102	ABHD5 (ENSPLOG00000005139)	ANO10 (ENSPLOG00000005223)	SNRK (ENSPLOG00000005283)	CLASP2 (ENSPLOG00000005469) #21	UBP1 (ENSPLOG00000006293) #22	FBXL2 (ENSPLOG00000006395) #23	SUSD5 (ENSPLOG00000006511) #24	CRTAP (ENSPLOG00000006543) #25	GLB1 (ENSPLOG00000006606) #26	CCR4 (ENSPLOG00000006627) #27	TRIM71 (ENSPLOG00000006648) #28	CNOT10 (ENSPLOG00000006710) #29	ENSPLOG00000006862	ENSPLOG00000006909	ARPP21 (ENSPLOG00000007123) #19	STAC (ENSPLOG00000007219) #18	ENSPLOG00000007312	DCLK3 (ENSPLOG00000007340) #17	TRANK1 (ENSPLOG00000007377) #15	EPM2AIP1 (ENSPLOG00000007490) #13
Tiger	MODERN SPECIES	597			ZNF35 (ENSPTIG00000012753)	ZNF197 (ENSPTIG00000012886)	ZNF660 (ENSPTIG00000009939)	ENSPTIG00000012983	ENSPTIG00000013090	ZNF445 (ENSPTIG00000013152)	TCAIM (ENSPTIG00000013194)	TOPAZ1 (ENSPTIG00000013534)	ENSPTIG00000013759	ABHD5 (ENSPTIG00000013792)	ANO10 (ENSPTIG00000013928)	SNRK (ENSPTIG00000014446)	CLASP2 (ENSPTIG00000014763) #21	UBP1 (ENSPTIG00000017011) #22	FBXL2 (ENSPTIG00000017322) #23	SUSD5 (ENSPTIG00000017538) #24	CRTAP (ENSPTIG00000017634) #25	TMPPE (ENSPTIG00000009987)	GLB1 (ENSPTIG00000017781) #26	CCR4 (ENSPTIG00000009992) #27	TRIM71 (ENSPTIG00000017889) #28	CNOT10 (ENSPTIG00000017926) #29
Cat	MODERN SPECIES	240				ZNF35 (ENSFCAG00000044663)	ZNF197 (ENSFCAG00000021993)	ENSFCAG00000041966	ENSFCAG00000039929	ZNF445 (ENSFCAG00000037459)	TCAIM (ENSFCAG00000015168)	ENSFCAG00000032326	TOPAZ1 (ENSFCAG00000027563)	ABHD5 (ENSFCAG00000008874)	ANO10 (ENSFCAG00000003237)	SNRK (ENSFCAG00000029507)	CLASP2 (ENSFCAG00000006124) #21	UBP1 (ENSFCAG00000006123) #22	FBXL2 (ENSFCAG00000006121) #23	ENSFCAG00000052504	SUSD5 (ENSFCAG00000002920) #24	CRTAP (ENSFCAG00000018183) #25	GLB1 (ENSFCAG00000028444) #26	CCR4 (ENSFCAG00000002919) #27	TRIM71 (ENSFCAG00000002918) #28	CNOT10 (ENSFCAG00000002916) #29	PDCD6IP (ENSFCAG00000022852) #20	ARPP21 (ENSFCAG00000013391) #19	STAC (ENSFCAG00000005011) #18	DCLK3 (ENSFCAG00000022392) #17	TRANK1 (ENSFCAG00000004817) #15	EPM2AIP1 (ENSFCAG00000030150) #13	MLH1 (ENSFCAG00000001371) #12
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Chiroptera	ANCESTRAL SPECIES	19	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Microchiroptera	ANCESTRAL SPECIES	16	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000263628	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Greater horseshoe bat	MODERN SPECIES	8	VILL (ENSRFEG00010021183)	CTDSPL (ENSRFEG00010021213)	ITGA9 (ENSRFEG00010021275) #7	GOLGA4 (ENSRFEG00010021350) #9	LRRFIP2 (ENSRFEG00010021479) #10	MLH1 (ENSRFEG00010021555) #12	EPM2AIP1 (ENSRFEG00010021591) #13	TRANK1 (ENSRFEG00010021598) #15	DCLK3 (ENSRFEG00010021623) #17	STAC (ENSRFEG00010021640) #18	ENSRFEG00010021648	ARPP21 (ENSRFEG00010021667) #19	ENSRFEG00010021696	PDCD6IP (ENSRFEG00010005339)	CLASP2 (ENSRFEG00010005659) #21	UBP1 (ENSRFEG00010006227) #22	FBXL2 (ENSRFEG00010006318) #23	SUSD5 (ENSRFEG00010006366) #24	CRTAP (ENSRFEG00010006405) #25	GLB1 (ENSRFEG00010006454) #26	ENSRFEG00010006513	CCR4 (ENSRFEG00010006527) #27	TRIM71 (ENSRFEG00010006548) #28	CNOT10 (ENSRFEG00010006629) #29	DYNC1LI1 (ENSRFEG00010006794) #31	CMTM6 (ENSRFEG00010006857) #32	CMTM8 (ENSRFEG00010006920) #34	GPD1L (ENSRFEG00010007017) #35	OSBPL10 (ENSRFEG00010007069) #36	STT3B (ENSRFEG00010007149) #37	GADL1 (ENSRFEG00010007234)
Microbat	MODERN SPECIES	976														PDCD6IP (ENSMLUG00000006659)	CLASP2 (ENSMLUG00000009490) #21	UBP1 (ENSMLUG00000010827) #22	FBXL2 (ENSMLUG00000010809) #23	SUSD5 (ENSMLUG00000014456) #24	CRTAP (ENSMLUG00000014448) #25	TMPPE (ENSMLUG00000014444)	GLB1 (ENSMLUG00000014432) #26	CCR4 (ENSMLUG00000029205) #27	TRIM71 (ENSMLUG00000022658) #28	CNOT10 (ENSMLUG00000015925) #29	DYNC1LI1 (ENSMLUG00000000229) #31	CMTM6 (ENSMLUG00000000227) #32	ENSMLUG00000012799 #33	CMTM8 (ENSMLUG00000012796) #34	GPD1L (ENSMLUG00000016861) #35	OSBPL10 (ENSMLUG00000000572) #36	STT3B (ENSMLUG00000000563) #37
Megabat	MODERN SPECIES	2682															CLASP2 (ENSPVAG00000004159) #21	UBP1 (ENSPVAG00000004158) #22	FBXL2 (ENSPVAG00000004157) #23	SUSD5 (ENSPVAG00000004156) #24	CRTAP (ENSPVAG00000004155) #25	TMPPE (ENSPVAG00000004154)	GLB1 (ENSPVAG00000004153) #26	CCR4 (ENSPVAG00000004152) #27	TRIM71 (ENSPVAG00000004150) #28	CNOT10 (ENSPVAG00000004149) #29
Equus	ANCESTRAL SPECIES	5	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Donkey	MODERN SPECIES	13	PLCD1 (ENSEASG00005007479)	VILL (ENSEASG00005007472)	CTDSPL (ENSEASG00005007457)	ITGA9 (ENSEASG00005007449) #7	GOLGA4 (ENSEASG00005007416) #9	LRRFIP2 (ENSEASG00005007395) #10	MLH1 (ENSEASG00005007389) #12	EPM2AIP1 (ENSEASG00005007387) #13	TRANK1 (ENSEASG00005007374) #15	DCLK3 (ENSEASG00005007362) #17	STAC (ENSEASG00005007347) #18	ARPP21 (ENSEASG00005007331) #19	PDCD6IP (ENSEASG00005007194)	ENSEASG00005024723	CLASP2 (ENSEASG00005006318) #21	UBP1 (ENSEASG00005006204) #22	ENSEASG00005031617 #23	ENSEASG00005032111 #23	SUSD5 (ENSEASG00005006200) #24	CRTAP (ENSEASG00005006198) #25	TMPPE (ENSEASG00005031717)	GLB1 (ENSEASG00005006196) #26	CCR4 (ENSEASG00005031493) #27	TRIM71 (ENSEASG00005006192) #28	CNOT10 (ENSEASG00005006189) #29	DYNC1LI1 (ENSEASG00005006183) #31	CMTM6 (ENSEASG00005034157) #32	CMTM7 (ENSEASG00005034930) #33	CMTM8 (ENSEASG00005006179) #34	GPD1L (ENSEASG00005006178) #35	OSBPL10 (ENSEASG00005006177) #36
Horse	MODERN SPECIES	7	PLCD1 (ENSECAG00000023703)	VILL (ENSECAG00000012325)	ITGA9 (ENSECAG00000007848) #7	GOLGA4 (ENSECAG00000013495) #9	ENSECAG00000055774	LRRFIP2 (ENSECAG00000021270) #10	MLH1 (ENSECAG00000000690) #12	EPM2AIP1 (ENSECAG00000004874) #13	TRANK1 (ENSECAG00000018264) #15	ENSECAG00000020152	DCLK3 (ENSECAG00000020294) #17	STAC (ENSECAG00000021165) #18	ARPP21 (ENSECAG00000022872) #19	PDCD6IP (ENSECAG00000004691) #20	CLASP2 (ENSECAG00000015474) #21	UBP1 (ENSECAG00000018555) #22	FBXL2 (ENSECAG00000024909) #23	SUSD5 (ENSECAG00000007972) #24	CRTAP (ENSECAG00000008409) #25	GLB1 (ENSECAG00000011942) #26	ENSECAG00000049408	CCR4 (ENSECAG00000005023) #27	TRIM71 (ENSECAG00000020845) #28	CNOT10 (ENSECAG00000021306) #29	DYNC1LI1 (ENSECAG00000010584) #31	CMTM6 (ENSECAG00000038275) #32	CMTM7 (ENSECAG00000036991) #33	ENSECAG00000051952	CMTM8 (ENSECAG00000017450) #34	GPD1L (ENSECAG00000018150) #35	OSBPL10 (ENSECAG00000023266) #36
Atlantogenata	ANCESTRAL SPECIES	58	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264173	ENSGT01100000266249	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37
Xenarthra	ANCESTRAL SPECIES	71		ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT01100000266249	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	2803	ENSDNOG00000010025	CTDSPL (ENSDNOG00000044323)	ENSDNOG00000047709	ITGA9 (ENSDNOG00000009308) #7	GOLGA4 (ENSDNOG00000049325) #9	LRRFIP2 (ENSDNOG00000018861) #10	MLH1 (ENSDNOG00000014454) #12	EPM2AIP1 (ENSDNOG00000044286) #13	TRANK1 (ENSDNOG00000003573) #15	DCLK3 (ENSDNOG00000043600) #17	STAC (ENSDNOG00000036208) #18	ENSDNOG00000046156	ARPP21 (ENSDNOG00000014858) #19	ENSDNOG00000046339	CLASP2 (ENSDNOG00000006773) #21	ENSDNOG00000019550 #22	FBXL2 (ENSDNOG00000012333) #23	SUSD5 (ENSDNOG00000042446) #24	ENSDNOG00000046716	CRTAP (ENSDNOG00000039885) #25	TMPPE (ENSDNOG00000038198)	GLB1 (ENSDNOG00000036154) #26	CCR4 (ENSDNOG00000016020) #27	TRIM71 (ENSDNOG00000037575) #28	CNOT10 (ENSDNOG00000002358) #29	DYNC1LI1 (ENSDNOG00000003024) #31	ENSDNOG00000015014 #32	ENSDNOG00000042517 #33	CMTM8 (ENSDNOG00000016154) #34	GPD1L (ENSDNOG00000039932) #35
Armadillo	MODERN SPECIES	546																ENSDNOG00000018905 #22	ENSDNOG00000044876
Sloth	MODERN SPECIES	4305																UBP1 (ENSCHOG00000001692) #22	FBXL2 (ENSCHOG00000001683) #23
Afrotheria	ANCESTRAL SPECIES	70	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264173	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37	ENSGT00940000158391	ENSGT00940000157527
Afrotheria_a	DUPLICATION
Afrotheria_a	ANCESTRAL SPECIES	67	ENSGT01030000234626.C	ENSGT00390000006098	ENSGT00940000158392	ENSGT00940000160253	ENSGT01040000240451.a.b.b.d	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000182812.E #13	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT01100000264173	ENSGT00940000155574.C #21	ENSGT00940000156148.k #22	ENSGT00940000153845.a.b #23	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00940000159099 #28	ENSGT00390000001827 #29	ENSGT00390000008295.b #31	ENSGT00940000157911 #32	ENSGT00510000048725 #33	ENSGT00940000160520 #34	ENSGT00390000003114.e.b.b.g #35	ENSGT00940000157880 #36	ENSGT00940000155488 #37	ENSGT00940000158391	ENSGT00940000157527
Elephant	MODERN SPECIES	348	CTDSPL (ENSLAFG00000006997)	ENSLAFG00000026278 #7	ENSLAFG00000024095	ENSLAFG00000001169 #7	GOLGA4 (ENSLAFG00000001167) #9	LRRFIP2 (ENSLAFG00000016834) #10	MLH1 (ENSLAFG00000021468) #12	EPM2AIP1 (ENSLAFG00000030494) #13	DCLK3 (ENSLAFG00000026255) #17	STAC (ENSLAFG00000014326) #18	ARPP21 (ENSLAFG00000005797) #19	ENSLAFG00000001141	ENSLAFG00000027912	ENSLAFG00000030550	CLASP2 (ENSLAFG00000000172) #21	ENSLAFG00000030783 #22	FBXL2 (ENSLAFG00000002357) #23	TMPPE (ENSLAFG00000011868)	GLB1 (ENSLAFG00000011863) #26	CCR4 (ENSLAFG00000001081) #27	TRIM71 (ENSLAFG00000026852) #28	CNOT10 (ENSLAFG00000012513) #29	DYNC1LI1 (ENSLAFG00000012623) #31	CMTM6 (ENSLAFG00000012617) #32	CMTM7 (ENSLAFG00000016543) #33	CMTM8 (ENSLAFG00000025679) #34	ENSLAFG00000013996 #35	OSBPL10 (ENSLAFG00000002340) #36	STT3B (ENSLAFG00000002337) #37	GADL1 (ENSLAFG00000003788)	TGFBR2 (ENSLAFG00000003785)
Hyrax	MODERN SPECIES	3952																UBP1 (ENSPCAG00000008237) #22	FBXL2 (ENSPCAG00000008152) #23
Afrotheria_a	ANCESTRAL SPECIES																	ENSGT00940000156148.l #22
Elephant	MODERN SPECIES	56	TRIM26 (ENSLAFG00000011121)	TRIM15 (ENSLAFG00000001203)	TRIM10 (ENSLAFG00000001199)	TRIM40 (ENSLAFG00000013364)	ENSLAFG00000012582	RNF39 (ENSLAFG00000026684)	PPP1R11 (ENSLAFG00000027660)	POLR1H (ENSLAFG00000012576)	ENSLAFG00000027525	MOG (ENSLAFG00000017461)	GABBR1 (ENSLAFG00000017450)	ENSLAFG00000028740	ENSLAFG00000032081	ENSLAFG00000032604	ENSLAFG00000006670	ENSLAFG00000029198 #22	ENSLAFG00000031929	ENSLAFG00000029181	UBD (ENSLAFG00000020621)	ENSLAFG00000030949	ENSLAFG00000020882	ENSLAFG00000032026	ENSLAFG00000027364	ENSLAFG00000021464	ENSLAFG00000030210	ENSLAFG00000030646	ENSLAFG00000030024	ENSLAFG00000032193	ENSLAFG00000029206	ENSLAFG00000029720	OR12D3 (ENSLAFG00000031131)
Tenrec	MODERN SPECIES	4680																UBP1 (ENSETEG00000016510) #22	FBXL2 (ENSETEG00000016506) #23
Marsupialia	ANCESTRAL SPECIES	60										ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22
Opossum	DUPLICATION
Opossum	MODERN SPECIES	5	TTC21A (ENSMODG00000013468)	ENSMODG00000021162	ENSMODG00000021163	ACAA1 (ENSMODG00000021165)	HERPUD2 (ENSMODG00000021166)	ENSMODG00000021167	MATCAP2 (ENSMODG00000021169)	ANLN (ENSMODG00000021170)	ENSMODG00000021171	ENSMODG00000027724	ENSMODG00000002226	ARPP21 (ENSMODG00000002309) #19	ENSMODG00000038986	ENSMODG00000002472	CLASP2 (ENSMODG00000002548) #21	ENSMODG00000002605 #22	AVL9 (ENSMODG00000021550)	KBTBD2 (ENSMODG00000021551)	FKBP9 (ENSMODG00000021555)	ENSMODG00000025514	NT5C3A (ENSMODG00000037427)	ENSMODG00000024029
Opossum	MODERN SPECIES	5	ATRIP (ENSMODG00000014362)	CCDC51 (ENSMODG00000047787)	PLXNB1 (ENSMODG00000014384)	ENSMODG00000047840	PLPPR1 (ENSMODG00000014394)	ENSMODG00000022961	ENSMODG00000014400	BAAT (ENSMODG00000014410)	ENSMODG00000047572	MRPL50 (ENSMODG00000022960)	ENSMODG00000014418	ENSMODG00000038083	RNF20 (ENSMODG00000014435)	ENSMODG00000014442	ENSMODG00000050335	ENSMODG00000014457 #22	ENSMODG00000013605	ENSMODG00000048085	ENSMODG00000048599	ENSMODG00000022958	ENSMODG00000029187	ENSMODG00000042401	ENSMODG00000014565	ENSMODG00000042821	KLF4 (ENSMODG00000014569)	RAD23B (ENSMODG00000014579)	ENSMODG00000039459	ZNF462 (ENSMODG00000014597)	TMEM38B (ENSMODG00000014644)	TAL2 (ENSMODG00000022957)	FKTN (ENSMODG00000014646)
Marsupialia_b	ANCESTRAL SPECIES	14	ENSGT00550000074921	ENSGT00390000004860	ENSGT00940000157238	ENSGT00940000160986	ENSGT00940000157444	ENSGT00940000159941	ENSGT00390000011897	ENSGT00390000010053	ENSGT00950000182952.D	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT01100000263551.b.b.b	ENSGT00390000003442.n	ENSGT00940000155380	ENSGT00940000159917	ENSGT01100000263525.b.b.b	ENSGT01100000263525.b.b.a	ENSGT00990000204321	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000161957	ENSGT00390000004199
Tasmanian devil	DUPLICATION
Tasmanian devil	MODERN SPECIES	2	EPB41 (ENSSHAG00000011604)	OPRD1 (ENSSHAG00000024576)	YTHDF2 (ENSSHAG00000009502)	GMEB1 (ENSSHAG00000009099)	TAF12 (ENSSHAG00000008563)	ENSSHAG00000030345	ENSSHAG00000008443	TRNAU1AP (ENSSHAG00000008108)	RCC1 (ENSSHAG00000027903)	PHACTR4 (ENSSHAG00000006497)	MED18 (ENSSHAG00000031976)	SESN2 (ENSSHAG00000004785)	ENSSHAG00000022171	DNAJC8 (ENSSHAG00000003717)	PTAFR (ENSSHAG00000026787)	ENSSHAG00000029212 #22	EYA3 (ENSSHAG00000027000)	XKR8 (ENSSHAG00000026927)	SMPDL3B (ENSSHAG00000015331)	RPA2 (ENSSHAG00000015255)	THEMIS2 (ENSSHAG00000015133)	PPP1R8 (ENSSHAG00000024313)	FAM76A (ENSSHAG00000022341)	FGR (ENSSHAG00000001546)	WASF2 (ENSSHAG00000004886)	GPR3 (ENSSHAG00000032210)	CD164L2 (ENSSHAG00000003127)	SYTL1 (ENSSHAG00000021748)	TMEM222 (ENSSHAG00000025224)	WDTC1 (ENSSHAG00000001544)	SLC9A1 (ENSSHAG00000021244)
Tasmanian devil	MODERN SPECIES		ENSSHAG00000000237	ENSSHAG00000028866	ENSSHAG00000029866	OGN (ENSSHAG00000020525)	OMD (ENSSHAG00000026198)	ASPN (ENSSHAG00000000510)	ENSSHAG00000000081	ENSSHAG00000031896	ENSSHAG00000024444	ENSSHAG00000030691 #17	STAC (ENSSHAG00000026743) #18	ARPP21 (ENSSHAG00000027378) #19	ENSSHAG00000000968 #20	ENSSHAG00000026693 #21	ENSSHAG00000028172 #21	ENSSHAG00000005805 #22	ENSSHAG00000025092	ENSSHAG00000028392	ENSSHAG00000021686	GNGT1 (ENSSHAG00000028716)	ENSSHAG00000031526	ENSSHAG00000023066	ENSSHAG00000020702	ENSSHAG00000031702	ENSSHAG00000004011	ENSSHAG00000030232	ENSSHAG00000005767	ENSSHAG00000023991	ENSSHAG00000027370	ENSSHAG00000025494	ENSSHAG00000028316
Diprotodontia	ANCESTRAL SPECIES	61	ENSGT00550000074921	ENSGT00390000004860	ENSGT00940000157238	ENSGT00940000160986	ENSGT00940000157444	ENSGT00940000159941	ENSGT00390000011897	ENSGT00390000010053	ENSGT00950000182952.D	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT01100000263551.b.b.b	ENSGT00390000003442.n	ENSGT00940000155380	ENSGT00940000159917	ENSGT01100000263525.b.b.b	ENSGT00990000204321	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000161957	ENSGT00390000004199
Wallaby	MODERN SPECIES	5931																UBP1 (ENSMEUG00000013709) #22
Diprotodontia_a	ANCESTRAL SPECIES	10	ENSGT00390000004860	ENSGT00940000157238	ENSGT00940000160986	ENSGT00940000157444	ENSGT00940000159941	ENSGT00390000011897	ENSGT00390000010053	ENSGT00950000182952.D	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000160453	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT01100000263551.b.b.b	ENSGT00390000003442.n.a	ENSGT00940000155380	ENSGT00940000159917	ENSGT01100000263525.b.b.b	ENSGT00990000204321	ENSGT00940000164410	ENSGT00940000163414	ENSGT00940000161957	ENSGT00390000004199
Common wonbat	MODERN SPECIES	1053	OGN (ENSVURG00010018080)	OMD (ENSVURG00010018083)	ASPN (ENSVURG00010018088)	ECM2 (ENSVURG00010018095)	ENSVURG00010018098	IPPK (ENSVURG00010018105)	ENSVURG00010018117	TRANK1 (ENSVURG00010018135) #15	DCLK3 (ENSVURG00010018148) #17	STAC (ENSVURG00010018159) #18	ENSVURG00010018205 #19	ENSVURG00010018212 #19	TAPBPL (ENSVURG00010018282)	ENSVURG00010018288 #20	CLASP2 (ENSVURG00010018322) #21	UBP1 (ENSVURG00010018427) #22	HEPACAM2 (ENSVURG00010018479)	ENSVURG00010018485	ENSVURG00010018527	CALCR (ENSVURG00010019257)	TFPI2 (ENSVURG00010019266)	GNGT1 (ENSVURG00010019270)	ENSVURG00010019273	ENSVURG00010019282	ENSVURG00010019288	CHP2 (ENSVURG00010019298)	ENSVURG00010019305	ENSVURG00010019320	ENSVURG00010019328	ENSVURG00010019332
koala	DUPLICATION
koala	MODERN SPECIES	346													ENSPCIG00000025598	ENSPCIG00000025595 #20	CLASP2 (ENSPCIG00000013269) #21	UBP1 (ENSPCIG00000013186) #22	HEPACAM2 (ENSPCIG00000013185)	VPS50 (ENSPCIG00000013184)	CALCR (ENSPCIG00000013173)	ENSPCIG00000011196	GNGT1 (ENSPCIG00000011200)	ENSPCIG00000011201	ENSPCIG00000011205	ENSPCIG00000025435	ENSPCIG00000014207	ENSPCIG00000010065	ENSPCIG00000032447
koala	MODERN SPECIES	134														ENSPCIG00000029798	ENSPCIG00000029801	ENSPCIG00000016613 #22	ENSPCIG00000027415	SLITRK5 (ENSPCIG00000013877)	ENSPCIG00000009125	ENSPCIG00000005198	ENSPCIG00000001015	SLITRK6 (ENSPCIG00000001037)	ENSPCIG00000032847
Platypus	MODERN SPECIES	13	GPR141 (ENSOANG00000039845)	ELMO1 (ENSOANG00000038864)	AOAH (ENSOANG00000042679)	ANLN (ENSOANG00000001544)	MATCAP2 (ENSOANG00000041601)	SMOC2 (ENSOANG00000002822)	LRRFIP2 (ENSOANG00000015304) #10	MLH1 (ENSOANG00000015305) #12	TRANK1 (ENSOANG00000015307) #15	DCLK3 (ENSOANG00000039678) #17	STAC (ENSOANG00000015309) #18	ENSOANG00000001369 #19	ENSOANG00000042489 #19	ENSOANG00000008307 #20	CLASP2 (ENSOANG00000008308) #21	UBP1 (ENSOANG00000008309) #22	FBXL2 (ENSOANG00000008310) #23	ENSOANG00000008311 #24	CRTAP (ENSOANG00000021210) #25	GLB1 (ENSOANG00000012154) #26	CCR4 (ENSOANG00000012155) #27	CX3CR1 (ENSOANG00000003978) ##27	CCR8 (ENSOANG00000038830) ##27	ENSOANG00000044574	ENSOANG00000011995	ENSOANG00000042498	ENSOANG00000002415	UBE2C (ENSOANG00000031758)	TNNC2 (ENSOANG00000046999)	ENSOANG00000048231	ENSOANG00000045670
Sauria	ANCESTRAL SPECIES		ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00960000192712	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B ##27	ENSGT00940000164532	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239
Lepidosauria	ANCESTRAL SPECIES	5	ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00960000192712	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239	ENSGT00390000003571	ENSGT00940000155697.A
Episquamata	ANCESTRAL SPECIES	5	ENSGT00390000001455	ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239	ENSGT00390000003571	ENSGT00940000155697.A
Laterata	ANCESTRAL SPECIES	39	ENSGT00390000001455	ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b
Common wall lizard	MODERN SPECIES	3	ITPRID1 (ENSPMRG00000018323)	NEUROD6 (ENSPMRG00000018349)	ITGA9 (ENSPMRG00000018361) #7	GOLGA4 (ENSPMRG00000018400) #9	LRRFIP2 (ENSPMRG00000018496) #10	MLH1 (ENSPMRG00000018516) #12	TRANK1 (ENSPMRG00000018528) #15	ENSPMRG00000018540 #17	ENSPMRG00000018544 #17	STAC (ENSPMRG00000018550) #18	ARPP21 (ENSPMRG00000018567) #19	ENSPMRG00000018600	ENSPMRG00000018608	ENSPMRG00000018622	CLASP2 (ENSPMRG00000018710) #21	UBP1 (ENSPMRG00000019202) #22	FBXL2 (ENSPMRG00000019221) #23	SUSD5 (ENSPMRG00000019231) #24	CRTAP (ENSPMRG00000019235) #25	GLB1 (ENSPMRG00000019238) #26	TMPPE (ENSPMRG00000019263)	ENSPMRG00000019270 #27	ENSPMRG00000019277	ENSPMRG00000015020	ENSPMRG00000015026	CX3CR1 (ENSPMRG00000015041) ##27	ENSPMRG00000015046 #27	ENSPMRG00000015047	FKBP9 (ENSPMRG00000015053)	NT5C3A (ENSPMRG00000015066)	BBS9 (ENSPMRG00000015093)
Argentine black and white tegu	MODERN SPECIES	89				ENSSMRG00000006168	NEUROD6 (ENSSMRG00000006145)	ITGA9 (ENSSMRG00000006135) #7	GOLGA4 (ENSSMRG00000006108) #9	LRRFIP2 (ENSSMRG00000006092) #10	MLH1 (ENSSMRG00000006084) #12	TRANK1 (ENSSMRG00000006045) #15	DCLK3 (ENSSMRG00000006041) #17	STAC (ENSSMRG00000006031) #18	ARPP21 (ENSSMRG00000005842) #19	ENSSMRG00000005820 #20	CLASP2 (ENSSMRG00000005811) #21	UBP1 (ENSSMRG00000005800) #22	ENSSMRG00000005799	MYRIP (ENSSMRG00000005781)
Toxicofera	ANCESTRAL SPECIES	4	ENSGT00390000001455	ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00990000210357	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT00940000164532	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239	ENSGT00390000003571	ENSGT00940000155697.A
Elapidae	ANCESTRAL SPECIES	5	ENSGT00500000045246	ENSGT00940000156069	ENSGT00390000010255.h	ENSGT00390000001455	ENSGT00940000155331.A	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139.q #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00950000183092.b.b #18	ENSGT00940000163083 #20	ENSGT00940000155574.C.v.b #21	ENSGT01100000263710	ENSGT00940000155574.C.v.a #21	ENSGT00940000156148 #22	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00940000160239	ENSGT00390000003571	ENSGT00940000155697.A	ENSGT00940000156541	ENSGT00940000155471.d.g.b	ENSGT00390000001296	ENSGT00390000012690	ENSGT00940000155721	ENSGT00950000183130.C
Indian cobra	MODERN SPECIES	337	ENSNNAG00000014864	ENSNNAG00000014848	ENSNNAG00000014839	NEUROD6 (ENSNNAG00000014830)	ENSNNAG00000014819	ITGA9 (ENSNNAG00000014539) #7	GOLGA4 (ENSNNAG00000014484) #9	LRRFIP2 (ENSNNAG00000014146) #10	ENSNNAG00000014092 #12	ENSNNAG00000014062 #12	STAC (ENSNNAG00000014003) #18	ENSNNAG00000013988	ENSNNAG00000013837 #20	ENSNNAG00000013814	CLASP2 (ENSNNAG00000011260) #21	UBP1 (ENSNNAG00000011011) #22	CRTAP (ENSNNAG00000010978) #25	GLB1 (ENSNNAG00000010897) #26	CCR4 (ENSNNAG00000010865) #27	ENSNNAG00000010810	ENSNNAG00000010776	ENSNNAG00000010756	EIF1B (ENSNNAG00000010727)	ENSNNAG00000010695	CCK (ENSNNAG00000010680)	TRAK1 (ENSNNAG00000009926)	ENSNNAG00000009877	ENSNNAG00000009783	KIAA1143 (ENSNNAG00000009751)	ENSNNAG00000009720	ZDHHC3 (ENSNNAG00000009686)
Elapidae_a	ANCESTRAL SPECIES	84														ENSGT01100000263710	ENSGT00940000155574.C.v.a #21	ENSGT00940000156148 #22	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000003571	ENSGT00940000155697.A	ENSGT00940000155471.d.g.b	ENSGT00390000001296	ENSGT00390000012690	ENSGT00940000155721	ENSGT00950000183130.C	ENSGT00950000183186.B.b	ENSGT00390000010209	ENSGT00390000009719
Acanthophiinae	ANCESTRAL SPECIES	79														ENSGT01100000263710	ENSGT00940000155574.C.v.a #21	ENSGT00940000156148 #22	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000003571	ENSGT00940000155697.A	ENSGT00940000155471.d.g.b	ENSGT00390000001296	ENSGT00390000012690	ENSGT00940000155721	ENSGT00950000183130.C	ENSGT00950000183186.B.b	ENSGT00390000010209	ENSGT00390000009719
Eastern brown snake	MODERN SPECIES	113												ENSPTXG00000018743	STAC (ENSPTXG00000010792) #18	ENSPTXG00000010793	CLASP2 (ENSPTXG00000010837) #21	UBP1 (ENSPTXG00000014713) #22	CRTAP (ENSPTXG00000014714) #25	GLB1 (ENSPTXG00000014715) #26	MYRIP (ENSPTXG00000014716)	ENSPTXG00000014718	ENSPTXG00000014719
Mainland tiger snake	MODERN SPECIES	102															ENSNSUG00000006417 #21	UBP1 (ENSNSUG00000006421) #22	CRTAP (ENSNSUG00000006671) #25	ENSNSUG00000006673	GLB1 (ENSNSUG00000006674) #26	ENSNSUG00000006676	ENSNSUG00000006683	ENSNSUG00000006684	CCK (ENSNSUG00000006685)	TRAK1 (ENSNSUG00000006690)	ENSNSUG00000006691 ##13	ENSNSUG00000006692	KIAA1143 (ENSNSUG00000006693)	TMEM42 (ENSNSUG00000006694)	ZDHHC3 (ENSNSUG00000006695)	EXOSC7 (ENSNSUG00000006697)	ENSNSUG00000006707
Blue-lipped sea krait	MODERN SPECIES	200																UBP1 (ENSLLTG00000018373) #22
Lizard	MODERN SPECIES	938												ENSACAG00000037887	ENSACAG00000039223	ENSACAG00000013370 #20	CLASP2 (ENSACAG00000013490) #21	UBP1 (ENSACAG00000013565) #22	FBXL2 (ENSACAG00000013666) #23	ENSACAG00000036764	CRTAP (ENSACAG00000037793) #25	GLB1 (ENSACAG00000013765) #26	ENSACAG00000040933	CCR4 (ENSACAG00000014037) #27	ENSACAG00000014040 ##27	ENSACAG00000014043	ENSACAG00000041892	ENSACAG00000014069	ENSACAG00000021130 ##27	ENSACAG00000014097 ##27	ENSACAG00000028320 ##27	XCR1 (ENSACAG00000014112)	CXCR6 (ENSACAG00000014156)
tuatara	MODERN SPECIES	446														ENSSPUG00000009862 #20	CLASP2 (ENSSPUG00000009434) #21	UBP1 (ENSSPUG00000009330) #22	FBXL2 (ENSSPUG00000009300) #23	CRTAP (ENSSPUG00000009290) #25	GLB1 (ENSSPUG00000009246) #26	CCR4 (ENSSPUG00000009241) #27	CX3CR1 (ENSSPUG00000009236) ##27
Archelosauria	ANCESTRAL SPECIES	6	ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00960000192712	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B.c ##27	ENSGT00940000164532	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239
Archosauria	ANCESTRAL SPECIES		ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00960000192712	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B.c ##27	ENSGT00940000164532	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239
Aves	ANCESTRAL SPECIES	5	ENSGT00390000001455	ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B.c ##27	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239	ENSGT00390000003571
Neognathae	ANCESTRAL SPECIES		ENSGT00940000155994	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000177252	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B.c ##27	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239	ENSGT00390000003571
Galloanserae	ANCESTRAL SPECIES		ENSGT00390000008427	ENSGT00940000155994	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B.c ##27	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239	ENSGT00390000003571
Anatidae	ANCESTRAL SPECIES	92											ENSGT00390000017432	ENSGT00950000183170.b.a	ENSGT00940000153875.c	ENSGT01100000263710	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B.c ##27	ENSGT00550000075117	ENSGT00950000183099.u.b	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239	ENSGT00390000003571
Pink-footed goose	MODERN SPECIES	297												TRIP13 (ENSABRG00000017917)	BRD9 (ENSABRG00000017906)	TPPP (ENSABRG00000017899)	CLASP2 (ENSABRG00000016859) #21	UBP1 (ENSABRG00000016467) #22	FBXL2 (ENSABRG00000016264) #23	SUSD5 (ENSABRG00000016252) #24	CRTAP (ENSABRG00000016246) #25	CCR4 (ENSABRG00000016239) #27	CX3CR1 (ENSABRG00000016234) ##27	GLB1 (ENSABRG00000016216) #26	ENSABRG00000016211 ##27	ENSABRG00000016208 ##27	SLC25A38 (ENSABRG00000016206)
Duck	MODERN SPECIES	10	SMIM13 (ENSAPLG00000023021)	NEDD9 (ENSAPLG00000001295)	ENSAPLG00000001290	ENSAPLG00000028781	ENSAPLG00000011790 #20	ARPP21 (ENSAPLG00000004808) #19	STAC (ENSAPLG00000010417) #18	DCLK3 (ENSAPLG00000010406) #17	TRANK1 (ENSAPLG00000010356) #15	TRIP13 (ENSAPLG00000010065)	ENSAPLG00000018632	ENSAPLG00000010017	TPPP (ENSAPLG00000009901)	ENSAPLG00000017452	CLASP2 (ENSAPLG00000001903) #21	UBP1 (ENSAPLG00000001472) #22	FBXL2 (ENSAPLG00000001346) #23	ENSAPLG00000020944	SUSD5 (ENSAPLG00000001335) #24	CRTAP (ENSAPLG00000001236) #25	TMPPE (ENSAPLG00000001209)	GLB1 (ENSAPLG00000001019) #26	CCR4 (ENSAPLG00000001205) #27	EIF1B (ENSAPLG00000001143)	ENSAPLG00000023148	MYRIP (ENSAPLG00000016281)	ENSAPLG00000016788	ENSAPLG00000015724	SLC25A38 (ENSAPLG00000015901)	ENSAPLG00000020928	CX3CR1 (ENSAPLG00000001393) ##27
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00390000008427	ENSGT00940000155994	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B.c ##27	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239	ENSGT00390000003571
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00390000008427	ENSGT00940000155994	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B.c ##27	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239	ENSGT00390000003571
Turkey	MODERN SPECIES	26	AOAH (ENSMGAG00000011987)	ELMO1 (ENSMGAG00000011976)	ENSMGAG00000015889	ENSMGAG00000016152	NME8 (ENSMGAG00000011969)	SFRP4 (ENSMGAG00000011966)	EPDR1 (ENSMGAG00000011962)	STARD3NL (ENSMGAG00000011954)	MLH1 (ENSMGAG00000011939) #12	TRANK1 (ENSMGAG00000011934) #15	DCLK3 (ENSMGAG00000011929) #17	STAC (ENSMGAG00000011923) #18	ARPP21 (ENSMGAG00000011901) #19	ENSMGAG00000011875 #20	CLASP2 (ENSMGAG00000011838) #21	UBP1 (ENSMGAG00000011814) #22	FBXL2 (ENSMGAG00000011795) #23	SUSD5 (ENSMGAG00000011793) #24	CRTAP (ENSMGAG00000011787) #25	GLB1 (ENSMGAG00000011775) #26	CCR4 (ENSMGAG00000016137) #27	ENSMGAG00000016133 ##27	ENSMGAG00000011774 ##27	SLC25A38 (ENSMGAG00000011769)	ENSMGAG00000011754	ENSMGAG00000011747	MYRIP (ENSMGAG00000011737)	ENSMGAG00000011736	ENSMGAG00000016130	EIF1B (ENSMGAG00000011733)	CCK (ENSMGAG00000022911)
Chicken	MODERN SPECIES	11	ELMO1 (ENSGALG00010016729)	GPR141 (ENSGALG00010016682)	ENSGALG00010016665	NME9 (ENSGALG00010015943)	SFRP4 (ENSGALG00010016100)	EPDR1 (ENSGALG00010016059)	STARD3NL (ENSGALG00010016137)	MLH1 (ENSGALG00010016109) #12	TRANK1 (ENSGALG00010016655) #15	DCLK3 (ENSGALG00010018405) #17	STAC (ENSGALG00010018391) #18	ARPP21 (ENSGALG00010018378) #19	ENSGALG00010019691	PDCD6IP (ENSGALG00010018338) #20	CLASP2 (ENSGALG00010018315) #21	UBP1 (ENSGALG00010018188) #22	FBXL2 (ENSGALG00010018157) #23	SUSD5 (ENSGALG00010017100) #24	CRTAP (ENSGALG00010017089) #25	TMPPE (ENSGALG00010017063)	GLB1 (ENSGALG00010017045) #26	CCR4 (ENSGALG00010017022) #27	CX3CR1 (ENSGALG00010017004) ##27	CCR8 (ENSGALG00010016948) ##27	SLC25A38 (ENSGALG00010016934)	RPSAP58 (ENSGALG00010016040)	TMC2 (ENSGALG00010015934)	MYRIP (ENSGALG00010015919)	ENSGALG00010015863	EIF1B (ENSGALG00010016526)	CCK (ENSGALG00010016489)
Japanese quail	MODERN SPECIES	11	ENSCJPG00005014784	ENSCJPG00005014782	GPR141 (ENSCJPG00005014780)	ENSCJPG00005014779	NME8 (ENSCJPG00005014778)	SFRP4 (ENSCJPG00005014777)	EPDR1 (ENSCJPG00005014776)	STARD3NL (ENSCJPG00005014775)	MLH1 (ENSCJPG00005014774) #12	TRANK1 (ENSCJPG00005014773) #15	DCLK3 (ENSCJPG00005014771) #17	STAC (ENSCJPG00005014768) #18	ARPP21 (ENSCJPG00005014766) #19	ENSCJPG00005014758 #20	CLASP2 (ENSCJPG00005005763) #21	UBP1 (ENSCJPG00005005738) #22	FBXL2 (ENSCJPG00005005598) #23	SUSD5 (ENSCJPG00005005569) #24	CRTAP (ENSCJPG00005005564) #25	TMPPE (ENSCJPG00005005561)	GLB1 (ENSCJPG00005004538) #26	CCR4 (ENSCJPG00005004537) #27	CX3CR1 (ENSCJPG00005004535) ##27	ENSCJPG00005004532 ##27	SLC25A38 (ENSCJPG00005004530)	ENSCJPG00005004526	TMC2 (ENSCJPG00005004506)	ENSCJPG00005004481	ENSCJPG00005004480	ENSCJPG00005004479	EIF1B (ENSCJPG00005004478)
Neognathae_b	ANCESTRAL SPECIES	3	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00800000124177 #12	ENSGT00990000210629	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000177252	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25
Passeriformes	ANCESTRAL SPECIES		ENSGT00940000155994	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00800000124177 #12	ENSGT00990000210629	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00940000157738	ENSGT00940000155013	ENSGT00940000154774	ENSGT00940000154516.b	ENSGT00390000016016.A	ENSGT00390000001319	ENSGT00940000155450	ENSGT01040000241072	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT00440000033985
Great tit	MODERN SPECIES	11	AOAH (ENSPMJG00000010976)	ELMO1 (ENSPMJG00000010996)	GPR141 (ENSPMJG00000011845)	ENSPMJG00000011847	NME8 (ENSPMJG00000011848)	SFRP4 (ENSPMJG00000011849)	EPDR1 (ENSPMJG00000011850)	STARD3NL (ENSPMJG00000011851)	MLH1 (ENSPMJG00000011852) #12	TRANK1 (ENSPMJG00000011854) #15	DCLK3 (ENSPMJG00000011855) #17	STAC (ENSPMJG00000011856) #18	ARPP21 (ENSPMJG00000011857) #19	ENSPMJG00000011862 #20	CLASP2 (ENSPMJG00000011882) #21	UBP1 (ENSPMJG00000018015) #22	FBXL2 (ENSPMJG00000018016) #23	SUSD5 (ENSPMJG00000018017) #24	CRTAP (ENSPMJG00000018018) #25	PDIA4 (ENSPMJG00000018019)	EZH2 (ENSPMJG00000018023)	CUL1 (ENSPMJG00000018024)	CNTNAP2 (ENSPMJG00000018026)	TPK1 (ENSPMJG00000018028)	SEC61G (ENSPMJG00000018029)	EGFR (ENSPMJG00000018030)	LANCL2 (ENSPMJG00000018031)	VOPP1 (ENSPMJG00000018032)	BLVRA (ENSPMJG00000018033)	HECW1 (ENSPMJG00000018034)	STK17A (ENSPMJG00000018035)
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00940000155994	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00800000124177 #12	ENSGT00990000210629	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00940000157738	ENSGT00940000155013	ENSGT00940000154774	ENSGT00940000154516.b	ENSGT00390000016016.A	ENSGT00390000001319	ENSGT00940000155450	ENSGT01040000241072	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT01030000235253.d.b
Passeriformes_g	ANCESTRAL SPECIES	6	ENSGT00940000155994	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00800000124177 #12	ENSGT00990000210629	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00940000157738	ENSGT00940000155013	ENSGT00940000154774	ENSGT00940000154516.b	ENSGT00390000016016.A	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT01030000235253.d.b	ENSGT00440000033985
Medium ground finch	MODERN SPECIES	67		RCN1 (ENSGFOG00000012757)	ENSGFOG00000012755	WT1 (ENSGFOG00000012744)	EIF3M (ENSGFOG00000012731)	EPDR1 (ENSGFOG00000012721)	STARD3NL (ENSGFOG00000012713)	MLH1 (ENSGFOG00000012634) #12	TRANK1 (ENSGFOG00000012619) #15	DCLK3 (ENSGFOG00000012614) #17	STAC (ENSGFOG00000012606) #18	ENSGFOG00000012600	ARPP21 (ENSGFOG00000012570) #19	ENSGFOG00000012563 #20	CLASP2 (ENSGFOG00000012482) #21	UBP1 (ENSGFOG00000012440) #22	FBXL2 (ENSGFOG00000012436) #23	SUSD5 (ENSGFOG00000012435) #24	CRTAP (ENSGFOG00000012409) #25	PDIA4 (ENSGFOG00000012396)	EZH2 (ENSGFOG00000012383)	CUL1 (ENSGFOG00000012370)	CNTNAP2 (ENSGFOG00000012219)	TPK1 (ENSGFOG00000012174)	SEC61G (ENSGFOG00000012170)
Passeroidea	ANCESTRAL SPECIES	6	ENSGT00940000155994	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00800000124177 #12	ENSGT00990000210629	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00940000157738	ENSGT00940000155013	ENSGT00940000154774	ENSGT00940000154516.b	ENSGT00390000016016.A	ENSGT00390000001319	ENSGT00940000155450	ENSGT00530000063186.b.a	ENSGT00390000015821	ENSGT00390000011072	ENSGT01030000235253.d.b	ENSGT00440000033985
Zebra finch	MODERN SPECIES	12	ELMO1 (ENSTGUG00000005533)	GPR141 (ENSTGUG00000005605)	ENSTGUG00000021642	NME8 (ENSTGUG00000005610)	SFRP4 (ENSTGUG00000028454)	EPDR1 (ENSTGUG00000025037)	STARD3NL (ENSTGUG00000005634)	MLH1 (ENSTGUG00000005654) #12	ENSTGUG00000020973	TRANK1 (ENSTGUG00000005694) #15	DCLK3 (ENSTGUG00000027434) #17	STAC (ENSTGUG00000001694) #18	ARPP21 (ENSTGUG00000001697) #19	ENSTGUG00000001714 #20	CLASP2 (ENSTGUG00000001731) #21	UBP1 (ENSTGUG00000001752) #22	FBXL2 (ENSTGUG00000001755) #23	SUSD5 (ENSTGUG00000001761) #24	CRTAP (ENSTGUG00000022421) #25	PDIA4 (ENSTGUG00000001769)	EZH2 (ENSTGUG00000001770)	CUL1 (ENSTGUG00000001790)	CNTNAP2 (ENSTGUG00000001794)	TPK1 (ENSTGUG00000001803)	SEC61G (ENSTGUG00000021195)	EGFR (ENSTGUG00000001806)	LANCL2 (ENSTGUG00000020824)	VOPP1 (ENSTGUG00000001812)	BLVRA (ENSTGUG00000001814)	ENSTGUG00000021649	COA1 (ENSTGUG00000022951)
Common canary	MODERN SPECIES	24	RECK (ENSSCAG00000015778)	TGFBR1 (ENSSCAG00000015773)	COL15A1 (ENSSCAG00000015735)	TRIP13 (ENSSCAG00000015717)	BRD9 (ENSSCAG00000015689)	TPPP (ENSSCAG00000015680)	SLC9A3 (ENSSCAG00000015674)	LRRC14B (ENSSCAG00000015670)	RAMP3 (ENSSCAG00000015668)	ADCY1 (ENSSCAG00000015661)	IGFBP1 (ENSSCAG00000015655)	IGFBP3 (ENSSCAG00000015653)	TNS3 (ENSSCAG00000015645)	HUS1 (ENSSCAG00000015637)	CLASP2 (ENSSCAG00000015626) #21	UBP1 (ENSSCAG00000015619) #22	FBXL2 (ENSSCAG00000015614) #23	SUSD5 (ENSSCAG00000015611) #24	CRTAP (ENSSCAG00000015609) #25	PDIA4 (ENSSCAG00000015603)	EZH2 (ENSSCAG00000015590)	CUL1 (ENSSCAG00000015578)	CNTNAP2 (ENSSCAG00000015566)	TPK1 (ENSSCAG00000015559)	SEC61G (ENSSCAG00000015554)	EGFR (ENSSCAG00000015542)	LANCL2 (ENSSCAG00000015537)	VOPP1 (ENSSCAG00000015531)	BLVRA (ENSSCAG00000015527)	ENSSCAG00000015524	COA1 (ENSSCAG00000015519)
Flycatcher	MODERN SPECIES	11	VOPP1 (ENSFALG00000026362)	LANCL2 (ENSFALG00000026759)	ENSFALG00000024233	EGFR (ENSFALG00000004982)	SEC61G (ENSFALG00000023868)	TPK1 (ENSFALG00000028596)	ENSFALG00000027812	CNTNAP2 (ENSFALG00000010327)	CUL1 (ENSFALG00000010318)	EZH2 (ENSFALG00000010310)	PDIA4 (ENSFALG00000010289)	ENSFALG00000005162 #25	ENSFALG00000005152 #24	ENSFALG00000005126 #20	CLASP2 (ENSFALG00000005035) #21	ENSFALG00000004962 #22	FBXL2 (ENSFALG00000004940) #23	STAC (ENSFALG00000002881) #18	DCLK3 (ENSFALG00000002880) #17	TRANK1 (ENSFALG00000002875) #15	MLH1 (ENSFALG00000002856) #12	STARD3NL (ENSFALG00000002843)	EPDR1 (ENSFALG00000022868)	SFRP4 (ENSFALG00000002829)	NME8 (ENSFALG00000002824)	GPR141 (ENSFALG00000002820)	ENSFALG00000027025	ENSFALG00000025526	ANLN (ENSFALG00000002803)	AOAH (ENSFALG00000002810)	MATCAP2 (ENSFALG00000023520)
Neognathae_c	ANCESTRAL SPECIES	1	ENSGT01030000234518.E.c.a	ENSGT01030000234518.E.c.b	ENSGT00940000161182	ENSGT00940000160766	ENSGT00940000161910	ENSGT00940000155476	ENSGT00800000124177 #12	ENSGT00990000210629	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000177252	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25
Golden eagle	MODERN SPECIES	19	ULK4 (ENSACCG00020002310)	TRAK1 (ENSACCG00020002075)	CCK (ENSACCG00020002022)	EIF1B (ENSACCG00020001996)	ENSACCG00020001986	MYRIP (ENSACCG00020001950)	TMC2 (ENSACCG00020001898)	ENSACCG00020001848	SLC25A38 (ENSACCG00020001832)	ENSACCG00020001816 ##27	CX3CR1 (ENSACCG00020001802) ##27	CCR4 (ENSACCG00020001796) #27	GLB1 (ENSACCG00020001779) #26	ENSACCG00020001763 #20	CLASP2 (ENSACCG00020001539) #21	UBP1 (ENSACCG00020001350) #22	FBXL2 (ENSACCG00020001304) #23	SUSD5 (ENSACCG00020001291) #24	CRTAP (ENSACCG00020001274) #25	ARPP21 (ENSACCG00020001165) #19	STAC (ENSACCG00020001125) #18	DCLK3 (ENSACCG00020001107) #17	TRANK1 (ENSACCG00020001050) #15	ENSACCG00020001002	MLH1 (ENSACCG00020000981) #12	STARD3NL (ENSACCG00020000958)	EPDR1 (ENSACCG00020000943)	SFRP4 (ENSACCG00020000928)	NME8 (ENSACCG00020000909)	ENSACCG00020000888	GPR141 (ENSACCG00020000874)
Kakapo	MODERN SPECIES		ENSSHBG00005017344	ELMO1 (ENSSHBG00005017368)	ENSSHBG00005017986	NME8 (ENSSHBG00005017988)	SFRP4 (ENSSHBG00005017991)	EPDR1 (ENSSHBG00005017995)	STARD3NL (ENSSHBG00005017997)	MLH1 (ENSSHBG00005018021) #12	TRANK1 (ENSSHBG00005018069) #15	DCLK3 (ENSSHBG00005018075) #17	STAC (ENSSHBG00005018081) #18	ARPP21 (ENSSHBG00005018086) #19	ENSSHBG00005018097 #20	ENSSHBG00005018099	CLASP2 (ENSSHBG00005018101) #21	UBP1 (ENSSHBG00005018105) #22	FBXL2 (ENSSHBG00005018107) #23	SUSD5 (ENSSHBG00005018111) #24	CRTAP (ENSSHBG00005018115) #25	ZNRF2 (ENSSHBG00005018118)	NOD1 (ENSSHBG00005018121)	GGCT (ENSSHBG00005018124)
African ostrich	MODERN SPECIES	770	LSM5 (ENSSCUG00000015401)	PDE1C (ENSSCUG00000015427)	PPP1R17 (ENSSCUG00000015449)	ITPRID1 (ENSSCUG00000015453)	NEUROD6 (ENSSCUG00000015459)	ITGA9 (ENSSCUG00000015462) #7	GOLGA4 (ENSSCUG00000015470) #9	LRRFIP2 (ENSSCUG00000015485) #10	MLH1 (ENSSCUG00000015497) #12	TRANK1 (ENSSCUG00000015509) #15	DCLK3 (ENSSCUG00000015516) #17	STAC (ENSSCUG00000015519) #18	ARPP21 (ENSSCUG00000015529) #19	ENSSCUG00000015591 #20	CLASP2 (ENSSCUG00000015637) #21	UBP1 (ENSSCUG00000015684) #22	FBXL2 (ENSSCUG00000015696) #23	SUSD5 (ENSSCUG00000015702) #24	CRTAP (ENSSCUG00000015704) #25	TMPPE (ENSSCUG00000015707)	GLB1 (ENSSCUG00000015708) #26	CCR4 (ENSSCUG00000015711) #27	CX3CR1 (ENSSCUG00000015713) ##27
Australian saltwater crocodile	MODERN SPECIES		PPP1R17 (ENSCPRG00005009929)	ITPRID1 (ENSCPRG00005009927)	NEUROD6 (ENSCPRG00005009885)	ITGA9 (ENSCPRG00005009875) #7	GOLGA4 (ENSCPRG00005009655) #9	LRRFIP2 (ENSCPRG00005009593) #10	MLH1 (ENSCPRG00005009455) #12	TRANK1 (ENSCPRG00005009411) #15	DCLK3 (ENSCPRG00005009401) #17	STAC (ENSCPRG00005009362) #18	ENSCPRG00005009333	ARPP21 (ENSCPRG00005009322) #19	ENSCPRG00005009266	ENSCPRG00005009242 #20	CLASP2 (ENSCPRG00005009194) #21	UBP1 (ENSCPRG00005008890) #22	ENSCPRG00005008864 #23	ENSCPRG00005008862 #23	SUSD5 (ENSCPRG00005008813) #24	CRTAP (ENSCPRG00005008807) #25	GLB1 (ENSCPRG00005008799) #26	CCR4 (ENSCPRG00005008797) #27	CX3CR1 (ENSCPRG00005008767) ##27	ENSCPRG00005008765 ##27	ENSCPRG00005008764	SLC25A38 (ENSCPRG00005008761)	ENSCPRG00005008756	TMC2 (ENSCPRG00005008752)	MYRIP (ENSCPRG00005008721)	ENSCPRG00005008684	EIF1B (ENSCPRG00005008683)
Cryptodira	ANCESTRAL SPECIES	4	ENSGT00390000009586	ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00390000010260	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B.c ##27	ENSGT00940000164532	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239
Testudinoidea	ANCESTRAL SPECIES	8	ENSGT00390000001455	ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B.c ##27	ENSGT00940000164532	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239	ENSGT00390000003571
Testudinidae	ANCESTRAL SPECIES	1	ENSGT00390000001455	ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B.c ##27	ENSGT00940000164532	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239	ENSGT00390000003571
Abingdon island giant tortoise	MODERN SPECIES	2059											ARPP21 (ENSCABG00000022817) #19	ENSCABG00000022815	ENSCABG00000022812	ENSCABG00000022810 #20	CLASP2 (ENSCABG00000022002) #21	UBP1 (ENSCABG00000021855) #22	FBXL2 (ENSCABG00000021853) #23	SUSD5 (ENSCABG00000021852) #24	CRTAP (ENSCABG00000021851) #25
Goode s thornscrub tortoise	MODERN SPECIES	11	ENSGEVG00005008364	PDE1C (ENSGEVG00005008315)	PPP1R17 (ENSGEVG00005008284)	ITPRID1 (ENSGEVG00005008238)	NEUROD6 (ENSGEVG00005008226)	ITGA9 (ENSGEVG00005007976) #7	GOLGA4 (ENSGEVG00005007851) #9	LRRFIP2 (ENSGEVG00005007812) #10	MLH1 (ENSGEVG00005007779) #12	TRANK1 (ENSGEVG00005007646) #15	DCLK3 (ENSGEVG00005007528) #17	STAC (ENSGEVG00005007453) #18	ARPP21 (ENSGEVG00005007143) #19	ENSGEVG00005006936 #20	CLASP2 (ENSGEVG00005006619) #21	UBP1 (ENSGEVG00005006457) #22	FBXL2 (ENSGEVG00005006159) #23	SUSD5 (ENSGEVG00005006099) #24	CRTAP (ENSGEVG00005006056) #25	GLB1 (ENSGEVG00005005944) #26	CCR4 (ENSGEVG00005005922) #27	CX3CR1 (ENSGEVG00005005902) ##27	ENSGEVG00005005881 ##27	ENSGEVG00005005850	SLC25A38 (ENSGEVG00005005829)	ENSGEVG00005005790	TMC2 (ENSGEVG00005005665)	ENSGEVG00005005611	ENSGEVG00005005596	EIF1B (ENSGEVG00005005572)	CCK (ENSGEVG00005005553)
Emydidae	ANCESTRAL SPECIES	40	ENSGT00390000001455	ENSGT00940000155331.A	ENSGT00390000005586	ENSGT00940000161762	ENSGT00940000159827	ENSGT00940000156503 #7	ENSGT00730000111139 #9	ENSGT00530000063564.a #10	ENSGT00800000124177 #12	ENSGT00940000153370.b #15	ENSGT00940000159476 #17	ENSGT00950000183092.b.b #18	ENSGT00940000160796 #19	ENSGT00940000163083 #20	ENSGT00940000155574.C #21	ENSGT00940000156148 #22	ENSGT00940000153845.a.b #23	ENSGT00390000009163 #24	ENSGT00940000153814.a #25	ENSGT00950000182942.a.a #26	ENSGT01020000230359.C.b #27	ENSGT01020000230359.A ##27	ENSGT01020000230359.B.c.e ##27	ENSGT00940000164532	ENSGT00550000075117	ENSGT00950000183099.v	ENSGT01050000244942.b.a.b	ENSGT00950000183138.a.a.b	ENSGT00390000005489.b	ENSGT00940000160239	ENSGT00390000003571
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	2238	ENSTMTG00000009438	ENSTMTG00000009427	ENSTMTG00000009416	ENSTMTG00000009409	ENSTMTG00000009388	ENSTMTG00000009099 #7	ENSTMTG00000008982 #9	ENSTMTG00000008959 #10	ENSTMTG00000008791 #12	ENSTMTG00000008744 #15	ENSTMTG00000008719 #17	ENSTMTG00000020540 #18	ENSTMTG00000020448 #19	ENSTMTG00000020379 #20	ENSTMTG00000015829 #21	ENSTMTG00000015409 #22	ENSTMTG00000015330 #23	ENSTMTG00000015302 #24	CRTAP (ENSTMTG00000015296) #25
Three-toed box turtle	MODERN SPECIES	2239	ENSTMTG00000022861	ENSTMTG00000022858	ENSTMTG00000022857	ENSTMTG00000022855	ENSTMTG00000022851 #7	ENSTMTG00000022844 #9	ENSTMTG00000022842 #9	ENSTMTG00000022840 #10	ENSTMTG00000022836 #12	ENSTMTG00000022821 #15	ENSTMTG00000022816 #17	ENSTMTG00000022807 #18	ENSTMTG00000022795 #19	ENSTMTG00000022782 #20	ENSTMTG00000015818 #21	ENSTMTG00000014079 #22	ENSTMTG00000014006 #23	ENSTMTG00000013992	ENSTMTG00000013975 #24
painted turtle	MODERN SPECIES	760	LSM5 (ENSCPBG00000013685)	PDE1C (ENSCPBG00000013665)	PPP1R17 (ENSCPBG00000013658)	ITPRID1 (ENSCPBG00000013648)	NEUROD6 (ENSCPBG00000013640)	ITGA9 (ENSCPBG00000013620) #7	GOLGA4 (ENSCPBG00000013597) #9	LRRFIP2 (ENSCPBG00000013573) #10	MLH1 (ENSCPBG00000013555) #12	TRANK1 (ENSCPBG00000013529) #15	DCLK3 (ENSCPBG00000013524) #17	STAC (ENSCPBG00000013521) #18	ARPP21 (ENSCPBG00000013513) #19	ENSCPBG00000013501 #20	CLASP2 (ENSCPBG00000013429) #21	UBP1 (ENSCPBG00000013401) #22	FBXL2 (ENSCPBG00000013396) #23
Chinese turtle	MODERN SPECIES	985															CLASP2 (ENSPSIG00000003459) #21	UBP1 (ENSPSIG00000003763) #22	ENSPSIG00000003806 #23	ENSPSIG00000003824 #23	ENSPSIG00000001201	SUSD5 (ENSPSIG00000003834) #24	CRTAP (ENSPSIG00000003851) #25	TMPPE (ENSPSIG00000001227)	GLB1 (ENSPSIG00000003914) #26	CCR4 (ENSPSIG00000001244) #27	ENSPSIG00000001280	CX3CR1 (ENSPSIG00000001297) ##27	ENSPSIG00000004101	ENSPSIG00000001322 ##27	ENSPSIG00000004121	SLC25A38 (ENSPSIG00000004137)	ENSPSIG00000004173